LOCUS       DALPQQ010000001        70118 bp    DNA     linear   BCT 22-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus strain K18-6-464
            SAMD00233528-rid16434743.denovo.001, whole genome shotgun sequence.
ACCESSION   DALPQQ010000001 DALPQQ010000000
VERSION     DALPQQ010000001.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMD00233528
            Sequence Read Archive: DRR236061
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 70118)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 70118)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001543423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001543423.1
            Genome Coverage       :: 77x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/22/2022 17:09:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,811
            CDSs (total)                      :: 2,743
            Genes (coding)                    :: 2,689
            CDSs (with protein)               :: 2,689
            Genes (RNA)                       :: 68
            rRNAs                             :: 2, 4, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 4, 2 (16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 54
            CDSs (without protein)            :: 54
            Pseudo Genes (ambiguous residues) :: 0 of 54
            Pseudo Genes (frameshifted)       :: 27 of 54
            Pseudo Genes (incomplete)         :: 27 of 54
            Pseudo Genes (internal stop)      :: 10 of 54
            Pseudo Genes (multiple problems)  :: 10 of 54
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..70118
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMD00233528-rid16434743.denovo.001"
                     /strain="K18-6-464"
                     /db_xref="taxon:1280"
                     /geo_loc_name="Japan: Niigata"
     gene            607..1824
                     /locus_tag="O7798_000001"
     CDS             607..1824
                     /locus_tag="O7798_000001"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002466541.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="site-specific integrase"
                     /protein_id="HDC2862282.1"
                     /translation="MWVREITKNKSTAYRYLERYTDPLTGKYKTVSVTRNKNNVRSQK
                     DAQLELNKIIEQRLKHNSTKQLEKLTFHDVCDEWLEHYKTHSGSKPTTIKEKKSNANT
                     VKNAIDSKVLISKITHTYLQNIINEWAKSHSIGHVQSLVIVIRSVFKYAFKYYDLHDI
                     SVLDKIDIPKKAQTRNELQAKRNNYLEDSEVKELLQCFDYLIKHKRHATRKRNYEMVK
                     ALVEFQINNGMRIGELLAIKKDNINYEDKTLDIDGTINWVTDKETGAFGVKETTKTSK
                     SYRTIGLTTQSINLLKTLILDNKKENQWNEDFIDRGYVFTNTAGSPIDLNKVNSIIKE
                     ATEISSINKRVTTHTLRHTHISTLAQLGINLKAIQDRVGHSDYKTTLEIYTHVTDQMA
                     KDMMNKLEEANKI"
     gene            2307..3137
                     /locus_tag="O7798_000002"
                     /pseudo
     CDS             2307..3137
                     /locus_tag="O7798_000002"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000357935.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="KilA-N domain-containing protein"
     gene            complement(3319..3561)
                     /gene="rpsR"
                     /locus_tag="O7798_000003"
     CDS             complement(3319..3561)
                     /gene="rpsR"
                     /locus_tag="O7798_000003"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002484306.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S18"
                     /protein_id="HDC2862283.1"
                     /translation="MAGGPRRGGRRRKKVCYFTANGITHIDYKDTELLKRFISERGKI
                     LPRRVTGTSAKYQRMLTTAIKRSRHMALLPYVKEEQ"
     gene            complement(3613..4116)
                     /gene="ssb"
                     /locus_tag="O7798_000004"
     CDS             complement(3613..4116)
                     /gene="ssb"
                     /locus_tag="O7798_000004"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498938.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="single-stranded DNA-binding protein"
                     /protein_id="HDC2862284.1"
                     /translation="MLNRVVLVGRLTKDPEYRTTPSGVSVATFTLAVNRTFTNAQGER
                     EADFINCVVFRRQADNVNNYLSKGSLAGVDGRLQSRNYENQEGRRVFVTEVVCDSVQF
                     LEPKNAQQNGGQRQQNEFQDYGQGFGGQQSGQNNSYNNSSNTKQSDNPFANANGPIDI
                     SDDDLPF"
     gene            complement(4137..4433)
                     /locus_tag="O7798_000005"
     CDS             complement(4137..4433)
                     /locus_tag="O7798_000005"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001831345.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S6"
                     /protein_id="HDC2862285.1"
                     /translation="MRTYEVMYIVRPNIEEDAKKALVERFNGILATEGAEVLEAKDWG
                     KRRLAYEINDFKDGFYNIVRVKSDNNKATDEFQRLAKISDDIIRYMVIREDEDK"
     gene            4677..4868
                     /locus_tag="O7798_000006"
     CDS             4677..4868
                     /locus_tag="O7798_000006"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498936.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDC2862286.1"
                     /translation="MNLNIDWSKDFQEFQEILNSGIHPEWLYCAKANLVLEPAYTGEG
                     KQFFSTQDIINASKIIPFF"
     gene            complement(4954..6051)
                     /gene="ychF"
                     /locus_tag="O7798_000007"
     CDS             complement(4954..6051)
                     /gene="ychF"
                     /locus_tag="O7798_000007"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019469841.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="redox-regulated ATPase YchF"
                     /protein_id="HDC2862287.1"
                     /translation="MALTAGIVGLPNVGKSTLFNAITKAGALAANYPFATIDPNVGIV
                     EVPDARLLKLEEMVQPKKTLPTTFEFTDIAGIVKGASKGEGLGNKFLSHIREVDAICQ
                     VVRAFDDDNVTHVAGRVDPIDDIEVINMELVLADLESVEKRLPRIEKLARQKDKTAEM
                     EVRILTTIKEALENGKPARSIDFNEEDQKWVNQAQLLTSKKMLYIANVGEDEIGDDDN
                     DKVKAIREYAAQEDSEVIVISAKIEEEIATLDDEDKEMFLEDLGIEEPGLDRLIRTTY
                     ELLGLSTYFTAGVQEVRAWTFKQGMTAPQCAGIIHTDFERGFIRAEVTSYDDYVQYGG
                     ESGAKEAGRQRLEGKEYIMQDGDIVHFRFNV"
     gene            complement(6063..6266)
                     /locus_tag="O7798_000008"
     CDS             complement(6063..6266)
                     /locus_tag="O7798_000008"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498934.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF951 domain-containing protein"
                     /protein_id="HDC2862288.1"
                     /translation="MASKYGINDIVEMKKQHACGTNRFKIIRMGADIRIKCENCQRSI
                     MIPRQTFDKKLKKIIESHDDTQR"
     gene            complement(6296..7177)
                     /locus_tag="O7798_000009"
     CDS             complement(6296..7177)
                     /locus_tag="O7798_000009"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498933.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="mechanosensitive ion channel family protein"
                     /protein_id="HDC2862289.1"
                     /translation="MNQVMNIISSLFEPLTKIETYENIATKIAMIVIYIIVALIVIKI
                     LNKMIEQGFKIQNKSKKSNKKRSKTLISLVQNVVKYIVWFIVITTILSKFGISVEGVI
                     ASAGVVGLAVGFGAQTIVKDVITGFFIIFESQFDVGDYVKINNGGTTVAEGTVKSIGL
                     RSTRINTISGELTILPNSSMGEITNYSITNGTAIVKIPVSVEENIDNVDKKLNKLFTS
                     LRSKYYLFVSDPVVIGIDAIEDTRVILRISAETIPGEGFAGARIIRKEVQKMFLQEGI
                     KTPQPIMTAYNHSENGV"
     gene            complement(7334..8179)
                     /locus_tag="O7798_000010"
     CDS             complement(7334..8179)
                     /locus_tag="O7798_000010"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498932.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ParB/RepB/Spo0J family partition protein"
                     /protein_id="HDC2862290.1"
                     /translation="MSELSKSEDQRITKTKDEQIKQIDISDIKPNPYQPRKTFDENHL
                     NDLADSIKQYGILQPIVLRKTVQGYYIVVGERRFRASKIAGLKYVSAIIKDLTDEDMM
                     ELAVIENLQREDLNAIEEAESYQRLMTDLKITQQEVAKRLSKSRPYIANMLRLLHLPK
                     KIADMVKDGRLTSAHGRTLLAIKDEQQMLRLAKRVVKEKWSVRYLENHVNELKNVSSK
                     SETDKVDITKPKFIKQQERQLREQYGTKVDISIKKSVGKISFEFDSQEDFVRIIEQLN
                     RRYGK"
     misc_binding    8408..8777
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00230"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="T-box leader; Derived by automated computational
                     analysis using gene prediction method: cmsearch."
                     /bound_moiety="tRNA"
                     /db_xref="RFAM:RF00230"
     gene            8843..9946
                     /locus_tag="O7798_000011"
     CDS             8843..9946
                     /locus_tag="O7798_000011"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498931.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class I/II-fold pyridoxal
                     phosphate-dependent enzyme"
                     /protein_id="HDC2862291.1"
                     /translation="MKDTQLAQITLTDDSTGAIANPIHLSTAYKHPKLGQSTGFDYTR
                     TKNPTRSTFETCFAKLEHGIASFATSSGMSAIQLICNLFKPHDEILVSFDLYGGTFRL
                     FEFYEQQYDIKFKYVDFTDYEQVEKEITDKTVALFIEPISNPQMIAIDVKPYYQLCKA
                     KGLLSIIDNTFLTPYLSTPLAEGADIVLHSATKYIGGHNDVLAGVVTVKDESLAQQLF
                     DFHNMTGATLSPIDSYLLLRGLKTLHLRIERAQSNARKLAKKCQSLQAIDEVLYSGQT
                     GMLSLRLNKAYSVAKLLENLDICIFAESLGGTETLVTFPYTQTHVDMPDAEKDKRGID
                     EYLIRLSLGVENYEDIERDIIQALDKAQIGEIV"
     gene            9943..11103
                     /locus_tag="O7798_000012"
     CDS             9943..11103
                     /locus_tag="O7798_000012"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498930.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PLP-dependent transferase"
                     /protein_id="HDC2862292.1"
                     /translation="MTLSKETEVIFDWRRGVEYHSANPPLYDSSTFHQTSLGGDVKYD
                     YARSGNPNRELLEEKLARLEQGKFAFAFASGIAAISAVLLTFKSGDHVILPDDVYGGT
                     FRLTEQILNRFNIEFTTVDTTKLEQIEGAIQSNTKLIYIETPSNPCFKITDIKAVSKI
                     AEKHELLVAVDNTFMTPLGQSPLLLGADIVIHSATKFLSGHSDLIAGAVITNNEAISD
                     ALYLIQNGTGNMLSAQDSWTLAKHLKTFPIRFKQSVENAQKIVSFLIKQDEISEVYYP
                     GLTTAHLEQAKNGGAVIGFRLADESKAQQFVDALTLPLVSVSLGGVETILSHPATMSH
                     AALPEEVRQERGITFGLFRLSVGLEDPDELIADIKYALKEAFNESIPHTIER"
     gene            11072..12913
                     /locus_tag="O7798_000013"
     CDS             11072..12913
                     /locus_tag="O7798_000013"
                     /EC_number="1.5.1.20"
                     /EC_number="2.1.1.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498929.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional homocysteine
                     S-methyltransferase/methylenetetrahydrofolate reductase"
                     /protein_id="HDC2862293.1"
                     /translation="MSQFLTQLKDNVLVADGAIGTILYSEGLDTCPEAYNLSHPDKVE
                     RIHRSYIEAGADVIQTNTYGANFEKLKRFGLEDKVKAIHQAAVRIAKKAANKDTYILG
                     TVGGFRGIKQEDISLQTILYHTEIQIDTLIEEGVDALLFETYYDLEELTNVISRTRKK
                     YDIPIIAQLTASNTNYLVNGQAINEGLKQLVQCGANIVGLNCHHGPHHMQESFTHIEL
                     PEHAFLSCYPNASLLDIENSEFKYSDNAQYFGQVAQNLIREGVRLIGGCCGTTPEHIK
                     FIKESIQTLKPVNDKKVIPIPTKALFNPSQNKVRQSLTSKVQERPTVIIELDTPKHLD
                     TDRFFENIAKLDKANVDAVTLADNSLATVRISNIAAASLIKQYYNIEPLVHITCRDRN
                     LIGLQSHLLGLSLIGVNEILAITGDPSKVGHLPGATNVYDVNSKGLTELALRFNQGIN
                     TDGDALKKRTHFNIAGAFNPNVRKLYGAVKRLEKKIESGMSYFITQPVYSKEKIIEIY
                     HATKHLNKPFFIGIMPIASYKNALFLHNEVPGIKMSDEILQQFEAVKDDKAKTRELSL
                     KLSKDLIDTVHEYFNGLYIITPFQNVEDSLELAAYSKSITAHKEAIL"
     gene            12910..15138
                     /gene="metE"
                     /locus_tag="O7798_000014"
     CDS             12910..15138
                     /gene="metE"
                     /locus_tag="O7798_000014"
                     /EC_number="2.1.1.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498928.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5-methyltetrahydropteroyltriglutamate--
                     homocysteine S-methyltransferase"
                     /protein_id="HDC2862294.1"
                     /translation="MTTIKTSNLGFPRLGRKREWKKAIESYWAKKISKEELDQTLTDL
                     HKENLLLQKYYHLDSIPVGDFSLYDHILDTSLLFNIIPERFQGRTIDDDLLFDIARGN
                     KDHVASALIKWFNTNYHYIVPEWDNVEPKVSRNVLLDRFKYAQSLNVNAHPVIVGPIT
                     FVKLSKGGHQTFEEKVKTLLPLYKEVFESLIDAGAEYIQVDEPILVTDDSESYENITR
                     EAYDYFEKAGVAKKLVIQTYFERAHLKFLSSLPVGGIGLDFVHDNGYNLKQIEAGDFD
                     KSKTLYAGIIDGRNVWASDIEAKKVLIDKLLAHTNELVIQPSSSLLHVPVSLDDETLD
                     TSVGEGLSFATEKLDELDALRRLFNQNDSVKYDKLKARYERFQNQSFKNLDYDFESVR
                     TSRQSPFAQRIEQQQKRLNLPDLPTTTIGSFPQSREVRKYRADWKNKRITDEAYETFL
                     KNEIARWIKIQEDIGLDVLVHGEFERNDMVEFFGEKLQGFLVTKFGWVQSYGSRAVKP
                     PIIYGDVKWTAPLTVDETVYAQSLTDKPVKGMLTGPVTILNWSFERVDLPRKVVQDQI
                     ALAINEEVLALEAAGIKVIQVDEPALREGLPLRSEYHEQYLKDAVLSFKLATSSVRDE
                     TQIHTHMCYSQFGQIIHAIHDLDADVISIETSRSHGDLIKDFEDINYDLGIGLGVYDI
                     HSPRIPTKEEITTAINRSLQQIDRSLFWVNPDCGLKTRKEEEVKDALTVLVNAVKAKR
                     QE"
     gene            15181..15933
                     /locus_tag="O7798_000015"
     CDS             15181..15933
                     /locus_tag="O7798_000015"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498927.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cyclase family protein"
                     /protein_id="HDC2862295.1"
                     /translation="MTQYPLWQQLNTLKQATWVDLTHTFDPEIPRFSEFEKGEVSTLF
                     TVKDHGFYVQRWNIVTQYGTHIDAPIHFVENKRYLEDIDLKELVLPLIVLDFSTEVAN
                     NNDFIVTRAHIEAWEKEHGTIEPGTFVALRTDWSKRWPNIEKFENKDANGQQHAPGWG
                     LDALKYLIEERRVEAVGHETFDTDASVDVVKNGDLVGERYILGQDKYQVELLTNLDQL
                     PTRGAIIYAISPKPKDAPGFPVRAFAIKPSND"
     gene            complement(16016..17197)
                     /locus_tag="O7798_000016"
     CDS             complement(16016..17197)
                     /locus_tag="O7798_000016"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498926.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA C-acetyltransferase"
                     /protein_id="HDC2862296.1"
                     /translation="MTRVVLAAAYRTPIGVFGGAFKDVPAYDLGATLIEHIIKETGLN
                     PSEIDEVIIGNVLQAGQGQNPARIAAMKGGLPETVPAFTVNKVCGSGLKSIQLAYQSI
                     VTGENDIVLAGGMENMSQSPMLVNNSRFGFKMGHQSMVDSMVYDGLTDVFNQYHMGIT
                     AENLVEQYGISREEQDTFAVNSQQKAVRAQQNGEFDSEIVPVSIPQRKGEPIVVTKDE
                     GVRENVSVEKLSRLRPAFKKDGTVTAGNASGINDGAAMMLVMSEDKAKELNIEPLAVL
                     DGFGSHGVDPSIMGIAPVGAVEKALKRSKKELSDIDVFELNEAFAAQSLAVDRELKLP
                     PEKVNVKGGAIALGHPIGASGARVLVTLLHQLNDEVETGLTSLCIGGGQAIAAVVSKY
                     K"
     gene            17736..18869
                     /locus_tag="O7798_000017"
     CDS             17736..18869
                     /locus_tag="O7798_000017"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498924.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="low temperature requirement protein A"
                     /protein_id="HDC2862297.1"
                     /translation="MVNALTPKHLAEKRAGFHELFFDLIFVYAIQKIAHVILTTQNGS
                     ISADLFFKYIVMSLFLWLMWSHQTFFTNRFGQVTFKDVSFMMFNMFIMVFLSNSLYPD
                     FEKTFFPFFLCVAIMYLSIGLQYLLHIRTGLDYGDKRTCQAFASVAFVISFLSFLSLV
                     LPQSIHYIPGFLGVFIAATGLIPFQKYLVLSPVNMMHLVERFSLLTIIIFGEVLVGLA
                     SSSFSIDHFSYIYIFQFMILISLFGVYWIITENYINHKLTSIGFRLSYTHLLINIALG
                     VINAAIVFSNNNKLNDLFEINMMYISVLIFYIGLWLITPYFHNELTNAKYISYSLGIL
                     VMSYIVSLLFKGHDHVMIISVSVATFCIMLIYFKNQRLRNKHE"
     gene            complement(19236..19865)
                     /locus_tag="O7798_000018"
     CDS             complement(19236..19865)
                     /locus_tag="O7798_000018"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498923.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC-2 transporter permease"
                     /protein_id="HDC2862298.1"
                     /translation="MKGMFLSSFYATRKQTYIYFIVAIIAAGYFAVFNPLMSSAMAGV
                     MLITPITDNIKHEKDSRWMYYVSTLPVKRSDYIKSYFAFYLILFGASLMIGLVVTTIV
                     TQSVMIGIMSGLMSFGIIGAYSIIFPLTFKFGAENSNVIMICASILLLISFVVFFFIY
                     GMVSGASALEFEKISTEGWLVVIAYAVIGIVITSVSYILSIKIFNKQEL"
     gene            complement(19865..20707)
                     /locus_tag="O7798_000019"
     CDS             complement(19865..20707)
                     /locus_tag="O7798_000019"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498922.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HDC2862299.1"
                     /translation="MTTLLNVDSVNKQYKDSDFKLQDASLTISTNETVGLIGKNGSGK
                     STLINILVGNRHKDNGSITFFGEEHTVDDVEYKEHIGVVFDDLRVPNKLTIKDIDKVF
                     QSIYMTWNSQKFFDLIKYFELPLQTKIKTFSRGMRMKIALTIALSHDVKLLILDEATA
                     GMDVSGREEVMEILEDFVAQGGGILISSHISEDIEHLADKLVFMKDGRMILTEQKDIL
                     LAQYGIVTTEDKDVEIPKHLIIASRLSKGKYQILVKDYAEIENAEPLKHIDDATKIIM
                     RGEV"
     gene            complement(20732..21445)
                     /locus_tag="O7798_000020"
     CDS             complement(20732..21445)
                     /locus_tag="O7798_000020"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498921.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3169 family protein"
                     /protein_id="HDC2862300.1"
                     /translation="MKILRYIGYLLLGGLVGGIIGGILGNFDGFGIENLTFATYNNVV
                     VISIVATIIIILVEAIVLMNQRRALKYKQLVDKEVDIDATDQYELLANRYVLNGSILS
                     ILQTVIAFLVLLIFVVGHAAANAILFFLIPFFASAIFNTQFTLFNRRFDDRIPKIADK
                     NYTEKRLEILDEGERHIELIALFKTYAINLSILILAIVVIGLYSITTGINQSFSLLLI
                     IAIFIYNAFSYLLKRRRFY"
     gene            complement(21442..21645)
                     /locus_tag="O7798_000021"
     CDS             complement(21442..21645)
                     /locus_tag="O7798_000021"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498920.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HDC2862301.1"
                     /translation="MRNRLKELRARDGLNQTQLAKQAGVSRQTISLIERNNFMPSVLT
                     AIKIARIFNETVETVFIIEEDEA"
     gene            21886..22275
                     /locus_tag="O7798_000022"
     CDS             21886..22275
                     /locus_tag="O7798_000022"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498919.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1398 family protein"
                     /protein_id="HDC2862302.1"
                     /translation="MAFTLSAIQQAHQQFTGVDFPKLFKAFKDMGMTYNIVNIQDGTA
                     TYVHQSEDDIVTSSVKSNHPVAQKSNKTIVQDVLTRHQQGQTDFETFCDEMAEAGIYK
                     WHIDIQAGTCTYIDLQDQAVISELIPQ"
     gene            22375..22599
                     /locus_tag="O7798_000023"
     CDS             22375..22599
                     /locus_tag="O7798_000023"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498918.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="twin-arginine translocase TatA/TatE family
                     subunit"
                     /protein_id="HDC2862303.1"
                     /translation="MIIMITNTFILGITGPTSLVVISIIALIIFGPKKLPQFGRAIGS
                     TLKEFKSATEDLDKESHDTPSKESKQQREQ"
     gene            22616..23317
                     /gene="tatC"
                     /locus_tag="O7798_000024"
     CDS             22616..23317
                     /gene="tatC"
                     /locus_tag="O7798_000024"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006191819.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="twin-arginine translocase subunit TatC"
                     /protein_id="HDC2862304.1"
                     /translation="MVHFSELRHRLVKILLSFVITVIVVYVSSFWWMTPFITYITRAH
                     VSLHAFSFTEMIQIYVMIIFFIAFCFISPVMFYQLWAFIAPGLHNNERQFIYKYSFFS
                     VLLFCAGVAFAFYVGFPMIIQFALKLSLTLNISPVIGFKAYLIELIRWLFTFGLLFQL
                     PILFMGLAKFGLIDTTSLKHYRKYIYFACFVLASIIAPPDLTLNILLTLPLILLFEFS
                     MFIVKFTCRGKPPTH"
     gene            complement(23410..25122)
                     /locus_tag="O7798_000025"
     CDS             complement(23410..25122)
                     /locus_tag="O7798_000025"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000683714.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FTR1 family protein"
                     /protein_id="HDC2862305.1"
                     /translation="MKHYLTKFVAMLITAAMVCSFGLLKSQAAEQQSISDVYSVITDA
                     KSALSNNSISNDNKQKAIEQVVSAVKKLSLEDNSESNAVKSDVRKLEDAKANDNQKDT
                     LSQLTKSLIAYEEKLASKDAGSKIKLLQQQVDAKDAAMTKAIKDKNKAELESLNNSLN
                     QIWTSNETVIRNYDANQYGQIEVALLQLRIAIHKSPLDTAKVSHAWTTFKSNIDHVDK
                     KSNTSANDQYHVSQLNDALEKAIKAIDDNQLSDADAALTHFIETWPYVEGQIQTKDGA
                     LYTKIEDKIPYYQSVLDEHNKAHVKDGLVDLNNQIKEVVGHSYSFVDVMIIFLREGLE
                     VLLIVMTLTTMTRNVKDKKGTASVIGGAIAGLVLSIILAITFVETLGNSGILRESMEA
                     GLGIVAVILMFIVGVWMHKRSNAKRWNDMIKNMYANAISNGNLVLLATIGLISVLREG
                     VEVIIFYMGMIGELATKDFIIGIALAIVILIIFALLFRFIVKLIPIFYIFRVLSIFIF
                     IMGFKMLGVSIQKLQLLGAMPRHVIEGFPTINWLGFYPSYEPLIAQGAYIMVVAILIF
                     KFKK"
     gene            complement(25103..26332)
                     /gene="efeB"
                     /locus_tag="O7798_000026"
     CDS             complement(25103..26332)
                     /gene="efeB"
                     /locus_tag="O7798_000026"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498915.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="deferrochelatase/peroxidase EfeB"
                     /protein_id="HDC2862306.1"
                     /translation="MTNYEQVNDSTQFSRRTFLKMLGIGGAGVAIGASGVGSMWSFKS
                     MFNTPEDPEKDAYEFYGKVQPGITTPTQKTCNFVALDLKSKDRDAIKAMFKKWTVMAD
                     RMMDGDTVGKPSNNPLMPPVDTGESIGLGASKLTITFGISKSLMKKIGLSSKIPDAFK
                     DLPHFPNDQLIDDYSDGDIMIQACSNDSQVSFHAVHNLVRPFRDIVKVRWAQSGFISA
                     KGKETPRNLMAFKDGTINPRKNNQLKDYVFIDDGWAKHGTYCVVRRIQIHIETWDRTA
                     LEEQEATFGRKRHSGAPLTGGKEFDEIDLKAKDSHGEYIIDKDAHTRLAKEANTSILR
                     RAFNYVDGTDDRTGNFETGLLFIAFQKATKQFIDIQNNLGSNDKLNEYITHRGSASFL
                     VLPGVSKGGYLGETLFD"
     gene            complement(26329..27183)
                     /locus_tag="O7798_000027"
     CDS             complement(26329..27183)
                     /locus_tag="O7798_000027"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498914.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDC2862307.1"
                     /translation="MKKLTTLLLASTLLIAACGNDDSKKDDSKTSKKDDGVKAELKQA
                     TKAYDKYTDEQLNEFLKGTEKFVKAIENNDMAQAKALYPKVRMYYERSEPVAEAFGDL
                     DPKIDARLADMKEEKKEKEWSGYHKIEKALYEDKKIDDVTKKDAQQLLKDAKELHAKA
                     DTLDITPKLMLQGSVDLLNEVATSKITGEEEIYSHTDLYDFKANVEGAQKIYDLFKPI
                     LEKKDKKLSDDIQMNFDKVNQLLDKYKDNNGGYESFEKVSKKDRKAFADAVNALGEPL
                     SKMAVITE"
     gene            complement(27451..27996)
                     /locus_tag="O7798_000028"
     CDS             complement(27451..27996)
                     /locus_tag="O7798_000028"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498913.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HDC2862308.1"
                     /translation="MFGMKVNEQITLKILEAHDTEALFNLVNRSRNSLREWLPWVDAT
                     EQPSDTRAFIKRGLLQFADGNGFQCGIWYEGTLVGVIGLHEINHMHRKTSLGYYLDKE
                     FEGHGIMTQAVEALIKYCFEELDLNRIEISAAVNNEKSRAIPERLGFTREGMLRDNEL
                     LNGIYSSSYIYSLLKSEYDQK"
     gene            28415..29410
                     /locus_tag="O7798_000029"
     CDS             28415..29410
                     /locus_tag="O7798_000029"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498911.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YeiH family protein"
                     /protein_id="HDC2862309.1"
                     /translation="MASLKNKHFMIGLSLTFIVALFSFLAAKLPILDKVGALTIAILI
                     AILYRHFRGYPEQYSSGITFSSKYLLRFAIILYGLKLNIFDIIGQGSKLLAIDVGVVI
                     FSIVMMLFVNKLLHGDKNIALLLGVGTGVCGAAAIAAVAPIFKSREKDTAISIGIIAL
                     IGTIFSLIYTAIYAIFSMTTNVYGAWSGVSLHEIAHVVLAGGFGGSDALKIALLGKLG
                     RVFLLIPLTIVLILIMRFRSSESSSKGRISIPYFLIGFVIMALVNTYVTIPSALLNIL
                     NTVSTICLLMAMVALGLNVAFKDLKNRALKPLMTIIITSICLSSLAFIVVHWLYS"
     gene            complement(29470..30036)
                     /locus_tag="O7798_000030"
     CDS             complement(29470..30036)
                     /locus_tag="O7798_000030"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498910.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H-dependent oxidoreductase"
                     /protein_id="HDC2862310.1"
                     /translation="MNIVLLSGSTVGSKTRIAMDDLKNELEVINEGHQIELMDLRELE
                     LEFSVGKNYLDTTGDVYKLTTSLMQADVIFIGFPIFQASIPGALKNVFDLLPVNAFRD
                     KVIGLVATAGSSKHYLIPEMHLKPILSYMKAHTMQTYVFIEEKDFSNQQIVNDDVVFR
                     LKALAQSTMRTAKVQQQVFEEENNQYDF"
     gene            complement(30050..31111)
                     /locus_tag="O7798_000031"
     CDS             complement(30050..31111)
                     /locus_tag="O7798_000031"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498909.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LLM class flavin-dependent oxidoreductase"
                     /protein_id="HDC2862311.1"
                     /translation="MAKLEMNKNTPLEFGLYSLGDHLLNPLKGEKVSYEQRINEIIEA
                     SKLADEAGIDVFAVGESHQEHFTTQAHTVVLGAIAQATKHIKVSSSSTIISATDPVRV
                     FEDFATLDLISHGRAEIVAGRASRTGIFDLFGYDLKDYDELFEEKLGLLLELNKTERI
                     TWSGKYRPELRNMKIFPRPIDNILPIWRAVGGPPASAIKAGKQGVPMMITTLGGPAMN
                     FKGSIDAYRQAATEAGFDASPKSLPVSTASLFYTAETTQDAMREFYPHLNTGMSFIRG
                     VGYPKQQFANSSDYREALMVGSPQQIIEKILYQHELYGHQRFMAQLDFGGVPFENVMK
                     NIELIGNDIIPAIKKHLSK"
     gene            complement(31125..32051)
                     /locus_tag="O7798_000032"
     CDS             complement(31125..32051)
                     /locus_tag="O7798_000032"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498908.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HDC2862312.1"
                     /translation="MNIVGHHHISMYTKDAKRNKDFYTNVLGLRLVEKSVNQDNPSMY
                     HLFYGDEVGTAGTILSFFEIPNAGHKQPGTETIYRFSLLVPNQAALHYFEKRLENNGI
                     KSERLYYLGQEGVVFKDEDDLEIILLVNDSFEVPHQWQHNAYSEIPQAYQILGIGPVE
                     LRVRNAARTVEFLENVLDYRKRDNKSFDVLTLAPQGLYSDFVVIEQQGQRERPGRGYI
                     HHIAVNTPQMSDLDAIYKKLQQQPQSNSGIIDRYFFKSLYYRHNSIMYEFATEAPGFT
                     IDTPVEQLGSQLNLPDFLEAEREQIESKLHEI"
     gene            32359..33717
                     /gene="glpT"
                     /locus_tag="O7798_000033"
     CDS             32359..33717
                     /gene="glpT"
                     /locus_tag="O7798_000033"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498907.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycerol-3-phosphate transporter"
                     /protein_id="HDC2862313.1"
                     /translation="MNFLKPAKHIKPLPENQIDDTYKRLRLQVFLGIFIGYAGYYLLR
                     KNFSLAMPALQEQGFTKAELGFALSAVSIAYGFSKFFMGTVSDRSNARIFLVLGLALT
                     AIVNLLMGFVPFFTSGIGIMFVLLFLNGWFQGMGWPPSGRVLVHWFSVSERGSKTALW
                     NVAHNVGGGIMAPIAAWGITTTAFINFGYLKGFEGVFIYPALLALIIAAISYVLIRDT
                     PQSQGLPPIEIYKNDFATSDKKTLETELTTKEILFKYVLNNKWVWAIAFANIFVYFVR
                     YGVLDWAPVYLSEEKHFDLKASGWAYFLYEWAGIPGTLLCGYISDKLFKGRRGPAGFF
                     FMLGVTVFVLIYWLNPPGNAWLDNVSLIAIGFLIYGPVMLIGLQALDYVPKKAAGTAA
                     GLTGLFGYLFGAVMANIVLGAVVDKFGWDVGFILLTAISVFAMLSFILTWNKVGQETV
                     HH"
     gene            complement(33800..34240)
                     /locus_tag="O7798_000034"
     CDS             complement(33800..34240)
                     /locus_tag="O7798_000034"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498906.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MepB family protein"
                     /protein_id="HDC2862314.1"
                     /translation="MCKSKILLKNIFSEESEVKDLTEEKYNQDYEALTFSFKEETYQS
                     RLAKKTPTKSGYFVTCWTKDEDNYNRPYKIEEFADYLIVAVIDDELNGYFLFPRELLV
                     EKGILASSKYQGKMAFRVYPKWCNQLNKTAGQTQKWQCKYFFEY"
     gene            complement(34344..35699)
                     /gene="mepA"
                     /locus_tag="O7798_000035"
     CDS             complement(34344..35699)
                     /gene="mepA"
                     /locus_tag="O7798_000035"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498905.1"
                     /note="MepA (multidrug export protein A), as described
                     originally in Staphylococcus aureus, is a MATE transporter
                     shown to be over-expressed after culturing in the presence
                     of tigecycline, owing to mutation of its repressor MepR,
                     and then to be one of several factors contributing to
                     elevated tigecycline resistance; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux MATE transporter MepA"
                     /protein_id="HDC2862315.1"
                     /translation="MKDEQLYYFEKSPVFKAMMHFSLPMMIGTLLSVIYGILNIYFIG
                     FLEDSHMISAISLTLPVFAILMGLGNLFGVGAGTYISRLLGAKDYSKSKFVSSFSIYG
                     GIALGLIVILVTLPFSDQIAAILGARGETLALTSNYLKVMFLSAPFVILFFILEQFAR
                     AIGAPMVSMIGMLASVGLNIILDPILIFGFDLNVVGAALGTAISNVAAALFFIIYFMK
                     NSDVVSVNIKLAKPNKEMLSEIFKIGIPAFLMSILMGFTGLVLNLFLAHYGNFAIASY
                     GISFRLVQFPELIIMGLCEGVVPLIAYNFMANKGRMKDVIKAVIMSIGVIFVVCMSAV
                     FTIGHHMVGLFTTDQAIVEMATFILKVTMASLLLNGIGFLFTGMLQATGQGRGATIMA
                     ILQGAIIIPVLFIMNALFGLTGVIWSLLIAESLCALAAMLIVYLLRDRLTVDTSELIE
                     G"
     gene            complement(35806..36225)
                     /gene="mepR"
                     /locus_tag="O7798_000036"
     CDS             complement(35806..36225)
                     /gene="mepR"
                     /locus_tag="O7798_000036"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498904.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux transporter transcriptional
                     repressor MepR"
                     /protein_id="HDC2862316.1"
                     /translation="MEFTYSYLFRMISHEMKQKADQKLEQFDITNEQGHTLGYLYAHQ
                     QDGLTQNDIAKALQRTGPTVSNLLRNLERKKLIYRYVDAQDTRRKNIGLTTSGIKLVE
                     AFTSIFDEMEQTLVSQLSEEENEQMKANLTKMLSSLQ"
     gene            36437..38392
                     /locus_tag="O7798_000037"
     CDS             36437..38392
                     /locus_tag="O7798_000037"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498903.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BglG family transcription antiterminator"
                     /protein_id="HDC2862317.1"
                     /translation="MLSYRQIEILYLLIHEQTFIPINTIANQLGVSPRTIQYDIAYIE
                     QYAETYHYQVSRNKAAGIKVTTAHATLLNELEHNLTNQIHFSKDERLTHIALKLFETT
                     DPVSTKQLAQDVNVSRRTIADDIKMIQAQLDQYHLKLNYVHNKGFNIIGEEDHYRKAY
                     AHFIHQYMKQAAPFIEADIFNSESIALVRRAIIKTLNSENYHLVQSAIDGLIYHILIA
                     IQRLNENFSFDIPINEIDKWRHTNQYAIASKMIENLERSCNVTFPESEIIFITLHLLG
                     SKMTEHTASSITFEYHDLSQNIHELITCVSQELGIDMSKDNKLHTSLITHIKPAIHRI
                     KYDMLQPNPLRQEVMRRYPQIIEAVSKHISPIEQDAAIRFNEDELTYITIHFASSIER
                     VATHKQSMIKVVLLCGSGIGTSQLLKSKLNHLYPEFHIWDAYSIYQLEESRLLQDNID
                     YVISTVPCEISAVPVIHVDPFINQQSRQKLNQIINDSREQRVMKMATDGKSLADLLPE
                     HRIIINKQPLSIESAIAVAVQPLINDGIVYSNYTAAILKQFEQFGSYMVISPHIALIH
                     AGTDYVQNGVGFALTYFTEGIIFGSKANDPVHLVITLATDHPNAHLKALGQLSECLSN
                     DLYRQDFLDGNIFKIKQHIALTMTKEA"
     gene            38397..38840
                     /locus_tag="O7798_000038"
     CDS             38397..38840
                     /locus_tag="O7798_000038"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498902.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS sugar transporter subunit IIA"
                     /protein_id="HDC2862318.1"
                     /translation="MSLDILSTTRIIVKEQVNDWTEAITIASQPLLQEQIIEQGYVQA
                     MIDSVNELGPYIVIAPEIAIAHARPNNDVHQVGLSLLKLNQHVAFCDEDHYASLIFVL
                     SAIDNHSHLSVLQNLATVLGDNQTVQQLLTATNAQDIKNILKEHD"
     gene            38842..39126
                     /locus_tag="O7798_000039"
     CDS             38842..39126
                     /locus_tag="O7798_000039"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498901.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS sugar transporter subunit IIB"
                     /protein_id="HDC2862319.1"
                     /translation="MKILVVCGHGLGSSFMVEMNAQEALRQLNAPSDIEVEHSDIMTA
                     SPEMADLFICGRDLAENAERLGDVLVLDNILDKAELQQKLSEKLQQLNMI"
     gene            39141..40487
                     /locus_tag="O7798_000040"
     CDS             39141..40487
                     /locus_tag="O7798_000040"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498900.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS ascorbate transporter subunit IIC"
                     /protein_id="HDC2862320.1"
                     /translation="MQAILNFIVDILSQPAILVALIAFIGLIVQKKPAATITSGTIKT
                     ILGFLILSAGADVVVRSLEPFGKIFQHAFGVQGIVPNNEAIVSLALKDFGTTAALIMV
                     CGMIVNILIARFTNLKYIFLTGHHTFYMAAFLAIILTVSHIKGWLTIVIGALVLGLIM
                     AVLPALLQPTMRKITGNDQVALGHFGSISYFAAGAVGQLFKGKSKSTEEIKFPKGLSF
                     LRESTISISITMALLYFIACLFAGVSYVHESISDGQNFIVFSLIQGVTFAAGVFIILT
                     GVRLILAEIVPAFKGISEKLVPNSKPALDCPIVFPYAQNAVLIGFFVSFITGVIGMFI
                     LFLFGGVVILPGVVAHFFLGATAAVFGNARGGIKGAIAGAALNGILITFLPLLFLPFL
                     GELGGAATTFSDTDFLAVGIVFGNAVKYMGLFGAILFIIIVGATTILLKGRQKEQQ"
     gene            complement(40580..41605)
                     /locus_tag="O7798_000041"
     CDS             complement(40580..41605)
                     /locus_tag="O7798_000041"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498899.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aldehyde reductase"
                     /protein_id="HDC2862321.1"
                     /translation="MNNKVLVTGGTGFVGMRIISRLLEQGYDVQTTIRDLSKADKVIK
                     TMQDNGISTERLMFVEADLSQDEHWDEAMKDCKYVLSVASPVFFGKTDDAEVMAKPAI
                     EGIQRILRAAEHAGVKRVVMTANFGAVGFSNKDKNSITNESHWTNEDEPGLSVYEKSK
                     LLAEKAAWDFVENENTTVEFATINPVAIFGPSLDAHVSGSFHLLENLLNGSMKRVPQI
                     PLNVVDVRDVAELHILAMTNEQANGKRFIATADGQINLLEIAKLIKEKRPEIAQKVST
                     KKLPDFILSLGAKFNHQAKEGKLLLDMNRNVSNERAKTLLGWEPIATQEEAILAAVDS
                     MAKYHLI"
     gene            complement(41920..42942)
                     /locus_tag="O7798_000042"
     CDS             complement(41920..42942)
                     /locus_tag="O7798_000042"
                     /EC_number="6.3.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498898.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoate--protein ligase"
                     /protein_id="HDC2862322.1"
                     /translation="MYLIEPIRNGEYITDGAIALAMQVYVNQHIFLDEDILFPYYCDP
                     KVEIGRFQNTAIEVNQDYIDKHSIQVVRRDTGGGAVYVDKGAVNMCCILEQDTSIYGD
                     FQRFYQPAIKALHTLGATDVVQSGRNDLTLNGKKVSGAAMTLMNNRIYGGYSLLLDVN
                     YEAMDKVLKPNRKKIASKGIKSVRARVGHLREALDEKYRDITIEEFKNLMVTQILGID
                     DIKEAKRYELTDADWEAIDELADKKYKNWDWNYGKSPKYEYNRSERLSSGTVDITISV
                     EQNRIADCRIYGDFFGQGDIKDVEEALQGTKMTREDLTHQLKQLDIVYYFGNVTVEAL
                     VDMILS"
     gene            complement(42920..43864)
                     /locus_tag="O7798_000043"
     CDS             complement(42920..43864)
                     /locus_tag="O7798_000043"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498897.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent deacetylase"
                     /protein_id="HDC2862323.1"
                     /translation="MQSSKWNAMSLLMDDKTKQAEVLRTAIDEADAIVIGIGAGMSAS
                     DGFTYVGERFTENFPDFIEKYRFFDMLQASLHPYGSWQEYWAFESRFITLNYLDQPVG
                     QSYLALKSLVEGKQYHIITTNADNAFDVADYDMTHVFHIQGEYILQQCSQHCHAQTYR
                     NDDLIRKMVVAQQDMLIPWEMIPRCPKCDAPMEVNKRKAEVGMVEDAEFHAQLHRYNA
                     FLEQHQDDKVLYLEIGIGYTTPQFVKHPFQRMTRKNENALYMTMNKKAYRIPNSIQER
                     TIHLTEDISTLITAALRNDSTTKNNNIGETEDVLNRTD"
     gene            complement(43854..44654)
                     /locus_tag="O7798_000044"
     CDS             complement(43854..44654)
                     /locus_tag="O7798_000044"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498896.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein-ADP-ribose hydrolase"
                     /protein_id="HDC2862324.1"
                     /translation="METLKSNKARLEYLINDMHRERNDNDVLVMPSSFEDLWELYRGL
                     ANVRPALPVSDEYLAVQDAMLSDLNRQHVTDLKDLKPIKGDNIFVWQGDITTLKIDAI
                     VNAANSRFLGCMQANHDCIDNIIHTKAGVQVRLDCAEIIRQQGRNEGVGKAKITRGYN
                     LPAKYIIHTVGPQIRRLPVSKMNQDLLAKCYLSCLKLADQHSLNHVAFCCISTGVFAF
                     PQDEAAEIAVRTVESYLKETNSTLKVVFNVFTDKDLQLYKEAFNRDAE"
     gene            complement(44655..44987)
                     /locus_tag="O7798_000045"
     CDS             complement(44655..44987)
                     /locus_tag="O7798_000045"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498895.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycine cleavage system protein H"
                     /protein_id="HDC2862325.1"
                     /translation="MKKLANYLWVEKVGDLYVFSMTPELQDDIGTVGYVEFVSPDEVK
                     VDDEIVSIEASKTVIDVQTPLSGTIIERNTKAEEEPTILNSEKPEENWLFKLDDVDKE
                     AFLALPEA"
     gene            complement(45021..46022)
                     /locus_tag="O7798_000046"
     CDS             complement(45021..46022)
                     /locus_tag="O7798_000046"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498894.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LLM class flavin-dependent oxidoreductase"
                     /protein_id="HDC2862326.1"
                     /translation="MVKLSVLDYALIDEGKDAQKALQDSVTLAKLADRLGFKRIWFTE
                     HHNVPAFACSSPELLMMHTLAQTNHIRVGSGGVMLPHYRPYKIAEHFRMMAALYPNRI
                     DLGIGNNPGTTMVKQALDGINPTYDSYDESISLLRDYLTIKDKPSAHTLGVQPHIDHF
                     PEMWLLSSSATSAKIAAELGIGLSVGTFLLPDINAIHAAKDNIDIYKKHFQASTIKMD
                     AKVMASVFVIVADNEAEVAALQHALDVWLLGKLQFAEFEDFPSVDTAQKYKLNDRDKE
                     MIQAHQARIIAGTQEKVKAQLDDFIATFEVDEVLVAPLIPGIEQRCKTLKLLAEIYL"
     gene            complement(46136..46228)
                     /locus_tag="O7798_000047"
     CDS             complement(46136..46228)
                     /locus_tag="O7798_000047"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498893.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDC2862327.1"
                     /translation="MESIFKIKLMNGICRSENMNMKKKNKGEKI"
     gene            46324..47523
                     /locus_tag="O7798_000048"
     CDS             46324..47523
                     /locus_tag="O7798_000048"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498892.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-dependent flavin oxidoreductase"
                     /protein_id="HDC2862328.1"
                     /translation="MYRYKPLLQSIHLPNGIKISNRFVLSPMTVNTSTKEGYITKEDL
                     AYAARRSNSAGMQVTGAAYIEPYGQLFEYGFNIDHDACIPGLTNMASTMKQHGSLAII
                     QLAHAGRFSNQAILNFGKVYGPSPMTLHSPIEHDVIAMSHEKINSIIQQYRDATLRAI
                     KAGFDGVEISIAQRLLIQTFFSTFSNKRTDHYGADSLKNRARLCLEVMRAVQEVIDKE
                     APDNFILGFRATPEETRGSDLGYTIDEFNQLINWVMDVSNIQYLAIASWGRHIYQNTS
                     RTPGDHFGRPVNQIVYEHLAGRIPLIASGGINSPESALDALQHADMVGMSSPFVTEPD
                     FVHKLAEQRPHDINLEFSMADLEDLAIPHAAFKDIVKMMDYGEGLKKHTRDALRQLEQ
                     NYHDSSS"
     gene            47596..48423
                     /locus_tag="O7798_000049"
     CDS             47596..48423
                     /locus_tag="O7798_000049"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498891.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HDC2862329.1"
                     /translation="MTEIKDKVITKDAFALPYTIIKAKNQPTKGAIVYIHGGGLMFGK
                     ANDLSPQYIDILTEHYDLIQLSYRLLPEVSLDCIIEDVYASFDAIQSQYSNCPIFTFG
                     RSSGAYLSLLIARDRDIDGVIDFYGYSRINTEPFKTTNSYYAKIAQSVNETMIAQLTS
                     PTPVVQDQIAQRFLIYVYARGTGKWINMINIADYTNSKYNIAPDELKTLPPVFIAHCN
                     GDYDVPVEESEHIMNHVPHSTFERVNKNEHDFDRRPNDEAITIYRKVVDFLNAITMM"
     gene            complement(48665..50737)
                     /gene="lip2"
                     /locus_tag="O7798_000050"
     CDS             complement(48665..50737)
                     /gene="lip2"
                     /locus_tag="O7798_000050"
                     /EC_number="3.1.1.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498890.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YSIRK domain-containing triacylglycerol lipase
                     Lip2/Geh"
                     /protein_id="HDC2862330.1"
                     /translation="MLRGQEERKYSIRKYSIGVVSVLAATMFVVSSHEAQASEKTSTN
                     AAAQKETLNQPGEQGNAITSHQMQSGKQLDDMHKEDGKSGTVTEGKDTLQSSKHQSTQ
                     NSKTIRTQNDNQVKQDSERQGSKQSHQNNATNNTERQNDQVQNTHHAERNGSQSTTSQ
                     SNDVDKSQPSIPAQKVIPNHDKAAPTSTTPPSNDKTAPKSTKAQDATTDKHPNQQDTH
                     QPAHQIIDAKQDDTVRQSEQKPQVGDLSKHIDGQNSPEKPTDKNTDNKQLIKDALQAP
                     KTRSTTNAAADAKKVRPLKANQVQPLNKYPVVFVHGFLGLVGDNAPALYPNYWGGNKF
                     KVIEELRKQGYNVHQASVSAFGSNYDRAVELYYYIKGGRVDYGAAHAAKYGHERYGKT
                     YKGIMPNWEPGKKVHLVGHSMGGQTIRLMEEFLRNGNKEEIAYHKAHGGEISPLFTGG
                     HNNMVASITTLATPHNGSQAADKFGNTEAVRKIMFALNRFMGNKYSNIDLGLTQWGFK
                     QLPNESYIDYIKRVSKSKIWTSDDNAAYDLTLDGSAKLNNMTSMNPNITYTTYTGVSS
                     HTGPLGYENPDLGTFFLMATTSRIIGHDAREEWRKNDGVVPVISSLHPSNQPFVNVTN
                     DEPATRRGIWQVKPIIQGWDHVDFIGVDFLDFKRKGAELANFYTGIINDLLRVEATES
                     KGTQLKAS"
     gene            51155..52468
                     /locus_tag="O7798_000051"
     CDS             51155..52468
                     /locus_tag="O7798_000051"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498889.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YjiH family protein"
                     /protein_id="HDC2862331.1"
                     /translation="MNQYHSNAQQPSAWRFFVYSLVGILCFFIPFTINGNNTIFVDHV
                     HLAIRSIIGPLMPYVALIMILIGTALPIVRRTFMTSITNLVITLFKVAGAMIGIMYVF
                     KIGPSILFKANYGPFLFEKLMMPLSILIPVGAIALSLLVGYGLLEFVGVYMEPIMRPI
                     FKTPGKSAVDAVASFVGSYSLGLLITNRVYKQGMYNKREATIIATGFSTVSATFMIIV
                     AKTLGLMPHWNLYFWITLVITFVVTAITAWLPPISNESTEYYNGQEGEQEVAIEGSRL
                     KTAYAEAMKQNALTPSLVKNVWDNLKDGLEMTVGILPSILSIGFLGLIVANYTPFIDW
                     LGYIFYPFIYIFPIADQALLAKASAISIVEMFLPSLLVTKAAMSTKFVVGVVSVSAII
                     FFSALVPCILATEIKIPVWKLIIIWFLRVALSLLITIPVALLIFG"
     gene            complement(52595..53263)
                     /locus_tag="O7798_000052"
     CDS             complement(52595..53263)
                     /locus_tag="O7798_000052"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498888.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetylmannosamine-6-phosphate 2-epimerase"
                     /protein_id="HDC2862332.1"
                     /translation="MLPHGLIVSCQALPDEPLHSSFIMSKMALAAYEGGAVGIRANTK
                     EDILAIKETVDLPVIGIVKRDYDHSDVFITATSKEVDELIESQCEVIALDATLQQRPK
                     ETLDELVSYIRTHAPNVEIMADIATVEEAKNAARLGFDYIGTTLHGYTSYTQGQLLYQ
                     NDFQFLKDVLQSVDAKVIAEGNVITPDMYKRVMDLGVHCSVVGGAITRPKEITKRFVQ
                     IMED"
     gene            53403..54203
                     /locus_tag="O7798_000053"
     CDS             53403..54203
                     /locus_tag="O7798_000053"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498887.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MurR/RpiR family transcriptional regulator"
                     /protein_id="HDC2862333.1"
                     /translation="MKFENRVQRYQHLFTKTDKRIVNYIRQNGYSDAFSTINSLAHAI
                     GTSPATMTRFSHKLDYENFQDLKFNIQQEMTETVIENSPIIQRIHKYHQQIIQQTGEF
                     IDNDIIQTFIDKLQSSRHILFAGLGSSGLSATEFYYRMIRMGLKGNVTTDSHLMKISA
                     SLLSHSDMFIAMSNSGNTSELISAAEVAKSHGAYVVAITNFEGSKLTDCADLVLLTTD
                     QSRNTDHQFINTQIATLFLIDIVSYHLLENTNLSQTYQHTKSIILDNK"
     gene            complement(54481..55341)
                     /locus_tag="O7798_000054"
     CDS             complement(54481..55341)
                     /locus_tag="O7798_000054"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498886.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ROK family protein"
                     /protein_id="HDC2862334.1"
                     /translation="MYYIAIDIGGTQIKSAVIDKQLNMFDYQQISTPDNKSELITDKV
                     YEIVTGYMKQYQLIQPVIGISSAGVVDEQKGEIVYAGPTIPNYKGTNFKRLLKSLSPY
                     VKVKNDVNAALLGELKLHQYQAERIFCMTLGTGIGGAYKNNQGHIDNGELHKANEVGY
                     LLYRPTENTTFEQRAATSALKKRMIAGGFTRSTHVPVLFEAAEEGDDIAKQILNEWAE
                     DVAEGIAQIQVMYDPGLILIGGGISEQGDNLIKYIEPKVAHYLPKDYVYAPIQTTKSK
                     NDAALYGCLQ"
     gene            55499..56380
                     /locus_tag="O7798_000055"
     CDS             55499..56380
                     /locus_tag="O7798_000055"
                     /EC_number="4.1.3.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498885.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetylneuraminate lyase"
                     /protein_id="HDC2862335.1"
                     /translation="MNKDLKGLYAALLVPFDENGQVNEQGLKQIAQNAIETEELDGLY
                     VNGSSGENFLLNTEQKKQVFKVAKEAVGDKVKLIAQVGSLDLNEAIELGKYATELGYD
                     ALSAVTPFYYPFTFEEIRDYYFDIIEATQNNMIIYAIPDLTGVNISIEQFSELFNHEK
                     IVGVKYTAPNFFLLERIRKAFPDKLILSGFDEMLVQATISGVDGAIGSTYNVNGRRAR
                     KIFDLARQGQIQEAYQLQHDSNDIIETVLSMGIYPTLKEILRHRGIDAGLPKRPFKPF
                     NEAHRQTLDQLIAKYDL"
     gene            56420..57952
                     /locus_tag="O7798_000056"
     CDS             56420..57952
                     /locus_tag="O7798_000056"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498884.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sodium:solute symporter"
                     /protein_id="HDC2862336.1"
                     /translation="MKEVGFGTLNWVAVIIYLLAMLFIGVYFTKRASQSTNSFFTASG
                     RLPSWVVGFSIYATTLSAITFMSTPEKAFLTDWSYIAGNIAIVAIIPLLIYFYVPFFK
                     KLKVTSAYEYLEARFGPSIRVIGSLLFVVYHLGRVAIVIYLPTLAITSVSDMNPYIVA
                     SLVGLLCILYTFLGGFEGVVWSDFIQGVILLGGALVIIILGVVNIKGGFGTVFADAIE
                     HKKLISADNWKLNTAAAAIPIIFLGNIFNNLYQYTASQDVVQRYQASDSLKETNKSLW
                     TNGILALISAPLFYGMGTMLYSFYTHEAVLPKGFNTSSVVPYFILTEMPPFVAGLLIA
                     AIFAAAQSTISSSLNSISACISIDIKQRFFGKGSERHEVNFARFIIIIAGIFGFGMSL
                     YLIASNSNDLWDLFLFVTGLFGVPLAGVFAVGIFTKRTNTFGVICGLILGIIFAYVYN
                     GVGKGNSPFYVSTISFTVAFVFAYILSFIVPSKHKKDITGLTIFEKDKPSTYISKTAT
                     KK"
     gene            complement(58057..59277)
                     /locus_tag="O7798_000057"
     CDS             complement(58057..59277)
                     /locus_tag="O7798_000057"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498883.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NupC/NupG family nucleoside CNT transporter"
                     /protein_id="HDC2862337.1"
                     /translation="MNILFAITGIAFALFVAFLFSFDRKKIDFKKTLIMIFIQVLIVL
                     FMMNTTIGLTILTALGSFFEGLINISKAGINFVFGDIQNKNGFTFFLNVLLPLVFISV
                     LIGIFNYIKVLPFIIKYVGIAINKITRMGRLESYFAISTAMFGQPEVYLTIKDIIPRL
                     SRAKLYTIATSGMSAVSMAMLGSYMQMIEPKFVVTAVMLNIFSALIIASVINPYKSDD
                     TDVEIDNLTKSTETKTLNGKTGKPKKVAFFQMIGDSAMDGFKIAVVVAVMLLAFISLM
                     EAINIMFGSVGLNFKQLIGYVFAPIAFLMGIPWSEAVPAGSLMATKLITNEFVAMLDF
                     KNVLGDVSARTQGIISVYLVSFANFGTVGIIVGSIKGISDKQGEKVVSFAMRLLLGST
                     LASIISGSIIGLVL"
     gene            complement(59288..60211)
                     /locus_tag="O7798_000058"
     CDS             complement(59288..60211)
                     /locus_tag="O7798_000058"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498882.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pseudouridine-5'-phosphate glycosidase"
                     /protein_id="HDC2862338.1"
                     /translation="MANLQKYIEYSREVQQARENNQPIVALESTIISHGMPYPQNVEM
                     ATTVEQIIRNNGAIPATIAIIDGKIKIGLESEDLEILATSKDVAKVSRRDLAEVIAMK
                     CVGATTVATTMICAAMAGIQFFVTGGIGGVHKGAEHTMDISADLEELSKTNVTVICAG
                     AKSILDLPKTMEYLETKGVPVIGYQTNELPAFFTRESGVKLTSSVETPERLADIHLTK
                     QQLNLEGGIVVANPIPYEHALSKAYIEAIINEAVVEAENQGIKGKDATPFLLGKIVEK
                     TNGKSLAANIKLVENNAALGAKIAVAVNKLL"
     gene            complement(60186..61304)
                     /locus_tag="O7798_000059"
     CDS             complement(60186..61304)
                     /locus_tag="O7798_000059"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498881.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="winged helix-turn-helix transcriptional
                     regulator"
                     /protein_id="HDC2862339.1"
                     /translation="MSDSEKEILKRIKDNPFISQRELAEAIGLSRPSVANIISGLIQK
                     EYVMGKAYVLNEDYPIVCIGAANVDRKFYVHKNLVAETSNPVTSTRSIGGVARNIAEN
                     LGRLGETVAFLSASGQDSEWEMIKRLSTPFMNLDHVQQFENASTGSYTALISKEGDMT
                     YGLADMEVFDYITPEFLIKRSHLLKKAKCIIVDLNLGKEALNFLCAYTTKHQIKLVIT
                     TVSSPKMKNMPDSLHAIDWIITNKDETETYLNLKIESTDDLKIAAKRWNDLGVKNVIV
                     TNGVKELIYRSGEEEIIKSVMPSNSVKDVTGAGDSFCAAVVYSWLNGMSTEDILIAGM
                     VNAKKTIETKYTVRQNLDQQQLYHDMEDYKNGKFTKVY"
     gene            complement(61647..62678)
                     /locus_tag="O7798_000060"
     CDS             complement(61647..62678)
                     /locus_tag="O7798_000060"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000364852.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS sugar transporter subunit IIC"
                     /protein_id="HDC2862340.1"
                     /translation="MDLLIGTLFLFLVLVIFTLFTYKAPNGMRAMGALANAAIATFLV
                     EAFNKYVGGEVFGIKFLEELGDAAGGLGGVAAAGLTALAIGVSPVYALVIAAACGGMD
                     LLPGFFAGYMIGYVMKYTEKYVPDGVDLIGSIVILAPLARLIAVLLTPVVNSTLIRIG
                     DIIQSSTNTNPIIMGIILGGIITVVGTAPLSSMALTALLGLTGVPMAIGAMAAFSSAF
                     MNGTLFHRLKLGDRKSTIAVSIEPLSQADIVSANPIPIYITNFFGGAIAGLIIAMSGL
                     INDATGTATPIAGFLVMFGFNHPTTIVIYGVVMAIVGALAGYLGSIVFKKYPIVTKQD
                     MINRGAVDA"
     gene            complement(62886..63563)
                     /locus_tag="O7798_000061"
     CDS             complement(62886..63563)
                     /locus_tag="O7798_000061"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498878.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HDC2862341.1"
                     /translation="MLKFENVTKSFKDGNRNIEAVKDTNFEINKGDIIALVGPSGSGK
                     STFLTMAGALQTPTSGHILINNQDITTMKQKALAKVRMSEIGFILQATNLVPFLTVKQ
                     QFTLLKKKNKNVMSNEDYQQLMSQLGLTSLLNKLPSEISGGQKQRVAIAKALYTNPSI
                     ILADEPTAALDTENAIEVIKILRDQAKQRKKACIIVTHDERLKAYCDRSYHMKDGVLN
                     LENETVE"
     gene            complement(63576..64625)
                     /locus_tag="O7798_000062"
     CDS             complement(63576..64625)
                     /locus_tag="O7798_000062"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498877.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FtsX-like permease family protein"
                     /protein_id="HDC2862342.1"
                     /translation="MFLAWNEIRRNKLKFGLIIGVLTMISYLLFLLSGLANGLINMNK
                     EGIDKWQADAIVLNKDANQTVQQSVFNKKDIENKYKKQATLKQTGEIVSNGHQKDNVL
                     VFGVEKSSFLVPSLIEGHKATKDNEVLADETLKNKGFKIGDTLSLSQSDEKLHIVGFT
                     ESAKYNASSVIFTNDATIAKINPRLTGDKINAVVVRDTNWKDKKLNQELEAVSINDFI
                     ENLPGYKPQNLTLNFMISFLFVISATVIGIFLYVMTLQKTSLFGILKAQGFTNGYLAN
                     VVISQTVILALFGTAFGLLLTGVTGAFLPDAVPVKFDVLTLLVFAIVLMIVSVLGSLF
                     SILTIRKIDPLKAIG"
     gene            complement(64874..65764)
                     /locus_tag="O7798_000063"
     CDS             complement(64874..65764)
                     /locus_tag="O7798_000063"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498875.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5'-nucleotidase, lipoprotein e(P4) family"
                     /protein_id="HDC2862343.1"
                     /translation="MNKISKYIAIASLSVAVTVSAPQTTNSTAFAKSSAEVQQTQQAS
                     IPASQKANLGNQNIMAVAWYQNSAEAKALYLQGYNSAKTQLDKEIKKNKGKHKLAIAL
                     DLDETVLDNSPYQGYASIHNKPFPEGWHEWVQAAKAKPVYGAKEFLKYADKKGVDIYY
                     ISDRDKEKDLKATQKNLKQQGIPQAKKSHILLKGKDDKSKESRRQMVQKDHKLVMLFG
                     DNLLDFTDPKEATAESREALIEKHKDDFGKKYIIFPNPMYGSWEATIYNNNYKASDKA
                     KDKLRKNAIKQFDPKTGEVK"
     gene            66348..67655
                     /gene="brnQ"
                     /locus_tag="O7798_000064"
     CDS             66348..67655
                     /gene="brnQ"
                     /locus_tag="O7798_000064"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001829028.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid transport system II
                     carrier protein"
                     /protein_id="HDC2862344.1"
                     /translation="MKKQVIISGLMLFSLFFGAGNLIFPPMLGHTAGQNMWIGMLGFA
                     LTGILLPFITVIVVAFYDEGVESVGNRIHPWFGFIFAVVIYMSIGAFYGIPRAANVAY
                     EIGTRHILPVHNQWTLIIFAAIFFAIVYWISLNPSKIVDNLGKLLTPLLLLMVALLSI
                     AVIFNPESALSAPKDKYITHPFISGSLEGYFTMDLVAALAFSVVIVNGYKFKGLTDRM
                     KILKYVCFSGLIAAILLGVIYFALAYVGASTAPGNFKDGTDILTYNSLRLFGSFGNLV
                     FGMTVILACLTTCIGLVNACATFTKKHVPKFSYKIFALIFSIIGFLFTTLGLEMILKI
                     AVPLLTLIYPVSIALVLISFANMFSTFRFSWAYRLATVITLIISILQILNSFNLLHGV
                     ILKSFMMLPLADIDLAWLVPFMLFAIIGFIIDVFIRRPKQATT"
     gene            67892..68716
                     /locus_tag="O7798_000065"
     CDS             67892..68716
                     /locus_tag="O7798_000065"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498873.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="formate/nitrite transporter family protein"
                     /protein_id="HDC2862345.1"
                     /translation="MKEKHIKWDKIFYGDDWVNNVVETIRTKDILQSVYLKRYLLRAM
                     MAGFIIGIITVFVLSVKATHEPDLPPGIVNMASAITFSFALVLILFTNSELLTSNFMY
                     FTVGLYYKVIKPTRVLKIFLLCFAGNILGAAILFSFMRFSNVMTPDMLNQLSAVIEHK
                     TLSTGFVSILMKAIFANFFINISLVIAMQIDDVLAKMFVMMFGVTIFAFMGYEHVVYN
                     SCLFMGGLIYQVDTLHFIPAISNIAAAFIGNYIGGGLIIGLFYAYLNDHHQFYKNN"
     gene            complement(68932..69330)
                     /locus_tag="O7798_000066"
     CDS             complement(68932..69330)
                     /locus_tag="O7798_000066"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498872.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4064 domain-containing protein"
                     /protein_id="HDC2862346.1"
                     /translation="MEKSIKIMTIIGIVVQGLATVFSLLLMVLAASGVMTTDVSTTVN
                     GEVDPVDAETAAAIFTVLFLSLFIFGIISIILGAIGMFKASKNKKMSGILLIIGAVIS
                     GNIITFALWLISGIKLLTNNKPKDEISDLS"
     gene            complement(69483..69857)
                     /locus_tag="O7798_000067"
     CDS             complement(69483..69857)
                     /locus_tag="O7798_000067"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498871.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4467 domain-containing protein"
                     /protein_id="HDC2862347.1"
                     /translation="MKRILVVFLMLAIILAGCSNKGEKYQKDIDKVYKEQNQMNKIAS
                     KVQNTIKTDIKQEDSNTHVYKDGKVIVIGIQLYKDREKMYYFAYEIKDGKAEINREID
                     PIKYMKDHKADYEDENVEVEKD"
BASE COUNT        22221 a        13315 c        10629 g        23953 t
ORIGIN      
        1 cgtcaattat ctgtttttaa atctggcaat tcataatcag gagcacttat ataagtattt
       61 atccttttat ttatttgtat ttttggtttg tttaattctg cttgctatca cattatcctt
      121 ttcaacctat caacttgcca aaatatcaaa taacctaact caaaagttta aatatgatta
      181 taaattgaat aaaaaaatag ccattaagga aaacgcacta attaataaac tttctattga
      241 ttttaacgat tctgtacatc taaatagacc aactatatac actgattcga aggcaaagga
      301 aaaatcagta taaaagttat taaaaaacga aaaaaaagaa attttaaact tatgccttta
      361 actagatttt atctgactat attttactca ctatttttct tatctatact ttttaattca
      421 tttttaatat gcgtcatcat tagtacaaaa ttcgaatatt tactttttac tatatatgcg
      481 ttagttataa ctatttttat cactcaatgc atatcaatgt ttaaactgat tgataacatg
      541 tataactatg atcatttaaa gcactataaa gaaaaaaatg atgaagatga caaggaggga
      601 tgacaaatgt gggttcgcga aatcactaaa aacaaaagta cggcctatcg ctatttagag
      661 cgctatacag accctttaac tggcaagtat aaaacagtat cagttacacg taacaagaat
      721 aatgtacgta gccaaaagga cgctcaatta gaattaaata aaataattga gcaacgtttg
      781 aaacataata gcacgaaaca acttgaaaaa ttaacgtttc acgatgtgtg cgatgaatgg
      841 ttagaacatt acaagacaca ttcaggctca aaaccaacca ctattaaaga aaagaaaagt
      901 aatgctaata cagtcaaaaa tgctattgat agcaaagtac tcatcagcaa gattacgcac
      961 acctacttac aaaacatcat taatgaatgg gctaaatcac atagtattgg ccatgttcaa
     1021 tctcttgtta ttgttattcg ttccgttttc aaatatgcgt ttaaatatta tgatctgcac
     1081 gatattagtg tgttagataa aatagatata cccaagaaag cccaaaccag aaacgaactt
     1141 caagctaaac gtaataacta tttagaagat agcgaagtaa aggagttact tcaatgcttc
     1201 gactatctaa ttaaacataa gcgtcatgct acacgtaaac gtaactatga aatggtaaaa
     1261 gcattagtag aatttcaaat taacaatgga atgcgcattg gcgaactcct agcaatcaag
     1321 aaagacaata taaactatga agataaaact ctagatatcg acggtacaat taattgggta
     1381 accgataaag aaacgggagc atttggagta aaagaaacta ctaaaacaag taaaagttat
     1441 agaacaatag gactaactac ccaaagtatc aacttactta aaacacttat tttggataat
     1501 aagaaagaaa accagtggaa tgaagatttt attgatagag gatatgtatt cactaataca
     1561 gctggtagtc ctatagactt aaacaaagtg aatagcatta ttaaagaggc tactgagatt
     1621 agttcaatta acaaacgtgt gacaacgcac acattacgtc atacacatat atctacactt
     1681 gcgcaattag gaataaacct aaaagcgata caagatagag ttggccacag tgattataaa
     1741 acaactttag agatatacac gcatgttact gatcagatgg ctaaagatat gatgaacaaa
     1801 cttgaggagg cgaataaaat atgaacgaaa agttacactc agttattgtt ttcattgaaa
     1861 attttttaat agattttcta aatatattcg gaattaacca agaagactat tatctatgca
     1921 agtcgcaatt aattttatat atccaaaagt tatatcattt attattagac atatgcataa
     1981 cttttatttg tatttctctt attgtgtcga tagttggtta cataatagat aaaaacaaaa
     2041 actatgacgc taaaaaaatc cacaacaaga ttagactcgt ctatcctagc aatagcaaaa
     2101 gtggtgggga aatagtttgt aaatattggg tctggcaacg caagaaaaag aaacttatag
     2161 aatcactcat tacccatcta acaatacacg ggaacaaaaa ttcgagacat gcacgaatta
     2221 ataccagttc aaagccgata ccgttcccat ttttaagaga agtatacggc ttatcaaaat
     2281 catcataaaa ggagagtgta tatataatgg ataaaattaa tgcaatcgga caacagatca
     2341 ctttatttaa aaatgaaaac gatgattata taagtttgac agatatagca aaatataaaa
     2401 gtgaagaccc aaacgatgtt ataaaaaatt ggttgagatc taaagacact atagaatttt
     2461 taggagtttg ggaaaatata aataacccta attttaaacc cgtcgaattc gacgggttta
     2521 gaaatcaagc tggtagaaat gcttttacaa tgtcgccaac taaatggata aacacaacca
     2581 atgcaattgg cttagtaacc aaatctggtc gatacggagg cacatttgct caaaaagata
     2641 tagctttcga atttgctagc tggatttcag cagaattcaa attatatatt attcaagact
     2701 atcaacgctt aaaagaaaga gaagaagatc ctgaaaaatt aaactgggat ttaaaacgtt
     2761 tacttagcaa aacaaactat tcaattcata cagatgctat aaaagacaat ttaatcaatt
     2821 ctaaattatc acaacaacag attggatata cttatgctaa tgaagccgat gttctaaatg
     2881 tcgcgatatt tggtttaacc gccaaacaat ggagagaaaa taaccctgac aaaaaaggaa
     2941 accaaagaga ttatgccact atcgaagaac tgatagttat cagcaattta gaaagcagaa
     3001 atgctgaact aattgataaa ggtattgatc aaaaataaag actaaaactt ttaaacgagt
     3061 tagccagaaa acaaatgaaa tcattattaa attctagaac cctcaattat tccaaaaatc
     3121 aaatattttt agaataataa tatacaattt aatattttgg atattacaga ggttaactgt
     3181 tgcgatggtt acctcttttt ttacaccaaa atttcataag cgctcacact ttgcgaattt
     3241 tttgcgaact tcccaaatga aagtaaacaa aaataccccg taagcctata cctacggggt
     3301 ttgacaataa attatatatt attgttcttc tttaacatat ggtaataatg ccatatgacg
     3361 agaacgtttg atagctgtag tcaacatacg ttgatattta gctgaagtac cagttacacg
     3421 acgtggtaaa attttaccgc gttctgagat aaaacgtttt aataattcag tgtctttgta
     3481 gtcgatatgt gtaataccat ttgctgtgaa atagcatact tttttacgac gacgtccgcc
     3541 tcttcttggt ccacctgcca tgattgtgtg cctcctttga taattttttc gctttaattt
     3601 cgttaatttt tattagaatg gtaagtcatc atcacttata tcaatcggtc cgtttgcatt
     3661 tgcaaatgga ttatcagatt gtttcgtgtt tgatgaatta ttgtacgaat tgttttgtcc
     3721 tgattgttga ccaccgaatc cttgaccgta atcttggaat tcattttgtt gacgttggcc
     3781 accattttgt tgcgcatttt taggttcaag gaattgaacg ctatcacaca caacttcagt
     3841 aacaaacaca cgacgacctt cttgattttc ataattacgg gattgtaagc gaccatctac
     3901 accagctaaa ctacctttag ataaatagtt atttacatta tctgcttgtc ttctaaaaac
     3961 aacacagtta ataaaatctg cttcgcgctc cccttgagca ttcgtgaacg tacgatttac
     4021 tgcaagagtg aatgtcgcta cactcacacc tgagggagtg gttctgtatt ccggatcttt
     4081 cgttaaacga cctactaata caactctatt tagcatttaa acgccccctc taattattac
     4141 ttgtcttcgt cttcacgaat aaccatgtaa cgaatgatat cgtcactgat tttagctaga
     4201 cgttggaatt cgtcagtagc tttgttgtta tcagatttaa cacgtacgat gttgtagaag
     4261 ccatctttga aatcattgat ttcataagct aggcgacgtt taccccagtc ttttgcttct
     4321 aaaacttctg caccttcagt agctaagata ccgttgaaac gttcaactaa cgctttttta
     4381 gcatcttcct caatgtttgg gcgtacgatg tacataactt catatgttct cattttatat
     4441 ttgcacctcc ttgtggtcta tacggcttat caatcttaaa acagataagc aaggaataat
     4501 tttcattact cacaataaag aattatatca tgcgccatta ctttttacaa taataattca
     4561 aactactctt catatcattt ttgatattaa ttcatttgaa actttctatg atatttttaa
     4621 aaatacactt cacaaaagcg aacatatgtt ctataatagt tgtgaggtgg taaggaatga
     4681 atttaaatat tgattggtct aaagattttc aagaattcca agagatactt aatagtggta
     4741 ttcatcctga atggctttat tgtgcaaagg ctaatcttgt tttagagcct gcttatactg
     4801 gcgaaggcaa acaatttttc agcactcaag atattattaa cgcgagtaaa attattccat
     4861 tcttttaata aattatacgc ataattaaaa gaggcgaaca attgattccg cctcttctac
     4921 atatatacta tttaattaac ttcactctat cgtttataca ttaaatctga aatgaacgat
     4981 atcgccatct tgcataatat attctttacc ttctaatcgt tgtctgcccg cttctttagc
     5041 gccactttcg ccaccatatt gtacatagtc gtcataactt gttacttcgg cacggataaa
     5101 tccacgttca aaatcagtat gaatgatacc agcacattga ggtgcagtca taccttgttt
     5161 aaatgtccaa gcacgtactt cttgcacacc agcagtaaaa tatgttgata atcctaataa
     5221 ttcataagtt gttctaatta atcgatctaa tcctggttct tcgataccta aatcttctaa
     5281 gaacatttct ttatcttcat catctaatgt agcaatttct tcttcaattt ttgcactaat
     5341 aacaatcact tcagagtctt cttgcgctgc atattcacga atcgctttta ctttatcatt
     5401 atcatcatca ccaatttcat cttcaccaac attagcgata taaagcattt ttttagaagt
     5461 cagtaattgc gcttgattca cccatttttg atcttcttca ttaaagtcaa tactacgagc
     5521 gggtttacca ttttctaaag cttctttaat agttgttaaa atacgtactt ccatttcagc
     5581 agtcttatct ttttgacgtg ctaatttttc aattctaggc aaacgtttct caacagattc
     5641 taagtccgct agtactaatt ccatattaat aacttcaata tcatcaatag ggtctactcg
     5701 accagcaaca tgagttacgt tatcatcatc aaatgcacga acgacctgac aaatcgcatc
     5761 tacttctcta atatgtgata agaatttatt acctaaccct tctccctttg aagcaccttt
     5821 cacaatacca gcgatatctg taaattcaaa tgtagtcggc aatgtctttt taggttgaac
     5881 catttcttct aatttaagta atctagcatc tggcacttct actatcccta cattaggatc
     5941 aatcgtagcg aatggatagt tcgctgctaa agcacctgct tttgttattg cattaaataa
     6001 tgttgattta ccaacgtttg gcaatccaac gatacctgct gttaaagcca ttaatcattc
     6061 tcctatcttt gtgtatcatc atgagattcg atgatttttt taagtttttt atcaaacgtt
     6121 tgacgtggaa tcataatact tctttgacaa ttttcacatt taattcttat gtctgcaccc
     6181 attctaataa tcttaaaacg gtttgttcca cacgcatgtt gttttttcat ttctactata
     6241 tcatttattc catattttga cgccattaaa tatgacctcc atgtattata aactactaaa
     6301 caccgttttc actatgatta taagcagtca taattggttg aggtgtttta ataccttctt
     6361 gtaaaaacat tttttgtact tctttgcgaa taattcgagc tccagcaaat ccttcacctg
     6421 gaattgtttc tgcagatatt ctcaatatta ctcttgtatc ttcaatagca tcaataccaa
     6481 taacaaccgg atcactaaca aataagtaat atttactacg taaagaagta aatagtttgt
     6541 ttagtttttt atcaacatta tcaatgtttt cttcgacaga cactggaatt ttaacgatag
     6601 ctgtaccatt tgtaattgag tagttcgtta tttcacccat actactattt ggtaaaattg
     6661 ttaattctcc tgaaattgta ttgattcgtg ttgaacgaag tccaattgat ttaactgttc
     6721 cctctgctac agttgtacca ccgttattta tcttaacata atcacctaca tcaaattggc
     6781 tttcaaatat aataaagaat cctgtaatta cgtctttaac tatagtttga gcaccaaaac
     6841 ctactgctaa gcctacgaca ccagcactgg caattacccc ttcaacacta atgccaaatt
     6901 tacttaaaat cgtcgtaata actataaacc aaacgatata cttcactaca ttttgaacaa
     6961 gagatattaa agttttagag cgctttttgt tactcttttt acttttattt tgaatcttaa
     7021 atccctgttc aatcatttta ttcagtattt taataactat gagggctacg ataatataaa
     7081 taacaatcat agcgatttta gttgcaatgt tttcatatgt ttctattttt gttaatggct
     7141 caaatagaga tgaaataata ttcatgactt gattcatgat aagcgttact cccttctata
     7201 tgatatatca atattgtatt catattttta tatacttcca acctacgaaa gtctcaatat
     7261 atctagaatc aaatgttcac tgattacaat ttatttacac ttgcacaaag agttattata
     7321 taaaattgtg taactattta ccatacctac gatttaattg ttcaattatt ctcacaaaat
     7381 cttcttgtga atcaaactca aatgagattt taccaaccga tttttttatt gatatatcta
     7441 ctttggtacc atactgttct cgcaactgtc gttcttgctg ctttataaat ttaggcttag
     7501 ttatatctac tttgtctgtt tccgactttg acgaaacatt ttttaattca ttaacatggt
     7561 tttctaaata tctgacactc cacttttctt taacaacccg tttcgctaac ctaagcattt
     7621 gttgttcatc tttaattgcc aataacgttc gtccatgtgc acttgtcagt cgcccatctt
     7681 ttaccatgtc agcaatcttt ttcggcaaat gtaataacct caacatattc gctatatacg
     7741 ggcgcgactt actcaatcgt ttcgctactt cttgttgtgt aattttcaaa tctgtcatca
     7801 aacgttgata actttcagct tcttcaatcg catttaagtc ttctcgttgt aaattttcga
     7861 tgaccgccag ttccatcata tcttcatctg ttaaatcttt gataatcgct gatacgtatt
     7921 ttagaccagc aattttcgaa gctctaaacc ttctttcacc aactacaatg taataacctt
     7981 gaactgtttt tctaagcaca attggttgca aaattccata ttgcttaatt gaatctgcca
     8041 aatcatttaa atgattttca tcgaaagttt ttcggggctg atacggattc ggtttgatat
     8101 ccgatatatc tatttgctta atttgttcat cttttgtttt agtaatacgt tgatcttcac
     8161 tttttgacaa ttcactcaca tcacttttta tttgataaca acagttaaat atattttatg
     8221 tattctaaat gagtcagaca accattaacc acactttatt taaaaaataa ttcatttttc
     8281 aacttcaaga taccaattac aatttcacaa acaaattaac ttttaaatca aaattttctg
     8341 aataattgtt gacaaatctt tttttactct gtaagctaat taatatctta taacagttta
     8401 atgaaacgta aacacaataa agaggaaagt aaaacacacc ctgcttatac agagagtctt
     8461 tagtagctga gagaagattt tgaaagcgtg tttgaaaatg gccttggagt gttgatgcca
     8521 atatgaggtg tctacgggtt cgcccgttat agcgatacag tattaacatt gatgttaaat
     8581 ggcgtactgg attctttacg cacgattttt tgttaataag tatgggatag cacattacta
     8641 tatccttact tactgacttt aattgtgata attgttcagt aagcatattt acttttaatg
     8701 cgtactgaat aaggttattt cagcgatgga ataacaaata aaggtggtac cgcgaaacat
     8761 aagctttcgt cctttttatc cgattcattc gggtacgaag gacggaagct ttttttattt
     8821 tttcttatag gagggtctta atatgaagga tacacagtta gcccaaatca cattaaccga
     8881 tgattcaacc ggtgctatag cgaatccaat ccatttatct actgcctaca agcatccaaa
     8941 actaggacaa tcgacaggtt ttgattatac acgtactaaa aatcctacac gctcaacatt
     9001 tgaaacctgt tttgccaaac ttgagcatgg tattgcatca ttcgctacat caagtggaat
     9061 gtcagccatt caattaatat gtaatctatt taaacctcat gatgaaattt tagtttcatt
     9121 cgatttatat ggtggcacat ttagattatt tgaattttac gagcaacaat acgatatcaa
     9181 atttaagtac gttgatttta cagattatga acaagttgaa aaagaaatca ctgataaaac
     9241 agttgcatta ttcattgaac caatatctaa cccacaaatg attgctattg atgtaaagcc
     9301 atactatcaa ctttgtaaag ctaaaggctt attgtcaatt atcgacaata cttttttaac
     9361 accttatctt tcaacaccac tagcagaagg tgctgatata gtcttacatt cagccacgaa
     9421 atatattggc ggacataacg atgtactagc aggtgtcgta accgtcaaag atgaatcact
     9481 cgcgcaacag ttgtttgatt ttcacaacat gactggcgca acactttcac caatagatag
     9541 ttatttgttg ttacgtggac ttaaaacttt gcatttacgc attgagcgtg cgcaatcaaa
     9601 cgctagaaaa cttgctaaaa aatgtcagtc acttcaagca attgacgaag tactatatag
     9661 cgggcaaact ggcatgctta gtttaagact taacaaggcc tatagcgtcg ctaaattatt
     9721 agaaaattta gacatttgca tttttgcaga aagtttagga ggtactgaaa cattagtgac
     9781 cttcccttac acccaaacac atgttgatat gccagatgct gaaaaagata aacgtggcat
     9841 tgatgagtat ttaatccgct tatcactagg tgttgaaaat tatgaagaca tcgaacgcga
     9901 tatcatccaa gcattagata aagctcagat tggagagatt gtatgacact ttcaaaagag
     9961 acagaagtga tattcgattg gcgtagaggt gtggaatatc attcagctaa cccaccactc
    10021 tatgattctt caacattcca tcaaacaagt cttggtggcg atgttaaata tgattatgca
    10081 cgaagtggca accctaaccg tgaactttta gaagagaagt tagcacgatt agaacaggga
    10141 aaattcgctt ttgcttttgc atcaggtatt gctgctattt cagcagtact tttgactttc
    10201 aaatctggtg atcatgtcat cttacccgat gatgtatatg gcggtacttt tcgcctcact
    10261 gagcaaattt tgaatcgatt taatattgaa tttacaaccg tagatactac aaagctcgaa
    10321 caaatcgagg gtgccattca atcaaacaca aaattaattt atatcgaaac accatcgaat
    10381 ccctgtttta aaattactga tatcaaagct gtttctaaaa tagccgaaaa gcatgaacta
    10441 ctggtagctg tggacaatac atttatgaca ccgttaggtc aatcaccttt attacttggc
    10501 gctgatattg tcattcatag tgctacaaaa tttttaagtg gacatagcga tttaattgct
    10561 ggtgctgtca taactaataa tgaggcaatt agtgacgctc tttatttaat acaaaatggt
    10621 acaggcaata tgttatctgc tcaggatagc tggacacttg ctaaacattt aaaaactttt
    10681 ccaatcagat ttaaacaatc tgtcgaaaac gctcaaaaaa tcgtgtcatt tttaataaag
    10741 caagatgaaa tttcagaagt ttattatccg ggactcacta ctgctcattt agaacaagct
    10801 aaaaatggcg gtgccgttat tggctttcgt ttagctgatg agtctaaagc acaacaattt
    10861 gtcgatgcac tgacattacc actcgtttca gtgagtctgg gcggtgttga aacgatcctt
    10921 tcacatccag caacaatgtc tcacgctgca ctacctgaag aagtgagaca agaacgtggt
    10981 atcactttcg gtctattccg attaagtgtt ggtctcgaag atcctgatga actcattgca
    11041 gacatcaaat acgcattaaa ggaggcattc aatgagtcaa ttcctcacac aattgaaaga
    11101 taatgtttta gtagctgatg gcgctatagg aaccatttta tactctgaag gattagacac
    11161 ctgtccagaa gcatataatc ttagccatcc agataaagtt gaacgcatcc atcgttcata
    11221 tattgaagcc ggtgctgatg tcattcaaac caatacttat ggtgcaaatt ttgaaaagtt
    11281 aaaacgattc ggtcttgaag ataaagttaa agcaatacat caagccgccg ttcgcatcgc
    11341 aaaaaaagca gcaaataaag atacgtatat attaggcaca gttggtgggt ttagaggtat
    11401 caaacaagag gatatcagct tacaaactat tctttatcat actgaaattc aaatagacac
    11461 cttaattgaa gaaggcgttg acgcgctact tttcgaaacg tattacgacc tagaagagtt
    11521 aacaaatgtc atttcacgaa cgagaaagaa atacgacatt ccaatcattg ctcaattaac
    11581 cgcttcaaac acaaattact tagttaatgg tcaggcaatc aatgaaggat taaaacaact
    11641 cgttcaatgt ggtgcaaaca tcgtgggact caattgtcat catggcccgc accatatgca
    11701 agagtctttc acacatattg aattaccaga gcacgcattc ttatcttgtt atccaaatgc
    11761 cagcttatta gatattgaaa atagtgaatt taagtatagt gacaatgcac aatatttcgg
    11821 tcaagttgct caaaatctaa ttcgcgaagg tgttcgttta attggtggtt gctgtggtac
    11881 aacgccagag cacatcaaat ttattaaaga atctattcag acacttaaac ctgttaatga
    11941 caaaaaagtg attccgatac caacgaaagc acttttcaat ccatctcaaa ataaagttag
    12001 acaatcatta acatctaagg ttcaagaacg tccaaccgtt attatcgaat tggatacacc
    12061 gaaacattta gacacggata gattttttga aaatatcgct aaacttgata aagctaatgt
    12121 agatgcggta acactcgcag ataattcatt ggcaactgtc agaattagca atattgctgc
    12181 tgctagctta attaagcaat attacaatat tgaaccactc gtacatatta catgtcgaga
    12241 ccgaaactta atcggcttgc agtcccattt acttggatta tcgctcattg gcgttaacga
    12301 aatattagcc ataactggtg atccttcaaa agttggtcac ttaccaggtg caaccaatgt
    12361 ctatgatgtt aattctaaag gattaactga actcgctcta agatttaatc aaggtattaa
    12421 cactgacggt gatgcgctga agaaacgtac acacttcaac atcgctggcg cctttaaccc
    12481 taatgttcgt aaattatatg gtgccgtcaa aagattagag aaaaagatag aaagcggaat
    12541 gtcttatttt ataacacaac ccgtgtacag caaagagaaa atcattgaaa tttaccatgc
    12601 cactaagcac ttgaacaaac catttttcat aggcattatg cctatcgcaa gttacaaaaa
    12661 cgcactcttt ttgcataatg aagtgccagg aatcaagatg tcagatgaaa ttttacaaca
    12721 atttgaagca gttaaagatg ataaagccaa aacacgagaa ctaagtctta agctttcaaa
    12781 ggatttaatc gatactgttc atgaatattt taatggttta tacattatca caccgtttca
    12841 aaatgtcgaa gattcattag aacttgcagc atactcaaaa tctattactg ctcacaagga
    12901 ggcaatatta tgacaacaat taaaacatca aacttaggat tcccaagatt aggtagaaaa
    12961 agagaatgga aaaaagccat cgaaagttat tgggcaaaga agatttctaa agaagaatta
    13021 gatcaaacat taactgatct acataaagaa aatttattat tacaaaagta ctatcactta
    13081 gatagcatcc cagttggtga tttctcttta tatgaccata tattagatac gtcattatta
    13141 ttcaacatca tccctgaacg tttccaagga agaactattg atgatgattt attatttgat
    13201 attgctcgcg gtaataaaga ccatgttgca agtgcactta taaaatggtt taacactaac
    13261 tatcattaca tcgtacctga atgggacaat gttgagccta aagtgagtcg caatgtatta
    13321 ttagatcgct ttaaatatgc ccaatcttta aacgttaacg ctcaccctgt cattgttggt
    13381 ccgattactt ttgttaaatt atcaaaaggc ggtcaccaaa cttttgaaga aaaagttaaa
    13441 acgttattac cactttataa agaagtgttt gaatcattaa ttgatgcagg tgctgagtac
    13501 attcaagttg atgagccaat cttagttaca gacgacagcg aaagctatga aaatattaca
    13561 cgtgaagctt atgactattt cgaaaaagct ggtgttgcta aaaaattagt cattcaaaca
    13621 tactttgaac gtgcacatct taaattctta agttctttac ctgttggtgg tataggttta
    13681 gactttgtcc atgataatgg ctataacctt aaacaaattg aagctggaga ttttgataaa
    13741 tcaaaaacat tatacgctgg aattattgat ggtcgtaatg tatgggcaag tgacattgaa
    13801 gctaaaaaag tcttaatcga taaattgtta gcacacacta atgaacttgt cattcaacca
    13861 tcatcttcat tattacatgt tccagtatct ttagatgatg aaacattaga tacaagtgtt
    13921 ggcgaaggct taagctttgc aactgaaaaa ttagacgaat tagatgcatt gcgtcgccta
    13981 tttaatcaaa acgatagtgt taaatatgat aaattaaaag cacgttatga gcgtttccaa
    14041 aatcaatcat tcaaaaactt agattatgat ttcgaaagcg tgcgtacttc aagacaatca
    14101 ccattcgcgc aacgtattga acaacaacaa aaacgtttga acttaccgga tttaccaaca
    14161 acaactattg gatcattccc acaaagccga gaagttcgaa aataccgtgc agattggaag
    14221 aacaaacgca ttacagacga agcatatgaa acattcttaa aaaatgaaat tgctcgatgg
    14281 attaaaattc aagaagacat tggcttagat gtattagttc acggtgaatt tgaacgtaat
    14341 gacatggttg aattcttcgg agaaaaatta caaggtttct tagtaactaa attcggttgg
    14401 gtgcaatcat atggttcacg tgccgtaaaa ccaccaatca tttatggtga tgtaaaatgg
    14461 acagcgcctt taactgttga tgaaacagtt tatgcacaaa gcttaacaga taaaccagtt
    14521 aaaggtatgt taactggacc tgtaacaatt ctaaactggt catttgaacg tgttgattta
    14581 ccacgtaaag tcgttcaaga tcaaattgct ttagcaatca acgaagaagt attagcactt
    14641 gaagctgcag gaatcaaagt tatccaagtt gacgaacctg cattacgtga aggcttacca
    14701 ttacgctctg aatatcacga acaatatctt aaagatgctg ttttatcatt taaacttgca
    14761 acgtcttcag ttcgtgatga aactcaaatc catacacata tgtgttattc tcaattcggt
    14821 caaatcattc atgctattca tgacttagat gctgatgtta tttcaattga aacatctcgt
    14881 agccatggtg atttaattaa agactttgaa gatattaatt atgatttagg tattggtcta
    14941 ggtgtatatg atattcatag tccacgtatt ccaacaaaag aagaaattac tacagcaatc
    15001 aatcgttcac tacaacaaat cgaccgctca ttattctggg taaaccctga ctgtggttta
    15061 aaaacgcgaa aagaagaaga agttaaagat gcattgactg tgcttgtgaa tgctgttaaa
    15121 gctaaacgcc aagaataatc gcagcattta tcatataata aactaaaaac gggtgatttt
    15181 atgacacaat atcctttatg gcaacaatta aatactttaa aacaagcaac ttgggttgat
    15241 ttaacgcata catttgatcc ggaaatacca cgttttagtg agtttgaaaa aggcgaagtt
    15301 tcaactttat tcacggttaa agatcatggt ttctatgtgc aacgttggaa tattgtaacg
    15361 caatatggta ctcacattga tgcaccaatt cactttgtcg agaataaacg ttatttagaa
    15421 gacattgatt taaaagaatt ggtattgccg ttaattgtat tagacttttc aacagaagta
    15481 gcgaacaaca atgatttcat cgtaacacgt gcgcatatag aagcatggga aaaagagcat
    15541 ggtactattg aacctggcac ttttgttgca cttcgtaccg attggtcaaa acgttggcct
    15601 aatattgaaa agtttgaaaa caaagatgcg aacggacaac aacatgcacc gggttgggga
    15661 ttagatgctt tgaagtactt aattgaagaa cgtcgtgttg aagctgttgg tcatgaaaca
    15721 ttcgataccg atgcatctgt ggacgttgta aaaaatggtg atttagttgg cgaacgttat
    15781 attcttggtc aggataaata ccaagtcgag ttattaacta atttagatca attaccaact
    15841 cgtggcgcca tcatttacgc tatcagccct aaaccaaaag atgcacctgg gttccctgtt
    15901 agagcatttg caattaaacc atcaaatgac taatattacc caataaatcc ataaacaaat
    15961 aaaaacaggt tatgccaaca tgtaattaat actgttgtga taacctgttt tcttattatt
    16021 tatactttga tacaactgca gcgatagctt gaccgccacc aatacacaat gatgttaaac
    16081 cagtttcaac ttcatcattc agttgatgca ataatgtcac taatactcta gcaccagatg
    16141 caccaatagg atgtcctaat gcaatagcgc cacctttaac attcaccttt tcaggaggta
    16201 attttaattc acgatcaaca gctaatgatt gtgctgcaaa tgcttcattt aattcaaata
    16261 catcaatatc gcttaattct tttttactac gtttcaaagc cttttctaca gcgccaactg
    16321 gtgcaatacc cataatagaa ggatctacac catgacttcc aaagccatca agcactgcca
    16381 atggttcgat atttaattct ttagctttgt cttctgacat gactaacatc atcgcagcac
    16441 catcattgat tcctgatgca ttacctgctg taactgtacc gtcttttttg aaagctggtc
    16501 ttaatcgact taatttttcg actgatacat tttcacgtac accttcatcc ttagtgacta
    16561 cgattggttc acctttacgt tgaggaatcg atactggaac tatttcacta tcaaattcac
    16621 cattttgctg tgcacgtact gctttttgtt gtgagtttac agcaaatgta tcttgttctt
    16681 ctcttgaaat accatattgc tctactaaat tttcagcagt aatacccata tgatattgat
    16741 taaatacatc tgttaaacca tcatatacca tgctatcaac cattgattga tgtcccattt
    16801 taaaaccaaa gcgactgttg ttgacaagca ttggtgattg agacatattc tccataccgc
    16861 cagctagcac gatgtcattt tcaccagtca caatagattg atatgctaat tgaatcgact
    16921 ttaacccaga accacatact ttattcaccg taaatgcagg tactgtttct ggcaagccac
    16981 ctttcatagc agcaattcgt gctggatttt gtccttgtcc tgcttgtagt acgttaccga
    17041 tgataacttc atcaatctca cttggattca aacccgtctc tttaataata tgttctatta
    17101 aagtcgcacc taaatcatag gctggcacgt ctttaaacgc acctccaaaa acgccaatag
    17161 gtgtcctgta tgctgctgct aatacgactc tcgtcatgtc atattcatct ccttatgata
    17221 tatacaattt tattactaat acgtctaatg aaccaatacg ccactaacat ccaatttatg
    17281 aaaccaattg ctacgtatgt tacattttca ttcttgttat gcatttaaca aatcatatta
    17341 tacaatgatg taatttgttt gggcaatcgg aaacgtaaac ggtttcactt taacatttca
    17401 ccctcttaaa tatgctctat catcctcatc tatagtacaa aattatgctt tgatttacca
    17461 caaattatca ttaatcattt cgcgtaatga ctctaattaa attctatcta tcattgcatc
    17521 gctattcaca gctggtttca ccatcaattt ctcatcaatt ttttattacc atgacgtctc
    17581 cagtcaaata ttaaatcgct gatgattgtt aattccgcaa ttaccttgca gtcacctctc
    17641 cttccacttc atcgccaaat ctgcccctat tcactagaaa aaataaatag tatacttagt
    17701 aaattaatta cacatcttaa aggagttaaa attttatggt taatgcatta acaccaaaac
    17761 atttagctga aaagcgtgca ggattccatg agttgttctt tgatttaatt ttcgtctatg
    17821 ccattcaaaa aattgcacat gtgattttaa caacacaaaa cggttccatt tcagctgatt
    17881 tatttttcaa atacatcgtc atgagtttgt tcttatggtt aatgtggtct catcaaacat
    17941 tttttacaaa tcgatttggt caagttacat tcaaagacgt ctcgtttatg atgtttaata
    18001 tgttcatcat ggtcttccta tctaacagcc tatatccgga ctttgaaaag acattcttcc
    18061 cattcttctt atgcgtggca attatgtatt taagtatcgg attacagtat ttattacata
    18121 tacgtacagg gttagattat ggcgataagc gtacatgtca agcttttgcg agcgtagcct
    18181 ttgtgatttc atttttatca tttctatcat tagtactacc acaaagtatc cattacatcc
    18241 ctggattttt aggcgtattc attgcagcga caggacttat tccatttcag aaatatcttg
    18301 tattatcacc tgttaatatg atgcatttag tagaacgttt ttcgttacta acaattatta
    18361 tctttggcga ggtactggtt ggtttagctt cgtcatcatt tagcattgat cattttagtt
    18421 acatttatat attccaattt atgattttaa ttagtctttt cggtgtatat tggatcatta
    18481 ctgaaaatta tattaatcat aaattaacat ctatcggttt ccgtttatcg tatacgcatc
    18541 tattaatcaa tatcgcttta ggtgtgatta atgctgcaat tgtttttagt aataacaata
    18601 aactaaatga cttgtttgaa attaatatga tgtatatcag tgttttaata ttctatattg
    18661 gattatggtt aatcacgcct tatttccata atgaactgac aaacgcgaag tatatttcat
    18721 attcactagg tatactcgtt atgtcttata ttgtcagcct tttatttaaa ggtcacgacc
    18781 atgtaatgat tatctcagta tcagttgcaa ccttctgcat catgctgatt tattttaaaa
    18841 atcaacgtct acgtaataaa catgaataaa tagtatttac ctcggtcaaa gtatttgaac
    18901 tgaatccaaa agtgtcgaac ttcacattat acttttgtga caaacttcag ttatgctaca
    18961 tgatcgaggt ttttaaatat ttccgaggaa atcgttagcc tatacaatca tcaaatgata
    19021 cttataaata acatatatcc tctaatcccc actatctaaa aggaaataat tcccacacaa
    19081 cataaccacc tcaaaacaaa taaatcaata tagatatgtc acctatactt atcccccaca
    19141 tttcattcca caccaaaaag aacagatgac aatcgtaaag atttatcacc tgctctaaat
    19201 attatttcaa atactatcat caccaaaatc gacaattata gttcttgttt gttaaaaatt
    19261 ttaatagaca atatataaga aacgctcgtt ataactatac caatgaccgc atatgctatg
    19321 acaactagcc atccttcagt gctaattttt tcaaattcta atgcagatgc accactaacc
    19381 ataccatata taaagaaaaa gaccacgaaa gaaataagta gtagtataga tgcacatatc
    19441 ataatgacat tggagttttc agcgccaaat ttaaatgtca atgggaaaat gatagagtat
    19501 gcccctatga taccaaaact cattaaacct gacataatac caatcatcac actttgggtc
    19561 acaatcgtag tcacaactaa tccaatcatt aaacttgcac cgaataagat taaataaaag
    19621 gcaaagtatg acttaatata atcactacgt ttaaccggta aagtagatac ataatacatc
    19681 catcttgagt ctttttcatg tttaatatta tcagtaatag gtgtgattaa cataacccca
    19741 gccattgccg aactcatcaa cggattaaat actgcaaagt atcctgcagc tataatagcg
    19801 actataaaat aaatatatgt ttgctttctc gttgcataaa aactacttag gaacatacct
    19861 ttcattatac ttcacctcgc attatgattt ttgtagcgtc atcaatgtgt tttaaaggct
    19921 ctgcattttc aatttctgca taatctttaa ctaaaatttg atatttcccc tttgacaatc
    19981 tagaagcaat gattaaatgc ttaggaattt caacatcttt atcttctgtc gtaacaattc
    20041 catattgtgc taaaagtata tctttctgtt cagttaaaat cattcgtcca tctttcataa
    20101 acactaattt atcagctaaa tgttctatat cttcagaaat atgcgatgat attaagatgc
    20161 ctccaccttg tgcgacaaaa tcttctagta tttccattac ttcttctctt ccagaaacat
    20221 ccatacctgc agttgcttca tctaagatta ataacttcac atcatgagaa agcgcaatcg
    20281 ttaaagctat cttcattcgc atccctcttg aaaaagtttt aattttagtt tgtagtggta
    20341 actcgaaata tttgattaaa tcaaagaatt tttgactatt ccaagtcata taaatagatt
    20401 gaaatacttt atcaatatct ttaatagtca atttattagg cactctcaaa tcatcaaaca
    20461 ctacacctat gtgttcttta tattcgacat catccacggt atgttcttct ccaaaaaatg
    20521 tgatactacc gttatcttta tgtcgattgc ctactagaat attaattaat gtcgatttac
    20581 ctgagccatt tttcccaatt aatccaactg tctcattagt agaaatcgtt aaagatgcat
    20641 cttgcaattt aaaatccgaa tctttgtatt gtttgttcac actatctacg tttaacaatg
    20701 ttgtcatatc catgctcctc tttgtttaat tttaataaaa acgtcttctc ttcaataaat
    20761 aactaaaggc gttatatatg aaaatagcaa tgataagtag caaactaaag ctttgattaa
    20821 ttccagtagt aattgaataa agcccaatta ctacaatggc tagtatcaat attgataagt
    20881 tgatcgcata tgttttaaat aatgcaatta attctatatg gcgttcacct tcatccaata
    20941 tttccaatcg cttttcagtg taattcttat ctgcaatttt tggtattctg tcatcaaacc
    21001 ttctattaaa cagtgtaaat tgtgtattga aaatagcact agcaaaaaat ggtattaaaa
    21061 agaatagtat tgcatttgct gcagcgtgcc ctaccacaaa aataagcaat actaaaaaag
    21121 caataactgt ctgcagaata cttaatatac ttccatttaa aacataacga ttcgcaagca
    21181 actcatattg atctgttgca tcgatatcta cctctttatc tacaagttgc ttatacttca
    21241 atgcacgtct ttgattcatc aaaacaatgg cttctaccaa tatgataata atcgtcgcaa
    21301 caatcgatat tacaacgaca ttgttatatg tcgcaaacgt caagttctca ataccaaatc
    21361 catcaaaatt acctaaaatt ccacctatga taccccctac aagtccaccc agtaaaagat
    21421 atccgatata tcttagtatt ttcatgcctc atcctcctca ataataaaaa cagtttccac
    21481 cgtttcattg aaaatgcgag caatttttat tgccgttaat actgatggca taaaattgtt
    21541 tcgctcaatt agcgatatgg tttgtcttga aacgcccgct tgtttagcaa gttgcgtttg
    21601 gtttaagcca tctcgtgctc gtaattcttt caatcgatta cgcacatcgc atcaactcct
    21661 taattacact gtaaatgata tgcgtctttt tgacaactat atttgtcaaa tctacacaaa
    21721 aaaatatgat tatccaccta tgtatgacat tttgaaacaa acacctcaac gcctacaagt
    21781 cataattgtt tactttcgtt acaccttcct gcataattaa cagcattcta attttagtat
    21841 gatgcacgca ttttcactaa atcaaaccat tcaaaggaga ctattatggc atttacatta
    21901 tctgcaattc aacaagcaca tcaacaattt actggtgttg actttccaaa actattcaaa
    21961 gcttttaaag atatggggat gacttacaat atcgtcaaca ttcaagatgg cactgcaaca
    22021 tacgtacatc aatcagaaga tgatatcgtt acgtcatctg taaaaagtaa tcatcctgtt
    22081 gctcaaaaat caaacaaaac aatagttcaa gacgtcttaa ctagacatca acaagggcaa
    22141 acagattttg aaacattttg tgatgaaatg gctgaagctg gcatttataa atggcatatc
    22201 gatattcaag cgggcacttg tacttatatc gacttgcaag accaagctgt tatttcagaa
    22261 ttaatccctc aataaactat atttatagca acattttaat tatttcataa aattttattg
    22321 ataatcatta tcgttcggta taaagtaaat actatatact acttatgagt gaggttgatt
    22381 atcatgataa ctaacacttt tattttaggc atcacaggcc caacaagtct tgtcgtcatt
    22441 agcattatcg ctttaattat ttttggtccg aaaaaattac cacaatttgg ccgtgccatc
    22501 ggttctactt taaaagaatt taaatctgca acagaagatt tagataaaga gtctcacgat
    22561 acacccagta aggaatcgaa acaacagcga gagcaatagc actgaccaca ccttactggt
    22621 tcactttagc gaactacgcc atcggttagt aaaaatttta ttgtcgttcg tcattacggt
    22681 catcgtcgta tatgtttcat cattttggtg gatgacacca ttcataacgt atattacccg
    22741 tgcacatgtg tccttacatg cattttcatt cacagaaatg atacaaatat acgtgatgat
    22801 tatatttttc atcgcgtttt gtttcatttc accagtcatg ttttatcaat tgtgggcatt
    22861 cattgcacct ggattacata ataatgaacg tcaatttatt tataaatata gttttttcag
    22921 cgtgttatta ttctgtgctg gcgtcgcttt tgcattttat gttggctttc caatgatcat
    22981 tcaattcgcg ttaaaattat cattaacttt aaacatttcg cctgtcattg gctttaaagc
    23041 atatttgatt gaactcatac gttggttatt cacatttggt cttctatttc aattaccaat
    23101 attatttatg ggtcttgcaa aattcggtct tatagatacc acatcattga aacattatcg
    23161 taaatatatt tatttcgctt gctttgtatt agcaagtatc attgcaccac ccgatttaac
    23221 attaaatata ttactcacat tgccactcat attgctcttt gagttcagta tgttcatcgt
    23281 taagttcaca tgccgaggca aaccgccaac acattaacct tatacgaatc aatgctgtga
    23341 ttatcgttat actgcaatac cgaatatttc caatatagca acaaaaaaaa caggcactcg
    23401 gcctgttttt tattttttaa atttaaagat taagatagca actaccataa tataagcacc
    23461 ttgtgctatc aatggttcat aacttggata aaagcccaac cagttaatcg ttgggaatcc
    23521 ttcaataaca tgtcttggca tcgcacctaa taattgtaac ttttgaatac ttacgccaag
    23581 cattttgaat cccataataa aaataaagat cgacaacact ctaaatatat agaaaatagg
    23641 tattaattta actataaatc taaataataa tgcaaagatg attaaaataa cgatagctaa
    23701 agcaatacca ataataaaat ctttggtcgc tagctcacct atcatcccca tatagaaaat
    23761 gataacctcg acaccttcac gcaacacaga tattaaacca atcgtcgcta acaataccaa
    23821 attaccatta ctaatcgcat tagcatacat atttttaatc atgtcattcc aacgttttgc
    23881 atttgaacgt ttgtgcatcc aaacaccaac gataaacatt aatatgaccg caacgatacc
    23941 taatcccgct tccatacttt cacgaagaat gccactattc cctaaagttt ctacaaacgt
    24001 aattgctaag ataatactca gtacaagtcc ggcaattgca ccaccaatca cacttgcagt
    24061 ccctttctta tcttttacat tacgcgtcat ggtagtcaat gtcattacaa ttaacaacac
    24121 ttctagccct tcacgtaaaa agataatcat cacatcgacg aagctataac tatggccaac
    24181 aacctcttta atttggttat ttaaatctac taaaccatct ttcacatgtg ctttattatg
    24241 ttcgtctaat acactttgat aatatggtat tttatcttca attttcgtat acaaagcacc
    24301 gtctttagtt tgaatttgac cttcaacata cggccaagtt tctataaaat gtgtaagcgc
    24361 agcatcagca tccgacaatt gattgtcgtc gatagcttta atcgccttct ctaacgcatc
    24421 atttaattgt gatacatggt attgatcatt tgcagacgta ttactttttt tatcgacatg
    24481 atcaatattt gatttaaaag ttgtccaagc atgtgacact tttgccgtat ctaatggtga
    24541 cttatgaatt gcaattctaa gttgtaataa tgcgacttca atttgtccat attgatttgc
    24601 gtcataattg cgaatcactg tttcattact tgtccaaatc tgattcaaac tattgttcaa
    24661 agattctaat tccgctttat ttttatcttt aatcgctttt gtcatcgcag catctttagc
    24721 atcgacttgc tgttgcaata gtttaatttt agaacccgca tctttactag ccaatttctc
    24781 ttcataagca attaatgact tcgttaattg cgaaagtgta tctttttgat tatcattcgc
    24841 ttttgcatct tcaagctttc tcacatctga tttgacagca ttactttcac tattatcttc
    24901 aagcgataat ttcttaactg cacttaccac ttgctcaatt gctttctgct tattgtcatt
    24961 cgatatcgaa ttattagaaa gtgcagattt cgcatccgtt atcacactat atacatcact
    25021 aatactttgt tgttctgctg cctgactttt cagtaaccca aagctacaca ccatagcagc
    25081 agttattagc attgctacaa atttagtcaa ataatgtttc accaaggtat cctcccttac
    25141 taacacctgg taatactaaa aatgaagcag aacctctatg tgtaatatat tcatttaatt
    25201 tatcattact acctaaatta ttttgtatat cgataaattg ttttgtcgct ttttgaaaag
    25261 caataaaaag taagcctgtt tcgaagttac ctgtgcggtc atccgtacca tccacataat
    25321 taaaggctct acgtaaaatt gacgtatttg cttctttcgc tagcctcgta tgggcatctt
    25381 tatcaataat atactcgcca tgactatctt tcgcttttaa gtcaatttca tcaaactctt
    25441 tcccacctgt taacggtgca ccactatgtc gtttccgacc aaatgtagcc tcttgttctt
    25501 ccagcgcagt acgatcccac gtttcaatgt gtatttgaat acgtctgaca acgcaataag
    25561 ttccatgttt cgcccatccg tcatcaataa acacataatc tttaagttga ttattcttcc
    25621 taggattaat tgttccatct ttaaatgcca ttaaatttct aggtgtttcc ttacctttag
    25681 cagagataaa accagattgc gcccaacgta ccttaacaat atctcgaaat ggacgaacta
    25741 aattatgaac cgcatgaaag gatacttgcg aatcatttga gcatgcttga atcataatat
    25801 caccatcgct gtaatcgtct attaactgat cattcggaaa atgcggtaaa tctttaaagg
    25861 catcgggaat tttactagat aacccaattt tcttcatcaa agacttacta atcccaaagg
    25921 taatcgttaa cttgcttgca cctaatccta tcgattcacc ggtatctact ggtggcatta
    25981 aaggattgtt actcggcttg ccaactgtat caccatccat catacgatca gccataaccg
    26041 tccacttttt aaacattgcc ttaattgcat ctctatcttt tgacttcaaa tctaacgcaa
    26101 cgaaattgca tgttttttgc gtgggtgtgg taatgcctgg ttgcacttta ccataaaatt
    26161 catacgcatc tttttccgga tcttctggtg tattgaacat tgatttgaaa gaccacatgc
    26221 taccaacacc acttgcgcca attgcaacac cggcaccgcc aatacctaac attttcaaaa
    26281 atgtacgtct tgaaaattgc gtactatcgt taacttgttc ataatttgtc attcagtaat
    26341 cacagccatt ttacttagtg gctctcctaa tgcattaaca gcatccgcaa atgctttacg
    26401 gtctttcttc gatacttttt caaatgactc ataaccgccg ttgttatctt tatatttatc
    26461 caataattga ttcactttat cgaagttcat ttgaatatca tcacttaatt ttttatcttt
    26521 tttctctaaa ataggtttaa ataagtcata aattttttgt gcgccttcaa cgttcgcttt
    26581 aaaatcatat aaatctgtat gtgaataaat ttcttcttca cctgtgattt tagaagttgc
    26641 aacttcattt aataggtcaa cagaaccttg taacattaat tttggtgtga tatctaatgt
    26701 atcagctttg gcatgcaatt cttttgcatc tttcaataat tgttgtgcat cttttttagt
    26761 cacatcatca attttcttat cttcgtataa tgctttttca atcttatgat atcctgacca
    26821 ttctttttcc tttttctctt ctttcatatc tgcaagacgt gcatcaattt taggatctaa
    26881 atctccaaat gcttctgcaa ctggttcaga gcgttcataa tacatacgaa cttttggata
    26941 taacgctttt gcttgggcca tatcattatt ttcaatcgct ttaacaaatt tttctgtacc
    27001 ttttaaaaat tcatttaact gttcatcagt atatttatca tatgcttttg ttgcttgttt
    27061 taattctgct ttaacaccat catctttttt cgatgtcttt gaatcatcct tcttactatc
    27121 gtcgttccca catgcagcaa ttaataacgt tgatgctaat aatagcgttg ttaacttttt
    27181 cattttgaca cctcattata gaaattctat tatccccata gatgtgttct tataaatatt
    27241 attttcgcat tccctacacg ctaaaataat acattacact taaaacggct gttttaaagc
    27301 atcctcccat aaacatcatc tagttgataa taattatcaa aatcattata ttgctataaa
    27361 ataatactgt caacaacctt ttattttcaa aaattaaata aaggagcgct gccattttaa
    27421 atgtcatcac tcttttgtaa gtctaatttg tcatttttgg tcgtattctg attttaataa
    27481 actatagatg taactcgatg aataaatacc atttagtaat tcattgtcac gtaacatacc
    27541 ttctctagta aatcccagcc tttcaggaat agcccggctt ttttcattat taactgcggc
    27601 actaatctca attcggttta agtcaagctc ttcgaaacaa tactttatca atgcctcaac
    27661 tgcttgtgtc ataatcccat gaccctcaaa ttctttatct aaatagtacc ctaatgaagt
    27721 ttttctgtgc atgtgattaa tttcatgtaa accgatgaca ccaactagcg ttccttcata
    27781 ccaaatgcca cactgaaatc cattaccatc agcaaattgc aaaagtcctc ttttaataaa
    27841 tgcacgcgta tctgatggtt gctcagttgc atctacccaa ggtaaccatt ccctaagtga
    27901 atttcttgaa cgattgacta aattgaaaag cgcttctgtg tcatgagctt ctaaaatttt
    27961 taatgttatt tgttcattca ctttcattcc aaacatacca tcacatcctc attcattttt
    28021 catataattc tgtaaattat cattataata acatattaat gttacgcatt gtatcttaaa
    28081 tttgttgtcc ttccccaact tgcattgctt gtagaatttc ttttcgaaat tctctatgtt
    28141 ggggccccgc caacttgcat tgtctgtaga aattacggac ccaatttctc tatgttgggg
    28201 cccatcccca acttgcacat tattgtaagc tgacttttcg tcagcttctt tgttggggcc
    28261 ccgccaataa gcgttgtagt gcctattact ttgattgatg tccaagtttc ctatcacaca
    28321 acttaattta atcactactt tattattcat tccaaattta tatttaaaaa tacgacaaaa
    28381 cagtgctaaa atgctattaa aggaggcact gctcatggca tcattgaaaa ataagcattt
    28441 tatgattggg ctatcactaa catttatagt cgcattattt agctttttag cagctaaatt
    28501 gccaatccta gataaggttg gcgcattaac tatcgcgata ttaatcgcta ttctatatcg
    28561 tcactttaga ggatatcctg aacaatatag ctcaggtatt acgttttcat ctaaatattt
    28621 attaagattt gcaatcatcc tatatggact taaactcaat atattcgata ttatcggtca
    28681 aggtagtaaa ctattagcca tcgatgtagg tgtcgttatt ttcagtattg taatgatgct
    28741 ctttgtcaac aaactgttgc atggtgacaa aaacatcgca ttattactag gtgtcggcac
    28801 aggcgtttgt ggtgctgctg ctattgccgc agtcgctcca atattcaaat cacgtgaaaa
    28861 ggatacagct attagtatcg gtatcatcgc attgattggt acgatatttt cacttatata
    28921 tacagctatc tacgctatct tttcaatgac gacaaatgtt tatggcgctt ggtctggtgt
    28981 tagtcttcat gaaattgcac acgttgtctt agctggtggc tttggtggta gtgatgcact
    29041 taaaattgca cttcttggta aacttggtag agtattctta ctgattccat taaccatcgt
    29101 acttatttta attatgcgtt tccgttcatc agaatcatct agcaagggtc gaataagcat
    29161 tccatacttt ttaattggat ttgtcattat ggccttagtg aatacatatg taactattcc
    29221 gtcagcattg ctaaatattt taaatactgt atcaacaatt tgcttattaa tggccatggt
    29281 tgctttaggg ttaaatgttg catttaaaga tcttaaaaat cgcgcactta aaccgcttat
    29341 gacaatcatt attacctcaa tatgcttgtc atcacttgcc tttatcgtcg ttcattggct
    29401 atatagttaa tatgaaaaga cgctcaaaca cttacaaatt tagtgtgccg agcgtcttat
    29461 ttttatactt taaaagtcgt attggttgtt ttcttcttca aacacttgtt gttgtacttt
    29521 ggcagttcgc attgtggatt gtgccaacgc ttttaaccga aatacaacat catcattgac
    29581 aatttgttga tttgaaaaat ctttctcttc aataaataca tacgtttgca tcgtatgtgc
    29641 tttcatgtaa ctcaatattg gttttaaatg catttcagga attaaataat gtttactaga
    29701 acctgctgtc gctacaagtc ctattacctt gtcacgaaac gcattgactg gaagtagatc
    29761 aaacacattt ttcaaagcac cagggatgga agcttgaaaa attggaaaac caataaaaat
    29821 cacatcagcc tgcattaacg acgtcgttaa tttatataca tctcctgtag tatctagata
    29881 attctttcca acgctaaatt ctaattcaag ttctcgtaaa tccatcaact ctatttgatg
    29941 tccctcattg atgacttcta gttcattttt taaatcatcc atagcaattc tcgttttaga
    30001 acctactgtg gaacctgaca ataatacaat attcatgatg acgcccctcc tattttgata
    30061 aatgcttttt aatcgccggt ataatgtcgt tgccaattaa ctcaatattc ttcataacat
    30121 tttcaaatgg cacaccgcca aaatcaagct gtgccataaa acgttgatga ccatacaact
    30181 cgtgttgata caatatcttt tcaataattt gttgcgggct tccaaccatt agcgcttctc
    30241 gataatctga cgaattagca aattgctgtt tcggataacc aacaccacga ataaatgaca
    30301 tccctgtatt caaatgtgga taaaattctc tcatagcatc ctgagttgtt tcagctgtat
    30361 aaaacagact cgctgtactt actggtaaag acttaggcga agcatcgaaa cctgcttcag
    30421 ttgccgcttg acgataagca tctatagaac ctttaaagtt cattgctggg ccaccaaggg
    30481 ttgtaatcat cattggcaca ccttgttttc ccgctttaat agcacttgca ggtggaccac
    30541 caacagcacg ccatattggc aatatattat cgattggtct tgggaatatt ttcatatttc
    30601 taagttctgg acgatatttt ccagaccaag taatacgctc agttttattt aactctaaaa
    30661 gtaaacctaa tttttcttca aacaattcat catagtcttt taaatcatag ccaaacaagt
    30721 caaaaatacc tgttcttgat gctctgccag ctacaatttc ggctctacca tgagaaatca
    30781 aatctaatgt cgcgaagtct tcaaatactc ttacaggatc tgttgcacta ataatcgttg
    30841 aagaacttga aactttaata tgctttgtcg cttgggcaat tgcacctaac acaaccgtat
    30901 gtgcctgtgt tgtaaaatgc tcctgatgac tttcaccaac tgcaaaaaca tcaatacctg
    30961 cttcatctgc taatttactt gcttcaataa tttcattaat acgttgctca taactaactt
    31021 tttcaccttt caatggattc aataaatgat cacctaagga atacaaacca aactcaagag
    31081 gcgtattttt attcatttct aatttggcca ttaaacattc tcctttatat ttcgtgtaac
    31141 ttactttcaa tttgttcacg ttctgcttct aaaaagtcag gcaagttcaa ttgacttcct
    31201 aattgttcaa caggtgtatc aatagtaaat ccaggcgctt cagtcgcaaa ttcatacata
    31261 attgaattat ggcgatagta taatgattta aagaaatagc gatcaattat acctgaatta
    31321 ctttgtggtt gttgttgtaa tttcttgtaa attgcatcta agtcactcat ttgtggtgta
    31381 ttaactgcaa tatgatggat ataacctcgt ccaggtcttt cacgttgtcc ctgttgctca
    31441 ataactacaa aatccgaata taaaccttgt ggtgctaatg tcagcacatc gaatgattta
    31501 ttatctcttt tgcgataatc taagacattt tccaaaaatt ctaccgtacg cgctgcattt
    31561 ctaactctta attcgactgg ccctattcct aaaatttgat atgcttgagg tatttcacta
    31621 taagcgttat gttgccattg atgtggtact tcaaaactat cattaacaag caatatgatt
    31681 tctaagtcgt cttcatcttt aaagacaaca ccttcttgtc caagatagta caaacgttca
    31741 gacttaatac cattattctc aagacgtttt tcaaaataat gaagtgccgc ttgatttggt
    31801 actaataatg aaaatcgata aatcgtttca gtacctggct gcttatgacc cgcattggga
    31861 atttcaaaaa agcttaaaat tgttccggct gtacctactt cgtccccata aaacaaatga
    31921 tacattgaag gattgtcttg attaaccgac ttttcaacta atcgtaatcc aaggacattt
    31981 gtataaaaat ccttattacg ttttgcatct tttgtataca tggatatgtg atgatgccct
    32041 actatattca tactatccct cctattagta taaattttat accagcttac ataaaaaaga
    32101 tagttatatg ccatttaccc cttgcaaata aaaatatgtt tgtactcatt cgtagataca
    32161 cagctagtat gtataacgac ataataattg cataattata aatttatgtg tagcaattta
    32221 ttttttctaa atgtttataa aatacttcaa taactaaata tgcaagattt cacaaaagca
    32281 tattgacaac gctttcatac atgtctaata taagtttatc gcacaaaatg catataaata
    32341 catattaagg aggattttat gaattttctt aaacctgcaa agcatattaa gcctttgcca
    32401 gaaaatcaga tagatgatac ctataaacga ttacgtctcc aagtatttct tggtattttc
    32461 atcggttacg ctgggtacta tttattacgt aaaaactttt cgttagcgat gccggcattg
    32521 caagagcaag gttttacaaa agcggaacta ggttttgcac tttctgctgt ttccatcgca
    32581 tatggattta gtaagttctt tatgggtact gtaagtgatc ggagcaatgc tcggatattc
    32641 ttagttcttg gattagcact cactgctatc gtcaatttgt taatgggatt tgtaccgttc
    32701 tttacatcag gtatcggtat tatgtttgtc ctattattct taaatggatg gtttcaaggt
    32761 atgggctggc caccttcagg ccgtgttctc gttcactggt ttagtgtaag tgaacgcgga
    32821 agtaagactg ccctttggaa cgttgcgcat aatgttggtg gaggtattat ggcacctatt
    32881 gctgcttggg gtattacaac aactgcattt atcaactttg gttatttaaa aggtttcgaa
    32941 ggtgtattca tttaccctgc actcttagca cttatcattg ccgcaatttc atacgtattg
    33001 attagagaca cacctcaatc tcaaggttta cctccaatcg aaatttataa aaatgacttt
    33061 gctacaagcg ataagaaaac attagaaaca gaattaacta caaaagaaat tttatttaaa
    33121 tatgtactga acaataaatg ggtatgggca attgcctttg caaatatatt tgtttatttc
    33181 gtgcgttatg gtgtacttga ttgggcgcca gtctacttaa gtgaagaaaa acatttcgac
    33241 ttaaaagcat caggttgggc atacttctta tacgaatggg ctggaattcc tggtacatta
    33301 ttatgtggtt acatttctga taaattattc aaaggtcgtc gtggacctgc aggtttcttc
    33361 tttatgttag gtgtcacagt atttgtatta atttattggt taaatcctcc aggcaatgct
    33421 tggttagaca atgtctcatt aattgccatt ggtttcttaa tatatggacc agttatgtta
    33481 attggtttac aagcattaga ttatgtacct aaaaaagcag ctggcacagc agctggatta
    33541 acaggattat ttggttatct gtttggtgct gtaatggcca acatcgtctt aggtgctgta
    33601 gttgataaat tcggatggga tgtcggtttt attttattaa cagcaattag tgtgtttgca
    33661 atgttgagct ttatcctcac ttggaataaa gtaggacaag aaaccgttca tcattaaatg
    33721 ataaaaaata aagtcatatg gttatcttat cgaaagatga tatattcatc tcttataagt
    33781 tcaaccatat gactttttat tagtattcaa aaaaatattt acattgccac ttttgtgttt
    33841 gccctgctgt tttattcaat tgattacacc acttaggata aactctaaaa gccattttcc
    33901 cttgatactt agatgaagct aagatacctt tttctaccaa taattcccta ggaaatagaa
    33961 agtagccatt taattcatca tcgataacag caacaatcag gtaatcagca aactcttcaa
    34021 ttttgtatgg ccgattataa ttatcttcgt cttttgtcca acatgtcacg aaatatcccg
    34081 atttagtcgg tgttttctta gctaacctac tttgatatgt ttcctcttta aagctaaatg
    34141 ttaatgcttc gtaatcttga ttatattttt cttcagttaa atctttaact tctgattctt
    34201 cactaaaaat atttttcaac agtattttag atttacacat atgccaatct cactttattt
    34261 tttcataatc gtatcatata tttatttttt tcgaaaaata cacttccgac cgaaatatac
    34321 tcagccagaa gtggacgaaa tatttaacct tctattaatt cagatgtatc aactgtcaaa
    34381 cgatcacgta ataaatagac gattaacatt gctgctaaag cacaaagtga ctcagcaatt
    34441 aataatgacc aaatgacacc tgttagtcca aacaaagcat tcataataaa taatactgga
    34501 atgataattg caccttgtaa aatggccata attgtagcac cacgaccttg cccagtcgct
    34561 tgaagcatac cagtaaacaa gaaacctata ccatttaata ataatgatgc cattgttact
    34621 ttcaaaataa atgtcgccat ctcaacaatg gcttgatcag tagtaaatag tccgaccata
    34681 tgatgtccaa ttgtaaatac agcactcata catacaacaa agataacgcc gatagacatg
    34741 ataactgctt tgataacgtc tttcatacgg cctttatttg ccataaagtt atatgcaatt
    34801 agtggtacaa caccttcaca taatcccatg ataataagtt ctggaaattg cacaagtcta
    34861 aatgagatac cataacttgc aatcgcgaag tttccataat gtgctaaaaa taaatttaaa
    34921 actaatcctg tgaatcccat taagatactc attaaaaatg caggaatacc gattttaaag
    34981 atttcagaaa gcatttcttt attaggtttc gcaagtttaa tattaactga cacaacgtca
    35041 ctatttttca taaaataaat gataaagaac agagcagcag caacattact gattgcagta
    35101 cccaaagctg caccaacaac gtttaaatca aaaccaaaaa ttaaaattgg atctaaaata
    35161 atatttaagc ctacactagc taacatacca atcatagaaa ccattggtgc cccaattgca
    35221 cgtgcaaatt gttctaatat gaagaacaaa attacaaaag gtgcacttaa aaacattact
    35281 ttcaaataat tacttgttaa agctaacgtt tcacctctcg cccctaaaat tgctgcgatt
    35341 tgatcactga atggtaaagt aactaaaatc acgataagtc ctagtgcaat accaccataa
    35401 atagagaaac tacttacaaa tttactctta ctatagtctt tcgcacctaa taaacgtgaa
    35461 atataagttc ctgcaccaac gccaaataaa ttacctaacc ccattaagat agcaaatact
    35521 ggcagtgtta gagagatagc agaaatcatg tggctatctt ctaaaaatcc tataaagtaa
    35581 atatttaata tgccataaat aacgcttaat aaagtcccta tcatcattgg caatgagaaa
    35641 tgcatcatcg ctttaaatac tggcgatttc tcaaaataat ataattgttc gtctttcatt
    35701 gttcaatact ccttgtcttt tccaataatt agcttactaa caattagata tctaactata
    35761 atattaaaga caaagtgact gatttctacc agtcacactt atcatttatt gtaaactaga
    35821 taacatttta gttaagtttg ctttcatttg ttcattttct tcttcagata actgcgatac
    35881 gagtgtttgt tccatttcat caaatatcga agtgaatgct tctacgagtt taatcccaga
    35941 ggtagtcagc cctatattct ttcttctcgt atcttgtgca tcgacatagc gatagatcag
    36001 ctttttacgt tcaaggttcc ttaataaatt actgacagtt ggacctgttc gttgtaatgc
    36061 tttagcaata tcattttgtg tcagtccatc ttgttgatgt gcataaagat aacctaacgt
    36121 atgaccttgc tcatttgtaa tatcaaattg ctctaacttt tgatcagcct tttgtttcat
    36181 ctcatgacta atcattctaa ataaatacga ataagtgaat tccatttatt gcaccaccat
    36241 ttcgttagat gtctaactaa atatactgcg acatttttaa attgtcaaca tgaatatcta
    36301 atttatttta aaagttccta taaaatcttg cgccataaac attttgatat gcaatttttc
    36361 ggattaaaat atgaaagaga ttgcatatct acgtttttaa gaaatcgctt acaattacaa
    36421 ataggaggat attacgttgt taagttatag acaaatcgaa attttgtatc ttttaattca
    36481 tgagcaaacg tttattccaa tcaataccat tgctaatcaa cttggtgtat cacctcgtac
    36541 cattcaatat gatatagcat atattgagca atatgctgaa acttatcatt accaagtcag
    36601 ccgtaataaa gctgcaggca tcaaagtaac aacagctcac gcgacactat taaatgaatt
    36661 agagcacaat ctaacaaatc aaattcattt ttcaaaagat gaacgactca cacatatcgc
    36721 tttaaagtta ttcgaaacaa ccgatcctgt ttcaacaaag caacttgcgc aagatgttaa
    36781 tgtttcgcgt cggacaattg cagatgatat taaaatgatt caagcccaac tagatcaata
    36841 ccatttaaag ttaaattatg tccacaataa aggattcaat attattggtg aggaagatca
    36901 ttatcgtaaa gcgtatgcac actttataca tcaatatatg aaacaagctg caccttttat
    36961 agaggcggat atctttaatt cagaatcaat cgcattggtt cgccgtgcca ttattaagac
    37021 attaaatagt gaaaattatc atttagttca gtcggctatc gatggcttaa tctatcatat
    37081 actcattgcc attcagcgtt taaatgaaaa tttttcgttc gatataccta tcaatgaaat
    37141 tgataaatgg cgacatacta atcagtatgc tattgcttca aaaatgatag aaaacttaga
    37201 acgcagttgt aatgtcacat ttccagagtc tgaaattatc tttatcacgt tacatttact
    37261 aggctctaaa atgactgaac atacagcatc ttcaattacc tttgaatacc atgatttatc
    37321 gcaaaatata catgaattga tcacttgtgt tagccaagaa ttaggcattg atatgtcaaa
    37381 agacaacaag ttacatacca gtctgatcac acatatcaaa ccagctatac atcgtattaa
    37441 atacgatatg ctacaaccta atcctttgag gcaagaagtt atgcgtcgct atcctcaaat
    37501 cattgaagcc gttagcaagc atattagtcc aattgaacaa gatgctgcta ttcgcttcaa
    37561 cgaagatgaa ttaacataca ttacaattca cttcgcatca agtatagagc gtgttgcaac
    37621 acataaacaa tcaatgatta aggttgtctt actatgtggt tctggtatag gcacgtcaca
    37681 acttttaaaa tcaaaactaa atcacctgta tcctgagttt cacatttggg atgcctattc
    37741 catttatcaa ttggaagaaa gtcgattatt gcaagataac attgattatg tcatttcaac
    37801 agtaccttgt gaaatatcag ctgtaccagt tattcatgtc gatccattta tcaatcaaca
    37861 atctcgtcaa aaattgaatc aaattatcaa tgactcaaga gaacaacgag tcatgaaaat
    37921 ggcaactgat ggcaagtcac tcgcagattt attgcctgaa catcgcatca ttataaataa
    37981 acaaccatta tcaattgaat ccgcaattgc agtggctgtg caacctttaa tcaatgatgg
    38041 cattgtctat tcaaattata cagctgcaat tttaaaacaa tttgaacaat tcgggtcata
    38101 tatggtcatt agtccacata ttgcacttat tcacgctggt actgattatg tacagaatgg
    38161 tgtaggtttc gcactaacat atttcactga agggattatc tttggtagta aagctaacga
    38221 tcccgttcac cttgtaatta cattagcaac ggaccacccc aatgcacatt taaaggcatt
    38281 gggacagtta agcgaatgct taagcaacga cttatatcga caagatttct tagatgggaa
    38341 tatttttaaa attaaacaac acattgcttt aactatgaca aaggaggctt aataacgtgt
    38401 cattagacat tttgtcaaca acacgcatca ttgtaaaaga acaagtaaat gattggactg
    38461 aagctataac tatagcttct cagccattac tacaagaaca aattattgaa caaggctatg
    38521 ttcaagcaat gattgatagc gttaatgaac ttggacctta tatcgttatc gcacctgaaa
    38581 ttgcaattgc acatgcaaga ccgaacaatg acgtacatca agttggttta agtctattaa
    38641 agttgaatca acatgtggca ttttgtgatg aagatcacta cgcatctctc atttttgtat
    38701 tgagtgccat cgacaatcat tcacacttat ctgtattaca aaatttagca accgtactgg
    38761 gcgataacca aacagtccag caactattaa ctgcaacaaa tgcacaagac attaaaaaca
    38821 ttttaaagga gcatgattaa tatgaaaatt ttagtagtat gtggccacgg tttaggaagt
    38881 agttttatgg tagaaatgaa cgcacaagaa gcacttaggc aacttaatgc accatctgat
    38941 atcgaagttg aacatagtga cattatgaca gcaagtccag agatggctga cttgtttatt
    39001 tgtggtagag atttagctga aaatgccgaa cgtctagggg atgtcttagt tcttgataat
    39061 attttagata aagctgaatt acaacaaaag ctctcagaaa aattacaaca acttaacatg
    39121 atttaaagga ggtacgacct atgcaagcaa tccttaattt tatagtcgat attttaagtc
    39181 aaccagccat tcttgttgca ctgattgcct ttataggttt aatcgttcag aaaaaacctg
    39241 ccgcaacgat cacttcagga accattaaaa cgatattagg cttcttaatt ttaagtgcag
    39301 gtgctgatgt cgtcgttcga tctcttgaac cattcggcaa aatattccaa cacgcatttg
    39361 gtgtgcaagg tatcgtacct aacaacgaag ctatcgtctc actagcctta aaagattttg
    39421 gaacaacagc tgcactcatc atggtctgtg gcatgattgt taatatttta attgcccgct
    39481 tcactaattt aaaatatatc tttttaacag gtcatcatac attttacatg gctgcgtttt
    39541 tagcaatcat tttaacagtc agtcatatta aaggctggct aacgattgtt atcggcgcac
    39601 tcgtattagg attaatcatg gcagtattac ctgcattact ccaacctacg atgcgaaaaa
    39661 ttacagggaa tgaccaagta gctttaggtc attttggctc aatcagttac tttgccgcag
    39721 gtgctgtagg tcaattattc aaaggtaagt ctaaatcaac ggaagagatt aaatttccaa
    39781 aaggcttaag tttcttacga gaaagtacaa ttagtatctc gattacgatg gcattacttt
    39841 acttcatcgc atgcttattt gcgggcgtta gttatgtaca cgaatctatt agtgatggtc
    39901 aaaactttat tgtcttttca ttaattcaag gtgtgacatt tgctgctggt gtatttatta
    39961 ttttaacggg cgttcgttta atcttagctg aaatcgtccc agcatttaaa ggaatttctg
    40021 aaaagcttgt accaaattct aaacctgcat tagactgccc tattgtgttc ccttatgcac
    40081 aaaatgcagt attaattgga ttctttgtca gctttattac aggtgtcatc ggtatgttta
    40141 tcttattctt atttggtggc gtcgtcattt tacctggcgt agttgcacac ttcttcttag
    40201 gtgcaacggc tgctgtattc ggtaatgcaa gaggcggtat taaaggtgct attgctggcg
    40261 ccgctctaaa tggtatccta atcacgtttt taccattatt attcttgcca tttttaggcg
    40321 aattaggtgg tgctgcaaca acattctcag atacagactt tttagctgtc ggtatcgtgt
    40381 tcggtaacgc agtaaaatat atgggattat ttggtgcgat tctatttatt attatcgtag
    40441 gtgcgacaac aattttatta aaaggccgtc aaaaagaaca gcaatagtgt taacgtagaa
    40501 atataaaaca ccgtcacata ttgagtgaat gcccctttta tcaagaggaa agccacttac
    40561 ttatggacgg tgttttgtat tatattaaat gatacttagc catactatcg acagctgcta
    40621 aaattgcttc ttcttgtgtc gcaatcggtt cccaaccaag taatgttttt gcacgttcgt
    40681 tacttacatt gcggttcata tctaataaaa gtttaccttc tttagcttga tgattaaatt
    40741 tagcacctag actcaaaata aagtctggta attttttagt agaaactttt tgagctattt
    40801 caggtctctt ttctttaatt aattttgcaa tttccaacaa attaatttgt ccatcagccg
    40861 tcgcaataaa tcgcttgcca ttagcttgtt catttgtcat tgccaaaatg tgcagttcag
    40921 ctacgtctct cacatcaaca acatttaacg gaatttgcgg tacacgtttc attgaaccat
    40981 tcaataaatt ttctaataaa tgaaagcttc ctgaaacgtg tgcatctaat gatggcccaa
    41041 aaattgcaac tggattgatt gtggcaaatt ctactgttgt attttcattc tcaacaaaat
    41101 cccacgctgc cttttcagct aacaattttg atttttcata tactgataag cctggttcat
    41161 cttcatttgt ccaatgactt tcatttgtga ttgaattttt atctttatta ctaaaaccaa
    41221 ctgcaccaaa gtttgcagtc attaccacac gtttaacacc cgcatgttct gcagctctta
    41281 aaatacgttg tataccttca attgcaggct tcgccatcac ttctgcatcg tctgttttac
    41341 cgaaaaacac cggagatgct acactcaaga catacttgca atctttcatt gcttcatccc
    41401 aatgttcatc ttgtgataaa tccgcttcga caaacattaa tcgctctgtg gaaatgccat
    41461 tgtcttgcat tgttttaatt actttatcag ctttacttaa atcacgtatc gtcgtttgta
    41521 cgtcataacc ttgttctaat aatcgtgaaa taattcgcat gccaacaaac cctgtaccac
    41581 cggttactaa tactttatta ttcatcacat aatctcctct ttgtgtctat tgattactca
    41641 ttatagcagt cattatattt tgtatatatc aacagactta tattgcttaa tattctatat
    41701 gaattataaa agtaaacatc attatattcc ttaaaatatt aaactcatct attttcaaat
    41761 acccaatcat ttagaaacaa aaaccatata tatatcatac tttgaatagt taaaggcaat
    41821 aatttccact catatgttca accttcacca aacactattg tcaccttttc aagagcaagc
    41881 aaacacttcc aatgattcag catacataaa ataacaatat taacttaaaa tcatatccac
    41941 taatgcttct accgtaacat tgccaaaata ataaacgatg tctaattgct ttaactgatg
    42001 cgttaaatct tctcttgtca tttttgttcc ttgtaatgct tcttccacat cttttatatc
    42061 gccttgtcca aagaaatccc cataaatacg acaatctgcg atacgatttt gttcaacaga
    42121 aattgttatg tctaccgtac ctgaagataa tctttcactt cgattgtatt catatttggg
    42181 tgacttgcca taattccaat cccaattttt atacttttta tcagctaatt catcaatcgc
    42241 ttcccaatct gcatccgtta attcatatcg tttcgcctct ttaatgtcat cgattcccaa
    42301 aatctgcgtc accattaaat ttttaaattc ttcaatggtt atatcacgat acttttcatc
    42361 cagtgcttct ctaagatgac caacacgtgc gcgcacagat ttaatccctt tcgatgcaat
    42421 ctttttgcga ttaggcttta acactttatc cattgcttca taattaacat caagtaatag
    42481 cgaataaccg ccataaatac gattattcat taatgtcatt gcggcgcctg acactttttt
    42541 accattcaat gttaaatcat ttctaccgct ttgtaccaca tctgttgcac ctaatgtatg
    42601 caacgccttt atagctggtt gataaaatcg ttgaaaatca ccataaattg aagtgtcttg
    42661 ttctaaaata caacacatat taacggcacc tttatcaaca tacacagcgc caccaccagt
    42721 atctcggcga actacttgaa tactgtgttt atctatataa tcttgattca cttctatagc
    42781 agtattttga aaacgtccaa tttccacttt tggatcacaa taataaggga ataaaatatc
    42841 ttcatctaaa aagatatgct ggttaacata aacttgcata gcgagtgcaa tcgcaccatc
    42901 agtaatatat tctccatttc taatcggttc tattaagtac atcttctgtc tctccaatgt
    42961 tgttattttt cgttgtgctg tcgttccgga gtgctgctgt aatcaatgtt gagatatcct
    43021 cagttaaatg tatggtacgt tcttgaattg aattcggaat gcgatatgcc tttttattca
    43081 tcgtcatata aagggcattt tcatttttac gtgtcatacg ctgaaaagga tgcttcacaa
    43141 attgtggtgt agtataacca attccaattt ccaaatacaa cactttatca tcttgatgtt
    43201 gctctagaaa agcattataa cgatgtagtt gcgcatgaaa ttcagcatct tcaaccatcc
    43261 caacttccgc tttacgttta ttcacttcca ttggggcatc acattttgga catcttggaa
    43321 tcatctccca aggtataagc atatcttgtt gcgcaacaac cattttacga attaaatcat
    43381 cattgcgata cgtttgagca tgacaatgct gactacactg ttgcagtata tactcccctt
    43441 gtatatgaaa tacatgagtc atatcataat cagctacatc gaaagcatta tctgcattcg
    43501 tagttataat gtggtactgt ttaccttcca ccaaggattt taaagcgagg taagactgac
    43561 ctacaggttg atctaaatag tttaatgtaa taaaacgact ctcaaatgcc caatactctt
    43621 gccaactgcc ataaggatgt aaactcgctt gcaacatatc aaagaagcga tatttttcaa
    43681 taaaatctgg gaaattttcc gtaaaacgct ctcctacata tgtaaatccg tcagatgcag
    43741 acatgcctgc accaattcca atcactatcg catctgcttc atcaatcgca gtacgcaata
    43801 cttcagcctg ctttgtcttg tcatccatta acagagacat tgcattccac ttactactct
    43861 gcatcacggt taaatgcctc cttatacagt tgtaaatcct tatctgtaaa tacattgaac
    43921 acgactttca atgttgaatt tgtttctttg agatagcttt ctactgttcg aacagcaatt
    43981 tctgctgctt catcttgagg aaaagcaaat acacctgtag atatacagca aaaagcgaca
    44041 tgatttaaac tatgttgatc agccaattta agacagctaa gataacattt agctaacaag
    44101 tcctgattca tctttgaaac aggcaatcga cgtatttgcg gaccaaccgt atgaattata
    44161 tactttgctg gcaaattata tccacgtgtt attttggctt tacctacacc ttcattgcgc
    44221 ccttgttgtc gaatgatctc tgcacaatca agtcgaactt gaacacccgc ttttgtatga
    44281 ataatattat caatgcagtc atgattagct tgcatacatc ctagaaaacg actatttgca
    44341 gcattaacaa tagcatcgat ttttaacgtc gtgatatcac cttgccaaac aaagatattg
    44401 tcacctttta tcggcttcaa atccttcaaa tccgtaacat gttgacgatt caaatcactt
    44461 aacatagcat cttgtacagc taaatattca tcacttacag gtaatgccgg tctgacattt
    44521 gctaagcctc gatataattc ccacaaatct tcaaatgaag atggcattac caatacgtca
    44581 ttgtcatttc tctctcgatg catatcattg attaaatatt caagtctcgc tttatttgat
    44641 tttaacgttt ccatttaagc ctccggtaat gctaggaatg cttctttatc gacatcatcc
    44701 aatttgaaca accaattttc ttctggtttt tcagagttta aaattgtcgg ttcttcttcc
    44761 gcttttgtat ttcgctcaat aatcgttcct gacaatggcg tttgcacatc aatgaccgtt
    44821 ttcgatgctt cgatactcac aatttcatca tccactttaa cttcatctgg acttacgaat
    44881 tcaacataac ctactgtccc aatatcatct tgcaattcag gtgtcatact aaacacatac
    44941 aaatctccta ctttttctac ccataaataa ttggctaact ttttcatctt atcttcatcc
    45001 tttctcttct atttaaaatg ctacaaataa atttccgcga gtaattttaa tgttttacaa
    45061 cgctgttcaa tacctggaat aagcggtgct actaacacct catcaacttc aaacgtagca
    45121 atgaaatcat ctaattgtgc tttaaccttt tcttgtgtac ctgcaatgat gcgtgcttga
    45181 tgtgcttgaa tcatctcttt gtctcgatca ttaagcttat acttttgtgc tgtgtctact
    45241 gaaggaaaat cttcaaattc tgcaaattgt aatttaccta ataaccaaac atctaaggca
    45301 tgttgtaatg ctgctacttc cgcttcgtta tcagctacaa tgacaaatac agatgccatc
    45361 acctttgcgt ccattttaat cgttgatgct tggaaatgtt ttttgtaaat atcaatgtta
    45421 tccttcgctg catgtatcgc atttatatct ggtagcaaaa atgttccaac agaaagccct
    45481 atacctagtt cggcagctat tttggcagat gttgcgctac tacttaataa ccacatttct
    45541 ggaaaatgat caatgtgtgg ttggacacct aacgtatgcg cacttggttt atcctttatt
    45601 gtaagataat cacgtaataa cgaaatcgat tcatcgtaac tatcatatgt aggatttatt
    45661 ccatctaaag cttgctttac catagtagta cctggattat taccaatacc taaatcaata
    45721 cgatttggat ataacgctgc catcattcta aaatgctcag caattttata aggtcgatag
    45781 tgcggcagca tcacaccacc agagccaact cgtatgtgat ttgtctgcgc caatgtatgc
    45841 atcatcaaaa gttctggact actacacgca aacgctggta cattatgatg ttccgtaaac
    45901 caaattcgct taaagccaag tcgatctgct aattttgcaa gtgtcactga atcttgcaat
    45961 gccttttgtg catccttacc ttcatctatt aaggcatagt ctaatacgct taatttaacc
    46021 aatccgtcat ctccaaactt atcctgtcat gtcaaaccga cataacattt tagcgttctt
    46081 aataccattc cctcttcata tacccacgta tatgataacg tttttcaatt aacttttata
    46141 tcttttcgcc tttatttttc tttttcatat tcatattttc agacctacaa atgccattca
    46201 ttagtttaat tttaaaaata ctttccatgt accaattcta ttctatcaag actgttcatc
    46261 attgattatt cattctttcc atggtacttt gaaaacaata ttgaatagaa aaggaatcat
    46321 agtatgtacc gatacaaacc acttttacaa tcaatccact tacctaatgg catcaaaatt
    46381 tcgaatcgct ttgtattatc accaatgacc gtaaacacat caacaaaaga aggctatatt
    46441 acaaaagaag acttggctta tgctgcacgt cgctctaatt cagctggaat gcaagtcacc
    46501 ggcgctgctt acattgaacc ttatggtcaa ttgtttgaat atggctttaa tattgatcat
    46561 gatgcttgta tccctggatt aactaacatg gcatctacga tgaaacaaca tggtagcctc
    46621 gctattatcc agctagcgca tgctggtcgt ttttcaaatc aagccatttt aaattttgga
    46681 aaggtgtatg gaccaagccc tatgacattg cattcaccga ttgaacacga tgttatcgcc
    46741 atgtctcatg agaaaatcaa tagcatcatt cagcagtatc gcgatgctac attacgcgcg
    46801 attaaagcag gttttgatgg tgtggaaatt tcgattgcac aacgtttgct gattcaaaca
    46861 tttttctcaa ctttttcgaa taaacgtaca gaccattacg gtgccgactc attaaaaaat
    46921 cgtgcaagat tatgtttaga agttatgcgt gcggtacaag aagtgattga taaagaagca
    46981 cctgacaatt ttattttagg atttcgagca acgccagaag aaaccagagg cagtgattta
    47041 ggatatacca ttgacgagtt caaccaatta atcaattggg tcatggacgt ttcaaacatc
    47101 caatacttag caatcgctag ctggggtcga catatttatc aaaatacgtc tcgtacacca
    47161 ggtgatcatt tcggtcgacc agttaaccaa attgtctatg aacatttagc aggtcgtatc
    47221 cctttaattg caagtggcgg gattaattct ccagagtctg ctttagatgc tttacaacat
    47281 gcagatatgg tcggcatgtc ttcgcctttt gtcacagaac ctgactttgt gcataaactt
    47341 gctgaacagc gaccacatga tatcaatctt gaattttcta tggcagattt agaagattta
    47401 gccattccac atgctgcttt taaagatatt gttaaaatga tggattatgg ggaaggtcta
    47461 aagaagcata cccgtgacgc tttacgtcaa ttggaacaga attatcatga ctcatcgtct
    47521 taagactatt tttcatggaa atttaagaca gtgttataat gacatcaata tcaaaaataa
    47581 ggagcctatt aaatcgtgac tgaaattaaa gataaagtaa ttactaaaga tgcatttgca
    47641 ttaccttaca caattattaa agcaaaaaat caaccaacaa aaggcgctat tgtctacatc
    47701 cacggtggtg gattaatgtt cggtaaagct aacgatttat ccccacagta tatcgatatc
    47761 cttacggaac attacgattt aattcaacta agttatcgtt tattaccaga agtaagtctc
    47821 gattgcatta ttgaggatgt ctacgcatca ttcgatgcga ttcaatcaca atattctaat
    47881 tgccctattt ttacctttgg cagatcatca ggtgcatatt taagtctatt aattgcacga
    47941 gacagagata ttgatggtgt tattgatttt tatggttata gtcgcatcaa cactgaacct
    48001 tttaaaacaa ctaatagtta ttacgcaaaa atagctcaaa gcgtaaacga aacaatgatt
    48061 gcacaactca cttcaccaac accggttgtt caagatcaaa tcgcacaacg ttttttaatc
    48121 tacgtttatg cacgtggcac aggtaaatgg ataaatatga ttaacattgc tgattatact
    48181 aattcaaaat ataatattgc accagatgaa cttaaaacac ttccacctgt tttcattgcg
    48241 cattgtaatg gcgattatga tgttcccgtt gaggaaagcg aacatatcat gaatcatgtt
    48301 ccacattcaa catttgaacg cgtgaataaa aacgagcatg attttgatcg tagacctaat
    48361 gacgaagcaa tcactattta tcgtaaagtt gttgatttct taaacgctat aacaatgatg
    48421 taatatatca ttattttaaa aaactcaatt tatcatcatg ataaacagtt attcgatcaa
    48481 ccatattatt catacaattt attaagctca taaacagata cgcctgtccc tttagttttc
    48541 gctaatgaga caggcgcttt atttcacttt actattttta aattcaacac tgtgatgcta
    48601 cttatatctg atgtgccatg ataacagcac gatttacata gcatattaaa ttcagaagat
    48661 gaatttaact tgctttcaat tgtgttcctt tactttcagt cgcttcaaca cgcaacaagt
    48721 catttataat acctgtatag aagttggcaa gttctgcacc tttacgtttg aaatccagga
    48781 agtccacacc gataaaatcg acatgatccc atccttgtat gattggttta acttgccaga
    48841 tacctctgcg tgtggcaggt tcatcattcg taacattaac aaatggttga ttggacggat
    48901 gtaatgacga aatcactggt acgacaccat catttttacg ccattcttct cttgcatcat
    48961 gaccaataat tctactcgtt gtagccatta agaaaaatgt acctaaatca ggattttcat
    49021 aacctaatgg accagtatga gatgatacac ctgtataagt cgtatacgta atattaggat
    49081 tcatacttgt catgttgttc aattttgcag agccatctaa cgttaaatca taggcagcat
    49141 tgtcgtctga tgtccaaatt ttgcttttac taacgcgttt tatatagtca atgtaactct
    49201 catttggtaa ttgtttaaag ccccattgcg ttaatcctaa atcgatattc gaatacttgt
    49261 tacccataaa tcgatttaaa gcgaacatga tttttctaac agcttctgta tttccaaact
    49321 tatcagctgc ttgtgaacca ttatgtggtg ttgctaatgt tgtgattgat gcaaccatat
    49381 tgttatgacc accagtgaat aatggtgata tttctccacc atgcgcttta tgataggcaa
    49441 tttcttcttt gttaccattt cttaaaaact cttccattaa acgaattgtt tgaccaccca
    49501 tactatgccc tacaagatgt acctttttac caggttccca attaggcatg attcctttat
    49561 aagtcttacc atagcgctca tgtccgtatt tagctgcatg tgctgcgcca taatctacgc
    49621 gaccaccttt aatgtaataa taaagttcta cagcgcgatc atagttacta ccaaatgcac
    49681 ttacacttgc ttgatgtaca ttatagcctt gctttctcaa ttcttcgata actttaaatt
    49741 tatttccacc ccaataattt ggatataaag caggtgcatt atcgcctact aatcctaaaa
    49801 atccatgtac aaaaacaact ggatatttgt taagtggttg tacttgattc gctttaagtg
    49861 gtcgaacctt tttagcatct gctgctgcat ttgtagtcga acgtgtttta ggcgcttgaa
    49921 gcgcatcttt gattagttgt ttattatcag tatttttatc tgtcggtttc tctggggaat
    49981 tttgaccatc gatatgttta cttaaatcgc caacttgtgg tttctgttca ctttggcgaa
    50041 cagtatcatc ttgctttgca tctatgattt gatgcgcagg ttgatgtgta tcttgttgat
    50101 ttggatgttt gtccgtggtt gcatcttgtg cttttgttga tttaggtgca gttttatcat
    50161 tagacggggg tgtagttgaa gttggtgctg ctttatcatg attgggtatt accttttgtg
    50221 ccggaatgga tggttgtgat ttatcaacat cattcgattg tgacgttgtc gattgtgatc
    50281 cattacgttc agcatgatgg gtattttgaa cctgatcatt ttgacgttca gtattattag
    50341 tcgcattatt ttggtgtgac tgtttagaac cttgtcgttc agaatcttgc tttacttgat
    50401 tatcattttg cgttctgatt gttttactat tttgtgttga ttgatgcttc gatgattgaa
    50461 gcgtatcttt accttctgtc actgttccac ttttaccatc ctctttatgc atatcgtcta
    50521 attgctttcc tgactgcatt tgatgtgacg ttatcgcatt cccttgttct cccggttgat
    50581 ttagtgtttc tttttgtgcc gctgcattag ttgatgtttt ttccgaggct tgtgcttcat
    50641 gtgatgacac aacaaacatt gtagccgcta acactgacac cacgcctatt gaatactttc
    50701 taatactata ctttctttct tcttgtcctc ttaacatata atcacctcaa aagtattttt
    50761 ttgaccccct cttgagaatg aaaaacaact gcaccttcaa tataacatga catatattat
    50821 tttttgatta agactacaaa attaataaaa atttaataat acgatattaa atcgatacta
    50881 atcatttaca aatatgtgta tttccaaata atttataaac acttttagtt gtggtgttga
    50941 atcaacacaa caacatttaa gataaatatt ttattaagta atatagtttc aatctatata
    51001 taattagtta atttgtattg gtatgaaaat aattcaaact atacaattat agtaagtttt
    51061 cagatttttc taaattaaaa taatgattca tctcattaag gggaagatgc atcatacagt
    51121 tttgtgtatt catttaaaca aaggggttgc tttaatgaat caatatcatt ctaatgcaca
    51181 acaaccaagt gcatggcgtt tttttgtcta tagtttagtg ggcatactat gtttctttat
    51241 tccttttacg attaatggta acaacactat tttcgtcgat catgttcatc tagccattcg
    51301 ctcaatcata ggtccactta tgccctatgt tgcactgatt atgattttaa ttggtacagc
    51361 gttaccaata gtgagacgta cttttatgac ttcaatcaca aacttggtca ttacattatt
    51421 taaagttgca ggtgcaatga tcggtataat gtatgtattt aaaatcggtc catcaatact
    51481 atttaaagct aactatggtc cgtttttgtt tgaaaaatta atgatgccat taagtatctt
    51541 aattccagta ggtgcaattg cgctttcttt attagtgggc tatggcttat tagaatttgt
    51601 cggtgtttat atggagccta ttatgagacc tatttttaaa acaccaggaa aatccgctgt
    51661 cgatgcagtg gcttcgtttg tcggcagtta ttccttagga ttattgatta ctaatcgtgt
    51721 ctataagcaa gggatgtaca acaaacgaga agccacgatt attgcgactg gcttttcaac
    51781 agtttcagca acttttatga ttatcgttgc taaaacttta ggattaatgc cgcattggaa
    51841 tttatacttt tggataactt tagtcatcac atttgtcgtg actgcaatta ctgcatggct
    51901 accgccaatc agcaatgaat caacagaata ttataacgga caagaaggag aacaagaagt
    51961 tgctattgaa ggaagcagac tgaaaactgc atatgcagag gcgatgaaac aaaatgcatt
    52021 aacaccatct ctcgtgaaga acgtttggga caatttgaaa gacggtttag aaatgactgt
    52081 tggtatttta ccttctatat tatcgattgg ttttttagga ctgattgtag cgaactatac
    52141 accattcatt gattggcttg gctatatctt ctatccattt atttatattt tcccaattgc
    52201 tgatcaggct ttactagcaa aagcgtcagc gatttctatt gtagagatgt ttctaccatc
    52261 tttgttagta actaaagctg caatgagtac taaatttgtc gtcggtgtag taagcgtatc
    52321 agccattatc tttttctcag cattagtgcc atgtatacta gcaactgaaa ttaaaatacc
    52381 tgtctggaaa ctcatcatca tttggttttt acgcgtggcg ttgtcgctat taatcaccat
    52441 ccccgtcgct ttacttattt ttggataaag ttgaaaataa aatcactatc ataaacaaac
    52501 aaaacgagat gaacccatta cattcattca gccacctaag ataattaggt gcctttaatt
    52561 aatgatggtc atctcgtttt tttatcgtta tcatttaatc ttccataatt tgaacaaaac
    52621 gtttcgtaat ttcttttggt cgtgttatcg caccaccaac gactgaacaa tgaacgccta
    52681 agtccatcac acgtttatac atatccggtg taatgacatt accttccgca ataacttttg
    52741 catcaacact ttgtagtaca tcttttaaaa attggaagtc attttgataa agtaattgtc
    52801 cttgcgtata actagtatag ccatgtaacg tcgtgccaat ataatcaaag ccaagtcgtg
    52861 cggcattttt agcttcttca acggtcgcga tatcagccat gatttcaacg ttcggtgcat
    52921 gtgttctaat atatgatact aattcgtcta acgtttcttt cggacgttgc tgtaacgttg
    52981 catccaatgc aatgacttca cattggcttt ctatcagttc atcaacttct tttgacgttg
    53041 cagtaatgaa aacatctgag tgatcatagt cacgtttcac aatgccaata actggtaaat
    53101 ctaccgtttc tttaattgct aaaatgtctt ccttagtatt tgcgcgaata ccaacagcac
    53161 caccttcata cgcagctaat gccattttcg acataataaa agatgaatgc aatggttcat
    53221 ctggtagtgc ctgacaagat actattaatc catgtggtaa cattattcct cactccataa
    53281 gtcgtttttt cacgtaaagt catttacaat atatcattaa gataattttt atcaatgctt
    53341 tttactatct tgaaaatatt tttcatatat aatagtaatc attaagatga aggggtgaca
    53401 caatgaaatt tgagaatcgt gttcaacgtt atcaacattt atttacaaaa actgataaac
    53461 gcatcgtcaa ttatataaga caaaatggtt atagcgatgc cttttcaacg attaactcct
    53521 tagcccatgc gattggtaca tcaccagcaa cgatgacacg ctttagtcat aagctggatt
    53581 atgagaattt ccaagattta aaatttaata ttcaacaaga aatgacagag acagttattg
    53641 aaaatagccc aattattcaa agaattcata aatatcatca acaaatcatt caacaaactg
    53701 gtgaatttat tgataacgac attatccaaa cctttatcga caaacttcaa tcaagtcgac
    53761 atatactctt tgctggacta ggtagctctg gtttatcagc gactgaattt tattatcgta
    53821 tgattcgtat ggggctaaaa ggtaatgtta ctaccgattc acatttaatg aaaatatcgg
    53881 catccctact atctcattcg gatatgttta ttgctatgtc aaatagtggt aatacttcgg
    53941 aattaatttc tgcagcggaa gtcgccaaat ctcatggtgc atatgtcgtt gccatcacaa
    54001 attttgaagg tagtaaactt acagattgtg cagatttagt acttttaaca acggatcaat
    54061 cgcgtaatac cgaccatcaa tttatcaaca cacaaattgc gacactcttt ttaatcgata
    54121 tcgtgagtta tcatttatta gaaaatacga atctgagtca aacttatcaa catactaaat
    54181 ctattatcct agacaacaaa taactagtag tatattcaaa tccacctgca actgtagaca
    54241 atcatcgtga ttgtcccaac gagttgctag gtgctttttt aatttcaata ccaaatattt
    54301 ttttacattt tctaaaattt taatatctca gcttcttcaa tttaatttgc ccgtggcaca
    54361 ctgttggttg atatagttta gattggtcct agatagagtg tgatgtgtgg aactaacaac
    54421 agctctcatc tctcgtaacg gtttcaaatt ctattttaga atgactcctt ctttcaacta
    54481 tcattgcaaa cagccatata atgctgcatc atttttactc ttagtcgttt gtattggtgc
    54541 ataaacatag tcttttggta aatagtgtgc aactttcggc tcgatatatt taatgagatt
    54601 atctccttgt tcagatatac cgcccccaat taatataagc cctggatcat acatgacctg
    54661 tatttgggca atcccttctg ctacatcttc tgcccactca ttcaatattt gttttgcaat
    54721 atcatcacct tcttcagctg cttcaaacaa tactggcaca tgtgtgcttc tcgtaaatcc
    54781 tccggcaatc atgcgctttt tcaatgcact cgttgcagca cgttgctcaa acgttgtatt
    54841 ttcagttgga cgatacaata aatacccaac ttcatttgcc ttatgaagct caccattatc
    54901 aatatgacct tgattattct tgtacgcacc cccaatgcct gtaccaagcg tcatacaaaa
    54961 gatccgttct gcttgatatt gatgtaattt caattcgcct agtaatgcag cgtttacatc
    55021 attttttact ttgacataag gagacagtga ttttaataat cgcttaaaat tagtaccttt
    55081 ataattcgga atggttggcc ctgcgtatac aatttcgcct ttttgttcat caacaacgcc
    55141 tgctgatgaa atacctatga caggttggat caactgatat tgcttcatat atcctgttac
    55201 aatctcatat actttgtcag taataagctc acttttgttg tccggcgttg atatttgttg
    55261 atagtcaaac atattcaatt gcttatcaat aactgccgat ttaatttgag tgcctccaat
    55321 atcgattgcg atgtaataca ccttactcac tccatttcta ttgattttga aaaacatttt
    55381 cattaattat acataaatat gactacaatt ttcaaaaaga tattgttaca ttttatgata
    55441 gcgtttacaa ttatagctgt aaactatatt atcaaatgat ttttggaggg acttcataat
    55501 gaacaaagat ttaaaaggtt tatatgcagc gttactcgtt ccttttgatg aaaatggtca
    55561 agtaaatgaa caaggactta aacaaattgc tcaaaatgcc attgaaactg aagaattaga
    55621 cggtctttat gtaaatggta gctcaggcga aaacttttta ttaaatacag agcagaagaa
    55681 gcaagttttc aaggttgcca aagaggcagt tggggataaa gtgaaattga ttgctcaagt
    55741 aggttcgtta gatttaaatg aagccattga acttggaaaa tatgccacag aactcggtta
    55801 tgatgcactt tctgccgtaa caccattcta ctatccattt acttttgaag aaattagaga
    55861 ttactatttc gatattatcg aagcaactca gaacaatatg attatttatg caataccaga
    55921 tttaacaggt gtgaatattt ctattgaaca attcagcgag ctatttaatc atgaaaaaat
    55981 tgttggtgtt aaatatacag cgccaaactt cttcctactc gaacgtatta gaaaagcatt
    56041 cccagacaaa ttaatcttat ctggctttga tgaaatgtta gttcaagcta cgatttctgg
    56101 cgtagatggt gcaattggtt ctacatataa cgttaatggt cgccgtgcaa gaaaaatctt
    56161 cgacttagca cgacaaggtc aaattcaaga agcttaccaa ctgcaacatg attcaaacga
    56221 cattatcgaa acagtgttat caatggggat ttatccaaca ttgaaagaaa tattacgtca
    56281 tcgtggcatt gatgcaggat taccgaaaag acctttcaaa ccttttaacg aagcacatcg
    56341 acaaacatta gatcaactca ttgcaaaata cgatttatag acatcaaaga atcaatacat
    56401 tgtaaagggg atgttgccca tgaaagaagt tggatttggc acactaaact gggttgccgt
    56461 tatcatttat ctactagcta tgttgttcat tggcgtttat tttaccaagc gcgcgagcca
    56521 aagtaccaat agtttcttta ccgcaagtgg tcgcttgcca tcttgggtag ttggcttttc
    56581 aatttatgct actacgttaa gtgcgattac atttatgtcg acaccagaga aagcattttt
    56641 aacagattgg tcatatatcg ctggtaacat tgctatcgtc gcaattattc cattacttat
    56701 ttatttctat gtccctttct ttaaaaagtt aaaggtaaca tctgcatatg aatatttaga
    56761 agctagattt ggccctagca tacgtgtcat tggctcatta ttatttgtcg tttaccattt
    56821 agggcgtgtt gcaattgtta tctacttacc aacattagca atcacatctg tatcagacat
    56881 gaacccttat atcgttgcat cactcgttgg tttactatgt attttatata catttttagg
    56941 tggtttcgaa ggtgtggttt ggagtgattt cattcaaggc gtcattttat taggcggcgc
    57001 tttagttatt attattctag gtgttgtgaa cattaaaggc ggtttcggca ctgtctttgc
    57061 agatgcgatt gagcacaaaa aattaattag tgcagacaat tggaaactaa atactgcggc
    57121 agctgccatt ccaattattt tcctaggaaa tattttcaac aacttgtatc aatacacagc
    57181 gagtcaagac gtcgtgcagc gttatcaagc ttctgatagt ttaaaagaaa caaataaatc
    57241 gttatggaca aatggtatcc tagctttaat ttcagcaccc ttattttatg gtatgggtac
    57301 aatgctgtat tcattttata cacatgaagc tgttttacca aaaggcttca atacatcatc
    57361 tgtagtgcca tatttcattt tgactgagat gccaccattt gtagcaggat tacttattgc
    57421 agccattttc gccgctgcac agtctaccat ttcatctagt ttaaattcta tatctgcttg
    57481 tatttcaatc gacattaagc aacgcttctt cggaaaaggt agcgagcgac acgaagttaa
    57541 ctttgcacgt ttcattatta tcattgcagg tattttcggt tttggaatgt cactatactt
    57601 aattgcttct aattcaaatg acttatggga tttattcttg tttgtgactg gattattcgg
    57661 cgttccattg gctggtgtat ttgcagttgg tattttcact aaacgtacga atacattcgg
    57721 tgttatttgt ggattaatat tgggtatcat ctttgcttat gtctataatg gtgttggcaa
    57781 aggtaactca cctttctatg tatctaccat ttcatttaca gttgcttttg tctttgctta
    57841 tatacttagc ttcattgtcc cttcaaaaca taaaaaagat ataacgggat taacaatttt
    57901 tgaaaaagat aaaccatcaa catacatttc aaaaacggct acgaaaaagt agattgttat
    57961 gataaaaccc cgtcactaag ttatgatgcg ctgttgcgcc aacttggtga cggggtttag
    58021 ctttgccatg aatttaattt aggtacttcg attcatttac aatactaagc caatgattga
    58081 tcctgaaatg attgaagcta gagttgaacc aagtagcaac ctcattgcaa aggatacaac
    58141 tttttctcct tgtttatcac taatgccttt aattgaacct acgatgatac caaccgtacc
    58201 aaaattagcg aagcttacta agtaaactga aatgatacct tgtgttcgag ctgatacatc
    58261 acccaggaca tttttaaaat caagcattgc tacaaactca tttgtaatta atttagtcgc
    58321 cattaaagag ccagctggaa cagcttcgct ccatggaatc cccattaaga atgcgattgg
    58381 tgcaaacaca tagccaataa gctgtttaaa gttcaaacca acactaccaa acatgatatt
    58441 aattgcttcc attaatgaaa taaatgctaa caacattacg gctactacaa cagcgatttt
    58501 aaacccatcc atcgcactat caccaatcat ttggaaaaag gcaactttct taggttttcc
    58561 tgtttttcca ttcaatgttt tagtttctgt ggatttcgtt aagttatcaa tttcaacatc
    58621 agtatcatca gatttatagg gattgattac actggcgatg ataagcgcac taaaaatatt
    58681 taacattact gctgtaacta cgaacttggg ttcaatcatc tgcatatatg aacctagcat
    58741 tgccatacta acagcactca taccagacgt cgcaattgta tataatttcg ctctagataa
    58801 tcttggaata atatctttta ttgttaaata tacttctggt tgcccaaaca ttgctgttga
    58861 aatagcaaaa taactttcta agcgccccat tctagttatt ttattaatag cgatacctac
    58921 atatttgata ataaatggta ataccttaat ataattaaag atgcctatta atacagaaat
    58981 aaaaactaat ggcagtaata cgtttaaaaa gaacgtaaag ccatttttat tttgtatatc
    59041 tccaaaaaca aaatttatgc ctgctttact aatatttatt agcccttcaa aaaatgaacc
    59101 tagtgcagtt aaaattgtca aaccaatcgt tgtgttcatc ataaataaca cgatcaacac
    59161 ttgaataaat atcattatta acgtcttttt gaagtctatt tttttacgat caaaactgaa
    59221 taaaaacgca acaaatagtg caaatgctat ccctgtgata gcgaataaaa tattcatgta
    59281 tcatcaccta caataattta ttaacagcga cagcaatttt agcacccaac gccgcattgt
    59341 tttcaacaag ttttatattt gctgctaaac ttttaccatt cgttttttct acaattttcc
    59401 ctaacaagaa cggtgtggcg tccttacctt taataccttg attttccgct tcaacaacag
    59461 cttcatttat gattgcctca atatatgctt ttgataaggc atgctcatat ggaattggat
    59521 tagcaacaac aatgccacct tcaagattta actgctgttt tgttaaatga atgtcagcaa
    59581 gtcgttctgg cgtttcaacc gaacttgtta acttaacacc gctttcgcga gtgaagaatg
    59641 ctggcaattc attcgtttga tatccaataa ctggaacgcc ttttgtttct aaatactcca
    59701 tcgtcttagg taagtctaaa attgatttgg cacctgcaca gataacagtg acatttgttt
    59761 tagacagttc ttctaagtct gctgaaatgt ccatcgtatg ttctgcacct ttatggacgc
    59821 ccccaatacc tcctgtaaca aaaaattgaa taccagccat tgcagcacat atcatcgtcg
    59881 tcgctacagt agtagcacca acacacttca tcgcaataac ttctgctaaa tcccttctag
    59941 atactttagc aacgtcttta ctagttgcca gtatttctaa atcttcgctt tctaaaccaa
    60001 ttttaatttt gccatctata atggctatgg ttgctggaat ggcaccatta ttcctgataa
    60061 tttgctctac tgttgttgcc atttcaacat tttgtgggta cggcatacca tgcgaaataa
    60121 ttgttgattc taatgctaca atcggttgat tgttctcccg tgcttgctga acttctcgag
    60181 aatactcaat atacttttgt aaatttgcca tttttataat cctccatatc gtgataaagt
    60241 tgctgttgat ctaggttttg cctaactgta tatttcgttt ctatcgtttt ctttgcgtta
    60301 accataccag caattaatat atcttcagta gacatcccat ttaaccagct atacactact
    60361 gcagcacaga atgaatcgcc tgcacctgta acatctttca cactatttga tggcataact
    60421 gacttaatga tttcttcctc accacttcga taaatgagtt ctttcacgcc atttgtcaca
    60481 ataacatttt taacacctaa atcattccag cgtttagcag ctatttttaa atcatcagta
    60541 gattctattt ttaaatttaa gtatgtttct gtttcatctt tattcgtgat aatccaatca
    60601 atagcatgta atgaatcagg catatttttc atttttgggg aagaaaccgt ggtgataact
    60661 aatttgattt gatgtttcgt ggtataggca cataagaagt ttaatgcctc tttgcctaaa
    60721 ttcaaatcta caataatgca cttagccttt ttcaataagt gtgaacgctt aattaaaaat
    60781 tcaggcgtaa tgtagtcaaa cacttccata tctgctaagc catatgtcat gtcgccttct
    60841 ttactaatta aagctgtata tgaacctgta ctcgcatttt caaattgttg aacatgatcc
    60901 aaattcataa atggtgtgga caatcgttta atcatttccc attcactatc ttgtccacta
    60961 gcagataaaa aagcgaccgt ttcgccaagc ctacctaagt tctcagcaat atttcttgct
    61021 acgccaccaa tagagcgtgt tgacgttaca ggatttgatg tttctgcaac taaattttta
    61081 tgcacataaa acttacgatc tacattcgct gcgccaatac aaacaatagg ataatcttca
    61141 tttaaaacat atgcctttcc cataacatat tccttttgta ttaatcctga aataatgttt
    61201 gctacgctgg gtctagataa tccaattgcc tcagcaagtt cacgttgtga aataaacgga
    61261 ttatctttaa ttctttttaa aatttctttc tcagaatcgc tcataacatc cctcctcata
    61321 ttgacttaaa atacttgaat cagtgaattt acaaaaatat cgtagcatgc tgttatttct
    61381 tttgtaaacg cttacattta ccgttatatc aatgatattt gtttataaaa tacgcataat
    61441 ttcgtaaaaa gtaagttcat tccatcgtgt aaaaggtact tgagaaaatg ataaatgttt
    61501 atacagtatg atatttgtcg acaataaatt atgacatttt tatgtcttgt atttttctat
    61561 aaaaaaacgt gactcattat cgactgttac atcgactgaa tcacgttact atgttttatt
    61621 tgtttttact attcaatatg atgatgctat gcgtctactg cacctcgatt aatcatgtct
    61681 tgcttagtaa caattggata ttttttaaat acaattgaac caagataacc tgcaagcgca
    61741 cctacaatcg ccattactac accataaatc acaattgtcg tcggatgatt aaatccaaac
    61801 ataactaaaa atcctgcaat cggtgtagct gtacctgtcg catcgttaat taaacctgac
    61861 atagcaataa ttaaaccagc aatcgcacca ccaaagaaat ttgtaatata gattggaatt
    61921 ggattggctg atacaatatc tgcttgtgat aaaggttcaa tacttactgc aatcgtagac
    61981 ttacgatcac ctaattttaa gcgatggaat agcgtcccat tcataaatgc cgaactaaat
    62041 gctgccatgg caccaatagc cataggtaca cccgttaaac ctaataatgc tgtcaatgcc
    62101 attgaactca atggcgctgt gccgacaacc gtaataatac cacctaaaat gatacccatg
    62161 ataattggat tcgtattcgt actactttgg ataatatcac caattcgaat caatgtacta
    62221 ttcactactg gcgttaataa tactgcaata agacgagcta atggcgctaa gatgacaatc
    62281 gatccaatta agtcgacacc atccggcaca tatttctctg tatatttcat cacatatcca
    62341 atcatataac ccgcaaagaa acctggtaat aaatccatac caccgcacgc ggctgctata
    62401 actaatgcat atactggtga cacaccgata gctaatgctg ttaatccagc ggcagcgaca
    62461 ccacctagac ctcccgcagc gtctcctagc tcttctaaaa atttaatacc gaatacttcg
    62521 ccaccaacat atttattaaa tgcttccact aaaaatgttg cgattgctgc attagctaat
    62581 gctcccatgg cacgcatacc attaggcgct ttatatgtaa ataatgtaaa aatcactaag
    62641 accaaaaata aaaataaagt acctatcaat aaatccataa ccattgaccc ccattacgat
    62701 aattttatat tcaatcccca tatttaaata ttgaatactt agaggccatt ttactacaaa
    62761 aaatattata tttcacggaa tatttctgat tttcgataat aattattatt aattgaatgt
    62821 gaaagtttat tcaaataata cataaacata aaaataccgg cacatgatgt accggcttaa
    62881 taaaactatt ctactgtttc attttcaaga ttaaggacgc catctttcat atgatatgaa
    62941 cgatcacaat atgctttaag tcgttcatca tgtgtaacaa taatacatgc tttctttctt
    63001 tgtttggctt gatcacgtag aattttaatg acttcaatcg cattttcagt atctaacgcc
    63061 gcggtaggtt catccgctaa aataatcgac ggattcgtat ataacgcttt ggctatcgcc
    63121 acacgttgtt tctgaccacc tgaaatttct gaaggtaact tattaagcaa tgaagttaga
    63181 cctaattgtg acataagttg ctgatagtct tcattagaca taacattctt atttttcttt
    63241 ttcaataatg taaattgttg ctttaccgtt aaaaatggta caaggtttgt agcttgtaaa
    63301 ataaaaccta tttcagacat tctaactttt gccaatgctt tttgcttcat tgtcgtaata
    63361 tcttggttat tgattaaaat gtgcccagat gtcggtgttt gtaaagcacc tgccatagtt
    63421 agaaatgtac ttttaccaga gccagaaggt ccaaccaatg ctataatatc acctttattt
    63481 atctcaaaat ttgtatcttt aaccgcttca atgttacgat tcccatcttt aaatgacttt
    63541 gttacatttt caaatttcaa catttgctac acctcctacc caatcgcctt taacggatct
    63601 atttttctaa ttgttaaaat ggagaataaa cttcctaata cagagacaat cattaacaca
    63661 attgcaaata cgagcaatgt tagtacatcg aatttgacag gtactgcatc aggtaaaaat
    63721 gcacctgtaa cgcctgttaa cagtaagcca aatgccgtac caaatagtgc taatatgacc
    63781 gtctgcgaaa ttaccacatt cgccaaatag ccattcgtaa atccttgagc ttttaatatg
    63841 ccaaataaac tcgtcttttg taatgtcatg acatatagga aaatgcctat aactgtagct
    63901 gaaatgacaa ataagaatga aatcataaag tttaatgtta agttctgtgg tttataacct
    63961 ggtaaatttt caataaagtc attaatactt accgcttcaa gctcttggtt taattttttg
    64021 tctttccaat ttgtatcacg tacaacaact gcattaattt tatctccagt caatctagga
    64081 ttgatcttgg caatggtagc gtcattcgtg aaaatgactg atgacgcatt atattttgca
    64141 ctttctgtaa aacctacgat atgcaatttt tcatctgatt gagatagtga taatgtgtca
    64201 ccaattttaa atcctttatt tttaagcgtt tcatcagcta acacttcatt atctttagtc
    64261 gctttatgcc cttctattaa actcggaact aaaaatgatg acttttcaac accgaacact
    64321 aaaacattgt ctttttgatg gccattagac acaatttccc ctgtttgctt caaagtagct
    64381 tgcttcttgt atttattttc aatatctttc ttgttaaaaa cagattgttg cacagtttga
    64441 ttggcatctt tatttagaac aatggcatct gcttgccact tatcaatgcc ttctttattc
    64501 atattgataa gaccattcgc caatccagat aataaaaata gcaagtaact aatcatcgtt
    64561 aacacaccaa taattagtcc aaacttcaat ttgttgcgcc gtatttcatt ccaagctaaa
    64621 aacatgcatt tctctcccta ctactatgat ttaaacattg tttatattct tagatgcacg
    64681 tacgtcgtgt tgcgctctgt aatgttatac atacacttat ccttcattat acccgaactt
    64741 tttatattaa aagcaaattt atggaaaatg caattaattg tctattattt ttgtacggta
    64801 catttaaaat taaggatcaa tttaaaaacg cctacatata cctttaagta catgtagacg
    64861 tccaattcat atattattta acttcgcctg ttttaggatc gaattgctta atagcatttt
    64921 tacgtaattt atcttttgct ttgtcacttg ctttatagtt attgttgtaa atcgtagctt
    64981 cccaactacc atacattggg ttagggaaaa tgatatattt cttaccgaaa tcgtctttat
    65041 gtttttcaat taatgcttca cgagattcag ctgtagcttc ttttggatct gtaaagtcta
    65101 ataaattatc tccaaatagc atgacaagtt tatgatcctt ttgaaccatt tgtctgcgtg
    65161 attctttact cttatcatct ttacctttta gtaaaatatg actcttctta gcttgaggga
    65221 taccttgttg ttttaagttc ttttgtgttg cctttaaatc tttttcttta tctctatcag
    65281 aaatatagta gatatcgaca ccttttttgt cagcatattt caagaattct tttgcgccat
    65341 agacaggttt agctttagca gcttgtaccc attcatgcca accttctggg aaaggtttat
    65401 tatgtattga tgcatagcct tgatatggag aattatctaa aactgtttca tctaaatcca
    65461 aagcaatagc taacttatgt ttacctttat tctttttaat ctctttatct aactgtgtct
    65521 ttgcactgtt ataaccttgt aaatataatg cttttgcttc agctgaattt tgataccaag
    65581 ccactgccat aatattttga ttaccaagat tcgccttttg tgatgctggt atagaagctt
    65641 gttgcgtttg ttgaacttca gcagaacttt tggcaaacgc tgtagaattt gtcgtttgtg
    65701 gtgctgaaac tgtaaccgct accgataatg atgctattgc aatatacttt gaaattttat
    65761 tcatcttatc acctcatgat taatatttaa aatacagtta aaattataaa tgcatttatt
    65821 taatattgct atactatgaa aagatattta atattatttc ttgaaaagct aacaaatatg
    65881 tgaacatttc atataagcat gatttaatgg gagacctatc acatgagaga gatttgtgat
    65941 ttatcacgta ataaacttaa attcatttga gtgactaggc cttcctatca gacatattca
    66001 ctcatccacg tatcattatg tgtacagtgt gctatctctt atttacctat tggaacaacc
    66061 ataaactcat ccatagttta ccttttataa atagcagtcc tcactcatac aatttctcat
    66121 aaaaatcaca acgctccaac gtatttccaa cttactttca cctattttaa ttcataaaaa
    66181 cgacacttta attgtcatta tccaataata gcaagacgtt attattgcaa tcttttttat
    66241 aaaataatag aatcatagta ttgtcattta aagataaagt aagaacgttt ttatttttca
    66301 gattttttaa attattatga atatctagtt ttaggaagga aattacattg aaaaaacaag
    66361 ttattatttc gggcctcatg ttattttcac tattttttgg agccggaaat ttaatattcc
    66421 cgcccatgct tggccataca gcgggtcaaa atatgtggat tggtatgcta ggctttgccc
    66481 ttacaggcat attactcccc tttattactg ttattgttgt tgcattttat gatgaaggtg
    66541 ttgaaagtgt aggcaatcgt atacatccat ggttcgggtt tatttttgct gtcgtgattt
    66601 acatgtctat cggagcattt tacggtattc cacgtgctgc aaatgtcgcg tacgaaattg
    66661 gtacaagaca cattttacct gtgcataacc aatggacttt aattatattc gcagcaatct
    66721 tttttgccat cgtttactgg attagtttaa atccatcgaa aatcgttgat aatttaggta
    66781 aattattaac accgttatta ctattaatgg tcgctctatt aagtattgct gtcattttca
    66841 accctgaatc tgcactaagt gcacctaagg ataaatatat aacacatcct ttcatttcag
    66901 gaagtttgga aggctatttt acaatggatc ttgttgctgc gttagctttt tccgtagtca
    66961 ttgtcaatgg ctataagttt aaaggcctca cagatcgcat gaaaatttta aaatatgtct
    67021 gcttttcagg tcttattgca gccatattac ttggagtgat ttactttgca cttgcatacg
    67081 ttggggcatc aacagctcca ggaaacttta aagatggtac agatatattg acgtacaact
    67141 cattacgatt atttggttcg ttcggtaacc tcgtatttgg aatgacggtt atccttgcat
    67201 gcctaacaac atgtatagga ctcgtcaatg cttgcgccac atttactaag aaacacgtac
    67261 ctaagttttc ttataaaata ttcgcactta ttttctctat catagggttc ttatttacaa
    67321 cacttggttt agaaatgatt ttaaaaattg ctgtcccatt attgacttta atatatcccg
    67381 tgtcgattgc acttgtactc atatcatttg ctaacatgtt tagcacattc agattcagtt
    67441 gggcctatcg actcgcaact gttattacat tgattatttc aattttacaa atactaaata
    67501 gtttcaactt attacacggt gttattttga aatcgtttat gatgttacct ttagcagata
    67561 tcgatttagc ttggcttgta ccattcatgc tctttgctat tatcggtttc ataatcgatg
    67621 tatttatacg ccgtccgaaa caagcgacaa cttaataaat gctcactgcc tagtaatgat
    67681 tgacccatcg ttactaggct tttttatatg aaattcatga cttttcagtg ataccgtctg
    67741 tctattgatt attttaaaat aaatgatttg ttaaaaaatc ctagctgtta ttcaaaaata
    67801 ttagttttta aaattaattt tgtgaaatta ttcacaaata aggcaattca tagtatactc
    67861 tgattaacaa atgaaaagtg aggatgtcat tgtgaaggag aaacatatta aatgggataa
    67921 gattttttat ggggacgact gggtaaataa cgtagtcgaa acgataagaa caaaagatat
    67981 attacaaagc gtttatttaa aacgttattt attacgcgcg atgatggcag gatttattat
    68041 cgggattatt acggtcttcg tattatcagt taaagcaaca cacgaaccag atttaccgcc
    68101 aggcattgtg aatatggcca gtgccattac attcagcttt gcgttagtac tcattttatt
    68161 tacaaactcc gaactactaa ccagtaactt catgtacttt actgtaggcc tgtattataa
    68221 agtaattaaa ccaactagag tattgaaaat atttttatta tgctttgcag gaaatatttt
    68281 aggtgctgct attttattta gtttcatgcg tttttcaaat gtaatgacgc cagatatgtt
    68341 aaatcagtta tcagcagtta tagagcataa aacgttgtct actggttttg taagtatatt
    68401 aatgaaagcg atcttcgcca atttctttat caatatttca ttagttattg ccatgcaaat
    68461 tgacgatgta ctcgcaaaaa tgtttgtcat gatgttcggt gttaccatat tcgcctttat
    68521 gggttatgaa cacgtcgttt acaacagttg cttatttatg ggtggtttaa tttatcaagt
    68581 tgatacatta cacttcatac cagctatttc gaatatcgct gcggctttta tcggtaacta
    68641 tattggaggc ggactcatta taggtttatt ctatgcttac ttgaatgatc atcatcaatt
    68701 ttataaaaat aattaactat atttgaacaa tgcgttagtc gatgccttta atatttagaa
    68761 gtgcattgtc taacgtattt ttttaaagtt cgtcaatgat ttttatccga tgctatgagc
    68821 attatcaaat acaaaatgct ctcttaaaag cagttattga ctgaaaatct acttctaaga
    68881 gagcacttta tttaattact taagaaatct tgaaatttca atatacgatg tttatgataa
    68941 gtcgcttatt tcatctttag gcttgttatt agtaagtagt ttaataccac tgattaacca
    69001 taaagcaaat gtaattatgt taccacttat tacagctcca ataatcaaca atataccact
    69061 catttttttg tttttagatg ctttaaacat accgattgca cctaaaataa ttgaaatgat
    69121 tccaaatatg aatagggata agaataatac agtgaaaatt gctgctgctg tttctgcatc
    69181 aactgggtca acctcaccat taactgttgt tgacacatct gtagtcatta cacctgatgc
    69241 tgctaaaacc atcaatagta aactaaatac cgttgctaaa ccctgaacaa caattcctat
    69301 tattgtcatt attttgatcg atttttccat tgtcttactc ctttattatt attatttaca
    69361 aacttgcgtt tgtgttctta tatataaatg tttaaattta tatcgtgttt attttaaaaa
    69421 ttattgtcgc taaagctcat ttactttttg aaactggtta aaagttttaa agaaagccta
    69481 tgttaatctt tttccacttc tacattttca tcttcataat ctgctttatg gtctttcata
    69541 tacttaattg ggtctatttc tctattaatc tctgccttac catcttttat ttcatatgcg
    69601 aaataataca ttttttcacg atctttatat aattgaatac caataacaat gactttacca
    69661 tctttataaa catgtgtatt actgtcttct tgtttaatgt ctgttttaat agtgttttgt
    69721 actttcgagg caattttatt catttgattc tgttctttgt acactttatc aatatctttt
    69781 tgatactttt cacctttatt agaacaacct gccaatataa ttgctaacat taaaaatact
    69841 accaatattc ttttcatcat ttttctcctt agatggctgt cattttccac acactacaat
    69901 actgataata tgctttatca ttgtgatgtt tgaacaatgt tttgccaatt gttatcaact
    69961 taaaattcgt ttaaatgttt gacgcaagat tttgattaat tatgatatta aagtcttctt
    70021 aatataaaca tctatttcag tgttaattta caactatcta ctgaaaatta tgtcatcata
    70081 ataaattatg aaataactat ttgatacctt tacattgc
//
LOCUS       DALPQQ010000002        65731 bp    DNA     linear   BCT 22-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus strain K18-6-464
            SAMD00233528-rid16434743.denovo.002, whole genome shotgun sequence.
ACCESSION   DALPQQ010000002 DALPQQ010000000
VERSION     DALPQQ010000002.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMD00233528
            Sequence Read Archive: DRR236061
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 65731)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 65731)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001543423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001543423.1
            Genome Coverage       :: 77x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/22/2022 17:09:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,811
            CDSs (total)                      :: 2,743
            Genes (coding)                    :: 2,689
            CDSs (with protein)               :: 2,689
            Genes (RNA)                       :: 68
            rRNAs                             :: 2, 4, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 4, 2 (16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 54
            CDSs (without protein)            :: 54
            Pseudo Genes (ambiguous residues) :: 0 of 54
            Pseudo Genes (frameshifted)       :: 27 of 54
            Pseudo Genes (incomplete)         :: 27 of 54
            Pseudo Genes (internal stop)      :: 10 of 54
            Pseudo Genes (multiple problems)  :: 10 of 54
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..65731
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMD00233528-rid16434743.denovo.002"
                     /strain="K18-6-464"
                     /db_xref="taxon:1280"
                     /geo_loc_name="Japan: Niigata"
     gene            <1..687
                     /locus_tag="O7798_000068"
     CDS             <1..687
                     /locus_tag="O7798_000068"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498763.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RES family NAD+ phosphorylase"
                     /protein_id="HDC2862348.1"
                     /translation="WDGFCESLKYKNRFHNNMINLENLAFFLDITTNYYSIEEFRERF
                     EPLYRSRIVKFITEKSELMSPPKGFATAGRLNSKWISVLYLSTKEQVSIEEVKPKHND
                     IIYIGKVKLQKNVTKEKLKIANLTNLTSNAIKAGDDGFRKYFVNYQTLKKIHKGITNP
                     SDEQGIDYLPFQYLADYIRSLKYDGIMYESILQDGTFNFVFFDQSLFECVNYERKRVS
                     DVKYTLTKLS"
     gene            complement(952..2544)
                     /locus_tag="O7798_000069"
     CDS             complement(952..2544)
                     /locus_tag="O7798_000069"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498764.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HDC2862349.1"
                     /translation="MSNLLEVNSLNVQFNYDETTVQAVKNVSFELRKKHILGIVGESG
                     SGKSITAKSILGLLPDYPDHTLTGEIIFNGQSLNNLSTSALQQIRGKDISMIFQDPLS
                     SLNPRLTIGKQITEVIFQHKRVSKSEAKSMTIDILEKVGIKHATRQFDAYPHELSGGM
                     RQRVMIAMALILKPQILIADEPTTALDASTQNQLLQLMKSLYEYTETSIIFITHDLGA
                     VYQFCDDVIVMKDGSVVESGTVESIFKSPQHTYTKRLIDAIPDIHQTRPPRPLNNDIL
                     LKFDRVSVDYTSPSGSLYRAVNDINLAIRKGETLGIVGESGSGKSTLAKTVVGLKEVS
                     EGFIWYNELPLSLFKDDELKSLRQEIQMIFQDPFASINPRFKVIDVIKRPLIIHGKVK
                     DNDDIIKTVVSLLEKVGLDQTFLYRYPHELSGGQRQRVSIARALAVEPKVIVCDEAVS
                     ALDVSIQKDIIELLKQLQLDFGITYLFITHDMGVINEICDRVAVMKNGEIVELNNTED
                     IIKHPQSDYAKQLISEVAVIAK"
     gene            2501..3979
                     /locus_tag="O7798_000070"
     CDS             2501..3979
                     /locus_tag="O7798_000070"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498765.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HDC2862350.1"
                     /translation="MNCTFRLLTSNKFDMMLCLPIHKCVNLFYTFVYHSNLLKIILQG
                     VIIIITYLESFKSLYHKAFYKFVLSVLSLPIFLYAVIKFFFSAKRKNFYANNSEISEI
                     EQALHQKYKYLSQQKSSTQIHKEALKIFKAQSSNTSSKNIEQAHFSTYFENVLFHKFI
                     MIKVILALPMFILLTFYLQPLVRYIFERIVMAVIVIIGVIVSVFTILYFSPLDAAYSI
                     LGQNATKAQIHQFNVLHHLNEPYFIQLWDTIKGVFTFDLGTTYKGNEVVTKAVGERIP
                     ITIIVAVLALMVALIIAIPIGIISAMKRNSWLDITLMIIALIGLSIPSFWQGLLFILA
                     FSLKLDILPPSYMPEHPISLILPVLVIGTSIAASITRMTRSSVLEVMRSDYVLTAYAK
                     GLSTTQVVIKHILKNAIIPIVTLVGLLVAELLGGSAVTEQVFNINGIGRYIVQKQLIP
                     DIPAVMGGVVYISIVISLANLIIDIFYALIDPKLRSEINERK"
     gene            3985..5148
                     /locus_tag="O7798_000071"
     CDS             3985..5148
                     /locus_tag="O7798_000071"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498766.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HDC2862351.1"
                     /translation="MAQLNSKIASLKLFASYAIATYILVILTSALNLFKGYVADTFYI
                     AETLLIVLTIILIIILTTEQTWKHHDLWRRIVEVLLLLMTLTGNVFTLLMFVSIRRYQ
                     RTSQIHSYNGWESFIRKTTRHRIAIIGLLILVYMLTLSIVSQFTFDTTLATKNQFNAL
                     LHGPSLAYPFGTDDFGRDLFTRVVVGTKLTFSISIISVVIAVIFGVLLGTIAGYFNHI
                     DNLIMRILDVVFAIPSLLLAVAIIASFGASIPNLIIALSIGNIPSFARTMRASVLEIK
                     RMEYVDAARITGENTWNIIWRYILPNAIAPMIVRFSLNIGVVVLTTSSLSFLGLGVAP
                     DVAEWGNILRTGSNYLETHSNLAIVPGVCIMFVVLAFNFIGDAVRDALDPRIH"
     gene            5165..6940
                     /locus_tag="O7798_000072"
     CDS             5165..6940
                     /locus_tag="O7798_000072"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498767.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide ABC transporter substrate-binding
                     protein"
                     /protein_id="HDC2862352.1"
                     /translation="MKKIISIAIIVLALVLSGCGVPTKSEVAQKSSKVEVKGERPTIH
                     FLGQASYENDMNIVKDQLENAGFNVKMNIQPDYGSYRTQRQAGNYDIQIDDWMTVFGD
                     PNYAMTALFSSTGSNSLLKDKHVDQLLNKASTQNEADVKQTYKQIEDEVVFDKGYMAP
                     LYGSKKNLVYDNKVLDKNSVGLPNSRALIWQQFDYNNSRERDTRPLVMTQQDGEIPTL
                     DPIRSIAPSVYSINMNMYTRLLLLDENDHLTTKGSLSHDYAVNKDNKAFYFLLRDDDY
                     FAKVVNGQARNTGERVSAEDVKFSLDRARDKKSVPNNNTYNMHKHINDIKILKDEDID
                     QLRKEKDKDDKSIYDKLIKAYNVKSLTTDGQKVNNKDGIYQIVKITTDQSMPREVNYL
                     THSSAGILSKKFVNQVNQEYPKGYGDSSTIPANSDGKNALYASGAYIMTQKNAYQATF
                     QRNPGFNETEKGSYGPAKIKNITLKFNGDPNNALSELRNHSIDMLADVNQKHFDLIKS
                     DKNLSIIRKNGRKSVFLMLNIKKGIFKTHPNLRQAVVNAIDQDQFIKFYRGDKFKIAS
                     PITPLVDTGNEQRQDLEKVEKAINQ"
     gene            6978..8984
                     /gene="ggt"
                     /locus_tag="O7798_000073"
     CDS             6978..8984
                     /gene="ggt"
                     /locus_tag="O7798_000073"
                     /EC_number="2.3.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498768.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="gamma-glutamyltransferase"
                     /protein_id="HDC2862353.1"
                     /translation="MVINLNDKQTKTSKEGLISVSHPLAAKIGKDVLDQGGNAMDAVI
                     AIQLALNVVEPFASGIGGGGYLLYYEQSTGSITAFDARETAPEHVDKQFYLDDSGEYK
                     SFFDMTTHGKTVAVPAIPKLFDYIHKRYAKLSLEDLINPAIELAIEGHAANWATEKYS
                     RQQHARLTKYHETAQVFTHENQYWREGDWIVQPELGKTFQILREQGFNAFYKGDIAKQ
                     LVNVVKACGGTITLEDLAKYDIQIKAPISATFKDYDIYSMGPSSSGGITVIQILKLLE
                     HVDLPSMGPRSVDYLHHLIQAMHLAYSDRAQYLADDNFHEVPVQSLIDDDYLKARSTL
                     IDSNKANIDIEHGVVSDCISHTDVEENHTETTHFCVIDKEGNIASFTTSIGMIYGSGI
                     TIPGYGVLLNTTMDGFDVVDGGINEIAPYKRPLSNMAPTIVMYHGKPILTVGAPGAIS
                     IIASVAQTLINVLVFGMDIQQAIDEPRIYSSHPNRIEWEPQFSQSTILALIAHGHAME
                     HKPDAYIGDVHGLQVDPTTYEASGGSDDTREGTVMGGEVLVIRKQPLPYRQMYDSDGF
                     RLYFNDVQLPLLADQVRWMHDKYWVDESVVRIIFPEVSAHIEDLRSYENAGENYIDIA
                     WLARKYAYQVTLKDDGLYLTDDTYTSVKRNTNAYYRYDRDSITR"
     gene            complement(9282..10055)
                     /locus_tag="O7798_000074"
     CDS             complement(9282..10055)
                     /locus_tag="O7798_000074"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498769.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tandem-type lipoprotein"
                     /protein_id="HDC2862354.1"
                     /translation="MKAHKIFWLNLAAIIIISIVVSGDMFLAMKWEQIHLKDGLKKVL
                     STYPIKNLETLYEIDGHDNPHYENNDQDTWYIESSYSVVGSDELLKEDRMLLKVDKNT
                     HKITGEYDTTTNDRKNATDSTYKSYPVKVVNNKIVFTKDVKDPALKQKIENNQFLIQS
                     GDLTSILNSNDLKVTHDPTTDYYNLSGKLSNDNPNVKQLKRRYNIPKNASTKVELKGM
                     SDLKGNNHQDQKLYFYFSSPGKDQIIYKESLTYNKISEH"
     gene            complement(10245..10871)
                     /locus_tag="O7798_000075"
     CDS             complement(10245..10871)
                     /locus_tag="O7798_000075"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498770.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FMN-dependent NADH-azoreductase"
                     /protein_id="HDC2862355.1"
                     /translation="MAKVLYITAHPFNELVSNSMAAGKAFIETYQQQHPDDEVKHIDL
                     FETYIPVIDKDVLTGWGKMSNGETLTDDEQMKVSRLSDILEEFLSADKYVFVTPMWNL
                     SFPPVVKAYIDAISIAGKTFKYSAEGPQGLLTDKKVLHIQSRGGYYTEGPAADFEMGD
                     RYLRTIMTFLGVPSYETIIIEGHNAEPHKTEEIKATSINNAEKLATTF"
     gene            11080..11658
                     /locus_tag="O7798_000076"
     CDS             11080..11658
                     /locus_tag="O7798_000076"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498771.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M23 family metallopeptidase"
                     /protein_id="HDC2862356.1"
                     /translation="MTKRPKRILATIIIFLSLLFTIIYIDDIQKWFNQYTDKLTQNHK
                     GQGHSKWEDFFRGSRITETFGKYQHSPFDGKHYGIDFALPKGTPIKAPTNGKVTRIFN
                     NELGGKVLQIAEDNGEYHQWYLHLDKYNVKVGDRVKAGDIIAYSGNTGIQTTGAHLHF
                     QRMKGGVGNAYAEDPKPFIDQLPDGERSLYDL"
     gene            12041..13138
                     /gene="ugpC"
                     /locus_tag="O7798_000077"
     CDS             12041..13138
                     /gene="ugpC"
                     /locus_tag="O7798_000077"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498772.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sn-glycerol-3-phosphate ABC transporter
                     ATP-binding protein UgpC"
                     /protein_id="HDC2862357.1"
                     /translation="MAELKLEHIKKTYDNNNTVVKDFNLHITDKEFIVFVGPSGCGKS
                     TTLRMVAGLESITSGDFYIDGERMNDVEPKNRDIAMVFQNYALYPHMTVFENMAFGLK
                     LRKVNKKEIEQKVNEAAEILGLTEYLGRKPKALSGGQRQRVALGRAIVRDAKVFLMDE
                     PLSNLDAKLRVQMRTEILKLHKRLNTTTIYVTHDQTEALTMASRIVVLKDGDIMQVGT
                     PREIYDAPNCIFVAQFIGSPAMNMLNATVEMDGLKVGTHHFKLHNKKFEKLKAAGYLD
                     KEIILGIRAEDIHEEPIFIQTSPETQFESEVVVSELLGSEIMVHSTFQGMELISKLDS
                     RTQVMANDKITLAFDMNKCHFFDEKTGNRIV"
     gene            13151..14422
                     /locus_tag="O7798_000078"
     CDS             13151..14422
                     /locus_tag="O7798_000078"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498773.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="extracellular solute-binding protein"
                     /protein_id="HDC2862358.1"
                     /translation="MSKILKCITLAVVMLLIVTACGPNRSKEDIDKALNKDNSKDKPN
                     QLTMWVDGDKQMAFYKKITDQYTKKTGIKVKLVNIGQNDQLENISLDAPAGKGPDIFF
                     LAHDNTGSAYLQGLAAEIKLSKDELKGFNKQALKAMNYDNKQLALPAIVETTALFYNK
                     KLVKNAPQTLEEVEANAAKLTDSKKKQYGMLFDAKNFYFNYPFLFGNDDYIFKKNGSE
                     YDIHQLGLNSKHVVKNAERLQKWYDKGYLPKAATHDVMIGLFKEGKVGQFVTGPWNIN
                     EYQETFGKDLGVTTLPTDGGKPMKPFLGVRGWYLSEYSKHKYWAKDLMLYITSKDTLQ
                     KYTDEMSEITGRVDVKSSNPNLKVFEKQARHAEPMPNIPEMRQVWEPMGNASIFISNG
                     KNPKQALDEATNDITQNIKILHPSQNDKKGD"
     gene            14425..15693
                     /locus_tag="O7798_000079"
     CDS             14425..15693
                     /locus_tag="O7798_000079"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498774.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sugar ABC transporter permease"
                     /protein_id="HDC2862359.1"
                     /translation="MTKRNPKLAALLSVIPGLGQFYNKRPIKGTIFFIFFISFISVFY
                     SFLNIGFWGLFTLGTVPKLDDSRVLLAQGIISILLVAFAIMLYIINILDAYRNAERFN
                     RNEEIKDPKARMVATWDKTFPYLLISPGTFLLIFVVVFPLIFMFGVAFTNYNLYNAPP
                     RHTLEWVGLDNFKTLFTIGVWRKTFFSVITWTLVWTLVATTLQIALGLFLAIIVNHPV
                     VKGKKFIRTVLILPWAVPSFVTILIFVALFNDEFGAINNDILQPLLGVAPAWLSDPFW
                     AKVALIGIQVWLGFPFVFALFTGVLQSISSDWYEAADMDGASSWQKFRNITFPHVIYA
                     TAPLLIMQYAGNFNNFNLIYLFNKGGPPVSGQNAGSTDILISWVYNLTFEFNNFNMGA
                     VVSLIIGFIVAIVAFIQFRRTSTFKDEGGL"
     gene            15695..16534
                     /locus_tag="O7798_000080"
     CDS             15695..16534
                     /locus_tag="O7798_000080"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498775.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sugar ABC transporter permease"
                     /protein_id="HDC2862360.1"
                     /translation="MTKKKNILKAIGIYSFIAMMFVIILYPLLWTFGISLNPGTNLYG
                     AKMIPDNATFKNYAFLLFDDSSQYLTWYKNTLIVASANALFSVIFVTLTAYAFSRYRF
                     VGRKYGLITFLILQMFPVLMAMVAIYILLNTIGLLDSLFGLTLVYIGGSIPMNAFLVK
                     GYFDTIPKELDESAKIDGAGHMRIFLQIMLPLAKPILAVVALFNFMGPFMDFILPKIL
                     LRSPEKFTLAVGLFNFINDKYANNFTVFAAGAIMIAVPIAIVFLFLQRYLVSGLTTGA
                     TKG"
     gene            16608..17684
                     /locus_tag="O7798_000081"
     CDS             16608..17684
                     /locus_tag="O7798_000081"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498776.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Gfo/Idh/MocA family oxidoreductase"
                     /protein_id="HDC2862361.1"
                     /translation="MTIKVGIIGCGGIANGKHMPSLQKVENVEMIAFCDVDISKAASA
                     AEAYGTDNAKVYDDYKALLKDDTIDVIHVCTPNDSHCEITVAGLHAGKHVMCEKPMAK
                     TTAEAQKMIDTAKSTGKKLTIGYQNRFRADSQFLHQAAQRGDLGDIYFGKAHAIRRRA
                     VPTWGVFLDEEAQGGGPLIDIGTHALDLTLWMMDNYEPESVMGSTFHKLNKQHHAANA
                     WGSWNPDEFTVEDSAFGFIKMKNGATIILESAWAINSLEVDEAKCSLSGTKAGADMKD
                     GLRIHGEDMGTLYTKHVELENKGVDFYEGNEVDEAEEEAKAWIDAVVNDTEPVVKPEQ
                     AMVVTKILEAIYQSAKSGKAIYFE"
     gene            17709..18749
                     /locus_tag="O7798_000082"
     CDS             17709..18749
                     /locus_tag="O7798_000082"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498777.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Gfo/Idh/MocA family oxidoreductase"
                     /protein_id="HDC2862362.1"
                     /translation="MTKLKVGVIGVGGIAQDRHIPALLKLKDTVSLVAVQDINTVQMI
                     DVAKRFNIPHAVETPSELFKLVDAVVICTPNKFHADLSIEALNHGVHVLCEKPMAMTT
                     EECDRMIEAANKNHKLLTVAYHYRHTDVAITAKKAIESGVVGKPLVARVQAMRRRKVP
                     GWGVFTNKALQGGGSLIDYGCHLLDLSLWLLGKDMVPHEVLGKTYNQLSKQPNQINDW
                     GTFDHTKFDVDDHVTSYMTFANRASMQFECSWSANIKEDKVHVSLSGEDGGINLFPFE
                     IYEPRFGTIFESKANVEHNEDIAGERQARNFVNACLGIEEIVVKPEEARNVNALIEAI
                     YRSDLDNKSIQL"
     gene            18804..19772
                     /locus_tag="O7798_000083"
     CDS             18804..19772
                     /locus_tag="O7798_000083"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498778.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sugar phosphate isomerase/epimerase"
                     /protein_id="HDC2862363.1"
                     /translation="MKIGVFSVLFYDKNFEDMLDYVSESGLDMIEVGTGGNPGDKFCK
                     LDELLENEDKRQAFMKSITDRGLQISGFSCHNNPISPDPIEAKEADETLRKTIRLANL
                     LDVPVVNTFSGIAGSDDTAKKPNWPVTPWPTAYSEIYDYQWNEKLIPYWQDLAEFAKE
                     QDVKIAIELHAGFLVHTPYTMLKLREATNEYIGANLDPSHLWWQGIDPIAAIRILGQA
                     NAIHHFHAKDTYINQENVNMYGLTDMQPYGNVATRAWTFRTVGYGHSPYVWADIISQL
                     IINGYDYVLSIEHEDPIMSVEEGFQKACQTLKSVNIYDKPADMWWA"
     gene            complement(20132..20626)
                     /locus_tag="O7798_000084"
     CDS             complement(20132..20626)
                     /locus_tag="O7798_000084"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002454321.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="isoprenylcysteine carboxyl methyltransferase
                     family protein"
                     /protein_id="HDC2862364.1"
                     /translation="MILSILLIFFCIRLVSLKISINHSKQLKADGAVEYGVKNSKFLA
                     ITHVLIYVLAGVEAFINKDTFSFANGIGLVILIFANIMLFMVIKTLGGIWTLKLFILP
                     NHPIIKSGLYKITKHPNYFLNIIPELIGVLLLTHATYTTILLVPYAYFLYVRIKQEEK
                     LMNI"
     gene            20859..22238
                     /gene="uhpT"
                     /locus_tag="O7798_000085"
     CDS             20859..22238
                     /gene="uhpT"
                     /locus_tag="O7798_000085"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498780.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hexose-6-phosphate:phosphate antiporter"
                     /protein_id="HDC2862365.1"
                     /translation="MNFFDIHKIPNKGIPLSVQRKLWLRNFMQAFFVVFFVYMAMYLI
                     RNNFKAAQPFLKEEIGLSTLELGYIGLAFSITYGLGKTLLGYFVDGRNTKRIISFLLI
                     LSAITVLIMGFVLSYFGSVMGLLIVLWGLNGVFQSVGGPASYSTISRWAPRTKRGRYL
                     GFWNTSHNIGGAIAGGVALWGANVFFHGNVIGMFIFPSVIALLIGIATLFIGKDDPEE
                     LGWNRAEEIWEEPVDKENIDSQGMTKWEIFKKYILGNPVIWILCVSNVFVYIVRIGID
                     NWAPLYVSEHLHFSKGDAVNTIFYFEIGALVASLLWGYVSDLLKGRRAIVAIGCMFMI
                     TFVVLFYTNATSVMMVNISLFALGALIFGPQLLIGVSLTGFVPKNAISVANGMTGSFA
                     YLFGDSMAKVGLAAIADPTRNGLNIFGYTLSGWTDVFIVFYVALFLGMILLGIVAFYE
                     EKKIRSLKI"
     gene            complement(22597..23355)
                     /locus_tag="O7798_000086"
     CDS             complement(22597..23355)
                     /locus_tag="O7798_000086"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498781.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HDC2862366.1"
                     /translation="MFKVVICDDERIIREGLKQIIPWGDYHFNTIYTAKDGVEALSLI
                     QQHQPELVITDIRMPRKNGVDLLNDIAHLDCNVIILSSYDDFEYMKAGIQHHVLDYLL
                     KPVDHAQLEVILGRLVRTLLEQQSQNGRSLASCHDAFQPLLKVEYDDYYVNQIVDQIK
                     QSYQTKVTVSDLIQHIDVSESYAMRTFKDHVGITIVDYLNRYRILQSLQLLDRHYKHY
                     EIADKVGFSEYKMFSYHFKKYLQMSPSDYCKQAK"
     gene            complement(23348..24904)
                     /locus_tag="O7798_000087"
     CDS             complement(23348..24904)
                     /locus_tag="O7798_000087"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498782.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sensor histidine kinase"
                     /protein_id="HDC2862367.1"
                     /translation="MTAYKPYRHQLRRSLFASTIFPVFLVIIIGLVSFYAIYIWIEHR
                     TIHQHVDESQSSLHHTEKQIQTFITQHNNSFQELDLTNHHDVTATKRELLKLIHQQPA
                     TLYYELSGPNQFITNNYEHLNTKNMYLFSTHQLKFKNSTYMLKIYMANTPRLSEIKKD
                     NRQFALIVDQYDNILYANDDRFTIGEKYRPQQFGFMNESVKLNHADHRLIIYKDIHEN
                     IEDGITLLIVMAVVLVLLVIFGFISADNMAKRQTKDIETIIQKIYYAKNRHLGTYTPL
                     KNNSELEEINNYIYDLFESNEQLIHSIEHTERRLRDIQLKEIERQFQPHFLFNTMQTI
                     QYLITLSPKLAQTVVQQLSQMLRYSLRTNSHTVELNEELNYIEQYVAIQNIRFDDMIK
                     LHIESSEEARHQTIGKMMLQPLIENAIKHGRDTESLDITIRLTLARQNLHVLVCDNGI
                     GMSSSRLQYVRQSLNNDVFDTKHLGLNHLHNKAMIQYGSHARLHIFSKRNQGTLICYK
                     IPLSRGNVDV"
     gene            complement(24901..25869)
                     /locus_tag="O7798_000088"
     CDS             complement(24901..25869)
                     /locus_tag="O7798_000088"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498783.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="extracellular solute-binding protein"
                     /protein_id="HDC2862368.1"
                     /translation="MKSKIYILLLFLIFLSACANTRHSESDKNVLTVYSPYQSNLIRP
                     ILNEFEKQEHVKIEIKHGSTQVLLSNLHNEDFSERGDVFMGGVLSETIDHPEDFVPYQ
                     DTSVTQQLEDYRSNNKYVTSFLLMPTVIVVNSDLQGDIKIRGYQDLLQPILKGKIAYS
                     NPNTTTTGYQHMRAIYSMHHRVSDVHQFQNHAMQLSKTSKVIEDVAKGKYYAGLSYEQ
                     DARTWKNKGYPVSIVYPIEGTMLNVDGIALVKNAHPHPKRKKLVQYLTSRSVQQRLVA
                     EFDAKSIRKDVSEQSDQSIENLKNIPLIPKSKLPDIPHHKFLEMIQ"
     gene            26457..28706
                     /gene="pflB"
                     /locus_tag="O7798_000089"
     CDS             26457..28706
                     /gene="pflB"
                     /locus_tag="O7798_000089"
                     /EC_number="2.3.1.54"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498784.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="formate C-acetyltransferase"
                     /protein_id="HDC2862369.1"
                     /translation="MLETNKNHATAWQGFKNGRWNRHVDVREFIQLNYTLYEGNDSFL
                     AGPTEATSKLWEQVMQLSKEERERGGMWDMDTKVASTITSHDAGYLDKDLETIVGVQT
                     EKPFKRSMQPFGGIRMAKAACEAYGYELDEETEKIFTDYRKTHNQGVFDAYSREMLNC
                     RKAGVITGLPDAYGRGRIIGDYRRVALYGVDFLMEEKMHDFNTMSTEMSEDVIRLREE
                     LSEQYRALKELKELGQKYGFDLSRPAENFKEAVQWLYLAYLAAIKEQNGAAMSLGRTS
                     TFLDIYAERDLKAGVITESEVQEIIDHFIMKLRIVKFARTPDYNELFSGDPTWVTESI
                     GGVGIDGRPLVTKNSFRFLHSLDNLGPAPEPNLTVLWSVRLPDNFKTYCAKMSIKTSS
                     IQYENDDIMRESYGDDYGIACCVSAMTIGKQMQFFGARANLAKTLLYAINGGKDEKSG
                     AQVGPNFEGINSEVLEYDEVFKKFDQMMDWLAGVYINSLNVIHYMHDKYSYERIEMAL
                     HDTEIVRTMATGIAGLSVAADSLSAIKYAQVKPIRNEEGLVVDFEIEGDFPKYGNNDD
                     RVDDIAVDLVERFMTKLRSHKTYRDSEHTMSVLTITSNVVYGKKTGNTPDGRKAGEPF
                     APGANPMHGRDQKGALSSLSSVAKIPYDCCKDGISNTFSIVPKSLGKEPEDQNRNLTS
                     MLDGYAMQCGHHLNINVFNRETLIDAMEHPEEYPQLTIRVSGYAVNFIKLTREQQLDV
                     ISRTFHESM"
     gene            28729..29484
                     /gene="pflA"
                     /locus_tag="O7798_000090"
     CDS             28729..29484
                     /gene="pflA"
                     /locus_tag="O7798_000090"
                     /EC_number="1.97.1.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498785.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyruvate formate lyase-activating protein"
                     /protein_id="HDC2862370.1"
                     /translation="MLKGHLHSVESLGTVDGPGLRYILFTQGCLLRCLYCHNPDTWKI
                     SEPSREVTVDEMVNEILPYKPYFDASGGGVTVSGGEPLLQMPFLEKLFAELKENGVHT
                     CLDTSAGCANDTKAFQRHFEELQKHTDLILLDIKHIDNDKHIRLTGKPNTHILNFARK
                     LSDMKQPVWIRHVLVPGYSDDKDDLIKLGEFINSLDNVEKFEILPYHQLGVHKWKTLG
                     IAYELEDVEAPDDEAVKAAYRYVNFKGKIPVEL"
     gene            29820..31583
                     /locus_tag="O7798_000091"
     CDS             29820..31583
                     /locus_tag="O7798_000091"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498787.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycerophosphoryl diester phosphodiesterase
                     membrane domain-containing protein"
                     /protein_id="HDC2862371.1"
                     /translation="MKRISKDIWAVFKLLYQNKGRFSINALLLQLIMIFISSTYLILL
                     FNMMLKVAGQSQLTINNWTEIVSHPASVILLIIFILSVAFLIYVEFSLLVYMVYAGFD
                     RQIITFKSIFKNAFVNVRKLIGVPVIFFVIYLMLMIPIANLGLSSVLTKNIYIPKFLT
                     EELMKTTKGIIIYGTFMIAVFILNFKLIFTLPLTILNRQSLFKNMRLSWQITKRNKFR
                     LVIEIVILELIIGAILTLIISGATYLAICVDEEGDKFLVSSILFVVLKSALFFYYLFT
                     KLSLISVLVLHLKQENVLDQPGLEFKYPKPKRKSRFFIISMVLAVTCFIGYNMYLLYN
                     NTINTNISIIGHRGFEDKGVENSIPSLKAAAKANVEYVELDTIMTKDKQFVVSHDNNL
                     KRLTGVNKNISESNFKDIVGLKMRQNGHEAKFVSLDEFIETAKQSNVKLLVELKPHGK
                     EPADYTQRVIDILKKHGVEHQYRVMSLDYDVMTKLKKEAPYLKCGYIIPLQFGHFKET
                     SLDFFVIEDFSYSPRLVNQAHLENKEVYTWTINGEEDLTKYLQTNVDGIITDDPALAD
                     QIKEEKKDETYFDRSIRILFE"
     gene            complement(31747..32091)
                     /locus_tag="O7798_000092"
     CDS             complement(31747..32091)
                     /locus_tag="O7798_000092"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498788.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="complement inhibitor SCIN family protein"
                     /protein_id="HDC2862372.1"
                     /translation="MTTQMKIKTYLVAGIKAALLDTTGIKLASKSETTSHTYQHQALV
                     DQLHELIANTDLNKLSYLNLDAFQKRDILAAHYIAKSAIRTKNLDQMTKAKQRLESIY
                     NSISNPLHSQNN"
     gene            32281..34110
                     /gene="coa"
                     /locus_tag="O7798_000093"
     CDS             32281..34110
                     /gene="coa"
                     /locus_tag="O7798_000093"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498789.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="staphylocoagulase"
                     /protein_id="HDC2862373.1"
                     /translation="MKKQIISLGALAVASSLFTWDNKADAIVTKDYSGKSQVNAGSKN
                     GTLIDSRYLNSALYYLEDYIIYAIGLTNKYEYGDNIYKEAKDRLLEKVLREDQYLLER
                     KKSQYEDYKQWYANYKKENPRTDLKMANFHKYNLEELSMKEYNELQDALKRALDDFHR
                     EVKDIKDKNSDLKTFNAAEEDKATKEVYDLVSEIDTLVVSYYGDKDYGEHAKELRAKL
                     DLILGDTDNPHKITNERIKKEMIDDLNSIIDDFFMETKQNRPKSITKYNPTTHNYKTN
                     SDNKPNFDKLVEETKKAVKEADDSWKKKTVKKYGETETKSPVVKEEKKVEEPQAPKVD
                     NQQEVKTTAGKAEETTQPVAQPLVKIPQGTITGEIVKGPEYPTMENKTVQGEIVQGPD
                     FLTMEQSGPSLSNNYTNPPLTNPILEGLEGSSSKLEIKPQGTESTLKGTQGESSDIEV
                     KPQATETTEASQYGPRPQFNKTPKYVKYRDAGTGIREYNDGTFGYEARPRFNKPSETN
                     AYNVTTHANGQVSYGARPTQNKPSKTNAYNVTTHGNGQVSYGARPTQNKPSKTNAYNV
                     TTHANGQVSYGARPTYKKPSKTNAYNVTTHADGTATYGPRVTK"
     gene            complement(34292..34399)
                     /locus_tag="O7798_000094"
     CDS             complement(34292..34399)
                     /locus_tag="O7798_000094"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498790.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDC2862374.1"
                     /translation="MCVRTRLVSSSSARLSKAIIIAVIVVYHLDVRGLF"
     gene            complement(34713..35897)
                     /locus_tag="O7798_000095"
     CDS             complement(34713..35897)
                     /locus_tag="O7798_000095"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498792.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiolase family protein"
                     /protein_id="HDC2862375.1"
                     /translation="MQEAYIVAYGRSAAAKAKQGALFHERPDDVAAKVLQGVLKRIDG
                     KFNKNMIEDVIVGTAFPEGLQGQNIARTIALRAGLSDTVPGQTVNRYCSSGLQTIAIA
                     ANQIMAGQGDILVAGGVELMSAVPMGGNEPTNNPTLQYDDIGASYPMGLTAENVASQF
                     DVSREDQDAYAVRSHQRAYDAQRDGRFKDEIIPIQVNSVEYTNAGPKVHTNIFDQDEF
                     IRPDTTMEALAKLRTVFKADGTVTAGTSAPLSDGAGFVVLMSGDKVKELGVTPIARFV
                     GFKAVGVDPKIMGIGPAYAIPEVLSLSNLSVEDIDLIELNEAFASQTIASIKEVGLDI
                     SRTNVNGGAIALGHPLGATGAMLTARLLNEMGRRPDSRYGMVTMCIGVGMGAAAIFEY
                     VR"
     gene            complement(35927..38188)
                     /locus_tag="O7798_000096"
     CDS             complement(35927..38188)
                     /locus_tag="O7798_000096"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498793.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-hydroxyacyl-CoA dehydrogenase/enoyl-CoA
                     hydratase family protein"
                     /protein_id="HDC2862376.1"
                     /translation="MTINKVTVLGAGTMGAQLAALFVNAGLKVKLLDIVVDKNDPNLI
                     AKKSYDKITDKKRPLLFDLNLASHLTYGNFDDDLVNDDADLYIEAVKEDIEIKHAVWQ
                     QVLQHAKEDALFATNTSGIPINAIAQAFNEKDQERFFGLHFFNPPRIMKLVELIPTSH
                     TKESIILDVKNFAQNVLGKGVIVVNDVPGFVANRVGTQTMNDIMYRAEQHKISIVDVD
                     ALTGQAIGRPKTGTYALSDLVGLDIAVSVIKGMQQVPEETPYFHDVKIVNTLFDNGAL
                     GRKTKQGFYKKDKETKARLVYDVEKQDYVPVSQPQLPILNEFNKDLVHNLDTIFNAQD
                     EAGLFLWETLRNNFYYSAINVPKATDDFRDIDRALVWGFNWKLGPFQLWDAMGYERVK
                     TRMEDELGDLPQWISDLDGGFYKQDETIEYATPISHFVKDELWDKGDAKLSVTHDDQL
                     LLKLQSKNNVITDEFNDALVDAIDLLENDHYTSMVIYADGNNFSVGANLFLMKKAHED
                     GLVDDVVAQSIDKLHYSFNRLKYSLKPVVTAVQGRALGGGCELVLYSPIVVAASETYI
                     GLVEAGVGLLPSGGGLAEMADRILRTSHKFDDKQASMTKVLTNIAFAKVSTNAFEARR
                     YGYLRDTDTIIFNTAQRVEVALKRAKYEAETNYIPNPRHQYIALGEDFKALIQGQLDA
                     QRRGHFISDHDYHIALNIATILAGGDLPRNTFINQRYIQSLEKIGFIDLLKSKKSYER
                     IAHMLKTGKPLRN"
     gene            complement(38374..39585)
                     /locus_tag="O7798_000097"
     CDS             complement(38374..39585)
                     /locus_tag="O7798_000097"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498794.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase family protein"
                     /protein_id="HDC2862377.1"
                     /translation="MTFEKETVLKTLFPEDVLSIAKGLTDGEVEFLQQVDSLLESKYR
                     ENINQHWIDATVPEDYFKDLGELNYFNNPLLYKDRPNAKMPSQLFQFFMSYLLARFDI
                     SLATLLGVHQGLGHNTFYFGGSKEQIAKYVPKLQSHELRTCFALTEPEHGSDVAGGLE
                     TVAERQGDTWVINGEKKWIGGAHVSDVIPVFAVNKETGKPHCFVVRPEQDGVDIEVID
                     NKIALRIVPNALIKLTNVKVDEADRLQNITSFKDIAKILYSTRAGVAYMATGGMAGAL
                     RATLDYVTERKQFGKPISKYQLIQEKLAMMQGNLAQAMATCAQLANMQAHGEYDEVAT
                     STAKMMNALRLRETVAMGRGITGGNGILADDYDIARFFSDAEAIYTYEGTHEINALVI
                     GRALTGDSAFV"
     gene            complement(39697..41202)
                     /locus_tag="O7798_000098"
     CDS             complement(39697..41202)
                     /locus_tag="O7798_000098"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498795.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl--CoA ligase"
                     /protein_id="HDC2862378.1"
                     /translation="MNFDWIKTRSDFDDDKPAVIDHAKQTSWTYQQLNARADNMAHYL
                     TSQGVKKGDVIGIFAPNDIAILDLLFACFKTGAVFLPLNWRLNPKEIAAIVEDAQLKL
                     LFYAEKHLSSLTDIDQNLLHMDIDVAQYDEIVNPDYHQPFQATPVEPQDLAALIYTSG
                     TTGSPKGVMFSYESFVHNGANLELTYKFNSNYITIVSTPMFHVLGFNDTVLPVLMSGG
                     TLILQRYFNGEELNDMIAQYHPTFIIMIPTMYYSTLRASNFNPENFRAMDYIIQGGSQ
                     PLPSIQAAFKQYGINIINGYGLTEAPLVLVNTPENSKRKPMSIGKAVMFVDARILDDN
                     GEEVPTGEIGELAIKAKNVTPGYWNKPAETAKAFHGRYLLTGDLAKMDNDGDIFIIDR
                     KKELIITGGENVLPSEVENALAEHPLVDRCVVVGYDHPKYGESIAAAIILREDEPHYA
                     EILNQHMRSRLAGYKVPRMYVPVTHMPLNSTQKPDKLAIRQMMNDKVSQTL"
     gene            complement(41228..42805)
                     /locus_tag="O7798_000099"
     CDS             complement(41228..42805)
                     /locus_tag="O7798_000099"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498796.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl CoA:acetate/3-ketoacid CoA transferase"
                     /protein_id="HDC2862379.1"
                     /translation="MEVTCLKQITWHDLQHIIKDGDVIGLPALAVANLPAEVLRAVLA
                     QHDTYHTPNDLTFILANDIHSLGAAPDLDDFIERRMIKRVIMSILTASSKTAQAMKNN
                     DIEAYFLPQGIIATHYRQSNQLLPGVITKIGLNTAVDPRYGGGKVNTRTTDDLVSLVT
                     INDETYLHYTFPSVDVALLRGTYADQQGNIYLTQEAYLSECYHVALNAKANHGKVIVQ
                     VKALVDDYQLKPNEVVIPGNLVDYVYVTEDEKNHRQVIQSHYLPALSGEERIDGIPEP
                     ALPFNSRKLILRRAAQFLTYGDTISIGYGINNELSNLLHEECVEHDVQPILDVGIFGG
                     FVGSREHFGMNYNADVRMPHDRAWDFIYNNGVSVAYLSFAEVDQYGNVNVSYFNDRLN
                     GCGGFIDITQSVNKIIFSGTFVAGSHVSCHNQRLNIETEGQNQKFVSDVSHIDFNAQY
                     SQSLEQEIYFVTDRAVFELTNQGLKLIEIAPGLDLHKDILNQMAFKPIIADHLKLIDT
                     SIYKEKWGQLKQSIHKV"
     gene            43246..44388
                     /locus_tag="O7798_000100"
     CDS             43246..44388
                     /locus_tag="O7798_000100"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498797.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PrsW family intramembrane metalloprotease"
                     /protein_id="HDC2862380.1"
                     /translation="MSSASTQSTKTSDIHNESIDKQMEAKAHETAQNTDLKNEARSLF
                     DNATKSIGRLAGNDESLNLNLKDMLSEVFKPHTKNEADEIFIAGTAKTTPAICDISEE
                     WGKPWLFSRVFIAFTVTFIGLWVMAAIFNNTNAIPGLIFIGALTVPLSGLFFFYESNA
                     FKNISIFEVIIMFFIGGVFSLLSTMVLYRFVVFSDQFERFGSLTFFDAFLVGLVEETG
                     KALIIVYFVNKLKTNKILNGLLIGAAIGAGFAVFESAGYILNFALGENVPLLDIVFTR
                     AWTAIGGHLVWSAIVGAAIVIAKEQHGFEFKDIFDKRFLIFFLSAVVLHGIWDTSLTV
                     LGSDTLKIFILIVIVWILVFILMGAGLKQVNLLQKEFKEQQKKVDE"
     gene            complement(44702..46177)
                     /locus_tag="O7798_000101"
     CDS             complement(44702..46177)
                     /locus_tag="O7798_000101"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000669654.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HDC2862381.1"
                     /translation="MKFKRLATIFSAVLVLSGCGSMHSSGKDLNISLPLKTKSIAPYE
                     TDVPVKIGAAESLFKTNDQGKIEKALVKSYHQPNDTTLDIELKDNIKFQNGQKLTAEK
                     VKSSLENSMKKSDLVKYSLPISSITAKGQKLTIKTNSAYPELVSELANPFMAIYDTDA
                     KSDVNQTPVGTGPYQIKDYKQSRKISLSNFKDYWQGKPKLDHITVTYQEDGNNRVRNL
                     ESQKDDLITDVPVNKVQDIENNQNLKVSKESGFRTSLLMYNHTNKKMTKSVREALDHI
                     IDRQGIADHIYQGYAKPATSPFNDKIPYIKEPKLTKQNIEQAKMLLAKDGYTKEHPLK
                     IKLITYDGRPELSKIAQVLQSDAKKANIEIDIKSVDDIEGYLKDRSAWDATMYSFGTI
                     PRGDTGYFFNQAYKKDGAINKGDYNNSNVDDLINQLNHTVDVKERHNISNDIIKLSSR
                     DVPNSYIAYNDQIVAANSKVKNYKVTPEGIYLIDYRTTIER"
     gene            complement(46375..46731)
                     /locus_tag="O7798_000102"
     CDS             complement(46375..46731)
                     /locus_tag="O7798_000102"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498799.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF488 domain-containing protein"
                     /protein_id="HDC2862382.1"
                     /translation="MTVDIGRIYDNKDNTDAIRILVDRVWPRGISKRTANLDYWLKDI
                     APSTELRQWFQHDPKLFGAFKEKYEKELRDQDAQKDAFEKLKDIVNQHNHVLLLYAAK
                     DTKHNQAVVLQQLLNT"
     gene            complement(46888..47061)
                     /locus_tag="O7798_000103"
     CDS             complement(46888..47061)
                     /locus_tag="O7798_000103"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498800.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDC2862383.1"
                     /translation="MKLNQRYVKVFALYFVSIVTANIIVKNNNLIKTLIQTIAGYTVF
                     AVGLKYLTKRKNK"
     gene            complement(47087..48232)
                     /locus_tag="O7798_000104"
     CDS             complement(47087..48232)
                     /locus_tag="O7798_000104"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498801.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitric oxide dioxygenase"
                     /protein_id="HDC2862384.1"
                     /translation="MLTEQEKDIIKQTVPLLKEKGTEITSIFYPKMFKAHPELLNMFN
                     QTNQKRGMQSSALAQAVMAAAVNIDNLSVIKPVIMPVAYKHCALQVYAEHYPIVGKNL
                     LKAIQDVTGLEENDPVIQAWAKAYGVIADVFIQIEKEIYDQMMWIGFKPFKITNIKQE
                     SEDIKSFTVETEEYDFSEFTPGQYITVDVSSDKLPYRAKRHYSIVSGEKNHLTFGVKR
                     DVTTEHEGEVSTILHDEIKEGDMINLAAPVGGFVLENTTEPQLFLGSGIGVTPLVAMY
                     EAASAKGLDTQMVQVAENEQHLPFKDNFNSIASHHDNAKLYTHLKDKQGYIGAEELQV
                     FLANKPEIYICGGTKFLQSMIEALKSLNYDMDRVHYETFIPRLSVAV"
     gene            48387..48494
                     /locus_tag="O7798_000105"
     CDS             48387..48494
                     /locus_tag="O7798_000105"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498802.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDC2862385.1"
                     /translation="MSVCTPTIERIYLTNSKNIVVFLEKSKHDNKNVKV"
     gene            48805..49758
                     /locus_tag="O7798_000106"
     CDS             48805..49758
                     /locus_tag="O7798_000106"
                     /EC_number="1.1.1.27"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017804598.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-lactate dehydrogenase"
                     /protein_id="HDC2862386.1"
                     /translation="MNKFKGNKVVLIGNGAVGSSYAFSLVNQSIVDELVIIDLDTEKV
                     RGDVMDLKHATPYSPTTVRVKAGEYSDCHDADLVVICAGAAQKPGETRLDLVSKNLKI
                     FKSIVGEVMASKFDGIFLVATNPVDILAYATWKFSGLPKERVIGSGTILDSARFRLLL
                     SEAFDVAPRSVDAQIIGEHGDTELPVWSHANIAGQPLKTLLEQRPEGKAQIEQIFVQT
                     RDAAYDIIQAKGATYYGVAMGLARITEAIFRNEDAVLTVSALLEGEYEEEDVYIGVPA
                     VINRNGIRNVVEIPLNDEEQSKFAHSAKTLKDIMAEAEELK"
     gene            complement(50078..51607)
                     /locus_tag="O7798_000107"
     CDS             complement(50078..51607)
                     /locus_tag="O7798_000107"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498805.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS transporter subunit EIIC"
                     /protein_id="HDC2862387.1"
                     /translation="MKSLFEKAQQFGKSFMLPIAILPAAGLLLGIGGALSNPNTVKAY
                     PILDITLLQNIFTLMSAAGSIVFQNLPVIFAIGVAIGLSRSDKGTAGLAALLGFLIMN
                     ATMNGLLTITGTLAKDQLAQNGQGMVLGIQTVETGVFGGIITGIMTAILHNKYHKVVL
                     PPYLGFFGGSRFVPIVTAFAAIFLGVLMFFIWPSIQAGIYHVGGFVTKTGAIGTFVYG
                     FILRLLGPLGLHHIFYLPFWQTALGGTLEVKGHLVQGTQNIFFAQLGDPDVTKYYSGV
                     SRFMSGRFITMMFGLCGAALAIYHTAKPEHKKVVGGLMLSAALTSFLTGITEPLEFSF
                     LFVAPILYVIHAFFDGLAFMMADIFNITIGQTFSGGFIDFLLFGVLQGNSKTNYLYVI
                     PIGIVWFCLYYIVFRFLITKFNFKTPGREDKAAAQQVEATERAQTIVAGLGGKDNIEI
                     VDCCATRLRVTLHQNDKVDKVLLESTGAKGVIQQGTGVQVIYGPHVTVIKNEIEELLG
                     D"
     gene            51969..52904
                     /locus_tag="O7798_000108"
     CDS             51969..52904
                     /locus_tag="O7798_000108"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498806.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleoside hydrolase"
                     /protein_id="HDC2862388.1"
                     /translation="MKRKIIMDCDPGHDDAIALILAGAIDSPLEILAVTTVAGNQSVD
                     KNTTNALNVLDIMGRQDIAVAKGADRPLIKPAAFASEIHGESGLDGPKLPSTPSRQAV
                     AMPASDVIINKVMTSDTPVTIVATGPLTNVATALIREPRIAEHIESITLMGGGTFGNW
                     TPTAEFNIWVDAEAAKRVFESGITINVFGLDVTHQVLADDHVIERFESINNPVAQFVV
                     ELLQFFKKTYKTHFNMDGGPIHDACTILYLLQPELFTMVPVNIDIEHQSPLTYGTMAV
                     DLNHVTGKPANAYFATAVDVEEVWNLIDHKLRTYE"
     gene            53014..53112
                     /locus_tag="O7798_000109"
     CDS             53014..53112
                     /locus_tag="O7798_000109"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498807.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDC2862389.1"
                     /translation="MYVKNASKKHKTQKYMQKFQLLYFKRLKSQKI"
     gene            53243..55339
                     /locus_tag="O7798_000110"
     CDS             53243..55339
                     /locus_tag="O7798_000110"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498808.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcription antiterminator"
                     /protein_id="HDC2862390.1"
                     /translation="MNGDNQQILREIVLNPTIHGKELESIFGLSRRQLGYRIQKINLW
                     LEQEGYPKLERTSQGNFIVSSEIMTLFKRDVSEQQMLNGNNVIFSIETRRYYLMLMLF
                     SKENAMSLNHFSIDLQVSKNTVIHDINHVKEQLENHGLSLKYSRKHGYEIVGDEFEVR
                     RFFIKLIDQRLNHDITKSEVLKALNLTFEDIAYQKDKIKQVEQFLKSRFIDKSLSSLP
                     YVLCVIRRRIQSGHVMNPLNINYQYLRDTKEYQATEIMTQHEPDLPEAEKLYLTLHLL
                     STSVQWTDLQESDSISNLTMAIAQMIHHFEQITFINIEDKEKLSQQLLLHLTPAFYRI
                     KYNLTDRDELINPLQGNYQSLFHMVKQSCQSLTEYFGKSLPDNEIAYLTMLFGGSLRR
                     QDENFDGKIKAIIVCTQGTSVSQMMLYELRNLFPEIIFLDAISLRTFENYTLDYDIVF
                     SPMFVLTHKKLFITKVALSENEQRKLRKEVMKYINKESADIDKEINKLMALIERTTTV
                     NEITELRDGLEDFIANYNSISTINGSIVTQNKTLDLADLIPARHVKRMHHVENIDEAI
                     AKASDVLVANHFIDIKYIHEMQQVFDDSYMVIMQNIAIPHAYSEKHVHKTAMSMLILQ
                     EPIYMSDGTAIHIIVPIAAVDKVTHLRALLQLRDVAQDNDAIKRIIQSRKNSDVNEIL
                     KNYSNKEARENGWDSN"
     gene            55324..55791
                     /locus_tag="O7798_000111"
     CDS             55324..55791
                     /locus_tag="O7798_000111"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498809.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS sugar transporter subunit IIA"
                     /protein_id="HDC2862391.1"
                     /translation="MGQQLVHKENIMLNLSATDKESVLSQMSDVLFQNGFVKSTFKDA
                     VIDREKEFATGLPTHLCSVAIPHTDVEHINHRTIGVAVLEKEVPFIEMGTLDQQTEVK
                     IVFMLAMDKVDDQLKLLQQLMQIFQSEEKLEQILRTKDETILATLINDYLEYN"
     gene            55814..56092
                     /locus_tag="O7798_000112"
     CDS             55814..56092
                     /locus_tag="O7798_000112"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498810.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS sugar transporter subunit IIB"
                     /protein_id="HDC2862392.1"
                     /translation="MKQVLVACGAGIATSTVVNNAIEEMAKEHNIKVDIKQIKITEVG
                     PYEDTADLLVTTAMTKKEYKFPVINARNFLTGIGIEETKQQILTELQK"
     gene            56319..57578
                     /locus_tag="O7798_000113"
     CDS             56319..57578
                     /locus_tag="O7798_000113"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498811.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS galactitol transporter subunit IIC"
                     /protein_id="HDC2862393.1"
                     /translation="MSYFTDFVRGFLDLGATVILPVVIFLLGLFFRQKIGAAFRSGLT
                     IGVAFVGIFLVIDLLVKNLGPAAQAMVKNLGVSLNVIDVGWPATSSIAWASSVAAFII
                     PLGIIVNVVLLVTKVTKTMNVDIWNFWHYTFTAAMVYAVSGSIWQALLAAVIFQIICL
                     KVADWTAPMMSEFFDLPGVSIATGSTISYAPGIYLVKLLQKVPGLNKLDADPETIQKR
                     FGAFGESIFVGLILGLGIGVLAGYKPGDIINLGMSMAAVMVLMPRMVKILMEGLMPVS
                     ESARTWLNKRFGEREIYIGLDAAVALGHPAVISTALILVPITVLLAVILPGNQVLPFG
                     DLATIPFVVAFIVGAARGNIIHSVIVGTIMIAISLYIATDVAPIFTDMAKGTNVQMPK
                     GSSEISSIDQGGNIVNYLIFKLFSLFN"
     gene            57596..58651
                     /locus_tag="O7798_000114"
     CDS             57596..58651
                     /locus_tag="O7798_000114"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498812.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc-binding dehydrogenase"
                     /protein_id="HDC2862394.1"
                     /translation="MKALVKTREGHGNLELLDKEVATPLDDKVKIKVHYAGICGTDIH
                     TYEGHYKVNFPVTLGHEFSGEIVEVGADVKDFKVGDRVTSETTFYVCNECEYCKSKDY
                     NLCNHRKGIGTQVDGAFTNYVIAREESLHHIPDEVSYQSAAMTEPLACAHHGVSKIQV
                     NSGDVAVVMGPGPIGLLVAQVLKSKGATVVVTGLDNDKVRLDKAEALHMDYVVNLQQT
                     DLKTYINGITDGYGADVVVECSGAVPAARQGLDILRKKGFYSQIGIFKDAEIPFDMEK
                     VIQKEITVVGSRSQKPADWEPSLQLMADGLVNAEALVTKIYDISKWDEAYQHLKSGEG
                     IKALLKPLDLDENEGEN"
     gene            58653..58799
                     /locus_tag="O7798_000115"
     CDS             58653..58799
                     /locus_tag="O7798_000115"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498813.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDC2862395.1"
                     /translation="MVESMLTFMLGPLRQITDFYMEHLLVSNSIVIAGYFATGIFKKK
                     KVVN"
     gene            58823..59866
                     /locus_tag="O7798_000116"
     CDS             58823..59866
                     /locus_tag="O7798_000116"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498814.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="galactitol-1-phosphate 5-dehydrogenase"
                     /protein_id="HDC2862396.1"
                     /translation="MKALKLYGVEDLRYEDNEKPVIESANDVIIKVRATGICGSDTSR
                     YKKMGPYIKGMPFGHEFSGVVDAIGSDVTHVNVGDKVTGCPAIPCYQCEYCLKGEYAR
                     CEKLFVIGSYEPGSFAEYVKLPAQNVLKVPDNVDYIEAAMVEPSAVVAHGFYKSNIQP
                     GMTVAVMGCGSIGLLAIQWARIFGAAHIIAIDIDAHKLDIATSLGAHQTINSKEENLE
                     KFIENHYANQIDLAIESSGAKVTIGQILTLPKKGGEVVLLGIPYDDIEIDRVHFEKIL
                     RNELTVCGSWNCLSSNFPGKEWTATLHYMKTKDINVKPIISHFLPLEKGPETFDKLVN
                     KKERFDKVMFTIY"
     gene            60394..61110
                     /locus_tag="O7798_000117"
     CDS             60394..61110
                     /locus_tag="O7798_000117"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498820.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-C-methyl-D-erythritol 4-phosphate
                     cytidylyltransferase"
                     /protein_id="HDC2862397.1"
                     /translation="MIYAGILAGGIGSRMGNVPLPKQFLDIDNKPILIHTIEKFILVS
                     EFNEIIIATPAQWISHTQDILKKYNITDQRVKVVAGGTDRNETIMNIIDHIRNVNGIN
                     NDDVIVTHDAVRPFLTQRIIKENIEVAAKYGAVDTVIEAIDTIVMSKDKQNIHSIPVR
                     NEMYQGQTPQSFNIKLLQDSYRALSSEQKEILSDACKIIVESGHAVKLVRGELYNIKV
                     TTPYDLKVANVIIQGDIADD"
     gene            61103..62128
                     /locus_tag="O7798_000118"
     CDS             61103..62128
                     /locus_tag="O7798_000118"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498816.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alcohol dehydrogenase catalytic
                     domain-containing protein"
                     /protein_id="HDC2862398.1"
                     /translation="MINQVYQLVAPRQFDVTYNNVDIYGNHVIVRPLYLSICAADQRY
                     YTGRRDENVLRKKLPMSLVHEAVGEVVFDSKGVFEKGTKVVMVPNTPTEQHHIIAENY
                     LASSYFRSSGYDGFMQDYVVMAHDRIVPLPNDIDLSTISYTELVSVSYHAIQRFERKS
                     IPLKTSFGIWGDGNLGYITAILLRKLYPEAKTYVFGKTDYKLSHFSFVDDIFTVNQIP
                     DDLKIDHAFECVGGKGSQVALQQIVEHISPEGSIALLGVSELPVEVNTRLVLEKGLTL
                     IGSSRSGSKDFEQVVDLYRKYPDIVEKLALLKGHEINVCTMQDIVQAFEMDLSTSWGK
                     TVLKWTI"
     gene            62150..63844
                     /locus_tag="O7798_000119"
     CDS             62150..63844
                     /locus_tag="O7798_000119"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000167965.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CDP-glycerol glycerophosphotransferase family
                     protein"
                     /protein_id="HDC2862399.1"
                     /translation="MTKTKQAIHIDNIYWERVQLYIEGHSEGVDLTSGQFVLRNLTET
                     KTLEANEMKIDGNTFICRFNVAILDDGYYLPMDKYLFVYHDQLEYIGQLNPNIIDQAY
                     AALNEEQIEEYNELTTQNGKVNYLLAYDAKVFRKGGVSQHTVYTITPEIASDVNEFVF
                     DIEITLPQEKSGVIATSAHWLHKQGHKASFESRSFLFKAIFNITKLLHIKRSKTILFT
                     SDSRPNLSGNFKYVYDELLRQKVDFDYDIKTVFKENITDRRKWRDKFRLPYLLGKADY
                     IFVDDFHPLIYTVRFRPSQEIIQVWHAVGAFKTVGFSRTGKKGGPFIDSLNHRSYTKA
                     YVSSETDIPFYAEAFGIREENVVPTGVPRTDVLFDEAYATQIKQEMEDELPIIKGKKV
                     ILFAPTFRGNGHGTAHYPFFKIDFERLARYCEKHNAVVLFKMHPFVKNRLNISREHRQ
                     YFIDVSDHREVNDILFVTDLLISDYSSLIYEYAVFKKPMIFYAFDLEDYITTRDFYEP
                     FESFVPGKIVQSFDALMDALDNEDYEVEKVVPFLDKHFKYQDGRSSERLVKDLFRR"
     gene            64272..65441
                     /locus_tag="O7798_000120"
     CDS             64272..65441
                     /locus_tag="O7798_000120"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498819.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CDP-glycerol--glycerophosphate
                     glycerophosphotransferase"
                     /protein_id="HDC2862400.1"
                     /translation="MIKNTIKKLIEHSIYTTFKLLSKLPNKNLIYFESFHGKQYSDNP
                     KALYEYLTEHSDAQLIWGVKKGYEHIFQQHNVPYVTKFSMKWFLAMPRAKAWMINTRT
                     PDWLYKSPRTTYLQTWHGTPLKKIGLDISNVKMLGTNTQNYQDGFKKESQRWDYLVSP
                     NPYSTSIFQNAFHVSRDKILETGYPRNDKLSHKRNDTEYINGIKTRLNIPLDKKVIMY
                     APTWRDDEAIREGSYQFNVNFDIEALRQALDDDYVILLRMHYLVVTRIDEHDDFVKDV
                     SDYEDISDLYLISDALVTDYSSVMFDFGVLKRPQIFYAYDLDKYGDELRGFYMDYKKE
                     LPGPIVENQTALIDALKQIDETANEYIEARTVFYQKFCSLEDGQASQRICQTIFK"
BASE COUNT        22030 a        10411 c        12205 g        21085 t
ORIGIN      
        1 tgggatggat tttgtgagag cttgaagtat aaaaatagat ttcataataa tatgatcaat
       61 ttagagaatt tagcgttctt tctcgatatc actactaatt actatagtat tgaggaattt
      121 agagaaagat ttgaaccatt atatagatct agaatagtta agttcattac agagaaaagt
      181 gaactaatgt caccaccaaa gggatttgca acggcaggaa gattgaattc taaatggata
      241 agcgtattat accttagtac aaaagaacag gtcagtatag aagaagttaa acctaagcat
      301 aatgacatta tttatatagg taaggttaag ttacaaaaaa acgtgacaaa agagaaattg
      361 aaaattgcga atttaactaa tttaactagt aatgcaatca aagctggcga tgatggattt
      421 agaaagtatt ttgtaaatta ccaaacatta aaaaagattc ataaaggaat aacaaatcca
      481 agcgatgaac aaggaataga ttatttgcca tttcaatatt tagctgatta tattcgaagc
      541 cttaaatatg acgggataat gtatgagagc atattacaag atggtacttt taactttgtg
      601 ttttttgatc aaagtttatt tgaatgtgtt aattatgaaa gaaaaagagt aagtgacgtt
      661 aaatatacat tgactaagct aagttgacac actcaaaaat ctgaatattc taataaaata
      721 taaataatcc cccgcacttc acatagtggc gggggattta ttctggcgtt aaaatgccca
      781 aagtatgggg gtgactctta aatcatggca aagcacctaa aacttgatat ggtgccgagc
      841 cctaacttag cacaatatag ttagtatgac aaagtcatct aacataacac atcagaagtc
      901 gcgcaattta tttcagacca tacagtgata aagttgcaca acgcatgact tttatttagc
      961 aataactgct acttctgaaa taagttgctt tgcatagtct gactgcggat gtttgataat
     1021 atcttctgtg ttattcagtt caacgatttc gccatttttc ataactgcaa cgcgatcaca
     1081 tatttcattg ataacaccca tgtcatgtgt gatgaataaa taagtgatgc cgaagtctaa
     1141 ctgtaattgt tttaataact cgatgatatc tttttgaatt gaaacgtcta aagcggacac
     1201 tgcctcgtcg caaacaatca ctttaggttc aacagcaagt gctctcgcga tacttacacg
     1261 ctgacgttgc ccaccagata attcgtgtgg atagcgatat aagaaagttt gatctaggcc
     1321 aaccttttct aacaacgata cgacagtttt aataatgtca tcattatctt tgactttccc
     1381 atgaatgatt agtggtcgtt taatcacatc aatgacttta aatcttggat taatagatgc
     1441 gaatggatct tgaaaaatca tttgtatctc ttgtcgtaaa gatttcaatt catcatcttt
     1501 aaataaactt aatggtaatt cgttatacca aataaagcct tctgacactt cctttagacc
     1561 gacgaccgtc ttagctaatg tcgatttccc tgaccctgat tcaccgacaa tgcctaatgt
     1621 ttcgcctttt ctaatagcca agttaatatc attaactgct cggtataggc tgccactcgg
     1681 tgatgtgtaa tccacgctca cgcgatcgaa ttttaataaa atatcattgt ttaacggtct
     1741 tggcggacgc gtttgatgaa tatcaggaat cgcatctatt aagcgttttg tataggtatg
     1801 ttgtggcgat ttaaaaatac tttcaaccgt gccactttca acgacacttc catctttcat
     1861 tacaatcaca tcgtcgcaaa attgatacac agcgcctaaa tcgtgagtga taaaaataat
     1921 agatgtttct gtgtactcat aaagggactt cattaactgc agtaattgat tttgtgtact
     1981 ggcatctaat gccgttgttg gttcatctgc gattaaaatt tgtggcttta aaatcaatgc
     2041 cattgctatc atgacacgtt gacgcatacc accagaaagt tcatgtggat aagcatcaaa
     2101 ttgtcgagtt gcatgtttta tacctacttt ttctaaaatg tctattgtca tcgactttgc
     2161 ttcagattta gatacacgtt tatgttgaaa tattacttct gtaatttgtt tgccaatcgt
     2221 taatcttgga ttcaacgaag agagtggatc ttgaaaaatc attgaaatat ccttacctcg
     2281 aatttgttgt aacgctgaag ttgataaatt atttaacgat tgcccattaa aaataatttc
     2341 tcctgttaat gtgtgatctg gataatctgg tagtagccct aaaatagatt tagcggtaat
     2401 actttttcct gatcctgatt caccaacaat acctaggata tgtttttttc gtaattcgaa
     2461 agagacgttt tttaccgctt gaactgtagt ttcatcataa ttgaattgta cattcagact
     2521 gttgacttct aataaatttg acatgatgtt gtgcctccct attcacaaat gtgtaaattt
     2581 attctatact tttgtatatc atagtaatct actcaagatt attttacaag gagtgattat
     2641 cataattact tatttagaat cttttaagtc gttgtatcac aaggcatttt acaagtttgt
     2701 attatcggta ttaagcttgc caatattttt atatgcagtg ataaagtttt tcttttctgc
     2761 taagaggaaa aatttttacg ctaataattc tgaaatttca gaaattgaac aggcgttaca
     2821 tcaaaaatat aaatatttat cgcagcaaaa gtcatccaca caaatacata aagaagcatt
     2881 aaaaatattc aaggcacaaa gttctaatac gagttcaaag aatattgaac aagcacattt
     2941 ttcaacatac tttgaaaatg tattatttca taagttcatc atgatcaaag tgatattggc
     3001 cttgccgatg ttcatcttat tgacttttta tttacagcca ttagttagat atatttttga
     3061 acgaattgtc atggctgtga ttgtcatcat tggtgttatt gtcagtgtgt ttaccattct
     3121 gtatttttca ccgcttgatg cggcttatag catactggga caaaatgcaa caaaggcaca
     3181 gatacatcaa ttcaatgtat tacatcatct taacgaacct tattttattc aattgtggga
     3241 taccatcaag ggtgttttta cctttgactt aggtacgact tacaaaggga atgaggttgt
     3301 gactaaagca gttggcgaaa gaattccaat tacaataatt gtcgcagtat tagcgctaat
     3361 ggtggcatta attattgcaa taccaattgg tattatcagt gcgatgaagc gaaatagttg
     3421 gcttgatatc acgttaatga taattgcatt aattggttta tctattccaa gtttctggca
     3481 agggctatta ttcattttag cgttctcatt gaaattggat attttgccac catcttatat
     3541 gccagaacat ccaatatcgt tgattttacc tgtacttgtc attggaacaa gtattgctgc
     3601 ttctatcacg cgtatgacaa ggtcttctgt acttgaagta atgcgcagcg attatgtttt
     3661 aactgcttat gcaaaaggat tatcgacgac acaagttgtt attaaacata ttttgaaaaa
     3721 tgccattatt ccaattgtaa cgttagttgg tcttctagtg gcagagttac taggcggttc
     3781 agcagtgacg gaacaagtat ttaacattaa tggtatcggg cgttatatcg tccaaaaaca
     3841 actaatacct gatattccag cagtcatggg tggggtcgta tatatatcaa ttgtaatatc
     3901 tttagcaaac ttaattattg atatatttta tgctttaatc gatccaaaat tacgtagtga
     3961 aatcaacgaa aggaagtgag gcatatggca caacttaatt caaagatagc ttccttaaaa
     4021 ttattcgcaa gttacgccat agcaacttat attttagtta tattaacgag tgcattaaat
     4081 ctttttaaag gttatgtggc cgatacgttc tatattgctg aaacattgct aatcgtttta
     4141 accatcattt taattattat tttaacaacg gaacaaacat ggaagcatca tgacctatgg
     4201 cgacgtatcg tcgaagtgtt gttattgttg atgacattaa caggcaacgt atttacatta
     4261 ttaatgtttg taagtattag acgttaccaa cgtacatcgc aaatacatag ttataacggg
     4321 tgggaatcgt ttatacgaaa aactactaga catcgtattg cgattatcgg gttacttatt
     4381 ttagtctaca tgctgacatt atcaattgtg tcacaattta catttgatac gacattggct
     4441 actaaaaatc agttcaatgc actgttacat ggaccgagtc tagcctatcc gtttggtact
     4501 gatgatttcg gtagagactt atttacacgc gtagttgtag gaacgaagct gacattttca
     4561 atttcaatta tttcagtagt tattgcagtt atttttggtg tgttactagg cactatcgca
     4621 ggttatttta atcatattga taatttaata atgcgaattt tagatgtagt gtttgcaatt
     4681 ccatcattat tgttagcggt ggcaattatt gcatcatttg gagcaagtat tccaaattta
     4741 attattgctt taagtatcgg taatatacca tcatttgcac ggacaatgcg tgccagtgtt
     4801 ttagaaatta aacgcatgga atatgtagat gcagcacgta tcactggtga aaacacttgg
     4861 aatatcatat ggcgttatat tttaccgaat gcgattgcgc ctatgattgt acgtttttca
     4921 ttaaatatag gtgtggttgt attaacaaca agtagtttaa gtttcctagg acttggtgtt
     4981 gcacctgatg tagctgaatg gggcaacatt ttacgtaccg gtagtaacta cttggaaacg
     5041 cacagtaatt tagctattgt acctggtgtt tgtattatgt tcgtcgtttt agcatttaat
     5101 tttataggtg atgcagtgcg tgatgcacta gatccaagaa ttcattaaaa aggtagggat
     5161 agatgtgaag aaaatcatta gtatcgcaat tatagtttta gcgttggtat taagtggttg
     5221 tggtgtccct acgaaatcag aagtggctca aaagtcatcg aaagttgaag tgaaaggcga
     5281 gcgaccaaca atacatttcc taggacaagc aagttatgaa aatgatatga atatcgttaa
     5341 agatcaattg gaaaatgcag gatttaacgt gaagatgaat atccaaccag attatggtag
     5401 ctatcgtaca caacgtcaag ccggcaatta tgatatccaa attgatgact ggatgacagt
     5461 gtttggtgac ccgaactatg ctatgacggc attatttagt tctacaggat caaatagttt
     5521 attgaaagat aaacatgtag accagttgtt aaataaagct tctactcaaa atgaagcaga
     5581 tgttaaacaa acatataagc aaattgaaga tgaagttgta tttgataaag ggtatatggc
     5641 gcctttatat ggatcaaaaa agaatttagt atatgacaat aaagtgttag ataaaaatag
     5701 tgttggattg ccaaattcac gtgcattaat atggcaacaa tttgattaca acaatagtag
     5761 agaacgagat acgcggccac ttgtgatgac acaacaagat ggtgaaattc ctacattgga
     5821 tccaatacgt tcaattgcgc cgtcagtata ttcaattaat atgaatatgt acacaaggtt
     5881 attattatta gatgaaaatg atcatttaac aacgaaaggt tcgttaagtc atgattatgc
     5941 tgtgaataag gacaataaag cattttattt cttgttaaga gatgatgatt attttgcgaa
     6001 agtggtcaat ggacaagcac gtaatactgg agagcgtgta tcggctgaag atgttaagtt
     6061 ttctttagat agagcacgtg ataaaaagtc tgtgcctaac aataatactt acaatatgca
     6121 caaacatata aatgacatca agatattaaa agatgaggac atcgatcagt tgcgtaaaga
     6181 gaaagacaag gacgataaat caatctatga taagttgatt aaagcttata acgtcaaatc
     6241 gttaacgaca gatggtcaaa aagtaaataa taaagacggt atttatcaaa ttgttaaaat
     6301 tacgacagat caatcgatgc ctcgagaggt aaattactta acacactctt cggcaggcat
     6361 tttatctaaa aaatttgtta atcaagtaaa tcaagaatat ccaaaaggat atggggatag
     6421 cagtacaatt cctgcaaatt cagatgggaa aaatgcgctg tatgcaagtg gcgcatacat
     6481 tatgacacag aaaaatgcat atcaagcaac gtttcaacgt aatccaggat tcaacgaaac
     6541 agaaaaaggt agttatggac cagctaaaat taaaaatatt acattgaagt ttaatggtga
     6601 cccgaataat gcattgtcag aacttagaaa tcattcaatt gatatgttgg cagatgtgaa
     6661 tcaaaaacat tttgatttaa ttaagtcgga taaaaattta agcattattc gcaaaaatgg
     6721 acgcaagtca gtctttttaa tgctaaatat taaaaaaggt atatttaaga cgcatccaaa
     6781 cttgagacaa gcagtagtta atgcgataga tcaggatcaa tttattaagt tttatcgtgg
     6841 cgataaattt aaaattgcat caccgattac accacttgtc gatactggta acgagcaacg
     6901 tcaagattta gaaaaagtag aaaaagccat taatcaataa tgttttaaat atttaacaga
     6961 aagtaggagg atatagtatg gtcattaact taaatgacaa acagacaaaa acatctaaag
     7021 aagggttaat ttccgtatca catcctcttg cggctaaaat tggtaaggat gtattagatc
     7081 aaggtggcaa cgccatggat gcagtgattg caattcaact ggcattgaat gtggtagaac
     7141 catttgcatc aggtattggt ggtggcgggt atttgctata ttatgagcaa agtactggca
     7201 gtataactgc gtttgatgca cgtgagacag cacctgaaca tgtagacaaa caattttatc
     7261 tagatgattc aggcgaatat aaatcatttt ttgatatgac tacacatggt aaaactgtcg
     7321 ctgtgccagc aattccaaag ctgtttgatt atattcacaa gcgttatgct aaattgtcat
     7381 tggaagattt aattaatcct gcaattgaac tagccattga aggtcatgca gccaattggg
     7441 ctactgaaaa atattcgcgc cagcaacacg cacgattgac aaagtatcat gaaacggcac
     7501 aagtatttac gcatgaaaat caatattggc gtgaaggtga ttggattgta caacccgaat
     7561 taggtaagac atttcaaata ttaagagaac aagggtttaa tgcattttat aaaggtgaca
     7621 ttgcgaaaca attagtcaat gttgtcaaag catgtggtgg gacaatcact ttagaggatc
     7681 tagccaaata tgacattcag attaaagcgc caatcagtgc aacatttaaa gactatgaca
     7741 tttattcaat gggaccatct agttctggcg gtatcacggt aattcaaata ttgaagttat
     7801 tagaacatgt cgatttacca tctatgggtc caagatctgt tgattacttg catcatttga
     7861 tacaagcgat gcatttagca tatagtgatc gtgcgcaata cttggcggat gataattttc
     7921 atgaggtgcc tgtacagtca ttaattgatg atgattattt aaaagcacgc agtacgctca
     7981 ttgatagcaa taaagcaaat attgatatag agcatggtgt tgtgtctgat tgcattagtc
     8041 atacagatgt tgaagaaaat cataccgaaa caactcattt ttgtgtgatt gataaggaag
     8101 gtaatattgc ttcatttacg acatcaattg gtatgattta tggttcaggt atcacgattc
     8161 caggctacgg tgtgttattg aatacgacaa tggatggctt tgatgtagta gatggtggta
     8221 ttaacgaaat tgcaccatat aaacgaccac taagtaacat ggctccaacg attgtgatgt
     8281 atcacgggaa gccaatatta acagtaggtg cacctggtgc cataagtatc attgctagtg
     8341 ttgcgcaaac attaatcaat gtattagtgt ttggcatgga tattcagcag gctatagatg
     8401 aacctagaat ttatagtagc catcctaatc gcattgaatg ggagcctcaa ttttcacaat
     8461 ctacaatatt agcattgatt gcacatggac atgcaatgga acataaacca gatgcttata
     8521 ttggagatgt acatggacta caggttgacc caacaacgta tgaagcttcg ggtggaagtg
     8581 atgatactag agaaggcacc gtaatgggtg gcgaggtgtt agtgattaga aaacagccat
     8641 taccatatcg gcaaatgtat gatagtgacg gctttcgtct atatttcaat gatgtgcagt
     8701 tacctttatt ggcagatcaa gtgcgatgga tgcatgacaa atattgggtt gatgaaagtg
     8761 ttgttagaat cattttccct gaagttagtg cacatattga agatttaaga agttatgaaa
     8821 acgcaggaga aaattatata gatattgcct ggttagcacg gaaatatgct tatcaagtaa
     8881 cattgaagga tgacggttta tacttaactg atgatacata tacttcagtg aaacggaaca
     8941 caaatgcata ctatagatat gatcgagata gtatcacaag atagtttata cgcttgatat
     9001 gaagtttgta gtggatatga gcttttgttg aatgaaagga ttcgatttcg aactttagcg
     9061 tgacgcttga gtgtagtaat gttggaaatg ctatacgaaa cgctagtcac ctttgtaaaa
     9121 tatacaacgc ctcacaaatt cgtttttgat gtacatcaca atagttagcc taaaatctaa
     9181 tgtaatgtgg tttggtacag ttgaacgagt tatgtgaggt gtttttataa tataggattt
     9241 taatagatga tttggatgtt tctataatta cagcataagt attaatgttc acttatttta
     9301 ttataagtaa ggctttcttt ataaatgatt tggtcttttc caggacttga aaaataaaaa
     9361 taaagtttct gatcttgatg attattgcct tttaaatcac tcattccctt taattccacc
     9421 tttgttgatg cgtttttagg aatattatat ctacgtttta attgtttaac gtttggatta
     9481 tcgttcgaca acttaccaga taaattataa taatcagtgg taggatcatg tgtgactttc
     9541 aaatcattgc tatttaaaat gcttgttaaa tcaccacttt gaatcaaaaa ttgattgttt
     9601 tcgatttttt gtttcagcgc gggatctttt acgtcttttg tgaaaacgat tttattatta
     9661 actactttta ctggataact tttgtatgtc gagtcagtag cattttttct atcgtttgta
     9721 gttgtgtcat attcaccagt tattttatgt gtgttcttat ctacctttaa caacatacgg
     9781 tcttctttta aaagctcatc tgatccaaca actgaataag aggattctat ataccatgtg
     9841 tcttgatcat tattttcata atggggatta tcgtgaccat caatttcata aagcgtttct
     9901 aagtttttaa taggatacgt acttagtact tttttaagac catctttcaa atgaatttgt
     9961 tcccacttca ttgccaaaaa catatcgcca ctgactacaa ttgaaataat aataattgct
    10021 gctaagttta accagaaaat tttatgtgct ttcatacatt cccaccgttt ctcaaaatac
    10081 ttcattaaca ctataataat atattttgaa aaatatttac atcagtatta aagtgaatat
    10141 caaattttaa atttatgaaa ataatagata tttataaaaa gcggaaaaga gatacaataa
    10201 aaaactgcat gacgtttgag acgtcacaca gtgtaactaa aaatttaaaa agttgttgct
    10261 aatttttcag cattattaat actagttgct ttaatttctt cagtcttatg aggttcagca
    10321 ttgtgtcctt caataatgat tgtttcatat gatggcacac ctaagaatgt cataattgtt
    10381 cttaaataac ggtcacccat ttcaaaatca gcagcaggtc cttcagtata atatccacca
    10441 cgtgattgaa tgtgtaatac ttttttgtca gttagtaaac cttgtggtcc ttcagcagaa
    10501 tatttaaaag ttttacctgc aattgaaata gcatcaatat atgctttaac tacaggtggg
    10561 aaagaaaggt tccacatagg cgttacaaat acatatttat ctgcacttaa aaattcttct
    10621 aaaatgtcac tcaatcttga aactttcatt tgttcatcat cagttaacgt ttcgccatta
    10681 ctcatttttc cccaaccagt taatacatct ttgtcaataa ctggaatata agtttcaaat
    10741 aaatcaatat gtttcacttc atcatcagga tgttgttgtt gatatgtttc gataaatgct
    10801 ttaccagccg ccatagaatt tgataccagt tcattaaaag ggtgtgctgt aatatataat
    10861 acttttgcca tttgaaaatt ctcctctgtt tctgttattt tcttaagtat aattattata
    10921 ctcgatataa aatttaatat caatcaaaat attcaaatta ccatcatttt cttcatctat
    10981 atttggcagt actactaaag tatgagtgca tttaattatg aaatagttga tttagaatat
    11041 atacttaata cccaaaatat atgaaggatg gatgccacta tgacaaagcg accaaaacgt
    11101 attttggcaa caattatcat ttttctttca ctattattta cgattattta tatagatgac
    11161 attcaaaaat ggtttaacca atataccgat aaattgacac aaaatcataa aggacaagga
    11221 cactcaaaat gggaagactt ttttagaggg agtcggatta ctgagacttt tggtaaatat
    11281 caacattcac catttgatgg taagcattat ggcattgatt ttgcattgcc aaaaggtaca
    11341 ccaattaaag cgccgacgaa tggtaaagta acacgtatct ttaataatga attgggcggc
    11401 aaggtattac agattgccga agacaatgga gaatatcacc agtggtatct acacttagac
    11461 aaatataatg tcaaagtagg tgatcgagtc aaagcaggtg atattattgc atattcaggc
    11521 aatacaggta tacaaacgac aggcgcacat ttacattttc aaagaatgaa gggtggcgta
    11581 ggtaatgcat atgcagaaga tccaaaaccg tttatcgatc agttacctga tggggaacgt
    11641 agcctatatg atttgtagtt atagaagggt gcccgcagtc taaaaaatta agcaatcatt
    11701 gtgtgagtat gatacttaca taatggttgc ttttttcaat gaaaatcgta atgctaagtc
    11761 atacttgttt gatttagata ttacttaaaa tgtaagacaa ggttgttagc attggcagtg
    11821 aaatatcgca cataaaaaac attattgtca cactagaaaa tagttgtgca ctatatcaat
    11881 tttctgtata aaagtttaat tctgacagta atgtaaacgt ttacaattta tgattgacat
    11941 taataatgac tgaatatatg atttatgtaa gtatttgtgc aaacgttttc acaaagtgta
    12001 ttgcacaatc aaactgtaaa caaagtatgg gaggcataac atggcagaac taaagttaga
    12061 gcatattaaa aagacgtatg ataacaacaa tactgtagtg aaagatttta atctacatat
    12121 tactgacaaa gaattcattg tatttgttgg accatcggga tgtggtaaat caacaacatt
    12181 acgaatggtt gctggactag agtctatcac atctggagat ttttatattg atggggaacg
    12241 catgaacgat gttgaaccaa agaatagaga tattgcgatg gtatttcaaa actatgcatt
    12301 atatccacat atgactgttt ttgaaaatat ggcatttggg ctaaagctac gtaaagtaaa
    12361 taaaaaagag attgaacaaa aagttaatga agcagctgaa atattaggat taactgagta
    12421 tcttggtcgt aaaccaaaag cgttatctgg cggacagcgt caacgtgttg ctttgggcag
    12481 agctattgtt agggatgcga aagtcttttt aatggatgaa ccattatcga atcttgatgc
    12541 gaagcttcga gtacaaatgc gcacagaaat attgaaatta cataagcgac ttaatactac
    12601 gacaatttat gttacacatg atcaaactga agcattgacg atggctagtc gaattgttgt
    12661 tttgaaagat ggcgacatta tgcaagtcgg cacacctaga gaaatatatg atgcccctaa
    12721 ttgcatattt gtggcgcaat ttatcggctc accagcaatg aatatgttga atgctacagt
    12781 tgaaatggac ggattgaagg taggaacaca ccattttaaa ttacataata aaaaatttga
    12841 aaagttaaaa gctgctggct acttagacaa ggaaattatt ttaggtattc gagctgaaga
    12901 cattcatgaa gaaccaatat ttattcaaac ttctccagag acacaatttg aatctgaagt
    12961 agttgtatcc gaactgttag gttcagaaat tatggtacat agcacattcc aaggaatgga
    13021 attgatttct aaattagatt caagaactca agtgatggcg aacgacaaga ttacactagc
    13081 atttgatatg aataagtgtc acttttttga tgaaaaaaca ggaaatcgta tcgtctaagg
    13141 gggagtattc atgtctaaaa ttttaaaatg tatcacgtta gccgtggtaa tgttattaat
    13201 cgtaactgca tgtggcccta atcgttcgaa agaagatatt gataaagcat tgaataaaga
    13261 taattctaaa gacaagccta accaacttac gatgtgggtg gatggcgaca agcaaatggc
    13321 gttttataaa aaaattacgg atcaatatac taaaaaaact ggcatcaaag taaagcttgt
    13381 aaatattggt caaaatgatc aactagaaaa tatttcgcta gacgctcctg caggaaaagg
    13441 tccagatatc tttttcttag cacatgataa tactggaagt gcctatctac aaggcttagc
    13501 tgctgaaatc aaattatcaa aagatgagtt gaaaggtttc aataagcaag cacttaaagc
    13561 gatgaattat gacaataagc aactagcatt gccagctatc gttgaaacaa ccgcactttt
    13621 ttataataaa aaattagtga aaaatgcacc gcaaacgtta gaagaagttg aagctaatgc
    13681 tgccaaacta actgatagta aaaagaaaca atacggtatg ttatttgatg ctaaaaattt
    13741 ctattttaat tatccgtttt tattcggcaa tgatgattat attttcaaga aaaatggcag
    13801 tgaatatgat attcatcagc taggactaaa ttcaaaacat gtcgtcaaga atgctgaacg
    13861 attacaaaaa tggtacgaca aagggtatct tcctaaggca gcaacacatg atgtcatgat
    13921 tggtcttttt aaagaaggaa aagtaggaca atttgtcact ggaccgtgga acattaatga
    13981 atatcaagaa acgtttggta aagatttagg agtaacaaca ttacctacag atggtggcaa
    14041 acctatgaaa ccatttctag gtgtacgtgg ttggtattta tctgaatata gtaaacataa
    14101 gtattgggct aaagatttaa tgctgtatat cactagtaaa gatacattac aaaaatatac
    14161 agatgaaatg agcgaaatta ctggacgtgt tgacgtgaaa tcatctaatc caaatttaaa
    14221 agtgtttgaa aagcaagcac gtcatgctga accgatgcct aatattcctg aaatgcgaca
    14281 agtttgggaa ccgatgggca atgcaagcat atttatttca aatggtaaga atcctaaaca
    14341 agcgttagat gaggcgacga atgatataac gcaaaatatt aagattcttc atccatcaca
    14401 aaatgataag aaaggagatt agttatgacg aaacgtaacc ctaaattagc ggcattatta
    14461 tctgttatac ctggtttggg acagttttat aataaaagac ccattaaagg gacgatattt
    14521 tttatctttt tcatcagttt tatttctgtt ttttatagct ttttaaatat tggtttttgg
    14581 ggattgttca cattagggac agtacctaag ttagacgatt ctcgtgtctt acttgcacaa
    14641 ggtattattt ctatcttact cgttgctttc gcaatcatgc tatatatcat taatatttta
    14701 gatgcatatc gtaatgctga acgatttaat cgcaatgagg aaataaagga tccgaaggcg
    14761 cgtatggtgg caacatggga caagacgttc ccatacttac taatctcacc aggtacattc
    14821 ttattgatat ttgtagttgt atttccatta atatttatgt ttggagtagc atttacaaat
    14881 tacaatttat acaacgcgcc tccgagacac acattagaat gggttggttt agataacttt
    14941 aaaacgttat tcacaattgg cgtttggcgt aaaacatttt tcagtgttat tacttggaca
    15001 ttagtatgga cgcttgttgc aacgacactt caaattgcat tagggctgtt tttggcaatt
    15061 attgtaaatc accctgtcgt caaaggtaag aaatttatcc gtactgtgtt aatcctacct
    15121 tgggctgtac catcatttgt gacaatttta atatttgtag cgttatttaa tgatgaattt
    15181 ggtgcgataa ataatgatat tttgcaacct ttattaggtg tagcaccagc atggttaagt
    15241 gatccgtttt gggcaaaagt ggcattaatc ggcattcaag tatggcttgg attcccattt
    15301 gtctttgcac tgttcactgg agtactgcaa agtatttcat cagattggta cgaagcagca
    15361 gatatggatg gtgcgtctag ttggcaaaag tttagaaaca tcacattccc gcatgtcatt
    15421 tacgccacag cgccattgtt aattatgcaa tatgcaggta atttcaataa ttttaatctt
    15481 atttatctat ttaataaagg cggtccacca gtgtcagggc agaatgctgg tagtacagat
    15541 atcttgatat cttgggtgta taatctgaca tttgagttta acaacttcaa catgggtgca
    15601 gttgtgtcat taattattgg atttattgtt gctattgtcg catttattca attcagacgt
    15661 acaagtacgt ttaaagatga gggaggttta taagatgaca aagaagaaaa acatattaaa
    15721 agcaatcggt atttacagtt ttatagcgat gatgtttgtc atcattttat atccactact
    15781 gtggacattt ggcatttccc ttaatccagg tacgaacttg tatggtgcca aaatgatacc
    15841 agacaatgca acatttaaaa attatgcatt cttactattc gatgacagta gtcaatacct
    15901 gacttggtat aaaaatacgc ttatcgtagc atctgcaaat gcactgttta gtgtgatatt
    15961 tgtcacgtta acagcatatg ctttttctag atatcgcttt gttggtcgta aatacgggct
    16021 gattacattt ttgattttac aaatgttccc tgtattaatg gcaatggtcg caatctatat
    16081 tttgctaaat acaattggat tattagattc tttatttgga ctaacactgg tatatattgg
    16141 tggatcaata ccgatgaatg cctttttagt gaaaggttac ttcgatacga ttccaaaaga
    16201 acttgatgaa tctgccaaaa ttgatggtgc agggcatatg cgtattttct tacaaattat
    16261 gcttccatta gctaagccga ttttagcagt tgttgctttg ttcaatttta tggggccatt
    16321 tatggacttt atattaccta aaatactatt aagaagtcct gaaaaattca cattagcagt
    16381 tggattgttc aactttatta atgataagta tgcaaataat ttcacagtgt ttgcagcagg
    16441 ggcaattatg attgcagtac ctatagcaat cgtattcttg ttcttgcaac gctatttagt
    16501 atcaggttta acaacaggtg cgacaaaagg ttagtttgaa attaggagtg gggcagaatt
    16561 gataaagaac cactaatgac gataaagatt aaaaggagga cgttatgatg acgattaaag
    16621 ttggaatcat tgggtgtggt ggtattgcga atggcaagca catgccaagt ttacaaaaag
    16681 ttgaaaatgt tgaaatgatc gcattttgtg acgtagacat ttcgaaagca gcgagtgcgg
    16741 cagaagcata cggaactgac aatgcaaagg tttatgatga ttacaaagca ttgttaaaag
    16801 atgacacgat tgatgttatc catgtttgta cgccaaatga ctcgcattgt gaaattactg
    16861 tagcagggtt gcatgctggt aaacatgtga tgtgtgaaaa accaatggct aaaacgacag
    16921 cagaagctca aaaaatgata gatacagcta aatcaacagg taaaaaatta acaataggtt
    16981 atcaaaatcg tttccgagca gatagtcaat ttttacatca agcagcgcaa cgtggcgact
    17041 taggagacat ttacttcgga aaggcacatg ccattcgtcg tcgagcagta ccaacatggg
    17101 gtgtctttct agacgaagaa gctcaaggtg gaggaccatt aatcgatatc ggtacacacg
    17161 ctttagattt aacgttatgg atgatggata attatgaacc agaatcagtg atgggttcaa
    17221 cattccataa attaaataaa cagcatcatg cggcaaacgc ttggggttca tggaatccag
    17281 atgaatttac agttgaagat tctgcgtttg gatttattaa aatgaagaat ggagcgacga
    17341 tcattttaga atccgcttgg gcgattaatt ctttagaagt ggatgaggca aaatgttcat
    17401 tatcaggaac taaagcaggt gctgatatga aagatggtct acgtattcat ggtgaagaca
    17461 tgggtacact ttataccaaa cacgttgaat tggaaaacaa aggcgtcgac ttttatgaag
    17521 gtaatgaagt ggatgaagct gaagaagaag caaaagcttg gattgatgca gttgtaaatg
    17581 atactgaacc agttgtgaaa ccggaacaag caatggtagt tacaaaaatt cttgaagcga
    17641 tttatcagtc tgcaaaatca ggcaaagcaa tttactttga ataacatcat acggtaagga
    17701 ggcacatcat gacaaaatta aaagttggtg tgataggtgt tggtggtatt gcacaagacc
    17761 gtcatattcc agcattgctg aaactcaaag acacagtctc attagttgca gtacaagata
    17821 ttaatacagt gcagatgatt gatgttgcga agcgctttaa tatacctcat gcagttgaga
    17881 cacctagcga gctgtttaaa cttgttgatg cggtggtcat ttgtacacct aataaattcc
    17941 atgctgatct ttctatagaa gcattgaacc atggtgtcca tgtattgtgt gaaaagccaa
    18001 tggcgatgac gacggaagag tgtgatcgca tgattgaagc ggctaataaa aatcacaaat
    18061 tattaactgt cgcatatcat tatcgtcaca cagatgtggc aattactgct aaaaaagcaa
    18121 ttgaatcagg tgtggttggt aaacctttag tagcacgtgt acaagcgatg cgtaggcgta
    18181 aagtgcctgg ctggggtgtt tttaccaata aagcgttgca aggtggcggt agtttaatcg
    18241 attatggttg ccacttgtta gacttatctt tgtggctact aggtaaagat atggtgccgc
    18301 atgaagtgct aggaaaaaca tataatcaat tgagcaaaca accgaatcaa attaatgatt
    18361 ggggaacatt tgatcatact aaatttgatg tcgatgatca tgttactagt tatatgacat
    18421 ttgccaatcg agcaagcatg cagtttgaat gttcgtggtc tgcaaatatc aaagaagata
    18481 aggttcacgt tagtttatca ggagaagatg gcggtatcaa tttatttcca tttgaaatat
    18541 atgagccccg ctttggaact atttttgaaa gcaaagctaa tgttgagcat aacgaagaca
    18601 ttgctggtga gagacaggcg cgtaactttg tcaatgcgtg tttagggata gaagagattg
    18661 tggtgaaacc ggaagaagca cgcaatgtaa atgcccttat agaagcgatt tatcgtagcg
    18721 atcttgataa caagagcata caactttaat gattatcata tatgatacaa aattctcaat
    18781 ataaaaagaa ggagtgcttt tcaatgaaaa taggtgtatt ttcagtatta ttttacgata
    18841 aaaattttga agatatgtta gattatgtct cagaatctgg attggatatg attgaagttg
    18901 gaacaggtgg taacccagga gataaatttt gtaagttaga tgagttgtta gaaaatgaag
    18961 acaagcgcca agcatttatg aagtcaatca cagacagagg cttacaaata agtggtttca
    19021 gttgtcataa caatccaatt tctccagatc cgatagaagc gaaagaagcc gatgaaacgt
    19081 tacgtaaaac aatccgttta gcaaatctat tagacgtgcc agttgttaat acattttctg
    19141 gcattgcagg atcagatgat accgctaaaa agcctaattg gcctgttaca ccttggccaa
    19201 cagcctactc tgaaatttat gattatcagt ggaatgaaaa gttgatacca tattggcaag
    19261 atttagctga gtttgcaaaa gagcaagatg taaaaattgc catagagttg catgcaggat
    19321 ttttagtgca tacaccatat acaatgttga agttacgtga ggctacaaat gaatatatcg
    19381 gtgctaactt agatcctagt catctatggt ggcaaggtat tgacccaatt gctgcgattc
    19441 gcatattagg ccaagcaaat gcaattcatc acttccatgc taaagatacg tatattaatc
    19501 aagaaaatgt aaatatgtat ggtctaactg atatgcaacc atatggtaac gttgcgacaa
    19561 gagcatggac attccgtaca gttggttatg gacatagtcc atatgtatgg gcagatatca
    19621 taagtcaact tattattaat ggatatgatt atgtattaag tattgaacat gaagatccta
    19681 ttatgtcagt agaagaaggt ttccaaaaag cttgtcaaac tttgaaatct gttaatattt
    19741 acgacaagcc agcagacatg tggtgggcat aatacgaact cgaggttagt ctgaagtttg
    19801 tctgaagtaa gactggtggc agtgttgaat aaatgcatat gtcgccaagc cattgccaaa
    19861 aatttcacac cttaaatcaa gtcattgttt gtaaagaagg tgtactttat ataagtatat
    19921 agcgatggtc atacccattc acagtaacaa tcctcaccat tgaaaagagt atataacctt
    19981 ttcaatagtg aggtatatga taataaaaaa gcctgttgtc acaatggtca tagacacgac
    20041 atactttaaa ggtttctgaa tataatattt cagaatgcac tttaaagatg gacgtcgatg
    20101 tagactaaag tgatgacagg ctttcatctt tttaaatatt cattaatttc tcttcttgtt
    20161 taatacgtac atataagaaa tacgcatacg gtactaataa aatagttgta tatgttgcgt
    20221 gtgttaataa taatacaccg attaattcag gaatgatgtt taagaagtaa tttgggtgtt
    20281 ttgtaatttt atataatcca gatttaataa taggatggtt aggtaaaatg aataatttta
    20341 atgtccaaat accacctaaa gttttaataa ccataaataa catgatatta gcaaagatta
    20401 atataactaa gccaatacca tttgcaaagc taaatgtatc tttattaata aatgcctcta
    20461 caccagccaa tacataaatt aaaacgtgtg ttattgctaa aaacttcgaa tttttaacgc
    20521 catattcaac tgcaccgtct gcttttaatt gttttgagtg attaatagat atctttaagc
    20581 tgacaagtct gatacagaaa aagataagta atatagatag aatcatgatg tcctccgtca
    20641 ttatgtcata tgtataagcg ttgattttga caacataaag tattttatag ataaagcttg
    20701 tcaaatacta ttaactattt attaatttta gtacataaat atgtttctaa gtatgtgttt
    20761 atgttcagta ttttggataa tttaataatt ttaaggatat taagcgctta caccgacgtg
    20821 atatatttgg cttaacgaaa atgattgagg tgacagagat gaactttttt gatatccata
    20881 agattccgaa caaaggcatt ccattatcgg tacaacgtaa attatggctt agaaacttca
    20941 tgcaagcttt cttcgtagtg ttctttgttt atatggctat gtatttaatt cgaaacaact
    21001 ttaaggcggc acaaccgttt ttaaaagagg aaattggatt atctacatta gaacttggtt
    21061 atatcggatt agcatttagt atcacgtacg gtttaggaaa aacattactt ggatattttg
    21121 tcgatggacg taacacaaaa cgtattatct cgttcttact tatcttatct gcgattacag
    21181 ttttaattat gggatttgtt ttaagttact ttggttctgt aatgggatta ttaattgtac
    21241 tttggggact taacggggtg ttccaatcag ttggtggacc tgcaagttat tcaacgattt
    21301 caagatgggc gccaagaacg aaacgtggcc gatacttagg attctggaat acatcacata
    21361 atatcggtgg tgccatagca ggtggtgttg cactttgggg tgctaatgta ttcttccatg
    21421 gaaatgttat agggatgttc attttcccat cggtgattgc attacttatt ggtatcgcaa
    21481 cattatttat cggaaaagat gatccggaag aattaggatg gaatcgtgct gaagaaattt
    21541 gggaagagcc ggtcgataaa gaaaatattg attctcaagg tatgacgaaa tgggagatct
    21601 ttaaaaaata tatcctggga aatcctgtta tatggattct atgtgtttca aacgtctttg
    21661 tatacattgt acgaatcggt attgataact gggcaccgtt atatgtgtca gagcatttac
    21721 actttagtaa aggcgatgca gttaatacga tattctactt tgaaattggt gcattagttg
    21781 caagtttatt atggggctac gtatcagact tattaaaagg tcgtcgtgca attgtagcta
    21841 ttggctgtat gtttatgatt acatttgttg tcttattcta cacaaatgct acaagtgtca
    21901 tgatggttaa catttcattg tttgcattag gtgcgttaat ctttggtccg caattattaa
    21961 ttggtgtatc attgactggt tttgttccta aaaatgccat cagtgtagca aacggaatga
    22021 caggttcatt cgcgtatcta ttcggtgact caatggcgaa agttggtttg gcggctattg
    22081 ctgatccaac acgtaacggt ttaaacatct ttggatatac attaagtgga tggacagatg
    22141 ttttcatcgt cttctatgtt gcattattcc taggcatgat tctattagga atcgttgctt
    22201 tctatgaaga aaagaaaatt agaagtttaa aaatttaata taaatcggat taaaagtatc
    22261 gccaatctat tgcaatatag ttggcaatcc tgccccgacg gcatgtgcgt gaagagatga
    22321 aagatactgc ttctaccctt gcaaatatat catctctatg tctcggggca gatcataatt
    22381 ccctgttatg aagtatcctt atttgcccga cttagggtga ctcaatgaat ttactcctta
    22441 caataaagac atatagcggt gtcaatattg tagggagtat tgttttatat ttaaactctc
    22501 taaaaagcgg actgaaagaa aagtgaaaac ttctctatca gtccgctttt tcatagaaca
    22561 aaatggaggc gccataatca ttagttatgt gctaatctat tttgcttgct tacaataatc
    22621 acttggcgac atttgtaaat attttttaaa atgatagcta aacattttat actctgaaaa
    22681 gcctactttg tctgcaattt catagtgttt gtaatgtcga tctaacaatt gcagagattg
    22741 taaaatacga tagcgattta aataatcgac aattgtaata ccaacatgat ctttaaatgt
    22801 tcgcatcgca tacgattcac taacatcgat atgttgaatt aaatctgaaa cagtcacttt
    22861 cgtttgataa gattgcttaa tttgatccac aatctggttt acataataat catcgtattc
    22921 tacttttaat agtggttgga aggcatcatg acaagatgct aagctacggc cgttctgtga
    22981 ttgttgctct aataaggtac ggacaagtct tcctaaaata acttctaatt gtgcatggtc
    23041 tactggtttt aataaataat caagaacatg atgttgaatg ccggctttca tatattcaaa
    23101 gtcatcgtaa ctcgataata tgatgacatt acaatctaga tgcgcaatat cattgagtaa
    23161 atcgacgcca tttttacgtg gcatacgaat atcagtaatt actaattctg gctgatgttg
    23221 ttgaattagt gataatgctt caacaccatc tttagcagtg tatattgtat tgaaatgata
    23281 gtctccccaa ggaatgattt gctttaatcc ttctcgaata attcgttcat catcacaaat
    23341 aactacctta aacatctaca ttcccccttg aaagtggtat tttataacaa attaacgtac
    23401 cttgattacg ctttgaaaaa atatggagtc gtgcatgtga accatattga atcattgctt
    23461 tattgtgtaa atgatttaat cccaaatgct tagtatcaaa tacatcatta ttaagagatt
    23521 ggcgtacata ttgcaggcga gatgacgaca tcccgatacc attgtcgcaa actaaaacat
    23581 gtaaattctg acgtgccaat gtcaggcgta tagtaatgtc caatgactca gtatctctac
    23641 catgtttaat agcattttct atgagtggct gaagcatcat tttaccaatt gtctggtgac
    23701 gcgcttcttc agaactttca atatggagct taatcatgtc atcaaaacgg atgttttgta
    23761 ttgcaacata ctgttcaatg tagttcaact cttcgtttaa ttccactgta tgtgagtttg
    23821 tacgtaatga gtaacgtaac atttgcgata attgttggac cacagtttgt gctaatttcg
    23881 gagataacgt aattaaatat tgtattgttt gcatcgtatt gaataggaaa tgaggctgga
    23941 attggcgttc tatttccttt aactgaatat cacgcaagcg acgttctgta tgctcgatag
    24001 aatggatcag ttgctcattt gattcaaata aatcgtaaat ataattatta atttcttcta
    24061 gttcactgtt gttttttaaa ggcgtatatg tacctagatg acgatttttg gcatagtaaa
    24121 ttttttgaat aatcgtttcg atatcttttg tttgtcgttt agccatatta tctgcgctaa
    24181 tgaaaccaaa tattactagt aaaacaagaa ctacggccat aacaattaac aacgtgatac
    24241 catcttcaat gttttcatgt atatctttat aaataatgag acgatggtca gcatggttta
    24301 attttacaga ttcattcata aatccgaatt gttgtggtct atacttttca cctatagtaa
    24361 aacggtcatc gttggcgtat aaaatattgt catattgatc aacgataagt gcgaattgtc
    24421 ggttatcttt cttaatttca cttaaacgtg gggtgttagc catataaatt ttaagcatat
    24481 atgtactatt tttgaattta agctgatgcg ttgaaaataa atacatattt ttagtgttta
    24541 aatgttcata attattggtt ataaactgat ttggtccaga taattcataa taaagtgttg
    24601 cgggctgttg gtgtattaat tttaataatt cacgttttgt agcggtcaca tcatgatgat
    24661 ttgttaaatc gagctcttga aacgaattat tatgctgtgt aataaatgtc tgaatctgct
    24721 tttcagtatg atgtaaagat gactgacttt catcaacatg ttgatgaatc gtacgatgct
    24781 caatccaaat atagatggca tagaagctta ctagtccaat aataatgact aaaaatactg
    24841 gaaaaatagt agacgcaaat aacgatcgtc ttaattgatg tctataaggt ttgtatgccg
    24901 tcattgaatc atctccaaaa atttatgatg tggaatatcc ggtaatttag atttcggtat
    24961 taaaggtatg ttcttaagat tttcgataga ctgatcgctt tgttcactaa catcctttcg
    25021 aattgacttg gcatcgaact ctgcaactaa tcgttgttgt actgagcggc ttgttaaata
    25081 ttgcactaac tttttacgct taggatgagg gtgtgcattt ttaactaaag caataccatc
    25141 aacatttaac attgttcctt caattggata aacgattgat acaggataac ctttgttttt
    25201 ccatgtgcgt gcatcttgtt cgtagcttag acctgcgtaa tatttacctt ttgcaacatc
    25261 ttcaatgact ttagacgtct ttgacagttg catcgcatgg ttttggaatt gatgcacatc
    25321 acttactcga tgatgcatgc tataaatagc acgcatatgt tgatagcctg tcgttgttgt
    25381 atttggattt gagtacgcaa ttttaccttt aagtataggt tgtaataaat cttgataacc
    25441 tcgaatctta atatctcctt gtaaatctga attcactact ataactgttg gcattaatag
    25501 aaaactagta acatatttat tgttcgagcg ataatcctct aattgctgtg ttacagatgt
    25561 atcttgatag ggaacaaaat cttctggatg atcaattgtt tctgacaaca caccacccat
    25621 aaagacatca ccacgctccg aaaaatcttc gttatgcaag tttgaaagca gtacttgagt
    25681 agatccgtgt ttaatttcaa ttttgacatg ctcttgtttt tcaaattcat ttaaaattgg
    25741 acgaatcaag tttgattgat acggagaata aactgttaat acatttttat cggattcaga
    25801 gtgacgcgta ttagcgcatg ctgataaaaa aatgagaaat aatagcaaga tataaatttt
    25861 tgatttcatg atatcccatc aattctatgt atattttaat acaataattt tagcaataaa
    25921 tgacgcataa gtaatgttaa atatttagaa atgtttatag atgacttgtt aagacgttgc
    25981 aaatgttgtg atagcacaaa atttttgttt gtcaagacga tttaccgagg ctgtaaaatc
    26041 aaactgttat attttatttg tagctgttat ataaaaatcg gcaagatatt gaacggttca
    26101 aaagtgaatt tttacgtcaa taaaagtatt taatccagtc tcttcatata taaaagtaaa
    26161 tctttctaag tgttgattta acgcttatca acaatcattt tttataaaca aatatatact
    26221 cctaaattaa cttttaaagc aatgaaaata gtgaacatta taactgttgt gtaacagaat
    26281 gcaattagca tattactgtt acacaaatta gtacagtttc tatgttttga catacatttg
    26341 atgaaaattg tacataattt atgtgaaaaa aatcacaaca aacatgctac aatgactatg
    26401 aaaacgttaa catagcattt caaattcaca acattataca gatggaggcg tttagtatgt
    26461 tagaaacaaa taaaaatcat gcaacagctt ggcaaggatt taaaaatgga agatggaaca
    26521 gacacgtaga tgtaagagag tttatccaat taaactacac tctttatgaa ggtaatgatt
    26581 catttttagc aggaccaaca gaagcaactt ctaaactttg ggaacaagta atgcagttat
    26641 cgaaagaaga acgtgaacgt ggcggcatgt gggatatgga cacgaaagta gcttcaacaa
    26701 tcacatctca tgatgctggt tatttagaca aagatttaga aacaattgta ggtgtacaaa
    26761 ctgaaaagcc attcaaacgt tcaatgcaac cattcggtgg tattcgtatg gcgaaagcag
    26821 cttgtgaagc ttacggttac gaattagacg aagaaactga aaaaatcttt acagattatc
    26881 gtaaaacaca taaccaaggt gtattcgatg catattctag agaaatgttg aactgccgta
    26941 aagcaggtgt aatcactggt ttacctgatg catacggacg tggacgtatt atcggtgact
    27001 atcgtcgtgt agctttatat ggtgtagatt tcttaatgga agaaaaaatg cacgacttca
    27061 acacgatgtc tacagaaatg tcagaagatg taattcgttt acgtgaagaa ttatcagaac
    27121 aatatcgtgc attaaaagaa ttaaaagaac ttggacaaaa atatggtttc gatttaagcc
    27181 gtccagcaga aaacttcaaa gaagcagttc aatggttata cttagcatac cttgctgcaa
    27241 ttaaagaaca aaacggtgca gcaatgagtt taggtcgtac atcaacattc ttagatatct
    27301 atgctgaacg tgaccttaaa gcaggcgtta ttactgaaag cgaagttcaa gaaattattg
    27361 accacttcat catgaaatta cgtattgtta aatttgctcg tacacctgat tacaatgaat
    27421 tattctctgg agacccaact tgggtaactg aatctatcgg tggtgtaggt attgacggac
    27481 gtccacttgt tacgaaaaac tcattccgtt tcttacactc attagataac ttaggtccag
    27541 ctccagaacc aaacttaaca gtattatggt cagtacgttt acctgacaac ttcaaaacat
    27601 actgtgcaaa aatgagtatt aaaacaagtt ctatccaata tgaaaatgat gacattatgc
    27661 gtgaaagcta tggcgatgac tatggtatcg catgttgtgt atcagcgatg acaattggta
    27721 aacaaatgca attcttcggt gcacgtgcga acttagctaa aacattactt tacgctatca
    27781 atggtggtaa agatgaaaaa tctggtgcac aagttggtcc aaacttcgaa ggtattaaca
    27841 gcgaagtatt agaatatgac gaagtattca agaaatttga tcaaatgatg gattggctag
    27901 caggtgttta cattaactca ttaaatgtta ttcactacat gcacgataaa tacagctatg
    27961 aacgtattga aatggcatta catgatacag aaattgtacg tacaatggca acaggtatcg
    28021 ctggtttatc agtagcagct gactcattat ctgcaattaa atatgcacaa gttaaaccaa
    28081 ttcgtaacga agaaggtctt gtagtagact ttgaaatcga aggcgacttc cctaaatacg
    28141 gtaacaatga cgaccgtgta gatgatattg cagttgattt agtagaacgc ttcatgacta
    28201 aattacgtag tcataaaaca tatcgtgatt cagaacatac aatgagtgta ttaacaatta
    28261 cttcaaatgt tgtatacggt aagaaaactg gtaacacacc agacggacgt aaagctggcg
    28321 aaccatttgc tccaggtgca aacccaatgc atggccgtga ccaaaaaggt gcattatctt
    28381 cattaagttc tgtagctaag atcccttacg attgctgtaa agatggtatt tcaaatacat
    28441 tcagtatcgt accaaaatca ttaggtaaag aaccagaaga tcaaaaccgt aacttaacta
    28501 gtatgttaga tggttacgca atgcaatgtg gtcaccactt aaatattaac gtatttaacc
    28561 gtgaaacatt aatagatgca atggaacatc cagaagaata tccacagtta acaatccgtg
    28621 tatctggtta cgctgttaac ttcattaaat taacacgtga acaacaatta gatgtaattt
    28681 ctcgtacatt ccatgaaagt atgtaacaaa atttaaggtg ggagcactat gcttaaggga
    28741 cacttacatt ctgtcgaaag tttaggtact gtcgatggac cgggattaag atatatatta
    28801 tttacacaag gatgcttact tagatgcttg tattgccaca atccagatac ttggaaaatt
    28861 agtgagccat caagagaagt cacagttgat gaaatggtga atgaaatatt accatacaaa
    28921 ccatactttg atgcatcggg tggcggtgta acagtcagtg gtggcgaacc attgttacaa
    28981 atgccattct tagaaaaatt atttgcagaa ttaaaagaaa atggtgtgca cacttgctta
    29041 gacacatcgg ctggatgtgc taatgataca aaagcatttc aaaggcattt tgaagaatta
    29101 caaaaacata cagacttgat attattagat ataaaacata ttgataatga caaacatatt
    29161 agattgacag gaaagcctaa tacacacatc cttaacttcg cgcgcaaact gtcagatatg
    29221 aaacaacctg tatggattcg acatgtcctt gtgcctggtt attctgatga taaagacgat
    29281 ttaattaaac taggggaatt tattaattct cttgataacg tcgaaaagtt tgaaattctg
    29341 ccatatcatc agttaggtgt tcataagtgg aaaacattgg gcattgcata tgaattagaa
    29401 gatgtcgaag cgcccgatga tgaagctgtt aaagcagcct accgttatgt taacttcaaa
    29461 gggaaaattc ccgttgaatt ataaatacaa ttcagaccga aaagaaagca tatgcaactt
    29521 caagagtgaa ggggcatatg cttctttttc aattgagtat tgagtattag caagacgtag
    29581 taagtatatg agacaacttc tacaatggtt gaaggaagac gtttttgtaa gtagctatgc
    29641 tgataaagaa tgtgatgtct tgttaaaggt ggggttccaa tatcatcatt tagctgatgt
    29701 tgaatgggtt attatttgct acttgcatat gaatatgagt cttttcaaat ttttattgac
    29761 cctgagtaat gaaaaatatt aagatgaaac ttaatattaa agcaatgcgg agcgtgatta
    29821 tgaagagaat tagtaaagat atatgggcag tatttaaatt actgtatcaa aataaagggc
    29881 gttttagcat taatgcctta ctattgcagt taatcatgat ttttattagt agtacatact
    29941 taattttact atttaatatg atgttaaaag tagctgggca aagccaactt acgattaaca
    30001 attggacgga aatcgttagt catcccgcca gtgtgatact tcttattata ttcatattaa
    30061 gtgttgcctt tctgatttat gtagagtttt cattgttagt ttatatggtt tatgccggct
    30121 ttgatcgaca gattattaca tttaaatcca tttttaaaaa tgcctttgta aatgtgcgta
    30181 aactcatagg tgtaccagtt attttctttg tcatttattt aatgttaatg atacccattg
    30241 ccaacctagg actaagttca gtattaacaa aaaatattta catacctaaa tttttaacgg
    30301 aagaacttat gaaaacgacg aaaggtataa tcatttacgg tacctttatg attgctgtat
    30361 ttatattaaa ttttaaatta atatttactc taccgttaac gattttaaac cgccagtcgt
    30421 tatttaaaaa tatgagacta agttggcaaa ttacgaagcg aaataagttt cggcttgtta
    30481 tagaaatagt tatattagaa ctcatcattg gtgcgatttt aacattaatt atttcaggag
    30541 caacatatct tgctatttgt gtagatgaag aaggagataa gtttttagtc tcatcaattt
    30601 tatttgttgt attgaaaagc gcattgttct tctattattt atttacgaaa ttatcattaa
    30661 tcagtgtgtt agtactgcac ttaaaacaag agaatgtatt agaccaaccg ggcttagaat
    30721 ttaaatatcc aaaaccgaaa cggaagtcta ggttctttat aatttcaatg gtgcttgcag
    30781 tgacatgttt tatcggttat aacatgtact tactttacaa taatactatc aatacaaata
    30841 tctccattat tggccatcgt ggtttcgaag ataaaggcgt tgaaaattct attccgtcat
    30901 tgaaagctgc tgcaaaagcg aatgtcgaat acgttgagtt agatacaatt atgacgaaag
    30961 ataaacaatt tgttgttagt catgataaca atttgaaacg tttaacaggt gttaataaaa
    31021 atatttctga atctaatttc aaagatatcg tcggtttgaa aatgcgtcaa aatggacatg
    31081 aagcaaaatt tgtatcctta gacgaattta ttgaaacggc taaacaatca aatgtgaagc
    31141 tactagtaga gttaaagcca catggtaaag aaccagcaga ttatacacaa cgtgttattg
    31201 atattttgaa aaagcatggt gttgaacatc aatatcgtgt gatgtctttg gattatgatg
    31261 tgatgactaa gttgaaaaaa gaagcgccat atctcaagtg tggttatatc attccgttgc
    31321 agtttggtca ttttaaagaa acatcattag atttctttgt catcgaagat ttttcttatt
    31381 cgccaagact tgttaatcaa gcgcacttgg aaaataaaga agtctatact tggactatta
    31441 acggcgaaga agatttaacg aaatacttac aaaccaatgt tgatggtatt atcacagatg
    31501 acccagcatt agctgatcag attaaagaag aaaagaaaga cgaaacatac ttcgatcgtt
    31561 ctataagaat tttgtttgaa taatataaac aaagacctct aaagttatca agatgatacc
    31621 ttcagaggtc tttttaatgt tgccatctat gggataggca atcgtttcat tcgtttatat
    31681 tcatatgaca agtatttgta tggcaatttg gcgtcacaaa cacttacatg atttattggt
    31741 gaattattaa ttgttttgtg aatgcaaagg gttagaaatt gaattgtaaa tactttctaa
    31801 tctttgtttc gctttagtca tttgatccaa atttttagtg cgtatagcgg attttgcaat
    31861 atagtgcgca gctaaaatat cgcgtttttg aaacgcatct aaatttaggt acgataattt
    31921 atttaagtca gtgtttgcta ttaattcatg taattgatct acaagcgctt gatgttgata
    31981 cgtatgtgat gtagtttcag atttgcttgc taatttaata ccagtcgtat caaggagcgc
    32041 cgctttaata ccagcaacta aatatgtttt gattttcatt tgtgttgtca tgctttgtta
    32101 ctcctttgat gtacattaat caaaaaaatt atacactatt gtatattgca aagctaatta
    32161 actataacaa aaagatagtt aatgctttgt ttattctagt taatatatag ttaatgtctt
    32221 ttaatatttt gtttctttaa tgtagattgg gcaattacat tttggaggaa ttaaaaaatt
    32281 atgaaaaagc aaataatttc gctaggcgca ttagcagttg catctagctt atttacatgg
    32341 gataacaaag cagatgcgat agtaacaaag gattatagtg ggaaatcaca agttaatgct
    32401 gggagtaaaa atgggacatt aatagatagc agatatttaa attcagctct atattatttg
    32461 gaagactata taatttatgc tataggatta actaataaat atgaatatgg agataatatt
    32521 tataaagaag ctaaagatag gttgttggaa aaggtattaa gggaagatca atatcttttg
    32581 gagagaaaga aatctcaata tgaagattat aaacaatggt atgcaaatta taaaaaagaa
    32641 aatcctcgta cagatttaaa aatggctaat tttcataaat ataatttaga agaactttcg
    32701 atgaaagaat acaatgaact acaggatgca ttaaagagag cactggatga ttttcacaga
    32761 gaagttaaag atattaagga taagaattca gacttgaaaa cttttaatgc agcagaagaa
    32821 gataaagcaa ctaaggaagt atacgatctc gtatctgaaa ttgatacatt agttgtatca
    32881 tattatggtg ataaggatta tggggagcac gcgaaagagt tacgagcaaa actggactta
    32941 atccttggag atacagacaa tccacataaa attacaaatg aacgtattaa aaaagaaatg
    33001 attgatgact taaattcaat tattgatgat ttctttatgg aaactaaaca aaatagaccg
    33061 aaatctataa cgaaatataa tcctacaaca cataactata aaacaaatag tgataataaa
    33121 cctaattttg ataaattagt tgaagaaacg aaaaaagcag ttaaagaagc agatgattct
    33181 tggaaaaaga aaactgtcaa aaaatacgga gaaactgaaa caaaatcgcc agtagtaaaa
    33241 gaagagaaga aagttgaaga acctcaagca cctaaagttg ataaccaaca agaggttaaa
    33301 actacggctg gtaaagctga agaaacaaca caaccagttg cacaaccatt agttaaaatt
    33361 ccacagggca caattacagg tgaaattgta aaaggtccgg aatatccaac gatggaaaat
    33421 aaaacggtac aaggtgaaat cgttcaaggt cccgattttc taacaatgga acaaagcggc
    33481 ccatcattaa gcaataatta tacaaaccca ccgttaacga accctatttt agaaggtctt
    33541 gaaggtagct catctaaact tgaaataaaa ccacaaggta ctgaatcaac gttaaaaggt
    33601 actcaaggag aatcaagtga tattgaagtt aaacctcaag caactgaaac aacagaagct
    33661 tctcaatatg gtccgagacc gcaatttaac aaaacaccta aatatgttaa atatagagat
    33721 gctggtacag gtatccgtga atacaacgat ggaacatttg gatatgaagc gagaccaaga
    33781 ttcaataagc catcagaaac aaatgcatat aacgtaacaa cacatgcaaa cggccaagta
    33841 tcatacggag ctcgtccgac acaaaacaag ccaagcaaaa caaacgcata taacgtaaca
    33901 acacatggaa acggccaagt atcatatggc gctcgcccaa cacaaaacaa gccaagcaaa
    33961 acaaatgcat acaacgtaac aacacatgca aacggtcaag tgtcatacgg agctcgcccg
    34021 acatacaaga agccaagtaa aacaaatgca tacaatgtaa caacacatgc agatggtact
    34081 gcgacatatg ggcctagagt aacaaaataa gtttgtaact ctatccaaag acatacagtc
    34141 aatacaaaac attacgtatc tttacaacag taatcatgca ttctatgatg cttctaactg
    34201 aattaaagca tcgaacaatc ggaagcatat ttctaaatta tttattcatt atagtcttaa
    34261 acataacatg acctaatata ttactaacct attaaaataa accacgcaca tctaagtgat
    34321 atacgacaat cacagcaata ataattgctt tagaaagtcg tgccgaactg gaacttacaa
    34381 gtctagttcg aacacacact gatgtgagtg gttttcttta ttttaaacat gaacaatcag
    34441 ataagttact agcattagca aatattatta aatcaaaggg cttcgattca taaaatttaa
    34501 aacaatgatt aaaattagac gtgtaaatgt taaattctaa aacggaaata accaccatcc
    34561 cattaaacca cttttttgtt caatcactat atttcacaca gcttcattaa taaaacgaaa
    34621 ttgcttcaac ccgcttcaac ttcaactggc ttcaacttca gcctacttca ttcaataaca
    34681 aaacgaatcc gcttcatcca aaatcaacca ttctaacgca catattcaaa tatagcagct
    34741 gcacccatgc cgacaccaat acacatcgta accatgccgt aacggctatc gggacgtcta
    34801 cccatttcat taagtaaacg cgcggttaac attgcgcctg tagcacctaa tggatgacct
    34861 aaagcaatag cgccaccatt cacattcgta cgtgatatat ctagacctac ttctttaata
    34921 gatgcaatcg tttgagaagc aaatgcttcg ttcaattcga tcaaatcaat gtcttcaaca
    34981 gatagattgc tgagtgacaa tacttcagga atcgcatatg caggcccaat acccataatt
    35041 ttcgggtcaa cgcctactgc cttaaaacca acgaatcgtg caataggtgt cacgccgagt
    35101 tctttcactt tatctccaga cattaaaact acaaatcctg caccatcaga aagtggggca
    35161 gatgttcctg cagtcacagt gccgtcagct ttaaatactg tacgtaattt ggctaatgcc
    35221 tccatcgtgg tgtcagggcg tataaattca tcttggtcaa agatatttgt gtgtactttt
    35281 ggtcctgcgt ttgtatattc aactgagttt acttgtattg gaataatttc atctttgaac
    35341 cgaccatcac gttgtgcgtc ataggcacgt tgatgacttc tgacagcata agcatcttga
    35401 tcttcgcgtg atacgtcaaa ttgggatgct acattttcag cagttaaacc cataggatat
    35461 gacgcaccta tatcatcata ttgtaaggtt ggattgtttg tgggctcgtt gccacccatt
    35521 ggtacggcac tcatcaattc aacgccacca gctacaagta tatctccttg accagccata
    35581 atttgattgg ctgcaatcgc gatggtttgt aatcctgatg agcagtagcg attcactgtt
    35641 tgacccggta ccgtgtcaga taatcccgca cgcaatgcaa tcgttcgtgc aatgttttgg
    35701 ccttgtaatc cttctggaaa agccgtacca acaatgacat cttcaatcat attcttattg
    35761 aattttccgt caatacgttt caatacgcct tgtaatactt tggctgcgac atcatcaggt
    35821 ctttcgtgga ataatgcgcc ttgctttgct ttcgctgcgg ctgaacgccc ataagctaca
    35881 atgtatgctt cttgcatggt tatcatcctc tcttaatgac tatcttttaa ttacgtaatg
    35941 gcttaccagt ttttaacata tgtgcaattc tttcatatga ttttttagat tttagtaagt
    36001 caataaagcc aattttctcc aacgattgaa tgtaacgttg attgataaat gtatttcttg
    36061 gtaaatcacc acccgctaaa attgtggcga tatttaaggc aatatgataa tcatggtcgc
    36121 taataaaatg accccgtctt tgcgcatcta attgtccttg gatcaatgct ttgaagtctt
    36181 cacctaaagc gatatattga tgtctaggat tcggaatata gtttgtttct gcttcatatt
    36241 tcgcacgttt gagcgcaact tcgacacgtt gtgctgtatt gaaaataatc gtatctgtat
    36301 cacgtaaata accataacga cgtgcctcaa aggcatttgt agagactttc gcaaatgcga
    36361 tattcgtcag tacttttgtc atggaagctt gtttgtcatc aaacttatgc gatgtgcgta
    36421 atatgcgatc agccatttct gcaaggccac cgccactcgg taataagcca acacctgctt
    36481 caacaagacc gatatatgtt tcacttgcag cgacaacaat aggtgagtaa agtacaagct
    36541 cacagccacc gcctaaggca cgaccttgaa cagctgtgac tactggtttc aaactatact
    36601 tcaaacgatt aaagctataa tgtaatttat caattgattg tgcaacgaca tcatctacaa
    36661 gaccgtcttc atgcgccttt ttcattaaga aaaggttagc acccacactg aaattgttac
    36721 catctgcata aataaccata cttgtgtaat ggtcattttc cagtaaatca atcgcatcaa
    36781 ctaacgcatc gttgaattca tcggtaatga cattattttt actttgtaat ttcagtaaca
    36841 gttgatcatc atgagttacg gaaagtttgg catcaccttt atcccaaagt tcatctttta
    36901 cgaagtgaga aataggtgtt gcatattcaa tggtctcatc ttgtttataa aagccaccat
    36961 ctaaatcact aatccattgt ggtaagtctc caagttcgtc ttccatacgt gttttaacac
    37021 gttcgtatcc cattgcatcc cataattgga atggaccaag tttccagttg aacccccaga
    37081 caagcgcacg gtctatgtct cggaaatcat cggtagcttt aggtacattg atagcagagt
    37141 aatagaaatt attacgtaat gtctcccata aaaatagtcc cgcttcgtct tgcgcattga
    37201 atatggtatc aaggttatgc actaagtctt tattaaattc atttaaaatt ggtaattgtg
    37261 gttgcgatac aggtacataa tcttgttttt caacatcgta aacaagtcga gctttagttt
    37321 ctttatcctt tttgtaaaat ccttgtttcg ttttacgtcc gagtgcgcca ttgtcaaaca
    37381 acgtatttac aattttgaca tcatgaaaat aaggtgtttc ttcaggtact tgttgcatgc
    37441 ctttaattac agacactgca atatctaaac cgactaggtc agatagcgca tatgtacctg
    37501 ttttaggacg accaatcgct tgcccagtta aagcatccac atctacaatg cttatcttgt
    37561 gttgctcggc gcgatacata atatcattca ttgtttgcgt gccgactcta tttgcgacaa
    37621 agccaggcac atcattgacg acaatgacac ctttacctaa cacattttgc gcgaaatttt
    37681 ttacatctaa tataatagat tccttcgtgt gtgacgtagg tattaactcc actaatttca
    37741 taatacgtgg tgggttaaag aaatgtagac caaagaatcg ttcttgatcc ttctcgttaa
    37801 atgcttgagc aatcgcatta attggaatac ctgatgtatt tgtagcgaat aaagcatctt
    37861 ctttagcatg ttgtagaact tgttgccaaa cagcatgctt aatttcaata tcttctttga
    37921 ctgcttcgat atataaatca gcatcatcat ttaccaagtc atcatcaaaa ttaccatatg
    37981 ttaaatgact cgctagattt aagtcgaata gtagcggccg tttcttatct gtaattttat
    38041 cgtaagattt tttcgcaatg agatttggat cgtttttgtc cactacaata tctaatagtt
    38101 ttactttaag tccagcattc acaaaaagtg ctgccagttg agcgcccatt gtgcctgcgc
    38161 caagaacggt tactttatta attgtcatag tgattcctcc aatttagttg aggataagat
    38221 aaccattaag ataattggaa taacgttgct attttataaa attaattaag tatctttgac
    38281 agtcatctta gcctcttatt taaggaaaaa gctttatgct taaaataagt cttttttagt
    38341 gaaattaatg catctcatat aattatttgc tatttatacg aaagcagaat ctccagtcaa
    38401 agcgcgtcca attactaagg cattaatttc atgtgtacct tcgtacgtgt aaatcgcttc
    38461 tgcatcagag aagaaacgtg caatatcata atcgtcagct agtatgccat taccacctgt
    38521 aataccgcgg cccatagcta ctgtctcacg caaacgtaag gcattcatca tcttcgccgt
    38581 tgaagttgca acctcgtcat attcaccatg tgcttgcata ttagctaatt gagcacatgt
    38641 tgccattgct tgagctaaat taccttgcat cattgctagc ttttcttgta ttaactgata
    38701 tttactaatt ggtttgccga attgcttacg ctcagtgaca taatctaatg tggcacgtaa
    38761 agcgccagcc ataccacctg tagccatata agcaacgcct gctctcgttg aataaagaat
    38821 tttggcaata tctttaaagc ttgttatgtt ttgtaagcga tccgcttcat ctactttgac
    38881 attagttaat ttaattaggg cgttaggaac aatgcgaagt gcgattttat tatcaatgac
    38941 ttcaatatcg acgccatctt gttctggtct gactacaaag caatggggtt tgccagtttc
    39001 tttatttact gcgaatactg gaatgacatc agatacatgt gcaccaccaa tccatttctt
    39061 ttcaccattg ataacccaag tatcgccttg gcgttcagcg actgtttcaa gacctcccgc
    39121 aacgtccgaa ccgtgttctg gttcagttaa agcaaagcat gtacgcagtt catgtgactg
    39181 taatttaggt acatatttcg caatttgttc tttgctacct ccgaaataga aagtgttatg
    39241 ccctaaacct tggtgaacac cgagtagggt agctaaggaa atatcaaatc gcgcgagtag
    39301 gtaagacatg aaaaactgaa atagttgact aggcattttg gcgtttggac gatccttgta
    39361 aagtaatgga ttgttaaaat aatttaattc tcccagatct ttaaaatagt cctcgggtac
    39421 agtagcgtct atccaatgtt gattaatatt ttcacggtac ttactttcta gcaatgaatc
    39481 tacttgttgt aaaaattcga cttcaccgtc tgttaaacct ttagcaatac taagtacatc
    39541 ttcaggaaat aatgttttta agaccgtttc tttttcaaat gtcatataaa ttcctcctaa
    39601 aaataatatg aatactaatg tgaaatgcat ttaattcaaa aacaacacgc tttatttgta
    39661 aacgcttaca ctaaatgtca aaaattttta tcacctttaa agtgtttgcg agactttgtc
    39721 attcatcatt tgtcgaatcg caagtttatc tggtttctgc gtactgttta acggcatatg
    39781 tgtcactggt acatacattc ttgggacttt ataacctgct aaacgacttc gcatatgttg
    39841 atttaaaatt tcagcgtaat gaggttcatc ttcgcgaagt ataatggctg cagcaattga
    39901 ttcaccatat tttggatgat catagccaac gaccacacac cggtctacta gtggatgctc
    39961 agctaaagca ttttcgactt cggatggtaa gacattttcg ccaccagtta tgattaattc
    40021 ttttttgcgg tcaataataa atatatcgcc atcgttgtcc atcttcgcta agtcaccagt
    40081 taataaatat cgaccatgaa atgctttggc agtctctgct ggtttattcc aatatcctgg
    40141 cgtgacattt ttagccttaa ttgcaagttc gccaatctca ccagtaggta cttcctcacc
    40201 gttatcatca aggatacgtg catcaacgaa catgactgct ttaccaatac tcattggctt
    40261 acgttttgaa ttttccggtg tattaacaag tacaagaggt gcttcagtta aaccatagcc
    40321 gttaataatg tttatgccat attgtttaaa agctgcttgg atacttggta atggttgtga
    40381 accaccttgg atgatataat ccatagctct aaaattttca ggattaaaat tactagcacg
    40441 tagcgtacta taatacattg tcggaatcat gataataaat gtagggtgat attgtgcaat
    40501 catgtcattc aattcttcgc cgttaaagta acgttgaaga ataagtgtgc cacctgacat
    40561 taatactggt aatacagtat cgttaaaccc taaaacatgg aacattggtg ttgatacaat
    40621 cgtaatatag tttgaattga acttatacgt cagctctaag tttgcaccgt tatgaacaaa
    40681 tgattcatat gagaacatca cacctttagg tgatccggtt gtaccacttg tataaattaa
    40741 tgctgcaaga tcttgtggtt caacaggtgt tgcttgaaaa ggttggtgat aatctggatt
    40801 tacgatttca tcatattgcg ccacatcaat atccatatgc aataagtttt ggtcaatatc
    40861 ggtgagtgaa cttaaatgtt tttcagcata gaagagcagt tttaattgtg catcttccac
    40921 aatggctgca atttcttttg ggttaagccg ccaattcaat ggtaaaaaaa ccgcacctgt
    40981 tttaaaacaa gcaaacaata aatctaatat tgcaatatca tttggcgcaa aaataccgat
    41041 aacatcgcct tttttaacac cttgagatgt taaataatgt gccatattat cagcgcgtgc
    41101 attgagttgt tggtatgtcc aagatgtttg ttttgcgtga tcaataacgg caggcttgtc
    41161 atcatcgaag tctgaacgcg tttttatcca atcgaaattc attagtatac cccctttagc
    41221 ttcactttca tactttatga attgattgtt taagttgtcc ccatttttct ttgtaaatgc
    41281 tggtatcaat taattttaaa tgatcagcaa taattggttt aaaagccatt tgattcaaaa
    41341 tatctttatg caaatcaaga cctggtgcaa tttcaattag tttcaagcct tgattggtga
    41401 gttcgaatac tgcacgatca gtaacaaaat agatttcttg ctcgagtgat tgtgaatatt
    41461 gtgcattaaa gtcgatatgg ctcacatctg atacaaattt ctggttttgt ccttcagttt
    41521 caatgtttaa tcgttgatta tggcatgaga catgactgcc agctacaaaa gtacctgaaa
    41581 agataatttt atttacagat tgcgtaatgt ctataaagcc accacatcca tttagtcggt
    41641 cattgaagta agacacgttg acattgccgt attgatcaac ctcagcaaag ctaagatagg
    41701 caactgatac accattgtta taaataaaat cccatgctcg atcatgaggc atgcgcacat
    41761 ctgcattgta attcatacca aaatgttcac gactcccaac gaatccaccg aaaatgccaa
    41821 catctaaaat cggttgcaca tcatgttcaa cacattcttc atgcaataaa ttagagagtt
    41881 cattattgat gccataaccg atgctaattg tatcgccata agttaaaaac tgagcagcac
    41941 gtcggagaat caatttgcga ctattaaaag gtaatgcggg ttcaggtatt ccatcaattc
    42001 gttcttctcc agacaaggct ggtaaataat gactttgaat tacttggcgg tgattctttt
    42061 catcttctgt gacgtataca taatcgacaa gatttcctgg gataacaact tcattcggtt
    42121 ttagttgata gtcgtcaact aaagctttaa cttgtacaat aactttccca tgattggctt
    42181 tcgcgtttaa tgcgacatga taacactcgc tcaagtacgc ttcttgagtt aaataaatgt
    42241 taccttgttg atctgcgtat gttcctctca gtagtgccac atcaacgcta gggaatgtgt
    42301 aatgtaagta tgtttcatcg ttgatggtta ctaatgaaac taaatcatcc gttgttcgtg
    42361 tatttacttt accgccaccg tatctaggat caacagctgt gtttaatccg attttagtaa
    42421 taactccagg taataattga ttactctgac gataatgagt tgcaatgata ccttgtggta
    42481 aaaaataagc ttcaatgtca ttatttttca ttgcttgtgc cgttttggaa gaagccgtta
    42541 aaatactcat aatgacacgt ttaatcatgc gacgttctat aaaatcatct aaatccggtg
    42601 cggcacctaa actatgaata tcattcgcta atataaacgt taaatcattg ggcgtatgat
    42661 atgtgtcatg ttgcgctaac acagcacgta gaacttcggc gggtaagttg gctacagcta
    42721 atgctggtaa accaatcaca tcaccatctt taatgatatg ttgtaagtcg tgccatgtga
    42781 tttgtttcaa gcaagtcacc tccatcacat ttgataaaat atagcgtttt tacactttgt
    42841 gtaaaccctt acaagaaata taacataacg acgtttaaaa tcaattagaa atatcttttt
    42901 attctgataa tagacacagt atagacacat tttgatggtc gataacaatt gtaatatcaa
    42961 gggtttgtaa tgaattgaat atcattaaaa tacttatata aaaatattgt tcggaatata
    43021 aaaagttaaa taggttttga tttttaaata tgaaatacaa agtgcccaat cgaacaaagt
    43081 atttatatta aaatatggaa aatccatcaa tattaaatta aaatagtttt attatgaaaa
    43141 gtgaaagtag gtaagtctat ggaaggtctt aatcatcgaa gaaatacaga aaaagaagag
    43201 acaacacaaa cgcaatcagt tgcacctaat acaggtgaag aggggatgtc atcagcaagt
    43261 acacaatcaa ctaagacgtc cgacatacat aatgaatcta tcgataaaca aatggaagct
    43321 aaagcgcatg aaacagcgca aaatacagat ttaaaaaacg aagcaagaag tttatttgat
    43381 aatgcaacca aatcaatcgg tagactagcg ggcaatgatg aaagcttaaa tcttaattta
    43441 aaagatatgc tttctgaagt atttaagccg catactaaaa acgaagcaga tgaaatattt
    43501 atagcgggta ctgctaaaac tacgccagca atttgtgaca tatcagaaga atgggggaag
    43561 ccatggctct tttctcgagt attcatcgct ttcacagtaa catttattgg attatgggtc
    43621 atggcagcaa tttttaataa cactaacgcg attccgggtc tcatttttat aggggcttta
    43681 acagtaccat tatcgggttt gttcttcttt tatgaatcaa atgcgtttaa aaatattagc
    43741 atttttgaag ttattatcat gttctttatt ggcggcgtat tttcattact aagtacgatg
    43801 gtattatata gatttgtcgt ttttagtgat caattcgaaa ggtttggttc tttaacattt
    43861 ttcgatgcat ttttagtagg attagttgaa gaaactggaa aagcactcat tattgtttat
    43921 ttcgtcaata aattgaaaac aaataagatt ttgaatggat tattaatcgg tgctgctatt
    43981 ggtgcagggt tcgcagtttt tgaatcagca ggttatattt tgaatttcgc tttaggagaa
    44041 aatgtcccat tattagatat tgtcttcaca cgtgcgtgga ctgcgattgg tggtcattta
    44101 gtttggtcag cgattgttgg tgctgcaata gttattgcga aagaacagca tggctttgaa
    44161 ttcaaagata tttttgataa acgcttttta atattctttt tatcagccgt tgttttacat
    44221 ggcatttggg atacatcttt aactgtactt ggcagtgata cgttgaaaat atttatttta
    44281 atcgttattg tgtggatact tgtattcatt ttaatggggg caggtttaaa acaagtgaat
    44341 ttactgcaga aagaatttaa agaacaacag aaaaaagtag acgaataata attaaagctt
    44401 atgttgctca tatgtttgtg acataagcta tttttataat ttgtctttaa aagagtggaa
    44461 taggaatact ttttggagtt aaaaaagtgt ttcacgttaa acaaatagtg acaattagat
    44521 ttatataaaa tgaacatgat tcactgaaag tatgtaataa tcattttatt gaaattcatc
    44581 aaacagaaat taatacaatc atataagcaa attaaaccac gccataatca tattggatga
    44641 cttcggcgtg gtttttatag ttgaagcagg gctgagacat aaatcaatgt cccacactcc
    44701 cttatcgttc aatcgttgtt cgataatcga ttaaatagat accttcaggt gttactttat
    44761 aatttttaac cttagagtta gcagcgacta tttgatcgtt gtaagcaata taactgtttg
    44821 gtacatctcg acttgataat ttaataatat cattagaaat attgtgacgt tccttaacat
    44881 ctacagtatg attcaattga ttaattaaat catcgacgtt gctattattg tagtctcctt
    44941 tattaatagc accatctttt ttatatgctt gattaaagaa ataacctgta tctccacgag
    45001 gaattgttcc gaaactatac atcgttgcat cccatgcaga acggtctttt aagtaacctt
    45061 ctatgtcatc aacactttta atgtcgattt caatatttgc ttttttagca tctgattgta
    45121 atacttgcgc aattttcgat agctctggac gaccgtcata cgtaattaac ttaattttta
    45181 aagggtgttc ttttgtataa ccatctttag ctaataacat ttttgcttgt tcgatatttt
    45241 gtttggttaa cttaggttct ttaatatatg gaattttatc attaaatgga ctcgttgcag
    45301 gtttcgcata accttgataa atatgatctg caataccttg tctatcaatg atatgatcta
    45361 atgcttcacg aacggattta gtcatttttt tattagtatg attatacata agtaaagaag
    45421 ttctaaatcc agattctttt gacactttta aattttgatt attttctatg tcttgaactt
    45481 tattaactgg gacatcagtt attaaatcat ctttttgaga ttctaaattt ctgacgcgat
    45541 tattgccgtc ttcttggtac gtcacagtaa tatgatcaag tttcggttta ccttgccaat
    45601 agtccttaaa attcgacaat gatatttttc gagattgctt ataatctttt atttggtaag
    45661 ggcctgtacc aacaggagtt tgattaacat ctgatttagc atctgtatca taaattgcca
    45721 taaaaggatt agctaattca gatacaagtt cagggtaagc ggagttggtt ttaattgtca
    45781 gtttttgacc tttagcggta attgatgata ttggtaatga atatttgacc aagtcgcttt
    45841 ttttcatgct attttcaagg ctagatttca ctttttctgc agtcaatttt tgaccgtttt
    45901 gaaatttaat attatctttt aattctatat ctaacgttgt atcatttggt tgatgatacg
    45961 atttcactaa tgctttttct atttttcctt gatcatttgt tttaaataat gattctgcag
    46021 caccaatctt aactggtaca tctgtttcat aaggtgcaat agactttgtt tttaacggta
    46081 acgaaatatt taagtctttg ccagatgaat gcattgagcc acatcctgat aacactaata
    46141 ctgctgaaaa tatagttgct agtcttttaa acttcatttc attaacactc tctttctaat
    46201 tactatgtaa aacccaacaa ttaatatttt aaaactttat tttgttaaag taaaatgttg
    46261 ttcaagttta gtaattatta aagttcaatt aattgtagta attatgcttt ttaaaaataa
    46321 atattagaaa tgaagttagc gacatttata gtgattcacg ataaacatat ataactaagt
    46381 attgagcaac tgctgtagta ctacagcttg gttatgttta gtatcttttg ctgcatataa
    46441 caatagaaca tgattatgct gatttacaat atcctttaat ttttcaaaag catctttttg
    46501 cgcatcctga tcacgtaatt ctttttcata tttttcttta aaagctccaa aaagtttagg
    46561 atcatgttgg aaccattgtc gcaactcagt agaaggggca atgtctttta accaataatc
    46621 taggttagca gttcttttcg aaatacctct cggccagact ctatcgacta ggatacgaat
    46681 agcgtcggta ttatctttat tgtcataaat ccgtccaata tctacggtca tcttgtgaac
    46741 tcctttctta tgaaattcag tgagcataca tcaatgcatg ttgtggtggg acgaccaaat
    46801 aaattttgcg aaaatatcat ctctgtccta ctcccaatta aaaaacagcc atgacaaagt
    46861 aaagtcatag ctgttttggt atagatgtca tttattttta cgtttagtta aatacttcaa
    46921 accaactgca aagaccgtgt acccggctat ggtttgtatc aatgttttaa ttaaattatt
    46981 atttttaaca ataatatttg cagtaacaat acttacgaaa tataatgcaa atacttttac
    47041 gtaacgttga ttaagtttca tatgagcact aaacctcttt tctcagttat actgcaacgc
    47101 ttagtcttgg aataaatgtt tcgtagtgta cgcgatccat atcgtaattt aaagatttaa
    47161 gtgcttcgat catagattgt aagaattttg taccaccaca gatataaatt tcaggtttat
    47221 ttgctaaaaa tacttgtaat tcttcagcac caatatagcc ttgtttatct tttaagtgtg
    47281 tatataattt agcgttgtca tgatggcttg cgatactgtt gaagttgtct ttgaaaggta
    47341 aatgttgttc attttcagca acttgaacca tctgtgtatc taaacctttg gcagaggcag
    47401 cttcatacat agctactaaa ggtgtaacac caatacctga acctaagaaa agttgtggtt
    47461 cagtcgtatt ctctaatacg aatccaccta caggcgcagc taaattaatc atatcgcctt
    47521 ctttaatctc atcgtgtaaa attgttgaaa cttcgccttc atgttctgtt gtgacatcac
    47581 gtttaacgcc aaaagttaaa tggttttttt cacctgatac gatagaatag tgacgtttag
    47641 ctctatatgg aagtttatca ctagaaacat caactgtgat gtattggcct ggtgtaaatt
    47701 cactaaagtc atattcttca gtttcaactg taaatgattt aatgtcttca gattcttgtt
    47761 taatattggt aattttgaat ggtttaaaac caatccacat catttgatca taaatttctt
    47821 tttcaatttg gatgaacaca tccgcaataa cgccatatgc ttttgcccaa gcttgaatga
    47881 cagggtcatt ttcttctaat cctgtcacgt cttgaatggc ttttaataaa tttttcccca
    47941 caattggata atgttcagca taaacttgta gtgcgcagtg tttatatgcg actggcataa
    48001 tgactggttt aataacactt aagttatcga tattaaccgc tgcggccatt acagcttgtg
    48061 ctaatgctga agattgcatg cctcgttttt ggttcgtttg attaaacatg tttaaaagtt
    48121 caggatgcgc tttaaacatt tttggataaa agattgacgt aatttctgtc cctttctctt
    48181 taagtaaagg caccgtttgt ttgataatgt ctttctcttg ttctgtaagc atgatactcc
    48241 tcctttaatc tgtatatttt gattattcta ctaaaaattt cgatattcaa ttaattggtt
    48301 tgagaaaata taaataaaat ggcaaatttg ataattgtat gacattttta attttttaaa
    48361 tacttatcaa taagcattgt gtacaattgt ctgtttgcac accgacgatt gagcgcattt
    48421 atttgactaa ttcaaaaaac attgttgttt tcctagaaaa aagtaaacat gataataaaa
    48481 atgtgaaagt gtaaataatc actggcgaag tacgaagact aaagacatct aagatgtaat
    48541 cgtatacaaa ttaaaaaggt gtaaaaatta aaataaaatg tgaaataaat cacaatttaa
    48601 tattgaccca gtacttaatg catgttacat tttatatgtg aaataaatca caaacttaaa
    48661 agcggatgac acatgacctt ttaagttatg cgttgaaaat aaaagagatg tttatttgct
    48721 tttgtatcgt caataagcag cattaaacta acatatttga agctacatgt atgttagtga
    48781 attaatcata agggagtttt tgtaatgaac aaatttaaag ggaacaaagt tgtattaata
    48841 ggtaatggtg cagtaggttc aagctacgca ttttcattag tgaaccaaag cattgttgat
    48901 gaattagtca tcattgattt agacactgaa aaagttcgag gagatgttat ggatttaaaa
    48961 catgccacac catattctcc aacaacagtt cgtgtgaaag ctggcgaata cagtgattgt
    49021 catgatgcgg atctagttgt catctgtgct ggtgctgcac aaaaacctgg agaaacacgt
    49081 ttagatttag tatctaaaaa cttgaaaata ttcaaatcaa ttgttggtga agtaatggca
    49141 tcaaaatttg atggtatttt cttggtagct acaaatcctg ttgatatttt agcgtatgca
    49201 acatggaaat tctctggttt acctaaagaa cgtgttatag gttctggtac aattttagac
    49261 tctgcacgct ttagattatt gttaagcgaa gcgttcgatg ttgcgccacg tagcgtcgat
    49321 gctcaaatta ttggtgaaca tggtgacact gaattaccag tatggtcaca cgctaatatt
    49381 gcgggtcaac ctttgaagac attacttgaa caacgtcctg agggcaaagc gcaaattgaa
    49441 caaatttttg ttcaaacacg tgatgcagca tatgacatta ttcaagctaa aggtgccact
    49501 tattatggtg ttgcaatggg attagctaga attactgaag cgattttcag aaatgaagat
    49561 gccgtattga ctgtatcagc attattagaa ggcgaatatg aggaagaaga tgtttatatt
    49621 ggtgttccag cagtcatcaa tagaaacggt attcgcaacg tcgtagaaat cccattaaac
    49681 gacgaagaac aaagcaagtt cgcacattca gctaaaacat taaaagatat tatggctgaa
    49741 gcagaagaac ttaaataact ttttataaaa tctataccat cccaaaaatt gtaaaacctt
    49801 acccaaaaaa ttgtataaag ggctatttga tacaactata tgtgtcgagt agccctattt
    49861 ttaatgtagt gaaagtcgtt gttgaaatta aattcaaatc tggcacttaa gctttaatca
    49921 tagcattaag atgattgtct agcagaggcg atttgcgggc tcactacagt gcatgatgaa
    49981 cttaatgctt caaatgtaac attaaaaata aaagcaacga tgtcacttct tacttcgtac
    50041 atcgttgcca ttagttctgt tgatatttcg gttagtctta atccccgagc aattcttcaa
    50101 tttcattttt gataactgta acgtgaggcc cataaattac ttgcacacca gtgccttgct
    50161 ggattacacc tttggcacca gtactttcga gtaatacttt atcgactttg tcattttgat
    50221 gaagtgtgac gcgtagtctc gttgcacaac agtcaacgat ttcaatgtta tctttgcctc
    50281 ccaaaccagc aacaatagtt tgtgctcttt cagtagcctc aacttgttgt gctgcagctt
    50341 tatcttctcg accaggtgtt ttgaaattaa atttcgtaat taagaatctg aaaacgatgt
    50401 aatacaaaca gaaccacaca attccaatag gtatgacgta taggtagttt gttttactat
    50461 taccttgtag cacaccaaag agtaagaaat cgataaagcc tccactgaag gtttgaccaa
    50521 ttgtaatgtt gaaaatgtct gccatcataa atgctaatcc atcaaagaag gcatggatta
    50581 cataaagaat aggtgcgaca aacaagaaac taaactctaa aggttcggta atacctgtta
    50641 aaaatgaagt gagtgcagcg gataacatta aaccgccgac aactttttta tgttcaggtt
    50701 tagctgtgtg ataaattgca agtgcggcac cacataagcc gaacatcatc gtaataaaac
    50761 ggcctgacat aaagcgtgac acacctgaat aatacttcgt cacatctgga tcaccaagtt
    50821 gagcaaagaa gatgttctgc gtaccttgaa ctaagtgccc tttgacttct aaagtaccac
    50881 caagtgccgt ctgccaaaac ggtaagtaaa aaatatggtg taaaccgagt ggacctaaca
    50941 atcttaagat gaagccataa acaaaagtac cgatggcacc tgttttcgtt acaaatccac
    51001 caacatgata aatgccggct tgtatgcttg gccaaatgaa aaacatcaat acacctaaaa
    51061 agattgcggc aaatgctgtg acaataggga caaatctaga gccaccaaag aaacctaaat
    51121 acggtggtaa taccactttg tgatatttgt tgtgaagtat tgcggtcata atacctgtga
    51181 taatcccgcc aaaaacaccg gtttcaaccg tttgtatacc gagcaccatg ccttgtccat
    51241 tttgtgcaag ctgatctttt gccaatgtgc ccgtgatagt taataagcca ttcatagttg
    51301 cgttcataat taagaaaccg agcagcgcag ctaaacctgc agtaccttta tcgcttctag
    51361 ataatccgat tgcgacacca attgcaaaga tgaccggtaa attttggaaa acaatactac
    51421 ctgcagctga cattaatgta aaaatatttt gtaataaggt aatatctaaa atagggtatg
    51481 ctttaacggt gtttggatta cttaatgcac caccgatacc caacaataga cctgcagctg
    51541 gtaagattgc gataggtaac ataaaggact tgccgaactg ctgtgctttt tcaaataaag
    51601 atttcatcaa catccctcct aattattctc aatatagctt ttgagaaatt taatatcaat
    51661 atatattctg tgtatgaaaa tatttttcat aaaaattgtt tgaatcatgt aacaatcata
    51721 taaattgctg tttatattgt tgtgaaaatg agttgacaaa agtcggtata gatatgtaga
    51781 catcctattt ttagcgaggt aggttgataa ggcatatcgg ataaatttat aagccataaa
    51841 atagataaat agtgtttgta tccaaaaata tgagaaagtt aaaactattt ttcaaaataa
    51901 acatgattca ccacataaat aaatatacat aagctatcga taacaactta agaaaggtgg
    51961 atatataaat gaaaagaaag attattatgg attgtgatcc aggacacgat gatgcaatag
    52021 cattaatttt agcgggggca attgacagtc cactagagat attagctgta acaacagtcg
    52081 caggtaatca atcagttgac aagaatacga caaacgcctt gaacgtattg gatattatgg
    52141 gacgccaaga tatagcagta gcgaaaggtg cggataggcc gttaattaaa ccagctgcct
    52201 ttgcttctga aatacatggg gaatctggat tagatggtcc gaaactaccg tcgacaccat
    52261 cacgtcaagc agttgcaatg ccagcatcag atgtgattat aaacaaagtg atgacgagtg
    52321 atacacctgt aacaattgta gcgacaggtc ctcttacgaa tgtagcaacg gcattgattc
    52381 gtgagccaag aatcgctgag catattgaat ctattacttt gatgggtggt ggtacatttg
    52441 gaaattggac gcctacagca gaattcaata tttgggtaga tgctgaagca gcgaagcgtg
    52501 tttttgaaag tgggattact ataaatgtgt ttggtttaga tgtaacacat caagttttag
    52561 ccgacgatca cgtgattgaa cgctttgaaa gtatcaataa tcctgttgca cagttcgtcg
    52621 tagaattatt gcaattcttt aagaagacat acaagactca ctttaatatg gatggtggtc
    52681 caatacatga tgcttgtaca attttgtatt tgttacaacc agaattgttt acaatggtac
    52741 ccgttaatat cgacattgaa catcaaagtc cactaactta tggcactatg gctgtcgatt
    52801 taaatcatgt tacaggtaag cctgccaatg cttattttgc tacagcagtt gatgttgaag
    52861 aagtgtggaa cttgatagac cataagttac gtacatacga ataataatac ttaattaaat
    52921 agatacagtt aaccctaagg cgcctgatat aagcgtcctt agggtttttg tattgggtta
    52981 caatggtcat gacaatttga taatgattga gatatgtatg ttaaaaatgc ttcaaaaaaa
    53041 cacaaaacac aaaaatatat gcaaaaattt caattgcttt attttaaaag attaaaatca
    53101 caaaaaatat agatataatt gaaatgttgt taaaacatca caatgatgta catgctcatt
    53161 ttgaaaatat gtgttcaaag tgtgtacatc ggtgtgacga ttgatgataa attgagctca
    53221 gatgctcaaa ggagaatcga acatgaacgg ggataatcag caaatactca gagaaattgt
    53281 attgaatcct actattcatg gtaaagaact tgaatcgata tttggtttgt ctcgtagaca
    53341 actaggatat cgcattcaaa aaatcaattt gtggcttgaa caagagggtt atccaaaact
    53401 tgaaagaaca agccaaggaa attttattgt aagttctgaa atcatgacgt tattcaagcg
    53461 agatgtatcg gagcagcaaa tgttaaacgg caacaatgtc atttttagca tagaaacacg
    53521 tcgttattat ttaatgctca tgctttttag taaggaaaac gcaatgtctc taaaccattt
    53581 ttcaattgat ttacaagtca gtaaaaatac tgtcattcac gatataaatc atgtgaaaga
    53641 gcaattggaa aatcatggtt tgtcacttaa gtattctcga aaacatggtt atgaaattgt
    53701 tggtgatgaa tttgaagttc gccgtttctt cattaagttg attgatcaaa ggttgaatca
    53761 tgatattact aaaagtgaag ttttaaaggc gctcaactta acattcgaag atatcgcata
    53821 tcaaaaagac aagatcaaac aggtagaaca atttttgaag agtcgcttta tagacaaatc
    53881 acttagttca ttgccttatg tcctttgtgt gattcgtaga cgaattcaaa gtggtcatgt
    53941 gatgaatcca ttaaatatta attatcagta tttgagggat acgaaagaat atcaagcaac
    54001 ggagattatg acgcaacatg agccggattt gccagaagcg gaaaagttat atttgacatt
    54061 acacttactt tcaacaagtg tgcaatggac tgatttgcaa gaatcagata gcatatcgaa
    54121 tttaacgatg gccatcgctc aaatgattca ccattttgaa caaatcactt ttattaacat
    54181 tgaagataag gagaaattat cacagcaact cttgttacat ttaacgcctg ctttttatag
    54241 gattaaatat aacttaacgg atcgtgatga attaataaat cctttacaag gaaattatca
    54301 atccttattt catatggtga aacaatcatg tcaatcgtta actgaatatt tcggaaaatc
    54361 gttgcctgat aatgaaatag catatttaac catgttgttc ggaggtagtt tgagacgtca
    54421 agatgaaaac ttcgatggca agataaaagc tattatcgtg tgtacacaag gcacgtcagt
    54481 atcacaaatg atgttatacg agttgcgaaa cttatttcca gaaattattt tcttagatgc
    54541 gatttcactt agaacatttg aaaattacac attagattat gacatcgtct tttcaccaat
    54601 gtttgtccta acacataaaa aattatttat cacaaaagta gctttatctg aaaatgagca
    54661 acgaaagtta cgtaaagaag tgatgaagta cattaataag gaatcggctg acattgataa
    54721 ggaaataaac aagttaatgg cattaattga acgcacaacg acagttaatg aaattacaga
    54781 actacgtgat ggtttagaag attttattgc caattataat tcaatttcaa ccattaatgg
    54841 atcgattgtc acacaaaata agacattaga tttagctgac ttgataccgg caaggcacgt
    54901 gaaaagaatg catcatgttg aaaatattga tgaagctatt gctaaagcaa gtgatgtgtt
    54961 agttgctaat cattttattg atattaaata tattcatgag atgcaacagg tatttgatga
    55021 ttcgtatatg gttatcatgc aaaatattgc tattccacat gcatactctg aaaagcatgt
    55081 acataaaaca gcgatgagta tgttgatatt acaagaacca atatacatgt cagatggcac
    55141 agcaatccat attattgtac ctattgctgc tgttgataaa gtgacacact taagagcgtt
    55201 actacaattg agagatgtgg cgcaagacaa tgacgcaatt aagcgcatca tacaaagtcg
    55261 caaaaattct gatgtaaatg agattttaaa aaattattca aataaagaag cgagggaaaa
    55321 tggatgggac agcaattagt gcataaagaa aatataatgc tcaatttgtc ggcaactgat
    55381 aaagaatccg tattgtcaca aatgtcagat gtgttatttc aaaatgggtt cgtgaagtca
    55441 acgtttaaag atgcagtcat cgacagagaa aaagaatttg ctactggttt accaacgcat
    55501 ctatgttcgg tcgctatacc gcatacagat gtcgaacata ttaaccatag aacgataggt
    55561 gtggctgttc tagaaaaaga agtgccgttt attgaaatgg gaacacttga tcaacagaca
    55621 gaagtgaaaa tcgtttttat gttagcaatg gataaagtag atgatcaact taagctgtta
    55681 caacagttga tgcaaatttt tcaaagtgaa gaaaaattgg agcagattct acgaacgaaa
    55741 gatgaaacaa ttttagcaac actaatcaat gattatttgg aatataacta aaaattaatt
    55801 ggaggaattg aaaatgaaac aagtattagt agcgtgtggt gcaggtattg caacgtcaac
    55861 agtagtaaat aatgcaattg aagaaatggc aaaggaacac aatattaaag tagatattaa
    55921 acaaatcaaa attacagaag ttggacctta tgaagacact gcagatttat tagttacaac
    55981 tgcaatgaca aaaaaagaat ataaattccc agttatcaac gcacgtaatt tcttaactgg
    56041 tattggtatt gaagaaacaa aacaacaaat cttaacagag ttacaaaaat aacggaattg
    56101 atatgtaacg tgggtcgata acatattaat atatgcaaat tgcatataaa tgactatcac
    56161 gacaaatgat tgttgatgac atagaaacgc agtgactgta attcaaaagg actgcagtcg
    56221 aatttagcaa gggttgtcgt tgaaatgact gtaacgtcaa atgtaatcac aatcggaaag
    56281 tatcgtgaca atgcatatat aacagggagg gtttaaatat gagttacttc actgattttg
    56341 taaggggatt tttagattta ggtgcaactg ttattttacc ggttgtcata ttcttgcttg
    56401 gcctattctt taggcagaaa attggagcgg catttaggtc tggtttaaca ataggtgtgg
    56461 cttttgtagg gattttctta gtcatcgatt tattagttaa aaatttaggg ccagcagcac
    56521 aagcgatggt taaaaattta ggcgtcagtc tgaatgtgat tgatgtaggt tggccagcaa
    56581 catcatctat cgcttgggca tcatctgtcg cagcatttat tattccactc ggaatcatag
    56641 ttaacgttgt attgctagta actaaagtga caaagacgat gaatgtagat atttggaatt
    56701 tttggcatta tacgtttaca gcagcaatgg tttatgccgt atcaggcagt atttggcaag
    56761 cgttattagc agcagttatt ttccaaatta tctgtttgaa agtagcagat tggacagcac
    56821 cgatgatgag tgagttcttt gatttaccag gtgtatcgat tgctacagga agtacaattt
    56881 cttatgcacc aggtatttac ttagttaaat tgttacaaaa agtacccggt ctgaataagt
    56941 tagatgctga tcctgaaaca attcaaaaac gttttggcgc atttggagag tctatatttg
    57001 tcggcttaat tttaggttta ggtattggtg tgttagcagg ttacaaacct ggagacatca
    57061 ttaatttagg aatgtcaatg gctgcagtaa tggtattaat gcctagaatg gtaaaaatct
    57121 taatggaagg tttaatgcca gtttcagagt ctgcaagaac atggctaaat aaacgttttg
    57181 gcgaacgtga aatttatatt ggattggatg cggctgtagc attaggtcat ccagcagtta
    57241 tttcgacagc attaatttta gtacctatca ctgttttatt agccgttatt ttaccaggaa
    57301 accaagtact accttttggt gacttagcaa cgataccatt tgttgtcgcg tttattgttg
    57361 gtgcagcaag aggaaacatt attcattctg tcattgtggg tacgattatg attgcaattt
    57421 cactatatat tgcaacagac gtagcaccca ttttcacaga tatggcgaaa ggtacgaatg
    57481 tacaaatgcc aaaaggttca tctgaaattt caagtattga tcaaggtggt aatatcgtta
    57541 actatcttat ctttaaacta tttagtctat tcaattaaaa atcgaggtgt ttgtggtgaa
    57601 agctttagta aaaacaagag aaggacatgg caacttagaa cttcttgata aagaagttgc
    57661 aacaccgcta gatgataaag taaagattaa agtacattat gcaggaattt gtggcacaga
    57721 tattcatact tatgaaggtc attataaagt taattttcca gtgacattag gtcatgaatt
    57781 ttctggtgaa atcgttgaag ttggagcaga cgttaaagat tttaaagttg gtgaccgtgt
    57841 cacatctgaa acgacattct atgtttgtaa tgagtgtgaa tactgtaaat caaaagacta
    57901 taatttatgc aaccatcgaa aaggtattgg aacacaagtt gatggcgcat ttactaatta
    57961 tgtcattgca cgtgaagaaa gtttgcatca tattccagac gaagtatcgt atcagtctgc
    58021 agctatgaca gaaccattag catgtgcaca tcatggcgtt tctaagattc aagtcaattc
    58081 aggcgatgta gcagttgtaa tgggacctgg gccaatcgga ttacttgtag cacaagtgtt
    58141 aaaaagtaaa ggcgcaactg ttgtggtaac tggattggac aatgacaaag tcagattaga
    58201 taaagcagaa gcattgcaca tggattatgt agtcaattta caacaaacag acttaaaaac
    58261 gtatatcaat ggaattacag acggttacgg tgcagatgtt gttgttgaat gttcaggtgc
    58321 agttccagca gcacgacaag gtttggatat tttacgcaaa aaaggtttct acagtcaaat
    58381 aggtattttt aaggatgctg aaattccatt tgatatggaa aaagtgattc aaaaagaaat
    58441 aacagttgtt ggtagtagaa gtcaaaagcc agcagattgg gaaccttcat tgcaacttat
    58501 ggcggatggt ttagtaaatg ctgaagcttt ggtgacaaaa atatatgata tttcgaaatg
    58561 ggacgaggcg tatcaacatt taaaatccgg cgaaggtatt aaagcattac ttaagccgct
    58621 cgatttagat gaaaatgaag gagagaatta atatggtaga atcaatgcta acttttatgc
    58681 ttgggccatt aagacaaatc actgattttt atatggaaca tttactcgta agtaattcca
    58741 ttgtcattgc aggttatttt gcgacaggta tttttaaaaa gaaaaaagtt gtgaattaaa
    58801 tcaaatttga ggtgatttac aagtgaaagc attgaaatta tatggcgtgg aagatttacg
    58861 gtatgaggat aatgaaaagc cagtcattga aagtgcgaat gacgttatta ttaaagtacg
    58921 agcgactggc atatgtggtt cagacacgtc acgatacaaa aaaatggggc catacattaa
    58981 aggtatgcca tttggtcatg aattttcagg tgtagtagat gccattggaa gtgatgttac
    59041 gcatgttaat gtgggcgaca aagtgacagg ttgcccagca ataccttgtt atcaatgcga
    59101 gtattgttta aaaggtgaat atgcacgatg tgaaaagtta ttcgtcattg gctcatatga
    59161 acctggatcg ttcgcggaat atgtcaaatt gccagcgcaa aatgttttaa aggttccaga
    59221 caatgttgat tacattgaag cagcaatggt tgagccatca gccgttgttg cgcatgggtt
    59281 ttataaatcg aatatacaac ctggtatgac tgttgcagta atggggtgtg gcagtatagg
    59341 tttgttagct attcaatggg cacgaatatt tggtgctgca catatcatcg ctatagatat
    59401 agatgcgcat aaactagata ttgcaacatc attgggcgca catcaaacaa tcaattcaaa
    59461 agaagaaaat cttgagaaat tcatcgaaaa tcattacgcc aatcaaatcg atttagctat
    59521 agaatcatca ggtgctaaag ttacgattgg tcaaatattg acgctaccta aaaaaggtgg
    59581 cgaggtggta ttactcggaa taccatatga tgatattgag attgatcgcg ttcattttga
    59641 aaaaattctg cgtaacgagt tgacagtatg tggctcttgg aactgtttgt ccagtaattt
    59701 tccgggcaaa gagtggacgg caaccttaca ttatatgaag acgaaagata ttaatgtaaa
    59761 gcctattatt tctcattttt taccgttaga aaaaggcccg gagacatttg ataaattagt
    59821 taacaagaaa gaacgatttg ataaagtcat gtttacgatt tattagtatg cacctttgag
    59881 gacgaaaacg ctggtatagt tatagctatg aaagtgcgaa tgccgtctgg tctatagata
    59941 ctatcgaaat aattcatctt cgaatatacg ttgataaata gccggtttac ttgtgtgaaa
    60001 tatgcttgtg aatcggttgt tttgcatttt gtatacttaa aatgagatgg caatatttga
    60061 taatttttaa agtgaaaatc aagtacagcc acttaataag ataaatttat tataatatat
    60121 ggtaaaatga tggcagtaat aatgaatttg aaaaagagta aacattaata cctttaacaa
    60181 tttaatatcg tcagagttaa tgattaactg catggcaaaa caacttagaa tggtcagtta
    60241 caaaaataca tttttataaa aaattatcac actattgtga caactatctt tggattaata
    60301 aaagaggcaa gtgagcaata ggttaggctt atgtgcgggc ataggtcagt aatgtataaa
    60361 tggaaatgat gtaatgacag aatggaggac aacatgattt atgcaggtat tttagcagga
    60421 ggtattggtt cgagaatggg gaacgtgcca ttaccaaaac aatttttaga tattgataat
    60481 aaaccgattt taatccatac aattgagaag ttcattttag tgagtgaatt taatgagatt
    60541 attatcgcaa cgccagcaca gtggatttcc catacacagg atattttaaa aaaatataac
    60601 attacagatc aacgtgtcaa agtagttgca ggtggtacgg atcgaaatga aacaattatg
    60661 aacattatcg accatattcg caatgtaaat ggaattaata atgatgatgt gattgtaact
    60721 catgatgccg taagaccatt tttaactcaa cgtattatta aagagaacat tgaagtagca
    60781 gcaaaatatg gtgcagtaga tacagtcatt gaagcaattg atacgattgt aatgtctaaa
    60841 gataaacaga acatacacag tatccctgta aggaatgaaa tgtatcaagg ccaaacacca
    60901 caatcattta atattaaatt attacaagat agttatcgcg ccttaagtag tgaacaaaaa
    60961 gaaatcttat cagatgcatg taaaatcatt gtcgaatctg gacatgcagt taaattggta
    61021 cgtggagaac tatacaacat taaagtgaca acaccgtatg atttaaaagt agcaaatgtc
    61081 attattcaag gtgatattgc cgatgattaa tcaagtatat caactcgttg caccgagaca
    61141 gttcgacgtc acatataata atgttgatat ttatggtaat catgtcatcg taagaccttt
    61201 atacttgtct atttgtgcag ctgatcaaag gtattacaca ggtcgaagag atgaaaatgt
    61261 actacgcaaa aaattaccaa tgtcattagt tcatgaagct gttggtgaag ttgtatttga
    61321 tagtaaaggg gtatttgaaa aaggtacgaa agtagtaatg gtaccgaata cacctacaga
    61381 gcaacatcat attattgcgg agaattactt agcctctagt tattttagat ctagtggtta
    61441 tgatggtttt atgcaagact acgttgtgat ggcacatgat cgtatcgttc cgctgcctaa
    61501 tgacattgat ttgagtacga tttcatacac agagttagtg tcagtaagtt atcatgctat
    61561 acaacgattt gaacgtaaat ctataccttt gaaaaccagc tttggtattt ggggtgatgg
    61621 taacttaggt tatattactg ctattttgct acgtaagttg tacccagaag ctaaaactta
    61681 tgtatttggt aagacagact ataaattaag tcatttttca tttgtagatg acatctttac
    61741 agtaaatcaa ataccagatg atcttaaaat tgatcatgca tttgaatgtg ttggaggtaa
    61801 aggaagtcaa gttgcacttc aacaaatagt tgaacatatt tcaccagaag gcagtattgc
    61861 tttgttaggc gtaagtgaat tacccgtgga agtgaataca cgattagtac ttgaaaaagg
    61921 attaacgttg attggtagta gtcgaagcgg ctctaaagat tttgagcaag ttgttgattt
    61981 atatcgtaag tacccagaca tagttgaaaa gttagcatta ttaaaaggac atgaaattaa
    62041 tgtatgtacg atgcaagata tcgtccaagc gtttgaaatg gatttatcga catcttgggg
    62101 aaaaacagta ttgaaatgga cgatttaata aaccgatggg ggaataacaa tgacaaaaac
    62161 gaaacaagca atacatattg ataacatata ctgggaacgt gttcagttat atattgaagg
    62221 acatagtgaa ggtgtcgatt taacatcagg acaatttgtt ctgaggaatt taaccgaaac
    62281 aaaaacatta gaagcaaatg aaatgaaaat agacggtaat acatttatat gtagattcaa
    62341 cgtcgcaata ttagacgatg ggtattattt accaatggat aaatatttat ttgtttatca
    62401 tgaccagtta gagtatattg gacaacttaa tccaaatatt attgatcaag cttatgcggc
    62461 attaaatgaa gagcaaattg aagaatacaa tgagctgact acacaaaatg gaaaagtgaa
    62521 ctatttatta gcgtatgatg ctaaagtttt ccgtaaaggt ggcgtatcac aacatacggt
    62581 ctataccatt actccggaaa tagcaagtga cgttaacgaa tttgtatttg atattgaaat
    62641 caccttacct caagagaaat caggggtcat tgcgacaagt gcacactggc ttcataaaca
    62701 aggtcataaa gcttcatttg aaagtagaag tttcttattt aaagctattt ttaatattac
    62761 aaagttacta catattaaaa gaagcaaaac aatattattc acatcagatt cgcgtccgaa
    62821 tttatcaggg aatttcaagt atgtatatga tgagttacta cgccaaaaag tagattttga
    62881 ttatgatatt aaaacggtat ttaaggagaa tattacggat agacgcaaat ggagagacaa
    62941 gtttagattg ccatatttac ttggtaaggc cgattatatt tttgttgatg atttccatcc
    63001 attaatttat acggttcgct ttagaccatc acaagaaatt attcaagtgt ggcatgctgt
    63061 tggtgccttt aaaacagttg gctttagtcg tacaggtaaa aaaggtggtc cgtttatcga
    63121 ttcattaaac catcgtagtt acacgaaagc atatgtttca tcagaaaccg atattccatt
    63181 ttatgctgaa gcatttggaa ttagagaaga aaatgttgta ccaacaggtg taccacgtac
    63241 tgatgtacta tttgatgaag cttatgcaac acaaattaaa caagagatgg aagatgaatt
    63301 gccaattata aaaggtaaga aagttattct attcgcaccg acatttagag gtaatggtca
    63361 cggtacggca cattatccat tttttaaaat tgattttgaa cgtttagcaa gatactgcga
    63421 gaagcataat gcagttgtgt tattcaaaat gcatccgttc gtaaaaaata gacttaatat
    63481 ttcacgtgaa catagacaat actttatcga tgtgtcagat catcgtgaag ttaacgatat
    63541 tctctttgtt acagacttgt tgattagtga ttattcatct ttaatatatg aatatgcagt
    63601 atttaaaaag ccgatgattt tctatgcatt tgacttagaa gattacatta cgacgcgtga
    63661 tttctatgaa ccatttgaat catttgttcc aggtaaaatt gtacagtcct ttgatgcatt
    63721 aatggatgct ttggacaatg aagattatga ggttgaaaaa gttgtgccat tcttagataa
    63781 acattttaaa tatcaagatg gtcgctcaag tgaacgttta gtcaaagatt tgtttagacg
    63841 ctaatgttgg catatattac ttgccatgca aatgagtcat aaggcatagt tttcaagaag
    63901 ggttctgaca atgaagtgag caacatgtca tgatgagaag caggactata caatgagaat
    63961 aaccttttga tttttcatgc ataaggcgat tcaatcaaaa gcaatcacct tccaactgaa
    64021 ttgtcatttt gtaaaataaa ataatcgatc caatcgttat ctaattcata aatgtgtaaa
    64081 cacatacgtt atgaatggat aacgattttt tgttatgtta aagtggtaca ttaatcatgt
    64141 atttcgtatg ataattaacg acaagtgtaa tggttaaatg tattttatga tgaaatgcta
    64201 taataggcat ggttacaatg agcttgctca tacatattaa tataattaca aaaacacgtc
    64261 ggaggtacga catgattaaa aatacaatta aaaaattgat agaacatagt atatatacga
    64321 cttttaaatt actatcaaaa ttgccaaaca agaatctaat ttattttgaa agctttcatg
    64381 gtaaacaata cagcgacaac cccaaagcat tatatgaata cttaactgaa catagcgatg
    64441 cccaattaat atggggtgtg aaaaaaggat atgaacacat attccaacag cacaatgtac
    64501 catatgttac aaagttttca atgaaatggt ttttagcgat gccaagagcg aaagcgtgga
    64561 tgattaacac acgtacacca gattggttat ataaatcacc gcgaacgacg tacttacaaa
    64621 catggcatgg cacgccatta aaaaagattg gtttggatat tagtaacgtt aaaatgctag
    64681 gaacaaatac tcaaaattac caagatggct ttaaaaaaga aagccaacgg tgggattatc
    64741 tagtgtcacc taatccatat tcgacatcga tatttcaaaa tgcatttcat gttagtcgag
    64801 ataagatttt ggaaacaggt tatccaagaa atgataaatt atcacataaa cgcaatgata
    64861 ctgaatatat taatggtatt aagacaagat taaatattcc attagataaa aaagtgatta
    64921 tgtacgcgcc aacttggcgt gacgatgaag cgattcgaga aggttcatat caatttaatg
    64981 ttaactttga tatagaagct ttgcgtcaag cgctggatga tgattatgtt attttattac
    65041 gcatgcatta tttagttgtg acacgtattg atgaacatga tgattttgtg aaagacgttt
    65101 cagattatga agacatttcg gatttatact taatcagcga tgcgttagtt accgactact
    65161 catctgtcat gttcgacttc ggtgtattaa agcgtccgca aattttctat gcatatgact
    65221 tagataaata tggcgatgag cttagaggtt tttacatgga ttataaaaaa gagttgccag
    65281 gtccaattgt tgaaaatcaa acagcactca ttgatgcatt aaaacaaatc gatgagactg
    65341 caaatgagta tattgaagca cgaacggtat tttatcaaaa attctgttca ttagaagatg
    65401 gacaagcgtc acaacgaatt tgccaaacga tttttaagtg ataacttaaa aacaataaaa
    65461 aattataaat taattagtta agtgatataa ataataaacg aaatgtttgc ttgtatgtta
    65521 ttatttgtgt atgaaaacgt ctgatataat gtaatatagg tttaaacaaa atatgctaaa
    65581 atataagcaa aatatgtata attttaagta atacacagac atttagagtt ttgattttaa
    65641 aatgagtttt caattggaaa atgcaacgaa atttaaataa ttaaatatag atatagttga
    65701 atggaggaag tattttatga aatacgctgg t
//
LOCUS       DALPQQ010000003        53050 bp    DNA     linear   BCT 22-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus strain K18-6-464
            SAMD00233528-rid16434743.denovo.003, whole genome shotgun sequence.
ACCESSION   DALPQQ010000003 DALPQQ010000000
VERSION     DALPQQ010000003.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMD00233528
            Sequence Read Archive: DRR236061
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 53050)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 53050)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001543423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001543423.1
            Genome Coverage       :: 77x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/22/2022 17:09:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,811
            CDSs (total)                      :: 2,743
            Genes (coding)                    :: 2,689
            CDSs (with protein)               :: 2,689
            Genes (RNA)                       :: 68
            rRNAs                             :: 2, 4, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 4, 2 (16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 54
            CDSs (without protein)            :: 54
            Pseudo Genes (ambiguous residues) :: 0 of 54
            Pseudo Genes (frameshifted)       :: 27 of 54
            Pseudo Genes (incomplete)         :: 27 of 54
            Pseudo Genes (internal stop)      :: 10 of 54
            Pseudo Genes (multiple problems)  :: 10 of 54
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..53050
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMD00233528-rid16434743.denovo.003"
                     /strain="K18-6-464"
                     /db_xref="taxon:1280"
                     /geo_loc_name="Japan: Niigata"
     gene            20..925
                     /gene="yut"
                     /locus_tag="O7798_000121"
     CDS             20..925
                     /gene="yut"
                     /locus_tag="O7798_000121"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016266007.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="urea transporter"
                     /protein_id="HDC2862401.1"
                     /translation="MKIIDVLLKNISQVVLISNKWTGLFILIGLFVADWTIGLAAIVG
                     SIIAYTFARFINYSEAEINDGLAGFNPVLTAIALTIFLDKSGLDIVITMIATLLTLPV
                     AAAVREVLRPYKVPMLTMPFVIVTWFTILLSGQVKFVDTSLKLMPQNIETVNFSNNDR
                     IHFIQSLFEGFSQVFIEASVIGGVCILIGILIASRKATLLAVIASLLSFIIVALLGGN
                     YDDINQGLFGYNFVLMAIALGYTFKTAINPYISTFLGVLLTVVVQLGTTTLLEPFGLP
                     ALTLPFIIVTWILLFAGIKHDKVDA"
     gene            1142..2296
                     /locus_tag="O7798_000122"
     CDS             1142..2296
                     /locus_tag="O7798_000122"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000999191.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA/acyl-ACP dehydrogenase"
                     /protein_id="HDC2862402.1"
                     /translation="MNDMDNSFLITTEIQRKWIEKFKVIRDTFKAKAEYNDQHSQFSY
                     KNIEWLIKEGYGKLTLPKAYGGEGATIEDMVILQSFLGELDGATALSIGWHVSVVGQI
                     YEQKLWSQDMLEQFAVEINNGALVNRAVSEAEMGSPTRGGRPSTHAVKADDGYILNGV
                     KTYTSMSKALTHIIVAAYIEELESVGFFLVDRNLPGVEIADNWDVLGMRATESHDLIL
                     NDVKVPLKHLVETEKSKAPNGWILHIPSCYLGIAQAARNYAVDFAIQHSPNSIEGTIA
                     TLPTVQQNLGKMETLLLCARQFLWSTAKGYQQYKDDSQIRNPTSASKVMVMNQGLEVI
                     DLAMRIVGAKSLEMNRPLQRYYRDMRAGLHNPPMEDAAYTNIAKSITDTF"
     gene            2511..3419
                     /locus_tag="O7798_000123"
     CDS             2511..3419
                     /locus_tag="O7798_000123"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501016.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HDC2862403.1"
                     /translation="MKKLLLPLIIMLLVLAACGNQGEKNNKAETKSYKMDDGKTVDIP
                     KDPKRIAVVAPTYAGGLKKLGANIVAVNQQVDQSKVLKDKFKGVTKIGDGDVEKVAKE
                     KPDLIIVYSTDKDIKKYQKVAPTVVVDYNKHKYLEQQEMLGKIVGKEDKVKAWKKDWE
                     ETTAKDGKEIKKAIGQDATVSLFDEFDKKLYTYGDNWGRGGEVLYQAFGLKMQPEQQK
                     LTAKAGWAEVKQEEIEKYAGDYIVSTSEGKPTPGYESTNMWKNLKATKEGHIVKVDAG
                     TYWYNDPYTLDFMRKDLKEKLIKAAK"
     gene            3818..4759
                     /locus_tag="O7798_000124"
     CDS             3818..4759
                     /locus_tag="O7798_000124"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501015.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleoside hydrolase"
                     /protein_id="HDC2862404.1"
                     /translation="MTKKVYFNHDGGVDDLVSLFLLLQMENVQLIGVSTIGADCYLEP
                     SLSASVKIINRFSNEDIQVAPSYERGKNPFPKEWRMHAFFMDALPILNEPVKHVASNV
                     SDKEAFEDIIQTLKRQSEKVTLLFTGPLTDLAKALQKDSSIVQYIEKLVWMGGTFLPK
                     GNVEEPEHDGSAEWNAYWDPEAVKIVFDSDIEIDMVALESTNQVPLTLDVRQRWANER
                     QYTGIDFLGVSYAAVPPLTHFITNSTYFLWDVLTTAYIGNKDLVHSIEKKVDVISYGP
                     SQGKTFECKDGRKINVINHVDNNAFFDYITALAKKVN"
     gene            4880..5434
                     /locus_tag="O7798_000125"
     CDS             4880..5434
                     /locus_tag="O7798_000125"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501014.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="biotin transporter BioY"
                     /protein_id="HDC2862405.1"
                     /translation="MTTKQLVYTALMTAIIAILGLVPVIPLPFSSVPIVLQNIGIFLA
                     GVILGRKYGTLSVIVFLLLVVAGLPLLSGGRGGIGVFAGPSAGFLLLYPVVAFMIGAI
                     RDRFINEINFWILFVGILVFGVIALDVIGTLIMGMIINIPFTKAISISLAYLPGDILK
                     ALVASLIGTALLNHSQFRQIMGIK"
     gene            5506..6276
                     /locus_tag="O7798_000126"
     CDS             5506..6276
                     /locus_tag="O7798_000126"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501013.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HDC2862406.1"
                     /translation="MASISMSDIYCNGTIFENDDEQLIYLTPSFPQRYTSNTWIYKKT
                     PTQERWLKDLERQHQLHTNQGSNHYAFSFPENEQLDNHWMAMFKDMNFELGIMELYAI
                     ESDALANLPRNSDVEIAIVDESHIDAYLKVAYQFSLPFGKDYADAHEEMVREHYQKDV
                     IKRLVAYLNNEPIGVVDVIESENYIELDGFGVLEQFRHQGIGSTIQSLIGEYAISKNH
                     KPIILVADGEDTAKDMYAKQGYVYQSFCYQILKEDIGN"
     gene            complement(6448..7245)
                     /gene="fdhD"
                     /locus_tag="O7798_000127"
     CDS             complement(6448..7245)
                     /gene="fdhD"
                     /locus_tag="O7798_000127"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501012.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="formate dehydrogenase accessory
                     sulfurtransferase FdhD"
                     /protein_id="HDC2862407.1"
                     /translation="MNKDVSLGQPIVRYEDGKLFNTTDQYVTEFPLTIMVNGEEFATV
                     ICSPTNLEELVIGFLASEGAILKRDELKSVLIDDSKGFAHVELNKDLGDRFQYSTKRM
                     IASCCGKSREFYFQNDAAIAKTSMSKITLTPMQIINMMTRLQSASHIYQETGGLHNAA
                     ISDGLTFFVHRQDIGRHNALDKLYGFCIQRHITVRDKVLIFSGRISSEILIKAAKIGV
                     GVILSKSAPTTLAVTLANDLNITAVGFIRNGGFNIYSHPERIIDSEQ"
     gene            7535..8317
                     /gene="modA"
                     /locus_tag="O7798_000128"
     CDS             7535..8317
                     /gene="modA"
                     /locus_tag="O7798_000128"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501011.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdate ABC transporter substrate-binding
                     protein"
                     /protein_id="HDC2862408.1"
                     /translation="MKLKRLFAVVIAMLLVLAGCSNSNDNNESKKDDADNGKKQEIQV
                     AAAASLTDVTKKLASEFKKEHKNADIKFNYGGSGALRKQIESGAPVDVFMSANTKDVD
                     ALKDKNKAHDTYKYAKNSLVLIGDKDSNYTSVKDLKDNDKLALGEVKTVPAGKYAKQY
                     LDNNNLFKEVESKIVYAKDVKQVLNYVEKGNAKQGFVYKTDLYKQNKKIDTVKVIKEV
                     ELKKPITYEAGATSDSKLAKEWMEFLKSDKAKEILKEYHFAA"
     gene            8331..9002
                     /gene="modB"
                     /locus_tag="O7798_000129"
     CDS             8331..9002
                     /gene="modB"
                     /locus_tag="O7798_000129"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501010.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdate ABC transporter permease subunit"
                     /protein_id="HDC2862409.1"
                     /translation="MPDLTPFWISIRVAVISTIIVTVLGIFISKWLYRRKGSWVKVLE
                     SLLILPIVLPPTVLGFILLIIFSPRGPIGQFFANVLHLPVVFTLTGAVIASVIVSFPL
                     MYQHTVQGFRGIDTKMINTARTMGASETKIFLKLILPLAKRSILAGIMMSFARALGEF
                     GATLMVAGYIPNKTNTLPLEIYFLVEQGRENEAWLWVLVLVAFSIVVISTINLLNKDK
                     YKEVD"
     gene            9003..9608
                     /locus_tag="O7798_000130"
     CDS             9003..9608
                     /locus_tag="O7798_000130"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501009.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HDC2862410.1"
                     /translation="MLKINVKYQLKNTLIRINIDDTEPKIYAVRGPSGIGKTTVLNMI
                     AGLRKADEAIIEVNGQLLTDTAKNVNVKIQQRRIGYLFQDYQLFPNMTVYKNITFMAE
                     PSEHIDQLIQTLNIDHLMKQYPMTLSGGEAQRVALARALSTKPDLILLDEPFSSLDDT
                     TKDESITLVKRIFNEWQIPIIFVTHSNYEAEQMAHEIITIG"
     gene            9778..10782
                     /locus_tag="O7798_000131"
     CDS             9778..10782
                     /locus_tag="O7798_000131"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501008.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ThiF family adenylyltransferase"
                     /protein_id="HDC2862411.1"
                     /translation="MSQERYSRQILFKQIGEIGQSKINQKCALIIGMGALGTHVAEGL
                     VRAGIAKLIIVDRDYIEFSNLQRQTLFTEEDALKMMPKVVAAKKHLLALRSDVDIDDY
                     IAHVDYYFLETHGQDVDVIIDATDNFETRQLINDFAYKYRIPWIYGGVVQSTYTEAAF
                     IPGKTPCFNCLVPQLPALNLTCDTVGVIQPAVTMATSLQLRDAMKVLTEQPIDTKITY
                     GDIWEGSHYSFGFSKMQRSDCTTCGDVPSYPYLNKNEQRYATLCGRDTVQYENASITH
                     DILVQFLKQHQLNYRSNSYMVMFEFKGHRIVAFKGGRFLIHGMTRTSDATHLMNLLFG
                     "
     gene            10813..11319
                     /locus_tag="O7798_000132"
     CDS             10813..11319
                     /locus_tag="O7798_000132"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501007.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdenum cofactor biosynthesis protein MoaB"
                     /protein_id="HDC2862412.1"
                     /translation="MGEHQNVKLNRTVKAAVLTVSDTRDFDTDKGGQCVRQLLQADDV
                     EVSDAHYTIVKDEKVAITTQVKKWLEEDIDVIITTGGTGIAQRDVTIEAVKPLLTKEI
                     EGFGELFRYLSYVEDVGTRALLSRAVAGTVNNKLIFSIPGSTGAVKLALEKLIKPELN
                     HLIHELTK"
     gene            complement(11321..11815)
                     /gene="moaC"
                     /locus_tag="O7798_000133"
     CDS             complement(11321..11815)
                     /gene="moaC"
                     /locus_tag="O7798_000133"
                     /EC_number="4.6.1.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501006.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cyclic pyranopterin monophosphate synthase MoaC"
                     /protein_id="HDC2862413.1"
                     /translation="MTEFTHINQQGHAKMVDVSDKQITKRTAVAHSSITVNETIFKQI
                     SNNTNTKGNVLNTAQIAGIMAAKNTSTLIPMCHPLPLTGIDVHFSWDETNAPLYTLNI
                     QTTVSTTGKTGVEMEALTAASATALTIYDMTKAVDKGMIIGETYLESKSGGKSGDFQR
                     QSNQ"
     gene            11878..13137
                     /locus_tag="O7798_000134"
     CDS             11878..13137
                     /locus_tag="O7798_000134"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501005.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin molybdotransferase MoeA"
                     /protein_id="HDC2862414.1"
                     /translation="MVVEKRNPIPVKEAIQRIVNQQSSMPAITVALEKSLNHILAEDI
                     VATYDIPRFDKSPYDGFAIRSVDSQGASGQNRIEFKVIDHIGAGSVSDKLVGDHEAVR
                     IMTGAQIPNGADAVVMFEQTIELEDTFTIRKPFSKNENISLKGEETKTGDVVLKKGQV
                     INPGAIAVLATYGYAEVKVIKQPSVAVIATGSELLDVNDVLEDGKIRNSNGPMIRALA
                     EKLGLEVGIYKTQKDDLDSGIQVVKEAMEKHDIVITTGGVSVGDFDYLPEIYKAVKAE
                     VLFNKVAMRPGSVTTVAFVDGKYLFGLSGNPSACFTGFELFVKPAVKHMCGALEVFPQ
                     IIKATLMEDFTKANPFTRFIRAKATLTSAGATVVPSGFNKSGAVVAIAHANCMVMLPG
                     GSRGFKAGHTVDIILTESDAAEEELLL"
     gene            13134..13619
                     /gene="mobB"
                     /locus_tag="O7798_000135"
     CDS             13134..13619
                     /gene="mobB"
                     /locus_tag="O7798_000135"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501004.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin-guanine dinucleotide biosynthesis
                     protein B"
                     /protein_id="HDC2862415.1"
                     /translation="MILQIVGYKKSGKTTLMRHIVSFLKSHGYTVATIKHHGHGKEDI
                     QLQDSDVDHMKHFEAGADQSIVQGFQYQQTVTRVDNQNLTQIIEKSVTIDTNIVLVEG
                     FKNADFEKVVVYRNEEELQVLQQLSNVCYSINVREHEDFTAFEQWLLNKIKNDCDTQL
                     T"
     gene            13633..14079
                     /locus_tag="O7798_000136"
     CDS             13633..14079
                     /locus_tag="O7798_000136"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501003.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdenum cofactor biosynthesis protein MoaE"
                     /protein_id="HDC2862416.1"
                     /translation="MKQFEIVTEPIQTEQYREFTINEYQGAVVVFTGHVREWTKGVKT
                     EYLEYEAYIPMAEKKLAQIGDEINEKWPGTITSIVHRIGPLQISDIAVLIAVSSPHRK
                     DAYRANEYAIERIKEIVPIWKKEIWEDGSKWQGHQKGNYEEAKREE"
     gene            14085..14318
                     /gene="moaD"
                     /locus_tag="O7798_000137"
     CDS             14085..14318
                     /gene="moaD"
                     /locus_tag="O7798_000137"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501002.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin converting factor subunit 1"
                     /protein_id="HDC2862417.1"
                     /translation="MKVLYFAEIKDILQKAQEDIVLEQALTVQQFEDLLFERYPQINN
                     KKFQVAVNEEFVQKSDFIQPNDTVALIPPVSGG"
     gene            14325..14924
                     /gene="mobA"
                     /locus_tag="O7798_000138"
     CDS             14325..14924
                     /gene="mobA"
                     /locus_tag="O7798_000138"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501001.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdenum cofactor guanylyltransferase MobA"
                     /protein_id="HDC2862418.1"
                     /translation="MKAIILAGGHSVRFGKPKAFAEVNGETFYSRVIKTLESTNMFNE
                     IIISTNAQLATQFKYPNVVIDDENHNDKGPLAGIYTIMKQHPEEELFFVVSVDTPMIT
                     GKAVSTLYQFLVSHLIENHLDVAAFKEDGRFIPTIAFYSPNALGAITKALHSDNYSFK
                     NVYHELSTDYLDVRDVDAPSYWYKNINYQHDLDALIQKL"
     gene            14944..15966
                     /gene="moaA"
                     /locus_tag="O7798_000139"
     CDS             14944..15966
                     /gene="moaA"
                     /locus_tag="O7798_000139"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501000.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GTP 3',8-cyclase MoaA"
                     /protein_id="HDC2862419.1"
                     /translation="MVEQIKDKLGRPIRDLRLSVTDRCNFRCDYCMPKEVFGDDFVFL
                     PKNELLTFDEMARIAKVYAELGVKKIRITGGEPLMRRDLDVLIAKLNQIDGIEDIGLT
                     TNGLLLKKHGQKLYDAGLRRINVSLDAIDDTLFQSINNRNIKATTILEQIDYATSIGL
                     NVKVNVVIQKGINDDQIIPMLEYFKDKHIEIRFIEFMDVGNDNGWDFSKVVTKDEMLT
                     MIEQHFEIDPVEPKYFGEVAKYYRHKDNGVQFGLITSVSQSFCSTCTRARLSSDGKFY
                     GCLFATVDGFNVKAFIRSGVTDEELKEQFKALWQIRDDRYSDERTAQTVANRQRKKIN
                     MNYIGG"
     gene            complement(16361..16531)
                     /locus_tag="O7798_000140"
     CDS             complement(16361..16531)
                     /locus_tag="O7798_000140"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500997.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDC2862420.1"
                     /translation="MFRFISFGQLVVYSTTFIPKKDILQLNGMECDINVKEPLKIYYV
                     VILKSGIEMIFS"
     gene            16657..17007
                     /gene="sarV"
                     /locus_tag="O7798_000141"
     CDS             16657..17007
                     /gene="sarV"
                     /locus_tag="O7798_000141"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500996.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HTH-type transcriptional regulator SarV"
                     /protein_id="HDC2862421.1"
                     /translation="MSNKVQRFIEAERELSQLKHWLKTTHKISIEEFVVLFKVYEAEK
                     ISGKELRDTLHFEMLWDTSKIDVIIRKIYKKELISKLRSETDERQVFYFYSTSQKKLL
                     DKITKEIEVLSVTN"
     gene            complement(17109..18320)
                     /locus_tag="O7798_000142"
     CDS             complement(17109..18320)
                     /locus_tag="O7798_000142"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500995.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HDC2862422.1"
                     /translation="MTNQGSLNKSPIFTKSFTINFLVNFIVYLCMYLLLVVIAGYSKQ
                     AFDASDSLAGLVVGLFIVGSLIGRFATGKFVNQIGPKRLLFIGLIALIITQLLYFIDG
                     SLAFLIFVRLINGIATAVVTTATGTIAAYVTPVNRKSEGISLFSLSLVLGTAIGPFLG
                     MLLITKYAIDLLFIICVILGILGLIISLFIKVDFEVTNNKTETNVIDKPRFSIHQFIA
                     KEAIPVAVIMLLIGVTYASILTYLQAFALERHLVTAASYFFICYAIASLITRPIAGRL
                     MDDKNENIIVYPAFIMLFLSFVCLISSYQSWLILLAGACLGLGYGNLSSAMQSIAIKV
                     SPPIKYGIATSTFYVGLDAGVGFGPSFLGLFTHMFSYSEIFGFMAALAIITMLVYFLI
                     HGRHVTRNAMN"
     gene            complement(18313..18753)
                     /locus_tag="O7798_000143"
     CDS             complement(18313..18753)
                     /locus_tag="O7798_000143"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500994.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="winged helix DNA-binding protein"
                     /protein_id="HDC2862423.1"
                     /translation="MLSQEFFNSFITIYRPYLKLAEPILEKHNIYYGQWLILRDIAKH
                     QPTTLIEISHRRAIEKPTARKTLKALIENDLITVENSLEDKRQKFLTLTPKGHELYEI
                     VCLDVQKLQQAVVAKTNISQDQMQETINVMNQIHEILLKEAHND"
     gene            18915..19679
                     /locus_tag="O7798_000144"
     CDS             18915..19679
                     /locus_tag="O7798_000144"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500993.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HDC2862424.1"
                     /translation="MILKFDHIIHYIDQLDRFSFPGDVIKLHSGGYHHKYGTFNKLGY
                     INENYIELLDVENNEKLKKMAKTIEGGVAFATQIVQEKYEQGFKNICLRTNDIEAVKN
                     KLQSEQVEVVGPIQMERDTHKDGKVKWQLLYIMNQDDDEIKPPFFIQWEERDSMRTKK
                     LQKYFQKQFSIETVIVKSKNRSQTVSNWLKWFDMDIVEENDHYTDLILKNDDIYFRIE
                     DGKVSKYHSVIIKDAQATSPYSIFIRGAIYRFEPLV"
     gene            complement(19671..19922)
                     /locus_tag="O7798_000145"
     CDS             complement(19671..19922)
                     /locus_tag="O7798_000145"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500992.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDC2862425.1"
                     /translation="MRTIILSLFIIMNIVAIIMTLSQPLTVNYFSLRVILIFFTFILS
                     IFFILIKSSRLNNILTILSIVLVIIHMGILAHSTYVYLY"
     gene            20311..21576
                     /gene="femX"
                     /locus_tag="O7798_000146"
                     /gene_synonym="fmhB"
     CDS             20311..21576
                     /gene="femX"
                     /locus_tag="O7798_000146"
                     /gene_synonym="fmhB"
                     /EC_number="2.3.2.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500991.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipid II:glycine glycyltransferase"
                     /protein_id="HDC2862426.1"
                     /translation="MEKMHITNQEHDAFVKSHPNGDLLQLTKWAETKKLTGWYARRIA
                     VGRDGEVQGVAQLLFKKVPKLPYTLCYISRGFVVDYSNKEALNALLDSAKEIAKAEKA
                     YAIKIDPDVEVDKGTDALQNLKALGFKHKGFKEGLSKDYIQPRMTMITPIDKNDDELL
                     NSFERRNRSKVRLALKRGTTVERSDREGLKTFAELMKITGERDGFLTRDISYFENIYD
                     ALHEDGDAELFLVKLDPKENIAKVNQELNELHAEIAKWQQKMKTSEKQAKKAQNMIND
                     AQNKIAKNEDLKRDLEALEKEHPEGIYLSGALLMFAGSKSYYLYGASSNEFRDFLPNH
                     HMQYTMMKYAREHGATTYDFGGTDNDPDKDSEHYGLWAFKKVWGTYLSEKIGEFDYVL
                     NQPLYQLIEQVKPRLTKAKIKISRKLKRK"
     gene            21693..24860
                     /locus_tag="O7798_000147"
     CDS             21693..24860
                     /locus_tag="O7798_000147"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500990.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter permease subunit"
                     /protein_id="HDC2862427.1"
                     /translation="MIKKLLQFSLGNKFAIFLMVVLVVLGGVYASAKLKLELLPNVQN
                     PVISVTTTMPGATPQSTQDEISSKIDNQVRSLAYVKNVKTQSIQNASIVTVEYENNTD
                     MDKAEEQLKKEIDKIKFKDEVGQPELRRNSMDAFPVLAYSFSNKENDLKKVTKVLNEQ
                     LIPKLQTVDGVQNAQLNGQTNREITLKFKQNELEKYGLTADDVENYLKTATRTTPLGL
                     FQFGDKDKSIVVDGQYQSVDAFKNINIPLTLAGGQGQSQSQSDNKQNSAMSDVNQASP
                     QQNSKASAPNNISGMPTAKLGDLADITVGDVRTSISKTNGKDAVNLQITKAQDANTVQ
                     VAKDVQRKIDTFVDENKDFNVTKTMDTAKPVEKSLYTMVEKASLGTIVAIIVILLFLR
                     NIRTTAISIISIPLSLLMALIALKLSDVSLNILTLGALTVAIGRVIDDSIVVVENIYR
                     RLTDSEEQLKGENLIISATTEVFKPIMSSTLVTIIVFLPLVFVSGSVGEMFRPFALAI
                     AFSLLASLLVSITLVPALAATLFKKGVKRRNKQHQEGLGVVSTTYKKVLHWSLNHKWI
                     VIILSTLILVATIVFGGPRLGTSFISAGDDKFLAITYTPKPGETEQAVLNHAKDVEKY
                     LKQKKHVKTIQYSVGGSSPVDPTGSTNSMAIMVEYDNDTPNFDVEADKVIKHADGFKH
                     PGEWKNQDLGTGAGNKSVEVTVKGPSMDAIKSTVKDIEQKMKQVKGLANVKSDLSQTY
                     DQYEIKVDQNKAAENGISASQLAMHLNENLPEKTVTTVKENGKTVDVKVKQNKQTDWS
                     EDKLNNITLKKPTGGTIKLGDIATLVKTTTPSKLTQEQGDYATTVSAKVTNKDVGGTT
                     RQVMSKINNLDKPNNVKVNIGGASDDINNAMTQLAFAMLAAIIIVYLILVITFKGGLA
                     PFTILFSLPFTVIGVIIALLITGETISVPSLIGMLMLIGIVVTNAIVLIDRVINNEQQ
                     GMEMKEALIEAGGTRIRPILMTAIATIGALVPLLFGQDSSILISKGLAATVIGGLISS
                     TLLTLVVVPVIYEILFTLKKRFTKR"
     gene            complement(25047..25364)
                     /gene="mspA"
                     /locus_tag="O7798_000148"
     CDS             complement(25047..25364)
                     /gene="mspA"
                     /locus_tag="O7798_000148"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500989.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="membrane stabilizing protein MspA"
                     /protein_id="HDC2862428.1"
                     /translation="MQFYLILLAILYLIVSFISIFKMEVVFTRILRIIMGVLLLFVLA
                     LTTMSFPKENWWVFIVLLLLVGNVEVTGFKMLKKDLKGVNILNLMSLFIFVIYFILTI
                     VLF"
     gene            complement(25609..25773)
                     /locus_tag="O7798_000149"
     CDS             complement(25609..25773)
                     /locus_tag="O7798_000149"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500988.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDC2862429.1"
                     /translation="MSLENQLAELKYDYVRLQGDIEKRESLNLDTSALVRQLKDIENE
                     IRNVRAQMQD"
     gene            25906..26814
                     /locus_tag="O7798_000150"
     CDS             25906..26814
                     /locus_tag="O7798_000150"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002487080.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AEC family transporter"
                     /protein_id="HDC2862430.1"
                     /translation="MTEQFTMIILLIALGYFLKRINFIKATDSQVIATLVLNVTLPSL
                     VIVNLNSAELKLSFSILPILMIIYGIVAKMIAVWFFRKYDNHMRGSVGMMTGAMNIGL
                     FAYPLIEVIWPKTGLIYFVMADIGGAFVMFGITYFVGSYFSEGSDQFDFKYLGKKLLQ
                     SVPLVTYIVMFILNISHIHLPHVAIDFFSILSHANMPLSMILLGVMLNFTLERKYIPA
                     TIKYLCLHYGLALVAGLLVYVLLPVSDDMIKTTLLVTWMFPVGVAIISYGIQFKYRTL
                     PFIGMTTNLTIIISIIILYVYQAVFV"
     gene            26985..27116
                     /locus_tag="O7798_000151"
     CDS             26985..27116
                     /locus_tag="O7798_000151"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500986.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDC2862431.1"
                     /translation="MYGAYLIYEYHQDFKSIANFKVLKRMINVMMCYCVLFLEPRIS"
     gene            complement(27233..28096)
                     /locus_tag="O7798_000152"
     CDS             complement(27233..28096)
                     /locus_tag="O7798_000152"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500985.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucose uptake protein GlcU"
                     /protein_id="HDC2862432.1"
                     /translation="MQFLDFLIALLPALFWGSVVLINVFVGGGPYNQIRGTTLGALIV
                     GLGLLITGFAKFNNPTVIIVGLISGALWAFGQANQLKSISLIGVSNTMPVSTGMQLVG
                     TTLFSVIFLGEWSSMTQIIFGLIAMILLVTGVALTSLKAKNERQSDNPEFKKAMGILI
                     VSTVGYVGFVVLGDIFGVGGTDALFFQSVGMAIGGFILSMNHKTSLKSTALNLLPGVI
                     WGIGNLFMFYSQPKVGVATSFSLSQLLVIVSTLGGIFILGERKDRRQMTGIWAGIIII
                     VIAAIILGNLK"
     gene            complement(28277..29164)
                     /locus_tag="O7798_000153"
     CDS             complement(28277..29164)
                     /locus_tag="O7798_000153"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500984.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HDC2862433.1"
                     /translation="MSIVQLYDITQIKSFIEHSNYESASYLYKLPQQYNEIDVLITDA
                     IESPGVFSIKENDSIKAIILSFAYDKNKFKVIGPFVADNYVLSVDTFETLFKAMTSNQ
                     PDDAVFNFSFEEGIQQYKPLMKVIQASYNFTDYYIEARTRLEEDMHQPNIIPYHKGFY
                     RAFSKLHTTTFKYQAQSPQDIIDSLDDHHHLFLFVSEGLLKGYLYLEIDSQQSIAEIK
                     YFSSHVDYRLKGIAFELLAYALQYAFDNFDIRKVYFKIRNKNNKLIERFNGLGFHINY
                     EYIKFKFESRNVKDQTIPE"
     gene            29230..29325
                     /locus_tag="O7798_000154"
     CDS             29230..29325
                     /locus_tag="O7798_000154"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500983.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDC2862434.1"
                     /translation="MILTCYNTFNTSFAIIEFKSKISGIDEARSK"
     gene            29351..31486
                     /locus_tag="O7798_000155"
     CDS             29351..31486
                     /locus_tag="O7798_000155"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500982.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA topoisomerase III"
                     /protein_id="HDC2862435.1"
                     /translation="MKSLILAEKPSVARDIADALQINQKRNGYFENNQYIVTWALGHL
                     VTNATPEQYDKNLKEWRLEDLPIIPKYMKTVVIGKTSKQFKTVKALILDNKVKDIIIA
                     TDAGREGELVARLILDKVGNKKPIRRLWISSVTKKAIQQGFKNLKDGRQYNDLYYAAL
                     ARSEADWIVGINATRALTTKYDAQLSLGRVQTPTIQLVNTRQQEINQFKPQQYFTLSL
                     TVKGFDFQLESNQRYTNKETLEQMVNNLKNVDGKIKSVATKHKKSYPQSLYNLTDLQQ
                     DMYRRYKIGPKETLNTLQSLYERHKVVTYPRTDSNYLTTDMVDTMKERIQATMATTYK
                     DQARPLMSKTFSSKMSIFNNQKVSDHHAIIPTEVRPVMSDLSNRELKLYDMIVERFLE
                     ALMPPHEYDAITVTLEVAGHTFVLKENVTTVLGFKSIRQGESITEMQQPFSEGDEVKI
                     SKTNIREHETTPPEYFNEGSLLKAMENPQNFIQLKDKKYAQTLKQTGGIGTVATRADI
                     IDKLFNMNAIESRDGKIKVTSKGKQILELAPEELTSPLLTAQWEEKLLLIERGKYQAK
                     TFINEMKDFTKDVVNGIKNSDRKYKHDNLTTTECPTCGKFMIKVKTKNGQMLVCQDPS
                     CKTKKNVQRKTNARCPNCKKKLTLFGKGKEAVYRCVCGHSETQAHMDQRMKSKSSGKV
                     SRKEMKKYMNKNEGLDNNPFKDALKNLNL"
     gene            31599..32933
                     /locus_tag="O7798_000156"
     CDS             31599..32933
                     /locus_tag="O7798_000156"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000800694.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NCS2 family permease"
                     /protein_id="HDC2862436.1"
                     /translation="MKNYFQFDKYGTNFKREILGGITTFLSMAYILAVNPQVLSLAGV
                     KGVSEDMKMDQGAIFVATALAAFVGSLFMGLIAKYPIALAPGMGLNAFFAFTVVLTMG
                     IPWQVGLTGVLFSGIFFAILTVTGFREVIINAIPYQMKMAVSAGIGLFITFVGLQSSG
                     IIVKNESTLVTLGHLTDPPVLLAIFGIVITVILYAIKLPGSIFIGMIITAIVGMFTGL
                     IQMPSGIVGKIPSIEPTFGAAFEAFKDPSQLLTIQFLIVILTFLFIDFFDTAGTLVAV
                     ATQAGIMKDNKLPRAGRALFSDSLATIVGSVFGTTTTTSYIESTSGVAVGARTGFASI
                     VTGCCFLLALFFSPLIAVVTSAVTTPALVVVGVLMAANFAEINWKSFEVAVPAFITII
                     MMPLSYSIATGIACGFIFYPITMLISKKHKEVHPIMYVLMVLFILYFIFVHG"
     gene            complement(33125..33514)
                     /locus_tag="O7798_000157"
     CDS             complement(33125..33514)
                     /locus_tag="O7798_000157"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500980.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDC2862437.1"
                     /translation="MKNGPKLSLALIGIFLILCEFFYGIPFLGATFILSFGWQPLLFN
                     ALLYLILTIILLVNRQNAIRPIAIIPIFGIVGSFLAIIPFLGILIHWILFFLMILFVL
                     VVLSAPTYIPNKNARVIYTQYKDGHRE"
     gene            33871..34179
                     /gene="rpsJ"
                     /locus_tag="O7798_000158"
     CDS             33871..34179
                     /gene="rpsJ"
                     /locus_tag="O7798_000158"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001118669.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S10"
                     /protein_id="HDC2862438.1"
                     /translation="MAKQKIRIRLKAYDHRVIDQSAEKIVETAKRSGADVSGPIPLPT
                     EKSVYTIIRAVHKYKDSREQFEQRTHKRLIDIVNPTPKTVDALMGLNLPSGVDIEIKL
                     "
     gene            34207..34869
                     /gene="rplC"
                     /locus_tag="O7798_000159"
     CDS             34207..34869
                     /gene="rplC"
                     /locus_tag="O7798_000159"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000160215.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L3"
                     /protein_id="HDC2862439.1"
                     /translation="MTKGILGRKIGMTQVFGENGELIPVTVVEAKENVVLQKKTVEVD
                     GYNAIQVGFEDKKAYKKDAKSNKYANKPAEGHAKKADAAPKRFIREFRNVDVDAYEVG
                     QEVSVDTFVAGDVIDVTGVSKGKGFQGAIKRHGQSRGPMSHGSHFHRAPGSVGMASDA
                     SRVFKGQKMPGRMGGNTVTVQNLEVVQVDTENKVILVKGNVPGPKKGLVEIRTSIKKG
                     NK"
     gene            34896..35519
                     /gene="rplD"
                     /locus_tag="O7798_000160"
     CDS             34896..35519
                     /gene="rplD"
                     /locus_tag="O7798_000160"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015900976.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L4"
                     /protein_id="HDC2862440.1"
                     /translation="MANYDVLKLDGTKSGSIELSDAVFGIEPNNSVLFEAINLQRASL
                     RQGTHAVKNRSAVSGGGRKPWKQKGTGRARQGTIRAPQWRGGGIVFGPTPRSYAYKMP
                     KKMRRLALRSALSFKAQENGLTVVDAFNFEAPKTKEFKNVLSTLEQPKKVLVVTENED
                     VNVELSARNIPGVQVTTAQGLNVLDITNADSLVITEAAAKKVEEVLG"
     gene            35519..35794
                     /gene="rplW"
                     /locus_tag="O7798_000161"
     CDS             35519..35794
                     /gene="rplW"
                     /locus_tag="O7798_000161"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002506966.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L23"
                     /protein_id="HDC2862441.1"
                     /translation="MEARDILKRPVITEKSSEAMAEDKYTFDVDTRVNKTQVKMAVEE
                     IFNVKVASVNIMNYKPKKKRMGRYQGYTNKRRKAIVTLKEGSIDLFN"
     gene            35827..36660
                     /gene="rplB"
                     /locus_tag="O7798_000162"
     CDS             35827..36660
                     /gene="rplB"
                     /locus_tag="O7798_000162"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500976.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L2"
                     /protein_id="HDC2862442.1"
                     /translation="MAIKKYKPITNGRRNMTSLDFAEITKTTPEKSLLKPLPKKAGRN
                     NQGKLTVRHHGGGHKRQYRVIDFKRNKDGINAKVDSIQYDPNRSANIALVVYADGEKR
                     YIIAPKGLEVGQIVESGAEADIKVGNALPLQNIPVGTVVHNIELKPGKGGQIARSAGA
                     SAQVLGKEGKYVLIRLRSGEVRMILSTCRATIGQVGNLQHELVNVGKAGRSRWKGIRP
                     TVRGSVMNPNDHPHGGGEGRAPIGRPSPMSPWGKPTLGKKTRRGKKSSDKLIVRGRKK
                     K"
     gene            36727..37005
                     /gene="rpsS"
                     /locus_tag="O7798_000163"
     CDS             36727..37005
                     /gene="rpsS"
                     /locus_tag="O7798_000163"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000533765.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S19"
                     /protein_id="HDC2862443.1"
                     /translation="MARSIKKGPFVDEHLMKKVEAQEGSEKKQVIKTWSRRSTIFPNF
                     IGHTFAVYDGRKHVPVYVTEDMVGHKLGEFAPTRTFKGHVADDKKTRR"
     gene            37034..37387
                     /gene="rplV"
                     /locus_tag="O7798_000164"
     CDS             37034..37387
                     /gene="rplV"
                     /locus_tag="O7798_000164"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000387528.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L22"
                     /protein_id="HDC2862444.1"
                     /translation="MEAKAVARTIRIAPRKVRLVLDLIRGKNAAEAIAILKLTNKASS
                     PVIEKVLMSALANAEHNYDMNTDELVVKEAYANEGPTLKRFRPRAQGRASAINKRTSH
                     ITIVVSDGKEEAKEA"
     gene            37411..38064
                     /gene="rpsC"
                     /locus_tag="O7798_000165"
     CDS             37411..38064
                     /gene="rpsC"
                     /locus_tag="O7798_000165"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500973.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S3"
                     /protein_id="HDC2862445.1"
                     /translation="MGQKINPIGLRVGIIRDWEAKWYAEKDFASLLHEDLKIRKFIDN
                     ELKEASVSHVEIERAANRINLAIHTGKPGMVIGKGGSEIEKLRNKLNALTDKKVHINV
                     IEIKKVDLDARLVAENIARQLENRASFRRVQKQAITRAMKLGAKGIKTQVSGRLGGAD
                     IARAEQYSEGTVPLHTLRADIDYAHAEADTTYGKLGVKVWIYRGEVLPTKNTSGGGK"
     gene            38067..38501
                     /gene="rplP"
                     /locus_tag="O7798_000166"
     CDS             38067..38501
                     /gene="rplP"
                     /locus_tag="O7798_000166"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001829782.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L16"
                     /protein_id="HDC2862446.1"
                     /translation="MLLPKRVKYRRQHRPKTTGRSKGGNYVTFGEFGLQATTTSWITS
                     RQIESARIAMTRYMKRGGKVWIKIFPHTPYTKKPLEVRMGAGKGAVEGWIAVVKPGRI
                     LFEVAGVSEEVAREALRLASHKLPVKTKFVKREELGGETNES"
     gene            38491..38700
                     /gene="rpmC"
                     /locus_tag="O7798_000167"
     CDS             38491..38700
                     /gene="rpmC"
                     /locus_tag="O7798_000167"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002509269.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L29"
                     /protein_id="HDC2862447.1"
                     /translation="MKAKEIRDLTTSEIEEQIKSSKEELFNLRFQLATGQLEETARIR
                     TVRKTIARLKTVAREREIEQSKANQ"
     gene            38724..38987
                     /gene="rpsQ"
                     /locus_tag="O7798_000168"
     CDS             38724..38987
                     /gene="rpsQ"
                     /locus_tag="O7798_000168"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011983253.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S17"
                     /protein_id="HDC2862448.1"
                     /translation="MSERNDRKVYVGKVVSDKMDKTITVLVETYKTHKLYGKRVKYSK
                     KYKTHDENNSAKLGDIVKIQETRPLSATKRFRLVEIVEESVII"
     gene            39019..39387
                     /gene="rplN"
                     /locus_tag="O7798_000169"
     CDS             39019..39387
                     /gene="rplN"
                     /locus_tag="O7798_000169"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012727667.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L14"
                     /protein_id="HDC2862449.1"
                     /translation="MIQQETRLKVADNSGAREVLTIKVLGGSGRKTANIGDVIVCTVK
                     NATPGGVVKKGDVVKAVIVRTKSGVRRNDGSYIKFDENACVIIRDDKGPRGTRIFGPV
                     ARELREGNFMKIVSLAPEVL"
     gene            39423..39740
                     /gene="rplX"
                     /locus_tag="O7798_000170"
     CDS             39423..39740
                     /gene="rplX"
                     /locus_tag="O7798_000170"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500968.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L24"
                     /protein_id="HDC2862450.1"
                     /translation="MHIKKGDNVKVIAGKDKGKEGKVIATLPKKDRVVVEGVNIMKKH
                     QKPTQLNPEGGILETEAAIHVSNVQLLDPKTNEPTRVGYKFVDGKKVRIAKKSGEEIK
                     SNN"
     gene            39767..40306
                     /gene="rplE"
                     /locus_tag="O7798_000171"
     CDS             39767..40306
                     /gene="rplE"
                     /locus_tag="O7798_000171"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011275133.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L5"
                     /protein_id="HDC2862451.1"
                     /translation="MNRLKEKFNTEVTENLMKKFNYSSVMEVPKIDKIVVNMGVGDAV
                     QNSKVLDNAVEELELITGQKPLVTKAKKSIATFRLREGMPIGAKVTLRGERMYEFLDK
                     LISVSLPRVRDFQGVSKKAFDGRGNYTLGVKEQLIFPEIDYDKVSKVRGMDIVIVTTA
                     NTDEEARELLANFGMPFRK"
     gene            40329..40514
                     /locus_tag="O7798_000172"
     CDS             40329..40514
                     /locus_tag="O7798_000172"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011245027.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type Z 30S ribosomal protein S14"
                     /protein_id="HDC2862452.1"
                     /translation="MAKTSMVAKQQKKQKYAVREYTRCERCGRPHSVYRKFKLCRICF
                     RELAYKGQIPGVRKASW"
     gene            40546..40944
                     /gene="rpsH"
                     /locus_tag="O7798_000173"
     CDS             40546..40944
                     /gene="rpsH"
                     /locus_tag="O7798_000173"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000178880.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S8"
                     /protein_id="HDC2862453.1"
                     /translation="MTMTDPIADMLTRVRNANMVRHEKLELPASNIKKEIAEILKSEG
                     FIKNVEYVEDDKQGVLRLFLKYGQNDERVITGLKRISKPGLRVYAKASEMPKVLNGLG
                     IALVSTSEGVITDKEARKRNVGGEIIAYVW"
     gene            40969..41505
                     /gene="rplF"
                     /locus_tag="O7798_000174"
     CDS             40969..41505
                     /gene="rplF"
                     /locus_tag="O7798_000174"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001829740.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L6"
                     /protein_id="HDC2862454.1"
                     /translation="MSRVGKKIIDIPSDVTVTFDGNHVTVKGPKGELSRTLNERMTFK
                     QEENTIEVVRPSDSKEDRTNHGTTRALLNNMVQGVSQGYVKVLELVGVGYRAQMQGKD
                     LILNVGYSHPVEIKAEENITFSVEKNTVVKVEGISKEQVGALASNIRSVRPPEPYKGK
                     GIRYQGEYVRRKEGKTGK"
     gene            41536..41895
                     /gene="rplR"
                     /locus_tag="O7798_000175"
     CDS             41536..41895
                     /gene="rplR"
                     /locus_tag="O7798_000175"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011275136.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L18"
                     /protein_id="HDC2862455.1"
                     /translation="MISKIDKNKVRLKRHARVRTNLSGTAEKPRLNVYRSNKHIYAQI
                     IDDNKGVTLAQASSKDSDIATTATKVELATKVGEAIAKKAADKGIKEIVFDRGGYLYH
                     GRVKALAEAARESGLEF"
     gene            41916..42416
                     /gene="rpsE"
                     /locus_tag="O7798_000176"
     CDS             41916..42416
                     /gene="rpsE"
                     /locus_tag="O7798_000176"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016426364.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S5"
                     /protein_id="HDC2862456.1"
                     /translation="MARREEETKEFEERVVTINRVAKVVKGGRRFRFTALVVVGDKNG
                     RVGFGTGKAQEVPEAIKKAVEAAKKDLVVVPRVEGTTPHTITGRYGSGSVFMKPAAPG
                     TGVIAGGPVRAVLELAGITDILSKSLGSNTPINMVRATIDGLQNLKNAEDVAKLRGKT
                     VEELYN"
     gene            42433..42612
                     /gene="rpmD"
                     /locus_tag="O7798_000177"
     CDS             42433..42612
                     /gene="rpmD"
                     /locus_tag="O7798_000177"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001096577.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L30"
                     /protein_id="HDC2862457.1"
                     /translation="MAKLQITLTRSVIGRPETQRKTVEALGLKKTNSSVVVEDNPAIR
                     GQINKVKHLVTVEEK"
     gene            42629..43069
                     /gene="rplO"
                     /locus_tag="O7798_000178"
     CDS             42629..43069
                     /gene="rplO"
                     /locus_tag="O7798_000178"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500960.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L15"
                     /protein_id="HDC2862458.1"
                     /translation="MKLHELKPAEGSRKERNRVGRGVATGNGKTSGRGHKGQKARSGG
                     GVRPGFEGGQLPLFRRLPKRGFTNINRKEYAIVNLDQLNKFEDGTEVTPALLVESGVV
                     KNEKSGIKILGNGSLDKKLTVKAHKFSASAAEAIDAKGGAHEVI"
     gene            43069..44361
                     /gene="secY"
                     /locus_tag="O7798_000179"
     CDS             43069..44361
                     /gene="secY"
                     /locus_tag="O7798_000179"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500959.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="preprotein translocase subunit SecY"
                     /protein_id="HDC2862459.1"
                     /translation="MIQTLVNFFRTKEVRNKIFFTLAMLVIFKIGTYIPAPGVNPAAF
                     DNPQGSQGATELLNTFGGGALKRFSIFAMGIVPYITASIVMQLLQMDIVPKFSEWAKQ
                     GEVGRRKLNNVTRYLAISLAFIQSIGMAFQFNNYLKGALIINQSIMSYLLIALVLTAG
                     TAFLIWLGDQITQFGVGNGISIIIFAGILSTLPASLIQFGQTAFVGQEDTSLAWLKVL
                     GLLVSLILLTVGAIYVLEAVRKIPIQYAKKQTAQRLGSQATYLPLKVNSAGVIPVIFA
                     MAFFLLPRTLTLFYPDKEWAQNIANAANPSSNVGMVVYIVLIILFTYFYAFVQVNPEK
                     MADNLKKQGSYVPGIRPGEQTKKYITKVLYRLTFVGSIFLAVISILPILATKFMGLPQ
                     SIQIGGTSLLIVIGVAIETMKSLEAQVSQKEYKGFGGR"
     gene            44378..45025
                     /locus_tag="O7798_000180"
     CDS             44378..45025
                     /locus_tag="O7798_000180"
                     /EC_number="2.7.4.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500958.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adenylate kinase"
                     /protein_id="HDC2862460.1"
                     /translation="MNIILMGLPGAGKGTQASEIVKKFPIPHISTGDMFRKAIKEETE
                     LGKEAKSYMDRGELVPDEVTVGIVKERISEDDAKKGFLLDGFPRTIEQAEALNNIMSE
                     LDRNIDAVINIEVPEEELMNRLTGRRICESCGTTYHLVFNPPKVEGICDIDGGKLYQR
                     EDDNPETVANRLSVNIKQSKPILDFYDQKGVLKNIDGSKDISDVTKDVIDILDHL"
     gene            45218..45436
                     /gene="infA"
                     /locus_tag="O7798_000181"
     CDS             45218..45436
                     /gene="infA"
                     /locus_tag="O7798_000181"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017185218.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="translation initiation factor IF-1"
                     /protein_id="HDC2862461.1"
                     /translation="MAKQDVIELEGTVLDTLPNAMFKVELENGHEILAHVSGKIRMNY
                     IRILPGDKVTVEMSPYDLTRGRITYRYK"
     gene            45468..45581
                     /gene="rpmJ"
                     /locus_tag="O7798_000182"
     CDS             45468..45581
                     /gene="rpmJ"
                     /locus_tag="O7798_000182"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003720928.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L36"
                     /protein_id="HDC2862462.1"
                     /translation="MKVRPSVKPICEKCKVIKRKGKVMVICENPKHKQRQG"
     gene            45604..45969
                     /gene="rpsM"
                     /locus_tag="O7798_000183"
     CDS             45604..45969
                     /gene="rpsM"
                     /locus_tag="O7798_000183"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015900957.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S13"
                     /protein_id="HDC2862463.1"
                     /translation="MARIAGVDIPREKRVVISLTYIYGIGTSTAQKILEEANVSADTR
                     VKDLTDDELGRIREVVDGYKVEGDLRRETNLNIKRLMEISSYRGIRHRRGLPVRGQKT
                     KNNARTRKGPVKTVANKKK"
     gene            45993..46382
                     /gene="rpsK"
                     /locus_tag="O7798_000184"
     CDS             45993..46382
                     /gene="rpsK"
                     /locus_tag="O7798_000184"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016998822.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S11"
                     /protein_id="HDC2862464.1"
                     /translation="MARKQVSRKRRVKKNIENGVAHIRSTFNNTIVTITDEFGNALSW
                     SSAGALGFKGSKKSTPFAAQMASETASKSAMEHGLKTVEVTVKGPGPGRESAIRALQS
                     AGLEVTAIRDVTPVPHNGCRPPKRRRV"
     gene            46457..47401
                     /locus_tag="O7798_000185"
     CDS             46457..47401
                     /locus_tag="O7798_000185"
                     /EC_number="2.7.7.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011302606.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-directed RNA polymerase subunit alpha"
                     /protein_id="HDC2862465.1"
                     /translation="MIEIEKPRIETIEISEDAKFGKFVVEPLERGYGTTLGNSLRRIL
                     LSSLPGAAVKYIEIEGVLHEFSAVDNVVEDVSTIIMNIKQLALKIYSEEDKTLEIDVR
                     DEGEVTASDITHDSDVEILNPELKIATVSKGGHLKIRLVANKGRGYALAEQNNTSDLP
                     IGVIPVDSLYSPVERVNYTVENTRVGQSSDFDKLTLDVWTNGSITPQESVSLAAKIMT
                     EHLNIFVGLTDEAQNAEIMIEKEEDQKEKVLEMSIEELDLSVRSYNCLKRAGINSVQE
                     LADKSEADMMKVRNLGRKSLEEVKYKLEDLGLGLRKED"
     gene            47418..47786
                     /gene="rplQ"
                     /locus_tag="O7798_000186"
     CDS             47418..47786
                     /gene="rplQ"
                     /locus_tag="O7798_000186"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002450507.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L17"
                     /protein_id="HDC2862466.1"
                     /translation="MGYRKLGRTSDQRKAMLRDLATSLIISERIETTEARAKEVRSVV
                     EKLITLGKKGDLASRRNAAKTLRNVEILNEDETTQTALQKLFGEIAERYTERQGGYTR
                     ILKQGPRRGDGAESVIIELV"
     gene            48324..49133
                     /locus_tag="O7798_000187"
     CDS             48324..49133
                     /locus_tag="O7798_000187"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500951.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="energy-coupling factor transporter ATPase"
                     /protein_id="HDC2862467.1"
                     /translation="MEDKNSVIVFKNVSFQYQSDASFTLKDVSFNIPKGQWTSIVGHN
                     GSGKSTIAKLMIGIEKVKSGEIFYNNQAITDDNFEKLRKDIGIVFQNPDNQFVGSIVK
                     YDVAFGLENHAVPYDEMHRRVSEALKQVDMLERADYEPNALSGGQKQRVAIASVLALN
                     PSVIILDEATSMLDPDARQNLLDLVRKVKSEHNITIISITHDLSEAMEADHVIVMNKG
                     TVYKEGTATEIFDNAEELTRIGLDLPFPIKINQMLGHQTSFLTYEGLVDQL"
     gene            49130..49990
                     /locus_tag="O7798_000188"
     CDS             49130..49990
                     /locus_tag="O7798_000188"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500950.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="energy-coupling factor transporter ATPase"
                     /protein_id="HDC2862468.1"
                     /translation="MTIRFDNVSYTYQKGTPYQHQAIHDVNTEFEQGKYYAIVGQTGS
                     GKSTLIQNINALLKPTTGTVTVDDITITHKTKDKYIRPVRKRIGMVFQFPESQLFEDT
                     VEREMIFGPKNFKMNLDEAKNYAHRLLMDLGFSRDVMSQSPFQMSGGQMRKIAIVSIL
                     AMNPDIIVVDEPTAGLDPQSKRQVMRLLKSLQTDENKAIILISHDMNEVARYADEVIV
                     MKEGSIVSQTSPKELFKDKKKLADWHIGLPEIVQLQYDFEQKYQTKLKDIALTEEAFV
                     SLYKEWQHEK"
     gene            49980..50786
                     /locus_tag="O7798_000189"
     CDS             49980..50786
                     /locus_tag="O7798_000189"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500949.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="energy-coupling factor transporter transmembrane
                     protein EcfT"
                     /protein_id="HDC2862469.1"
                     /translation="MKNKLIIGRYLPINSFVHHLDPRAKLMFVFLFIILIFFCHSPLT
                     YLWVFALILFIMRLAKIQLWFLIKGLTPIFFFLIFTLMMHIFLTKGGYVLVEWHGITI
                     ETNGILEGLYISLRLIGIVMIATIMTLSTSPIDLTDAFERLLAPLKMFKLPVHQLSMI
                     MSIALRFIPTLMDELDKIILAQKSRGSEISSGNIATRIKSFIPLLVPLFISAFQRAEE
                     LAVAMEVRGYDANVKRTSYRQLKWQLRDTISLTMIIPIAIILFVLKYSGV"
     gene            50791..51594
                     /gene="truA"
                     /locus_tag="O7798_000190"
     CDS             50791..51594
                     /gene="truA"
                     /locus_tag="O7798_000190"
                     /EC_number="5.4.99.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500948.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA pseudouridine(38-40) synthase TruA"
                     /protein_id="HDC2862470.1"
                     /translation="MRILVEIAYQGNNFLGFQIQQNGRTVQQQFEKLLQRMHKRHVRI
                     HPSSRTDRGVHAIQQYFHFDTELNIPMSQWQYAMNRTLPDDIYVNNVVTVDDDFHCRY
                     DCVGKRYRYKVYQAQHRDPFQSGLKTFIPETLDLGKMNRAAQQFIGTHDFTGFCSQKT
                     EVESKVRTLYQSEIVKTDDGFDYIVTGSGFLYNMVRVLVAFLIEVGKGRHEVSDVPKL
                     LESKNRKNVPFTAPAEGLYLEKIYLDENELLKDFGNDIKIHRKKSLQND"
     gene            51834..52271
                     /gene="rplM"
                     /locus_tag="O7798_000191"
     CDS             51834..52271
                     /gene="rplM"
                     /locus_tag="O7798_000191"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019468667.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L13"
                     /protein_id="HDC2862471.1"
                     /translation="MRQTFMANESNIERKWYVIDAEGQTLGRLSSEVASILRGKNKVT
                     YTPHVDTGDYVIVINASKIEFTGNKETDKVYYRHSNHPGGIKSITAGELRRTNPERLI
                     ENSIKGMLPSTRLGEKQGKKLFVYGGAEHPHAAQQPENYELRG"
     gene            52285..52683
                     /gene="rpsI"
                     /locus_tag="O7798_000192"
     CDS             52285..52683
                     /gene="rpsI"
                     /locus_tag="O7798_000192"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500946.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S9"
                     /protein_id="HDC2862472.1"
                     /translation="MTLAQVEYRGTGRRKNSVARVRLVPGEGNITVNNRDVREYLPFE
                     SLILDLNQPFDVTETKGNYDVLVNVHGGGFTGQAQAIRHGIARALLEADPEYRGSLKR
                     AGLLTRDPRMKERKKPGLKAARRSPQFSKR"
BASE COUNT        19082 a         7821 c        10159 g        15988 t
ORIGIN      
        1 caaaggaaag gtgaaagatt tgaagataat agatgtgctt ttgaaaaata tatctcaggt
       61 tgtgttaatt agtaataaat ggacaggatt atttatctta ataggattat ttgtagccga
      121 ttggacaatt ggattagcgg ctattgtagg tagcatcatc gcctatactt ttgcgcgttt
      181 tataaattat agtgaggcag agattaatga tgggttagct ggatttaatc cagtgctaac
      241 tgccattgcg ttaacaatct ttttagataa gtcaggatta gatattgtta taacaatgat
      301 agcaacttta ttaacgttac cagttgctgc tgcagtgaga gaagttttaa gaccatataa
      361 agttccgatg ctgacgatgc cttttgtcat tgtgacttgg tttacaattt tactttcagg
      421 acaggttaaa tttgtagata catcgttaaa gttaatgcct caaaacattg aaacggttaa
      481 ttttagcaac aatgatagaa tacatttcat tcagtcatta tttgaaggat tcagtcaagt
      541 atttatcgaa gcgagtgtaa ttggtggcgt atgtatttta atcggcatat tgatagcatc
      601 aagaaaagca acactcttag ctgttatagc tagtttgtta agctttatca ttgtagctct
      661 attaggtggt aattatgatg atattaatca gggattattc ggttataact ttgtattaat
      721 ggcaatcgca ctaggatata catttaaaac agcgattaac ccttatattt cgactttttt
      781 aggtgtgtta ttaacagtag tggtgcaact aggtacaaca acattgcttg aaccgtttgg
      841 cttacctgca ttaacattgc catttattat cgtgacatgg attttattat ttgctggtat
      901 taaacatgac aaagtagatg cttgatagtt aaatcaaacc taatattgtt tgaatatcac
      961 cttaaactat acagcgaatt gtatagttta aggtgtattt ttatggataa aattaagtgc
     1021 atacttaatc gaattatcag ttttctttta attgttcaca gcacgttcct ttttattttt
     1081 aaagtcgagt gttaaactag gaataaataa tttatattgt gtgttgtgtg gggtgactaa
     1141 tatgaatgat atggataatt cctttttaat aacaacggaa attcaaagaa aatggattga
     1201 aaaattcaaa gtaattagag atacatttaa ggctaaagct gaatataatg atcaacatag
     1261 ccaattttca tataaaaata ttgaatggtt aattaaagaa ggttatggaa aattaacgtt
     1321 accaaaagca tatggtggtg aaggtgcgac catagaagac atggttattt tgcaatcatt
     1381 tttaggcgaa cttgatggtg ccacagcatt atctattggt tggcatgtga gtgtcgtagg
     1441 acaaatttat gaacagaaat tatggtctca agatatgttg gagcaatttg ctgttgaaat
     1501 taataatggt gcattagtta atagagcagt tagtgaagct gaaatgggta gtccaacaag
     1561 agggggaaga ccaagtacac atgctgttaa agctgatgat gggtatattt taaatggtgt
     1621 gaagacatat acatcaatga gtaaagcact aacacatatt attgttgctg cttatataga
     1681 agaattagaa agtgttggtt ttttcttagt agacaggaat ttgcctggtg ttgaaattgc
     1741 cgataattgg gacgtattag gtatgcgagc gacagaaagt catgatttaa tattaaatga
     1801 tgtaaaagta ccattaaaac atttagtgga aacagagaaa agtaaagcgc caaatggttg
     1861 gatattgcat ataccaagct gttatttagg tatagcacaa gctgctagaa attatgctgt
     1921 agactttgca atccaacata gccctaatag tattgaagga acgattgcaa cattgccaac
     1981 tgtgcaacaa aatttaggga aaatggaaac gctattgtta tgtgcgagac aatttttatg
     2041 gagtacagca aaagggtatc aacaatataa agatgacagt cagataagaa atccaacaag
     2101 tgcgagtaaa gtgatggtaa tgaatcaagg gcttgaagtg attgatttag cgatgagaat
     2161 agttggtgct aaaagcttag aaatgaatcg accattacaa cgttactatc gtgacatgcg
     2221 tgcaggatta cacaatccac ctatggaaga tgcagcatat acaaatattg ctaagagtat
     2281 tacagataca ttttaaattt taaaaggtaa atcgatcgtt gattggcata aagagatgaa
     2341 atttgacgtt cggatttacc cttttttttg tggggattta tagggatgtt aagatatttt
     2401 gttaaatttt ttgcgaaaat aaaaaataaa taacactagc tattgtaaat gtatatgcaa
     2461 tcttgtataa tttttgaatg attgataatc attttcaata ggaggaaatt atgaaaaaac
     2521 tattattacc attaataatt atgttattag tgttagctgc gtgtgggaac caaggtgaaa
     2581 aaaataacaa agctgaaact aaatcttata aaatggacga tggcaaaacg gtagatattc
     2641 cgaaagaccc taaacgcatt gcagtagttg cgccaacata tgctggtgga cttaaaaaat
     2701 taggtgcaaa cattgtagct gtaaatcaac aagtcgatca aagcaaagta ttaaaagata
     2761 aatttaaagg tgttacaaaa attggtgatg gcgatgtaga aaaagttgct aaagaaaagc
     2821 cagatttaat tattgtatac tctactgaca aagatattaa aaaatatcaa aaagtagcac
     2881 caacagtagt tgttgactat aataagcata aatatttaga acaacaagaa atgttaggga
     2941 aaattgttgg taaagaagat aaagtaaaag cttggaagaa agattgggaa gaaacaactg
     3001 ctaaagacgg taaagaaatt aaaaaagcaa ttggacaaga tgcaacagtg tcattgtttg
     3061 atgaatttga taaaaaatta tacacttacg gcgataactg gggtcgtggt ggagaagtat
     3121 tatatcaagc atttggtttg aaaatgcaac cagaacaaca aaagttaact gcaaaagcag
     3181 gttgggctga agtgaaacaa gaagaaattg aaaaatatgc tggtgattac attgtgagta
     3241 caagtgaagg taaacctaca ccaggatacg aatcaacaaa catgtggaag aatttgaaag
     3301 ctactaaaga aggacatatt gttaaagttg atgctggtac atactggtac aacgatcctt
     3361 atacattaga tttcatgcgt aaagatttaa aagaaaaatt aattaaagct gcaaaataat
     3421 tcagctatat aagttagtga aatgagagtc tgaaacatat caatcttttg atattgtatt
     3481 aggctcttat ttttatagct agaaagttag atatttgtat ttttttaaat aataagtgcc
     3541 gttgttatcg ttcaatttaa ttaatgatag attagtatta ttatagctaa agtagtatac
     3601 ctgagaaaat agctcaatgt atctctttat taataagtta tatcataatt attttagtgc
     3661 atactttatg gaagggatat cagggaatgg ctttcaatta aagaagaggt ttaaaaggat
     3721 tacaacagaa tgttatgatt ttgtagaaag atatataaca acgttttata aaaacataat
     3781 attgttaatg gaaaatgaaa tgtaaggggg atttcgagtg actaagaaag tttattttaa
     3841 ccacgatggt ggtgtagatg atttagtatc tctattttta ttattacaaa tggaaaacgt
     3901 tcaattgata ggggtcagta caattggtgc tgattgttat ttagagccat ctttgagcgc
     3961 atcagtaaaa attattaatc gtttttcaaa tgaagatatt caagttgcgc catcatatga
     4021 acgaggaaaa aatccatttc ctaaagaatg gcgtatgcat gcctttttta tggacgcatt
     4081 gccaatttta aatgagccag tcaaacatgt tgcttcaaat gtgagcgaca aagaagcctt
     4141 tgaagacatt attcaaactt taaagagaca atcagaaaaa gtaacattat tatttacagg
     4201 cccgcttaca gatttagcaa aagcactaca aaaagattca tctatcgttc agtatataga
     4261 aaaattagtt tggatgggtg gcaccttttt accaaaagga aatgttgaag aacctgagca
     4321 tgatggttct gcagaatgga atgcatattg ggatccagaa gcggttaaaa ttgtttttga
     4381 tagcgatata gagattgata tggttgcttt agaaagtacg aatcaagtac cgctaacgtt
     4441 agatgttaga caaagatggg cgaatgaacg ccaatatacg ggcattgatt ttttaggagt
     4501 aagttatgca gcggtaccac cattaacaca ctttataaca aattctactt actttttatg
     4561 ggatgtttta acgactgctt atattggtaa caaggacttg gttcattcaa ttgagaaaaa
     4621 agtcgatgta ataagttatg gaccaagtca aggtaagaca tttgagtgta aagatgggcg
     4681 caaaattaat gtcataaatc atgtagataa caacgcattt tttgattata taactgcact
     4741 tgctaaaaaa gtaaattaac agctgtgtag aataattaag gttttaattt atatagaaca
     4801 acttattgta aacttttcat ttcttaaagt ttacaatggt gctataataa tggtcatgaa
     4861 atacgaaagg aagtaaaaaa tgacaacaaa acagttagta tatacagctt taatgacagc
     4921 gattatcgct attttaggat tggtaccggt aattccacta ccattttctt cagtaccaat
     4981 tgtacttcaa aacattggta ttttcttagc aggtgtgatt ttaggacgta aatatggcac
     5041 attaagtgtt atcgtctttt tattattagt agttgctggc ttgccattgt tatcaggtgg
     5101 tcgcggtggc atcggtgtat tcgcaggtcc ttcagcaggg tttttactat tatatccagt
     5161 tgtagcattc atgattgggg cgattcgaga tagattcatc aatgaaatta atttctggat
     5221 tttattcgtt ggtattttag tttttggtgt tatagcatta gatgttattg gtacattgat
     5281 tatgggcatg attattaaca taccatttac gaaagctatt tcaatttcat tagcttattt
     5341 gcctggtgat atattaaaag cacttgtagc aagtttgatt ggtacagctt tacttaatca
     5401 ctcgcagttt cgtcaaatta tgggaataaa ataatcatat ttaagatagt aaagtaattg
     5461 aataagttgc tttgaaattt ataaaagtga aaggagtagg tgtcaatggc tagtataagt
     5521 atgtcagata tatattgtaa cggcactata tttgaaaatg acgacgagca gttgatttat
     5581 ttaacgcctt cttttccaca acgatacaca agtaacacat ggatatataa aaagacgcct
     5641 acccaagagc gatggctgaa agacttagaa cgtcaacatc aattacatac aaatcaaggt
     5701 tcaaatcatt atgcgtttag tttcccggaa aatgaacaac ttgataatca ttggatggct
     5761 atgtttaaag atatgaattt tgaactaggt attatggaat tgtatgccat agaaagtgat
     5821 gcgcttgcca atttgccgcg taactctgac gttgaaattg ccatcgttga cgagtcgcat
     5881 atagatgcct atttaaaagt tgcatatcag tttagtttgc catttggaaa agactatgca
     5941 gatgcacatg aagaaatggt aagggaacat tatcaaaaag atgtgattaa acgcttagta
     6001 gcttatttaa ataatgaacc tattggcgtt gtagatgtca ttgaaagtga aaattacatt
     6061 gaattagatg gatttggtgt attagaacaa tttcggcacc aaggaattgg atctacaatt
     6121 caatcgttga taggtgaata cgccatatca aaaaatcaca aaccaatcat attagttgca
     6181 gatggtgaag atacagcaaa agatatgtat gcaaagcaag gttatgtcta tcaatcgttt
     6241 tgttatcaaa tattaaaaga agatattgga aattaacgat tgatgatagg tttgtattag
     6301 aataaaaaag cagtaagctg gtttcgagta gaaatcaact tactgctttt taaattgttt
     6361 tgagctactt atacttataa aaatagtgcg tttaaattgt tgattcatgt agaatatcgt
     6421 tcattatgac acactataat gaatatgtta ttgttcagaa tcaatgatac gttctggatg
     6481 actgtatata ttaaagccac catttcgaat aaatccaact gccgtaatat ttaggtcatt
     6541 agctaaggtt acagcaagcg ttgtcggagc tgatttagat aaaatgacgc caacaccaat
     6601 ttttgcggct ttaattaaaa tttctgatga aatacgtcca ctaaaaatta atactttatc
     6661 tcggacagta atatgtcgct gaatacaaaa tccatataat ttatctagag cgttatgtct
     6721 accaatgtct tgtcgatgta caaaaaatgt caaaccatcg cttatagcag cattatgtaa
     6781 gccacctgtt tcttggtaaa tatgacttgc actttgtaat cgagtcatca tgttaataat
     6841 ttgcattgga gttaaagtga ttttagacat agatgtttta gcgatagcag catcattttg
     6901 aaaataaaac tcacgactct ttccgcaaca agatgcaatc attcgttttg tggaatattg
     6961 aaagcgatcg cctaaatctt tattaagttc aacatgggca aaacctttac tatcatcaat
     7021 cagtacagat tttaattcat ctcgctttaa aatggcacct tccgaagcca gaaatccaat
     7081 gactaactcc tcaaggtttg ttggactgca tataacagtc gcaaattctt caccattcac
     7141 cataattgta agtggaaatt ctgtcacata ttgatctgtt gtattgaata attttccatc
     7201 ttcatatcta acaattggtt gacctaaaga tacatctttg ttcattatct aaccccttta
     7261 attagcttaa actttatttt aaagcaattt gcttaaaatt ttaacatatt tgcttaagtt
     7321 tgaaatttga ttgataaaaa ttaatagcga gcaatctgtt tgatttaaat tgaattcgag
     7381 aatatacata ctagggcatc aattaataaa tatcaatctt atgcaaattt gacaattgtt
     7441 tgaatcaata tataaacagg caacggttct tttcaaatat aatagtaagt gtataatgaa
     7501 aatgtaaata ttattaaaaa tgggggttca ctcaatgaaa ttgaaacgtt tatttgctgt
     7561 tgtgattgca atgcttttag tattagctgg ttgctctaat tctaacgata ataatgaaag
     7621 taaaaaagat gacgcagaca atggtaagaa acaagagatt caagttgcag cggcagcaag
     7681 tttaacagat gtaaccaaga aattagcttc agaatttaaa aaagagcata aaaatgctga
     7741 tattaaattt aactatggtg gatcaggggc attaagaaaa caaattgaat caggcgcacc
     7801 tgttgacgta tttatgtctg caaatactaa agatgtagat gcattaaaag acaagaataa
     7861 agcgcatgat acatataaat atgcgaaaaa tagtctagta ttaattggtg ataaagattc
     7921 aaattacact tcagtaaaag acttaaaaga caatgataaa ttagcattag gtgaagtgaa
     7981 aactgtacca gcaggaaaat atgcgaaaca gtatttagat aacaataact tatttaaaga
     8041 agtcgaaagt aaaatcgttt atgctaaaga tgtaaaacaa gtattaaatt atgttgaaaa
     8101 gggtaatgcg aaacaaggtt ttgtgtataa aactgactta tataaacaaa ataaaaaaat
     8161 tgatactgta aaagtaatta aagaagtaga acttaagaag ccaatcacat acgaagctgg
     8221 tgctacatca gatagtaaat tagcaaaaga gtggatggaa ttcttaaaat cagataaagc
     8281 taaagaaata ctaaaagaat accactttgc agcataagga gttgtaatcc atgcctgact
     8341 taacaccttt ttggatatca atacgagttg ctgtaatcag tacgattatt gtaacggttt
     8401 taggtatttt tatatctaaa tggttgtatc gtcgtaaggg ttcgtgggtt aaagtattgg
     8461 aaagtttatt gatattacct attgttttgc cgccaacggt attaggtttt attctattaa
     8521 tcatcttctc gccaagagga ccaatcggtc aattctttgc gaatgtacta catttacctg
     8581 tagtgttcac tttgacaggt gctgtgatag catctgtcat tgttagtttt ccactaatgt
     8641 atcaacatac tgtgcaaggc ttcagaggta tagacacgaa aatgattaat acagctagaa
     8701 cgatgggagc aagtgaaacg aaaattttcc tcaaattaat tttaccatta gctaaacgct
     8761 ctattttagc aggtataatg atgagttttg ctcgtgcatt aggtgagttt ggtgctacat
     8821 taatggttgc aggatatatt ccaaataaaa cgaatacact acctttagaa atatacttct
     8881 tagtggaaca aggtagagaa aatgaagcgt ggttatgggt attagtgcta gtcgcattct
     8941 ctattgtggt tatatctaca attaatttat tgaataaaga taaatataag gaggtcgact
     9001 agatgcttaa aatcaatgtg aaatatcaat taaagaacac tttaattcgc atcaatatag
     9061 atgatactga accaaaaatt tatgcagttc gtggtccatc tggcattggt aaaactactg
     9121 ttttaaatat gattgccgga ttacgtaaag cagatgaagc tattatcgaa gtgaatgggc
     9181 aattacttac tgatacggca aaaaacgtga atgttaaaat tcaacaacga cgtattggat
     9241 atctgtttca agactaccaa ttgtttccta atatgacggt ctataaaaat attactttta
     9301 tggctgaacc atctgaacac atcgatcaat taattcaaac tttaaacatt gatcatttga
     9361 tgaaacaata tcctatgaca ttgtcaggtg gagaggcaca acgtgtagca cttgcacgtg
     9421 cacttagcac gaaaccagat ttaattttat tagatgaacc tttttctagt ttggatgata
     9481 ctacaaaaga tgagagtatt acattagtta aacgtatttt caacgaatgg caaataccaa
     9541 tcatatttgt gacacattca aactatgaag cagaacaaat ggctcatgaa attattacaa
     9601 ttgggtaatc atttatttgc cattaaagag tttagaacgt atttaaaatt gtagaagtga
     9661 atgcttctat cagcatttta atgatgtttt aaactctttt ttaggggcag tttttttgag
     9721 agacattgac gcgcgtcata taatgaaagt aatgataaaa agaaaggata acttaatgtg
     9781 agtcaagaac gttattcaag gcaaatttta tttaaacaaa taggtgaaat aggtcaaagc
     9841 aaaataaatc aaaaatgtgc gttgattatt ggtatgggcg cattaggtac acatgtggcc
     9901 gaaggacttg ttagagcagg cattgccaaa ctaatcattg ttgatagaga ttatattgaa
     9961 tttagtaatt tacaaagaca aacattgttt actgaagaag atgctttgaa aatgatgcct
    10021 aaggtggttg cagctaaaaa gcatttgcta gcgttacgta gtgatgttga tattgatgat
    10081 tatattgccc atgtggatta ttattttttg gaaacacatg gacaggacgt tgacgttatt
    10141 attgatgcaa ccgataactt tgaaacacga caactgatta atgattttgc atataaatat
    10201 cgtatacctt ggatttatgg tggtgttgta cagagtacat atacagaagc tgcatttata
    10261 cctggtaaaa caccttgctt taactgtttg gtaccacaat tgccagcatt aaatttaaca
    10321 tgtgatacag taggggtcat tcaacctgcc gtgacgatgg caacaagttt acaattaaga
    10381 gatgcgatga aagtattaac ggaacaacca attgacacaa aaataactta tggcgatatt
    10441 tgggaaggta gtcattattc atttggtttc agtaaaatgc aacgttcaga ctgtacaact
    10501 tgtggagatg taccaagtta tccgtattta aacaagaatg aacaacgtta tgcaacattg
    10561 tgtggtagag acactgtaca gtatgaaaat gcatcaatta cacacgacat tcttgttcaa
    10621 tttttaaaac aacatcagtt aaattatcgc agtaattcgt atatggttat gtttgaattt
    10681 aaaggacacc gcattgttgc ttttaaaggt ggaaggtttt taatacatgg catgacacgc
    10741 acatcagatg ccacacatct aatgaattta ttgtttggat aaaaaaagat aagacaaaag
    10801 gagtgtaata ttatgggcga acatcaaaac gttaaattga atcgtacagt taaagcagcc
    10861 gtactaacgg tatcagatac tagagacttt gatacagata aaggtggtca atgcgtgcgc
    10921 caactattac aagcagatga cgttgaagtg agtgacgcac attatacaat tgtgaaagat
    10981 gaaaaagtag ccatcacgac gcaggtgaag aagtggttag aagaagatat tgatgtcatc
    11041 attacgactg gtggaacagg tattgcacaa cgtgatgtga cgattgaagc agtaaaacca
    11101 cttttaacta aagagataga aggctttggg gaattgttta gatatttgag ttatgttgaa
    11161 gatgttggca cgcgtgcatt attgtctcgt gctgtagcag gtacagttaa taataaattg
    11221 atattttcga ttccaggatc aacaggcgca gttaaattag cattagaaaa gctcattaaa
    11281 ccagaattaa atcatctgat tcatgagctt acaaaataat ttattgattt gattggcgtt
    11341 gaaaatctcc agatttaccg ccagacttgc tttcaaggta ggtttcgcca ataatcatac
    11401 ctttatcaac tgctttcgtc atgtcgtaaa tggttaaagc cgttgctgat gcagcggtta
    11461 aagcttccat ttcaacaccg gttttgccag ttgtagagac agttgtttga atgtttaaag
    11521 tataaagggg tgcatttgtt tcatcccagc tgaagtgaac atctatgcca gtcaatggta
    11581 atggatggca catcggaata agtgttgatg tatttttggc agccataata ccagcgattt
    11641 gagcagtgtt caatacattg cctttggtat tggtgttatt agaaatctgc ttaaaaatag
    11701 tttcatttac agtaatgctt gaatgagcga cagcagttct ttttgtaatt tgtttgtctg
    11761 atacatcgac cattttggcg tggccttgtt gattaatatg agtaaactca gtcattttac
    11821 ccctcctagt gcatctagta tatcatgaaa aaataaaagt tttggagatg atttttaatg
    11881 gtagtagaaa aaagaaaccc aatcccagtt aaagaagcaa ttcaacgtat cgttaatcag
    11941 cagagttcaa tgccggcaat tacggtagca cttgaaaaaa gtctaaatca tatcttagca
    12001 gaagatattg tagctactta tgatatacca aggtttgata aatcacctta tgatggtttt
    12061 gcaattcgca gtgttgattc acaaggggca agtggtcaga atcgcattga gtttaaagtg
    12121 attgatcata ttggtgcagg ttcagtttct gataaattag ttggggatca cgaagcggtg
    12181 cgtattatga ctggagcaca aatacctaat ggcgcagatg ctgttgttat gtttgaacaa
    12241 acgattgaac tagaagatac atttacaatt cgtaaaccat tttcaaaaaa tgaaaatata
    12301 tctttaaaag gtgaagaaac aaagacaggc gatgttgttc taaaaaaagg acaagtaatt
    12361 aatccagggg ctatcgcggt ccttgcaaca tatggctatg cagaggttaa agttattaag
    12421 caaccgagtg tcgctgttat tgcaacagga agcgaattat tagatgttaa tgatgtatta
    12481 gaagatggaa aaattcgtaa ctctaatggc ccaatgattc gtgccttagc agaaaaatta
    12541 ggtcttgaag ttggtattta caaaacacaa aaagatgatt tagatagtgg catccaagtc
    12601 gttaaagaag ctatggaaaa acatgatatc gttattacaa cgggcggagt ttctgttgga
    12661 gattttgact atttacctga gatttataag gctgtaaagg cggaagtgtt atttaataaa
    12721 gtagcaatgc gtcctggtag cgtaacaacg gttgcatttg tagatggaaa gtatttgttt
    12781 ggattatctg gaaatccatc agcttgtttt acaggatttg aactatttgt gaaaccagct
    12841 gttaaacata tgtgtggcgc actagaagtc ttcccgcaaa taattaaagc aacattaatg
    12901 gaagatttta ccaaggcaaa cccattcaca cgatttatac gtgctaaagc aacgttaaca
    12961 agtgctggag ctactgtagt accttcagga ttcaataaat caggtgcggt tgtagcgatt
    13021 gcacatgcta actgtatggt catgttacca ggagggtcac gtggttttaa agcggggcat
    13081 acagtagata ttatattgac tgaatctgac gctgctgaag aggaacttct tttatgattt
    13141 tacaaattgt aggttacaaa aagtctggta agacaacatt gatgaggcat attgtctctt
    13201 tcttaaagtc acatggttat acagttgcta ctattaaaca tcatgggcat ggtaaggaag
    13261 atattcaatt acaggattca gacgtcgatc acatgaagca ttttgaagcg ggggcagatc
    13321 aaagtattgt acaaggtttt caatatcagc aaactgtaac acgtgtagat aatcaaaatc
    13381 ttactcaaat tattgaaaaa tctgttacaa ttgacaccaa tatcgtatta gttgaaggct
    13441 ttaaaaatgc tgattttgaa aaagtcgtag tctatcgaaa tgaagaagag ttgcaagtat
    13501 tacaacaatt gtcgaatgtt tgttatagca ttaatgtaag ggagcatgaa gattttacag
    13561 catttgagca atggttatta aataaaatta aaaatgattg tgatacacaa ttaacataga
    13621 ggattgaaat gaatgaaaca atttgaaatc gtgacagaac cgatacaaac agaacaatat
    13681 cgtgaattca ctataaatga atatcaaggt gcagtagttg tttttaccgg tcatgttcgc
    13741 gaatggacta aaggcgtcaa aacggaatat ttagaatatg aagcgtatat tccaatggct
    13801 gaaaagaaat tggcacaaat tggagatgaa ataaatgaaa aatggcctgg aacgataacg
    13861 agtattgttc atagaatagg gccattacaa atttcagata tcgctgtatt aattgcggtt
    13921 tcttcaccgc atcgtaaaga tgcctatcga gcaaatgaat atgcaattga gcgtataaaa
    13981 gaaattgttc cgatttggaa aaaagaaatt tgggaagatg gttcaaaatg gcaagggcat
    14041 caaaaaggga attatgaaga agcgaagagg gaggaataag agagatgaag gtactttact
    14101 tcgcagaaat taaagatata ttacaaaaag cacaggaaga tattgtgctt gaacaagcat
    14161 tgactgtaca acaatttgaa gatttattgt ttgaacgtta tccgcaaatc aataataaaa
    14221 agtttcaagt tgctgtaaat gaggaatttg tacaaaaatc ggatttcatt caacctaatg
    14281 atactgttgc attaattcca ccggttagtg gaggttaagg gagcatgaaa gcaataattc
    14341 ttgcaggtgg tcattcagtg cgatttggta agcccaaagc ttttgcggaa gtgaacggtg
    14401 agacctttta tagtagagta attaagacat tagaatcaac aaatatgttc aatgaaatta
    14461 ttattagtac aaatgcgcaa ttggcaacgc aatttaaata tccaaatgtt gttatagatg
    14521 atgagaatca taatgataaa ggtccattag caggaattta tacaatcatg aagcaacatc
    14581 ctgaagaaga attgtttttt gtcgtttctg ttgatacacc aatgattact ggtaaagctg
    14641 taagcacgtt gtatcagttt ttagtttctc atcttattga aaatcattta gatgtcgcag
    14701 cttttaaaga agatggacgt tttattccaa caattgcatt ttatagtccg aatgcattag
    14761 gcgctataac taaagcacta cattctgata attacagttt taaaaatgta tatcatgaat
    14821 tatcaacgga ttatttggat gtaagggatg tagatgcgcc ctcatattgg tacaaaaata
    14881 taaattatca gcatgatttg gacgctttaa ttcaaaaatt gtaagctgtt aggaggtcca
    14941 caaatggtag aacaaataaa agataaacta ggacgtccca tccgtgactt acggttatct
    15001 gtgacagatc ggtgtaactt taggtgtgat tattgcatgc ctaaagaggt atttggagat
    15061 gatttcgtat ttttacctaa aaatgaactt ttaacgtttg atgaaatggc tagaatcgct
    15121 aaggtatatg cagaattagg tgtaaaaaaa atacgcatta caggtggaga accattgatg
    15181 cgacgggatt tagatgtact tatagctaaa ttaaatcaaa tcgatggtat tgaagatatt
    15241 ggtttgacta caaatggttt gttattaaaa aagcatggac aaaagttata tgatgctggg
    15301 ctgcgcagaa ttaatgtcag tttggatgct attgatgata cgctatttca atcaatcaat
    15361 aatcgtaata ttaaagcgac tacgatttta gaacaaattg attacgcgac gtctattggt
    15421 ttgaatgtaa aagtaaatgt tgttatacaa aaaggtatta acgatgatca aatcatacca
    15481 atgcttgaat attttaaaga taaacatata gagattcgat ttatagaatt tatggatgtt
    15541 ggtaatgata atggatggga tttcagtaaa gttgtaacta aagatgaaat gcttacaatg
    15601 atagagcagc actttgaaat cgatcctgta gaaccaaaat attttgggga agtagcaaaa
    15661 tattatcgcc ataaggataa tggtgttcaa tttggtttga ttacaagtgt ttcacaatca
    15721 ttttgttcta catgtacacg cgcaaggctg tcatcagatg ggaagtttta cggatgttta
    15781 tttgcaactg tcgatggatt taacgttaaa gcgtttattc gttctggcgt gaccgacgaa
    15841 gaattaaaag aacaatttaa agctttatgg caaataagag atgatcgata ttcagatgag
    15901 agaactgctc aaacagttgc caatcgtcaa cgtaaaaaga taaacatgaa ttatattggt
    15961 ggttaatgtg tagggaccac tacatattaa atcattagag atgttttaat atttctgtct
    16021 tactccctaa aatacaatat tatttattaa agtaaaaacg gtcatatcta tgccagattt
    16081 aatagaaatg atcgttttta aagtttttac aagttggcag ggccccaaca cagaagctga
    16141 cagaaagtca gcttacaata atgtgcaagt tggcggggcc ccaacataga gaatttcaaa
    16201 aagaaattct acagacaatg caagttgggg aacggggccc caacacagaa ggtgacgaaa
    16261 agtcagcata caataatgtg caagttggcg gggccccaac atagagaatt tcaaaagaaa
    16321 ttctacagac aatgcaagtt ggggatcaac gaaataaatt ttatgagaat atcatttcta
    16381 tcccactctt aagaatcact acataataaa tctttagtgg ttctttaaca ttgatgtcac
    16441 actccatgcc attgagttgt aatatatctt ttttaggtat aaatgttgtc gaataaacaa
    16501 caagttgtcc aaaagatata aatctaaaca agatatagcc agcaatttaa tatttgtaat
    16561 agataaaatg ctaagtttga tatataataa atttaagtaa ttgtataata atatgaatta
    16621 caaacatcta agaagaaaca taggaggcat catattatga gtaataaagt tcaacgtttt
    16681 atagaagcag aaagggagtt aagtcagtta aagcactggt taaaaacaac acataagatt
    16741 tcaattgaag aatttgtagt cctttttaaa gtgtatgaag ctgaaaagat tagcggtaaa
    16801 gaattgaggg atacattaca ttttgaaatg ctatgggata caagtaaaat cgatgtgatt
    16861 atccgtaaaa tctataaaaa agagcttatt tctaaattgc gttctgaaac ggatgaaaga
    16921 caagtattct atttctatag tacttctcaa aagaaattgt tagataaaat tactaaagaa
    16981 atagaagtgt taagcgttac aaactaaaaa cttaaaaagc atgccaatca gtacatcata
    17041 attgcgtctt ggggacagac aaatgatgaa tagagattgg catgcttttt atttttgaat
    17101 ataaatattt agttcatggc atttctagtt acatgacgtc catgaattaa gaagtaaaca
    17161 agcatagtaa tgattgctaa agcggccata aagccgaaga tttcactata tgaaaacata
    17221 tgagtaaata acccaaggaa tgatggaccg aagccgacac ctgcatctag accaacgtaa
    17281 aaagtagatg tcgcgatacc atatttaatc gggggtgaga cttttatcgc aatagattgc
    17341 attgcagatg ataaatttcc ataccctaaa cctaggcaag caccagcaag taatattaac
    17401 cagctttgat agcttgaaat taagcataca aatgaaagga aaagcatgat aaatgctggg
    17461 tagacaataa tattttcatt tttatcatcc atcaatctac cagcaatagg tctagtaatt
    17521 aacgatgcta tagcatagca aataaagaaa tagcttgctg cagtgactag gtgtcgctct
    17581 aaagcaaatg cttgtaaata agttaggatg gacgcatagg taacgccaat taaaagcata
    17641 attacagcaa caggaatggc ctcttttgca ataaattgat gaatactaaa tcttggttta
    17701 tcaatgacat tagtttcagt tttgttattt gttacttcga aatcaacttt tataaataat
    17761 gagataatga gtccgagtat gcctaatatg acacaaataa taaacagtaa gtcaattgcg
    17821 tattttgtaa taagtaacat gcctagaaat gggccaatcg ctgtacctaa tactaaactt
    17881 aaggaaaata aactgatgcc ttcacttttt ctattaacag gggtaacgta tgccgcaata
    17941 gtacctgttg cagttgtcac aactgcagtt gcgataccgt ttatgagacg tacaaagatt
    18001 aaaaaagcta aagatccatc aataaaataa agtaattgcg tgataattaa agcaattaaa
    18061 ccaataaata ataatcgttt aggtccgatt tgatttacaa atttacctgt agcaaatcga
    18121 ccaattaaag acccgacaat aaatagtcct acaactaatc cggctaatga atcggaagcg
    18181 tcgaaagctt gcttactata gccagcaata actacaagta acaaatacat gcataggtat
    18241 acgataaagt tgactaaaaa gttaattgta aaacttttgg tgaaaatagg tgatttattt
    18301 aatgagcctt gattagtcat tgtgtgcctc ctttaataat atttcatgaa tttgattcat
    18361 cacatttatg gtttcttgca tttgatcttg cgaaatgttt gttttggcaa ctactgcttg
    18421 ttggagcttt tgtacatcaa gacaaacaat ctcatataat tcatgccctt taggtgttaa
    18481 agttaaaaac ttttgtcgtt tatcctctaa actgttttct actgttataa ggtcattttc
    18541 tattagagct tttaaagttt ttcttgcagt aggcttttca attgcacgtc tatgtgaaat
    18601 ttcaatgaga gtagtgggct gatgtttagc gatatcgcgt aagattaacc attggccata
    18661 atatatattg tgtttttcta aaatcggctc ggctaatttt aaataggggc gatatattgt
    18721 tataaaacta ttgaaaaatt cttgtgatag catagtgaca tctcctaaga caaaatagtt
    18781 agcttagcta acctttttac aacaatagta attataaaac gggagcaatt agaaatcaat
    18841 atataattat taagagcaaa aataattata ctttgttaaa ataagcgtaa ttacatgtaa
    18901 atagggggat actaatgata ttgaaatttg atcacatcat tcattatata gatcagttag
    18961 atcggtttag ttttccagga gatgttataa aattacattc aggtgggtat catcataaat
    19021 atggaacatt caataaatta ggttatatca atgaaaatta tattgagcta ctagatgtag
    19081 aaaataatga aaagttgaaa aagatggcaa aaacgataga aggcggagtc gcttttgcta
    19141 ctcaaattgt tcaagagaag tatgagcaag gctttaaaaa tatttgtttg cgtacaaatg
    19201 atatagaggc agttaaaaat aaactacaaa gtgagcaggt tgaagtagta gggccgattc
    19261 aaatggaaag agatacacat aaagatggta aggtaaagtg gcaattgctt tatataatga
    19321 atcaggatga tgatgaaatt aagccaccat tttttattca atgggaagaa agagattcca
    19381 tgcgtactaa aaaattgcaa aaatattttc aaaaacaatt ttcaattgaa actgttattg
    19441 tgaaaagtaa aaaccgatca caaacagtat cgaattggtt gaaatggttt gatatggaca
    19501 ttgtagaaga gaatgaccat tacacagatt tgattttaaa aaatgatgat atttatttta
    19561 gaattgaaga tggtaaagtt tcaaaatatc attcggttat cataaaagac gcacaagcaa
    19621 cttcaccata ttcaattttt atcagaggtg ctatttatcg ctttgaacca ttagtataaa
    19681 tatacgtaag tgctatgagc gagaatgccc atatgaataa tgacaagcac aatggaaaga
    19741 atcgttaata tattatttaa tcgtgatgac ttaattaaaa tgaaaaagat tgataatata
    19801 aatgtgaaaa agataagtat aacccgtaaa ctaaagtaat tcacggtgag aggttgactc
    19861 aatgtcataa tgattgcaac gatgttcata attataaata gacttaaaat aattgttctc
    19921 atatcaaaca cctcattgtt agattattga cattataaca ggggtaattg tatatgaaca
    19981 ttaatgtggt tgcttgagga aaaatttatt cattgaagtc aagttggttc attttagaaa
    20041 tgaatatcgt gttagatgat gaaagtatat tgaagtatag gtaactagtt gaaaagtatt
    20101 aattgtacga taacattaaa tttaacacga aacatagata taaaatgatt cacaattaaa
    20161 atgggtaaat ttgaacttgc taaactatta attggagcat ggacatttca aaaataagag
    20221 ttcaaatctt acacaagctc tgaatcgaca ctataagata caaactgtat aattaaaggt
    20281 attgttaaat agaaggagat atcataaatc atggaaaaga tgcatatcac taatcaggaa
    20341 catgacgcat ttgttaaatc ccacccaaat ggagatttat tacaattaac gaaatgggca
    20401 gaaacaaaga aattaactgg atggtacgcg cgaagaatcg ctgtaggtcg tgacggtgaa
    20461 gttcagggtg ttgcgcagtt actttttaaa aaagtaccta aattacctta tacgctatgt
    20521 tatatttcgc gtggttttgt tgttgattat agtaataaag aagcgttaaa tgcattgtta
    20581 gacagtgcaa aagaaattgc taaagctgag aaagcgtatg caattaaaat cgatcctgat
    20641 gttgaagttg ataaaggtac agatgctttg caaaatttga aagcgcttgg ttttaaacat
    20701 aaaggattta aagaaggttt atcaaaagac tacatccaac cacgtatgac tatgattaca
    20761 ccaattgata aaaatgatga tgagttatta aatagttttg aacgccgaaa tcgttcaaaa
    20821 gtgcgcttgg ctttaaagcg aggtacgaca gtagaacgat ctgatagaga aggtttaaaa
    20881 acatttgctg agttaatgaa aatcactggg gaacgcgatg gcttcttaac gcgtgatatt
    20941 agttactttg aaaatattta tgatgcgttg catgaagatg gagatgctga actattttta
    21001 gtaaagttgg atccaaaaga aaatatagcg aaagtaaatc aagaattgaa tgaacttcat
    21061 gccgaaattg ctaaatggca gcagaagatg aaaacatctg aaaagcaagc taaaaaagcg
    21121 caaaatatga ttaatgatgc gcaaaataaa attgctaaaa atgaagattt aaaacgagac
    21181 ctagaagctt tagaaaagga acatcctgaa ggtatttatc tttctggtgc actattaatg
    21241 tttgctggct caaaatcata ttacttatat ggtgcgtctt ctaatgaatt tagagatttt
    21301 ttaccaaatc atcatatgca gtatacgatg atgaagtatg cacgtgaaca tggtgcaaca
    21361 acttacgatt tcggtggtac agataatgat ccagataaag actcagaaca ttatggatta
    21421 tgggcattta aaaaagtgtg gggaacatac ttaagtgaaa agattggtga atttgattat
    21481 gtattgaatc agccattgta ccaattaatt gagcaagtta aaccgcgttt aacaaaagct
    21541 aaaattaaaa tatctcgtaa attaaaacga aaatagatta acgactgaaa tctgaacgct
    21601 cataagactg tcatttgcgt tcagattttt ttacacaata tagaatggtt gagtaaaata
    21661 tttttgaata tagtgaaaga gggggaagta ctgtgataaa aaagctatta caattttctt
    21721 tagggaataa gtttgctatc tttttaatgg ttgttttagt tgtcttgggc ggtgtatatg
    21781 cgagtgctaa attgaaatta gaattactac caaatgtaca aaatccagtt atttcagtta
    21841 caacaacaat gccgggtgca acgccacaaa gtacccaaga tgaaataagt agtaaaattg
    21901 acaatcaagt aagatcattg gcatatgtga aaaatgttaa aacgcaatcc atacaaaatg
    21961 cttcaattgt aacagttgaa tatgaaaata atacagatat ggataaagca gaagaacagc
    22021 ttaaaaaaga aatcgataaa attaaattta aagatgaagt tggtcaacca gaattaagac
    22081 gtaattcgat ggatgctttt ccggttttag catattcatt ttcaaataaa gagaatgact
    22141 tgaaaaaagt aacgaaagta ctgaatgaac aattaatacc aaaattgcaa acggtagatg
    22201 gtgtgcaaaa tgcgcaatta aatgggcaga cgaaccgtga aatcaccctt aaatttaagc
    22261 aaaatgaact tgaaaaatat gggttgactg ctgatgatgt agaaaactat ctaaaaacgg
    22321 caacaagaac aacgccactt ggattgttcc aatttggtga taaagataaa tcaattgttg
    22381 ttgatggtca atatcaatct gttgatgctt ttaaaaacat aaatattcca ttaacgttgg
    22441 caggaggaca agggcaatct caatcccaaa gtgacaataa acaaaattca gccatgtcag
    22501 acgttaatca ggcatcacca cagcaaaatt caaaagcgtc agcaccaaat aatataagtg
    22561 gtatgccgac agcgaaacta ggagatttag ctgatattac agttggtgat gtgcgtactt
    22621 ctatttctaa aacgaatgga aaggatgcgg ttaatctaca aataactaaa gctcaagatg
    22681 ccaatacagt tcaagtagcc aaagatgtac aacgtaaaat tgatacattc gttgatgaaa
    22741 ataaagattt taatgtcaca aaaacaatgg atactgcaaa gcctgttgag aaatcacttt
    22801 atacgatggt tgaaaaagca tcattaggta caatcgtggc aattatagtt attttgctgt
    22861 ttttaagaaa cattcgtacg acggcaattt ctattatatc gattccgtta tcacttctta
    22921 tggcgcttat tgctctgaaa ttgagtgatg tttcattgaa tatactaacg ttaggtgcat
    22981 taacagtagc gattggacgt gtgatagacg attcgattgt agttgttgaa aatatttatc
    23041 gacgcttaac agattcagaa gaacaactaa aaggtgaaaa tttaattatc agtgcgacaa
    23101 ctgaagtatt taaaccaata atgtcatcga cactagttac tattatcgtc ttcttaccac
    23161 ttgtgtttgt atcaggttca gtaggcgaaa tgtttagacc ttttgcattg gctattgcat
    23221 ttagtttatt agcatcgtta ttagtgtcaa ttacactcgt tccagcgttg gcagctacac
    23281 tatttaaaaa aggcgttaaa cgtcgtaata aacaacatca agaaggatta ggtgttgtta
    23341 gtacaactta taaaaaagta ttacattggt cattaaatca taagtggatt gtaattatat
    23401 taagtacatt aattttggtt gcaactattg tatttggagg accgagacta ggcactagct
    23461 ttatttcagc aggtgacgat aaatttttag ctattactta tacaccgaag cctggtgaaa
    23521 cggagcaagc agtgttgaat catgcgaaag atgttgaaaa atatttaaaa cagaaaaagc
    23581 atgtaaaaac aattcaatac tcagttggcg gtagtagtcc agtagatcca acgggtagta
    23641 caaatagtat ggcaatcatg gttgaatatg ataatgacac gcctaatttt gatgtagaag
    23701 cggataaggt tattaaacat gcagatggct ttaaacatcc tggagagtgg aaaaatcaag
    23761 atttaggaac aggtgcaggt aataaatctg tagaggttac tgtaaaaggt ccatcaatgg
    23821 atgccataaa atcaactgta aaagatattg aacagaaaat gaaacaggtt aaaggactag
    23881 ccaatgtcaa atctgattta tcgcaaacat atgatcagta tgaaattaaa gtcgatcaaa
    23941 ataaagcggc agaaaatggt atttctgcaa gtcaacttgc aatgcacttg aatgaaaact
    24001 taccagaaaa aacagttacg actgttaaag aaaatggtaa aactgttgat gttaaagtca
    24061 aacaaaataa gcaaacagac tggtcagaag ataagttgaa taatataact ttgaaaaagc
    24121 cgactggtgg tacgattaaa ttgggagata tcgctacgtt agttaaaaca acgacaccaa
    24181 gtaaattgac gcaagaacaa ggagattatg caacgacggt atctgctaaa gtaacaaata
    24241 aagatgtggg tggcacaaca cgacaagtga tgtctaaaat aaataatttg gacaaaccga
    24301 ataatgtaaa ggttaatatc ggtggtgcat cagatgatat taacaatgca atgacacaat
    24361 tagcctttgc aatgttagct gcaatcatta tcgtatattt aatcctagtt attacattta
    24421 aaggtggcct agcaccattt acaattttat tctctttacc atttacagtt atcggtgtaa
    24481 ttattgcact attaatcaca ggagaaacaa tatcagtacc aagtttaatt ggtatgctaa
    24541 tgttaattgg aatcgtagta acaaatgcca ttgtgttaat agaccgtgtt attaataatg
    24601 agcaacaggg catggagatg aaagaagcat taatcgaagc aggcggtact agaattagac
    24661 cgatattaat gacggcgatt gcaacaattg gtgcattagt tcctttgtta tttggtcaag
    24721 atagctcgat tcttatttcg aaaggattag ctgctacagt tattggtggt ttaatttcat
    24781 caactttatt aacacttgta gttgtaccag taatatatga aattctcttt actttaaaaa
    24841 aacgattcac taaacgatag ataatataaa agccataaaa gcggtcatga tattgactac
    24901 ttttatggct ttttaaaatt tgaaatttta gaccttattt cacgtgcgat ttaatcgatg
    24961 tgttaataaa acaatactgg cattcaacat gtaatccgat aataaaataa ggttgcaatt
    25021 atgttattgc atattttgtt tattacttag aataatacga tggttaagat gaaatatatg
    25081 acaaagataa ataatgacat taaattcaag atgtttacgc cttttagatc ttttttaagc
    25141 attttaaatc ctgtcacttc gacattaccg actaagagta ataagacgat aaatacccac
    25201 caattctctt ttggaaaact catcgtcgtt aatgctaaga cgaataataa caacacaccc
    25261 ataataattc tcaaaatgcg agtaaataca acttccattt taaaaatact aataaaacta
    25321 acaattagat aaagtattgc tagtaaaatc agataaaatt gcatatgata acttcctctc
    25381 cgtttcaaag ggttcatgta gtacagcagc gtagaaaaca taaatagcag tgttgggata
    25441 gatatgcgtg tatgttgtta atgaaacact aaatcataac acgacaacat cttgtgattc
    25501 tagatgtaat tgagcgaaaa atgaagcaat tcatcaatat aacgtattca gagcaatgct
    25561 agtcaaattt atgtaacaaa aagcatttat tgcttgaatg atagattatt aatcttgcat
    25621 ttgagcacga acgtttctaa tttcattttc aatatcttta agttgacgaa caagtgcgga
    25681 agtatctaaa ttcaaagatt cccgtttttc tatgtcacct tgaagacgaa cataatcata
    25741 tttaagttcg gctagttggt tttctaaaga catactataa cactcctttg aaatataatt
    25801 aagtgcattt aatgtagatt atagcatgaa acagtagact tctaaaatat ctgtggagta
    25861 tgttaaagtt ataaattatg aagattattg aaagaaggga taacagtgac agaacaattt
    25921 actatgatta ttttattaat tgcgcttggt tactttttga agcgcattaa ttttataaaa
    25981 gcaacagata gtcaagtcat tgctacatta gttcttaatg tcacactccc atctttagtt
    26041 attgtgaatt taaacagtgc agaattaaaa ttgtcattct ccattttacc aattttaatg
    26101 attatatatg gtattgtggc gaaaatgatt gctgtctggt tttttagaaa atatgataat
    26161 cacatgcgtg gatcagtagg tatgatgact ggtgctatga atattggatt gtttgcatat
    26221 ccactaattg aagtgatatg gcctaaaacg ggacttattt attttgttat ggctgatata
    26281 ggtggtgcct ttgtgatgtt tggaattact tactttgtag gtagctactt tagtgaaggt
    26341 agtgatcaat tcgattttaa atatttaggt aagaaattat tacaatcagt gccactcgtt
    26401 acatacattg taatgtttat attgaatata agtcacatcc atttaccaca tgtggcaatc
    26461 gatttcttta gcatactttc ccatgcaaat atgccgttat caatgatttt gctaggtgtc
    26521 atgttgaatt ttactctgga aagaaagtat atacctgcta ctattaaata tttatgtttg
    26581 cattatggat tagcattagt tgcgggattg ttagtatatg tgttgttacc agtatcagat
    26641 gatatgatta agacgacatt gttggtcact tggatgttcc cggtaggtgt tgcaattatt
    26701 tcttatggta ttcagtttaa atatcgaaca ctgccattta taggtatgac gaccaatttg
    26761 acaatcatta ttagtatcat tattttgtac gtgtatcagg cagtgtttgt ctagtttaca
    26821 catttgaaaa taaaatccat tttagtattc gtagaaaatg agagccccct ttaccacaat
    26881 atgtaaatgt atattgtgaa aagggggctt ttatttatga catagttgtt caactcatac
    26941 attcaagttg ataatgcagt gcgttatgca gctatccact tcatatgtat ggcgcatact
    27001 tgatatatga atatcatcaa gattttaaaa gtatcgctaa ttttaaagtc ttaaaacgca
    27061 tgattaatgt catgatgtgt tattgcgttt tgtttttaga gccacgtatt tcctaggaca
    27121 tatagaggaa cattcaacgt aaaattcccg aaaattaatt ttaatcattc tataagtgaa
    27181 tggttatttt cagaagtgat tacattttta cgttacatga gtatttaact ttctatttca
    27241 aattacctag aattatagca gctatcacga taataataat acctgcccaa atacccgtca
    27301 tctgacgacg atcttttctt tctcctaaaa tgaaaatacc gcctaaggtt gaaacgataa
    27361 caagtaactg tgataatgag aaacttgtag ctacaccaac ttttggttga gaatagaaca
    27421 tgaacaagtt accaattccc caaatcacac ctggcaatag attaagtgct gttgatttaa
    27481 gtgatgtttt atgattcatg gataggataa agccaccaat tgccataccg acagattgga
    27541 agaacaatgc atcagttcca ccaacaccaa agatgtcacc aagtacaacg aaacctacat
    27601 atccaactgt agatacaatt aaaataccca ttgctttttt aaattcagga ttatctgatt
    27661 gacgttcatt tttagcttta agtgaagtaa gtgctacacc agtaactaat aatatcatgg
    27721 cgattaaacc aaagataatt tgagtcattg aagaccattc acctaaaaag ataacgctga
    27781 ataatgttgt accaactaat tgcatacctg tagaaactgg catagtattt gatacaccga
    27841 ttaaactaat agatttaagc tgattcgctt gtccaaacgc ccataatgca ccagaaataa
    27901 gaccgacaat aattacagta ggattattga attttgcgaa accagtaata agtaaaccta
    27961 atccaacaat gagtgcgcct agcgtcgtac cacgaatttg gttgtaaggt ccaccgccga
    28021 cgaacacatt aataagaacg acacttcccc agaataaagc aggtaaaagt gcgattaaga
    28081 aatcaagaaa ttgcaagact actcactctc ctatactatt tatgcaagtg ctccccttaa
    28141 ttgacacttg catgttattg taaagcattc tgccctaata gtaaaaaaca actacttata
    28201 attttcaata tttacaaaaa gtagaaaaac ccacaataca tgctaatgat gtactgtagg
    28261 gtatttgctt ggtgttttat tcagggattg tttgatcttt tacgttacgt gattcgaatt
    28321 tgaatttaat gtactcatag ttgatatgga aacctagacc attaaatcgt tcgatgagtt
    28381 tattattttt attacgaatt ttaaaataaa cttttctaat atcaaaatta tcaaaagcat
    28441 attgcaatgc atacgcaagc aactcgaaag cgataccttt caaacggtaa tctacatgag
    28501 aactgaagta tttaatctcg gcgattgact gttgtgaatc aatttcaagg tataaataac
    28561 ctttaagtaa accttcgcta acaaataaaa acaaatgatg atggtcgtct aaactatcaa
    28621 tgatatcttg tggtgactgt gcctgatatt taaatgtagt tgtgtgtaat ttgctgaaag
    28681 cacgataaaa ccctttgtga taaggaatga tatttggttg gtgcatatct tcttctaatc
    28741 ttgtacgggc ttctatgtaa tagtcagtga agttataact tgcttgaata actttcatta
    28801 atggtttgta ttgttgaatg ccttcttcaa aagaaaagtt aaagacggca tcgtcaggtt
    28861 ggttcgaagt cattgcttta aatagcgttt caaacgtatc gacagataat acataattgt
    28921 cagccacgaa agggcctatg actttgaatt tatttttatc gtatgcaaaa gacaatatga
    28981 ttgctttgat tgaatcgttt tctttaatcg aaaatacacc aggtgattca atcgcatcgg
    29041 ttattaatac atctatttca ttgtactgtt gaggaagttt atataagtat gatgctgatt
    29101 cataattcga atgttcaatg aacgatttta tttgtgtaat atcatataac tgaactatgc
    29161 tcatgtcatt acctccgtac tttttgttac ttttattata tagtatttca actgaaatga
    29221 aagttaatag tgatattaac atgttacaat acatttaaca catcatttgc aatcattgaa
    29281 tttaaatcaa agattagtgg aatagatgaa gcacgttcga aataaaagaa cgtatgagaa
    29341 aggataattt atgaaatctt taatattagc tgaaaaacca tcagtcgcaa gagatattgc
    29401 tgatgcttta caaataaatc agaagcgtaa tggttacttt gaaaataacc aatatattgt
    29461 cacgtgggcg ttaggtcatc tagtgacaaa tgcgacacct gaacaatacg ataaaaattt
    29521 aaaggaatgg cgattagaag accttccaat tatacctaaa tatatgaaaa ctgttgttat
    29581 tggtaaaaca agcaaacaat ttaaaacagt aaaagcgtta attttagata ataaagtgaa
    29641 agatattatt attgcaacag atgctggacg agaaggtgaa ctagttgcaa gattgatttt
    29701 ggataaagtt ggtaacaaaa agccaatccg tcgattatgg attagctcag ttactaaaaa
    29761 agctattcaa caaggtttta aaaatttaaa agacggtcgt caatataacg atttgtatta
    29821 tgcagcgtta gcgagaagtg aggcagattg gattgttggg attaatgcaa cgcgtgcact
    29881 aacaacaaag tatgatgcac agctatccct gggacgtgtt cagacaccaa cgattcaatt
    29941 agtaaataca cgacaacaag agattaatca gttcaaacca caacaatact ttacattatc
    30001 attaacggta aaagggtttg attttcagct agaatcaaat cagcgatata ccaataaaga
    30061 aactttagaa cagatggtta ataatttgaa aaatgtcgat ggtaagatta aatctgttgc
    30121 tactaaacat aagaagtcgt atccgcaatc actgtacaat ttaacagatt tacaacaaga
    30181 tatgtataga cgttataaaa ttggacctaa agaaacattg aatacacttc aaagcttata
    30241 tgagagacat aaagtcgtaa cctatccaag aacagattca aactatttaa caactgatat
    30301 ggtagatact atgaaagaac gtattcaggc gacgatggca acaacatata aagaccaagc
    30361 acgcccatta atgtctaaaa cattttcatc aaaaatgtcg atatttaata atcaaaaagt
    30421 atctgatcac catgcaatta ttcctacaga agtgagacct gtcatgtcag acttaagtaa
    30481 tagagaatta aagttatacg atatgattgt cgagcgtttt ttagaagctt taatgcctcc
    30541 gcacgagtat gacgcgataa ctgtaacttt agaggttgca gggcacacat ttgttttgaa
    30601 agagaatgta acaactgttt taggttttaa atctattaga caaggtgaat ctattacaga
    30661 gatgcaacag cctttttcag aaggcgatga agtgaagatt tcaaaaacaa atattagaga
    30721 acatgaaaca acacctccag aatattttaa tgaaggttcg ttattaaaag cgatggagaa
    30781 ccctcagaac tttattcaat tgaaggataa aaaatatgcg caaactttaa aacaaacagg
    30841 tggtatcggc acagttgcaa caagggccga cattatcgat aaattattta atatgaatgc
    30901 cattgaatca agagacggta aaattaaagt aacgtcaaaa ggtaaacaaa tattagaatt
    30961 agcaccagaa gaattaacgt cgccactttt aactgcacaa tgggaagaaa aattactttt
    31021 aattgaacgt ggtaaatatc aggcgaaaac atttattaat gaaatgaaag attttacgaa
    31081 agatgttgta aatgggatta aaaatagtga tcgtaaatat aaacacgata atttaacaac
    31141 cacagaatgc ccaacgtgtg gtaaattcat gattaaagtt aaaactaaaa atggtcagat
    31201 gcttgtgtgc caagatccat cttgtaagac gaaaaagaat gtacagcgca aaacaaatgc
    31261 aagatgtcca aactgtaaaa agaaattaac gttgtttggt aaagggaaag aagcggtata
    31321 tcgttgtgtt tgtggacatt ctgaaacgca agcacatatg gatcagcgta tgaagtctaa
    31381 atcctctggt aaagtatctc gtaaagaaat gaaaaagtat atgaataaaa atgaaggttt
    31441 agacaataat ccgtttaaag atgcattaaa gaacttgaat ttatagataa aatcgaacaa
    31501 agttgaatca gaaaaacgaa aagttcgctt ttggtattgt tttttattaa gaatgatatt
    31561 aaactattaa ggtattttaa aaaaaggagc atccattcgt gaaaaactat ttccagttcg
    31621 ataaatatgg aacaaacttt aaaagagaaa tcttaggcgg tatcacaact ttcttatcta
    31681 tggcctatat tttagcagtt aacccgcaag ttttaagttt agcaggtgtt aaaggcgtat
    31741 cagaagatat gaaaatggac caaggtgcca tttttgtagc gactgcatta gcagcatttg
    31801 taggctcgct attcatgggg ctaatagcta aatatccaat tgcgttagca ccaggtatgg
    31861 gattaaatgc attctttgca tttactgttg tgttaaccat gggtattcct tggcaagttg
    31921 gtttaacagg cgttttattc tcaggtatat tctttgcgat attaaccgtc acagggttta
    31981 gggaagttat tattaatgca attccttatc aaatgaagat ggctgtttca gcaggtatag
    32041 gattattcat tacatttgta ggtttacaaa gttcgggtat tatagttaaa aatgaatcta
    32101 cattagtaac attgggacat ttaactgatc caccagtact tttggcgata ttcggtatcg
    32161 ttattacagt tattttatat gcaattaaat tgccgggttc tatctttatc ggtatgatca
    32221 tcacagcaat cgttggtatg ttcactggat tgattcaaat gccatctggt attgtgggta
    32281 agattccaag tattgaacca acgttcggtg ctgcatttga agcgtttaaa gacccaagtc
    32341 aattattaac gatacagttc ttaattgtta ttttaacgtt cttatttatt gatttctttg
    32401 atacagctgg tacattagta gctgttgcta ctcaagcagg tattatgaaa gataataaat
    32461 taccaagagc tggtagagca ttgttctcag attctttagc tacgattgta ggatcagttt
    32521 ttggaacaac tacaacaact tcttatatcg aatcaacttc aggtgttgct gtaggtgcta
    32581 gaacaggatt tgctagtatc gtaacaggtt gttgtttcct attagcgctg ttctttagtc
    32641 cgttaatcgc tgttgtaaca agtgcagtta cgacaccagc cttagtggtg gtaggtgtat
    32701 taatggctgc aaactttgct gagataaact ggaaaagttt tgaagttgca gtgccagcct
    32761 tcattacaat cattatgatg cctttatcat attcaattgc aactggtatt gcgtgtggat
    32821 ttattttcta tccaattaca atgcttatct ctaaaaaaca taaagaagta catccgataa
    32881 tgtatgtatt aatggtacta ttcattctgt acttcatatt tgttcatggt taaatccaga
    32941 cacaaaaaac gactgccaat gattggtagt cgtttttttc tttgaagtaa ggataaaata
    33001 agaagcgaaa taacataaag cgatattatg aatgtcttta aatatccgat ataaatatac
    33061 ttcttttaaa attgttggac gtgtttcttc tatattatat acctaattaa aaaggtttta
    33121 agaattattc tctatgtcca tctttgtatt gtgtgtaaat gacacgagca tttttattag
    33181 gtatataggt tggcgctgat aatacaacta ggacaaatag aatcattagg aaaaataaaa
    33241 tccaatgaat caaaattcct aagaagggga taatagctaa aaaactacct actataccaa
    33301 atattggaat aatcgctata ggtctaatcg cattttgtct attcactaat aatataatag
    33361 taagaattag ataaagtaat gcattaaaga gtaaaggctg ccatccaaaa cttaaaataa
    33421 acgttgcacc taaaaaagga atgccataga aaaactcaca aagtattaaa aagataccta
    33481 taagtgctaa agataatttt ggtccatttt tcatattcat tcaccaccgt tcttatgact
    33541 aattatatag aataattttc aatgataata ataaaatgat tcaaggtacg aatttacaat
    33601 aaagaaggaa ataaaaaata tctcgaaaat agttgaactg actaagtata taaagtaaaa
    33661 tataaaagta tgtgttagac agatagaaaa attatgtgaa aagccttgat ttatcgatgt
    33721 ttttcgtgta atataactaa cgttggactt taagaaaagc gatgaagcga aaggttactg
    33781 acacacccgg ccgctttgcc atggcgctgt gtaagatagt tttcgtggag aagtctatca
    33841 ctaaatgtag acgaataagg agggaaaatt atggcaaaac aaaaaatcag aatcagatta
    33901 aaagcttatg atcaccgcgt aattgatcaa tcagcagaga agattgtaga aacagcgaaa
    33961 cgttctggtg cagatgtttc tggaccaatt ccgttaccaa ctgagaaatc agtttacaca
    34021 atcatccgtg ccgtgcataa gtataaagat tcacgtgaac aattcgaaca acgtacacac
    34081 aaacgtttaa tcgatattgt aaacccaaca ccaaaaacag ttgacgcttt aatgggctta
    34141 aacttaccat ctggtgtaga catcgaaatc aaattataat agacaatttt aggaggtgga
    34201 ctttcgatga ccaaaggaat cttaggaaga aaaattggga tgacacaagt attcggagaa
    34261 aacggtgaat taatccctgt aacagtagta gaagctaaag aaaatgttgt attacaaaag
    34321 aaaactgtag aagttgatgg atacaacgca atccaagttg gatttgaaga caaaaaagca
    34381 tacaaaaaag atgcaaaatc taataaatat gctaataaac cagctgaagg tcacgctaaa
    34441 aaagctgacg cagcacctaa gcgcttcatt cgtgaattcc gcaatgtaga cgtggatgct
    34501 tacgaagtag gtcaagaagt ctcagtagat acttttgtag ctggcgacgt tattgacgta
    34561 acaggcgtat caaaaggtaa aggtttccaa ggtgcaatta aacgccacgg acaatctcgt
    34621 ggacctatgt cacacggttc tcatttccac agagcaccag gttctgtagg tatggcttca
    34681 gatgcttcta gagtatttaa aggccaaaaa atgccaggac gtatgggtgg aaacactgta
    34741 actgttcaaa acttagaagt agttcaagtt gacacagaaa acaaagttat cttagtaaaa
    34801 ggtaacgtac ctggacctaa aaaaggttta gtagaaatca gaacttcaat taaaaaaggt
    34861 aataaataat aagaagtgaa aggaggaaat gcataatggc taattatgat gttttaaaat
    34921 tagacggaac taaatcaggt tcaatcgaat taagcgatgc agtattcggt attgagccaa
    34981 ataatagcgt tttattcgaa gctattaatt tacaacgtgc ttcattacgt caaggtacgc
    35041 atgctgttaa gaatcgttca gcagtaagcg gtggcggacg taaaccatgg aagcaaaaag
    35101 gaacaggtcg tgctcgtcaa ggtacaatcc gtgctccaca atggcgtggc ggtggtatcg
    35161 tattcggacc aactccaaga agttatgcat acaaaatgcc taagaaaatg cgtcgtttag
    35221 ctttacgctc agcattatct ttcaaagctc aagagaatgg cttaactgta gttgacgcat
    35281 tcaacttcga agctccaaaa actaaagaat tcaaaaatgt attatctaca ttagaacaac
    35341 ctaaaaaagt attagtagtt actgaaaacg aagatgtaaa tgttgaatta tcagcacgca
    35401 acatccctgg cgttcaagtg acaactgctc aaggtttaaa tgttttagat atcactaatg
    35461 ctgacagctt agtaattact gaagctgctg ctaaaaaagt tgaggaggtg ctcggataat
    35521 ggaagcaaga gatattctta agcgccccgt aatcactgag aaatcttctg aagcaatggc
    35581 tgaagacaaa tacactttcg acgttgatac tcgtgttaac aaaacacaag taaaaatggc
    35641 agttgaagaa atcttcaacg taaaagttgc aagtgttaat atcatgaatt acaaacctaa
    35701 gaaaaaacgt atgggccgtt accaaggcta tacaaacaaa agaagaaaag cgattgtaac
    35761 tcttaaagaa ggatcaatcg acttatttaa ctaataaaac aattaccatt aaggaggtaa
    35821 gcgacaatgg ctattaaaaa gtataagcca ataacaaatg gtcgtcgtaa tatgacttcg
    35881 ttagatttcg cagaaatcac gaaaactaca cctgaaaagt cattattaaa accgctaccg
    35941 aaaaaagcgg gacgtaacaa ccaaggtaaa ttgactgtaa gacaccatgg tggtggacac
    36001 aaacgtcaat accgtgttat cgatttcaaa cgtaacaaag atggtatcaa tgcaaaagtt
    36061 gattctattc aatatgatcc aaaccgctca gcaaacatcg ctttagttgt atatgcagac
    36121 ggtgaaaaac gatatatcat tgctcctaaa ggattagaag taggtcaaat cgttgaaagt
    36181 ggtgctgaag ctgacatcaa agttggtaac gcattaccat tacaaaacat tccagttggt
    36241 acagtagtac acaacatcga gcttaaacct ggtaaaggtg gacaaatcgc tcgttcagct
    36301 ggtgcaagtg ctcaagtact tggtaaagaa ggtaaatacg tattaatcag attaagatct
    36361 ggtgaagttc gtatgatctt atctacttgc cgtgctacaa tcggtcaagt tggtaaccta
    36421 caacacgaat tagttaacgt tggtaaagcc ggacgttcaa gatggaaagg tatccgtcca
    36481 acagttcgtg gttctgtaat gaaccctaac gatcacccac acggtggtgg tgaaggtcgt
    36541 gctcctatcg gtagaccatc tccaatgtca ccatggggta aacctacgct tggtaagaaa
    36601 actcgtcgtg gtaaaaaatc atcagacaaa cttatcgttc gtggacgtaa gaaaaaataa
    36661 tataatcaac ttatttgggt gtgcggctta aagctgcacg cacataataa gaagggaggc
    36721 gcccaaatgg ctcgtagtat taaaaaagga cctttcgtcg atgagcattt aatgaaaaaa
    36781 gttgaagctc aagaaggaag cgaaaagaaa caagtaatca aaacatggtc acgtcgttct
    36841 acaattttcc ctaatttcat cggacatact tttgcagtat acgacggacg taaacacgta
    36901 cctgtatatg taactgaaga tatggtaggt cataaattag gtgagtttgc tcctactcgt
    36961 acattcaaag gacacgttgc agacgacaag aaaacaagaa gataatatct attaagtaga
    37021 ggaggacatc ctaatggaag caaaagcggt tgctagaaca ataagaatcg cacctcgtaa
    37081 agtaagacta gttcttgact taatcagagg taaaaatgct gctgaagcta ttgcaatttt
    37141 aaaattaaca aacaaagctt catcaccagt aattgaaaaa gtattaatgt ccgctttagc
    37201 taatgctgaa cataactatg acatgaacac agatgaatta gtagttaaag aagcatatgc
    37261 taacgaagga ccaacattaa aacgtttccg tccacgtgcg caaggtcgtg caagtgcgat
    37321 taacaaacgt acaagccaca ttacaatcgt cgtaagtgac ggtaaagaag aagctaaaga
    37381 agcttaatta acttttaagg agggaatact gtgggtcaaa aaattaatcc aatcggactt
    37441 cgtgttggta ttatccgtga ttgggaagct aaatggtatg ctgaaaaaga cttcgcttca
    37501 cttttacacg aagatttaaa aatccgtaaa tttattgata atgaattaaa agaagcatca
    37561 gtttctcacg tagagattga acgtgctgca aaccgtatca accttgcaat tcatactggt
    37621 aaacctggta tggtaattgg taaaggcggt tcagaaatcg aaaaattacg caacaaatta
    37681 aatgcgttaa ctgataaaaa agtacacatc aacgtaattg aaatcaaaaa agttgatctt
    37741 gacgctcgtt tagtagctga aaacatcgca cgtcaattag aaaaccgtgc ttcattccgt
    37801 cgtgtacaaa aacaagcaat cactagagct atgaaacttg gtgctaaagg tatcaaaact
    37861 caagtatctg gtcgtttagg cggagctgac atcgctcgtg ctgaacaata ttcagaagga
    37921 actgttccac ttcatacgtt acgtgctgac atcgattatg cacacgctga agctgacact
    37981 acttacggta aattaggcgt taaagtatgg atttatcgtg gagaagttct tcctactaag
    38041 aacactagtg gaggaggaaa ataataatgt tactaccaaa acgtgtaaaa tatcgtcgtc
    38101 aacatcgtcc taaaacaact ggtcgttcta aaggcggtaa ctacgtaaca tttggtgagt
    38161 ttggtttaca agctacaaca acgtcttgga tcacatctcg tcaaatcgaa tctgctcgta
    38221 tagcaatgac acgttacatg aaacgtggcg ggaaagtttg gattaaaatc ttcccacata
    38281 caccatatac taaaaaacct ttagaagtac gtatgggtgc tggtaaaggt gcggttgaag
    38341 gctggatcgc agttgttaaa ccaggtagaa ttttattcga agttgctggc gtttctgaag
    38401 aagttgcgcg tgaagcacta cgtttagcaa gtcacaaact tccagtaaaa actaagtttg
    38461 taaaacgtga ggaattgggt ggtgaaacaa atgaaagcta aggaaattag agacttaacc
    38521 acttcagaaa tcgaagaaca aatcaaatct tcaaaagaag agctttttaa cctacgcttt
    38581 cagttagcta caggtcaatt agaagaaact gcacgtattc gtacagtaag aaaaacgatt
    38641 gcacgtctaa aaactgttgc tcgtgaaaga gaaattgaac aaagtaaggc taatcaataa
    38701 ttaagtaaga ggaggttaca aaagtgagcg aaagaaacga tcgtaaagtt tatgtaggta
    38761 aagttgtttc agacaaaatg gacaagacta ttacagtact tgttgaaact tacaaaacac
    38821 acaaattata cggtaaacga gtaaaatact ctaaaaaata caaaactcat gatgaaaaca
    38881 attcagctaa attaggagac attgttaaaa ttcaagaaac tcgtccttta tcagcaacaa
    38941 aacgttttcg tttagtagag attgttgaag agtcagtaat tatttaatac aagtttagag
    39001 ataagggagg tttaactaat gatccaacaa gaaacacgct tgaaagtagc agacaactct
    39061 ggtgctcgtg aagttcttac aatcaaagta ttaggtggat ctggtcgtaa aacagcaaac
    39121 atcggcgatg ttatcgtatg tactgttaaa aatgcaacac caggtggcgt tgttaaaaaa
    39181 ggtgacgttg tcaaagctgt aatcgtacgt actaagtcag gtgttcgtcg taatgacggt
    39241 tcatacatca aatttgatga aaatgcatgt gttatcatcc gtgatgacaa aggcccacgt
    39301 ggtactcgta tcttcggacc tgttgctcgt gaattacgtg aaggtaactt catgaaaatc
    39361 gtatcattag caccagaagt actttaatta ataacaacca atacaaataa ggaggtgccc
    39421 acatgcatat caaaaaaggt gacaacgtta aagttatcgc aggtaaagac aaaggtaaag
    39481 aaggtaaagt aattgctact ctacctaaaa aagaccgtgt cgttgtggaa ggtgttaaca
    39541 ttatgaaaaa acaccaaaaa ccaactcaat taaatcctga aggtggaatc ttagaaacag
    39601 aggcagcaat ccatgtttct aatgtacaat tattggaccc taaaacaaac gaaccaactc
    39661 gtgtaggtta caaatttgtt gatggtaaaa aagttcgtat cgctaaaaaa tctggcgaag
    39721 aaattaaatc taataattaa taacaagttg aaaggaggat cccactttga accgtttaaa
    39781 agaaaagttt aacactgaag ttactgaaaa cttaatgaaa aaattcaatt atagttcagt
    39841 aatggaagta ccaaaaatag ataaaatcgt tgtgaacatg ggtgtaggtg acgcagtaca
    39901 aaattctaaa gtattagaca atgctgttga agaattagaa ttgatcactg gtcaaaaacc
    39961 attagtaact aaagctaaaa aatcaatcgc gactttccgt ttacgtgaag gtatgccaat
    40021 cggtgcgaaa gtaacacttc gcggtgaaag aatgtatgaa ttcttagaca aattaatttc
    40081 agtatcatta ccacgtgtac gtgacttcca aggtgtttct aaaaaagcat ttgacggacg
    40141 cggtaactac actttaggtg ttaaagaaca attaattttc ccagaaatcg actatgataa
    40201 agtaagtaaa gttagaggaa tggatattgt tatcgtaacg actgctaaca ctgatgaaga
    40261 agctcgtgaa ttgttagcta acttcggtat gccattccgt aaataattat ttaaaggagg
    40321 ctaattaagt ggctaaaact tcaatggttg ctaagcaaca aaaaaaacaa aaatatgcag
    40381 ttcgtgaata cactcgttgt gaacgttgtg gccgtccaca ttctgtatat cgtaaattta
    40441 aattatgccg tatttgtttc cgtgaattag cttacaaagg ccaaatccct ggcgttcgta
    40501 aagctagctg gtaataaaaa agagtctgaa aggaggcaac aatcaatgac aatgacagat
    40561 ccaatcgcag atatgcttac tcgtgtaaga aacgcaaaca tggtgcgtca cgagaagtta
    40621 gaattacctg catcaaatat taaaaaagaa attgctgaaa tcttaaagag tgaaggtttc
    40681 attaaaaatg ttgaatacgt agaagatgat aaacaaggtg tacttcgttt attcttaaaa
    40741 tatggtcaaa acgatgagcg tgttatcaca ggattaaaac gtatttcaaa accaggttta
    40801 cgtgtttatg caaaagctag cgaaatgcct aaagtattaa atggtttagg tattgcatta
    40861 gtatcaactt ctgaaggtgt aatcactgac aaagaagcaa gaaaacgtaa tgttggtgga
    40921 gaaattatcg catacgtttg gtaataaaaa ataaggaggt gccataacat gagtcgtgtt
    40981 ggtaagaaaa ttattgacat ccctagtgac gtaacagtaa cttttgatgg aaatcatgta
    41041 actgttaaag gtcctaaagg tgaattatca agaactttaa atgaaagaat gacattcaaa
    41101 caagaagaaa acacaattga agttgtaaga ccatctgatt ctaaagaaga tagaacaaac
    41161 catggtacaa ctcgtgcttt attaaacaat atggtacaag gtgtttctca aggatacgta
    41221 aaagtacttg aacttgttgg tgtaggttac cgtgctcaaa tgcaaggtaa agacttaatc
    41281 cttaacgttg gttattctca cccagtagaa attaaagctg aagaaaacat tactttctca
    41341 gttgagaaaa acacagtcgt taaagttgaa ggtatttcaa aagaacaagt tggagcatta
    41401 gcatctaaca tccgttcagt aagacctcca gagccttaca aaggtaaagg tattcgttac
    41461 caaggtgaat acgttcgccg taaagaaggt aaaactggta aataatagat aaactctaaa
    41521 gaaaggagta ttgaaatgat cagtaaaatt gataaaaata aagtgcgttt aaaaagacat
    41581 gctcgtgttc gtactaactt atcaggtaca gctgaaaagc cacgtttaaa cgtatatcgt
    41641 tcaaacaagc atatctacgc tcaaattatt gatgataata aaggcgtaac attagctcaa
    41701 gcttcttcaa aagacagcga cattgctact acagcaacta aagttgaatt agcaactaaa
    41761 gtcggtgaag caattgctaa aaaagctgct gacaaaggca ttaaagaaat cgtatttgac
    41821 cgtggaggat atttatatca cggacgtgtt aaagcattag ctgaagcagc aagagaaagc
    41881 ggattagaat tttaatttaa aggagggaca aatacatggc tcgtagagaa gaagagacga
    41941 aagaatttga agaacgcgtt gttacaatca accgtgtagc aaaagttgta aaaggtggtc
    42001 gtcgtttccg tttcactgca ttagttgtag ttggagacaa aaatggtcgt gtaggtttcg
    42061 gtactggtaa agctcaagag gtaccagaag caatcaaaaa agctgttgaa gcagctaaaa
    42121 aagatttagt agttgttcca cgtgttgaag gtacaactcc acacacaatt actggccgtt
    42181 acggttcagg aagcgtattt atgaaaccgg ctgcacctgg tacaggagtt atcgctggtg
    42241 gtcctgttcg tgccgtactt gaattagcag gtatcactga tatcttaagt aaatcattag
    42301 gatcaaacac accaatcaac atggttcgtg ctacaatcga tggtttacaa aaccttaaaa
    42361 atgctgaaga tgttgcgaaa ttacgtggca aaacagtaga agaattatac aattaaggag
    42421 ggaaaactag ttatggctaa attacaaatt accctcactc gtagtgttat tggtcgtcct
    42481 gaaacacaac gtaaaactgt tgaagcttta ggtcttaaaa agactaacag ttcagtagtt
    42541 gttgaagata accctgctat tcgtgggcaa atcaacaaag ttaagcactt agtaacagta
    42601 gaagaaaaat aatcaaggag gtgccgaaat gaaattacat gagttaaaac cggcagaagg
    42661 ttcacgtaaa gaacgcaatc gtgttggacg tggtgttgcg acaggtaacg gtaaaacaag
    42721 tggtcgcgga cacaaaggtc aaaaagctcg ttcaggcggt ggtgtaagac caggatttga
    42781 aggtggtcaa ttaccattat tccgtcgttt accaaaacgt ggttttacta acataaatcg
    42841 taaagaatat gctattgtta acttagacca acttaataaa tttgaagatg gtactgaagt
    42901 aactccagct ttattagtag aatctggtgt tgttaagaat gaaaaatctg gtatcaaaat
    42961 actaggtaat ggttcacttg ataagaaatt gacagtgaaa gctcataaat tctcagcttc
    43021 agcagcagaa gctattgatg ctaaaggtgg agcacacgag gtgatctaat gattcaaacc
    43081 cttgtgaact tctttagaac aaaagaggtt cgtaacaaga ttttcttcac actagcaatg
    43141 ttagtaattt ttaaaatagg gacttatata ccagctccag gagtaaatcc tgcagctttt
    43201 gataatcccc aaggttctca aggtgccact gagttattaa atacttttgg tggcggagcc
    43261 ttgaaacgat tttctatttt tgcaatgggt attgtaccct acatcactgc atcaatcgta
    43321 atgcaattat tacaaatgga tattgtccct aaattctcag aatgggcaaa acaaggtgaa
    43381 gtaggtagaa gaaagttaaa taacgttact cgttatttag caatttcttt agcatttatc
    43441 caatctatag gtatggcatt ccaatttaat aattatctca aaggtgcgct gattatcaat
    43501 cagtcaatta tgagttattt attaatagca ctagttttga cagcaggaac tgctttctta
    43561 atatggcttg gtgatcaaat cactcagttc ggtgttggta atggtatttc tattatcata
    43621 tttgcgggta ttttatcaac gttgccagcc agtctaattc aatttggaca aactgcgttc
    43681 gttgggcaag aagatacatc attagcatgg ttgaaagtat taggactttt agtgtcactg
    43741 atactattaa ctgtaggtgc tatttatgta cttgaagccg ttcgtaaaat tccgattcaa
    43801 tatgctaaga aacaaactgc tcaaagatta ggttcacagg caacttatct acctttaaaa
    43861 gtgaactcag ccggtgttat tcctgtaatc tttgcaatgg cgttcttctt actgcctaga
    43921 acattaacgt tgttctatcc agataaagaa tgggcacaaa acattgcgaa tgctgcaaat
    43981 ccttcaagta atgttggtat ggttgtatat attgtactaa ttatactatt cacatacttc
    44041 tatgcatttg tacaagttaa tccggaaaaa atggctgata accttaagaa acaaggtagc
    44101 tatgttccag gtattagacc tggtgaacaa accaaaaaat atattactaa agttttatat
    44161 cgtttaactt ttgtaggttc tatcttctta gccgttattt caattctacc gatattagca
    44221 actaagttta tgggattacc acaatcaatt cagattggtg gtacaagttt acttatcgtt
    44281 attggtgtag cgattgaaac aatgaaatct ttagaagctc aagtatctca aaaagaatat
    44341 aaaggctttg gtggtagata attttaggag ggcacttatg aatatcattt tgatgggttt
    44401 acctggcgca ggtaaaggaa ctcaagcaag tgaaattgtc aagaaattcc caatacccca
    44461 catttcaact ggtgacatgt tcagaaaagc tataaaagaa gaaactgaat taggtaaaga
    44521 agctaagtct tatatggacc gtggcgaatt agttcctgat gaagtgactg taggtatcgt
    44581 taaggaaaga atttctgaag acgatgcaaa aaaaggcttt ttattagatg gcttcccaag
    44641 aacaatcgag caagctgagg cattaaataa tattatgtct gagcttgaca gaaacattga
    44701 tgctgtcatc aatatcgaag ttccggaaga agaattaatg aaccgtctta caggtcgtcg
    44761 aatctgtgag tcatgtggta caacgtatca tcttgtattt aatcctccga aggtcgaagg
    44821 tatttgtgat atcgatggtg gtaaattgta tcaacgagaa gatgataatc ctgaaacggt
    44881 agctaatcgt ttgagtgtta atattaaaca atctaagcct attttagatt tctatgatca
    44941 aaaaggtgta ttgaaaaata ttgatggttc aaaagatatt agcgacgtta ccaaagatgt
    45001 cattgatatt ttagatcatt tgtaatagat caacttttag cggtctattt taagtgaggc
    45061 atgatttaat catattagat agatgagagt ggcaattaac gataattaat tcccgtaatt
    45121 tttgtttaac ttataaaatt aatcactgat agattcgtaa caataaagtt gtctattgac
    45181 gattacctta ctattgcaaa aagggggaag ttaatcaatg gctaaacaag atgtaattga
    45241 attagaaggt actgtattag atactttacc gaacgcaatg tttaaagtag aattagaaaa
    45301 tggtcatgag attttagctc acgtaagtgg taaaatcaga atgaattaca ttcgtattct
    45361 acctggcgac aaagtaactg ttgagatgtc tccgtacgat ttaacacgcg gaagaattac
    45421 ttatcgttat aaataatcgt cactccataa tatagggagg tataaaaatg aaagtaagac
    45481 catcagtaaa acctatttgc gaaaaatgta aagtcattaa acgtaaaggt aaagtaatgg
    45541 taatttgtga aaatccaaaa cacaaacaaa gacaaggtta ataaaagaga ggtgtaaatt
    45601 aatatggcac gtattgcagg agtagatatt ccacgtgaaa aacgcgtagt tatctcatta
    45661 acttatatat acggtatcgg tacgtcaact gctcaaaaaa ttcttgaaga agctaacgta
    45721 tcagctgata ctcgtgtgaa agatttaact gatgacgaat taggtcgcat ccgtgaagtt
    45781 gtagacggtt ataaagtcga aggtgactta cgtcgtgaaa ctaacttaaa tatcaaacgt
    45841 ttaatggaaa tttcatcata ccgtggtatc cgtcaccgtc gtggtttacc agttcgtggt
    45901 caaaaaacga aaaacaacgc gcgtactcgt aaaggaccag ttaaaacggt agctaacaag
    45961 aaaaaataat aggtaaagga ggcaaatttt aaatggcacg taaacaagta tctcgtaaac
    46021 gtagagtgaa aaagaatatt gaaaatggtg tagcacacat ccgttcaaca ttcaacaaca
    46081 ctattgtaac tatcactgat gagttcggta atgctttatc atggtcatca gctggtgcat
    46141 taggattcaa aggatctaaa aaatcaacac catttgcagc acaaatggct tctgaaactg
    46201 catctaaatc agctatggag catggtttaa aaacagttga agtaacagtt aaaggacctg
    46261 gtccaggtcg tgaatcagct attcgtgcat tacaatctgc aggtttagaa gtaactgcga
    46321 tcagagacgt tactccagta cctcataacg gttgtcgtcc accaaaacgt cgtcgtgtat
    46381 aatttatgat ggtattgtta caggtcactg agcaaacatt ttaaattaag tcgacgtata
    46441 taaggaggat atttaaatga tagaaatcga aaaacctaga attgagacaa ttgaaattag
    46501 tgaagatgct aaattcggta agttcgttgt tgaaccacta gaacgtggct acggtactac
    46561 actaggaaac tccttacgtc gtatcctact atcttcatta ccaggtgcag ccgttaagta
    46621 tattgaaatt gagggagttt tacatgaatt ctcagcagta gacaatgtag ttgaagatgt
    46681 ttctacaatt attatgaaca ttaaacaatt agcattgaaa atttactctg aagaagataa
    46741 aactttagaa attgatgtac gtgatgaagg cgaagtaaca gcaagcgaca ttacacatga
    46801 tagtgatgtt gaaattttaa acccagagct taaaattgca acagtatcta aaggtggtca
    46861 cttaaaaatt cgtctagttg ctaacaaggg tagaggttac gcattagcag aacaaaataa
    46921 tactagtgat ttaccaattg gtgtaatccc tgttgattca ttgtattcac ctgttgaacg
    46981 tgtgaactat actgttgaaa atacacgtgt aggtcaaagc agtgattttg ataaattaac
    47041 attggatgtt tggactaatg gttcaatcac accacaagaa tcagtttcat tagcagcaaa
    47101 aataatgact gaacacttga atatcttcgt tggtcttact gatgaagcgc aaaacgctga
    47161 aatcatgatt gaaaaagaag aagatcaaaa agaaaaagta ttagaaatgt ctattgaaga
    47221 attagactta tctgtacgtt catataactg cttaaaacgc gcaggaatca attctgttca
    47281 agagttagct gacaaatctg aagctgacat gatgaaagtg cgtaatttag gtcgtaaatc
    47341 tttagaagaa gttaaataca aattagaaga tttaggatta ggattaagaa aagaagattg
    47401 ataaaggagg ttaactcatg ggttacagaa aattaggtcg tacttctgat caacgtaaag
    47461 ctatgttacg tgacttagct acatcactta ttattagtga acgtattgaa actacagaag
    47521 ctcgtgcaaa agaagttcgc agtgttgttg agaaattaat cactttaggt aaaaaaggag
    47581 atttagcttc tcgtcgtaat gcagctaaaa ctttacgtaa tgttgaaatc ttaaacgaag
    47641 atgaaactac acaaactgca cttcaaaaat tatttggtga aatcgcagag cgttacacag
    47701 aacgtcaagg tggttacact cgtattctta aacaaggccc tcgtcgcggt gacggtgctg
    47761 aatcagtaat tatcgaatta gtataagaat ttatataaat acactaacta cttttatata
    47821 aagcaaatga gtgcaacgat aatgtttgcc acatacaaat attgtctagc tcagagtacc
    47881 ccatcaacta aataaagatt taaagcgtga actcaacaaa cttatgatgg ggtgcgcgct
    47941 tttttattga ataaaatatc ggacttatga acagaaatgt ttttaagtcc gatttcttta
    48001 tatttacttt tttgagtgcg aatctaaaaa tatgatgaag ctagtttgat caatttcact
    48061 agaactgaat gaagtgaaag tattatcgtt gaatcaaacg cgaccacccc tatattagta
    48121 aatcatttat tttattaacg tttatacata attgttagag aggaataaaa gtccttatca
    48181 ttagttgtta aacaacactt taaagactag aaatgagtca gaaaatacta gtaatatata
    48241 gagaacccag tcaatgtcat atacagcgat ttataaatat tgtaaaatat gatagataca
    48301 cgaatcgtaa aggagagaga caagtggagg ataagaattc agttattgta tttaaaaatg
    48361 tttcatttca atatcaaagt gatgcatcct tcacattgaa agatgtttct tttaatatac
    48421 ctaaaggtca gtggacatct attgttggtc ataacggttc tggaaaatct acaattgcca
    48481 agttaatgat tggcatagag aaagttaaat ctggagaaat tttttataat aatcaagcta
    48541 taactgatga taattttgaa aagttaagaa aagacatagg aattgtattt cagaatccgg
    48601 ataatcaatt tgttggttca attgtaaaat acgatgtggc atttggactc gaaaatcatg
    48661 cggttccata tgacgaaatg catagaagag tcagcgaagc acttaaacaa gttgatatgt
    48721 tagaacgtgc agattatgaa cctaatgcat tatcgggggg acagaagcag cgtgtggcta
    48781 tagcaagtgt attagcactt aacccctctg tcattatatt agatgaggcg acttctatgt
    48841 tagatcctga tgcacgtcaa aatttattgg atttagtgag aaaagttaaa tcagaacata
    48901 atattacaat catttctatt acgcatgatt tatctgaggc gatggaagca gatcatgtta
    48961 tcgttatgaa taaagggact gtctataaag aaggcacagc gactgaaatt ttcgacaatg
    49021 cagaagagtt aacaagaata ggtctagatt tgccattccc aatcaaaata aatcaaatgc
    49081 tgggacacca aacatcattc ttaacttatg aagggctggt ggatcaacta tgactatacg
    49141 gtttgacaat gtaagttata cctatcaaaa agggacacca tatcagcatc aagctattca
    49201 tgatgttaat acagaatttg aacaaggtaa atattacgcc atcgttggac aaacgggtag
    49261 tggtaaatca acgttgatac aaaatattaa tgcgctgtta aagccgacta ctgggacagt
    49321 tacagttgat gacattacta ttacacataa gaccaaagat aaatatatta gacctgtaag
    49381 aaaaagaatt ggaatggtat ttcaatttcc cgaatctcaa ttatttgagg acacagtaga
    49441 gcgtgaaatg atatttggac ctaaaaactt taaaatgaat ttagatgaag ccaaaaacta
    49501 tgcccatcgt ctgttgatgg atttaggctt ttcaagagat gtaatgtcac aatcaccatt
    49561 tcaaatgtca ggtggacaaa tgcgtaaaat agcgattgta tcgatattgg caatgaatcc
    49621 tgatattatc gtggttgatg aacctacagc aggacttgat ccacaaagta aacgacaagt
    49681 aatgagatta ctaaagtcac tacaaacaga tgaaaataag gcaattatcc taatttcaca
    49741 tgatatgaat gaagtcgcgc gttatgcaga tgaagtcatc gttatgaaag aaggtagtat
    49801 agtgtcgcaa acatcaccaa aagagctctt caaagataaa aaaaaattgg cggattggca
    49861 tattggtttg ccagaaattg ttcagttaca atatgacttt gaacaaaaat atcaaacaaa
    49921 attaaaagat attgccttaa ctgaagaagc atttgtaagc ttgtataagg agtggcaaca
    49981 tgaaaaataa attgattata gggcgatatt taccaattaa ttcttttgtt catcatcttg
    50041 atccaagagc aaagttaatg tttgtttttc tttttattat attaatattt ttctgtcatt
    50101 caccattaac atatctttgg gtgtttgcac ttatcttatt cattatgaga ttagcaaaaa
    50161 ttcaattatg gttcctaatc aaaggtttaa caccaatatt tttcttttta attttcacat
    50221 taatgatgca tatattttta actaaaggtg gatatgtatt agttgaatgg catggcatca
    50281 cgattgaaac taatggtatt ttagaagggc tatatatatc actgcgttta attgggattg
    50341 taatgattgc aacaattatg acactatcta caagtccaat tgatttaaca gatgcgtttg
    50401 aaagattact tgcaccacta aagatgttta aattaccagt tcatcaatta agtatgataa
    50461 tgtccattgc gttacgattc atcccgacgt taatggatga gttagataaa atcattttgg
    50521 cgcaaaagtc gcgtggttct gaaataagtt cagggaacat tgcaacacgt attaaatcat
    50581 ttattccatt actagtgcca ctattcatct cagctttcca acgcgccgaa gaattagcgg
    50641 tcgcaatgga agttaggggt tatgatgcca atgttaagag aacgagctac agacagctta
    50701 aatggcaatt gagagatacg atatctttaa ccatgattat cccaattgca attattttat
    50761 tcgtattaaa atattcagga gtgtaaattc atgcgtatat tagtagaaat tgcgtatcaa
    50821 ggaaataatt ttctaggttt tcaaattcaa caaaatggtc gaacggtaca gcaacaattt
    50881 gaaaagctat tacaacgcat gcataaaaga catgtgagaa tccatccttc aagtaggact
    50941 gatagaggtg tacatgcgat acagcaatac tttcatttcg acacagagct gaatatacct
    51001 atgtcacaat ggcaatatgc aatgaaccga acgttacctg atgatattta tgtcaacaat
    51061 gtagttacag tcgatgacga ttttcattgt cgttatgatt gtgtaggtaa acgttatcgc
    51121 tacaaagtat atcaagcaca acaccgcgat ccatttcaaa gtggtttgaa aacatttatt
    51181 cctgaaacgt tggatttagg taaaatgaac agagcggcgc aacaattcat aggtacacat
    51241 gattttacgg gattttgttc gcaaaaaact gaagtagaaa gcaaagttag aacattatac
    51301 caaagtgaaa tcgtaaagac agatgatggc tttgattata ttgtcactgg atctggattt
    51361 ttatataaca tggtgcgtgt cttagttgca tttttaatag aagttggaaa agggcgacat
    51421 gaagtatctg atgtaccaaa acttcttgaa tcaaagaatc gtaagaatgt acctttcact
    51481 gcaccggctg aaggattata tttagagaaa atttatttag atgaaaatga gttattaaaa
    51541 gactttggta acgatatcaa aatacatcgt aaaaaatcat tacaaaatga ctgattgcca
    51601 ttgacaaaaa gcttgtgaaa ttataagatt attaacggta ttgttttata tccaccccac
    51661 gataagcccc ggaaacttat tgtgttacaa gatatataag cagaaacgaa caacagttaa
    51721 caaaataaat gaaattaaac gttttaaaaa tgaaacaaat gaaatcatct attaggttat
    51781 gaaactgttt atagcttgaa tagaagcatt tattttttag gaggacaatt attatgcgtc
    51841 aaacatttat ggcaaatgaa tcaaacattg agcgcaaatg gtatgttatc gatgctgaag
    51901 gccaaacatt aggtcgttta tcatcagaag tagcatctat cttacgcggt aaaaataaag
    51961 taacttacac accacacgtt gatactggtg attatgtaat cgttattaat gcatcaaaaa
    52021 tcgaatttac tggtaacaaa gaaactgaca aagtttacta ccgtcactca aatcacccag
    52081 gtggtatcaa atcaatcact gctggtgaat taagaagaac taacccagaa cgtttaattg
    52141 aaaactcaat taaaggtatg ttaccaagca ctcgtttagg cgaaaaacaa ggtaaaaaat
    52201 tatttgtata tggtggcgct gaacatccac acgctgcaca acaaccagaa aactacgaat
    52261 tacgtggtta attagaagga ggaaatgact ttggcacaag ttgaatatag aggcacaggc
    52321 cgtcgtaaaa actcagtagc acgtgtacgt ttagtaccag gtgaaggtaa catcacagtt
    52381 aataaccgtg acgtacgcga atacttacca ttcgaatcat taattttaga cttaaaccaa
    52441 ccatttgatg taactgaaac taaaggtaac tatgatgttt tagttaacgt tcatggtggt
    52501 ggtttcactg gacaagctca agctatccgt cacggaatcg ctcgtgcatt attagaagca
    52561 gatcctgaat acagaggttc tttaaaacgc gctggattac ttactcgtga cccacgtatg
    52621 aaagaacgta aaaaaccagg tcttaaagca gctcgtcgtt cacctcaatt ctcaaaacgt
    52681 taattgtcgg acgatatata caaaacacct cgatattatg tcgaggtgtt tttttgcgtt
    52741 tttgcggcga atatggaatg tgtagaatat aaatgaattt ttaccttccc accataaaag
    52801 atgaagaacc atgaaatgtg gagaacaata aatagttgat attctgttat ttttttggaa
    52861 gtgaagtgat ttgaatactt tactctaaac gataaaaggt taaaaaaaca acaaaaagaa
    52921 aatattactg tcataattgg aaatacaccg tattctgctg gtcaatctag tgtaaataat
    52981 gataataaaa aaatgaatat gaaaaattaa atgcaaaaat agcaaatacc tatgcaaatt
    53041 tttcaacagc
//
LOCUS       DALPQQ010000004        49872 bp    DNA     linear   BCT 22-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus strain K18-6-464
            SAMD00233528-rid16434743.denovo.004, whole genome shotgun sequence.
ACCESSION   DALPQQ010000004 DALPQQ010000000
VERSION     DALPQQ010000004.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMD00233528
            Sequence Read Archive: DRR236061
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 49872)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 49872)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001543423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001543423.1
            Genome Coverage       :: 77x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/22/2022 17:09:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,811
            CDSs (total)                      :: 2,743
            Genes (coding)                    :: 2,689
            CDSs (with protein)               :: 2,689
            Genes (RNA)                       :: 68
            rRNAs                             :: 2, 4, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 4, 2 (16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 54
            CDSs (without protein)            :: 54
            Pseudo Genes (ambiguous residues) :: 0 of 54
            Pseudo Genes (frameshifted)       :: 27 of 54
            Pseudo Genes (incomplete)         :: 27 of 54
            Pseudo Genes (internal stop)      :: 10 of 54
            Pseudo Genes (multiple problems)  :: 10 of 54
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..49872
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMD00233528-rid16434743.denovo.004"
                     /strain="K18-6-464"
                     /db_xref="taxon:1280"
                     /geo_loc_name="Japan: Niigata"
     gene            345..1241
                     /gene="xerC"
                     /locus_tag="O7798_000193"
     CDS             345..1241
                     /gene="xerC"
                     /locus_tag="O7798_000193"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499760.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine recombinase XerC"
                     /protein_id="HDC2862473.1"
                     /translation="MNHIQDAFLNTLKVERNFSEHTLKSYQDDLIQFNQFLEQEHLEL
                     NTFEYRDARNYLSYLYSNHLKRTSVSRKISTLRTFYEYWMTLDENIINPFVQLVHPKK
                     EKYLPQFFYEEEMEALFKTVEEDTSKNLRDRVILELLYATGIRVSELVNIKKQDIDFY
                     ANGVTVLGKGSKERFVPFGAYCRQSIENYLEHFKPIQSCNHDFLIVNMKGEAITERGV
                     RYVLNDIVKRTAGVSEIHPHKLRHTFATHLLNQGADLRTVQSLLGHVNLSTTGKYTHV
                     SNQQLRKVYLNAHPRAKKENET"
     gene            1238..1783
                     /gene="hslV"
                     /locus_tag="O7798_000194"
     CDS             1238..1783
                     /gene="hslV"
                     /locus_tag="O7798_000194"
                     /EC_number="3.4.25.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499761.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent protease subunit HslV"
                     /protein_id="HDC2862474.1"
                     /translation="MSNTTLHATTIYAVRHNGKAAMAGDGQVTLGQQVIMKQTARKVR
                     RLYEGKVLAGFAGSVADAFTLFEKFETKLQQFSGNLERAAVELAQEWRGDKQLRQLEA
                     MLIVMDKDAILVVSGTGEVIAPDDDLIAIGSGGNYALSAGRALKRHASHLSAEEMAYE
                     SLKVAADICVFTNDNIVVETL"
     gene            1849..3252
                     /gene="hslU"
                     /locus_tag="O7798_000195"
     CDS             1849..3252
                     /gene="hslU"
                     /locus_tag="O7798_000195"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499762.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent protease ATPase subunit HslU"
                     /protein_id="HDC2862475.1"
                     /translation="MDTAGIRLTPKEIVSKLNEYIVGQNDAKRKVAIALRNRYRRSLL
                     DEESKQEISPKNILMIGPTGVGKTEIARRMAKVVGAPFIKVEATKFTEVGYVGRDVES
                     MVRDLVDVSVRLVKAQKKSLVQDEATAKANEKLVKLLVPSMKKKASQTNNPLESLFGG
                     AIPNFGQNNEDEEEPPTEEIKTKRSEIKRQLEEGKLEKEKVRIKVEQDPGALGMLGTN
                     QNQQMQEMMNQLMPKKKVEREVAVETARKILADSYADELIDQESANQEALELAEQMGI
                     IFIDEIDKVATNNHNSGQDVSRQGVQRDILPILEGSVIQTKYGTVNTEHMLFIGAGAF
                     HVSKPSDLIPELQGRFPIRVELDSLSVEDFVRILTEPKLSLIKQYEALLQTEEVTVNF
                     TDEAITRLAEIAYQVNQDTDNIGARRLHTILEKMLEDLSFEAPSMPNAVVDITPQYVD
                     DKLKSISTNKDLSAFIL"
     gene            3277..4050
                     /gene="codY"
                     /locus_tag="O7798_000196"
     CDS             3277..4050
                     /gene="codY"
                     /locus_tag="O7798_000196"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499763.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GTP-sensing pleiotropic transcriptional
                     regulator CodY"
                     /protein_id="HDC2862476.1"
                     /translation="MSLLSKTRELNTLLQKHKGIAVDFKDVAQTISSVTVTNVFIVSR
                     RGKILGSSLNELLKSQRIIQMLEERHIPSEYTERLMEVKQTESNIDIDNVLTVFPPEN
                     RELFIDSRTTIFPILGGGERLGTLVLGRVHDDFNENDLVLGEYAATVIGMEILREKHS
                     EVEKEARDKAAITMAINSLSYSEKEAIEHIFEELGGTEGLLIASKVADRVGITRSVIV
                     NALRKLESAGVIESRSLGMKGTFIKVKKEKFLDELEKSK"
     gene            4101..4193
                     /locus_tag="O7798_000197"
     CDS             4101..4193
                     /locus_tag="O7798_000197"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499764.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDC2862477.1"
                     /translation="MAVVNEMTLMIMLKSFLYFCLIFNQIDISH"
     gene            4392..5159
                     /gene="rpsB"
                     /locus_tag="O7798_000198"
     CDS             4392..5159
                     /gene="rpsB"
                     /locus_tag="O7798_000198"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015900141.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S2"
                     /protein_id="HDC2862478.1"
                     /translation="MAVISMKQLLEAGVHFGHQTRRWNPKMKKYIFTERNGIYIIDLQ
                     KTVKKVDEAYNFLKQVSEDGGQVLFVGTKKQAQESVKSEAERAGQFYINQRWLGGLLT
                     NYKTISKRIKRISEIEKMEEDGLFEVLPKKEVVELKKEYDRLIKFLGGIRDMKSMPQA
                     LFVVDPRKERNAIAEARKLNIPIVGIVDTNCDPDEIDYVIPANDDAIRAVKLLTAKMA
                     DAILEGQQGVSNEEVAAEQNIDLDEKEKSEETEATEE"
     gene            5193..5306
                     /locus_tag="O7798_000199"
     CDS             5193..5306
                     /locus_tag="O7798_000199"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499766.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDC2862479.1"
                     /translation="MGDKILMLITFFKKKIEANYKYSIRVLAILPIIMLKS"
     gene            5341..6222
                     /locus_tag="O7798_000200"
     CDS             5341..6222
                     /locus_tag="O7798_000200"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499767.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor Ts"
                     /protein_id="HDC2862480.1"
                     /translation="MATISAKLVKELREKTGAGMMDCKKALTETDGDIDKAIDYLREK
                     GIAKAAKKADRIAAEGLVHVETKGNDAVIVEINSETDFVARNEGFQELVKEIANQVLD
                     TKAETVEALMETTLPNGKSVDERIKEAISTIGEKLSVRRFAIRTKTDNDAFGAYLHMG
                     GRIGVLTVVEGSTDEEAARDVAMHIAAINPKYVSSEQVSEEEINHEREVLKQQALNEG
                     KPENIVEKMVEGRLRKYLQEICAVDQDFVKNPDVTVEAFLKTKGGKLVDFVRYEVGEG
                     MEKREENFADEVKGQMK"
     gene            6359..7081
                     /locus_tag="O7798_000201"
     CDS             6359..7081
                     /locus_tag="O7798_000201"
                     /EC_number="2.7.4.22"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000057332.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UMP kinase"
                     /protein_id="HDC2862481.1"
                     /translation="MAQISKYKRVVLKLSGEALAGEKGFGINPVIIKSVAEQVAEVAK
                     MDCEIAVIVGGGNIWRGKTGSDLGMDRGTADYMGMLATVMNALALQDSLEQLDCDTRV
                     LTSIEMKQVAEPYIRRRAIRHLEKKRVVIFAAGIGNPYFSTDTTAALRAAEVEADVIL
                     MGKNNVDGVYSADPKVNKDAVKYEHLTHIQMLQEGLQVMDSTASSFCMDNNIPLTVFS
                     IMEEGNIKRAVMGEKIGTLITK"
     gene            7100..7654
                     /gene="frr"
                     /locus_tag="O7798_000202"
     CDS             7100..7654
                     /gene="frr"
                     /locus_tag="O7798_000202"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499769.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome recycling factor"
                     /protein_id="HDC2862482.1"
                     /translation="MSDIINETKSRMQKSIESLSRELANISAGRANSNLLNGVTVDYY
                     GAPTPVQQLASINVPEARLLVISPYDKTSVADIEKAIIAANLGVNPTSDGEVIRIAVP
                     ALTEERRKERVKDVKKIGEEAKVSVRNIRRDMNDQLKKDEKNGDITEDELRSGTEDVQ
                     KATDNSIKEIDQMIADKEKDIMSV"
     gene            8027..8797
                     /locus_tag="O7798_000203"
     CDS             8027..8797
                     /locus_tag="O7798_000203"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499770.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="isoprenyl transferase"
                     /protein_id="HDC2862483.1"
                     /translation="MFKKLINKKNTINNYNEELDSSNIPEHIAIIMDGNGRWAKKRKM
                     PRIKGHYEGMQTIKKITRVASDIGVKYLTLYAFSTENWSRPESEVNYIMNLPVNFLKT
                     FLPELIEKNVKVETIGFTDKLPKSTIEAINNAKEKTANNTGLKLIFAINYGGRAELVH
                     SIKNMFDELHQQGLNSDIIDETYINNHLMTKDYPDPELLIRTSGEQRISNFLIWQVSY
                     SEFIFNQKLWPDFDEDELIKCIKIYQSRQRRFGGLSEE"
     gene            8804..9586
                     /locus_tag="O7798_000204"
     CDS             8804..9586
                     /locus_tag="O7798_000204"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499771.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphatidate cytidylyltransferase"
                     /protein_id="HDC2862484.1"
                     /translation="MKVRTLTAIIALIVFLPILLKGGLVLMIFANILALIALKELLNM
                     NMIKFVSVPGLISAVGLIIIMLPQHAGPWVQVIQLKSLIAMSFIVLSYTVLSKNRFSF
                     MDAAFCLMSVAYVGIGFMFFYETRSEGLHYILYAFLIVWLTDTGAYLFGKMMGKHKLW
                     PVISPNKTIEGFIGGLFCSLIVPLAMLYFVDFNMNVWILLGVTLILSLFGQLGDLVES
                     GFKRHFGVKDSGRILPGHGGILDRFDSFMFVLPLLNILLIQS"
     gene            9798..11084
                     /gene="rseP"
                     /locus_tag="O7798_000205"
     CDS             9798..11084
                     /gene="rseP"
                     /locus_tag="O7798_000205"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000121122.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RIP metalloprotease RseP"
                     /protein_id="HDC2862485.1"
                     /translation="MSYLVTIIAFIIVFGVLVTVHEYGHMFFAKRAGIMCPEFAIGMG
                     PKIFSFRKNETLYTIRLLPVGGYVRMAGDGLEEPPVEPGMNVKIKLNEENEITHIILD
                     DHHKFQQIEAIEVKKCDFKDDLFIEGITAYDNERHHFKIARKSFFVENGSLVQIAPRD
                     RQFAHKKPWPKFLTLFAGPLFNFILALVLFIGLAYYQGTPTSTVEQVADKYPAQQAGL
                     QKGDKIVQIGKYKISEFDDVDKALDKVKDNKTTVKFERDGKTKSVELTPKKTEKKLTK
                     VSSETKYVLGFQPASEHTLFKPIVFGFKSFLIGSTYIFTAVVGMLASIFTGGFSFDML
                     NGPVGIYHNVDSVVKAGIISLIGYTALLSVNLGIMNLIPIPALDGGRILFVIYEAIFR
                     KPVNKKAETTIIAIGAIFMVVIMILVTWNDIRRYFL"
     gene            11104..12807
                     /locus_tag="O7798_000206"
     CDS             11104..12807
                     /locus_tag="O7798_000206"
                     /EC_number="6.1.1.15"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499773.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="proline--tRNA ligase"
                     /protein_id="HDC2862486.1"
                     /translation="MKQSKVFIPTMRDVPSEAEAQSHRLLLKSGLIKQSTSGIYSYLP
                     LATRVLNNITAIVRQEMERIDSVEILMPALQQAELWEESGRWGAYGPELMRLQDRHGR
                     QFALGPTHEELVTSIVRNELKSYKQLPMTLFQIQSKFRDEKRPRFGLLRGREFIMKDA
                     YSFHADEASLDQTYQDMYQAYSRIFERVGINARPVVADSGAIGGSHTHEFMALSAIGE
                     DTIVYSKESDYAANIEKAEVVYEPNHKHTTVQPLEKIETPNVKTAQELADFLGRPVDE
                     IVKTMIFKVDGEYIMVLVRGHHEINDIKLKSYFGTDNIELATQDEIVNLVGANPGSLG
                     PVIDKEIKIYADNFVQDLNNLVVGANEDGYHLINVNVGRDFNVDEYGDFRFILEGEKL
                     SDGSGVAHFAEGIEVGQVFKLGTKYSESMNATFLDNQGKAQSLIMGCYGIGISRTLSA
                     IVEQNHDDNGIVWPKSVTPFDLHLISINPKKDDQRELADALYAEFNTKFDVLYDDRQE
                     RAGVKFNDADLIGLPLRIVVGKRASEGIVEVKERLTGDSEEVHIDDLMTVITNKYDNL
                     K"
     gene            13071..17381
                     /locus_tag="O7798_000207"
     CDS             13071..17381
                     /locus_tag="O7798_000207"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499774.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit alpha"
                     /protein_id="HDC2862487.1"
                     /translation="MTEQQKFKVLADQIKISNQLDAEILNSGELTRIDVSNKNRTWEF
                     HITLPQFLAHEDYLLFINAIEQEFKDIANVTCRFTVTNGTNQDEHAIKYFGHCIDQTA
                     LSPKVKGQLKQKKLIMSGKVLKVMVSNDIERNHFDKACNGSLIKAFRNCGFDIDKIIF
                     ETNDNDQEQNLASLEAHIQEEDEQSARLATEKLEKMKAEKAKQQDNNESAVDKCQIGK
                     PIQIENIKPIESIIEEEFKVAIEGVIFDINLKELKSGRHIVEIKVTDYTDSLVLKMFT
                     RKNKDDLEHFKALSVGKWVRAQGRIEEDTFIRDLVMMMSDIEEIKKATKKDKAEEKRV
                     EFHLHTAMSQMDGIPNIGAYVKQAADWGHPAIAVTDHNVVQAFPDAHAAAEKHGIKMI
                     YGMEGMLVDDGVPIAYKPQDVVLKDATYVVFDVETTGLSNQYDKIIELAAVKVHNGEI
                     IDKFERFSNPHERLSETIINLTHITDDMLVDAPEIEEVLTEFKEWVGDAIFVAHNASF
                     DMGFIDTGYERLGFGPSTNGVIDTLELSRTINTEYGKHGLNFLAKKYGVELTQHHRAI
                     YDTEATAYIFIKMVQQMKELGVLNHNEINKKLSNEDAYKRARPSHVTLIVQNQQGLKN
                     LFKIVSASLVKYFYRTPRIPRSLLDEYREGLLVGTACDEGELFTAVMQKDQSQVEKIA
                     KYYDFIEIQPPALYQDLIDRELIRDTETLHEIYQRLIHAGDTAGIPVIATGNAHYLFE
                     HDGIARKILIASQPGNPLNRSTLPEAHFRTTDEMLNEFHFLGEEKAHEIVVKNTNELA
                     DRIERVVPIKDELYTPRMEGANEEIRELSYANARKLYGEDLPQIVIDRLEKELKSIIG
                     NGFAVIYLISQRLVKKSLDDGYLVGSRGSVGSSFVATMTEITEVNPLPPHYICPNCKT
                     SEFFNDGSVGSGFDLPDKTCETCGAPLIKEGQDIPFETFLGFKGDKVPDIDLNFSGEY
                     QPNAHNYTKVLFGEDKVFRAGTIGTVAEKTAFGYVKGYLNDQGIHKRGAEIDRLVKGC
                     TGVKRTTGQHPGGIIVVPDYMDIYDFTPIQYPADDQNSAWMTTHFDFHSIHDNVLKLD
                     ILGHDDPTMIRMLQDLSGIDPKTIPVDDKEVMQIFSTPESLGVTEDEILCKTGTFGVP
                     EFGTGFVRQMLEDTKPTTFSELVQISGLSHGTDVWLGNAQELIKTGICDLSSVIGCRD
                     DIMVYLMYAGLEPSMAFKIMESVRKGKGLTEEMIETMKENEVPDWYLDSCLKIKYMFP
                     KAHAAAYVLMAVRIAYFKVHHPLYYYASYFTIRASDFDLITMIKDKTSIRNTVKDMYS
                     RYMDLGKKEKDVLTVLEIMNEMAHRGYRMQPISLEKSQAFEFIIEGDTLIPPFISVPG
                     LGENVAKRIVEARDDGPFLSKEDLNKKAGLSQKIIEYLDELGSLPNLPDKAQLSIFDM
                     "
     gene            17671..18138
                     /gene="rimP"
                     /locus_tag="O7798_000208"
     CDS             17671..18138
                     /gene="rimP"
                     /locus_tag="O7798_000208"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499775.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome maturation factor RimP"
                     /protein_id="HDC2862488.1"
                     /translation="MSKITEQVEVIVKPIMEDLNFELVDVEYVKEGRDHFLRISIDKE
                     GGVDLNDCTLASEKISEAMDANDPIPEMYYLDVASPGAERPIKKEQDFQNAITKPVFV
                     SLYVPIEGEKEWLGILQEVNNETIVVQVKIKARTKDIEIPRDKIAKARHAVMI"
     gene            18159..19334
                     /gene="nusA"
                     /locus_tag="O7798_000209"
     CDS             18159..19334
                     /gene="nusA"
                     /locus_tag="O7798_000209"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499776.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcription termination/antitermination
                     protein NusA"
                     /protein_id="HDC2862489.1"
                     /translation="MSSNELLLATEYLEKEKKIPRAVLIDAIEAALITAYKKNYDSAR
                     NVRVELNMDQGTFKVIARKDVVEEVFDDRDEVDLSTALVKNPAYEIGDIYEEDVTPKD
                     FGRVGAQAAKQAVMQRLRDAEREILFEEFIDKEEDILTGIIDRVDHRYVYVNLGRIEA
                     VLSEAERSPNEKYIPNERIKVYVNKVEQTTKGPQIYVSRSHPGLLKRLFEQEVPEIYD
                     GTVIVKSVAREAGDRSKISVFSENNDIDAVGACVGAKGARVEAVVEELGGEKIDIVQW
                     NEDPKVFVKNALSPSQVLEVIVDETNQSTVVVVPDYQLSLAIGKRGQNARLAAKLTGW
                     KIDIKSETDAREAVIYPVVEAEKVTEEDVALEDADTTESTEEVNDVSVETNVEKESE"
     gene            19355..19639
                     /locus_tag="O7798_000210"
     CDS             19355..19639
                     /locus_tag="O7798_000210"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499777.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YlxR family protein"
                     /protein_id="HDC2862490.1"
                     /translation="MKKKKIPMRKCILSNEMHPKKDMIRVVVNKEGEIFADVTGKKQG
                     RGAYVSKDVAMVEKAQQKEILEKYFKASKEQLDPVYKEIIRLIYREEIPK"
     gene            19636..19953
                     /locus_tag="O7798_000211"
     CDS             19636..19953
                     /locus_tag="O7798_000211"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499778.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YlxQ family RNA-binding protein"
                     /protein_id="HDC2862491.1"
                     /translation="MSIDQILNFLGLAMRAGKVKTGESVIVNEIKKGNLKLVIVANDA
                     SDNTAKLITDKCKSYKVPFRKFGNRNELGIALGKGERVNVGITDPGFAKKLLSMIDEY
                     HKE"
     gene            19958..22075
                     /gene="infB"
                     /locus_tag="O7798_000212"
     CDS             19958..22075
                     /gene="infB"
                     /locus_tag="O7798_000212"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499779.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="translation initiation factor IF-2"
                     /protein_id="HDC2862492.1"
                     /translation="MSKQRIYEYAKELNLKSKEIIDELKSMNIEVSNHMQALEDDQIK
                     ALDKKFKKEQKNDNKQSTQNNHQKSNNQNQNKGQQKDNKKNQQQNNKGNKGNKKNNRN
                     NKKNNKNNKPQNQPAAPKEIPSKVTYQEGITVGEFADKLNVESSEIIKKLFLLGIVAN
                     INQSLNQETIELIADDYGVEVEEEVVINEEDLSIYFEDEKDDPEAIERPAVVTIMGHV
                     DHGKTTLLDSIRHTKVTAGEAGGITQHIGAYQIENDGKKITFLDTPGHAAFTTMRARG
                     AQVTDITILVVAADDGVMPQTIEAINHAKEAEVPIIVAVNKIDKPTSNPDRVMQELTE
                     YGLIPEDWGGETIFVPLSALSGDGIDDLLEMIGLVAEVQELKANPKNRAVGTVIEAEL
                     DKSRGPSASLLVQNGTLNVGDAIVVGNTYGRIRAMVNDLGQRIKTAGPSTPVEITGIN
                     DVPQAGDRFVVFSDEKQARRIGESRHEASIIQQRQESKNVSLDNLFEQMKQGEMKDLN
                     VIIKGDVQGSVEALAASLMKIDVEGVNVRIIHTAVGAINESDVTLANASNGIIIGFNV
                     RPDSGAKRAAEAENVDMRLHRVIYNVIEEIESAMKGLLDPEFEEQVIGQAEVRQTFKV
                     SKVGTIAGCYVTEGKITRNAGVRIIRDGIVQYEGELDTLKRFKDDAKEVAKGYECGIT
                     IENYNDLKEGDVIEAFEMVEIKR"
     gene            22461..22811
                     /gene="rbfA"
                     /locus_tag="O7798_000213"
     CDS             22461..22811
                     /gene="rbfA"
                     /locus_tag="O7798_000213"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499780.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosome-binding factor RbfA"
                     /protein_id="HDC2862493.1"
                     /translation="MSSMRAERVGEQMKKELMDIINNKVKDPRVGFITITDVVLTNDL
                     SQAKVFLTVLGNDKEVENTFKALDKAKGFIKSELGSRMRLRIMPELMYEYDQSIEYGN
                     KIERMIQDLHKQDR"
     gene            22980..23897
                     /gene="truB"
                     /locus_tag="O7798_000214"
     CDS             22980..23897
                     /gene="truB"
                     /locus_tag="O7798_000214"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499781.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA pseudouridine(55) synthase TruB"
                     /protein_id="HDC2862494.1"
                     /translation="MYNGILPVYKERGLTSHDVVFKLRKILKTKKIGHTGTLDPEVAG
                     VLPVCIGNATRVSDYVMDMGKAYEATVSIGRSTTTEDQTGDTLETKGVHSADFNKDDI
                     DRLLESFKGIIEQIPPMYSSVKVNGKKLYEYARNNETVERPKRKVNIKDIGRISELDF
                     KENECHFKIRVICGKGTYIRTLATDIGVKLGFPAHMSKLTRIESGGFVLKDSLTLEQI
                     KELHEQDSLQNKLFPLEYGLKGLPSIKIKDSHIKKRILNGQKFNKNEFDNKIKDQIVF
                     IDDDSEKVLAIYMVHPTKESEIKPKKVFN"
     gene            23912..24883
                     /gene="ribF"
                     /locus_tag="O7798_000215"
     CDS             23912..24883
                     /gene="ribF"
                     /locus_tag="O7798_000215"
                     /EC_number="2.7.1.26"
                     /EC_number="2.7.7.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499782.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="riboflavin biosynthesis protein RibF"
                     /protein_id="HDC2862495.1"
                     /translation="MKVIEVTHPIQSKQYITEDVAMAFGFFDGMHKGHDKVFDILNEI
                     AEARSLKKAVMTFDPHPSVVLNPKRKRTTYLTPLSDKIEKISQHDIDYCIVVNFSSRF
                     ANVSVEDFVENYIIKNNVKEVIAGFDFTFGKFGKGNMTVLQEYDAFNTTIVSKQEIEN
                     EKISTTSIRQDLINGELQKANDALGYIYSIKGTVVQGEKRGRTIGFPTANIQPSDDYL
                     LPRKGVYAVSIEIGTENKLYRGVANIGVKPTFHDPNKAEVVIEVNIFDFEDNIYGERV
                     TVNWHHFLRPEIKFDGIDPLVKQMNDDKSRAKYLLAVDFGDEVAYNI"
     gene            24998..25267
                     /gene="rpsO"
                     /locus_tag="O7798_000216"
     CDS             24998..25267
                     /gene="rpsO"
                     /locus_tag="O7798_000216"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011275926.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S15"
                     /protein_id="HDC2862496.1"
                     /translation="MAISQERKNEIIKEYRVHETDTGSPEVQIAVLTAEINAVNEHLR
                     THKKDHHSRRGLLKMVGRRRHLLNYLRSKDIQRYRELIKSLGIRR"
     gene            25637..27733
                     /gene="pnp"
                     /locus_tag="O7798_000217"
     CDS             25637..27733
                     /gene="pnp"
                     /locus_tag="O7798_000217"
                     /EC_number="2.7.7.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499784.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polyribonucleotide nucleotidyltransferase"
                     /protein_id="HDC2862497.1"
                     /translation="MSQEKKVFKTEWAGRSLTIETGQLAKQANGAVLVRYGDTVVLST
                     ATASKEPRDGDFFPLTVNYEEKMYAAGKIPGGFKKREGRPGDDATLTARLIDRPIRPL
                     FPKGYKHDVQIMNMVLSADPDCSPQMAAMIGSSMALSVSDIPFQGPIAGVNVGYIDGK
                     YIINPTVEEKEVSRLDLEVAGHKDAVNMVEAGASEITEQEMLEAIFFGHEEIQRLVDF
                     QQQIVDHIQPVKQEFIPAERDEALVERVKSLTEEKGLKETVLTFDKQQRDENLDNLKE
                     EIVNEFIDEEDPENELLIKEVYAILNELVKEEVRRLIADEKIRPDGRKPDEIRPLDSE
                     VGILPRTHGSGLFTRGQTQALSVLTLGALGDYQLIDGLGPEEEKRFMHHYNFPNFSVG
                     ETGPVRAPGRREIGHGALGERALKYIIPDTADFPYTIRIVSEVLESNGSSSQASICGS
                     TLALMDAGVPIKAPVAGIAMGLVTREDSYTILTDIQGMEDALGDMDFKVAGTKEGITA
                     IQMDIKIDGLTREIIEEALEQARRGRLEIMNHMLQTIDQPRTELSAYAPKVVTMTIKP
                     DKIRDVIGPGGKKINEIIDETGVKLDIEQDGTIFIGAVDQAMINRAREIIEEITREAE
                     VGQTYQATVKRIEKYGAFVGLFPGKDALLHISQISKNRIEKVEDVLKIGDTIEVKITE
                     IDKQGRVNASHRALEE"
     gene            27969..29642
                     /locus_tag="O7798_000218"
     CDS             27969..29642
                     /locus_tag="O7798_000218"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002455407.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease J"
                     /protein_id="HDC2862498.1"
                     /translation="MSLIKKKNKDIRIIPLGGVGEIAKNMYIVEVDDEMFMLDAGLMF
                     PEDEMLGIDIVIPDISYVLENKDKLKGIFLTHGHEHAIGAVSYVLEQLDAPVYGSKLT
                     IALIKENMKARNIDKKVRYYTVNNDSIMRFKNVNISFFNTTHSIPDSLGVCIHTSYGA
                     IVYTGEFKFDQSLHGHYAPDIKRMAEIGEEGVFVLISDSTEAEKPGYNTPENVIEHHM
                     YDAFAKVRGRLIVSCYASNFIRIQQVLNIASKLNRKVSFLGRSLESSFNIARKMGYFD
                     IPKDLLIPITEVDNYPKNEVIIIATGMQGEPVEALSQMAQHKHKIMNIEEGDSVFLAI
                     TASANMEVIIANTLNELVRAGAHIIPNNKKIHASSHGCMEELKMMINIMKPEYFIPVQ
                     GEFKMQIAHAKLAAEAGVAPEKIFLVEKGDVINYNGKDMILNEKVNSGNILIDGIGIG
                     DVGNIVLRDRHLLAEDGIFIAVVTLDPKNRRIAAGPEIQSRGFVYVRESEDLLREAEE
                     KVREIVEAGLQEKRIEWSEIKQNMRDQISKLLFESTKRRPMIIPVISEI"
     gene            29898..32267
                     /locus_tag="O7798_000219"
     CDS             29898..32267
                     /locus_tag="O7798_000219"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017431830.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA translocase FtsK"
                     /protein_id="HDC2862499.1"
                     /translation="MAQAKKKSTAKKKTTSKKRTNSRKKKNDNPIRYVIAILVVVLMV
                     LGVFQLGIIGRLIDSFFNYLFGYSRYLTYILVLLATGFITYSKRIPKTRRTAGSIVLQ
                     IALLFVSQLVFHFNSGIKAEREPVLSYVYQSYQHSHFPNFGGGVLGFYLLELSVPLIS
                     LFGVCIITILLLCSSVILLTNHQHREVAKVALENIKAWFGSFNEKMSERNQEKQLKRE
                     EKARLKEEQKARQNEQPQIKDVSDFTEVPQERDIPIYGHTENESKSQSQPSRKKRVFD
                     AENSSNNIVNHHQADQQEQLTEQTHNSVESENTIEEAGEVTNVSYVVPPLTLLNQPAK
                     QKATSKAEVQRKGQVLENTLKDFGVNAKVTQIKIGPAVTQYEIQPAQGVKVSKIVNLH
                     NDIALALAAKDVRIEAPIPGRSAVGIEVPNEKISLVSLKEVLDEKFPSNNKLEVGLGR
                     DISGDPITVPLNEMPHLLVAGSTGSGKSVCINGIITSILLNAKPHEVKLMLIDPKMVE
                     LNVYNGIPHLLIPVVTNPHKAAQALEKIVAEMERRYDLFQHSSTRNIKGYNELIRKQN
                     QELDEKQPELPYIVVIVDELADLMMVAGKEVENAIQRITQMARAAGIHLIVATQRPSV
                     DVITGIIKNNIPSRIAFAVSSQTDSRTIIGTGGAEKLLGKGDMLYVGNGDSSQTRIQG
                     AFLSDQEVQDVVNYVVEQQQANYVKEMEPDAPVDKSEMKSEDALYDEAYLFVVEQQKA
                     STSLLQRQFRIGYNRASRLMDDLERNQVIGPQKGSKPRQVLIDLNNDEV"
     gene            32272..32985
                     /locus_tag="O7798_000220"
     CDS             32272..32985
                     /locus_tag="O7798_000220"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499787.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GntR family transcriptional regulator"
                     /protein_id="HDC2862500.1"
                     /translation="MSEMNAVYNVKQYILNLIKQNKLEYGDQLPSNLSIARELNVKTD
                     DVYEAIQALITEQVIKDNFEEGTSVKSLPPFFYPLNELISIGQMIKNAGFECGTEYLN
                     FDEQPATMLDANLLSVEEGYPVTIIERLRTADGEPVVYCLDKIAKKELTCTEYQMSNG
                     SILSAIKEQSNHNICYADTEIEAVNYEPRISEVLNASPHEGLILLKITHYNESDEPIL
                     YSLNYMKNSLVQFKITRKI"
     gene            33016..34281
                     /locus_tag="O7798_000221"
     CDS             33016..34281
                     /locus_tag="O7798_000221"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499788.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="insulinase family protein"
                     /protein_id="HDC2862501.1"
                     /translation="MSRQSQPNIHIKVSPTTKFKTTTIVFKFMAPLEYDTITARSLLS
                     KLLVRATKKWPTDKSFNNHLADLYGAYVNSTISKFKDQHVITFSLEIVNERYLRNGES
                     LFNQGLDLLQEIIWNPLIENKAFNDNFVNQEKTLLAKKIEAMVDNKAQYSFLKLLDHM
                     FENEAYKYLSTGQLEQIPHITAETLYHTYQSMINNDQCSVYVVGNVEPESVEKQIREK
                     FALKPFDKHQFQHSTHHLHDEEVDYIVEYDDVDQAKLNMGYRFPTQYGQSGYAAFVVF
                     NMMFGGDPSSVLFNEVREKQSLAYSIHSQIDGKNGYLFVLSGVSSDKYETAKDTIISE
                     FEKIKAGDFTEEKLELAKKVIISHRYESEDRPKSIIEIMHNQILLEQPQSKETFINDI
                     QKVIREDIVSVAEKAFLDTIYVLTKGGDK"
     gene            34281..35567
                     /locus_tag="O7798_000222"
     CDS             34281..35567
                     /locus_tag="O7798_000222"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499789.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="insulinase family protein"
                     /protein_id="HDC2862502.1"
                     /translation="MKERYYELIDERVFEQELENGLRLFIIPKPGFQKTFVTYTTQFG
                     SLDNQFKPLGQDQFVTVPDGVAHFLEHKLFEKEEEDLFTAFAEDNAQANAFTSFDRTS
                     YLFSATDNIENNIKRLLTMVETPYFTKETVDKEKGIIAEEIKMYQEQPGYKLMFNTLR
                     AMYQQHPIRVDIAGSVESIYDITKDDLYLCYETFYHPSNMVLFVVGDVDPEAICRIVK
                     QHEDARNKVNQPKIERGLVDEPEDVKEAFVTESMKIQSPRLMLGFKNKPLQEAPQKYV
                     QRDLEMSLFFELIFGEETDFYQNLLNEGLIDDTFGYQFVLEPTYSFSIVTSATEEPDK
                     LKKLLLDELRDKKGNFQDAEAFELLKKQFIGEFISSLNSPEYIANQYTKLYFEGVSVF
                     DMLDIVENITLDSINETSSLYLNLDQQVDSRLEIKK"
     gene            35567..36271
                     /locus_tag="O7798_000223"
     CDS             35567..36271
                     /locus_tag="O7798_000223"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499790.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /protein_id="HDC2862503.1"
                     /translation="MKALVLGGSGSIGSEIVKQLLTDGFEVYVQYYRTDINELTSKFN
                     DDKVRFIQADLSQTIDIDKTFGDIKSLDCLIYASGQSLYGVLQDMKDHDIDACYQLNV
                     LQLIRLCRYFVDVLRQSANGRIIVISSIWGETGASMETIYSAMKSAQLGFVKALSQEL
                     ALTSVTVNAIAPGFVAGNMASEWQEDELQAMITELPQQRLVLPSEVAHTCAYLYHPNA
                     RSVTGTIQKVNGAWYI"
     gene            36376..37203
                     /locus_tag="O7798_000224"
     CDS             36376..37203
                     /locus_tag="O7798_000224"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499791.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YmfK family protein"
                     /protein_id="HDC2862504.1"
                     /translation="MTVAEKKEWYLEYEIEINRPGLLGDVSSLLGMLGISIVTINGVD
                     QGKRGLLIKTDNLEKVERFEQIARGINEIEITKLKKPELRDRLAVRHGRYIEQDAKDK
                     KTFRFEREDLGLLVDFLAELFKEEGHKLIGIRGMPRVGKTESIVAGSVCAHKRWLFIS
                     STLIKQTVRSSLIKGEYDANHVYIIDGAVTARESNPKHQELVNEVMTLPSIKVVEHPD
                     LFVETSTCTMEDFDYIIELRENENQEIHYEEMKKQTVQSKNNLDFGDPFGGGFGFFE"
     gene            37222..37614
                     /locus_tag="O7798_000225"
     CDS             37222..37614
                     /locus_tag="O7798_000225"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499792.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HDC2862505.1"
                     /translation="MKTVGEALKGRRERLGMTLTELEQRTGIKREMLVHIENNEFDQL
                     PNKNYSEGFIRKYASVVNIEPNQLIQAHQDEIPSNQAEWDEVITVFNNNKDLDYKSKS
                     KEPIQLLVIMGITVLITLLLWIMLVLIF"
     gene            37648..38226
                     /gene="pgsA"
                     /locus_tag="O7798_000226"
     CDS             37648..38226
                     /gene="pgsA"
                     /locus_tag="O7798_000226"
                     /EC_number="2.7.8.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499793.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CDP-diacylglycerol--glycerol-3-phosphate
                     3-phosphatidyltransferase"
                     /protein_id="HDC2862506.1"
                     /translation="MNIPNQITVFRVVLIPVFILFALVDFGFGNVSFLGGYEIRIELL
                     ISGFIFILASLSDFVDGYLARKWNLVTNMGKFLDPLADKLLVASALIVLVQLGLTNSV
                     VAIIIIAREFAVTGLRLLQIEQGFVSAAGQLGKIKTAVTMVAITWLLLGDPLATLIGL
                     SLGQILLYIGVIFTILSGIEYFYKGRDVFKQK"
     gene            38453..39604
                     /locus_tag="O7798_000227"
     CDS             38453..39604
                     /locus_tag="O7798_000227"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499794.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CinA family nicotinamide mononucleotide
                     deamidase-related protein"
                     /protein_id="HDC2862507.1"
                     /translation="MSIAIIAVGSELLLGQIANTNGQFLSKVFNEIGQNVLEHKVIGD
                     NKKRLESSVRHALEKYDTVILTGGLGPTKDDLTKHTVAQIVGKDLVIDEPSLKYIESY
                     FEEQGQEMTPNNKQQALVIEGSTVLTNHHGMAPGMMVNFENKQIILLPGPPKEMQPMV
                     KNELLSHFINHNRIIHSELLRFAGIGESKVETILIDLIDKQTNPTIAPLAGSHEVYIR
                     LTANADSKEQAQSLIQPVKQEILDRIGEYYYGSDDTLIEQAVIKKIHEPFVIYDGITN
                     GALYHRLKEVDLNDVLKGMINHNENFVDINKPIEQQLKDAVQFVNKLFNVSSAIILLE
                     YDGVVHIGYDNNFEFKTEQFKMSKSRNLLKNRSQNYALIRLLNWLRTTN"
     gene            39769..40812
                     /gene="recA"
                     /locus_tag="O7798_000228"
     CDS             39769..40812
                     /gene="recA"
                     /locus_tag="O7798_000228"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499795.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="recombinase RecA"
                     /protein_id="HDC2862508.1"
                     /translation="MDNDRQKALDTVIKNMEKSFGKGAVMKLGDNIGRRVSTTSTGSV
                     TLDNALGVGGYPKGRIIEIYGPESSGKTTVALHAIAEVQSNGGVAAFIDAEHALDPEY
                     AQALGVDIDNLYLSQPDHGEQGLEIAEAFVRSGAVDIVVVDSVAALTPKAEIEGEMGD
                     THVGLQARLMSQALRKLSGAISKSNTTAIFINQIREKVGVMFGNPETTPGGRALKFYS
                     SVRLEVRRAEQLKQGQEIVGNRTKIKVVKNKVAPPFRVAEVDIMYGQGISKEGELIDL
                     GVENDIVDKSGAWYSYNGERMGQGKENVKMYLKENPQIKEEIDRKLREKLGISDGDVE
                     ETEDAPKSLFDEE"
     gene            41166..42725
                     /gene="rny"
                     /locus_tag="O7798_000229"
     CDS             41166..42725
                     /gene="rny"
                     /locus_tag="O7798_000229"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002459258.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease Y"
                     /protein_id="HDC2862509.1"
                     /translation="MNLLNLLLILLGIILGVVGGYVVARNLLLQKQSQARQTAEDIVN
                     QAHKEADNIKKEKLLEAKEENQILREQTEAELRERRSELQRQETRLLQKEENLERKSD
                     LLDKKDEILEQKESKIEEKQQQVDAKESSVQTLIMKHEQELERISGLTQEEAINEQLQ
                     RVEEELSQDIAVLVKEKEKEAKEKVDKTAKELLATAVQRLAADHTSESTVSVVNLPND
                     EMKGRIIGREGRNIRTLETLTGIDLIIDDTPEAVILSGFDPIRREIARTALVNLVSDG
                     RIHPGRIEDMVEKARKEVDDIIREAGEQATFEVNAHNMHPDLVKIVGRLNYRTSYGQN
                     VLKHSIEVAHLASMLAAELGEDETLAKRAGLLHDVGKAIDHEVEGSHVEIGVELAKKY
                     GENETVINAIHSHHGDVEPTSIISILVAAADALSAARPGARKETLENYIRRLERLETL
                     SESYDGVEKAFAIQAGREIRVIVSPEEIDDLKSYRLARDIKNQIEDELQYPGHIKVTV
                     VRETRAVEYAK"
     gene            complement(43022..43237)
                     /locus_tag="O7798_000230"
     CDS             complement(43022..43237)
                     /locus_tag="O7798_000230"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499797.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDC2862510.1"
                     /translation="MSINIDPEKFAELVVMSNPSKFEDAEDIAKESLKLYINAYRLAE
                     RYSTIATNCYDTAEVIKELKKTDLQLK"
     gene            43411..44208
                     /locus_tag="O7798_000231"
     CDS             43411..44208
                     /locus_tag="O7798_000231"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499798.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR00282 family metallophosphoesterase"
                     /protein_id="HDC2862511.1"
                     /translation="MRIMFIGDIVGKIGRDAIETYIPQLKQKYKPTVTIVNAENAAHG
                     KGLTEKIYKQLLRNGVDFMTMGNHTYGQREIYDFIDEAKRLVRPANFPDEAPGIGMRF
                     IQINDIKLAVINLQGRAFMPDIDDPFKKADQLVKEAQEQTPFIFVDFHAETTSEKYAM
                     GWHLDGRASAVVGTHTHIQTADERILPKGTGYITDVGMTGFYDGILGINKTEVIERFI
                     TSLPQRHVVPNEGRSVLSGVVIDLDKEGKTKHIERILINDDHPFSTF"
     gene            44348..46108
                     /locus_tag="O7798_000232"
     CDS             44348..46108
                     /locus_tag="O7798_000232"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499799.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-oxoacid:acceptor oxidoreductase subunit alpha"
                     /protein_id="HDC2862512.1"
                     /translation="MKPQLSWKVGGQQGEGIESTGEIFATAMNRKGYYLYGYRHFSSR
                     IKGGHTNNKIRVSTTPVHAISDDLDILIAFDQETIDVNHHEMREDSIILADAKAKPVK
                     PEGCHAQLIELPFTATAKELGTALMKNMVAIGATSALMNLNTNTFEELITNMFSKKGD
                     KVVEVNIQALNEGYQLMQSRLPEIYGDFELESTDALPHLYMIGNDAIGLGAIAAGSQF
                     MAAYPITPASEVMEYMIANISKVNGAVIQTEDEIAAVTMAIGANYGGVRAFTASAGPG
                     LSLMMEAIGLSGMTETPLVIINTQRGGPSTGLPTKQEQSDLMQMIYGTHGDIPKIVVA
                     PTDAEDAFYLTMEAFNLAEQYQCPVIVLSDLQLSLGKQTVEKLDYNRIEIKRGEIIQS
                     DIEREEDDKGYFKRYALTSDGVSPRPIPGVKGGIHHITGVEHNEEGKPSESASNRQQQ
                     MEKRMRKIEQLLIESPVEANLQHEDADILYIGSISTKGAIQEGSNRLNQQGIKVNTIQ
                     IRQLHPFPTSVIQDAVNKAKKVVVVEHNYQGQLASIIKMNVNIHDKIENYTKYDGTPF
                     LPHEIEEKGKIIATEIKEMV"
     gene            46109..46975
                     /locus_tag="O7798_000233"
     CDS             46109..46975
                     /locus_tag="O7798_000233"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499800.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-oxoacid:ferredoxin oxidoreductase subunit
                     beta"
                     /protein_id="HDC2862513.1"
                     /translation="MATFKDFRNNVKPNWCPGCGDFSVQAAIQKAAANIGLEPEEVAI
                     ITGIGCSGRLSGYINSYGVHSIHGRALPLAQGVKMANKDLTVIASGGDGDGYAIGMGH
                     TIHALRRNMNMTYIVMDNQIYGLTKGQTSPSSAVGFVTKTTPKGNIEKNVAPLELALS
                     SGATFVAQGFSSDIKGLTKLIEDAINHDGFSFVNVFSPCVTYNKINTYDWFKEHLTSV
                     DDIENYDSTDKQLATKTVIEHESLVTGIVYQDKETSSYESQIKELDDTPLAKRDIKIT
                     EDTFNALTEQFI"
     gene            47069..47362
                     /locus_tag="O7798_000234"
     CDS             47069..47362
                     /locus_tag="O7798_000234"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499801.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine-binding protein"
                     /protein_id="HDC2862514.1"
                     /translation="MKDTLMSIQIIPKTPNNDNVIPYVDEAIKIIDESGLHFRVGPLE
                     TTVQGNMNECLILIQSLNERMVELECPSIISQVKFYHVPDGITIETLTEKYDE"
     gene            47496..49040
                     /gene="miaB"
                     /locus_tag="O7798_000235"
     CDS             47496..49040
                     /gene="miaB"
                     /locus_tag="O7798_000235"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499802.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA (N6-isopentenyl
                     adenosine(37)-C2)-methylthiotransferase MiaB"
                     /protein_id="HDC2862515.1"
                     /translation="MNEEQRKASSVDVLAERDKKAEKDYSKYFEHVYQPPNLKEAKKR
                     GKQEVRYNRDFQIDEKYRGMGNERTFLIKTYGCQMNAHDTEVIAGILEALGYQATTDI
                     NTADVILINTCAIRENAENKVFSEIGNLKHLKKERPDILIGVCGCMSQEESVVNKILK
                     SYQNVDMIFGTHNIHHLPEILEEAYLSKAMVVEVWSKEGDVIENLPKVREGNIKAWVN
                     IMYGCDKFCTYCIVPFTRGKERSRRPEDIIDEVRELAREGYKEITLLGQNVNSYGKDL
                     QDIEYDLGDLLQAISKIAIPRVRFTTSHPWDFTDHMIDVISEGGNIVPHIHLPVQSGN
                     NAVLKIMGRKYTRESYLDLVKRIKDRIPNVALTTDIIVGYPNESEEQFEETLTLYDEV
                     GFEHAYTYLYSQRDGTPAAKMKDNVPLNVKKERLQRLNKKVGHYSQIAMSKYEGQTVT
                     VLCEGSSKKDDQVLAGYTDKNKLVNFKAPKEMIGKLVEVRIDEAKQYSLNGSFIKEVE
                     PEMVIQ"
     gene            49041..49406
                     /locus_tag="O7798_000236"
     CDS             49041..49406
                     /locus_tag="O7798_000236"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499803.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RicAFT regulatory complex protein RicA family
                     protein"
                     /protein_id="HDC2862516.1"
                     /translation="MYNKDDVLNQADNIANKIKNLDTIKTYQQIEAQIHQNQTIKTKM
                     DMLKKHQKQAVNFQNYGKQNALEQSEHTIQSIEAEINTLPIVEQFQTSQYEANQLLKM
                     FVSTMETRLNDHNKAKHSD"
     gene            49433..>49872
                     /gene="thiW"
                     /locus_tag="O7798_000237"
     CDS             49433..>49872
                     /gene="thiW"
                     /locus_tag="O7798_000237"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499804.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="energy coupling factor transporter S component
                     ThiW"
                     /protein_id="HDC2862517.1"
                     /translation="MKSRKLAITALLIAINVVLSSIIIIPLGPVKAAPVQHFVNVLSA
                     VIVGPWYGLAQALISSILRVLFGTGTAFAFPGSMIGVLLASMFYIYRKHIFMAAVGEV
                     LGTGVIGSLICIPLAYFLGLQDFFIKPLMITFIVSSAIGSIISY"
BASE COUNT        18333 a         6777 c         9684 g        15078 t
ORIGIN      
        1 aaatacttat cctagtcttt ttaattttgg aattgttacg tatttctgac aatttagaat
       61 tcgcattcaa aaaatatcta aataaataac acgcaataag ttgattgatg taacatgtaa
      121 gagaatgttt taaataaact ttatttaaaa ggcaatgaaa taataaatgg caaggctatt
      181 aataaagact tttagtaatt aatttaaaaa agaggtattc taattaacag gttttccgat
      241 tagttacaat tatttaattc tcaaaagatt tagaattgat tatcaaatta ctgtaagccc
      301 tttgctgtat atgctacaat tcttattgat ggagggtaaa tgtattgaat catattcaag
      361 atgcgttttt aaatacattg aaagttgaac ggaatttttc ggaacacaca ttgaaatcat
      421 atcaagatga cttaattcag tttaatcaat ttttagaaca agaacattta gagttgaata
      481 cttttgaata cagagatgct agaaattatt tgagctattt atattcaaat catttgaaaa
      541 gaacatctgt ttctcgtaaa atctcaacgt taagaacttt ctatgaatat tggatgacgc
      601 ttgatgagaa cattattaat ccatttgttc aattagtaca tccgaaaaaa gaaaaatatc
      661 ttccgcaatt cttttacgaa gaagaaatgg aagcgttatt caaaactgta gaagaggaca
      721 cttcaaaaaa tttacgggat cgagttattc ttgaattgtt gtatgctaca ggcatccgtg
      781 tttcggaatt agtaaatatt aaaaaacaag atatagattt ttacgcgaat ggtgttaccg
      841 tattaggaaa agggagcaaa gagcgctttg taccgtttgg tgcttattgt agacaaagca
      901 tcgaaaatta tttagaacat ttcaaaccaa ttcagtcatg caatcatgat tttcttattg
      961 taaatatgaa gggtgaagca atcactgaac gcggtgtacg atatgtttta aatgatattg
     1021 ttaaacgaac agcaggcgta agtgagattc atccccacaa gctcagacat acatttgcaa
     1081 cgcatttatt gaatcaaggt gcagacctaa gaacagtaca atcgttatta ggtcatgtta
     1141 atttgtcaac aactggtaaa tatacacacg tatctaacca acaattaaga aaagtgtatc
     1201 taaatgcaca tcctcgagcg aaaaaggaga atgaaacatg agtaatacaa cattacatgc
     1261 aacaacaatt tatgctgtaa gacataatgg gaaagcagct atggctggag atgggcaagt
     1321 aacgcttggt caacaagtca tcatgaaaca aacggcaaga aaagtgcgac gtttatatga
     1381 aggtaaagtg ttagctggtt tcgcaggtag tgtagcagat gcgtttacgt tatttgaaaa
     1441 attcgaaaca aaattacaac agtttagtgg taacttagaa agagctgctg ttgaattggc
     1501 acaagaatgg cgaggcgata aacaattacg tcaattagaa gctatgctaa ttgtaatgga
     1561 taaagatgct attttagttg tcagtggaac tggcgaagtt attgctccag atgatgacct
     1621 tatcgctatt ggatcaggag gcaactacgc attaagcgca ggacgtgcat tgaaacgcca
     1681 tgcatcgcat ttgtctgctg aagaaatggc atatgagagc ttgaaagtag cggctgatat
     1741 ttgtgtcttt accaacgata atattgttgt cgaaacacta taataatcag agcacgataa
     1801 ataattacga gcaattaatt ttagttaaaa gacggaggaa tgaaattaat ggatacagct
     1861 ggaataagat taactccaaa agaaatcgta tctaaattaa atgaatacat cgttggacaa
     1921 aatgatgcta aacgtaaagt ggcaattgcc ctacgtaatc gatacagaag aagtttatta
     1981 gatgaggaat caaagcaaga aatttcacct aaaaatattt tgatgattgg accaaccggc
     2041 gttggtaaaa ctgaaattgc aagaagaatg gccaaagttg tcggcgcgcc atttataaaa
     2101 gtagaagcta ctaaatttac tgaggtaggt tatgtaggac gagatgttga aagtatggtt
     2161 agagatcttg ttgatgtttc agtaagatta gtcaaggcgc agaaaaaatc attggtacaa
     2221 gatgaagcaa cagctaaggc caatgaaaaa cttgttaagt tattagttcc aagtatgaaa
     2281 aagaaagcgt ctcaaacgaa taatccttta gagtcacttt tcggaggtgc aattccaaat
     2341 ttcggacaaa ataacgaaga tgaagaagaa ccacctactg aggaaattaa aacaaaacgt
     2401 tctgaaatta agagacagct agaagaaggc aaacttgaaa aagaaaaggt aagaattaaa
     2461 gtcgaacaag atcctggtgc tttaggtatg ctaggtacaa atcaaaatca gcaaatgcaa
     2521 gagatgatga atcaattaat gcctaaaaag aaagttgagc gagaagttgc tgttgagacg
     2581 gcaaggaaaa tcttagctga tagttatgcg gatgaactaa ttgatcaaga aagcgctaac
     2641 caagaagcgc ttgaattagc agaacaaatg ggtatcatct ttatagatga aatcgacaaa
     2701 gttgcgacga ataatcataa tagtggtcaa gatgtctcaa gacaaggtgt tcaaagagat
     2761 attttaccta tacttgaagg tagcgttatt caaaccaaat atggtactgt gaatactgaa
     2821 catatgctgt ttataggtgc tggagctttc catgtatcta agccgagtga cttgatacca
     2881 gaattgcaag gtcgttttcc gattagagtt gaacttgata gtttatcggt agaagatttt
     2941 gtaagaattt tgacagaacc aaaattgtca ttaattaaac aatatgaagc attgcttcaa
     3001 acagaagaag ttactgtaaa ctttaccgat gaagcaatta ctcgcttagc tgagattgct
     3061 tatcaagtaa atcaagatac agacaacatt ggtgcacgtc gacttcatac aattttagaa
     3121 aagatgctag aagatttatc attcgaagca ccaagtatgc cgaatgcagt tgtagatatt
     3181 accccacaat atgttgatga taaattaaaa tcaatttcaa caaataaaga tttaagtgca
     3241 tttattctat aaaaatatac aaaaggagaa aaattcatga gcttattatc taaaacgaga
     3301 gagttaaaca cgttacttca aaaacacaaa ggtattgcgg ttgattttaa agatgtagca
     3361 caaacgatta gtagcgtaac tgtaacaaat gtatttattg tatcgcgtcg aggtaaaatt
     3421 ttaggatcga gtctaaatga attattaaaa agtcaaagaa ttattcaaat gttggaagaa
     3481 agacatattc caagtgaata tacagaacga ttaatggaag ttaaacaaac agaatcaaat
     3541 attgatatcg acaatgtatt aacagtattc ccacctgaaa acagagaatt attcatagat
     3601 agtcgtacaa ctatcttccc aattttaggt ggaggggaaa gattaggtac attagtactt
     3661 ggtcgagtac atgatgattt taatgaaaat gatttggtac taggtgaata tgctgctaca
     3721 gttattggta tggaaatctt acgtgagaag catagtgaag tagaaaaaga agcgcgcgat
     3781 aaagctgcta ttacaatggc aattaattca ttatcttatt ctgaaaaaga agcgattgaa
     3841 catatctttg aagaacttgg cggtacggaa ggcctattaa tcgcatcaaa agttgcagat
     3901 agagttggta ttactagatc tgtaattgta aatgcactac gtaaattaga aagtgctggt
     3961 gtaattgaat cacgttcttt aggaatgaaa ggtactttca ttaaagttaa aaaagaaaaa
     4021 ttcttagatg aattagaaaa aagtaaataa gtcgatgagt ctgggacata attcaatgtc
     4081 ctagtcgtga cgatgttatc ttggcggtag tcaatgaaat gactttgatg attatgttga
     4141 agtcatttct ttatttttgt ctaattttca atcaaattga tatttcacat taacttgata
     4201 gaattacctt taaatttatg gaaaaatgct tgaaaaacat ttgctttaga cacggcatta
     4261 tgttatattt attttcggct ataaagccaa tacacacata tcaaacgtga ttgtgtaaag
     4321 ggtgcaatat ttatatattg tctttacaat agtttgctat ggaggtaatt aaccaatagg
     4381 aggaatttat aatggcagta atttcaatga aacaattact agaagcgggt gttcacttcg
     4441 gtcaccaaac acgtcgttgg aacccaaaaa tgaaaaaata tatcttcact gagagaaatg
     4501 gtatttatat catcgactta caaaaaacag tgaaaaaagt agacgaggca tacaacttct
     4561 tgaaacaagt ttcagaagat ggtggacaag tcttatttgt aggaactaaa aaacaagcac
     4621 aagaatcagt taaatctgaa gcagaacgtg ctggtcaatt ctacattaac caaagatggt
     4681 taggtggatt attaactaac tataaaacga tctcaaaacg aatcaaacgt atttctgaaa
     4741 ttgaaaaaat ggaagaagat ggtttattcg aagtattacc taaaaaagaa gtagtagaac
     4801 ttaaaaaaga atacgaccgt ttaatcaaat tcttaggcgg aattcgtgat atgaaatcaa
     4861 tgcctcaagc attattcgta gttgacccac gtaaagagcg taatgcaatt gctgaagctc
     4921 gtaaattaaa tattcctatc gtaggtatcg ttgacactaa ctgtgatcct gacgaaattg
     4981 actacgttat cccagcaaac gacgatgcta tccgtgcggt taaattatta actgctaaaa
     5041 tggcagatgc aatcttagaa ggtcaacaag gcgtttctaa tgaagaagta gctgcagaac
     5101 aaaacatcga tttagatgaa aaagaaaaat cagaagaaac agaagcaact gaagaataat
     5161 caactgttga atctgactta gatatagttt aaatgggtga taagatatta atgcttatca
     5221 ccttttttaa aaagaaaatc gaggcaaatt acaaatattc aattagagta ttggcaatct
     5281 tgcctataat aatgctaaaa tcataatata taaaatgata acttattgga ggaataatga
     5341 atggcaacta tttcagcaaa acttgttaaa gaattacgtg aaaaaactgg cgcgggtatg
     5401 atggattgta aaaaagcgct aactgaaact gatggtgaca tcgataaagc gattgactac
     5461 ctacgtgaaa aaggtattgc taaagcagct aaaaaagcag accgtattgc ggctgaaggt
     5521 ttagtacatg tagaaactaa aggtaacgac gcagttatcg ttgaaatcaa ctctgaaaca
     5581 gactttgttg ctcgtaacga aggtttccaa gagttagtta aagaaatcgc taatcaagta
     5641 ttagatacaa aagctgaaac tgttgaagct ttaatggaaa caactttacc aaatggtaaa
     5701 tcagttgatg aaagaattaa agaagcaatt tcaacaatcg gtgaaaaatt aagtgttcgt
     5761 cgttttgcta tcagaactaa aactgataac gatgctttcg gcgcttactt acacatgggt
     5821 ggacgcattg gtgtattaac agttgttgaa ggttcaactg acgaagaagc agcaagagac
     5881 gttgctatgc atatcgctgc aatcaaccct aaatatgttt cttctgaaca agttagcgaa
     5941 gaagaaatca accacgaaag agaagtttta aaacaacaag cattaaatga aggtaaacca
     6001 gaaaacatcg ttgaaaaaat ggtggaagga cgtttacgta aatacttaca agaaatttgt
     6061 gctgtagatc aagacttcgt taaaaaccct gatgtaacag ttgaagcttt cttaaaaaca
     6121 aaaggtggaa aacttgttga cttcgtacgc tatgaagtag gcgaaggtat ggaaaaacgc
     6181 gaagaaaact ttgcggatga agttaaagga caaatgaaat aatctgtcat aaagtaaaac
     6241 aaggaagaag acacctttaa tgttgcttta ttaaaatgta aatcattcta ataaaacgac
     6301 aactgtgtct tctttacttg tatatgttac atatattcac gatagagagg ataagaaaat
     6361 ggctcaaatt tctaaatata aacgtgtagt tttgaaacta agtggtgaag cgttagctgg
     6421 agaaaaagga tttggcataa atccagtaat tattaaaagt gttgctgagc aagtggctga
     6481 agttgctaaa atggactgtg aaatcgcagt aatcgttggt ggcggaaaca tttggagagg
     6541 taaaacaggt agtgacttag gtatggaccg tggaactgct gattacatgg gtatgcttgc
     6601 aactgtaatg aatgccttag cattacaaga tagtttagaa caattggatt gtgatacacg
     6661 agtattaaca tctattgaaa tgaagcaagt ggctgaacct tatattcgtc gtcgtgcaat
     6721 tagacactta gaaaagaaac gcgtagttat ttttgctgca ggtattggaa acccatactt
     6781 ctctacagat actacagcgg cattacgtgc tgcagaagtt gaagcagatg ttattttaat
     6841 gggcaaaaat aatgtagatg gtgtatattc tgcagatcct aaagtaaaca aagatgcggt
     6901 aaaatatgaa catttaacgc atattcaaat gcttcaagaa ggtttacaag taatggattc
     6961 aacagcatcc tcattctgta tggataataa cattccgtta actgttttct ctattatgga
     7021 agaaggaaat attaaacgtg ctgttatggg tgaaaagata ggtacgttaa ttacaaaata
     7081 aatttagagg tgtaaaataa tgagtgacat tattaatgaa actaaatcaa gaatgcaaaa
     7141 atcaatcgaa agcttatcac gtgaattagc taacatcagt gcaggaagag ctaattcaaa
     7201 tttattaaac ggcgtaacag ttgattacta tggtgcacca acacctgtac aacaattagc
     7261 aagcatcaat gttccagaag cacgtttact tgttatttct ccatacgaca aaacttctgt
     7321 agctgacatc gaaaaagcga taatagcagc taacttaggt gttaacccaa caagtgatgg
     7381 tgaagtgata cgtattgctg tacctgcctt aacagaagaa cgtagaaaag agcgcgttaa
     7441 agatgttaag aaaattggtg aagaagctaa agtatctgtt cgaaatattc gtcgtgatat
     7501 gaatgatcag ttgaaaaaag atgaaaaaaa tggcgacatt actgaagatg agttgagaag
     7561 tggtactgaa gatgttcaga aagcaacaga caattcaata aaagaaattg atcaaatgat
     7621 tgctgataaa gaaaaagata ttatgtcagt ataaaactaa tatacaatga catattaaaa
     7681 tgccagtatt aaacgataat gtaacattta aaatgggcat gtttaattaa atcaaagatg
     7741 catgtgataa tttaaattca caatgagcat aaaaatggtg tttaaacaag ttaattaaac
     7801 atatacttta taaataatag gcattaggta tattgctata ataaagttat gtaattttta
     7861 acctcagtat gtatgtcaca tttctggtgt aaactgtacc gagtcagact ttggtacagt
     7921 ttttttattt gcttattcaa tgcattaaat gagtatgata aaatgataat gattgtttag
     7981 taacttatac tatatgacag agatgatcag gctcggagga aagaccatgt ttaaaaagct
     8041 aataaataaa aagaacacta taaataatta taatgaagaa ttagactcgt ctaatatacc
     8101 tgaacatatc gctattatta tggatggtaa tgggcgatgg gctaagaagc gaaaaatgcc
     8161 tagaattaaa ggtcattacg aaggtatgca aacaataaaa aaaattacta gggtagctag
     8221 tgatattggt gttaagtact taactttata cgccttttcc actgaaaatt ggtcaagacc
     8281 tgaaagtgaa gtaaattata ttatgaattt gcctgtcaat ttcttaaaga cattcttacc
     8341 ggaactaatt gaaaaaaatg tcaaagttga aacaattgga tttactgata agttgccaaa
     8401 atcaacgata gaagcaatta ataatgctaa agaaaagaca gctaataata ccggcttaaa
     8461 attaatattt gcaattaatt atggtggcag agcagaactt gttcatagta ttaaaaatat
     8521 gtttgacgag cttcatcaac aaggtttaaa tagtgatatc atagatgaaa catatataaa
     8581 caatcattta atgacaaaag actatcctga tccagagttg ttaattcgta cttcaggaga
     8641 acaaagaata agtaatttct tgatttggca agtttcgtat agtgaattta tctttaatca
     8701 aaaattatgg cctgactttg acgaagatga attaattaaa tgtataaaaa tttatcagtc
     8761 acgtcaaaga cgctttggcg gattgagtga ggagtagtat agtatgaaag ttagaacgct
     8821 gacagctatt attgccttaa tcgtattctt gcctatcttg ttaaaaggcg gccttgtgtt
     8881 aatgatattt gctaatatat tagcattgat tgcattaaaa gaattgttga atatgaatat
     8941 gattaaattt gtttcagttc ctggtttaat tagtgcagtt ggtcttatca tcattatgtt
     9001 gccacaacat gcagggccat gggtacaagt aattcaatta aaaagtttaa ttgcaatgag
     9061 ctttattgta ttaagttata ctgtcttatc taaaaacaga tttagtttta tggatgctgc
     9121 attttgctta atgtctgtgg cttatgtagg cattggtttt atgttctttt atgaaacgag
     9181 atcagaagga ttacattaca tattatatgc ctttttaatt gtttggctta cagatacagg
     9241 ggcttacttg tttggtaaaa tgatgggtaa acataagctt tggccagtaa taagtccgaa
     9301 taaaacaatc gaaggattca taggtggctt gttctgtagt ttgatagtac cacttgcaat
     9361 gttatatttt gtagatttca atatgaatgt atggatatta cttggagtga cattgatttt
     9421 aagtttattt ggtcaattag gtgatttagt ggaatcagga tttaagcgtc atttcggcgt
     9481 taaagactca ggtcgaatac tacctggaca cggtggtatt ttagaccgat ttgacagctt
     9541 tatgtttgtg ttaccattat taaatatttt attaatacaa tcttaatgct gagaacaaat
     9601 caataaacgt aaagaggagt tgctgagata atttaatgaa tctcagaact ccttttgaaa
     9661 attatacgca atattaactt tgaaaattag acgttatatt ttgtgatttg tcagtatcat
     9721 attataatga cttatgttac gtatacagca atcattttta aaataaaaga aatttataaa
     9781 caatcgaggt gtagcgagtg agctatttag ttacaataat tgcatttatt attgtttttg
     9841 gtgtactagt aactgttcat gaatatggcc atatgttttt tgcgaaaaga gcaggcatta
     9901 tgtgtccaga atttgcgatc ggtatggggc caaaaatttt tagttttaga aaaaatgaaa
     9961 cactttacac tattaggtta ttgcctgttg gtggatatgt tcgtatggca ggagatggct
    10021 tagaagagcc accagtcgag cccggtatga acgttaaaat taaacttaat gaagaaaatg
    10081 aaataacaca tatcatatta gatgatcatc ataagtttca acaaattgaa gcgatcgaag
    10141 ttaaaaaatg tgattttaag gatgacttat tcatagaagg tatcactgct tatgataatg
    10201 aaagacatca ttttaaaatt gctagaaagt ctttctttgt tgaaaatggt agcttagttc
    10261 aaattgctcc gagagacaga caatttgcac ataaaaagcc atggccgaaa tttttaacat
    10321 tatttgcggg accgttattt aactttatat tagctttagt cctatttatt ggtcttgcat
    10381 attatcaagg cacgcctacg tctactgtag aacaagtcgc agataagtat ccagctcaac
    10441 aagcaggatt acaaaaaggt gataagatcg tccaaattgg caaatataaa atatctgaat
    10501 ttgatgatgt tgataaggcg ttagataaag ttaaagataa taagacgact gttaaatttg
    10561 aacgtgatgg taaaacaaag tcagttgaat taacacctaa aaagactgaa aaaaaactga
    10621 ctaaagtaag ttcagagacg aagtatgttc tcggattcca accagcgagt gaacatacac
    10681 tttttaaacc aattgtattc ggatttaaaa gctttttaat cggtagtact tatattttta
    10741 cagctgtagt aggtatgttg gctagtatat ttacgggcgg attctcattt gatatgttaa
    10801 atggtccggt tggtatttat cataacgtcg actcagttgt taaagcgggt atcattagct
    10861 taattggtta cactgcgtta ttaagtgtaa acttaggtat tatgaattta attcctattc
    10921 ctgcactaga cggtggtcgt attttatttg ttatatatga agcgattttc agaaaaccag
    10981 ttaataaaaa agcggaaaca acgattattg ctattggtgc cattttcatg gtcgttataa
    11041 tgatattagt aacgtggaat gatattcgac gatatttctt ataatttagg aggataaata
    11101 attatgaagc aatccaaagt ttttatacca acgatgcgtg acgtgccatc agaagcagaa
    11161 gcacaaagtc atcgtttatt attgaaatcg ggtttgataa aacaaagtac aagtgggatt
    11221 tatagttatt taccgctagc aacacgtgtg ttaaataata ttactgcaat tgtgcgacaa
    11281 gaaatggaac gtatcgattc tgttgaaatt ttaatgccag cgttacaaca agctgaatta
    11341 tgggaagaat caggacgttg gggtgcatat ggcccagaat taatgcgttt acaagataga
    11401 catggaagac aatttgcatt aggtccaaca catgaagaat tagttacatc aatagtaaga
    11461 aatgaattga aatcatacaa acaattaccg atgacattat tccaaattca atctaaattc
    11521 cgtgatgaaa agagaccacg ttttggttta cttcgtgggc gtgaatttat tatgaaagat
    11581 gcatattcat tccatgctga cgaggcatca ttagatcaaa cgtatcaaga tatgtatcaa
    11641 gcgtatagcc gtatttttga gagagttggc attaacgcaa gaccagtagt tgcagattca
    11701 ggtgctatag gcggtagcca tacacatgaa tttatggcat taagtgctat cggtgaggat
    11761 acaatcgttt acagtaaaga aagtgattat gctgctaaca tcgaaaaagc agaagtcgtt
    11821 tacgaaccaa atcataagca tactactgtg caacctttag aaaaaattga aacaccaaat
    11881 gttaagactg cgcaagaatt ggcagacttc ttaggtagac cagtagatga aatcgttaaa
    11941 acgatgattt tcaaagttga tggcgaatat attatggttt tagtgcgtgg ccatcatgaa
    12001 attaatgaca ttaaattaaa atcttatttc ggcacagata atattgaatt agcaacacaa
    12061 gacgaaattg ttaatttagt tggtgcaaat cctggttcac taggtcctgt aattgataaa
    12121 gaaatcaaaa tttatgcaga taattttgtg caagatttaa ataatttagt tgtcggtgct
    12181 aacgaagatg gttatcactt aattaatgta aatgtaggta gagacttcaa cgttgatgaa
    12241 tatggcgatt tccgttttat tttagaaggc gaaaagttaa gtgatggttc aggcgttgca
    12301 cattttgctg aaggtattga agttggtcaa gtattcaaat tgggtactaa gtattcagaa
    12361 tcaatgaatg ctacattctt agataaccaa ggaaaagctc aatctttaat tatgggttgt
    12421 tacggaattg gaatttctag aacgctaagt gcgattgttg aacaaaatca cgatgataat
    12481 ggaattgttt ggcctaaatc agttactccg tttgatttac atttaatttc tattaatcct
    12541 aagaaagatg atcaacgaga actagcagat gcactatatg ctgaatttaa tactaaattt
    12601 gatgtgttgt acgatgatcg tcaggaacgt gcaggtgtta aatttaatga tgccgattta
    12661 attggtttac cactgcgaat tgttgttggt aaacgtgcat cggaaggtat tgtagaagtt
    12721 aaagaacgtt taacaggtga tagcgaagaa gttcacattg atgacttaat gactgtcatt
    12781 acaaataaat atgataactt aaaataatta agatcgaatg aattataaga gtaggaaaaa
    12841 gctgaaagaa atctgatgct tatgtcctgc tcttattatt tttgatataa tgattattcg
    12901 atgaaaaatg actgaagaca tagtataatt aaagataaat ttgttttaac aatataatga
    12961 ttagccaaat ataaagcatt taattttcta tcattactat gctcacataa tctaaatatt
    13021 gttcgaacac gtaaaagtaa tttctattta aggtggtaat tgtcttggca atgacagagc
    13081 aacaaaaatt taaagtgctt gctgatcaaa ttaaaatttc aaatcaatta gatgctgaaa
    13141 ttttaaattc aggtgaactg acacgtatag atgtttctaa caaaaacaga acatgggaat
    13201 ttcatattac attaccacaa ttcttagctc atgaagatta tttattattt ataaatgcaa
    13261 tagagcaaga gtttaaagat atcgccaacg ttacatgtcg ttttacggta acaaatggca
    13321 cgaatcaaga tgaacatgca attaaatact ttgggcactg tattgaccaa acagctttat
    13381 ctccaaaagt taaaggtcaa ttgaaacaga aaaagcttat tatgtctgga aaagtattaa
    13441 aagtaatggt atcaaatgac attgaacgta atcattttga taaggcatgt aatggaagtc
    13501 ttatcaaagc gtttagaaat tgtggttttg atatcgataa aatcatattc gaaacaaatg
    13561 ataatgatca agaacaaaac ttagcttctt tagaagcaca tattcaagaa gaagacgaac
    13621 aaagtgcacg attggcaaca gagaaacttg aaaaaatgaa agctgaaaaa gcgaaacaac
    13681 aagataacaa cgaaagtgct gtcgataagt gtcaaattgg taagccgatt caaattgaaa
    13741 atattaaacc aattgaatct attattgagg aagagtttaa agttgcaata gagggtgtca
    13801 tttttgatat aaacttaaaa gaacttaaaa gtggtcgcca tatcgtagaa attaaagtga
    13861 ctgactatac ggactcttta gttttaaaaa tgtttactcg taaaaacaaa gatgatttag
    13921 aacattttaa agcgctaagt gttggtaaat gggttagggc tcaaggtcgt attgaagaag
    13981 atacatttat tagagattta gttatgatga tgtctgatat tgaagagatt aaaaaagcga
    14041 caaaaaaaga taaggctgaa gaaaagcgtg tagaattcca cttgcatact gcaatgagcc
    14101 aaatggatgg tatacccaat attggtgcgt atgttaaaca ggcagcagac tggggacatc
    14161 cagccattgc ggttacagac cataatgttg tgcaagcatt tccagatgct cacgcagcag
    14221 cggaaaaaca tggcattaaa atgatatacg gtatggaagg tatgttagtt gatgatggtg
    14281 ttccgattgc atacaaacca caagatgtcg tattaaaaga tgctacttat gttgtgttcg
    14341 acgttgagac aactggttta tcaaatcagt atgataaaat catcgagctt gcagctgtga
    14401 aagttcataa cggtgaaatc atcgataagt ttgaaaggtt tagtaatccg catgaacgat
    14461 tatcggaaac gattatcaat ttgacgcata ttactgatga tatgttagta gatgcccctg
    14521 agattgaaga agtacttaca gagtttaaag aatgggttgg cgatgcgata ttcgtagcgc
    14581 ataatgcttc gtttgatatg ggcttcatcg atacgggata tgaacgtctt gggtttggac
    14641 catcaacgaa tggtgttatc gatactttag aattatctcg tacgattaat actgaatatg
    14701 gtaaacatgg tttgaatttc ttggctaaaa aatatggcgt agaattaacg caacatcacc
    14761 gtgccattta tgatacagaa gcaacagctt acattttcat aaaaatggtt caacaaatga
    14821 aagaattagg cgtattaaat cataacgaaa tcaacaaaaa actcagtaat gaagatgcat
    14881 ataaacgtgc aagacctagt catgtcacat taattgtaca aaaccaacaa ggtcttaaaa
    14941 atctatttaa aattgtaagt gcatcattgg tgaagtattt ctaccgtaca cctcgaattc
    15001 cacgttcatt gttagatgaa tatcgtgagg gattattggt aggtacagcg tgtgatgaag
    15061 gtgaattatt tacggcagtt atgcagaagg accagagtca agttgaaaaa attgccaaat
    15121 attatgattt tattgaaatt caaccaccgg cactttatca agatttaatt gatagagagc
    15181 ttattagaga tactgaaaca ttacatgaaa tttatcaacg tttaatacat gcaggtgaca
    15241 cagcgggtat acctgttatt gcgacaggaa atgcacacta tttgtttgaa catgatggta
    15301 tcgcacgtaa aattttaata gcatcacaac ccggcaatcc acttaatcgc tcaactttac
    15361 cggaagcaca ttttagaact acagatgaaa tgttaaacga gtttcatttt ttaggtgaag
    15421 aaaaagcgca tgaaattgtt gtgaaaaata caaacgaatt agcagatcga attgaacgtg
    15481 ttgttcctat taaagatgaa ttatacacac cgcgtatgga aggtgctaac gaagaaatta
    15541 gagaactaag ttatgcaaat gcgcgtaaac tgtatggtga agacctgcct caaatcgtaa
    15601 ttgatcgatt agaaaaagaa ttaaaaagta ttatcggtaa tggatttgcg gtaatttact
    15661 taatttcgca acgtttagtt aaaaaatcat tagatgatgg atacttagtt ggttcccgtg
    15721 gttcagtagg ttctagtttt gtagcgacaa tgactgagat tactgaagta aacccgttac
    15781 cgccacacta tatttgtccg aactgtaaaa cgagtgaatt tttcaatgat ggttcagtag
    15841 gatcaggatt tgatttacct gataagacgt gtgaaacttg tggagcgcca cttattaaag
    15901 aaggacaaga tattccgttt gaaacatttt taggatttaa gggagataaa gttcctgata
    15961 tcgacttaaa ctttagtggt gaatatcaac cgaatgccca taactacaca aaagtattat
    16021 ttggtgagga taaagtattc cgtgcaggta caattggtac tgttgctgaa aagactgctt
    16081 ttggttatgt taaaggttat ttgaatgatc aaggtatcca caaaagaggt gctgaaatag
    16141 atcgactcgt taaaggatgt acaggtgtta aacgtacaac tggacagcat ccagggggta
    16201 ttattgtagt acctgattac atggatattt atgattttac gccgatacaa tatcctgccg
    16261 atgatcaaaa ttcagcatgg atgacgacac attttgattt ccattctatt catgataatg
    16321 tattaaaact tgatatactt ggacacgatg atccaacaat gattcgtatg cttcaagatt
    16381 tatcaggaat tgatccaaaa acaatacctg tagatgataa agaagttatg cagatattta
    16441 gtacacctga aagtttgggt gttactgaag atgaaatttt atgtaaaaca ggtacatttg
    16501 gggtaccaga attcggtaca ggattcgtgc gtcaaatgtt agaagataca aagccaacaa
    16561 cattttctga attagttcaa atctcaggat tatctcatgg tacagatgtg tggttaggca
    16621 atgctcaaga attaattaaa accggtatat gtgatttatc aagtgtaatt ggttgtcgtg
    16681 atgatatcat ggtttattta atgtatgctg gtttagaacc atcaatggct tttaaaataa
    16741 tggagtcagt acgtaaaggt aaaggtttaa ctgaagaaat gattgaaacg atgaaagaaa
    16801 atgaagtgcc agattggtat ttagattcat gtcttaaaat taagtacatg ttccctaaag
    16861 cccatgcagc agcatacgtt ttaatggcag tacgtatcgc atatttcaaa gtacatcatc
    16921 cactttatta ctatgcatct tactttacaa ttcgtgcgtc agactttgat ttaatcacga
    16981 tgattaaaga taaaacaagc attcgaaata ctgtaaaaga catgtattct cgctatatgg
    17041 atctaggtaa aaaagaaaaa gacgtattaa cagtcttgga aattatgaat gaaatggcgc
    17101 atcgaggtta tcgaatgcaa ccgattagtt tagaaaagag tcaggcgttc gaatttatca
    17161 ttgaaggcga tacacttatt ccgccgttca tatcagtgcc tgggcttggc gaaaacgttg
    17221 cgaaacgaat tgttgaagct cgtgacgatg gcccattttt atcaaaagaa gatttaaaca
    17281 aaaaagctgg attatctcag aaaattattg agtatttaga tgagttaggc tcattaccga
    17341 atttaccaga taaagctcaa ctttcgatat ttgatatgta aaatgaaata atcaaggtat
    17401 ttatttaatg cgtatggcgt agtcaaagaa atacaaaatt gttgctggac acaaaattat
    17461 gcccgtattt cttttcaatg tcttacgagt ctattcaaat gtaatggtga aataaaggaa
    17521 caaactttta caagaatctc tgattaatag tgaagtcatt tgtttcaagc ataaacttat
    17581 gctataatta agttgcttaa aaattagtga actcaggcag aagagtggga gattcccgct
    17641 cttttctatt tgccaaaaag ggaggcctgt atgagtaaaa ttacagaaca agtagaagtg
    17701 attgttaaac caattatgga agacttgaat tttgaacttg tagacgttga atatgtcaaa
    17761 gagggtagag atcattttct tagaatctct attgataaag aaggtggcgt agatttaaat
    17821 gattgtacgc tagcttctga aaaaataagt gaagctatgg atgcaaatga tcctattcct
    17881 gaaatgtatt atttagacgt agcgtcacct ggtgcagaac gtccaattaa aaaagaacaa
    17941 gatttccaaa atgcaataac gaaacctgta tttgtttctt tatatgtacc aattgaaggt
    18001 gaaaaggaat ggttaggcat tttacaagaa gtcaataatg aaacaattgt agtacaagtt
    18061 aaaatcaaag caagaacgaa agatatagag ataccgagag acaaaatagc aaaagcacgt
    18121 cacgcagtta tgatttaacg tgatgaggag gaaaaaacgt gtcaagtaat gaattattat
    18181 tagctactga gtatttagaa aaagaaaaga agattcctag agcagtatta attgatgcta
    18241 ttgaagcagc tttaattact gcatacaaaa agaattatga tagtgcaaga aatgtccgtg
    18301 tggaattaaa tatggatcaa ggtactttca aagttatcgc tcgtaaagat gttgttgaag
    18361 aagtatttga cgacagagat gaagtggatt taagtacagc gcttgttaaa aaccctgcat
    18421 atgaaattgg tgatatatac gaagaagatg taacacctaa agattttggt cgtgtaggtg
    18481 ctcaagcagc gaaacaagca gtaatgcaac gtcttcgtga tgctgaacgt gaaattttat
    18541 ttgaagaatt tatagacaaa gaagaagaca tacttactgg aattattgac cgtgttgacc
    18601 atcgttatgt atatgtgaat ttaggtcgta tcgaagctgt tttatctgaa gcagaaagaa
    18661 gtcctaacga aaaatatatt cctaacgaac gtatcaaagt atatgttaac aaagtggaac
    18721 aaacgacaaa aggtcctcaa atctatgttt ctcgtagcca tccaggttta ttaaaacgtt
    18781 tatttgaaca agaagttcca gaaatttacg atggtactgt aattgttaaa tcagtagcac
    18841 gtgaagctgg cgatcgctct aaaattagtg tcttctctga aaacaatgat atagatgctg
    18901 ttggtgcatg tgttggtgct aaaggcgcac gtgttgaagc tgttgttgaa gagctaggtg
    18961 gtgaaaaaat cgacatcgtt caatggaatg aagatccaaa agtatttgta aaaaatgctt
    19021 taagcccttc tcaagtttta gaagttattg ttgatgaaac aaatcaatct acagtagttg
    19081 ttgttcctga ttatcaattg tcattagcga ttggtaaaag aggacaaaac gcacgtctag
    19141 ctgctaaatt aaccggctgg aaaattgata ttaaatcaga aacagatgcg cgtgaagcgg
    19201 ttatctatcc agtagttgaa gctgaaaaag taactgaaga agatgttgct ttagaagatg
    19261 ctgacacaac agaatcaacc gaagaggtaa atgatgtttc agttgaaaca aatgtagaga
    19321 aagaatctga ataataggtt ggagtgaagt atctatgaaa aagaaaaaaa ttccgatgcg
    19381 aaaatgtatt ctttcaaatg aaatgcatcc caaaaaagat atgattcgtg ttgttgttaa
    19441 taaagaaggc gaaatctttg cggatgttac tggaaagaaa caaggccgtg gcgcatatgt
    19501 ttctaaagat gttgctatgg ttgaaaaagc acaacaaaaa gaaattttag aaaaatattt
    19561 taaagcatct aaagagcaat tggatcctgt ttacaaagaa attattagat taatttatag
    19621 agaagagatc ccaaaatgag tatagatcaa atattaaact ttttaggatt agcaatgaga
    19681 gctggtaaag taaaaacagg tgaatcagtc attgttaatg agattaaaaa aggaaatttg
    19741 aagctcgtta ttgttgcaaa tgatgcgtct gataatacag ctaaattaat tacagataaa
    19801 tgtaagagtt acaaagttcc attcagaaag tttggaaatc gaaatgaatt gggaatagca
    19861 cttggaaaag gtgagcgtgt taatgtaggg attactgacc caggctttgc taaaaagttg
    19921 ctatcaatga tagatgaata tcataaggag tgattatatg agtaaacaaa gaatttacga
    19981 atatgcgaaa gaattaaatc taaagagtaa agagattata gatgagttaa aaagcatgaa
    20041 tattgaggtt tcaaatcata tgcaagcttt ggaagatgac caaattaaag cattagataa
    20101 aaagttcaaa aaagaacaaa agaacgacaa taaacaaagc actcaaaata atcaccaaaa
    20161 atcaaacaat caaaaccaaa ataaagggca acaaaaagat aacaaaaaga atcaacaaca
    20221 aaataataaa ggcaacaaag gcaataaaaa gaataataga aataataaga aaaataacaa
    20281 gaataataaa ccacaaaatc aaccagctgc tccaaaagaa ataccatcaa aagtgacata
    20341 tcaagaaggt attacagtag gcgaatttgc ggataaatta aatgttgaat catcagaaat
    20401 tatcaaaaaa ttattcttac ttggtattgt tgctaatatc aatcaatcat taaatcaaga
    20461 aacaatcgaa ttaattgccg atgattatgg cgttgaggtt gaagaagaag ttgtgattaa
    20521 tgaagaagac ttatcaatct atttcgaaga cgaaaaagat gatccagagg caattgagag
    20581 accagcagtt gtaacaatta tgggacatgt tgaccatggt aaaacgactt tattagattc
    20641 aattcgtcat acaaaagtta cagcaggtga agcaggcgga atcactcaac atattggtgc
    20701 atatcaaatt gaaaacgatg gcaaaaaaat cactttctta gatacaccgg gacatgctgc
    20761 atttacaacg atgcgtgcgc gtggtgcaca agtaacagat attactattt tagtagtagc
    20821 agctgacgat ggtgttatgc cacaaacaat tgaagcaatt aaccatgcta aagaagcaga
    20881 agtaccaatt attgttgcag taaataaaat tgataaacca acttcaaatc ctgatcgagt
    20941 tatgcaagaa ttaactgaat atggtttaat tcctgaagat tggggcggcg aaacaatttt
    21001 cgttccactt tctgcattaa gtggtgatgg tatcgacgat ttattagaaa tgataggatt
    21061 agttgcagaa gttcaagaac ttaaagcaaa tcctaaaaac cgtgctgttg gtacagttat
    21121 cgaagctgaa ttagataaat cacgtggtcc ttctgcatca ttattagtac aaaacggtac
    21181 attaaatgtt ggtgatgcga ttgtagttgg taatacttac ggccgtatcc gtgcaatggt
    21241 taatgactta ggtcaaagaa tcaaaacggc tggtccatca acgcctgttg aaattacagg
    21301 tattaatgat gtgccacaag ctggggatcg ctttgttgta tttagtgatg aaaaacaagc
    21361 tcgtcgtatt ggtgaatcaa gacacgaagc tagcattata caacaacgtc aagaaagtaa
    21421 aaatgtttca ttagataacc tgtttgaaca aatgaaacaa ggtgaaatga aagatttaaa
    21481 cgttattatt aaaggtgatg ttcaaggttc tgttgaagct ttagctgcat cattaatgaa
    21541 aattgatgtt gaaggcgtaa atgttcgtat cattcataca gcggttggtg caattaatga
    21601 gtcagacgtg acacttgcta atgcctcaaa tggtattatc attggtttca atgttcgtcc
    21661 agacagtggt gcaaaacgtg ctgcagaagc tgaaaatgtt gatatgcgtt tacacagagt
    21721 tatttataat gttatcgaag aaattgaatc agcgatgaaa ggtttacttg atccagaatt
    21781 tgaagaacaa gttatcggac aagctgaagt tcgtcaaaca ttcaaagttt ctaaagttgg
    21841 tactattgct ggatgttatg ttactgaagg taaaattacg cgaaatgctg gtgtacgtat
    21901 tattcgtgat ggtattgttc aatatgaagg cgaattagat acacttaaac gtttcaaaga
    21961 tgatgctaag gaagttgcaa aaggttatga atgtggtatt acaattgaaa actacaatga
    22021 ccttaaagaa ggcgatgtta tcgaagcatt tgaaatggtt gaaattaagc gttaattaaa
    22081 taaattacaa gctaaaagta tagttaagat tgatatgctc cctataaata ttgcactttt
    22141 taagtgtcta ctttataggg agcatatttg atactagctt ttggtttttt attagaatag
    22201 attacctatt aaaagttacg ttatatggac atgattttgt ataaaatttt gtggtggcct
    22261 agaatgattt ttaatgacaa aatataatgt cgactattat tggaaaattt tctgttgaaa
    22321 tgcctatctt acggcaaact ttatttgatt ttataggctt aatttattaa aataacgtgt
    22381 gagctaaaat aattgtttaa gcattgttac actaaaaaat gcaaataaca attgaactta
    22441 aagataaaga ggtgacaaga atgagcagta tgagagcaga gcgtgttggt gaacaaatga
    22501 agaaggaatt aatggatatc atcaacaata aagtcaaaga tcctcgagtt ggttttatta
    22561 caattacaga tgttgtttta acaaatgatt tatcgcaggc taaagtattt ttaactgtat
    22621 taggtaacga taaagaagta gaaaatacat ttaaagcact tgataaagca aaaggcttca
    22681 ttaagtctga attaggttct agaatgcgat tacgtattat gccggaatta atgtatgaat
    22741 atgatcaatc aatcgaatat ggtaataaaa ttgaacgaat gattcaagat ttacacaaac
    22801 aagatagata atttagtgtt aggtatctgg aaaatgtttg ataatttctt aatatcggta
    22861 tattaacatt aaacagttaa tacatagatg tgtagaaata gttaacattt tccagttttt
    22921 ttatgaataa atttagttga tacgctatta aaatatattt taaaaaagaa ggtgactata
    22981 tgtataatgg gatattacca gtatataaag agcgcggttt aacaagtcat gacgttgtat
    23041 tcaaattgcg taaaatatta aaaactaaaa aaataggtca cacgggtacg cttgatcccg
    23101 aagttgcagg cgtgttaccg gtatgtatag gtaatgcaac gagagttagt gattatgtta
    23161 tggatatggg caaagcttat gaagcaactg tatcgatagg aagaagtaca acgactgaag
    23221 atcaaacggg tgatacattg gaaacaaaag gtgtacactc agcagatttt aataaggacg
    23281 atattgaccg attgttagaa agttttaaag gtatcattga acaaattccg ccgatgtact
    23341 catccgtcaa agtaaatggt aaaaaattat atgaatatgc gcgtaataat gaaacagttg
    23401 aaagaccaaa gcgtaaagtt aatattaaag acattgggcg tatatctgaa ttagatttta
    23461 aagaaaatga gtgtcatttt aaaatacgcg tcatctgtgg taaaggtaca tatattagaa
    23521 cgctagcaac tgatattggt gtgaaattag gctttccggc acatatgtcg aaattaacac
    23581 gaatcgagtc tggtggattt gtgttgaaag atagccttac attagaacaa ataaaagaac
    23641 ttcatgagca ggattcattg caaaataaat tgtttccttt agaatatgga ttaaagggtt
    23701 tgccaagcat taaaattaaa gattcgcaca taaaaaaacg tattttaaat gggcagaaat
    23761 ttaataaaaa tgaatttgat aacaaaatta aagaccaaat tgtatttatt gatgatgatt
    23821 cagaaaaagt attagcaatt tatatggtac accctacaaa agaatcagaa attaaaccta
    23881 aaaaagtctt taattaaagg agatagaatt tatgaaagtc atagaagtga cacatcctat
    23941 acaatctaaa cagtatatta cagaggatgt tgcaatggca ttcggatttt tcgatggcat
    24001 gcataaaggt catgacaaag tctttgatat attaaacgaa atagctgagg cacgcagttt
    24061 aaaaaaagcg gtgatgacat ttgatccgca tccgtctgtc gtgttgaatc ctaaaagaaa
    24121 acgaacaacg tatttaacgc cactttcaga taaaatcgaa aaaattagcc aacatgatat
    24181 tgattattgt atagtggtta atttttcatc taggtttgct aatgtgagcg tagaagattt
    24241 tgttgaaaat tatataatta aaaataatgt aaaagaagtc attgctggtt ttgattttac
    24301 ttttggtaaa tttggaaaag gtaatatgac tgtacttcaa gaatatgatg cgtttaatac
    24361 gacaattgtg agtaaacaag aaattgaaaa tgaaaaaatt tctacaactt ctattcgtca
    24421 agatttaatc aatggtgagt tgcaaaaagc gaatgatgct ttaggctata tatattctat
    24481 taaaggcact gtagtgcaag gtgaaaaaag gggaagaact attggcttcc caacagctaa
    24541 cattcaacct agtgatgatt atttgttacc tcgtaaaggt gtttatgctg ttagtattga
    24601 aatcggcact gaaaataaat tatatcgagg ggtagctaac ataggtgtaa agccaacatt
    24661 tcatgatcct aacaaagcag aagttgtcat cgaagtgaat atctttgact ttgaggataa
    24721 tatttatggt gaacgagtga ccgtgaattg gcatcatttc ttacgtcctg agattaaatt
    24781 tgatggtatc gacccattag ttaaacaaat gaacgatgat aaatcgcgtg ctaaatattt
    24841 attagcagtt gattttggtg atgaagtagc ttataatatc tagagttgcg tatagttata
    24901 taaacaatct ataccacacc tttttcttag taggtcgaat ctccaacgcc taactcggat
    24961 taaggagtat tcaaacattt taaggaggaa attgattatg gcaatttcac aagaacgtaa
    25021 aaacgaaatc attaaagaat accgtgtaca cgaaactgat actggttcac cagaagtaca
    25081 aatcgctgta cttactgcag aaatcaacgc agtaaacgaa cacttacgta cacacaaaaa
    25141 agaccaccat tcacgtcgtg gattattaaa aatggtaggt cgtcgtagac atttattaaa
    25201 ctacttacgt agtaaagata ttcaacgtta ccgtgaatta attaaatcac ttggtatccg
    25261 tcgttaatct taatataacg tctttgaggt tggggcatat ttatgttcca accttaattt
    25321 atattaaaaa agctttttac aaatattaac atttattata tgttaagcta atattgagtg
    25381 aataataagg ttacaatgag ataaagatga tataagtaca cctagagtaa taatcaagat
    25441 attaaaaata aagtatgttt ttttaaaaaa tataacttat atttatactg ataagggtgg
    25501 gacgataagt ctattttgta aataatagat ggatatcccg ctctcttttt ttccaattca
    25561 atattttata actaatatta aaatacgata ataaatgata tgatataact attagattca
    25621 agagaggaga tttataatgt ctcaagaaaa gaaagttttt aaaactgaat gggcaggaag
    25681 atctttaacg attgaaacag ggcaattagc taaacaagca aatggcgctg tattggttcg
    25741 ttatggagat acagtcgtgt tatcgacggc aactgcatca aaagaacctc gtgatggaga
    25801 tttcttccca ttaacagtga actatgaaga aaaaatgtac gctgcgggta aaattcctgg
    25861 tggatttaaa aagagagaag gacgtcctgg tgacgatgca acattaactg cgcgattaat
    25921 tgatagacca attagacctt tattccctaa aggatataag catgatgttc aaattatgaa
    25981 catggtatta agtgcagatc ctgattgttc accacaaatg gctgcaatga ttggttcatc
    26041 tatggcgctt agtgtgtcgg atattccatt ccaagggcca atcgccggtg taaatgtggg
    26101 ttatattgac ggtaaatata tcattaaccc aacagtagaa gaaaaagaag tttctcgttt
    26161 agaccttgaa gtagctggtc ataaagatgc ggtaaacatg gtagaggcag gcgctagtga
    26221 gattactgaa caagaaatgt tagaggcgat tttctttggt catgaagaga ttcaacgttt
    26281 agttgatttc caacaacaaa tcgtcgacca cattcaacct gttaaacaag aatttattcc
    26341 agcagagcgt gatgaagcgc tagttgaacg tgtaaaatct ttaaccgaag aaaaaggact
    26401 taaagaaaca gttttaacat ttgataaaca acaacgagat gaaaatcttg ataacttaaa
    26461 agaagaaatc gtcaatgaat ttatcgatga agaagatcca gagaatgaat tacttattaa
    26521 agaagtttat gcaattttaa atgaattagt gaaagaagaa gttcgacgtt taattgcaga
    26581 tgaaaaaatt agaccagacg gccgtaaacc tgatgaaatc cgtccattag attctgaagt
    26641 tggtatttta cctagaacgc atggttcagg tctatttaca cgtggtcaga ctcaagcact
    26701 ttcagtttta acattaggtg ctttaggcga ttatcaatta attgatggtt taggacctga
    26761 agaagaaaaa agattcatgc atcattacaa cttcccgaat ttttcagtag gtgaaactgg
    26821 tccagtacgt gcgccaggtc gtcgtgaaat tggacatggt gcgttaggtg aaagagcatt
    26881 aaaatatatt attcctgata ctgctgattt cccatataca attcgtattg taagtgaggt
    26941 acttgaatca aatggttcat catctcaagc gtcaatttgt ggatcaacat tagcattaat
    27001 ggatgcgggc gtaccgatta aagcaccagt tgctggtatt gctatgggcc ttgttacacg
    27061 tgaagatagc tatacgattt taactgatat ccaaggtatg gaagatgcat taggtgatat
    27121 ggactttaaa gtcgctggta ctaaagaagg tattacagca atccaaatgg atattaaaat
    27181 tgacggttta acgcgtgaaa ttatcgaaga ggctctagaa caagcgagac gtggtcgttt
    27241 agaaataatg aatcatatgt tacaaacaat tgatcaacca cgtactgaat taagtgctta
    27301 cgcgccaaaa gttgtaacta tgacaattaa accagataag attagagatg ttatcggacc
    27361 tggtggtaaa aaaattaacg aaattattga tgaaacaggt gttaaattag atattgaaca
    27421 agatggtact atctttattg gtgctgttga tcaagctatg ataaatcgtg ctcgtgaaat
    27481 cattgaggaa attacacgtg aagcggaagt aggtcaaact tatcaagcca ctgttaaacg
    27541 tattgaaaaa tacggtgcgt ttgtaggcct attcccaggt aaagatgcgt tgcttcacat
    27601 ttcacaaatt tcaaaaaata gaattgaaaa agtggaagat gtattaaaaa tcggtgacac
    27661 aattgaagtt aagattactg aaattgataa acaaggtcga gtaaatgctt cacatagagc
    27721 attagaagaa taatatttaa agtcatatga cgacaatgta tcgtcatgtg atttttttat
    27781 gccacttttt acgaagtgac ccgttttgaa tttgttgtat tgaacatttt aaaacgcttt
    27841 attattttgt gtgcaactgt taattatcct gtatgtatag tgattaatag tgtacatcaa
    27901 gtgtttttta acttataatg aatagtgagt ttatatatgg acgggtaaca aatttaggag
    27961 gtaagatttt gagtttaata aagaaaaaga ataaagatat tcgcattata ccattaggcg
    28021 gtgttggcga aattgctaaa aatatgtata tcgttgaagt agacgatgaa atgtttatgt
    28081 tagatgctgg acttatgttt ccagaagacg aaatgctagg tattgatatt gttataccag
    28141 acatttcata cgtacttgaa aataaagata aattgaaggg tatattcctt acacacggac
    28201 atgagcacgc gattggtgca gtgagttatg ttttagaaca attagatgca ccagtatatg
    28261 gatctaaatt gacaatagcg ttaattaaag aaaatatgaa agcccgtaat attgataaaa
    28321 aagttcgcta ctatacagtt aataatgatt caattatgag attcaaaaac gtgaatatta
    28381 gtttctttaa tacgacacac agtattcctg atagtttagg tgtttgtatt cacacttcat
    28441 atggtgccat tgtgtataca ggtgaattta agtttgacca aagtttacat ggacattatg
    28501 caccagatat taaacgtatg gcagagattg gtgaagaagg cgtatttgtc ttaatcagtg
    28561 attctactga ggcagagaaa cctggatata atactccgga aaatgtgatt gaacatcata
    28621 tgtatgatgc ttttgcaaaa gtgcgaggtc gcttgatagt ttcatgttat gcttcgaact
    28681 ttatacgtat tcagcaagtt ttaaatattg ctagcaagct aaatcgtaaa gtgtcatttt
    28741 taggaagatc acttgaaagt tcatttaata ttgctcgtaa aatggggtat ttcgacattc
    28801 ctaaagattt gctaattcct ataacagaag ttgataatta tcctaaaaat gaagtgataa
    28861 ttatagctac tggtatgcaa ggagaacctg tagaagcctt aagtcaaatg gcgcaacata
    28921 agcataaaat tatgaatatc gaagaaggcg attctgtatt tttagcaatt acggcttctg
    28981 ctaatatgga agttatcatt gcgaatacat taaatgagct tgtacgtgct ggcgcacata
    29041 ttattccaaa taacaaaaag attcatgctt caagtcatgg ttgcatggaa gaattaaaaa
    29101 tgatgattaa tattatgaaa cctgaatact ttattcctgt acaaggtgaa tttaaaatgc
    29161 agatagcaca tgcgaagcta gcagctgaag caggtgttgc accagaaaag attttccttg
    29221 tggaaaaagg agatgtcatt aattacaacg gtaaagatat gatattaaat gaaaaggtaa
    29281 attcaggaaa tattttaata gatggcattg gtattgggga tgtaggaaat atcgtgttga
    29341 gagaccgtca tcttttagca gaagatggta tctttattgc tgttgtaacg ttagatccta
    29401 aaaatagacg tatagctgcg ggacctgaaa ttcaatctcg tgggtttgta tatgtacgtg
    29461 aaagtgaaga cttattacgt gaagcagaag agaaagtacg tgaaatagta gaggctggtt
    29521 tacaagaaaa acgcatagaa tggtctgaaa ttaaacaaaa tatgcgtgat caaattagta
    29581 aactattatt cgaaagtaca aaacgtcgtc ctatgattat tccagtaatt tctgaaattt
    29641 aatcaaaaag tcattaacat aaaagaggtc agaacaagtc actgaaatat aatggttgtc
    29701 atggacaatt tacttatatt ttatgatggt caattgaagg ggtaacgatt aatctgttat
    29761 cttaagtaaa ttgatacata gatgatattg ttctaacctc tttcatcgtc tgtttggact
    29821 acatattcta aacatcaaat aggaaattat atataataac gtcgttttaa ctaaggcaac
    29881 ataaggaggt gcgtcaattg gcacaagcaa aaaagaaatc gacagctaag aaaaaaacaa
    29941 catcaaaaaa aagaacaaat tcgaggaaaa agaagaatga taatccgata cgttatgtca
    30001 tagctatttt agtagttgta ttaatggtgt tgggtgtttt ccaattagga ataataggtc
    30061 gtctaattga cagcttcttt aattatttat ttgggtacag tagatattta acatatattt
    30121 tagtactctt agcaactggt tttattacat actctaaacg tattcctaaa actagacgaa
    30181 cggctggttc gattgtattg caaattgcat tgctatttgt atcacagtta gtttttcatt
    30241 ttaatagtgg tatcaaagct gaaagagaac ctgtactttc ttatgtgtat cagtcatacc
    30301 aacacagtca tttcccaaat tttggtggcg gtgtattagg cttttattta ttagagttaa
    30361 gcgtaccttt aatttcatta tttggtgtat gtattattac tattttatta ttatgctcaa
    30421 gtgttatttt attaacaaac catcaacatc gtgaagttgc aaaagttgca ctggaaaata
    30481 taaaagcttg gtttggttca tttaatgaaa aaatgtcgga aagaaaccaa gaaaaacaat
    30541 tgaagcgtga agaaaaagca agacttaaag aagaacaaaa ggcacgtcaa aatgaacagc
    30601 cacaaataaa agatgtgagt gattttacgg aagtgcctca agaaagagat attccaattt
    30661 atgggcatac tgaaaatgaa agtaaaagcc agagtcaacc aagtcgaaaa aaacgagtgt
    30721 ttgatgcaga gaatagttcg aataacatcg taaatcatca tcaagcagat cagcaagaac
    30781 aattaacaga acaaactcat aacagtgttg aaagtgaaaa cactattgaa gaagctggtg
    30841 aagttacgaa tgtatcgtat gttgttccac cgttaacttt acttaatcaa cctgcaaaac
    30901 aaaaagcaac atctaaagct gaagtgcaac gtaaaggaca agtactagag aatacattaa
    30961 aagattttgg ggtaaatgca aaagtgacac aaattaaaat tggtcctgca gtaactcaat
    31021 atgaaattca accagctcaa ggggttaaag tgagtaaaat tgtaaacttg cataatgata
    31081 ttgcattagc tttagcagca aaagatgtta gaatcgaagc gccaatacct ggtcgttctg
    31141 cagtaggtat tgaagtgcca aatgagaaaa tttcattagt ttcactaaaa gaagttttag
    31201 atgaaaaatt cccgtctaat aataaactag aagttggatt aggaagagat atatcaggtg
    31261 atccaattac tgttccacta aatgaaatgc cacacttatt ggtggcagga tcgacgggta
    31321 gtggtaaatc tgtttgtata aatggtatta ttacaagtat tttattaaat gctaagccgc
    31381 atgaagttaa acttatgtta atcgatccga aaatggttga actaaatgtt tataacggaa
    31441 ttccacactt attaattccg gttgttacaa atcctcataa agctgctcaa gctttagaaa
    31501 aaattgtagc tgagatggaa agacgttatg atttattcca acattcatca actagaaaca
    31561 ttaaaggtta taacgaatta atccgtaagc aaaatcaaga attagatgag aagcaaccag
    31621 aattacctta tatcgttgtt attgtagatg agcttgcaga tttaatgatg gtagctggta
    31681 aagaagttga aaatgcgatt caacgtatta cacaaatggc acgtgcagca ggtatacatt
    31741 taattgtagc gacacaaaga ccttctgtgg atgtaattac aggtatcatt aaaaataata
    31801 ttccatctag aatagctttt gctgtgagtt ctcaaacaga ttcaagaact attattggta
    31861 ctggcggcgc agaaaagtta cttggtaaag gtgacatgtt atacgttgga aatggtgact
    31921 catcacaaac acgtattcaa ggggcgtttt taagtgacca agaggtgcaa gatgttgtaa
    31981 attatgtagt agaacaacaa caggcaaatt atgtaaaaga aatggaacca gatgcaccag
    32041 tggataaatc ggaaatgaaa agtgaagatg ctttatatga tgaagcgtat ttgtttgttg
    32101 ttgaacaaca aaaggcaagt acatcattgt tacaacgcca atttagaatt ggttataata
    32161 gagcatctag gttgatggat gatttagaac gcaatcaggt aatcggtcca caaaaaggaa
    32221 gcaagcctag acaagtttta atagatctta ataatgacga ggtgtaaaaa aatgtcagaa
    32281 atgaatgcgg tatataacgt taaacaatac attttaaatt tgattaagca aaataaattg
    32341 gaatatggtg accaacttcc aagtaattta tcaattgcca gagaattaaa tgtaaaaacc
    32401 gacgatgttt atgaagcaat tcaggcattg attactgaac aagtcattaa agataatttt
    32461 gaagagggca caagtgttaa gtcactgccc cctttctttt atccattgaa tgaacttata
    32521 agtattgggc aaatgattaa aaatgcagga tttgaatgcg gaactgaata cttaaatttt
    32581 gatgagcaac cagcaactat gttagatgca aatttgttga gcgttgaaga aggatatcca
    32641 gtaaccatta tagaacgatt acgaactgcc gatggagaac cggtcgtcta ttgtttagat
    32701 aaaattgcta aaaaagaatt aacatgtaca gagtatcaaa tgagcaatgg atcgattcta
    32761 agtgcgataa aagaacaaag taatcataat atttgttatg ctgatacaga aattgaagcg
    32821 gtaaattatg aacctcgaat atccgaagta ctgaatgctt cgccacacga aggtttgatt
    32881 ttattaaaaa ttacgcacta taatgaatca gatgaaccta ttttgtattc attaaattat
    32941 atgaaaaata gcttagttca atttaaaatc actagaaaaa tatagatgta agaagatata
    33001 gaggaggcta tatatttgag tagacaatct caaccaaata tacatatcaa agtttcacca
    33061 acaactaaat ttaaaacaac tactatagtt tttaaattta tggcaccttt agaatatgac
    33121 acaataacag ctagatcatt attaagcaaa ttattagttc gagcaactaa gaaatggcca
    33181 accgataagt cgtttaataa tcacttagcc gatttatatg gtgcgtatgt gaatagtaca
    33241 atttcaaaat tcaaagatca gcatgtcatt acattttcat tagaaattgt taatgaacgt
    33301 tatttaagaa acggtgaatc attatttaat caaggattag atttattaca agaaatcatt
    33361 tggaatccat taattgaaaa taaagcattc aatgataatt ttgttaacca agagaaaaca
    33421 ttattagcca aaaaaataga agcaatggta gataataaag cacaatattc gtttttaaaa
    33481 ttactcgacc atatgtttga aaatgaagca tataaatact tatctacagg acaactagaa
    33541 caaatcccac atattactgc tgaaacacta tatcatacat atcaatcaat gattaataat
    33601 gatcaatgtt ctgtttatgt tgtcggcaat gtagaacctg aaagtgttga gaaacaaata
    33661 cgtgaaaaat ttgcacttaa accattcgat aaacatcaat tccaacattc tactcatcat
    33721 ttacacgatg aagaagttga ttatattgtt gaatatgatg acgtggatca agctaaatta
    33781 aatatgggat accgttttcc aacacaatat ggacaaagtg gatatgctgc ctttgttgta
    33841 tttaacatga tgtttggagg agatccttca tctgttttat ttaatgaagt gcgagaaaag
    33901 caaagtttag cgtactctat acattcacaa attgatggca aaaatggcta tttatttgtt
    33961 ttgagtgggg tttcaagtga taagtacgaa actgcaaaag acactattat aagtgaattt
    34021 gaaaaaataa aagcaggaga tttcactgaa gaaaaattag agttagctaa aaaagtaatc
    34081 atttctcatc gatatgaatc tgaagatcgt ccgaaaagta ttatagagat tatgcataac
    34141 caaatattat tagagcaacc acaaagcaaa gaaacattta taaatgatat acagaaggta
    34201 attcgcgaag atattgtttc tgttgctgaa aaagcatttt tagatacaat ctatgtgttg
    34261 acaaaaggag gggataaata atgaaagagc gttattatga attaatagac gaaagagtat
    34321 tcgaacaaga attagaaaat ggtttacgat tatttattat ccccaaacca ggttttcaaa
    34381 agacatttgt cacttacact acacaatttg gttcattaga taatcaattc aaaccccttg
    34441 gacaagacca atttgttact gtacctgatg gagttgctca ctttttagaa cataaattat
    34501 ttgaaaaaga agaagaagac ttatttactg cgtttgctga agataacgca caagcaaatg
    34561 cgtttacaag ctttgatcgt acaagctact tgttcagtgc aactgataat attgaaaaca
    34621 acattaaacg tttacttaca atggttgaaa cgccttattt tacaaaagaa actgttgata
    34681 aagaaaaagg tattattgca gaagaaataa aaatgtatca agagcaacct ggatataaat
    34741 taatgtttaa tacattgcgt gcaatgtatc aacaacatcc aatacgtgtt gatattgccg
    34801 gtagtgtaga aagtatatac gatattacaa aagatgattt gtatctatgt tatgaaacgt
    34861 tttatcatcc atcaaatatg gttttatttg ttgttggcga tgtggatcct gaagcaatat
    34921 gtcgaatagt aaaacaacac gaggatgctc gtaataaagt taaccaaccc aaaatcgaac
    34981 gaggacttgt tgatgaaccg gaggatgtta aagaagcatt tgttactgaa tctatgaaaa
    35041 ttcaatcacc aagactaatg cttggtttta aaaataaacc attacaagaa gcgcctcaaa
    35101 aatatgtaca acgtgattta gaaatgtcat tattctttga gttaattttt ggggaagaaa
    35161 cagattttta tcagaattta ttaaacgaag gacttatcga tgatacattt ggttatcaat
    35221 ttgtactaga gccgacgtat agtttttcaa tcgtgacaag tgctactgaa gaaccagata
    35281 aattaaaaaa attattatta gatgagttgc gtgataaaaa aggcaatttc caagatgcag
    35341 aagcatttga acttttgaaa aagcaattta taggtgaatt catatcaagt ttaaactcac
    35401 ctgaatatat tgctaatcaa tatactaaat tgtattttga aggtgttagc gtgtttgaca
    35461 tgttagacat tgttgaaaat atcacgttag atagtattaa cgaaacgtca tcgttatatt
    35521 taaatttaga tcagcaagtc gatagtcgtt tggagattaa aaagtaatga aagcattagt
    35581 attaggtggt tctggttcaa ttggttctga gatagtcaaa caattattaa ctgatggatt
    35641 tgaagtttat gtgcaatatt atcgtactga tataaatgaa ttaactagca aatttaatga
    35701 tgataaagtt cgttttatac aagcggattt atctcaaaca attgatattg acaaaacatt
    35761 tggtgacatt aaatcattag actgtttaat atatgcaagt ggtcagtctt tatatggtgt
    35821 tttacaagat atgaaagacc atgatattga tgcatgttat cagttaaatg tcttgcaatt
    35881 aattcgatta tgtagatatt tcgttgatgt tttacgtcaa agtgccaatg gaagaattat
    35941 tgtaatttca tcaatttggg gtgagacagg agctagtatg gaaactattt attcggcgat
    36001 gaaaagtgca caattaggtt tcgttaaggc gcttagtcaa gagcttgcac taacatcagt
    36061 gacagtaaat gctatcgcac ctggatttgt agccggtaat atggcaagtg agtggcaaga
    36121 agatgaactt caagcaatga taactgaatt accacaacag cgattggttt taccgagtga
    36181 ggttgctcat acatgcgcct atttatatca cccaaatgct agaagtgtta ctggaactat
    36241 acagaaagtt aatggtgctt ggtatattta aaatatagaa ctatttttat gagcaaatgt
    36301 ttttatgatt gatgttataa tatgaatatt acaatgaatc ataatttgtt aattaaacaa
    36361 ggggtgaggt tcaccatgac agttgcagag aaaaaagaat ggtacctaga atacgaaatt
    36421 gaaattaata gaccgggtct tttaggtgat gtatctagtt tattaggtat gttaggtata
    36481 agtattgtta caattaatgg tgttgatcaa ggtaaacgag gccttttaat taaaacagac
    36541 aatcttgaaa aagttgaacg ttttgagcaa atagctcgtg gtataaatga aattgaaata
    36601 acaaagctta aaaaaccaga attaagagac cgtcttgcag taagacatgg aagatatatt
    36661 gagcaagatg caaaagataa gaaaaccttt cgatttgagc gtgaagattt aggcttgtta
    36721 gtagactttt tagctgaatt gttcaaagaa gaaggtcata agttgattgg cattagaggt
    36781 atgccacggg ttggtaaaac tgaatcaatt gttgcgggaa gtgtttgtgc acataagaga
    36841 tggttattta ttagttctac tttaataaaa caaactgtac gtagctctct aattaaaggg
    36901 gaatatgatg ccaatcatgt atacattatt gatggtgcag ttactgccag agaatctaat
    36961 ccaaaacatc aagagcttgt taacgaagtt atgacgttac catcaatcaa agtcgttgaa
    37021 catccagatt tatttgttga aacaagtact tgtacaatgg aagattttga ctatattatc
    37081 gaattgagag aaaatgaaaa tcaagaaata cattacgaag aaatgaagaa acagacagtc
    37141 caaagtaaga ataatttaga ttttggagat ccgtttggtg gtggttttgg tttcttcgag
    37201 taagtgtaag gaggctatga attgaaaacg gtcggtgaag cgctaaaagg tagacgtgaa
    37261 aggttaggaa tgactttaac agaattagag caacgtactg gaattaaacg tgaaatgcta
    37321 gtgcatattg aaaataatga attcgatcaa ctaccgaata aaaattacag cgaaggattt
    37381 attagaaaat atgcaagcgt agtaaatatt gaacctaacc aattaattca agctcatcaa
    37441 gatgaaattc catcgaacca agccgaatgg gacgaagtaa ttacagtttt caataataat
    37501 aaagacttag attataagag taaatcaaaa gagccaatac aattattagt aatcatgggt
    37561 attacagttt taataacttt attgttatgg atcatgttag ttttaatatt ttaacagaaa
    37621 taaattagtg agaaatgagg atgtataatg aatattccga accagattac ggtttttaga
    37681 gtagtgttaa taccagtttt tatattgttt gcgttagttg attttggatt tggcaatgtg
    37741 tcatttctag gaggatatga aataagaatt gagttattaa tcagtggttt tatttttata
    37801 ttggcttccc ttagcgattt tgttgatggt tatttagcta gaaaatggaa tttagttaca
    37861 aatatgggga aatttttgga tccattagcg gataaattat tagttgcaag tgctttaatt
    37921 gtacttgtgc aactaggact aacaaattct gtagtagcaa tcattattat tgccagagaa
    37981 tttgccgtaa ctggtttacg tttactacaa attgaacaag gattcgtaag tgcagctggt
    38041 caattaggta aaattaaaac agcagttact atggtagcaa ttacttggtt gttattaggt
    38101 gatccattgg caacattgat tggtttgtca ttaggacaaa ttttattata cattggcgtt
    38161 atttttacta tcttatctgg tattgaatac ttttataaag gtagagatgt ttttaaacaa
    38221 aaataaatat ttgtttatac tagatttcat tttcatatgg aatctagttt ttttaatccc
    38281 aattttagaa attagccacg caattgttta taatgatata ttgtaaaaca atatttgttc
    38341 atttttttag ggaaaatctg tagtagcatc tgatacattg aatctaaaat tgatgtgaat
    38401 ttttaaatga aatacatgaa aaaatgaatt aaacgataca agggggatat aaatgtcaat
    38461 tgccattatt gctgtaggct cagaactatt gctaggtcaa atcgctaata ccaacggaca
    38521 atttctatct aaagtattta atgaaattgg acaaaatgta ttagaacata aagttattgg
    38581 agataataaa aaacgtttag aatcaagtgt acgtcatgcg ctagaaaaat atgatactgt
    38641 tattttaaca ggtggcttag gtcctacgaa agatgactta acgaagcata cagtggccca
    38701 gattgttggt aaagatttag ttattgatga gccttcttta aaatatattg aaagctattt
    38761 tgaggaacaa ggacaagaaa tgacacctaa taataaacaa caggctttag taattgaagg
    38821 ttcaactgta ttaacaaatc atcatggcat ggctccagga atgatggtga attttgaaaa
    38881 caaacaaatt attttattac caggtccacc gaaagaaatg caaccaatgg tgaaaaatga
    38941 attgttgtca cattttataa accataatcg aattatacat tctgaactat taagatttgc
    39001 gggaataggt gaatctaaag tagaaacaat attaatagat cttatcgata aacagactaa
    39061 tcctacgatt gcgcctttgg cgggaagtca tgaagtatat attagattga ctgcaaatgc
    39121 cgactcaaaa gaacaagcac aatcattgat tcaacctgtt aaacaagaaa ttcttgatcg
    39181 tattggagaa tattattatg gttcagatga cacattaatt gagcaagctg taataaagaa
    39241 aattcatgaa ccttttgtaa tatatgatgg tattactaat ggtgctttat atcatcgatt
    39301 gaaagaagtg gatttaaacg atgttctaaa gggtatgatt aatcacaatg aaaactttgt
    39361 tgatattaat aaacctattg agcagcaatt aaaagatgca gtgcaatttg ttaataaatt
    39421 gtttaatgtg tcatcagcaa ttattctatt agagtatgat ggtgtagttc atataggcta
    39481 tgataataac tttgaattta aaactgagca atttaaaatg tctaaatcta gaaatttatt
    39541 aaagaacaga agtcaaaatt atgcgctcat aagattatta aattggctta gaacaacaaa
    39601 ttaattgtat tatcgataaa aatataagca cgtttgttcg tttttgcgtt ttgatttcaa
    39661 gattttatac gaacaaatat tcgcaaaaca cttgtatttt attttgaatc cttgtatagt
    39721 attggtaaga taattaaaag atagcaattt caattaggag gtctcgcttt ggataacgat
    39781 cgtcaaaaag ctttagatac agtaattaaa aatatggaga aatctttcgg taaaggtgcc
    39841 gtaatgaagt tgggtgacaa tataggtcgc cgagtttcaa ctacatcaac tggttcagtt
    39901 acattagata atgcgctagg tgtaggtggc tatcctaaag gacgaattat tgaaatttat
    39961 ggtcctgaaa gttctggtaa gacaacagta gcgcttcacg ctattgctga agtacaaagt
    40021 aatggcgggg tggcagcatt tatcgatgct gaacatgctt tagatccaga atatgctcaa
    40081 gcattaggcg tagatatcga taatttatat ttatcgcaac cggatcatgg tgaacaaggt
    40141 cttgaaatcg ccgaagcatt tgttagaagt ggtgcagttg atattgtagt tgtagactca
    40201 gttgctgctt taacacctaa agctgaaatt gaaggagaaa tgggagacac tcacgttggt
    40261 ttacaagctc gtttaatgtc acaagcgtta cgtaaacttt caggtgctat ttctaaatca
    40321 aatacaactg ctattttcat caaccaaatt cgtgaaaaag ttggtgttat gttcggtaat
    40381 ccagagacta caccaggtgg acgtgcatta aaattctata gttcagtaag actagaagta
    40441 cgtcgtgcag aacagcttaa acaaggacaa gaaattgtag gtaatagaac taaaattaaa
    40501 gtcgttaaaa ataaagtggc accaccattt agagtagctg aagttgatat tatgtatgga
    40561 caaggtattt ctaaagaggg tgaacttatt gatttaggtg ttgaaaacga catcgttgat
    40621 aaatcaggag catggtattc ttacaatggc gaacgaatgg gtcaaggtaa ggaaaatgtt
    40681 aaaatgtact tgaaagaaaa cccacaaatt aaagaagaaa ttgatcgtaa attgagagaa
    40741 aaattaggta tatctgatgg tgatgttgaa gaaacagaag atgcaccaaa gtcattattt
    40801 gacgaagaat agtacacaaa tttatatcta tagttaaact tagcaaatat ccttatagga
    40861 ttgattgaaa gtgatattca tctcataaag ctagaataat atctaacttt atgggataca
    40921 ctacaaatcg agactataag gttttttatt ttatttatta ttacattatc aatagtttta
    40981 taatcgagct tcaaaacttt agaaaatagt agaaatagca ttcaatatag tgcaaaagtg
    41041 caaattgata acttgacact tatctcctat aaaccgtaca attaatttgt atgatttata
    41101 tataatttca taaagtcata ttgaatttca tataaagagc aaaccctaga aaaggaggtg
    41161 tttgtgtgaa tttattaaac ctcctactca ttttgctggg gatcattcta ggagttgttg
    41221 gagggtatgt tgttgcccga aatttgttgc ttcaaaagca atcacaagct agacaaactg
    41281 ccgaagatat tgtaaatcaa gcacataaag aagctgacaa tatcaaaaaa gagaaattac
    41341 ttgaggcaaa agaagaaaac caaatcctaa gagaacaaac tgaagcagaa ctacgagaaa
    41401 gacgtagcga acttcaaaga caagaaaccc gacttcttca aaaagaagaa aacttagagc
    41461 gcaaatctga tctattagat aaaaaagatg agattttaga gcaaaaagaa tcaaaaattg
    41521 aagaaaaaca acaacaagta gatgcaaaag agagtagtgt tcaaacgtta ataatgaagc
    41581 atgaacaaga attagaacgc atctccggtc tcactcaaga agaagctatt aatgagcaac
    41641 ttcaaagagt agaggaagaa ctgtcacaag atattgcagt acttgttaaa gaaaaagaaa
    41701 aagaagctaa agaaaaagtt gataaaacag caaaagaatt attagctaca gcagtacaaa
    41761 gattagcagc agatcacaca agtgaatcaa cggtatcagt agttaactta cctaatgatg
    41821 agatgaaagg tcgaatcatt ggacgagaag gacgaaacat ccgcacactt gaaactttaa
    41881 ctggcattga tttaattatt gatgacacac cagaagcggt tatattatct ggttttgatc
    41941 caataagaag agaaattgct agaacagcac ttgttaactt agtatctgat ggacgtattc
    42001 atccaggtag aattgaagat atggtcgaaa aagctagaaa agaagtagac gatattatta
    42061 gagaagcagg tgaacaagct acatttgaag tgaacgcaca taatatgcat cctgacttag
    42121 taaaaattgt agggcgttta aactatcgta cgagttacgg tcaaaatgta cttaaacatt
    42181 caattgaagt tgcgcatctt gctagtatgt tagctgctga gctaggcgaa gatgagacat
    42241 tagcgaaacg agctggactt ttacatgatg ttggtaaagc aattgatcat gaagtagaag
    42301 gtagtcatgt tgaaatcggt gtagaattag cgaaaaaata tggtgaaaat gaaacagtta
    42361 ttaatgcaat ccattctcat catggtgatg ttgaacctac atctattata tctatccttg
    42421 ttgctgctgc agatgcattg tctgcggctc gtccaggtgc aagaaaagaa acattagaga
    42481 attatattcg tcgattagaa cgtttagaaa cgttatcaga aagttatgat ggtgtagaaa
    42541 aagcatttgc gattcaggca ggtagagaaa tccgagtgat tgtatctcct gaagaaattg
    42601 atgatttaaa atcttatcga ttggctagag atattaaaaa tcagattgaa gatgaattac
    42661 aatatcctgg tcatatcaag gtgacagttg ttcgagagac tagagcagta gaatatgcga
    42721 aataattttt gtctccctca caaattagtg agggagcttt tttaagttgt agtcttaatc
    42781 tagttagaca gcactttatc ggtaataact atattaaaca gtagttattt gaaagtaaga
    42841 cggaccttat attaaataag aagttattgc ttttaataaa aatgttttag gcttcgtaat
    42901 tactatattt atattatgta aacctataaa gatgattgct tttctatcca ataaaaaaga
    42961 agagaagatg taacacatct tctcttctgc aatattaatt aggatttatt tctaagttga
    43021 gttattttaa ttgtaaatct gttttcttta attcttttat aacttctgca gtatcataac
    43081 aatttgttgc aattgttgaa tatctctctg ctaaacgata tgcattaatg taaagcttta
    43141 aactttcttt agctatatcc tctgcatctt cgaattttga tgggttagac ataaccacta
    43201 attctgcaaa tttttctgga tcaatattaa tagacatgta tttatttaca actcctattt
    43261 attttgatgt cttaatacta acatattgaa gttttcagac aaagtaatgt ctctctataa
    43321 ttgaagaaaa ataattcaaa gaatttaata tttactttaa atattagaac gtatgaatta
    43381 aactagtatt tatgagagga tgaacaaaac atgagaataa tgtttatagg ggatatcgta
    43441 ggtaaaattg gacgagacgc aattgaaacg tacatacctc aactgaagca aaagtataaa
    43501 ccaacagtta caattgtaaa tgctgaaaat gcagcacatg gtaaaggttt gactgaaaaa
    43561 atatataaac aattactaag aaatggtgta gatttcatga ctatgggtaa tcacacatat
    43621 ggtcaacgtg aaatttatga ttttatagat gaagcaaaac gactagtaag accagcgaat
    43681 tttccggatg aagcgccggg aattggtatg agatttatac aaattaatga tattaaactt
    43741 gcagttatta atctgcaagg aagagcgttt atgccagata ttgatgatcc ttttaaaaag
    43801 gcagatcaat tagtcaagga agcacaagaa caaactccgt ttatatttgt tgattttcat
    43861 gcagaaacaa cttctgaaaa gtatgcaatg ggatggcatt tagatggtag agctagcgct
    43921 gttgttggaa cgcatacaca cattcaaaca gcagatgaac gtattttacc aaaggggaca
    43981 gggtatataa cggatgttgg tatgacaggt ttttatgatg gcattttagg aataaataaa
    44041 acagaggtaa ttgagcgttt tatcactagt ttgccacaaa gacatgttgt tccaaatgaa
    44101 ggtagaagtg tattatctgg tgttgttatt gatttagaca aagaaggtaa aacaaagcac
    44161 atcgaacgta tattgataaa tgatgaccat ccattttcaa cattttaaaa ttacgtaagt
    44221 aaacattcga attggaccct atcgtccatt agtatgaatt taatatagta ccactgttta
    44281 catagtaaat cggtggttct ttttgttatc atttaatatg aaatatatcc ataggaggca
    44341 tataactatg aaaccacaat tatcgtggaa agttggcggt caacaaggcg aaggtattga
    44401 atcaactggg gaaatcttcg ctacggctat gaatagaaaa ggatattatt tatatggata
    44461 tagacatttt tcaagtcgta tcaaaggtgg acatacgaat aataaaatta gagtttctac
    44521 gacgcctgtt catgcaatta gtgatgattt agatattttg attgcatttg accaagaaac
    44581 aattgatgtt aaccatcatg aaatgagaga agacagtatt attttagctg atgccaaggc
    44641 taaacctgtg aaaccagaag gatgtcatgc acagcttatt gaattacctt ttacagcaac
    44701 cgctaaagaa ttaggtacag cattaatgaa aaacatggtt gcaataggtg ctactagcgc
    44761 attgatgaat ttgaatacaa atacatttga agaacttatt actaatatgt tttctaaaaa
    44821 aggtgacaag gtagttgaag tcaatatcca agcattaaac gaaggttatc aattaatgca
    44881 atctcgctta cctgaaatct acggggactt tgaattagag tcaacagatg cactaccaca
    44941 tctatatatg attggtaacg atgccattgg attaggtgca attgctgcag gttcacaatt
    45001 tatggcggca tatcctatta cacctgcgtc tgaagttatg gaatatatga ttgccaatat
    45061 atctaaagta aacggagcgg ttattcaaac agaagatgaa attgctgctg taactatggc
    45121 tattggtgca aattatggtg gagtcagagc gtttacggct agtgctggtc caggtttatc
    45181 tttaatgatg gaagcaattg gattatctgg tatgactgaa acgccattag tcattattaa
    45241 tacccaacga ggtggacctt ctactggatt acctacgaaa caagaacagt cagatttaat
    45301 gcaaatgatt tatggtacac atggtgatat tccaaaaatt gttgtagcac caacagatgc
    45361 agaagatgca ttttatttaa ctatggaagc atttaattta gcagaacaat atcaatgccc
    45421 tgttatagtt ctaagtgatt tgcaattatc tttaggtaaa caaactgttg aaaaattaga
    45481 ttataatcgt attgaaatta aacgtggtga aatcattcaa tctgatattg aacgtgaaga
    45541 agatgataaa ggttatttca agcgttatgc gttaacatcc gatggtgttt ctcctagacc
    45601 tatccccggt gttaaaggag gtattcatca tataactggt gtggaacaca atgaagaagg
    45661 taaacctagt gaatctgcgt caaatagaca acaacaaatg gaaaaacgaa tgcgtaaaat
    45721 tgagcagtta ctaattgaat cgccagtaga agctaactta caacatgagg atgcagatat
    45781 tctttatatc ggttctattt ctacaaaagg tgcaattcaa gaaggtagta accgtttgaa
    45841 tcaacaaggc ataaaagtta acactataca aattagacaa ttgcatccat tcccaacaag
    45901 cgttattcaa gatgcagtta ataaagcgaa gaaagtcgtt gtagtggagc acaattatca
    45961 aggacaattg gctagtatta taaaaatgaa tgtcaatatt catgataaga ttgaaaatta
    46021 tacaaagtat gatgggacac ctttcctacc acatgaaatc gaagaaaaag gcaaaataat
    46081 tgctactgaa ataaaggaga tggtatagat ggcgacattt aaagatttta gaaataatgt
    46141 taagcctaac tggtgccccg gatgtggcga tttctcagta caagctgcaa ttcaaaaagc
    46201 agccgcaaat atagggttag aacctgaaga agtagctatc atcaccggta taggatgttc
    46261 tggccgtctt tcaggatata ttaattctta tggcgttcat tctattcacg gacgtgcatt
    46321 acctttagct caaggtgtaa aaatggcgaa taaagattta actgttattg catcgggagg
    46381 agatggtgat ggttatgcta taggtatggg gcatacaatc catgctttaa gaagaaatat
    46441 gaacatgacg tatatagtca tggataatca aatttatggt ttgacaaagg gacaaacatc
    46501 gccgtcatca gcagtaggat ttgttactaa aacaacgcca aaaggtaata tagaaaaaaa
    46561 tgttgcgcct ttagaattag cattatcatc tggtgccaca tttgtagccc aaggtttttc
    46621 aagcgatatt aaaggattaa caaaactaat tgaagatgca attaatcatg atggattttc
    46681 attcgttaat gtcttttcac catgtgtgac ttataataaa attaacacat acgattggtt
    46741 taaagaacat ttaacaagtg ttgatgacat tgaaaattat gattctacag ataaacaatt
    46801 agcgactaaa actgttattg aacatgaatc tttagtaact ggtattgttt atcaagataa
    46861 agaaacatca tcatatgaat ctcaaattaa agagttagat gatacaccac ttgctaaaag
    46921 agatatcaaa attactgaag acaccttcaa tgcattaact gaacaattta tttaataatt
    46981 aaaactgagt cgtataaatg tatttataac agatccattt atgctactca gttttttact
    47041 attacaaaaa ataaaggagt ttttaaaaat gaaagacaca ttaatgagta tacaaataat
    47101 tcctaaaaca ccaaacaatg acaatgttat accttacgta gacgaggcga ttaaaataat
    47161 tgacgaatct ggtttgcatt ttagagtagg tccgttagaa acgacagtac aaggaaatat
    47221 gaatgaatgt ttaattttaa tacaatcatt aaatgaacga atggtggaac ttgaatgtcc
    47281 aagtattatt agccaagtta agttttatca tgtgccagat ggcatcacta ttgaaacttt
    47341 aactgaaaaa tatgatgaat aacattaaaa gtgaagtaaa ctggatttga attggcttgt
    47401 tagagatgac gtataacttt aactgttttt gcactttata gttaaattta atataattat
    47461 taaatgatac gggcaaatag aaaggatttt gtaaagtgaa cgaagaacaa agaaaagcaa
    47521 gttctgtaga tgttttagct gagagagata agaaagcaga aaaagattat agtaaatatt
    47581 ttgaacatgt ttatcagccg cctaatttaa aagaagcgaa aaaaagaggt aaacaagaag
    47641 ttcgttataa tagagatttc caaattgatg aaaaatatcg cggtatgggg aacgagcgta
    47701 catttttaat taaaacatat ggatgtcaaa tgaatgcaca tgacactgag gtcattgctg
    47761 gtatacttga agcattaggc tatcaagcaa cgactgatat taacactgca gatgttattt
    47821 taattaatac atgtgcgatt agagaaaatg ccgagaacaa agtgtttagt gaaataggta
    47881 atttgaagca tttgaaaaaa gaacgacctg atattttaat cggtgtttgt ggttgtatgt
    47941 cacaagaaga gtcagtagtg aataaaattt taaaatcgta tcaaaatgta gatatgatat
    48001 ttggtacaca taatattcat catttaccag aaattttaga agaagcatac ttatctaaag
    48061 caatggttgt tgaagtatgg tctaaagaag gagacgttat tgaaaatctt ccaaaagtcc
    48121 gtgaaggcaa cattaaagca tgggtcaata ttatgtatgg ttgtgataag ttttgtacat
    48181 attgtattgt tccatttaca agaggtaaag aacgaagccg tagacctgaa gacattatag
    48241 atgaagtacg tgaacttgct cgtgaaggtt acaaagaaat aacgctttta ggtcaaaatg
    48301 taaattctta tggtaaagat ttacaggata tagaatatga cttaggagat cttttacaag
    48361 caatttctaa aatagcgatt ccaagagttc gtttcacaac aagtcatcct tgggacttta
    48421 cagatcacat gattgatgtt atttcagagg gtggtaatat cgttccgcat atccacttgc
    48481 cagttcaatc tggaaataat gcagtattaa aaataatggg tagaaaatat acacgagaaa
    48541 gttatttgga tttagtaaaa cgaatcaaag atagaattcc taatgtagca ttaactacag
    48601 atattattgt agggtatcca aatgaatcag aggaacaatt tgaagaaact ttaactctgt
    48661 atgatgaagt tggttttgaa catgcatata cgtacttgta ttcacaacgt gatggtacgc
    48721 ctgctgctaa aatgaaagat aatgtacctt taaatgtcaa aaaggaacga ttgcaacgtt
    48781 tgaataaaaa agttggtcat tattcacaaa tagctatgag taagtacgaa ggacaaactg
    48841 taacagtact ttgtgaagga agtagtaaaa aagatgatca ggttcttgct ggctacactg
    48901 ataaaaataa gctagttaat ttcaaagcgc ctaaagaaat gattggtaaa ctagtggaag
    48961 tacgaataga tgaagctaaa cagtattcat taaatggcag ttttataaag gaagtagagc
    49021 cggaaatggt gattcaataa atgtataata aagatgacgt gttgaaccaa gcggataata
    49081 ttgcaaataa aattaaaaat ttggatacta tcaaaacata tcaacaaatt gaagcacaga
    49141 ttcatcagaa ccaaacgata aagactaaaa tggatatgtt aaaaaagcat caaaaacaag
    49201 cagtaaactt tcaaaattac gggaaacaaa atgcgctaga acagtcggaa cataccattc
    49261 agagtataga agcagaaata aatacattgc ccatagttga acagtttcaa acttcacaat
    49321 atgaagcgaa tcaattattg aaaatgtttg tatcaacaat ggaaacacgt ttaaatgacc
    49381 ataataaagc caagcatagt gattaattac aaacaaaaag gagaacaatc atatgaaatc
    49441 aagaaaactg gctataactg cacttttaat tgcaataaat gttgtattaa gcagtattat
    49501 catcattcct ctaggaccag ttaaggcagc accagtacag cattttgtaa atgtattaag
    49561 tgcggtcata gtaggtcctt ggtatggatt agctcaagcg cttatatcat caattttaag
    49621 agttcttttt ggtactggta cagcttttgc atttccgggt agtatgattg gagttttatt
    49681 ggctagtatg ttttacatat atcgtaaaca tatatttatg gccgcggtcg gtgaagtact
    49741 tggaactggt gtcatcggaa gtttaatttg tataccatta gcatatttcc ttgggcttca
    49801 agacttcttc attaaaccgt taatgattac gttcatagtc tcaagtgcta tcggatctat
    49861 tataagttat tt
//
LOCUS       DALPQQ010000005        45519 bp    DNA     linear   BCT 22-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus strain K18-6-464
            SAMD00233528-rid16434743.denovo.005, whole genome shotgun sequence.
ACCESSION   DALPQQ010000005 DALPQQ010000000
VERSION     DALPQQ010000005.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMD00233528
            Sequence Read Archive: DRR236061
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 45519)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 45519)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001543423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001543423.1
            Genome Coverage       :: 77x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/22/2022 17:09:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,811
            CDSs (total)                      :: 2,743
            Genes (coding)                    :: 2,689
            CDSs (with protein)               :: 2,689
            Genes (RNA)                       :: 68
            rRNAs                             :: 2, 4, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 4, 2 (16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 54
            CDSs (without protein)            :: 54
            Pseudo Genes (ambiguous residues) :: 0 of 54
            Pseudo Genes (frameshifted)       :: 27 of 54
            Pseudo Genes (incomplete)         :: 27 of 54
            Pseudo Genes (internal stop)      :: 10 of 54
            Pseudo Genes (multiple problems)  :: 10 of 54
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..45519
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMD00233528-rid16434743.denovo.005"
                     /strain="K18-6-464"
                     /db_xref="taxon:1280"
                     /geo_loc_name="Japan: Niigata"
     gene            141..1400
                     /locus_tag="O7798_000238"
     CDS             141..1400
                     /locus_tag="O7798_000238"
                     /EC_number="2.5.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500841.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylglucosamine
                     1-carboxyvinyltransferase"
                     /protein_id="HDC2862518.1"
                     /translation="MAQEVIKIRGGRTLNGEVNISGAKNSAVAIIPATLLAQGHVKLE
                     GLPQISDVKTLVSLLEDLNIKASLNGTELEVDTTEIQNAALPNNKVESLRASYYMMGA
                     MLGRFKKCVIGLPGGCPLGPRPIDQHIKGFKALGAEIDESSTTSMKIEAKELKGAHIF
                     LDMVSVGATINIMLAAVYATGQTVIENAAKEPEVVDVANFLTSMGANIKGAGTSTIKI
                     NGVKELHGSEYQVIPDRIEAGTYMCIAAACGENVILNNIVPKHVETLTAKFSELGVNV
                     DVRDERIRINNNAPYQFVDIKTLVYPGFATDLQQPITPLLFMANGPSFVTDTIYPERF
                     KHVEELKRMGANIEVDEGTATIKPSTLHGAEVYASDLRAGACLIIAGLIAEGVTTIYN
                     VKHIYRGYTDIVEHLKALGADIWTETV"
     gene            1489..1824
                     /locus_tag="O7798_000239"
     CDS             1489..1824
                     /locus_tag="O7798_000239"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500840.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HDC2862519.1"
                     /translation="MEVCPYLEETFKILGRSWNGLIINYLSRCNDCSAHFSDMKRDLK
                     TITPRALSLKLSELAQWELVEKQIISTSPVQIIYVLTEKGKALAEALHPIEAWAQSYV
                     DLTDQRTAK"
     gene            2062..3489
                     /locus_tag="O7798_000240"
     CDS             2062..3489
                     /locus_tag="O7798_000240"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500839.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aldehyde dehydrogenase family protein"
                     /protein_id="HDC2862520.1"
                     /translation="MRDYTKQYINGEWVESNSNETIEVINPATEEVIGKVAKGNKADV
                     DKAVEAADDVYLEFRHTSVKERQALLDKIVKEYENRKDDIVQAITDELGAPLSLSERV
                     HYQMGLNHFVAARDALDNYEFEERRGDDLVVKEAIGVSGLITPWNFPTNQTSLKLAAA
                     FAAGSPVVLKPSEETPFAAVILAEIFDKVGVPKGVFNLVNGDGAGVGNPLSEHPKVRM
                     MSFTGSGPTGSKIMEKAAKDFKKVSLELGGKSPYIVLDDVDIKEAAKATTGKVVNNTG
                     QVCTAGTRVLVPNKIKDAFLAELKEQFSQVRVGNPREDGTQVGPIISKKQFDQVQNYI
                     NKGIEEGAELFYGGPGKPEGLEKGYFARPTIFINVDNQMTIAQEEIFGPVMSVITYND
                     LDEAIQIANDTKYGLAGYVIGKDKETLHKVARSIEAGTVEINEAGRKPDLPFGGYKQS
                     GLGREWGDYGIEEFLEVKSIAGYFK"
     gene            3736..5052
                     /gene="rho"
                     /locus_tag="O7798_000241"
     CDS             3736..5052
                     /gene="rho"
                     /locus_tag="O7798_000241"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500838.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcription termination factor Rho"
                     /protein_id="HDC2862521.1"
                     /translation="MPERERTSPQYESFHELYKNYTTKELTQKAKTLKLTNYSKLNKK
                     ELVLAIMEAQMEKDGNYYMEGILDDIQPDGYGFLRTVNYSKGEKDIYISASQIRRFEI
                     KRGDKVTGKVRKSKDNEKYYGLLQVDFVNDHNAEEVKKRPHFQALTPLYPDERIKLET
                     ETQNYSTRIMDLVTPIGLGQRGLIVAPPKAGKTSLLKEIANAISTNKPDAKLFILLVG
                     ERPEEVTDLERSVEAAEVVHSTFDEPPEHHVKVAELLLERAKRLVEIGEDVIILMDSI
                     TRLARAYNLVIPPSGRTLSGGLDPASLHKPKAFFGAARNIEAGGSLTILATALVDTGS
                     RMDDMIYEEFKGTGNMELHLDRKLSERRIFPAIDIGRSSTRKEELLISKSELDTLWQL
                     RNLFTDSTDFTERFIRKLKRSKNNEDFFKQLQKSAEESTKTGRPII"
     gene            5170..5424
                     /locus_tag="O7798_000242"
     CDS             5170..5424
                     /locus_tag="O7798_000242"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500837.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type B 50S ribosomal protein L31"
                     /protein_id="HDC2862522.1"
                     /translation="MKQGIHPEYHQVIFLDTTTNFKFLSGSTKTSSEMMEWEDGKEYP
                     VIRLDISSDSHPFYTGRQKFAAADGRVERFNKKFGLKSNN"
     gene            5771..6370
                     /locus_tag="O7798_000243"
     CDS             5771..6370
                     /locus_tag="O7798_000243"
                     /EC_number="2.7.1.21"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500836.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thymidine kinase"
                     /protein_id="HDC2862523.1"
                     /translation="MYETYHSGWIECITGSMFSGKSEELIRRLRRGIYAKQKVVVFKP
                     AIDDRYHKEKVVSHNGNAIEAINISKASEIMTHDLTNVDVIGIDEVQFFDDEIVSIVE
                     KLSADGHRVIVAGLDMDFRGEPFEPMPKLMAVSEQVTKLQAVCAVCGSSSSRTQRLIN
                     GKPAKIDDPIILVGANESYEPRCRAHHIVAPSDNNKEEL"
     gene            6371..7447
                     /gene="prfA"
                     /locus_tag="O7798_000244"
     CDS             6371..7447
                     /gene="prfA"
                     /locus_tag="O7798_000244"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015445905.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide chain release factor 1"
                     /protein_id="HDC2862524.1"
                     /translation="MFDQLDIVEERYEQLNELLSDPDVVNDSDKLRKYSKEQADLQKT
                     VDVYRNYKAKKEELADIEEMLSETDDKEEVEMLKEESNGIKAELPNLEEELKILLIPK
                     DPNDDKDVIVEIRAAAGGDEAAIFAGDLMRMYSKYAESQGFKTEIVEASESDHGGYKE
                     ISFSVSGNGAYSKLKFENGAHRVQRVPETESGGRIHTSTATVAVLPEVEDVEIEIRNE
                     DLKIDTYRSSGAGGQHVNTTDSAVRITHLPTGVIATSSEKSQIQNREKAMKVLKARLY
                     DMKVQEEQQKYASQRKSAVGTGDRSERIRTYNYPQSRVTDHRIGLTLQKLGQIMEGHL
                     EEIIDALTLSEQTDKLKELNNGEL"
     gene            7434..8270
                     /gene="prmC"
                     /locus_tag="O7798_000245"
     CDS             7434..8270
                     /gene="prmC"
                     /locus_tag="O7798_000245"
                     /EC_number="2.1.1.297"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000248725.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide chain release factor N(5)-glutamine
                     methyltransferase"
                     /protein_id="HDC2862525.1"
                     /translation="MVNYKEKLDEAIHLTQQKGFEQTRAEWLMLDVFQWTRTDFVVHM
                     HDDMPKAMIMKFDLALQRMLLGEPIQYIVGFASFYGRTFDVNSNCLIPRPETEEVMLH
                     FLQQLEDDATIVDIGTGSGVLAITLKCEKPDLNVIATDISLEAMNMARNNAEKHQSQI
                     QFLTGDALKPLINEGIKLNGLISNPPYIDEKDMVTMSPTVTRFEPHQALFADNHGYAI
                     YESIIEDLPHVMEKGSPVVFEIGYNQGEALKSIILNKFPDKKIDIIKDINGHDRIVSF
                     KW"
     gene            8354..9400
                     /locus_tag="O7798_000246"
     CDS             8354..9400
                     /locus_tag="O7798_000246"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006190783.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="threonylcarbamoyl-AMP synthase"
                     /protein_id="HDC2862526.1"
                     /translation="MDTKIWDVREYNEDLQQYPKINEIKDIVLNGGLIGLPTETVYGL
                     AANATDEEAVAKIYEAKGRPSDNPLIVHIHSKGQLKDFTYTLDPRVEKLMQAFWPGPI
                     SFILPLKLGYLCRKVSGGLSSVAVRMPSHSVGRQLLQIINEPLAAPSANLSGRPSPTT
                     FNHVYQDLNGRIDGIVQAEQSEEGLESTVLDCTSFPYKIARPGSITAAMITEILPNSI
                     AHADYNDTEQPIAPGMKYKHYSPNTPLTIITDIESKIGNDGKDWSSIAFIVPSNKVAF
                     IPSEAQFIQLCQDDNDVKQASHNLYDVLHSLDENENISAAYIYGFELNDNTEAIMNRM
                     LKAAGNHIIKGCEL"
     gene            9397..9816
                     /locus_tag="O7798_000247"
     CDS             9397..9816
                     /locus_tag="O7798_000247"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500832.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="low molecular weight protein arginine
                     phosphatase"
                     /protein_id="HDC2862527.1"
                     /translation="MKILFVCTGNTCRSPLVESIAKEVMPNHQFESRGIFAVNNQGVS
                     NYVEDLVEEHHLAETTLSQQFTEADLKADIILTMSYSHKELIEAHFGLQNHVFTLHEY
                     VKEAGEVIDPYGGTKEMYVHTYEELVSLILKLKDIIC"
     gene            9923..10447
                     /locus_tag="O7798_000248"
     CDS             9923..10447
                     /locus_tag="O7798_000248"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500831.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR01440 family protein"
                     /protein_id="HDC2862528.1"
                     /translation="MKDLTMLLDELKDMSFFNKGDICLIGCSTSEVIGEKIGTVGSME
                     VAETIFNALDVVSKETGVTFAFQGCEHINRAITIEKSQYNPLTMEEVSVVPDVHAGGS
                     LATYAFQHMKDPIVVEHITVPCGIDIGQTLIGMHIKHVCVPVRTSVKQVGQAIVTIAT
                     SRPKKIGGERAKYQ"
     gene            10474..11712
                     /locus_tag="O7798_000249"
     CDS             10474..11712
                     /locus_tag="O7798_000249"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500830.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine hydroxymethyltransferase"
                     /protein_id="HDC2862529.1"
                     /translation="MSYITKQDKVIAEAIEREFQRQNSNIELIASENFVSEAVMEAQG
                     SVLTNKYAEGYPGRRYYGGCEFVDVTESIAIDRAKALFGAEHVNVQPHSGSQANMAVY
                     LVALEMGDTVLGMNLSHGGHLTHGAPVNFSGKFYNFVEYGVDKDTERINYDEVRKLAL
                     EHKPKLIVAGASAYSRTIDFKKFKEIADEVNAKLMVDMAHIAGLVAAGLHPNPVEYAD
                     FVTTTTHKTLRGPRGGMILCKEEYKKDIDKTIFPGIQGGPLEHVIAAKAVAFGEALEN
                     NFKTYQQQVVKNAKVLAEALINEGFRIVSGGTDNHLVAVDVKGSIGLTGKEAEETLDS
                     VGITCNKNTIPFDQEKPFVTSGIRLGTPAATTRGFDEKAFEEVAKIISLALKNSKDEE
                     KLQQAKERVAKLTAEYPLYQ"
     gene            11740..12369
                     /gene="upp"
                     /locus_tag="O7798_000250"
     CDS             11740..12369
                     /gene="upp"
                     /locus_tag="O7798_000250"
                     /EC_number="2.4.2.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017636774.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="uracil phosphoribosyltransferase"
                     /protein_id="HDC2862530.1"
                     /translation="MSKVHVFDHPLIQHKLSYIRDVNTGTKEFRELVDEVGMLMAYEV
                     TRDLELQDVDIETPVTKMTAKRLAGKKLAIVPILRAGLGMTDGILSLVPAARVGHIGL
                     YRDPETLKAVEYFAKLPQDITERQIIVVDPMLATGASAIEAITSLKKRGAKNIRFMCL
                     IAAPEGVEKMHEAHPDVDIYIAALDEKLNDKAYITPGLGDAGDRLFGTK"
     gene            12393..13520
                     /gene="wecB"
                     /locus_tag="O7798_000251"
     CDS             12393..13520
                     /gene="wecB"
                     /locus_tag="O7798_000251"
                     /EC_number="5.1.3.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500828.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylglucosamine 2-epimerase
                     (non-hydrolyzing)"
                     /protein_id="HDC2862531.1"
                     /translation="MKKIMTIFGTRPEAIKMAPLVKALEQEKMLEPIVVVTAQHREML
                     DSVLSTFEIKPKYDLNIMKSGQTLSEITSKSITQLEQVIQLEKPDMVLVHGDTMTTFA
                     GGLAAFYNQVPIGHVEAGLRSYDKYSPFPEEVNRQLVGVLADLHFAPTKNAASHLLSE
                     GKYSESVVVTGNTAIDAMKYTVDDNYKSNIMDKYHDKKFILMTAHRRENIGKPMENIF
                     KAVRRLIDEYTDLALVYPMHKNPKVREVAQKILGSHDRIELIEPLDVVDFHNFAKKSY
                     FILTDSGGIQEEAPSFNKPVLVLRSVTERPEGVEAGTLKVIGTNKQNVYQAAKELIDD
                     ERLYHQMSEASNPYGDGFASERIVNHIKYYLNLITEKPSDF"
     gene            13588..14040
                     /locus_tag="O7798_000252"
     CDS             13588..14040
                     /locus_tag="O7798_000252"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500827.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP synthase subunit I"
                     /protein_id="HDC2862532.1"
                     /translation="MNRIDTTNRLYYHLVCMSGTVFMIDISHTEAYKMSRFYNIFKQF
                     IQYYFYLIIILGGLYLYTHHAFILGLIIGVTGSAINTCIFECYLAKAKRPDTMHISTG
                     NMWRYLVAIIACMIWYLNKAHVSIIGIIIGLMISYVVVIIRPLLKVSK"
     gene            14061..14789
                     /gene="atpB"
                     /locus_tag="O7798_000253"
     CDS             14061..14789
                     /gene="atpB"
                     /locus_tag="O7798_000253"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500826.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit A"
                     /protein_id="HDC2862533.1"
                     /translation="MDHKSPLVSWNLFGFDIVFNLSSILMILVTAFLVFLLAIICTRN
                     LKKRPTGKQNFVEWIFDFVRGIIEGNMAWKKGGQFHFLAVTLILYIFIANMLGLPFSI
                     VTKDHTLWWKSPTADATVTLTLSTTIILLTHFYGIKMRGTKQYLKGYVQPFWPLAIIN
                     VFEEFTSTLTLGLRLYGNIFAGEILLTLLAGLFFNEPAWGWIISIPGLIVWQAFSIFV
                     GTIQAYIFIMLSMVYMSHKVADEH"
     gene            14832..15044
                     /gene="atpE"
                     /locus_tag="O7798_000254"
     CDS             14832..15044
                     /gene="atpE"
                     /locus_tag="O7798_000254"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500825.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit C"
                     /protein_id="HDC2862534.1"
                     /translation="MNLIAAAIAIGLSALGAGIGNGLIVSRTVEGVARQPEARGQLMG
                     IMFIGVGLVEALPIIGVVIAFMTFAG"
     gene            15242..15763
                     /locus_tag="O7798_000255"
     CDS             15242..15763
                     /locus_tag="O7798_000255"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500824.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit B"
                     /protein_id="HDC2862535.1"
                     /translation="MTETANLFVLGAAGGVEWGTVIVQVLTFIVLLALLKKFAWGPLK
                     DVMDKRERDINRDIDDAEQAKLNAQKLEEENKQKLKETQEEVQKILEDAKVQARQQQE
                     QIIHEANVRANGMIETAQSEINSQKERAIADINNQVSELSVLIASKVLRKEISEQDQK
                     ALVDKYLKEAGDK"
     gene            15763..16302
                     /locus_tag="O7798_000256"
     CDS             15763..16302
                     /locus_tag="O7798_000256"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500823.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit delta"
                     /protein_id="HDC2862536.1"
                     /translation="MVKVANKYAKALFDVSLDTNNLETINEELTVINEAVKDKIEQLR
                     MVDSNPTQTAEQRRELINGVFTDINPYIKNMMYVLADNRHISLIADVFKAFQSLYNGH
                     YNQDFATIESTYELSQEELDKIVKLVTQQTKLSKVIVDTKINPDLIGGFRVKVGTTVL
                     DGSVRNDLVQLQRKFRRVN"
     gene            16324..17832
                     /locus_tag="O7798_000257"
     CDS             16324..17832
                     /locus_tag="O7798_000257"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500822.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit alpha"
                     /protein_id="HDC2862537.1"
                     /translation="MAIKAEEISALLRSQIENYESEMSVTDVGTVLQIGDGIALIHGL
                     NDVMAGELVEFHNGVLGLAQNLEESNVGVVILGPYTGITEGDEVKRTGRIMEVPVGEE
                     LIGRVVNPLGQPIDGQGPINTTKTRPVEKKATGVMDRKSVDEPLQTGIKAIDALVPIG
                     RGQRELIIGDRQTGKTTIAIDTILNQKDQGTICIYVAIGQKDSTVRANVEKLRQAGAL
                     DYTIVVAASASEPSPLLYIAPYSGVTMGEEFMFNGKHVLIVYDDLTKQAAAYRELSLL
                     LRRPPGREAYPGDVFYLHSRLLERAAKLNDDLGGGSITALPIIETQAGDISAYVPTNV
                     ISITDGQIFLQSDLFFSGVRPAINAGQSVSRVGGSAQIKAMKKVAGTLRLDLASYREL
                     ESFAQFGSDLDEFTASKLERGKRTVEVLKQDQNKPLPVEHQVLIIYALTKGYLDDIPV
                     VDITRFEDELNHWAESNATELLNEIRETGGLPDAEKFDTAINEFKKSFSKSE"
     gene            17863..18729
                     /locus_tag="O7798_000258"
     CDS             17863..18729
                     /locus_tag="O7798_000258"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500821.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit gamma"
                     /protein_id="HDC2862538.1"
                     /translation="MASLKEIDTRIKSTKKMKQITKAMNMVSSSKLRRAEKNTKQFTP
                     YMDKMQDAITAVAGASSNTNHPMLRPRKITRSGYLVITSDKGLAGAYSANVLKKLITD
                     IEAKHQDSSEYSIVVLGQQGVDFLKNRGYDIEYSQVDVPDQPSFKSVQALANHAIDLY
                     SEEEIDELNIYYSHYVSVLENKPTSRQVLPLSQEDSSKGHGHLSSYEFEPDKESILSV
                     ILPQYVESLIYGTILDAKASEHATRMTAMKNATDNATELIDDLSLEYNRARQAEITQQ
                     ITEIVGGSAALE"
     gene            18751..20163
                     /gene="atpD"
                     /locus_tag="O7798_000259"
     CDS             18751..20163
                     /gene="atpD"
                     /locus_tag="O7798_000259"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017636767.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit beta"
                     /protein_id="HDC2862539.1"
                     /translation="MGIGRVTQVMGPVIDVRFEHNEVPKINNALVIDVPKEEGTIQLT
                     LEVALQLGDDVVRTIAMDSTDGVQRGMDVKDTGKEISVPVGDETLGRVFNVLGETIDL
                     KEEISDSVRRDPIHRQAPAFDELSTEVQILETGIKVVDLLAPYIKGGKIGLFGGAGVG
                     KTVLIQELINNIAQEHGGISVFAGVGERTREGNDLYFEMSDSGVIKKTAMVFGQMNEP
                     PGARMRVALSGLTMAEYFRDEQGQDVLLFIDNIFRFTQAGSEVSALLGRMPSAVGYQP
                     TLATEMGQLQERITSTTKGSVTSIQAVFVPADDYTDPAPATAFAHLDATTNLERKLTE
                     MGIYPAVDPLASTSRALEPSIVGQEHYEVARDVQSTLQKYRELQDIIAILGMDELSDE
                     DKQTVERARRIQFFLSQNFHVAEQFTGQKGSYVPVKTTVANFKDILDGKYDHIPEDAF
                     RLVGSMDDVIAKAKDMGVEV"
     gene            20183..20587
                     /locus_tag="O7798_000260"
     CDS             20183..20587
                     /locus_tag="O7798_000260"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500819.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit epsilon"
                     /protein_id="HDC2862540.1"
                     /translation="MNTLNLDIVTPNGSVYNRDNVELVVMQTTAGEIGVMSGHIPTVA
                     ALKTGFVKVKFHDGTEYIAVSDGFVEVRKDKVSIIVQTAETAREIDVERAKLAKARAE
                     SHLENDDDNTDIHRAERALERANNRLRVAELK"
     gene            20925..21017
                     /locus_tag="O7798_000261"
     CDS             20925..21017
                     /locus_tag="O7798_000261"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500818.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDC2862541.1"
                     /translation="MLKSKFPSPLSTVDISFFEIIYIFSYQDIL"
     gene            21149..21382
                     /locus_tag="O7798_000262"
     CDS             21149..21382
                     /locus_tag="O7798_000262"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500817.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1146 domain-containing protein"
                     /protein_id="HDC2862542.1"
                     /translation="MDYIGQYAVIHLVLHVVCICIAYWALQSIRLDQFFKKGYATQLQ
                     VCMIFVAILLGTAVSNFIVDLLQYSTQVKYLIK"
     gene            21493..22758
                     /gene="murA"
                     /locus_tag="O7798_000263"
     CDS             21493..22758
                     /gene="murA"
                     /locus_tag="O7798_000263"
                     /EC_number="2.5.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500816.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylglucosamine
                     1-carboxyvinyltransferase"
                     /protein_id="HDC2862543.1"
                     /translation="MDKIVIKGGNKLTGEVKVEGAKNAVLPILTASLLASDKPSKLVN
                     VPALSDVETINNVLTTLNADVTYKKDENAVVVDATKTLNEEAPYEYVSKMRASILVMG
                     PLLARLGHAIVALPGGCAIGSRPIEQHIKGFEALGAEIHLENGNIYANAKDGLKGTSI
                     HLDFPSVGATQNIIMAASLAKGKTLIENAAKEPEIVDLANYINEMGGRITGAGTDTIT
                     INGVESLHGVEHAIIPDRIEAGTLLIAGAITRGDIFVRGAIKEHMASLVYKLEEMGVE
                     LDYQEDGIRVRAEGELQPVDIKTLPHPGFPTDMQSQMMALLLTANGHKVVTETVFENR
                     FMHVAEFKRMNANINVEGRSAKLEGKSQLQGAQVKATDLRAAAALILAGLVADGKTSV
                     TELTHLDRGYVDLHGKLKQLGADIERIND"
     gene            22792..23232
                     /gene="fabZ"
                     /locus_tag="O7798_000264"
     CDS             22792..23232
                     /gene="fabZ"
                     /locus_tag="O7798_000264"
                     /EC_number="4.2.1.59"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500815.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-hydroxyacyl-ACP dehydratase FabZ"
                     /protein_id="HDC2862544.1"
                     /translation="METIFDYNQIKQIIPHRQPFLLIDKVVEYEEGQRCVAIKQVSGN
                     EPFFQGHFPEYAVMPGVLITEALAQTGAVAILNSEENKGKIALFAGIDKCRFKRQVVP
                     GDTLTLEVEITKIKGPIGKGNAKATVDGQLACSCELTFAIQDVK"
     gene            complement(23292..23732)
                     /locus_tag="O7798_000265"
     CDS             complement(23292..23732)
                     /locus_tag="O7798_000265"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000846746.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YwpF-like family protein"
                     /protein_id="HDC2862545.1"
                     /translation="MKTFKAVRFQIVNEHGRIIEYELEDGVIINKEESGTGWLLEIVI
                     SNEHYETFKEYQDNEQLLDIRVVITRPANDPALFESTVKSIKNFKTTMSIVFECHIYT
                     LRQQYAESLLEQLIDDGLSGEELKKSFNRMMQSKPKLKDEKLEE"
     gene            23926..24321
                     /locus_tag="O7798_000266"
     CDS             23926..24321
                     /locus_tag="O7798_000266"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500813.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="single-stranded DNA-binding protein"
                     /protein_id="HDC2862546.1"
                     /translation="MLNKIVIVGRLTKDAQIFEKEDRKIATFCVATHRNYKDENGEIV
                     CDYLFCKAFGKLASNIEKYTNQGTLVGITGQMRSRKYDKDGQTHFVTELYVETIKFMS
                     PKSQNNEILSDSILDIDSQNIDNHDLLEI"
     gene            24710..25405
                     /gene="sceD"
                     /locus_tag="O7798_000267"
     CDS             24710..25405
                     /gene="sceD"
                     /locus_tag="O7798_000267"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500812.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lytic transglycosylase SceD"
                     /protein_id="HDC2862547.1"
                     /translation="MKKTLLASSLAVGLGIVAGNAGHEAHASEADLNKASLAQMAQSN
                     DQTLNQKPIEAGAYNYTFDYEGFTYHFESDGTHFAWNYHATGTNGADMSAQAPATNNV
                     APSAVQANQVQSQEVEAPQNAQTQQPQASTSNNSQVTATPTESKSSEGSSVNVNAHLK
                     QIAQRESGGNIHAVNPTSGAAGKYQFLQSTWDSVAPAKYKGVSPANAPESVQDAAAVK
                     LYNTGGAGHWVTA"
     regulatory      25609..25711
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00059"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="TPP riboswitch; Derived by automated computational
                     analysis using gene prediction method: cmsearch."
                     /bound_moiety="thiamine pyrophosphate"
                     /db_xref="RFAM:RF00059"
     gene            25791..26480
                     /gene="tenA"
                     /locus_tag="O7798_000268"
     CDS             25791..26480
                     /gene="tenA"
                     /locus_tag="O7798_000268"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500810.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiaminase II"
                     /protein_id="HDC2862548.1"
                     /translation="MEFSQKLYQAAKPIINDIYEDDFIQKMLSGDIGADALRHYLKAD
                     AAYLKEFTNLYALLIPKMNSMNDVKFLVEQIEFMVEGEVLAHDILAQIVGESYEEIIK
                     TKVWPPSGDHYIKHMYFQAHSRENAIYTIAAMAPCPYIYAELAKRSQSDHKLNREKDT
                     AKWFDFYSTEMDDIINVFEALMNKLAESMSDKELEQVKQVFLESCIHERRFFNMAMTL
                     EQWEFGGKVND"
     gene            26473..27303
                     /gene="thiD"
                     /locus_tag="O7798_000269"
     CDS             26473..27303
                     /gene="thiD"
                     /locus_tag="O7798_000269"
                     /EC_number="2.7.1.49"
                     /EC_number="2.7.4.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500809.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional hydroxymethylpyrimidine
                     kinase/phosphomethylpyrimidine kinase"
                     /protein_id="HDC2862549.1"
                     /translation="MIKPKIALTIAGTDPTGGAGVMADLKSFHSCGVYGMGVVTSIVA
                     QNTLGVQHIHNLNHQWVDEQLDSVFNDTLPHAIKTGMIATADTMETIRHYLMQHESIP
                     YVIDPVMLAKSGDSLMDNDTKQNLQHTLLPLADVVTPNLPEAEEITGLTIDSEEKIMQ
                     AGRIFINEIGSKGVIIKGGHSNDTDIAKDYLFTNEGVQTFENERFKTKHTHGTGCTFS
                     AVITAELAKGRPLFEAVHKAKKFISMSIQYTPEIGRGRGPVNHFAYLKKEGLDDELSK
                     "
     gene            27287..28078
                     /gene="thiM"
                     /locus_tag="O7798_000270"
     CDS             27287..28078
                     /gene="thiM"
                     /locus_tag="O7798_000270"
                     /EC_number="2.7.1.50"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500808.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydroxyethylthiazole kinase"
                     /protein_id="HDC2862550.1"
                     /translation="MNYLNKIRIENPLTICYTNDVVKNFTANGLLSIGASPAMSEAPE
                     EAEEFYKVAQALLINIGTLTAENEQDIIAIAQTANEAGLPIVFDPVAVGASTYRKQFC
                     KLLLKSAKVSVIKGNASEILALIDDTATMKGTDSDANLDAVAIAKKAYATYKTAIVIT
                     GKEDVIVQDNKAFVLANGSPLLARVTGAGCLLGGVIAGFLFRETEPDIEALIEAVSVF
                     NIAAEVAAENENCGGPGTFSPLLLDTLYHLNETTYQQRIRIQEVE"
     gene            28080..28721
                     /locus_tag="O7798_000271"
     CDS             28080..28721
                     /locus_tag="O7798_000271"
                     /EC_number="2.5.1.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500807.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine phosphate synthase"
                     /protein_id="HDC2862551.1"
                     /translation="MFNQSYLNVYFICGTSDVPSHRTIHEVLEAALKAGITLFQFREK
                     GESALKGNDKLVLAKELQHLCHQYDVPFIVNDDVSLAKEINADGIHVGQDDAKVKEIA
                     QYFTDKIIGLSISDLDEYAKSDLTHVDYIGVGPIYPTPSKHDAHIPVGPEMIATFKEM
                     NPQLPIVAIGGINTNNVAPIVEAGANGISVISAISKSENIEKTVNRFKDFFNN"
     gene            28807..29679
                     /gene="yidC"
                     /locus_tag="O7798_000272"
     CDS             28807..29679
                     /gene="yidC"
                     /locus_tag="O7798_000272"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500806.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="membrane protein insertase YidC"
                     /protein_id="HDC2862552.1"
                     /translation="MKKKALLPLFLGIMVFLAGCDYSKPEKRSGFFYNTFVDPMKNVL
                     DWLGNNLLNDNYGLAIIILVLVIRIILLPFMLSNYKNSHMMRQKMKVAKPEVEKIQEK
                     VKRARTQEEKMAANQELMQVYKKYDMNPIKSMLGCLPMLIQLPIIMGLYFVLKDQLVD
                     GLFKYPHFLWFDLGRPDIWITIIAGVLYFIQAYVSSKTMPDEQRQMGYMMMVISPIMI
                     IWISLSSASALGLYWSVSAAFLVVQTHFANIYYEKVAKKEVQPFIEAYEREHNGGSNK
                     KGKNTQVVSKKKKK"
     gene            complement(30492..31139)
                     /locus_tag="O7798_000273"
     CDS             complement(30492..31139)
                     /locus_tag="O7798_000273"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500803.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HD domain-containing protein"
                     /protein_id="HDC2862553.1"
                     /translation="MQQSDVISAAKKYMESIHQNDYTGHDIAHVYRVTALAKSIAENE
                     GVNDTLVIELACLLHDTVDEKVVDANKQYVELKSFLSSLSLSTEDQEHILFIINNMSY
                     RNGKNDHVTLSLEGQIVRDADRLDAIGAIGVARTFQFAGHFGEPMWTEHMSLDKINDD
                     LVEQLPPSAIKHFFEKLLKLESLMHTDTAKMIAKERHDFMMMYLKQFFTEWNCHD"
     gene            complement(31167..32651)
                     /gene="cls"
                     /locus_tag="O7798_000274"
     CDS             complement(31167..32651)
                     /gene="cls"
                     /locus_tag="O7798_000274"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500802.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cardiolipin synthase"
                     /protein_id="HDC2862554.1"
                     /translation="MIELLSIALKHSNIILNSIFIGAFILNLLFAFTIIFMERRSANS
                     IWAWLLVLVFLPLFGFILYLLLGRQIQRDQIFKIDKEDKKGLELIVDEQLAALKNENF
                     SNSNYQIVKFKEMIQMLLYNNAAFLTTDNDLKIYTDGQEKFDDLIQDIRNATDYIHFQ
                     YYIIQNDELGRTILNELGKKAEQGVEVKILYDDMGSRGLRKKGLRPFRNKGGHAEAFF
                     PSKLPLINLRMNNRNHRKIVVIDGQIGYVGGFNVGDEYLGKSKKFGYWRDTHLRIVGD
                     AVNALQLRFILDWNSQATRDHISYDDRYFPDVNSGGTIGVQIASSGPDEEWEQIKYGY
                     LKMISSAKKSIYIQSPYFIPDQAFLDSIKIAALGGVDVNIMIPNKPDHPFVFWATLKN
                     AASLLDAGVKVFHYDNGFLHSKTLVIDDEIASVGTANMDHRSFTLNFEVNAFIYDQQI
                     AKKLKQAFIDDLAVSSELTKARYAKRSLWIKFKEGISQLLSPIL"
     gene            32817..33110
                     /gene="csoR"
                     /locus_tag="O7798_000275"
     CDS             32817..33110
                     /gene="csoR"
                     /locus_tag="O7798_000275"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500801.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="copper-sensing transcriptional repressor CsoR"
                     /protein_id="HDC2862555.1"
                     /translation="MTEQDNAHHSEQIKTNLKSRLNRIEGQVRAINRMIEEDVYCDDV
                     LTQIRATRSALNSVAIKLLEQHMKSCIMNKVNQGAQEEAMEELLVTFQKLIKD"
     gene            33122..33331
                     /locus_tag="O7798_000276"
     CDS             33122..33331
                     /locus_tag="O7798_000276"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500800.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heavy-metal-associated domain-containing
                     protein"
                     /protein_id="HDC2862556.1"
                     /translation="MIHQNTIYTAGIETEEQVSQLTERISNMIGVHQVNINIIDGQVT
                     VSYETPANLNSIEKEIYDEGYKIVF"
     gene            33459..33596
                     /locus_tag="O7798_000277"
     CDS             33459..33596
                     /locus_tag="O7798_000277"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500799.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDC2862557.1"
                     /translation="MKRPEKIQNVVKLLSSLGVNIKKTKSRLDIINTLPASNKVSHEL
                     K"
     gene            complement(33860..35062)
                     /locus_tag="O7798_000278"
     CDS             complement(33860..35062)
                     /locus_tag="O7798_000278"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500798.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rod shape-determining protein RodA"
                     /protein_id="HDC2862558.1"
                     /translation="MNYSSRQQPDKHWLRKVDWVLVATIAVLAIFSVLLINSAMGGGQ
                     YSANFGIRQIFYYILGAIFAGIIMFISPKKIKHYTYLLYFLICLLLIGLLVIPESPIT
                     PIINGAKSWYTFGPISIQPSEFMKIILILALARVVSRHNQFTFNKSFQSDLLLFFKII
                     GVSLVPSILILLQNDLGTTLVLAAIIAGVMLVSGITWRILAPIFITGIVGAMTVILGI
                     LYAPALIENLLGVQLYQMGRINSWLDPYTYSSGDGYHLTESLKAIGSGQLLGKGYNHG
                     EVYIPENHTDFIFSVIGEELGFIGSVILILIFLFLIFHLIRLAAKIEDQFNKIFIVGF
                     VTLLVFHILQNIGMTIQLLPITGIPLPFISYGGSALWSMMTGIGIVLSIYYHEPKRYV
                     DLYHPKSN"
     gene            35380..36450
                     /locus_tag="O7798_000279"
     CDS             35380..36450
                     /locus_tag="O7798_000279"
                     /EC_number="6.3.2.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500797.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-alanine--D-alanine ligase"
                     /protein_id="HDC2862559.1"
                     /translation="MTKENICIVFGGKSAEHEVSILTAQNVLNAIDKDKYHVDIIYIT
                     NDGDWRKQNNITAEIKSTDELHLENGEALEISQLLKESSSGQPYDAVFPLLHGPNGED
                     GTIQGLFEVLDVPYVGNGVLSAASSMDKLVMKQLFEHRGLPQLPYISFLRSEYEKYEH
                     NILKLVNDKLNYPVFVKPANLGSSVGISKCNNEAELKEGIKEAFQFDRKLVIEQGVNA
                     REIEVAVLGNDYPEATWPGEVVKDVAFYDYKSKYKDGKVQLQIPADLDEDVQLTLRNM
                     ALEAFKATDCSGLVRADFFVTEDNQIYINETNAMPGFTAFSMYPKLWENMGLSYPELI
                     TKLIELAKERHQDKQKNKYKID"
     gene            36465..37823
                     /locus_tag="O7798_000280"
     CDS             36465..37823
                     /locus_tag="O7798_000280"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500796.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-
                     alanine ligase"
                     /protein_id="HDC2862560.1"
                     /translation="MINVTLKQIQSWIPCEIEDQFLNQEINGVTIDSRAISKNMLFIP
                     FKGENVDGHRFVSKALQDGAGAAFYQRGTPIDENVSGPIIWVEDTLTALQQLAQAYLR
                     HVNPKVIAVTGSNGKTTTKDMIESVLHTEFKVKKTQGNYNNEIGLPLTILELDNDTEI
                     SILEMGMSGFHEIEFLSNLAQPDIAVITNIGESHMQDLGSREGIAKAKSEITIGLKDN
                     GTFIYDGDEPLLKPHVKEVENAKCISIGVATDNALVCSVDDRDTTGISFTINNKEHYD
                     LPILGKHNMKNATIAIAVGHELGLTYNTIYQNLKNVSLTGMRMEQHTLENDITVINDA
                     YNASPTSMRAAIDTLSTLTGRRILILGDVLELGENSKEMHIGVGNYLEEKHIDVLYTF
                     GNEAKYIYDSGQQHVEKAQHFNSKDDMIEVLINDLKAHDRVLVKGSRGMKLEEVVNAL
                     IS"
     gene            38340..39860
                     /locus_tag="O7798_000281"
     CDS             38340..39860
                     /locus_tag="O7798_000281"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500795.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DEAD/DEAH box helicase"
                     /protein_id="HDC2862561.1"
                     /translation="MQNFKELGISDNTVQSLESMGFKEPTPIQKDSIPYALQGIDILG
                     QAQTGTGKTGAFGIPLIEKVVGKQGVQSLILAPTRELAMQVAEQLREFSRGQGVQVVT
                     VFGGMPIERQIKALKKGPQIVVGTPGRVIDHLNRRTLKTDGIHTLILDEADEMMNMGF
                     IDDMRFIMDKIPAVQRQTMLFSATMPKAIQALVQQFMKSPKIIKTMNNEMSDPQIEEF
                     YTIVKELEKFDTFTNFLDVHQPELAIVFGRTKRRVDELTSALISKGYKAEGLHGDITQ
                     AKRLEVLKKFKNDQINILVATDVAARGLDISGVSHVYNFDIPQDTESYTHRIGRTGRA
                     GKEGIAVTFVNPIEMDYIRQIEDANGRKMSALRPPHRKEVLQAREDDIKEKVENWMSK
                     ESESRLKRISTELLNEYNDVDLVAALLQELVEANDEVEVQLTFEKPLSRKGRNGKPSG
                     SRNRNSKRGNPKFDSKSKRSKGYSSKKKSTKKFDRKEKSSGGSRPMKGRTFADHQK"
     gene            complement(40229..40924)
                     /locus_tag="O7798_000282"
     CDS             complement(40229..40924)
                     /locus_tag="O7798_000282"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500794.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HDC2862562.1"
                     /translation="MQSKILIIEDDHAITHLLDVALTLDYYNVTTADNATQAHFKIQI
                     DKPDVILLDLGLPDKDGLCLISEIRQHTDIPIIVISARQEEQTIIQALDNGANDYMTK
                     PFNVDELRARIRVIERIAKSHQETNIVFTNGLLSIDFGSKSVVINNQEVHLTPNEFSL
                     LELLSNHKGKVLTYEMILKRIYGYVNKTEMPSLRVHMTSLRQKLSQCHEDAKDIIKTH
                     PRIGYQMLQWKEK"
     gene            complement(40924..43581)
                     /locus_tag="O7798_000283"
     CDS             complement(40924..43581)
                     /locus_tag="O7798_000283"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500793.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sensor histidine kinase KdpD"
                     /protein_id="HDC2862563.1"
                     /translation="MSNTESLNIGKKRGSLTIYIGYSPGVGKTFEMLSNAIELFQSNV
                     DIKIGYIEPHQRDETNALAEQLPKITTNFTKHGSHHFQYLDVDRIIEESPTIVLIDEL
                     AHTNISRDRHEKRYMDIEEILNHGIDVHTTLNIQHIESLSSQIELMTGVHVKERVPDY
                     FIMSADVLEVVDISPEQLIKRLKAGKVYKKDRLDVAFSNFFTYAHLSELRTLTLRTVA
                     DLMSDKEKVRHNHKTSLKPHIAVAISGSIYNEAVIKEAFHIAQKEHAKFTAIYIDVFE
                     KNRQYKDSQKQVHQHLMLAKSLGAKVKVVYSQTVALGLDEWCKNQDVTKLIIGQHIRN
                     KWRDFFNTPLIDHLMSFEHSYKIEIVPIKQIPVELKMNKSPYRPKGKRFAIDMLKMIL
                     IQIICVMMGLWIYQLDKHESSTIILMIFLIGIILLSIWTRSFIIGFLAAIINVFVFNY
                     FFTEPRYTFEVYRFDYPITFIVSILTSILTSALLKQIKFQYSITKKQLYRTDLLFQFN
                     DSIKQTYTVENLLINAGYQINQLLQQSITIYVINQSKVIKTIPLQNHIDNTTQQHEQA
                     LSWVIKNERQAGATTDTFPGINKWLIPIGTSPIKGILAIDYQSSQVINPYDASILESM
                     LNELSLAVENVTLLKQTRESMLQAERQLTHSNFLRSISHDIRTPLTTIMGNLDILVSH
                     SKDMSIIEKEQLLVHSFQESQYLYLLVTNILSLTKLQSSNVQIKLQPYLVSELVEEID
                     MILERRHLKKRITVSSSVNLQFIHIDSKLILQALFNLIENAVKHTSTDTKINLSIRYA
                     SYEQIEFAVIDEGPGISLEEQQKIFEPFYTGSNKYFKDNQKESMGLGLYLVQTILHKH
                     QSNLQYKPNQPHGSIFYFNIYTDFNEGDV"
     gene            43719..43829
                     /gene="kdpF"
                     /locus_tag="O7798_000284"
     CDS             43719..43829
                     /gene="kdpF"
                     /locus_tag="O7798_000284"
                     /EC_number="7.2.2.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500792.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="K(+)-transporting ATPase subunit F"
                     /protein_id="HDC2862564.1"
                     /translation="MLLCCKEVMAMLIVLLLVVIALVLYLFYALIRSEKF"
     gene            43853..>45519
                     /gene="kdpA"
                     /locus_tag="O7798_000285"
     CDS             43853..>45519
                     /gene="kdpA"
                     /locus_tag="O7798_000285"
                     /EC_number="7.2.2.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500791.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="potassium-transporting ATPase subunit A"
                     /protein_id="HDC2862565.1"
                     /translation="MEIILFLTMMVMITYVFSGYLYRVALVQSSRVDLIFTRFENMCF
                     KIIGTDLEHMSAKTYVKHFLAFNGFMGFITFVLLIVQQWLFLNPNHNLNQSIDLAFNT
                     AISFLTNSNLQHYNGESDVTYLTQMIVMTYLMFTSSASGYAVCIAMLRRLTGLTNIIG
                     NFYQDIVRFIVRVLLPLSCLISILLMTQGVPQTLHANLMIRTLSGHIQHIAFGPIASL
                     ESIKHLGTNGGGFLAGNSATPFENPNIWSNFIEMGSMMLLPMSMLFLFGRMLSRHGKR
                     VHRHALILFVAMFFIFIAILTLTMWSEYRGNPILANLGIYGPNMEGKEVRFGAGLSAL
                     FTVITTAFTTGSVNNMHDSLTPIGGLGPMVLMMLNVVFGGEGVGLMNLLIFVLLTVFI
                     CSLMVGKTPEYLNMPIGAREMKCIVLVFLIHPILILVFSALAFMIPGASESITNPSFH
                     GISQVMYEMTSAAANNGSGFEGLKDDTTFWNISTGIIMLLSRYIPIILQLMIASSLVN
                     KKSYHQDKYTIAIDKPYFGVSLIVFIVLLSGLTFIPVLLLGPIGEFLT"
BASE COUNT        15995 a         6801 c         8588 g        14135 t
ORIGIN      
        1 tgatttgtta ttaatcaatc gaaaatagaa agacaagatt ttaacgatta aaataaacta
       61 ttttacaaat aaagtaaaat taatttataa tgctaataat gcaaaaaatt aaaaagtaat
      121 ggacaaagga gataaatgat atggctcaag aggtaataaa aataagaggt ggacgcacac
      181 taaatgggga agttaatatc agtggcgcga aaaacagtgc tgtagctatc attcctgcaa
      241 cattattagc tcaaggacat gtgaaattag aagggttacc gcaaatctct gatgttaaaa
      301 ctttagtgag tttattagaa gatttaaata ttaaggcatc actaaatggt acggaattag
      361 aagttgatac aactgaaata caaaatgctg cattaccaaa taataaagtt gaatcattac
      421 gtgcttcata ctatatgatg ggtgccatgt taggtagatt taaaaaatgt gtgattggtt
      481 taccgggagg atgtccactt gggccacgtc caattgatca acatattaaa ggatttaaag
      541 ctttaggtgc tgaaattgat gaatcaagta cgacatcaat gaaaatcgaa gctaaagagt
      601 taaaaggtgc acatattttt ctagatatgg ttagcgtagg tgcaacaatt aacattatgc
      661 tagctgcagt ttatgcaaca ggacaaactg taattgaaaa tgctgctaaa gaaccggaag
      721 tagttgatgt tgctaacttc ttaacaagta tgggagctaa tattaaggga gcgggtacat
      781 caacaattaa aatcaatggc gtcaaagaat tacatggttc tgagtatcaa gttatacctg
      841 atagaattga agcaggcaca tatatgtgta tcgctgcagc atgtggagaa aatgttatat
      901 taaataatat tgttccgaaa catgtagaaa cattaactgc taaatttagt gaattaggtg
      961 tgaatgttga tgtaagagac gaaagaattc gcatcaataa taatgcgcca tatcaatttg
     1021 ttgatattaa aacactagta tatccaggtt ttgctactga tttgcaacag cctattacac
     1081 cattattatt tatggcaaat ggtccttcat ttgtaactga tacgatttat ccggagcgtt
     1141 ttaaacatgt tgaagaatta aagcgcatgg gtgcaaatat tgaagttgac gaaggcacag
     1201 caacgataaa accatcaaca ttacatggtg ctgaagttta tgctagcgat ttaagagcag
     1261 gagcttgttt aattattgct ggtttaattg ctgagggtgt aactacaatt tacaatgtta
     1321 aacatattta tagaggttat acagatattg tagaacactt aaaagcttta ggtgcagata
     1381 tttggacgga aactgtatag atttatcttg ttttgtggta taataattat actgattaaa
     1441 aaatggtgtt cgtttacatt ctaaatttat tgatgagagg tgaagatgat ggaagtatgt
     1501 ccgtatctcg aagaaacttt taaaatactt ggtagaagtt ggaatggatt aatcattaat
     1561 tatctctcaa gatgtaatga ctgttcagca cacttttccg atatgaaaag agatttgaaa
     1621 acaataacac cacgtgcttt aagtcttaag ttgtcagagc ttgcacaatg ggagttagtt
     1681 gagaagcaaa tcatttctac gagtccagta caaattattt atgtgctaac tgaaaaaggt
     1741 aaagcgttag cagaggcttt acatccaatt gaagcatggg cgcaatcata tgtcgattta
     1801 acagatcaac gtactgctaa ataattacat gacgtttaaa catagcattg attataacta
     1861 tttctaagtc ttcgcattat ttgcgatgat gtgggaatag ttatttttat ttaaaaatat
     1921 aaaaaaatag atgcagcaaa attttaaagc attttatttt gaacatatta aaagggagcg
     1981 tatcataatg gaatgtaatg tttatatcgt atgcattacg gataaataat atataaatca
     2041 ttcttgagga gtgaaagaat aatgagagac tacacaaagc aatacattaa tggcgaatgg
     2101 gtagaaagta atagtaatga aacgatagaa gttataaatc cagcaaccga agaagtaatc
     2161 gggaaagttg ctaaaggtaa taaagctgat gttgataaag ccgtcgaggc ggcagacgat
     2221 gtttatttag agttccgtca tacatctgtg aaagaaagac aagcgttatt agataaaatt
     2281 gtaaaagaat atgaaaacag aaaagacgat attgtacaag ctattacgga tgaattaggt
     2341 gctcctttat cattatctga gcgtgtccat tatcaaatgg gactaaacca ttttgttgca
     2401 gcgagagacg cattagataa ctacgaattt gaagaacgcc gcggagatga tttagttgtt
     2461 aaagaagcaa tcggtgtatc tggattaatt acaccgtgga acttccctac aaaccaaaca
     2521 tcattaaaat tagcagcagc atttgcggct ggtagtccag ttgtacttaa accatctgaa
     2581 gaaacaccat ttgcagctgt tattttagct gagatttttg ataaagtcgg tgttcctaaa
     2641 ggtgtattta accttgttaa tggtgatggt gctggtgttg ggaatccttt atctgaacat
     2701 cctaaagtac gcatgatgtc atttacagga tcaggcccta ctggttctaa aattatggaa
     2761 aaagccgcta aagattttaa aaaggtatca ttagagcttg gtggcaaatc accatatatc
     2821 gtcctagatg acgtagatat taaagaagcg gctaaagcaa caacaggcaa agttgttaat
     2881 aatactggtc aagtatgtac agctggtaca cgtgttttag tgcctaacaa aattaaagat
     2941 gcattcttag ctgaattaaa agaacaattt agccaagtgc gtgtcggtaa tccaagagaa
     3001 gatggtacac aagtaggccc tatcattagt aaaaaacaat ttgatcaagt acaaaattat
     3061 attaataaag gtattgaaga aggtgctgaa ttattttatg gtggtcctgg taaaccagaa
     3121 ggacttgaaa aaggatactt tgcacgtccg acaattttta ttaatgtaga taatcaaatg
     3181 acgatagcac aagaagaaat ttttgggcca gtaatgtcag ttatcactta taacgattta
     3241 gatgaagcga ttcaaattgc aaatgataca aaatatggtt tggcaggata tgttattggt
     3301 aaggacaaag aaacattgca taaagtagct cgttctattg aagcaggtac agtagaaata
     3361 aacgaagcag gtagaaagcc agatttacca tttggtggct ataaacaatc tggtttaggt
     3421 cgtgaatggg gcgattatgg tattgaagag ttcttagaag tgaaatctat agctggatat
     3481 tttaaataaa tttgattttt gaattaaaaa tcgcaataaa acagtgcaca tgactaatta
     3541 agttttgtgt actgttttaa ttttgcaatt tttataaata gattttgtaa ttaaaataaa
     3601 aatttgctat agttattcat gtatttaaaa ggttggggat tagcataatg ggattgtgct
     3661 agcacagtta tttatgcatt gtcatgccta tctattactt actaactaaa aaataatgaa
     3721 atgggtgtaa actatatgcc tgaaagagaa cgtacatctc ctcagtatga atcattccac
     3781 gaattgtaca agaactatac taccaaggaa ctcactcaaa aagctaaaac tcttaagttg
     3841 acgaactata gtaaattaaa taaaaaagaa cttgttctag ctattatgga agcacaaatg
     3901 gaaaaagatg gtaactatta tatggaaggt atcttagatg atatacaacc agatggttat
     3961 ggttttttaa gaacagtgaa ctattctaaa ggggaaaaag atatttatat atctgctagc
     4021 caaattcgtc gttttgaaat taaacgtggg gataaagtaa ctgggaaagt tagaaaatct
     4081 aaagataacg aaaaatatta tggcttatta caagttgact ttgtcaatga ccataacgca
     4141 gaagaagtga agaaacgtcc gcatttccaa gctttgacac cactttatcc agatgagcgt
     4201 attaaattag agacagaaac acaaaattat tcaacgcgca tcatggattt agtaacaccg
     4261 attggtttag gtcaacgtgg tttaatagtg gcgccaccta aagcaggtaa aacatcgtta
     4321 ttaaaagaaa tagcgaatgc aatcagtacg aacaaaccag atgcaaagct atttattttg
     4381 ttagttggcg agcgtcctga agaggtaaca gatttagaac gctcagtaga agctgctgaa
     4441 gtcgttcatt caacgtttga cgaaccacca gaacaccatg ttaaagtagc tgaattatta
     4501 cttgaacgtg caaagcgttt agtagaaatt ggggaagatg tcattatttt aatggattct
     4561 ataacgagat tagcacgcgc ttataactta gttattccac caagtggtcg tacattatca
     4621 ggtggtttag atcctgcatc tttacacaaa ccaaaagcat tcttcggtgc agcgagaaat
     4681 attgaagcgg gtggaagttt aacaatactt gcaactgcat tagttgatac gggttcacgt
     4741 atggacgata tgatttacga agaatttaaa ggaacaggta acatggagtt acatttagat
     4801 cgtaaattgt ctgaacgtcg tatcttccct gcaattgata ttggcagaag ttcaacgcgt
     4861 aaagaagaat tgttgataag taaatctgaa ttagacacat tatggcaatt aagaaatcta
     4921 ttcactgact caactgactt tactgaaaga tttattcgca aacttaaaag gtctaagaat
     4981 aatgaagatt tcttcaagca gctacaaaag tctgcagaag aaagtactaa aacgggtcga
     5041 cctataattt aataaacatt atataggggc ttgcgttttg aattaattac ctttataatt
     5101 acacagtatt gggtaaaaac tcacaaataa ctctgttcca gatggttcag ggcaaaggag
     5161 ctgaaaataa tgaaacaagg aattcatcct gagtatcacc aagtaatctt tttagatact
     5221 actacaaact tcaaattctt aagcggttct acaaaaacat cttcagaaat gatggagtgg
     5281 gaagatggaa aagaataccc agttattcgt ttagatattt catctgattc acatccattc
     5341 tacactggac gtcaaaaatt cgctgctgcg gatggacgtg tggaacgttt caacaaaaag
     5401 tttggtctta aatcaaacaa ctaatatagt aatcgttaag ctgtctgcat cctataatgg
     5461 aattgtagac agctttttta tttataagcg tagtaagggt atatacttac gactgtgttc
     5521 aaagaagtga ctcaatacca tgttgttaat acataatgat aaatttcccc ctttattaaa
     5581 gtttgtattg agtagaaaca tcgcacgaat aagaagcaac aaattagaat agctgtatat
     5641 aaatatgcaa gacaaattta taaaataatt gttcatgtac aatatcgata taattatgaa
     5701 aaagacattt atgaatattt gaaatatgat ataataaagc gattatgttt tgaaaaaggt
     5761 ggaactctca atgtatgaaa cttaccattc cggttggata gaatgtatta caggtagtat
     5821 gtttagcggt aaatccgaag aactaataag acgtctaaga aggggtatat acgctaaaca
     5881 aaaagtcgtt gtatttaaac cggcgattga tgatcgatat cataaagaaa aagtggtctc
     5941 tcataatggt aatgccattg aagcgattaa tatttctaaa gcaagtgaaa ttatgacgca
     6001 cgacttaact aatgttgatg ttataggaat agacgaagtg caattttttg acgatgaaat
     6061 tgtaagtata gtagaaaaac tatcagcaga tggacaccgt gttattgttg ctggattaga
     6121 tatggatttt aggggcgaac cgttcgaacc aatgcctaaa ttgatggctg tcagtgaaca
     6181 agtaacgaaa cttcaagcag tttgtgctgt ttgtggttct tcatctagta gaacgcaacg
     6241 attaataaat ggtaaaccag ctaaaatcga tgatccgatt atcttagtag gtgccaatga
     6301 aagttatgag ccacgttgtc gcgcgcacca tatcgtagca cctagtgata ataataagga
     6361 ggaattataa gtgtttgatc aattagatat tgtagaagaa agatacgaac agttaaatga
     6421 actgttaagt gacccagatg ttgtaaatga ttcagataaa ttacgtaaat attctaaaga
     6481 gcaagctgat ttacaaaaaa ctgtagatgt ttatcgtaac tataaagcta aaaaagaaga
     6541 attagctgat attgaagaaa tgttaagtga gactgatgat aaagaagaag tagaaatgtt
     6601 aaaagaggag agtaatggta ttaaagctga acttccaaat cttgaagaag agcttaaaat
     6661 attattgatt cctaaagatc ctaatgatga caaagacgtt attgtagaaa taagagcagc
     6721 agcaggtggt gatgaggctg cgatttttgc tggtgattta atgcgtatgt attcaaagta
     6781 tgctgaatca caaggattca aaactgaaat agtagaagcg tctgaaagtg accatggtgg
     6841 ttacaaagaa attagtttct cagtttctgg taatggcgcg tatagtaaat tgaaatttga
     6901 aaatggtgcg caccgcgttc aacgtgtgcc tgaaacagaa tcaggtggac gtattcatac
     6961 ttcaacagct acagtggcag ttttaccaga agttgaagat gtagaaattg aaattagaaa
     7021 tgaagattta aaaatcgaca cgtatcgttc aagtggtgca ggtggtcagc acgtaaacac
     7081 aactgactct gcagtacgta ttacccattt accaactggt gtcattgcaa catcttctga
     7141 gaagtctcaa attcaaaacc gtgaaaaagc aatgaaagtg ttaaaagcac gtttatacga
     7201 tatgaaagtt caagaagaac aacaaaagta tgcgtcacaa cgtaaatcag cagtcggtac
     7261 tggtgatcgt tcagaacgta ttcgaactta taattatcca caaagccgtg taacagacca
     7321 tcgtataggt ctaacgcttc aaaaattagg gcaaattatg gaaggccatt tagaagaaat
     7381 tatagatgca ctgactttat cagagcagac agataaattg aaagaactta ataatggtga
     7441 attataaaga aaagttagat gaagcaattc atttaacaca acaaaaaggg tttgaacaaa
     7501 cacgagctga atggttaatg ttagatgtat ttcaatggac gcgtacggac tttgtagtcc
     7561 acatgcatga tgatatgccg aaagcgatga ttatgaagtt cgacttagca ttacaacgta
     7621 tgttattagg agagcctata cagtatatag ttggctttgc ctcattttat ggtagaacgt
     7681 ttgatgtaaa ctcaaattgt ttgataccaa gacctgaaac tgaagaagta atgttgcatt
     7741 tcttacaaca gttagaagat gatgcaacaa tcgtagatat cggaacgggt agtggtgtac
     7801 ttgcaattac tttgaaatgt gaaaagccgg atttaaatgt tattgctact gatatttcac
     7861 ttgaagcaat gaatatggct cgtaataatg ctgagaagca tcaatcacaa atacaatttt
     7921 taacagggga tgcattaaag cccttaatta atgaaggtat caagttgaac ggcttgatat
     7981 ctaatccacc atatatagat gaaaaagata tggttacgat gtctccaacg gttacgagat
     8041 tcgaaccaca tcaggcattg tttgcagata accatggata tgctatttat gaatcaatca
     8101 ttgaagattt acctcacgtt atggaaaaag gcagcccagt tgtttttgaa attggttaca
     8161 atcaaggtga ggcacttaaa tcaataattt taaataaatt tcctgacaaa aaaatcgaca
     8221 ttattaaaga tataaatggc cacgatcgaa tcgtctcatt taaatggtaa ttagaagtta
     8281 tgcctttgct atgattagtt aagtgcatag ctttttgctt tatattatga taaataagaa
     8341 aggcgtgatt aagttggata ctaaaatttg ggatgttaga gaatataatg aagatttaca
     8401 gcaatatcct aaaattaatg aaataaaaga cattgtttta aacggtggtt taataggttt
     8461 accaactgaa acagtttatg gacttgcagc aaatgcgaca gatgaagaag ctgtagctaa
     8521 aatatatgaa gctaaaggcc gtccatctga caatccgctt attgttcata tacacagtaa
     8581 aggtcaatta aaagatttta catatacttt ggatccacgc gtagaaaagt taatgcaggc
     8641 attctggccg ggccctattt cgtttatatt gccgttaaag ctaggctatc tatgtcgaaa
     8701 agtttctgga ggtttatcat cagttgctgt tagaatgcca agccattctg taggtagaca
     8761 attattacaa atcataaatg aacctctagc tgctccaagt gctaatttaa gtggtagacc
     8821 ttcaccaaca actttcaatc atgtatatca agatttgaat ggccgtatcg atggtattgt
     8881 tcaagctgaa caaagtgaag aaggattaga aagtacggtt ttagattgca catcttttcc
     8941 ttataaaatt gcaagacctg gttctataac agcagcaatg attacagaaa tacttccgaa
     9001 tagtatcgcc catgctgatt ataatgatac tgaacagcca attgcaccag gtatgaagta
     9061 taagcattac tcacccaata caccacttac aattattaca gatattgaga gcaaaattgg
     9121 aaatgacggt aaagattggt cttctatagc ttttattgtg ccgagtaata aggtggcgtt
     9181 tataccaagt gaagcgcaat tcattcaatt atgtcaggat gacaatgatg ttaaacaagc
     9241 aagtcataat ctttatgatg tgttacattc acttgatgaa aatgaaaata tttcagcggc
     9301 gtatatatac ggctttgagc tgaatgataa tacagaagca attatgaatc gcatgttaaa
     9361 agctgcaggt aatcacatta ttaaaggatg tgaactatga agattttatt cgtttgtaca
     9421 ggtaacacat gtcgtagccc attagtggaa agtattgcaa aagaggttat gccaaatcat
     9481 caatttgaat caagaggtat attcgctgtg aacaatcaag gtgtttcgaa ttatgttgaa
     9541 gacttagttg aagaacatca tttagctgaa acgaccttat cgcaacaatt tactgaagca
     9601 gatttgaaag cagatattat tttgacgatg tcgtattcgc acaaagaatt aatagaggca
     9661 cactttggtt tgcaaaatca tgttttcaca ttgcatgaat atgtaaaaga agcaggagaa
     9721 gttatagatc catacggtgg aacaaaagaa atgtatgtac atacctatga agaacttgta
     9781 agtttaattt taaaattaaa agatattatt tgctagtagg aattctgtat aattagtata
     9841 tgttaacagt taaataagtt ataatagagg agtgtagcac tttgctatat tcctttttta
     9901 tttttaggaa gggtgggctt ttatgaaaga tttgacaatg ttattagacg aattaaaaga
     9961 tatgtccttt tttaataaag gagatatatg tttaattgga tgttcaacat cggaagtcat
    10021 tggcgaaaaa atagggactg tcggttcgat ggaagttgca gaaactattt ttaatgcatt
    10081 agatgttgtg agtaaagaga caggcgttac ttttgctttt caaggatgtg aacatatcaa
    10141 cagagcgata acaatagaaa aatctcagta taatccatta acaatggaag aagtttccgt
    10201 cgttccagat gtacatgctg gagggagttt ggcaacatac gcttttcagc atatgaagga
    10261 tccgatcgtg gtcgaacata ttactgttcc ttgtggaatt gatattggtc aaacgttaat
    10321 aggcatgcat attaaacatg tatgtgtacc tgtaaggacc tcagtaaagc aagtaggaca
    10381 ggcaattgta actattgcca catctaggcc gaaaaagatt ggtggcgaac gtgctaaata
    10441 ccaataagtt tttttgaaag aaggggagat tttatgtctt atatcaccaa gcaagataaa
    10501 gttatcgcag aagcaatcga gagagaattt cagagacaaa atagcaacat agagttaatc
    10561 gcatcggaaa attttgtatc ggaagcggtt atggaagcac aaggttcagt gttgactaat
    10621 aagtatgctg aaggctatcc aggacgccga tattatggtg gctgtgagtt tgtagatgtt
    10681 actgaaagca tcgcaattga tcgtgctaaa gcattgtttg gagctgaaca tgtcaatgtt
    10741 caaccacatt caggttcaca agcgaacatg gctgtttact tagttgcatt agaaatgggc
    10801 gacacagttt taggtatgaa tttgagtcat ggtggtcact tgacacatgg agcgcctgtt
    10861 aattttagtg gtaaattcta caatttcgtt gaatatggag tagataaaga cacagaacga
    10921 atcaattatg atgaagttcg taaattagcg ttagagcata agcctaagct tattgtggca
    10981 ggagcatcag catattcaag aacaattgac ttcaaaaagt ttaaagaaat cgcagatgaa
    11041 gtaaacgcta agttaatggt agacatggca catattgcag gattagtagc ggcaggttta
    11101 catccaaatc cagtagaata tgctgatttt gtaacaacta caacacacaa aacattacgc
    11161 ggaccacgtg gtggtatgat tttatgtaag gaagaatata aaaaagacat agataaaaca
    11221 attttccctg gtattcaagg tggacctctt gagcatgtta ttgcagcaaa agcagttgct
    11281 tttggagaag cgttagaaaa taatttcaaa acgtatcaac aacaagtggt taaaaacgca
    11341 aaagttcttg cagaagcatt aattaatgaa ggatttagaa ttgtttctgg cggtacagat
    11401 aatcacttag tagctgttga tgtaaaaggg tctataggac ttactggtaa agaagctgaa
    11461 gagactttag attcagttgg tatcacatgt aacaaaaata ccattccgtt cgatcaagaa
    11521 aaaccttttg taacgagtgg tatacgttta ggtacacctg ctgcaacaac gcgtggattt
    11581 gatgaaaaag cttttgagga agttgcaaaa atcatcagtt tagcattgaa aaatagtaaa
    11641 gatgaagaaa aattacaaca agctaaagaa cgcgttgcga aattaacagc tgaatatcct
    11701 ctatatcaat aaacatacac aaagatagga gtaattttta tgagtaaagt acacgttttc
    11761 gatcatccat taattcaaca caaactaagc tatattagag atgtaaatac aggtactaaa
    11821 gaatttagag aacttgtaga cgaagttggt atgttgatgg catatgaagt aactagagac
    11881 ttagagcttc aggatgttga tattgaaacg cctgtaacta aaatgacggc taaacgatta
    11941 gctggtaaaa aattagctat cgttccaatt ttaagagctg gtttaggtat gactgatggt
    12001 attttaagtt tagtacctgc agccagagtt ggacatatcg gtttatatcg agatcccgaa
    12061 acattaaagg ctgtagagta ttttgctaag ttacctcaag atattactga aagacaaatc
    12121 attgttgttg atcctatgtt agcaacaggc gcatcagcaa ttgaagctat tacttcattg
    12181 aagaaacgtg gcgctaaaaa tattcgcttc atgtgtttaa ttgcagcacc agaaggcgta
    12241 gaaaagatgc atgaagcaca tccagatgta gatatttata ttgctgcact tgatgaaaag
    12301 ctaaatgaca aagcatatat cacaccaggg ttaggcgacg ctggagatag attgtttggt
    12361 actaaataga agaatcggag ataagtagtt tgatgaaaaa gattatgacc atatttggaa
    12421 caagacccga agccataaag atggctcctt tagttaaagc tttggaacaa gaaaaaatgc
    12481 tcgagccaat tgttgttgtt acagcacagc atagagaaat gcttgattca gtattaagta
    12541 cctttgaaat caaaccaaaa tacgatttga atattatgaa atcaggacag acactttctg
    12601 agataacttc taaatcaatc actcaattag aacaagtgat tcaattagaa aaaccagaca
    12661 tggtacttgt acatggtgat acgatgacga catttgcagg tggtttagcg gcattttata
    12721 accaagtgcc gattggacac gttgaagcag ggcttagaag ttatgataaa tattcacctt
    12781 ttccagaaga ggtgaataga caattagttg gtgtattagc tgacttacat tttgcaccta
    12841 ctaaaaatgc tgcatcgcat ttgttaagtg aagggaaata ttcagaaagt gttgttgtca
    12901 ctggtaatac tgcgattgat gctatgaaat atacagttga tgacaattat aaatctaaca
    12961 tcatggataa ataccatgac aaaaaattca ttcttatgac agcacaccga cgagaaaata
    13021 tcgggaaacc catggaaaat atatttaaag cggttagacg cttaatagat gagtatactg
    13081 atttagcact ggtatatcca atgcataaaa acccgaaagt tcgagaggtg gctcaaaaga
    13141 ttttaggtag tcatgacaga attgaattga ttgaaccttt ggacgtagta gatttccata
    13201 attttgctaa aaaatcttat tttattttga cagattcagg tggaattcag gaagaagcgc
    13261 catcatttaa taagccagtt ttagttttgc gaagtgttac agaacgtcct gaaggtgttg
    13321 aagctggcac attaaaagtc attggaacaa ataagcaaaa tgtgtatcaa gctgcaaaag
    13381 aattaatcga tgatgagaga ttatatcatc aaatgtctga agcatctaat ccttacggtg
    13441 atggatttgc ttcagaaaga atagttaatc atattaagta ttatttgaat ttaatcactg
    13501 aaaaaccaag cgatttctga ggaaaataga ctttttgtct aattgtgtct aaattgtgtc
    13561 taactatgct tattttttta caacaatttg aatagaattg acaccacaaa tcgcctatat
    13621 tatcatttag tttgtatgag tggaacggtt ttcatgattg atatcagtca cacggaggca
    13681 tataaaatga gtcgtttcta caacattttt aaacagttca ttcaatatta tttttatcta
    13741 ataataatat tgggaggatt atacctttat acacaccatg catttatctt aggattaatc
    13801 attggtgtta ctggttctgc aatcaacaca tgtatttttg aatgctattt agctaaagct
    13861 aaaagaccag acactatgca tatttcaact ggaaatatgt ggcgatactt agttgcaatt
    13921 attgcctgta tgatttggta ccttaataaa gcgcatgtaa gtatcatcgg tataattatt
    13981 ggtttaatga tttcatatgt tgtagttatc atacgtcctt tactaaaggt gagcaaataa
    14041 attaagaaag aggtgagatt atggatcaca aatccccgct cgtgagttgg aatttattcg
    14101 gttttgatat cgttttcaat ttatcaagta tattgatgat acttgttacg gcgtttcttg
    14161 tttttctact tgctatcatt tgtacgcgta atttgaaaaa aagaccaact ggcaaacaaa
    14221 atttcgttga atggattttt gatttcgtga ggggaatcat tgaaggtaac atggcttgga
    14281 aaaaaggtgg tcaattccac ttcttagcag taacgctgat tctgtacatt tttatagcta
    14341 atatgttagg tcttccgttt tctatagtaa cgaaagatca cacattgtgg tggaaatcac
    14401 cgacagctga tgcaacagtg actttaacgt tgtctacaac gataatactg ttaactcact
    14461 tttatggaat taaaatgcgt ggtacgaaac aatatcttaa aggttatgta cagccgtttt
    14521 ggccattggc aattattaat gtttttgaag agttcacttc aacattaacg cttggtctgc
    14581 gtttgtacgg taacatattt gcaggtgaga tactattaac attacttgct ggcttattct
    14641 ttaacgaacc agcatggggt tggattatta gtatcccagg attaattgtt tggcaagcat
    14701 tttcaatatt tgtaggaaca atccaagcat atatctttat tatgctttcg atggtttata
    14761 tgtcacataa agtggcagat gaacactaaa aatttcaata attatataca atcacaggag
    14821 gaaattaaat tatgaattta atcgcagcag caatcgcaat tggtttatca gcattaggag
    14881 caggtatcgg taacggttta atcgtttcaa gaacagttga aggtgtagca cgtcaaccag
    14941 aagcacgtgg tcaattaatg ggtatcatgt tcattggtgt aggtttagtt gaggcattac
    15001 ctatcatcgg tgtagtaatt gcattcatga catttgctgg ataattaaca gataaaagag
    15061 gtcgggacaa agcgcatagg acataattca tgatgcatat atagtaatat ctttgaactt
    15121 tattaaatag ttgagatatg aacgcaccat gcctatcgca taaattcagt aggtcctaac
    15181 ctcgtcgttt ttttctatat aacactagcg attattttaa tgaaaggagt gtcatgaacc
    15241 cgtgactgaa acagctaact tattcgttct tggtgcagct ggaggcgttg agtggggtac
    15301 tgtgattgta caggtcctaa ctttcatcgt gttacttgcg ttacttaaaa agttcgcatg
    15361 gggtccattg aaagatgtaa tggataaacg tgaaagagat attaacagag atatcgatga
    15421 cgcagaacaa gctaagttaa atgcacagaa acttgaagaa gaaaataaac aaaaacttaa
    15481 agaaacacaa gaagaagttc aaaagatttt agaagatgct aaggttcaag cacgtcaaca
    15541 gcaagaacaa attattcatg aagcaaacgt acgtgcaaac ggtatgattg aaacagcaca
    15601 aagtgaaatc aatagccaaa aagaacgtgc cattgcagat attaataatc aagtatctga
    15661 actatcagtg ttaattgctt ctaaagttct tagaaaagaa atttctgaac aagaccaaaa
    15721 agcattggtt gacaagtatc taaaagaggc aggcgataaa taatggtaaa agtagctaac
    15781 aagtatgcta aagcattatt tgacgtgtca ttagatacaa ataatttaga gactattaat
    15841 gaagaattaa cagttataaa tgaagcagta aaagataaaa ttgagcaatt gagaatggtt
    15901 gacagtaatc caactcaaac agcagaacaa cgtcgtgagt tgattaatgg tgtatttact
    15961 gacattaatc catacattaa aaatatgatg tacgtgttag cagataatag acatatctca
    16021 ttaatagctg acgtattcaa ggcgttccaa agcttatata acggacacta caatcaagat
    16081 tttgcaacaa ttgagtcaac atatgaattg agtcaagaag agttagataa gattgtcaaa
    16141 ctagtaactc aacaaacgaa gttatctaaa gttattgtag atacaaaaat taatccagat
    16201 ttaattggtg gatttagagt taaagtcggc acaactgtat tagatggtag tgttagaaat
    16261 gatcttgtcc aattacaaag aaaatttaga agagttaatt aattataaag aggagtgaca
    16321 tagatggcca taaaagctga agaaatcagt gcattacttc gctcacaaat tgaaaattat
    16381 gagtcagaaa tgtccgtaac tgatgtaggt actgtattac aaattggtga tggtattgca
    16441 ttaattcacg gattaaatga cgttatggct ggtgagctag tagaattcca taacggcgta
    16501 cttggtttag cccaaaacct tgaagagtca aacgtgggtg tggttatttt aggaccatac
    16561 acaggtatta ctgaaggtga cgaagttaaa cgtactggtc gtatcatgga agtaccagta
    16621 ggtgaagaac taatcggaag agttgttaat ccattaggac aacctattga tggacaagga
    16681 ccgattaaca caactaaaac acgtccagta gagaaaaaag ctactggtgt aatggatcgt
    16741 aaatcagtag atgagccatt acaaacaggt atcaaagcaa ttgatgcttt agtaccaatt
    16801 ggtagaggtc aacgtgagtt aatcatcggt gaccgtcaaa caggtaaaac aacaattgca
    16861 attgacacaa ttttgaacca aaaagatcaa ggtacgattt gtatctatgt tgctattggt
    16921 caaaaagatt caacagtaag agcaaatgtt gaaaagttaa gacaagcagg cgctttagac
    16981 tacactattg ttgtagcagc atcagcttct gaaccttctc cattattata tattgcacca
    17041 tattcaggtg taacaatggg tgaagaattc atgtttaacg gtaaacatgt tttaatcgtt
    17101 tatgatgatt taactaaaca agcagcagct tatcgtgagt tatcattatt attacgtaga
    17161 cctccaggtc gtgaagcata cccaggtgac gtattctact tacatagtag attattagaa
    17221 agagcagcaa aattaaacga tgacttaggt ggcggttcaa ttactgcatt accaattatc
    17281 gaaacacaag ctggtgatat ttcagcttat gtaccaacaa acgttatttc aattacagat
    17341 ggacaaatct tcttacaatc tgatttattc ttctcaggtg taagaccagc gattaatgcc
    17401 ggacaatctg tatctcgtgt tggtggatct gcacaaatta aagcaatgaa gaaagttgct
    17461 ggtacgttac gtcttgactt agcgtcatac agagaacttg aatcatttgc acaattcggt
    17521 tcagaccttg atgaatttac tgcaagtaaa ttagaacgtg gtaaacgtac tgttgaagtc
    17581 ttaaaacaag atcaaaacaa accattacca gtcgaacacc aagtgttgat tatttatgca
    17641 ttaacaaaag gatatttaga tgatattcca gttgtagata tcacacgttt tgaagacgag
    17701 ttaaaccact gggcagaatc aaatgctact gaactgttaa atgaaatcag agaaactggt
    17761 ggcttaccag atgctgagaa gtttgacaca gcaattaacg aattcaaaaa aagctttagc
    17821 aaatctgaat aataaacaag tttagtataa ggtggtgaga tagtggcttc tcttaaagaa
    17881 atagatactc gaataaaatc aaccaaaaaa atgaagcaga ttacgaaagc gatgaacatg
    17941 gtatcaagtt caaaacttcg tagagctgaa aaaaatacaa aacaattcac accatatatg
    18001 gataaaatgc aagatgcaat tactgcagtt gcaggggcaa gtagcaatac aaaccatcca
    18061 atgctaagac ctcgtaaaat tactagaagt ggatatttag ttatcacgag tgataaaggt
    18121 ttagcaggtg catatagtgc aaacgtgctt aaaaaattga ttactgatat tgaagcgaaa
    18181 catcaagata gtagcgaata cagtattgta gttttagggc aacaaggtgt tgatttccta
    18241 aaaaatagag gttatgacat tgagtattct caagtagacg tacctgatca accttctttc
    18301 aaatctgttc aagcactagc taaccatgct atagacttat acagtgaaga agaaattgat
    18361 gaattaaata tatactatag tcattatgtc agcgttcttg aaaacaagcc tacatctaga
    18421 caagtattac cattatctca agaggattct agtaaggggc atggtcattt gtcttcttat
    18481 gaatttgagc cagataaaga atctatctta agtgtaatct tgcctcaata tgttgagagt
    18541 ttgatttacg gaacaatatt agacgcaaaa gcaagtgagc atgcaacacg tatgactgcg
    18601 atgaaaaatg ccactgataa tgcaactgaa cttattgatg acttatcatt agaatataac
    18661 agagcgagac aagcagaaat tacgcaacaa attactgaaa ttgttggtgg ttccgcagcg
    18721 cttgaataat atttaaagga ggaaaatagc atgggaattg gccgtgtaac tcaagttatg
    18781 ggtcctgtaa ttgatgttcg atttgaacat aacgaagttc ctaaaattaa taacgccttg
    18841 gttattgatg tgcctaaaga agaaggtaca atacaactaa cattagaagt tgcgctgcaa
    18901 ttaggtgacg acgttgttcg tacaattgcg atggattcaa ctgatggtgt ccaaagaggc
    18961 atggatgtaa aagatacagg caaagaaatt agtgtacctg ttggtgacga aacattaggt
    19021 cgtgtattta atgtactagg tgaaacaatt gaccttaaag aagaaattag tgattctgtt
    19081 cgccgcgatc ctatccatcg tcaagcacca gcattcgatg aactttcaac agaagttcaa
    19141 attttagaaa caggtattaa agtagtagat ttactagcac cttatattaa aggtggtaaa
    19201 atcggattgt tcggtggtgc cggtgtaggt aaaacagtat taatccaaga attaattaac
    19261 aacatcgctc aagagcacgg tggtatttct gtattcgccg gtgtaggtga acgtactcgt
    19321 gaaggtaacg atttatactt cgaaatgagt gacagtggtg taattaagaa aacagccatg
    19381 gtattcgggc aaatgaatga gccacctggt gcacgtatgc gtgttgcatt atctggttta
    19441 acaatggctg aatatttccg tgacgaacaa ggtcaagacg tattattatt catcgataac
    19501 attttcagat ttacacaagc tggttctgag gtatctgcat tattaggtcg tatgccttct
    19561 gcagtaggtt accaaccaac acttgctact gaaatgggac aattacaaga acgtattacg
    19621 tctacaacaa aaggatcagt tacttctatt caagcggtat tcgtacctgc cgatgactat
    19681 actgacccag cgcctgcgac agcgtttgcc catttagatg caactacaaa cttagaacgt
    19741 aaattaactg aaatgggtat ttatccagcc gtggatccat tagcgtctac atcaagagca
    19801 ttggaaccat caattgtagg tcaagaacat tatgaagtag ctcgtgatgt acaatcaaca
    19861 cttcaaaaat accgtgaatt acaagatatc attgctatct taggtatgga cgaattatct
    19921 gatgaagata aacaaacagt tgaacgcgca cgtagaattc aattcttctt atctcaaaac
    19981 ttccacgtag cggaacaatt tactggtcaa aaaggttctt atgtacctgt taagacaaca
    20041 gttgcaaact ttaaagatat cttagatggt aaatatgacc atattccaga agatgcattc
    20101 cgtttagttg gtagcatgga tgatgttatt gcaaaagcta aagatatggg tgttgaagta
    20161 taacaattag gaggaatgga taatgaatac attaaaccta gatattgtca ctcctaatgg
    20221 ttctgtttac aatcgtgata atgttgaact cgttgttatg caaacaacag ctggtgagat
    20281 aggtgtcatg agtggacata ttccaactgt agctgcttta aaaacaggct ttgtaaaagt
    20341 gaaatttcac gatggaactg aatatattgc tgtaagcgat ggctttgttg aagttagaaa
    20401 agataaagtt tcaatcattg ttcagactgc agaaactgca agagaaattg atgttgaaag
    20461 agctaaatta gccaaagcaa gagcagagtc tcacttggaa aatgatgacg acaatactga
    20521 tattcataga gccgaaagag ctttagagag agcaaataac cgtttgcgtg tggctgaatt
    20581 aaaatagtaa ataaagggtc gaagatgtga tttcatatct tcgacccttt tttgaattat
    20641 attgatttaa agatacaaaa catgagaggg gggaaggaat tgataaagaa ccattaaaga
    20701 tttatgatgt agtggttctt tatcattaaa cacagctaat gtgtatttaa aaataggaat
    20761 acatgagtaa aactcatgta taagaaatac taatttctaa agaaaaagta tttctttatg
    20821 ttggggcccc gtcaactact gccaaataca acactataga gtctagacat tgatttatgt
    20881 ccgactccca agaatagttt tactttttta caatcactaa tagattgcta aaatcaaaat
    20941 ttccttcacc actatctaca gtcgacattt cattttttga aattatctac attttttcat
    21001 accaagatat tttatagtta tgatatttat gtaaaaagaa ttatatagta agttagctta
    21061 aactttacta aaaacgggta ttaaactttg tatcattatt taaatttttc atgtacaatg
    21121 taatacagta atcttatgag gtgataaaat ggattatatc ggacaatatg cagttatcca
    21181 tttagtgtta catgttgtat gtatttgtat tgcctattgg gctttacaat caattagatt
    21241 agatcaattt tttaaaaaag gatacgccac tcaattacaa gtgtgtatga tatttgttgc
    21301 tattttatta ggcactgcag taagcaattt tattgtagat ttgttacaat actcgacgca
    21361 ggtaaaatat ttaataaaat aagtctaact ctatgatttg taatcaaaac tagatataat
    21421 taaataatga cttaaaataa ttttaaaata gggaaatgta aagtaatagg agttctaagt
    21481 ggaggattta cgatggataa aatagtaatc aaaggtggaa ataaattaac gggtgaagtt
    21541 aaagtagaag gtgctaaaaa tgcagtatta ccaatattga cagcatcttt attagcttct
    21601 gataaaccga gcaaattagt taatgttcca gctttaagtg atgtagaaac aataaataat
    21661 gtattaacaa ctttaaatgc tgacgttaca tacaaaaagg acgaaaatgc tgttgtcgtt
    21721 gatgcaacaa agactctaaa tgaagaggca ccatatgaat atgttagtaa aatgcgtgca
    21781 agtattttag ttatgggacc tcttttagca agactaggac atgctattgt tgcattgcct
    21841 ggtggttgtg caattggaag tagaccgatt gagcaacaca ttaaaggttt tgaagcttta
    21901 ggcgcagaaa ttcatcttga aaatggtaat atttatgcta atgctaaaga tggattaaaa
    21961 ggtacatcaa ttcatttaga ttttccaagt gtaggagcaa cacaaaatat tattatggca
    22021 gcatcattag ctaagggtaa gactttaatt gaaaatgcag ctaaagaacc tgaaattgtc
    22081 gatttagcaa actacattaa tgaaatgggt ggtagaatta ctggtgctgg tacagacaca
    22141 attacaatca atggtgtaga atcattacat ggtgtagaac atgctatcat tccagataga
    22201 attgaagcag gcacattact aatcgctggt gctataacgc gtggtgatat ttttgtacgt
    22261 ggtgcaatca aagaacatat ggcgagttta gtctataaac tagaagaaat gggcgttgaa
    22321 ttggactatc aagaagatgg tattcgtgta cgtgctgaag gggaattaca acctgtagac
    22381 atcaaaactc taccacatcc tggattcccg actgatatgc aatcacaaat gatggcattg
    22441 ttattaacgg caaatggtca taaagtcgta accgaaactg tttttgaaaa ccgttttatg
    22501 catgttgcag agttcaaacg tatgaatgct aatatcaatg tagaaggtcg tagtgctaaa
    22561 cttgaaggta aaagtcaatt gcaaggtgca caagttaaag cgactgattt aagagcagca
    22621 gccgccttaa ttttagctgg attagttgct gatggtaaaa caagcgttac tgaattaacg
    22681 cacctagata gaggctatgt tgacttacac ggtaaattga agcaattagg tgcagacatt
    22741 gaacgtatta acgattaatt cagtaaatta atataatgga ggatttcaac catggaaaca
    22801 atttttgatt ataaccaaat taaacaaatt atacctcaca gacagccatt tttattaatt
    22861 gataaagtag ttgaatatga agaaggtcaa cgttgtgtgg ctattaaaca agtatcagga
    22921 aacgaaccat tctttcaagg gcattttcct gagtatgcgg taatgccagg cgtattaatt
    22981 actgaagcgt tagctcaaac aggtgcggta gctattttaa atagtgaaga aaataaaggt
    23041 aaaatcgctt tatttgctgg tattgataaa tgtcgtttta aacgtcaagt agtacctggt
    23101 gatactttaa cgttggaagt agaaatcact aaaattaaag gaccaatagg taaaggtaat
    23161 gctaaagcta ctgtcgatgg tcaacttgct tgtagttgtg aacttacatt tgcaattcaa
    23221 gatgtaaaat aaaacaaaaa aaaacattca aagatttaat gtgttggcat aatctttgaa
    23281 tgttttttat tttactcttc taatttttca tcctttaact ttggtttaga ctgcatcatt
    23341 cgattaaatg atttttttaa ttcttcacca gataatccat catcaataag ttgttctaat
    23401 aaactttcag catactgttg acgtaaagtg taaatatgac attcaaatac gatagacatt
    23461 gttgttttaa aatttttaat acttttcaca gtagattcaa ataaagctgg atcattggct
    23521 ggacgcgtga tgacgacacg aatatccaat aactgttcat tgtcttgata ttccttaaat
    23581 gtttcataat gctcattaga aatgacaatt tcaagcaacc aacccgtgcc actttcctct
    23641 ttattaatta ttacgccatc ttctaattca tattctataa ttctgccgtg ttcattcaca
    23701 atttgaaacc ttactgcttt aaaagttttc atattcccac atcccattag tttaatattt
    23761 atgatttttg aattatttag aagatttaag gtcatttcat gactaatttc tttaaatata
    23821 acaaataacg agatgctata gctattaatt atataaaatt tgccattttg accattttta
    23881 agctagtaat taagatatag gcataggagg tgaatcacac actacatgct aaataaaatc
    23941 gtaattgtcg ggagactgac gaaagacgca caaatatttg aaaaggagga tagaaaaatt
    24001 gcaacgtttt gtgttgcaac gcaccgaaat tataaagatg aaaatggaga aatcgtctgt
    24061 gattacttat tctgtaaagc atttggcaag ttagcttcta atatagaaaa atatactaat
    24121 caaggtacat tggttggtat aactggtcaa atgagatcaa gaaagtatga taaagacgga
    24181 caaacacact ttgtcactga attatatgtt gaaacaataa aatttatgtc ccctaaatcc
    24241 caaaataatg aaattctctc agatagtatt ttagatattg actctcaaaa tatagataat
    24301 catgacttat tagaaattta aatccaatta tcctaaacat ccttaatata catttaatcc
    24361 atcctaaatt ttttatagat ctaattaact tgaaatatac tcacttaaaa acgacttaca
    24421 tgactagtac tgttgtgtag gtcgtctttt tgtgtagttt ttctaataga aaatagacat
    24481 agattgcaaa acgattacat aaaaaattgc aaataaaaaa catttttact gtcatgacaa
    24541 ttctcgatag aatcatatct gaaattatgg gggatttcgt tgtaatcact gtgtaaaaaa
    24601 caaggctatt tttttatttt gttgtaacct gcacggattt tatagatgtt acagtagtct
    24661 ctgtaaaact tttagagaaa caaattactt gtaggaggat tttaagatta tgaagaaaac
    24721 attactcgca tcatcattag cagtaggttt aggaatcgta gcaggaaatg caggtcacga
    24781 agcccatgca agtgaagcgg acttaaataa agcatcttta gcgcaaatgg cgcaatcaaa
    24841 tgatcaaaca ttaaatcaaa aaccaattga agctggggct tataattata catttgacta
    24901 tgaagggttt acttatcact ttgaatcaga tggtacacac tttgcttgga attaccatgc
    24961 aacaggtact aatggagcag acatgagtgc acaagcacct gcaactaata atgttgcacc
    25021 atcagctgtt caagctaatc aagtacaatc acaagaagtt gaagcaccac aaaatgctca
    25081 aactcaacaa ccacaagcat caacatcaaa caactcacaa gttactgcaa caccaactga
    25141 atcaaaatca tcagaaggtt catcagtaaa tgtgaatgct catctaaaac aaattgctca
    25201 acgtgaatca ggtggcaata ttcatgctgt aaatccaaca tcaggtgcag ctggtaagta
    25261 tcaattctta caatcaactt gggattcagt agcacctgct aaatataaag gtgtatcacc
    25321 agcaaatgct cctgaaagtg ttcaagatgc cgcagcagta aaattatata acactggtgg
    25381 cgctggacat tgggttactg cataagccat ttatgcatag ctaattaata gttatataag
    25441 taacttttag attggaatat atcggggaat tctcgatatg ttccggtttt tttatttcgc
    25501 aaatatatgt cattatagaa ttattattta aagataataa tacaactgag caacaataat
    25561 tgaaaatgtt gaaaccgttt gctaagatta atttgcaatt gaatactaag gaactactag
    25621 gggagcctaa tgatatggct gagatgaatt gttcagaccc ttatgacctg atttggttag
    25681 taccaacgta ggaaagtagt tattgaagtg atggggctag tatagcaaca ttgccatcaa
    25741 actactttca tgttggaagt agttttttta tttagggagg attttttaca atggaatttt
    25801 cacaaaaatt gtaccaagct gcaaagccaa tcattaatga tatttatgag gatgacttta
    25861 ttcagaagat gttatccgga gatataggag ctgacgcatt acgccattac ttaaaagctg
    25921 atgctgcgta tttaaaagaa tttacaaact tatatgcttt gttaattcca aaaatgaata
    25981 gcatgaatga cgtaaaattt ttagtagagc aaatagaatt tatggttgaa ggtgaagtac
    26041 ttgcgcatga tattttagcg caaattgttg gtgaatcata cgaagaaatc attaaaacaa
    26101 aagtttggcc tccaagtggc gaccattaca taaaacatat gtatttccaa gcgcatagtc
    26161 gtgaaaatgc tatttataca attgctgcaa tggcaccttg tccatatatt tatgcagaat
    26221 tagctaagcg ctctcaaagt gatcataagc ttaatagaga aaaagatacg gcaaaatggt
    26281 ttgattttta tagtactgaa atggatgaca taattaacgt atttgaggca ttaatgaata
    26341 aattagccga atcaatgtct gacaaggaat tggaacaagt aaagcaagta tttttagaaa
    26401 gttgcataca tgagcgtcga tttttcaata tggctatgac actagaacaa tgggaatttg
    26461 gaggaaaagt aaatgattaa acctaaaata gcattaacca ttgcaggtac tgatccaaca
    26521 ggtggtgccg gcgtaatggc tgatttaaaa tcatttcatt catgtggtgt atatggtatg
    26581 ggcgtcgtta caagtattgt tgctcaaaat acattgggcg tacaacatat tcataattta
    26641 aatcatcaat gggtagatga acaacttgat agtgtcttca atgatacctt acctcatgct
    26701 attaaaacgg ggatgattgc tacagcagat actatggaaa cgattcgtca ttatttaatg
    26761 caacatgaat ctattccata tgtaattgat cctgttatgt tggcgaaaag cggtgattca
    26821 ttaatggata atgacacaaa gcaaaacttg cagcatacgt tattgccatt agctgacgta
    26881 gtaacaccga atttaccaga agctgaagaa ataacgggac taaccattga tagtgaagaa
    26941 aaaattatgc aggctggccg catctttatt aatgagattg gtagtaaagg tgtcatcatt
    27001 aaaggcggtc attcaaatga tactgatata gcaaaagatt atttatttac taacgaaggt
    27061 gttcaaacat ttgaaaatga acgatttaaa acaaaacata cgcatggaac agggtgtaca
    27121 ttttcagcag ttataacggc agaacttgca aaaggtagac cattatttga ggctgtacac
    27181 aaggctaaaa agtttatttc aatgagtata caatatacgc ctgaaatcgg ccgtggtaga
    27241 ggtccagtga atcattttgc atatttaaag aaagagggat tagacgatga attatctaaa
    27301 taaaatacgt attgaaaacc cattaacaat ttgttataca aacgatgtag ttaaaaattt
    27361 tacagcgaat ggtttattaa gtattggtgc tagccctgca atgagtgaag ctcccgaaga
    27421 agctgaagaa ttttacaaag ttgcacaagc gctattaatc aatatcggta ctttaacagc
    27481 agaaaatgaa caagatatta ttgcgattgc tcaaacggca aatgaggcag gcttacctat
    27541 tgtatttgac cctgtagctg ttggtgcttc tacatatcga aagcaatttt gtaaattatt
    27601 attgaaatca gcgaaagtat cagtaattaa aggcaatgca tctgaaatat tagcgttgat
    27661 tgatgataca gcaactatga aaggtacaga tagtgatgct aatcttgatg cggttgcaat
    27721 agcgaaaaag gcttacgcaa catataaaac tgcaatagta atcacaggta aagaggacgt
    27781 tattgttcaa gataataaag ccttcgtatt agctaatgga tctccattat tagcacgagt
    27841 aactggagct ggttgtttat taggaggcgt tattgctgga tttttattta gagaaacaga
    27901 accagacata gaagcgttaa ttgaagcggt aagcgtattt aatattgctg ctgaggtagc
    27961 tgctgaaaat gaaaattgtg gtggtcctgg tacgttttca ccattgttgc ttgatacgtt
    28021 atatcattta aatgaaacaa cctatcaaca acggattcgt attcaagagg tggaataata
    28081 tgtttaacca atcgtatcta aatgtgtatt ttatttgtgg gacctccgat gttccgagtc
    28141 atcgaactat tcatgaagta ttagaagcag cattaaaggc agggattaca cttttccaat
    28201 ttcgagaaaa gggtgaatca gctttaaaag gaaacgataa acttgtatta gctaaagaat
    28261 tacagcatct ctgtcatcaa tatgatgtgc cttttatcgt taatgatgat gtatccttgg
    28321 caaaagaaat taacgcggat ggtatacatg tcggtcaaga tgatgcgaaa gtcaaagaga
    28381 tagcacaata tttcactgat aaaattattg gacttagtat tagtgattta gatgagtatg
    28441 caaaatctga tttaactcat gttgattata taggtgttgg accaatctat cctacgccgt
    28501 cgaagcatga cgcgcatata ccagtaggtc cagaaatgat tgcaacgttt aaagaaatga
    28561 atccgcaact accgattgta gctattggcg gtatcaatac taataatgtg gcgccgattg
    28621 tagaagcagg tgccaatgga atttcagtca tttcagccat ttctaaaagt gaaaatattg
    28681 aaaagactgt taatcgattc aaagattttt ttaataatta gttaaatttt tccacttatt
    28741 gtttcatacg tactcattaa tgtgatagaa taaatcctat gtgaatataa tgatagaggt
    28801 ggaaaaatga agaaaaaagc gttactacca ttatttttag gtattatggt ctttttggct
    28861 ggttgtgact attctaaacc tgaaaaacgt agtgggtttt tctacaatac attcgtagat
    28921 ccaatgaaaa atgtattgga ttggttggga aataacttat taaacgacaa ttatggttta
    28981 gctattatta tccttgtatt ggtaattcgt attattttat taccattcat gttgtcaaac
    29041 tataaaaata gtcatatgat gcgtcaaaaa atgaaagttg caaagccaga agttgaaaaa
    29101 attcaagaaa aagtgaaacg tgcgcgtaca caagaagaaa aaatggctgc aaaccaagaa
    29161 ttaatgcaag tatataaaaa gtatgacatg aacccgatta agagtatgtt gggttgttta
    29221 ccaatgctaa tccaattacc aatcatcatg ggattatact ttgtacttaa agaccaactt
    29281 gtagatggtt tgtttaaata tccacacttc ttatggttcg atttaggacg tcctgatatt
    29341 tggattacaa ttattgccgg tgttttatac tttatccaag catatgtatc aagtaaaacg
    29401 atgccagacg aacaacgtca aatgggttac atgatgatgg tcatttcacc aattatgatt
    29461 atctggattt cattaagctc agcatcagca cttggtttgt actggtcagt cagtgcggcg
    29521 ttccttgtag ttcaaacaca ctttgcgaac atttattatg aaaaagtcgc taaaaaagaa
    29581 gtacaacctt tcattgaagc gtatgaaaga gagcacaacg gcggcagcaa taaaaaaggc
    29641 aaaaacacac aagttgtgtc taaaaagaaa aagaaataac cttagcaagt ccaaataatg
    29701 tgcaccctaa aagttgaaga taattttaac tttatagggc gcacattatt tttcgcttca
    29761 atagcgaaac ttagtgtcac attatacaat atgtgataaa tagaaacagc agtaagatga
    29821 tttcaaatgt gaaagtcatc ctactgctgt ttttatttga aataatatta acgagttttc
    29881 agtatgtaaa aagtggttaa taacagagtt gtcattcttc atcgcaatgt catcttgaca
    29941 caatgattca tcagtgtagc agtatatgtc gcaaatttcc acagcaattc acttatacat
    30001 gtaacagtgt gaaataataa cgtcacaacg gcataataca cattgcaacg tcccaacaac
    30061 atatcataga atcgtaacgg catgacatca acaccaaacc tggctataac accataacag
    30121 cgcaacgcca catcatagca ctacatcaag tcgcatcgta gcaccagcac atcaaagtaa
    30181 catggcatca acatcaaacc ggtctataac accataacac cgcaatgcca catcatagca
    30241 ctacatcaag tcgcatcgtg gtaccagcac atcaaagtaa catggcatca acgccaaacc
    30301 tgtctataac accataacac cgcaatgcca catcatagca ctacatcaag acgcatcgtg
    30361 gtaccagcac atcaaagtag catgacatgt caccaagctc ccacaacaac acatcaaagt
    30421 aacatggcat gacaccaagc ttccacaaca acacgccatt acatcgcatc atcatactac
    30481 aacttcaatg tctagtcgtg acaattccat tccgtaaaaa actgtttcaa gtacatcatc
    30541 ataaagtcgt gacgttcttt agcaatcatc ttcgccgtat ctgtatgcat taaagattct
    30601 aacttaagta atttttcaaa gaaatgttta attgcagatg gtggcaactg ttcaactaaa
    30661 tcatcattaa tcttatctag tgacatatgt tctgtccaca taggttcacc aaagtgtcct
    30721 gcaaattgaa atgttcgtgc aacacctata gcgcctatag catcaagacg atctgcatcc
    30781 ctgacaattt gaccttctaa agataaagtg acatgatcat ttttgccatt gcgatagctc
    30841 atattattaa taataaataa aatgtgctct tgatcttcgg ttgatagtga taaagaagat
    30901 aaaaatgact tcaattcaac atattgtttg ttagcatcta caactttttc gtcaacggta
    30961 tcatgaagca aacatgcgag ttcaatgact aaagtatcat taacaccttc attttcagcg
    31021 attgatttag ctaaagcagt gacacgatat acatgcgcaa tatcatggcc tgtataatca
    31081 ttttgatgaa tagattccat atattttttg gcagcactaa tgacgtctga ttgttgcatt
    31141 aaagttacac tcctcatatt tctattttat aagataggtg acaataattg tgaaatacct
    31201 tctttaaatt taatccaaag acttcgctta gcataacgtg cttttgttaa ttcagaagat
    31261 actgctaaat catctataaa agcttgtttt aattttttgg caatttgttg gtcataaata
    31321 aaagcgttga cttcgaaatt caatgtgaaa ctgcgatggt ccatattagc tgttcccaca
    31381 cttgcaattt catcatctat aacaagtgtt tttgagtgta aaaagccatt gtcgtagtga
    31441 aatactttaa caccggcatc taataaggat gctgcatttt ttaaagtagc ccaaaaaaca
    31501 aacggatggt caggtttatt aggaatcatg atattgacat caacaccacc taatgccgca
    31561 attttaatag aatctaaaaa ggcttgatca ggtatgaaat agggagattg aatataaatc
    31621 gattttttag cagatgaaat cattttcaaa tagccgtatt taatctgttc ccattcttcg
    31681 tcaggaccac tagaagctat ttgaacgcca attgttccac cagaatttac atctgggaaa
    31741 taacgatcat cataggagat gtggtcacgt gtggcttgtg aattccaatc tagaataaat
    31801 cgtaattgca atgcattcac tgcatccccg acaattcgta aatgcgtatc tcgccaatag
    31861 ccgaattttt ttgatttacc taagtactca tcaccaacat taaaaccacc aacatatcca
    31921 atttgcccat ctattacaac aatttttcga tggtttcgat tgttcatacg caagttaatt
    31981 aaaggtaatt ttgatgggaa aaatgcttca gcatgtccac ctttattgcg aaacgggcgt
    32041 aagccttttt tacgcagtcc acgagaaccc atgtcatcat aaagaatttt aacttctaca
    32101 ccttgttccg cttttttacc aagttcattt aaaatggtac gacctaattc atcattttga
    32161 ataatatagt actgaaaatg aatataatca gtagcattac ggatgtcttg tattaggtca
    32221 tcaaattttt cttggccgtc tgtgtatatt tttaaatcgt tgtctgttgt taaaaatgct
    32281 gcgttattat ataacaacat ttgaatcatt tctttaaatt ttacaatttg ataattggaa
    32341 tttgaaaagt tttcattttt taaagcagct aattgctcat caacgattaa ctctaatcct
    32401 tttttatctt ccttatcaat tttgaaaatt tggtcacgtt gaatttgtcg tcctaatagt
    32461 aagtataaaa tgaagccgaa taaaggcaag aaaactaaga ctagtaacca agcccagata
    32521 gaattggcag aacgtctttc catgaaaata atggtaaagg cgaataataa gtttaaaata
    32581 aatgcaccaa taaatattga atttaaaata atattagaat gcttgagtgc aatggataat
    32641 aactctatca tttgaaacct cccatcgaaa atcttaaacg agtagtatat cttattaatt
    32701 gtatcatgaa gcaatttaaa tatcatgaca atttagtttg aaaaacacac tttgtgttga
    32761 cgttgtgttt tatgggatat agtatagtaa ggaatgtaaa tgaaggagtg aatgctatga
    32821 ctgaacaaga taatgcacat cattctgaac aaataaaaac gaatcttaaa tcacgtttaa
    32881 atcgaattga aggacaagtg agagcgatta atcgcatgat tgaagaagat gtctattgtg
    32941 atgatgtcct tacgcaaata agagcgacac gttcggcgtt aaacagtgtt gcgataaagt
    33001 tattagaaca acatatgaaa agttgtatta tgaataaagt taatcaaggt gctcaggaag
    33061 aggcaatgga agagttatta gtgacttttc aaaaattgat taaagactaa aggagtttaa
    33121 gatgatacat caaaatacga tttacacagc gggaattgaa acagaagaac aagtaagtca
    33181 attgacagaa cgcatttcaa atatgatagg tgttcatcaa gtgaatatta atataataga
    33241 tggtcaagta actgtatcgt atgagacacc agcaaatttg aatagtattg aaaaagaaat
    33301 ctatgatgaa ggatacaaaa ttgtatttta gggtataatg tagagtgcgc tatagatttt
    33361 aattttgaaa ataaattaaa aattttgtaa atgatgtagt aaaggtatgt cgaatagggt
    33421 aagataatat tgaaagcgat ccaaacgagg tgataataat gaaacgtcct gaaaagattc
    33481 aaaatgtagt caaactattg tcatcattag gtgtgaatat taaaaaaact aaatctcgtt
    33541 tagacattat taatactttg ccagcatcta ataaagtaag tcacgaatta aaataattga
    33601 ctgtgattgt gaatcacaca ccgttaaagc tatcgtcgga ctattcgatg atagcttttt
    33661 tgactggatt tactaaaatg aaagcaagta ctatataaca aaatccctct ttagagtgta
    33721 cattttacaa tgtgtacttc aaagagggat tgttattatc gagtaatatc tatatatgac
    33781 attttaaatc gacgacgtaa atagactata taacgtcatc ttgaaaagtt atgatatttg
    33841 aaactcaaaa tagtttaaat taattacttt ttggatggta taaatcgaca tatcgttttg
    33901 gttcatgata ataaattgat aagactatac ctattccagt catcatactc catagcgcac
    33961 taccaccata actaataaat ggtaatggaa taccagtgat tggtaacaac tgaattgtca
    34021 taccaatatt ttgtaaaata tggaacacaa gtaaagtgac gaaaccaacg ataaagattt
    34081 tgttaaattg atcttcaatt ttcgcagcta atcttattag atggaagatt aaaaataaaa
    34141 atattaagat caatatgaca gaaccgataa agccaagttc ctctccaatc actgaaaaga
    34201 taaagtcagt atgattttca ggtatataaa cttcaccgtg attgtatcct ttacctagta
    34261 actgtccaga accgatagct ttaagtgatt cagttaaatg atagccatca ccactactat
    34321 atgtataggg gtcaagccat gaattgattc gtcccatttg atacagttgg acacctaata
    34381 aattttcaat taatgcgggt gcatatagaa tacctaaaat gactgtcatt gcaccaacaa
    34441 tacctgtaat aaagataggt gctaagatac gccatgttat accacttact aacatcacac
    34501 ctgcaataat agcagctaat actaatgtag ttcctaggtc attttgcagt aatattaaaa
    34561 tacttggtac taacgagaca ccaataattt tgaaaaataa taacaaatca ctttggaatg
    34621 atttattgaa tgtgaattga ttatgtctag aaacgacacg cgctaatgct aaaattaaaa
    34681 taattttcat gaattcagat ggctgaatac tgatagggcc aaacgtgtac caacttttgg
    34741 caccattgat aataggtgta ataggtgact caggaataac gagcaagcct attaataata
    34801 gacagattaa gaaatacaat aaatatgtat aatgtttaat ctttttaggt gaaataaaca
    34861 tgatgatacc tgcaaaaatt gcacctaaaa tgtaataaaa aatttgtctg ataccgaaat
    34921 tagcactgta ttgaccaccg cccattgccg agttaataag cagaacactg aaaattgcta
    34981 aaacagctat agtggctact aatacccagt ctactttgcg aagccaatgc ttatccggct
    35041 gttgacgaga tgaataattc attgcaaact ccttttatac tcactaatgt ttatatcaat
    35101 tttacatgac tttttaaaaa ttagctagaa tatcacagtg atatcagcta tagatttcaa
    35161 tttgaattag gaataaaata gaagggaata ttgttctgat tataaatgaa tcaacataga
    35221 tacagacaca taagtcctcg tttttaaaat gcaaaatagc attaaaatgt gatactatta
    35281 agattcaaag atgcgaataa atcaattaac aataggacta aatcaatatt aatttatatt
    35341 aaggtagcaa accctgatat atcattggag gaaaacgaaa tgacaaaaga aaatatttgt
    35401 atcgtttttg gagggaaaag tgcagaacac gaagtatcga ttctgacagc acaaaatgta
    35461 ttaaatgcaa tagataaaga caaatatcat gttgatatca tttatattac caatgatggt
    35521 gattggagaa agcaaaataa tattacagct gaaattaaat ctactgatga gcttcattta
    35581 gaaaatggag aggcgcttga gatttcacag ctattgaaag aaagtagttc aggacaacca
    35641 tacgatgcag tattcccatt attacatggt cctaatggtg aagatggcac gattcaaggg
    35701 ctttttgaag ttttggatgt accatatgta ggaaatggtg tattgtcagc tgcaagttct
    35761 atggacaaac ttgtaatgaa acaattattt gaacatcgag ggttaccaca gttaccttat
    35821 attagtttct tacgttctga atatgaaaaa tatgaacata acattttaaa attagtaaat
    35881 gataaattaa attacccagt ctttgttaaa cctgctaact tagggtcaag tgtaggtatc
    35941 agtaaatgta ataatgaagc ggaacttaaa gaaggtatta aagaagcatt ccaatttgac
    36001 cgtaagcttg ttatagaaca aggcgttaac gcacgtgaaa ttgaagtagc agttttagga
    36061 aatgactatc ctgaagcgac atggccaggt gaagtcgtaa aagatgtcgc gttttacgat
    36121 tacaaatcaa aatataaaga tggtaaggtt caattacaaa ttccagctga cttagacgaa
    36181 gatgttcaat taacgcttag aaatatggca ttagaggcat tcaaagcgac agattgttct
    36241 ggtttagtcc gtgctgattt ctttgtaaca gaagacaacc aaatatatat taatgaaaca
    36301 aatgcaatgc ctggatttac ggctttcagt atgtatccaa agttatggga aaatatgggc
    36361 ttatcttatc cagaattgat tacaaaactt atcgagcttg ctaaagaacg tcaccaggat
    36421 aaacagaaaa ataaatacaa aattgactaa ctgaggttgt tattatgatt aatgttacat
    36481 taaagcaaat tcaatcatgg attccttgtg aaattgaaga tcaattttta aatcaagaga
    36541 taaatggagt cacaattgat tcacgagcaa tttctaaaaa tatgttattt ataccattta
    36601 aaggtgaaaa tgttgacggt catcgctttg tctctaaagc attacaagat ggtgctgggg
    36661 ctgcttttta tcaaagaggg acacctatag atgaaaatgt aagcgggcct attatatggg
    36721 ttgaagacac attaacggca ttacaacaat tggcacaagc ttacttgaga catgtaaacc
    36781 ctaaagtaat tgccgtcaca gggtctaatg gtaaaacaac gactaaagat atgattgaaa
    36841 gtgtattgca taccgaattt aaagttaaga aaacgcaagg taattacaat aatgaaattg
    36901 gtttaccttt aactattttg gaattagata atgatactga aatatcaata ttggagatgg
    36961 ggatgtcagg tttccatgaa attgaatttc tgtcaaacct cgctcaacca gatattgcag
    37021 ttataactaa tattggtgag tcacatatgc aagatttagg ttcgcgcgag gggattgcta
    37081 aagctaaatc tgaaattaca ataggtctaa aagataatgg tacgtttata tatgatggcg
    37141 atgaaccatt attgaaacca catgttaaag aagttgaaaa tgcaaaatgt attagtattg
    37201 gtgttgctac tgataatgca ttagtttgtt ctgttgatga tagagatact acaggtattt
    37261 catttacgat taataataaa gaacattacg atctgccaat attaggaaag cataatatga
    37321 aaaatgcgac gattgccatt gcggttggtc atgaattagg tttgacatat aacacaatct
    37381 atcaaaattt aaaaaatgtc agcttaactg gtatgcgtat ggaacaacat acattagaaa
    37441 atgatattac tgtgataaat gatgcctata atgcaagtcc tacaagtatg agagcagcta
    37501 ttgatacact gagtactttg acagggcgtc gcattctaat tttaggagat gttttagaat
    37561 taggtgaaaa tagcaaagaa atgcatatcg gtgtaggtaa ttatttagaa gaaaagcata
    37621 tagatgtgtt gtatacgttt ggtaatgaag cgaagtatat ttatgattcg ggccagcaac
    37681 atgtcgaaaa agcacaacac ttcaattcta aagacgatat gatagaagtt ttaataaacg
    37741 atttaaaagc gcatgaccgt gtattagtta aaggatcacg tggtatgaaa ttagaagaag
    37801 tggtaaatgc tttaatttca tagagattag tcgagggacc ttttacttat aaaaatgatt
    37861 tgaattaata ctaaaagatt acaaagaaga ggtggttttg tgtgtaaata caaaattgcc
    37921 tttttctttt tatgttaaat ctataaattt gaaactaaat caaggttaat tctatgtaca
    37981 cactttatat aggaagtagt ttgaatgttt atataatgtt ttacaaaaag atgtagtatt
    38041 ataatgtcta atttcacatg tgtttcagta aaatttgttg tggaatgtta acgatatacg
    38101 tattttataa aaaatttttt ataatgatta ttcgaatgat gcgtaacgct tacatcttat
    38161 ctaatgctag ctttttgaca aaaatatgac aatcaattaa tgtgattcta ataaatattc
    38221 gcaaattgct ttattgcgat taaatttttt tggtggtact atatagaagt tgatgaaata
    38281 ttaatgaact tatatgcaaa agtatattga gaaataaaca ggtaaaaagg agaattattt
    38341 tgcaaaattt taaagaacta gggatttcgg ataatacggt tcagtcactt gaatcaatgg
    38401 gatttaaaga gccgacacct atccaaaaag acagtatccc ttatgcgtta caaggaattg
    38461 atatccttgg gcaagctcaa accggtacag gtaaaacagg agcattcggt attcctttaa
    38521 ttgagaaagt agtagggaaa caaggggttc aatcgttgat tttagcacct acaagagaat
    38581 tggcaatgca ggtagctgaa caattaagag aatttagccg tggacaaggt gtccaagttg
    38641 ttactgtatt cggtggtatg cctatcgaac gccaaattaa agccttgaaa aaaggcccac
    38701 aaatcgtagt cggaacacct gggcgtgtta tcgaccattt aaatcgtcgc acattaaaaa
    38761 cggacggaat tcatactttg attttagatg aagctgatga aatgatgaat atgggattca
    38821 tcgatgatat gagatttatt atggataaaa ttccagcagt acaacgtcaa acaatgttgt
    38881 tctcagctac aatgcctaaa gcaatccaag ctttagtaca acaatttatg aaatcaccaa
    38941 aaatcattaa gacaatgaat aatgaaatgt ctgatccaca aatcgaagaa ttctatacaa
    39001 ttgttaaaga attagagaaa tttgatacat ttacaaattt cctagatgtt catcaacctg
    39061 aattagcaat cgtattcgga cgtacaaaac gtcgtgttga tgaattaaca agtgctttga
    39121 tttctaaagg atataaagct gaaggtttac atggtgatat tacacaagcg aaacgtttag
    39181 aagtattaaa gaaatttaaa aatgaccaaa ttaatatttt agtcgctact gatgtagcag
    39241 caagaggact agatatttct ggtgtgagtc atgtttataa ctttgatata cctcaagata
    39301 ctgaaagcta tacacaccgt attggtcgta cgggtcgtgc tggtaaagaa ggtatcgctg
    39361 taacgtttgt taatccaatc gaaatggatt atatcagaca aattgaagat gcaaacggta
    39421 gaaaaatgag tgcacttcgt ccaccacatc gtaaagaagt acttcaagca cgtgaagatg
    39481 acatcaaaga aaaagttgaa aactggatgt ctaaagagtc agaatcacgc ttgaaacgca
    39541 tttctacaga gttgttaaat gaatataacg atgttgattt agttgctgca cttttacaag
    39601 agttagtaga agcaaacgat gaagttgaag ttcaattaac ttttgaaaaa ccattatctc
    39661 gcaaaggccg taacggtaaa ccaagtggtt ctcgtaacag aaatagtaag cgtggtaatc
    39721 ctaaatttga cagtaagagt aaacgttcaa aaggatactc aagtaagaag aaaagtacaa
    39781 aaaaattcga ccgtaaagag aagagcagcg gtggaagcag acctatgaaa ggtcgcacat
    39841 ttgctgacca tcaaaaataa tttatagatt aagagcttaa agatgtaatg tcttgagctc
    39901 ttttttgttt tcaataattg attctctgta gatatcaaag tactaacgtt ttaaaggtta
    39961 aatatttaat tggattgaga tctgtatgcg gttatatcat tctgtgtaaa tatggttctc
    40021 caccaaatgt ggtgagtata taatttaaag aactattttt aaattaagaa taatcgaaca
    40081 taaataaact ttatgaaatt tcagtatcat gttcttataa aaaacaatag ggctttttgc
    40141 tgacgctagt gcgcgataaa taataagttg aatataaaaa agatcactgc caatcattcg
    40201 tttaatggca gcgatctttt ttatttaatt atttctcttt ccactgcaac atttgataac
    40261 caatgcgtgg atgtgtttta ataatatctt ttgcgtcctc atgacattgt gaaagttttt
    40321 gtcttaatga tgtcatatgc actcttaaac taggcatttc agtcttatta acatagccat
    40381 atattcgttt taatatcatc tcataagtga gtacttttcc tttatgattt gacaatagtt
    40441 ctaacaagct aaattcattt ggcgtcaaat gtacctcctg attattaata acaacagatt
    40501 tggagccaaa gtcgatgctt agcaaaccgt tagtaaatac aatgttagtt tcttgatgtg
    40561 acttagcgat tctctcgatg actcgtattc gtgcccgaag ctcatcaaca ttaaaaggtt
    40621 tagtcatata gtcattcgca ccgttatcta aagcttgaat aattgtttgt tcttcttgtc
    40681 ttgcacttat tacaatgata ggaatgtcag tatgttgcct gatttctgaa atcaaacata
    40741 atccatcttt atctggtaaa cctaaatcta ataaaatgac atctggttta tcaatttgaa
    40801 ttttaaagtg tgcttgtgtg gcattgtcgg ctgtagttac attgtaataa tctaaagtta
    40861 atgcaacatc aagtaaatgt gtgattgcgt gatcatcttc aattatcaat attttagatt
    40921 gcattatacg tctccttcgt taaagtctgt atatatattg aaatagaata tactgccgtg
    40981 tggttggttc ggtttatatt gtaagtttga ttgatgtttg tgtaggatag tctgtactaa
    41041 atataagcct agtcccatgc tttctttttg gttatcttta aaatatttat ttgatcctgt
    41101 gtaaaaaggc tcgaatatct tttgttgttc ttctaaacta attccaggtc cttcgtctat
    41161 aacggcaaat tcgatttgtt catagctagc ataacgaata gataaattga ttttggtgtc
    41221 agtagaagtg tgtttaactg cattttcaat caaattgaat aaagcttgta aaatcaactt
    41281 actgtcaatg tgtataaact gtaaatttac tgaggatgat acagttatac gcttttttaa
    41341 atggcgacgt tctaaaatca tatcgatttc ttctactaat tcactaacga gataaggttg
    41401 caattttatc tgaacatttg atgactgtaa ttttgttaat gataaaatat ttgtcactaa
    41461 tagatataaa tactgacttt cttgaaaact atgtacaagt aattgttcct tttctatgat
    41521 agacatatct ttactatgtg atactaaaat atctaaattt cccataattg ttgttaacgg
    41581 tgtacgtatg tcatgcgaaa ttgatcttaa aaaatttgaa tgtgtcagtt gacgttcagc
    41641 ctgtaacatg gattctctcg tttgtttaag taacgtcaca ttttcaacgg cgagagaaag
    41701 ttcatttaac attgattcta atattgatgc atcatatgga ttaatcactt gagaactttg
    41761 gtaatcaatg gctagaatgc ctttaatcgg agatgtgcca attggtatca accatttatt
    41821 aatgcctgga aatgtatctg ttgttgcacc agcttgtctt tcatttttaa ttacccagct
    41881 taatgcttgt tcatgctgtt gagtcgtatt atcgatatgg ttttgcaatg gtattgtttt
    41941 aattactttc gattgattga taacgtatat agtaattgat tgttgcaata attgattaat
    42001 ttggtatcca gcatttatta gtaagttttc aactgtataa gtttgtttaa tcgaatcatt
    42061 aaattgaaat aataaatctg tacgataaag ttgcttttta gtaatggagt attggaattt
    42121 aatttgtttt aataaagcac tcgttaaaat acttgttaaa atgctaacga taaatgtaat
    42181 aggatagtca aagcgatata cttcaaatgt atatctaggt tccgtaaaaa aataattaaa
    42241 aacaaatacg ttaataattg ctgctaaaaa gccaatgatg aaggaccgcg tccaaatgga
    42301 taataaaatg atgccgatga gaaaaatcat taaaataatc gtactagact catgcttatc
    42361 aagttgataa atccacagtc ccatcattac acaaattatt tgaatcaaaa tcatttttaa
    42421 catatctatg gcgaaacgtt tgcctttagg acgatagggt gatttgttca ttttcaattc
    42481 aacaggtatt tgtttgattg gaacgatttc gattttatag ctatgttcaa aggacattaa
    42541 atggtcaatt aaaggtgtat tgaaaaagtc tcgccactta tttctaatat gttgtccgat
    42601 aattaatttg gttacatctt gatttttaca ccattcgtct aatcctaatg caacggtttg
    42661 gctataaact acttttactt ttgctcctaa tgattttgca agcatgagat gttgatgcac
    42721 ttgcttttga ctatctttat attgcctgtt tttttcgaat acatctatat aaatagcagt
    42781 gaacttcgca tgttcttttt gagcaatatg gaatgcctct ttaattactg cttcattata
    42841 aatgctccca ctaattgcca cagcaatatg aggtttgagt gacgttttat ggttgtgtcg
    42901 gactttttct ttatcactca tcaagtcggc aactgttctt aacgtcaatg tacgcagttc
    42961 gcttaggtgg gcatacgtaa agaaattact aaatgctaca tctagcctat cctttttata
    43021 taccttgcca gcttttaagc gtttaattaa ttgttcaggt gagatatcta cgacttctaa
    43081 tacatcggcg ctcattatga aatagtcggg tacacgttct ttaacatgta caccggtcat
    43141 cagttcaatt tgactactta aactttcaat atgttgaatg ttcaaagtgg tatgaacatc
    43201 gataccatga tttaaaattt cttcaatatc catatatcgt ttctcatgac gatctctaga
    43261 aatattcgta tgtgctaact catcgataag tactattgtc ggcgattctt cgattatgcg
    43321 gtcgacatct aaatattgaa aatgatgact accatgttta gtaaaattgg ttgtgatttt
    43381 aggtaattgt tcagctaatg catttgtttc atcacgctga tgcggttcaa tatatcctat
    43441 tttaatatca acgttacttt gaaatagttc aatggcattt gaaagcatct caaatgtttt
    43501 accaacacct ggactgtaac cgatgtaaat tgttaaagat ccacgctttt ttcctatgtt
    43561 tagcgattca gtgtttgaca taaccttcac ctcgatagca atatcataat attcttcaca
    43621 attaaatgct ataaaattta tttctgcata cacatcttaa tgatttctta ataactaagt
    43681 ttgaaaatta atatttctct cataaacaag ttgttacgat gttgttgtgt tgtaaggagg
    43741 ttatggcaat gctcatcgtt ttattactgg tagttattgc attagttttg tatttatttt
    43801 atgccttaat tcgtagtgaa aaattttaga aatatattaa gtgagggtta tcatggaaat
    43861 aattttgttt ctaacaatga tggttatgat tacgtatgtt tttagtggat atctatatcg
    43921 cgtagcattg gtgcaatcgt caagagtaga tttaatattt actagatttg aaaatatgtg
    43981 ttttaaaatt atcggcacag atttagaaca catgtcagct aaaacatatg tcaaacattt
    44041 tctggcattt aatggattta tggggtttat aacatttgta ttgctaatag ttcagcaatg
    44101 gcttttttta aatccaaatc ataatttaaa ccaatcgata gatttagcgt ttaatacagc
    44161 aatatctttt ttaacaaata gtaatttaca acactataac ggtgaatcag atgtgacata
    44221 tttaacgcaa atgattgtaa tgacatattt aatgtttaca tctagtgcat caggttacgc
    44281 cgtttgtata gcgatgttga gacgtttaac tggattaact aatatcattg gtaattttta
    44341 tcaagatatt gttcggttta ttgtccgagt acttttacca ttatcatgtt taattagtat
    44401 tttattgatg actcaaggtg taccacaaac gttgcatgct aatttaatga ttcggacttt
    44461 aagcggacat attcaacata ttgcatttgg acctattgca tcacttgaat caataaaaca
    44521 tcttggtacg aatggtggag gatttttagc aggaaattct gcaacacctt ttgaaaatcc
    44581 aaatatttgg agcaatttta tagaaatggg cagtatgatg ttacttccta tgtcaatgtt
    44641 gttcttattt ggtcgcatgt taagtagaca tggtaaacga gtacatcgtc atgcgttgat
    44701 attatttgtc gcaatgtttt tcatttttat agcaattctt acattaacta tgtggagtga
    44761 gtatcgtggt aatccaatac tagcgaattt aggcatttat ggaccgaata tggaaggtaa
    44821 agaggtacgg tttggagcag gtttgtcagc actatttaca gttattacga cggcatttac
    44881 aacgggttct gttaataaca tgcatgatag cttaacgcct ataggtggat taggaccaat
    44941 ggtattaatg atgctaaatg ttgtatttgg tggcgaaggc gtaggactca tgaatttatt
    45001 gatatttgtc ttactgacgg tgtttatatg cagtttgatg gttggtaaaa caccagaata
    45061 tttaaatatg ccaattggcg cccgtgaaat gaaatgtatt gtcttagtct ttctcataca
    45121 cccaatttta attttagtat tttcagcact tgcttttatg attcctggag caagtgaaag
    45181 tataacgaat ccgtcttttc atggtatttc acaagttatg tatgaaatga catcagctgc
    45241 tgcgaacaat ggatcagggt ttgaaggact gaaagatgat acaacattct ggaatatctc
    45301 tacaggaatc attatgttgc tttctcgtta tataccaatt attttgcaat taatgattgc
    45361 atcaagttta gtgaataaaa aatcatacca tcaagataaa tatacaatag cgattgataa
    45421 accttatttt ggcgtatcac taatcgtatt tatcgtttta ctaagtggtt tgacatttat
    45481 tccagtacta ttacttggtc ctattggtga atttttaac
//
LOCUS       DALPQQ010000006        45108 bp    DNA     linear   BCT 22-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus strain K18-6-464
            SAMD00233528-rid16434743.denovo.006, whole genome shotgun sequence.
ACCESSION   DALPQQ010000006 DALPQQ010000000
VERSION     DALPQQ010000006.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMD00233528
            Sequence Read Archive: DRR236061
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 45108)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 45108)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001543423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001543423.1
            Genome Coverage       :: 77x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/22/2022 17:09:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,811
            CDSs (total)                      :: 2,743
            Genes (coding)                    :: 2,689
            CDSs (with protein)               :: 2,689
            Genes (RNA)                       :: 68
            rRNAs                             :: 2, 4, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 4, 2 (16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 54
            CDSs (without protein)            :: 54
            Pseudo Genes (ambiguous residues) :: 0 of 54
            Pseudo Genes (frameshifted)       :: 27 of 54
            Pseudo Genes (incomplete)         :: 27 of 54
            Pseudo Genes (internal stop)      :: 10 of 54
            Pseudo Genes (multiple problems)  :: 10 of 54
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..45108
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMD00233528-rid16434743.denovo.006"
                     /strain="K18-6-464"
                     /db_xref="taxon:1280"
                     /geo_loc_name="Japan: Niigata"
     gene            236..1108
                     /locus_tag="O7798_000286"
     CDS             236..1108
                     /locus_tag="O7798_000286"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501051.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MurR/RpiR family transcriptional regulator"
                     /protein_id="HDC2862566.1"
                     /translation="MSNVLTEIDSQYPYMTKNEKKIAKFILNSPQKVIKMRSQDLASL
                     LDISTSSVIRFSKKITDGGFHDLKINISKYVPKASSIYNVELMNNESTESLRTKLHTR
                     TTRALNHANNELNDKTIDQICHCLKRSETIFIYGFGASFVVATDLYQKLSRIGLNIQL
                     VQETHIFATLLATHNSNDSVILITNNGTQSEMQSMVKVIDDYHIPIITITSTRDNPVA
                     QASNIVLTYGKTDENEMHMGATTSLFAQMFTIDILYYRYVALNYHASLDFITQSKMAL
                     DNYRKHLSNINFKH"
     gene            complement(1495..2874)
                     /locus_tag="O7798_000287"
     CDS             complement(1495..2874)
                     /locus_tag="O7798_000287"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501052.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid permease"
                     /protein_id="HDC2862567.1"
                     /translation="MENNELQRGLSARQIQMIALGGTIGVGLFMGATSTIKWTGPSVI
                     LAYLIAGIFLFLIMRAMGEMIYLNPTTGSFATFASDYIHPAAGYMTAWSNIFQWIVVG
                     MSEVIAVGEYMKFWFPELPTWIPGVIAILLLMAANLFSVKAFGEFEFWFALIKVVTII
                     LMIIAGFGLIFFGFGNGGHAVGISNLWTNGGFMPNGIVGFFFALSIVIGSYQGVELIG
                     ITAGETKDPQKNIVKAVNGVIWRILIFYLGAIFVIVSVYPWNQLGDIGSPFVATFAKI
                     GITFAAGLINFVVLTAAMSGCNSGIFSASRMIYTLAHKGEMPKIFTKIMRNGVPLYTV
                     VAVSLGILIGALLNVILPLYIDGAKSIFVYVYSASILPGMIPWFMILFSHLRFRKLHP
                     EELEGHPFKMPGGAVTNYLTILFLILVLVGMVFNVETRISVLIGVIFLTIVTIYYFIR
                     YNKNNVKAK"
     gene            3154..3492
                     /locus_tag="O7798_000288"
     CDS             3154..3492
                     /locus_tag="O7798_000288"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001820359.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDC2862568.1"
                     /translation="MLKQILLRATKISVLFAVAFFIINYIGMEKPDILYLVGRTIIAT
                     LAFILICLTVFTIINSPERKIKLGTTLPIALIIGIIFGAIFLTVQIGVITGLIIGVIA
                     TFIWELIEKK"
     gene            3508..3693
                     /locus_tag="O7798_000289"
     CDS             3508..3693
                     /locus_tag="O7798_000289"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501054.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDC2862569.1"
                     /translation="MTTALIGVIVLILLIISFVPNYRAMKSAKEQGSNATRATIMVGI
                     DIILIVLIIVTLLLKYM"
     gene            complement(3789..3980)
                     /locus_tag="O7798_000290"
     CDS             complement(3789..3980)
                     /locus_tag="O7798_000290"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501055.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDC2862570.1"
                     /translation="MMGYIILFFLAGPVILGVGNLVIGPIFNKQTPFRVQVRSFVVGS
                     MIYLILATIGYFLLLQGKL"
     gene            complement(3991..4626)
                     /locus_tag="O7798_000291"
     CDS             complement(3991..4626)
                     /locus_tag="O7798_000291"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501056.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAD family hydrolase"
                     /protein_id="HDC2862571.1"
                     /translation="MYRAVIFDFDGTIIDTEQHLFNVINKHLEMHNADPISIDFYRSS
                     IGGAATDLHDHLIKAIGSENKDKLYEEHHLTSTTLPMIDTIKSLMAFLKQRHIPMAIA
                     TSSVKAEIMPTFKALGLDDYIEVVVGREDVEQVKPDPELYLSAVQQLNYMPTQCLAIE
                     DSVNGATAAIAAGLDVIVNTNKMTSAQDFSNVDYVAKDIDYDQIVARFFTK"
     gene            complement(4701..5618)
                     /locus_tag="O7798_000292"
     CDS             complement(4701..5618)
                     /locus_tag="O7798_000292"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501057.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bile acid:sodium symporter family protein"
                     /protein_id="HDC2862572.1"
                     /translation="MFQKLSIFATKSFLVWMLVAAVIGFIFPQHVATLGKWVPYLLGI
                     VMLGMGLTITPNDFKMVFKAPRAVIIGVCLQFSIMPTLAFIIAKSFHLPPDIAVGVIL
                     VGCCPGGTSSNVMSYLAKANVALSVSITTVSTLLAPFVTPALIYLFANEWLEVSFVSM
                     LWSVVQVVLIPIALGIVLQIINRKIAEKASTALPIISVVAISLILAIVVGGSKHQILT
                     TGLLIFLVVILHNVLGYTIGYWLARLLKLDRQDQKAVSIEVGMQNSGLAVSLAALHFN
                     PIAAVPGAVFSFIHNITGPILAKYWSKKL"
     gene            5886..6416
                     /locus_tag="O7798_000293"
     CDS             5886..6416
                     /locus_tag="O7798_000293"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501058.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDC2862573.1"
                     /translation="MLIDKFETYIINIAGLNDRTTRKKLSKLCKSVQFCDALQFSINK
                     QFNQYVLEISLPKQQLPYFISFLSFHQYSIFQVLSPKKINELLDSDNLYQSAKRFDIN
                     IDGLQDAFIKDKVIDIMNMFQNHTDITYTLNKSHAHIICTPEIFAKLLHTIATRNIDI
                     LSANYRSSSMSKARIS"
     gene            complement(6482..8086)
                     /locus_tag="O7798_000294"
     CDS             complement(6482..8086)
                     /locus_tag="O7798_000294"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501059.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS transporter subunit EIIC"
                     /protein_id="HDC2862574.1"
                     /translation="MNAIKRFGSAMIVPVLMFAFFGIVLGFATLFKNPTIMGSLADQH
                     TFWFKFWSVIESGGWVIFTHMEVVFVVGLPLSLAKKAPGHAALAALMGYLMFNTFINA
                     ILTQWPHTFGANLEKGVENVPGLKSIAGIATLDTNILGGIIISAIITWIHNRYYSKRL
                     PEMVGVFQGLTFVVTISFFVMLPLAAITCVIWPTVQHGIGSMQHFIIASGYIGVWLYH
                     FLERVLIPTGLHHFIYAPIEVGPVVVNHGLKAEWLQHLNEFAKSTKPLKEQFPYGFML
                     QGNGKVFGCLGIALAMYATTPKENRKKVAALLIPATLTAVVVGITEPLEFTFLFIAPY
                     LFVLHAVLAASMDTLMYAFGVVGNMGGGLLDFISTNWLPLGKEHWGTYVAQVIIGLIF
                     VAIYFFLFRFLILKFDIPLPGRKKTEEEVKLFSKQDYKNKKGDSVDSKRASSGNEYED
                     KAAYYLDGLGGKENIKDVTNCTTRLRLTVYDESKVADTEYFTHQQMAHGLVKSGKSIQ
                     VVVGMTVPQVREAFEQMVEDQSSEDK"
     gene            8416..9180
                     /locus_tag="O7798_000295"
     CDS             8416..9180
                     /locus_tag="O7798_000295"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501060.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MurR/RpiR family transcriptional regulator"
                     /protein_id="HDC2862575.1"
                     /translation="MFLDEHINRNFDKLNDNDLHIAHFINTHIDECKNMKIQDLAQFT
                     HASNATIHRFTRKLGFDGYSDFKSYLKFESNKTHQLPSNSIDSFKQEIDSTFSYLERV
                     DYQLLTKKMHTASTIYLYGTGRAQLNVASEAQRILLTLHNHVIVLHDEHELKMILNKS
                     EPNDLFFIISLSGETHELLEVTNLLQLRQKYFISVTTMKDNTLAQKANYNVYVSSNTF
                     YLTDGTDYSSFISYHIFFETLVRKYNEYLLHNDISN"
     gene            complement(9238..9744)
                     /locus_tag="O7798_000296"
     CDS             complement(9238..9744)
                     /locus_tag="O7798_000296"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501061.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SRPBCC domain-containing protein"
                     /protein_id="HDC2862576.1"
                     /translation="MAKFNVENEHVEVEIEKLYKFSPELVYEAWTKKDLLKQWFMTSA
                     RTNKEIEADVKEGGKYRIVDQQRNGKVNVIEGIYESLVMDEYVKMTIGMPGLSETQDV
                     IEVEFFERETGGTQMLFYYRSLVEKERRFTNLEYKQKKKEYHDAMVHGFELMFDKMYH
                     VIETSTQQ"
     gene            complement(9911..11224)
                     /locus_tag="O7798_000297"
     CDS             complement(9911..11224)
                     /locus_tag="O7798_000297"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020444780.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Na+/H+ antiporter NhaC family protein"
                     /protein_id="HDC2862577.1"
                     /translation="MEVHKKSNAWALFPLLLFVALFLGVGIITGDFTSMPLNVAITIT
                     VIVALLMNRKESFAKKVEVFTKGAGHSNIVLMMLIFILAGAFSNTAEKMGGVKSTVNL
                     GLSLIPENLIIVGLFVICMFVSISMGTSVGTVAAIAPVGYGFAQATDVPTALAMATVV
                     GGAMFGDNLSMISDTTIAAVRTQHTKMKDKFRVNFKIVLPGAILTIIILYFLTNGISL
                     NHAKNYDYNLIKVVPYILVLVLALLGVNVIIVLIGGTLLAGIIGLIDGSFGWMGLLDA
                     VSKGIISMEDIAMIALLIGGLVGIIQHNGGIEWLLQFVRSKVKSKRGAELGIASLVSV
                     ADIATANNTISIIMSGPLAKNIADEYDVDSRKSASILDIFGGCFQGLLPYSPQVISAA
                     GVAGISPLMLFPYSIYPILLGVCGLIAILFNFPKLKKNTSQEMKH"
     regulatory      complement(11301..11396)
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00162"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="SAM riboswitch class I; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /bound_moiety="S-adenosylmethionine"
                     /db_xref="RFAM:RF00162"
     gene            complement(11449..12018)
                     /locus_tag="O7798_000298"
     CDS             complement(11449..12018)
                     /locus_tag="O7798_000298"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501064.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDC2862578.1"
                     /translation="MALIVSRAILFLILALAFGIATVFPEQKLPLYIVFTLFVAVAIV
                     SNVWFTHQNVKKHIIKFNKYVAYFLSFVSGLLYIGFVIYTLTIGSYDVLPIIIFAISI
                     VLVQILENILGISIKNTRLSNKQLKVISKQRVQQFKVISLILVSVSIVFIFIALMLKW
                     WLLLVISIIVLIIITVAMIVYEKYYTTPD"
     gene            complement(12505..13386)
                     /locus_tag="O7798_000299"
     CDS             complement(12505..13386)
                     /locus_tag="O7798_000299"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501065.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HDC2862579.1"
                     /translation="MAAQDPRTKFKTTDYEKQEQEVPGLQSEMTPAPDCGETSYQGHQ
                     RLQGYKILVTGGDSAIGRAAAIAYAKEGADVAINYLPSEEQDAQEVRQVIEESGQKAV
                     LIPGDIRDEQFNYDLVEQAYQQLGGLDNVTLVAGHQQYHDDIHGFTTEAFTETFETNV
                     YPLFWTVQKALEYLKPGASITTTSSVQGYNPSPILHDYAASKAAIISLTKSFSEELGP
                     KGIRVNCVAPGPFWSPLQISGGQPQSKIPTFGQKTPLGRAGQPVELCGTYVLLASEES
                     SYTTGQVFGVSGGVQID"
     gene            complement(13497..14618)
                     /locus_tag="O7798_000300"
     CDS             complement(13497..14618)
                     /locus_tag="O7798_000300"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501066.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M20 peptidase aminoacylase family protein"
                     /protein_id="HDC2862580.1"
                     /translation="MGLKDQAVTWRRYFHQFPELSDKEFKTTQKIKDILTEHHIRILD
                     LPLATGLVAEVGQGLSCIAVRADIDALPIQELVEQDFKSENEGVMHACGHDIHMASIL
                     ATAVKLKEIEGTLTGRVKFIFQSAEELGHGAFKIIETHALKDVQAVLGFHNDPSRSVG
                     TFAIKTGAITSAVDRFEFHIKGVGGHAAKPEQCNDPVIVLAQLINSIQSIVSRNLSAF
                     DEAVVTIGQISCGNTWNVIADHAYVQGTVRSFDPVVRKLVETRLQDIADGLAQAYNMK
                     INLNYTHLPGAVMNDEALTHKAIAVAQHVGYKVEMMEQPLTIGEDFSGYSQHFPSVFA
                     LIGSHSEYDLHHPQYKPDERILEKVPEYFVEFVKRLLHE"
     gene            complement(14895..16133)
                     /locus_tag="O7798_000301"
     CDS             complement(14895..16133)
                     /locus_tag="O7798_000301"
                     /EC_number="3.5.2.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501067.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="imidazolonepropionase"
                     /protein_id="HDC2862581.1"
                     /translation="MNDLIINHIAELILPRSTDKPLKGKELDELNVVKNGTVVIKDGK
                     IVYAGTHTDDYDATETIDASGKVVSPALVDAHTHLTFGGSREHEMSLKRQGKSYLEIL
                     EMGGGILSTVNATRETSEDDLFKKAEHDLLTMIKHGVLAVESKSGYGLDRENELKQLK
                     VSNRLAEKYDLDMKHTFLGPHAVPKEASSNEAFLEEMIALLPEVKQYADFADIFCETG
                     VFTIEQSQHYMQKAKEAGFKVKIHADEIDPLGGLELAIDEQAISADHLVASSDKGKEK
                     LRNSDTVAVLLPATTFYLGKEDYADARGMLDNNGAIALATDYNPGSSVTNNLQLVMAI
                     AALKLKLSPNEVWNAVTVNAAKAIDINAGTINTGDKANLVIWDAPNHEYIPYHFGINH
                     AEKVIKDGKVIVDNTVSFKA"
     gene            complement(16133..17794)
                     /gene="hutU"
                     /locus_tag="O7798_000302"
     CDS             complement(16133..17794)
                     /gene="hutU"
                     /locus_tag="O7798_000302"
                     /EC_number="4.2.1.49"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501068.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="urocanate hydratase"
                     /protein_id="HDC2862582.1"
                     /translation="MRKIQAKKGLSIECKGWEQEAVLRMLYNNLDPEVAERPEDLVVY
                     GGIGKAARNWEAFEAIEKTLRELESDETMLVQSGKPVAVFKTHEEAPRVLISNSVLVP
                     EWANWDHFNELDKKGLIMYGQMTAGSWIYIGSQGIVQGTYETFAELGNQHFNGDLAGT
                     VTLTAGLGGMGGAQPLAITMNHGVAICVDVDETRVDKRIDTKYCDVKTADLDEALKLA
                     EEAKERGEGLSIGLVGNAVDIHQAILEKGFKIDIITDQTSAHDPLNGYVPQGYSVEEA
                     KVLREKDPKKYVELSQASMAKHVELMLEFQKRGAVAFDYGNNIRQVAFNNGVKNAFDF
                     PGFVPAYIRPLFCEGKGPFRFAALSGDPKDIERADEEMRKLFPENEKLLRWLDLAEEK
                     ISYQGLPSRIAWLGYGERAKMGLALNRLVRDGEISAPIVIGRDHLDAGSVASPNRETE
                     SMKDGSDAVGDWAVLNALINTAAGGSWISFHHGGGVGMGYSLHAGMVVVADGSERAER
                     RLERVLTTDPGMGVARHVDAGYDIAIQTAKEKGIHIPMIDKAGDK"
     gene            17954..18838
                     /locus_tag="O7798_000303"
     CDS             17954..18838
                     /locus_tag="O7798_000303"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501069.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HDC2862583.1"
                     /translation="MKIIQLEYFLAIVKYNSFTKAAQFLHISQPSLTATIKKMEADLG
                     YDLFTRSTKDIKITEKGIQFYRYASELVQQYRSTMEKMYDLSVTSEPRIKIGTLESTN
                     QWIANLIRKHHSDYPEQQYRLYEIHDKHQSIEQLLNFNIHLAITNEKITHEDIRSIPL
                     YEESYILLAPKETFKNQNWVDVENLPLILPNKNSQVRKHLDDYFNRRNIRPNVVVETD
                     RFESAVGFVHLGLGYAIIPRFYYQSFHTSNLEYKKIRPNLGRKIYINYHKKRKHSEQV
                     HTFVQQCQDYLYGLLEAL"
     gene            19080..19499
                     /locus_tag="O7798_000304"
     CDS             19080..19499
                     /locus_tag="O7798_000304"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501070.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FosB1/FosB3 family fosfomycin resistance
                     bacillithiol transferase"
                     /protein_id="HDC2862584.1"
                     /translation="MLKSINHICFSVRNLNDSIHFYRDILLGKLLLTGKKTAYFELAG
                     LWIALNEEKDIPRNEIHFSYTHIAFTIDDSEFKYWHQRLKDNNVNILEGRVRDIRDRQ
                     SIYFTDPDGHKLELHTGTLENRLNYYKEAKPHMTFYK"
     gene            complement(19755..20690)
                     /locus_tag="O7798_000305"
     CDS             complement(19755..20690)
                     /locus_tag="O7798_000305"
                     /EC_number="3.5.3.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501071.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="formimidoylglutamase"
                     /protein_id="HDC2862585.1"
                     /translation="MYKQGEPNLWTGRLDSETDPKKFRHFQTVTFEDLSKLEKSSMPS
                     GVGILGYAVDKGVALNKGRIGAKEGPDAIKQAFAGLPDLNQCETLVDYGNVYHDHEEL
                     IDTQKEFAMLAAKSIANHRQTFLLGGGHDIAYAQYLATRKVYPTQSIGVINIDAHFDT
                     RAEQQSTSGTSFRQILEEDENTDYLVLGIAQGGNTQSLFDYAKEKKIDYVFADELLSH
                     VSPTIKDMIERFVHEHDVIMFTICMDVIDSAFAPGVSAPAVLGLYPHTVLELAKRIIP
                     SDKVSSVSIAEMNPTYDADNRTAKLVANLVHHFLK"
     gene            20980..22239
                     /gene="sdpC"
                     /locus_tag="O7798_000306"
     CDS             20980..22239
                     /gene="sdpC"
                     /locus_tag="O7798_000306"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501072.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CPBP family intramembrane metalloprotease SdpC"
                     /protein_id="HDC2862586.1"
                     /translation="MKNNKISGFQWAMTIFVFFVITMALSIMLRDFQSIIGVKHFIFE
                     VTDLAPLIAAIICILVFKYKKVQLAGLKFSISLKVIERLLLALILPLIILIIGMYSFN
                     TFADSFILLQSTGLSVPITHILIGHILMAFVVEFGFRSYLQNIVETKMNTFFASIVVG
                     LMYSVFSANTTYGTEFAAYNFLYTFSFSMILGELIRATKGRTIYIATTFHASMTFGLI
                     FLFSEEIGDLFSIKVIAISTAIVAVGYIGLSLIIRGIAYLTTRRNLEELEPNNYLDHV
                     NDDEETNHTEAEKSSSNIKDAEKTGVSTASTVGVAKNDTENTVADEPSIHEGTEKTEP
                     QHHIGNQTESNHDEDHDITSESVESAESVKQAPQSDDLTNDSNEDEIEQSLKEPATYK
                     EDRRSSVVIDAEKHIEKTEEQSSDKNK"
     gene            complement(22305..22991)
                     /locus_tag="O7798_000307"
     CDS             complement(22305..22991)
                     /locus_tag="O7798_000307"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501073.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribose 5-phosphate isomerase A"
                     /protein_id="HDC2862587.1"
                     /translation="MKDVKALKLMTLNDVLSQINGDMTLGIGTGSTMELLLPQMAQLI
                     KERGYNITGVCTSNKIAFLAKELGIKICEINDVDHIDLAIDGADEVDPSLNIIKGGGG
                     ALFREKVIDEMASRFVVVVDETKIVQYLGETFKLPVEVDKFNWYHILRKIESYADIKV
                     ERRVNEDVAFITDNGNYILDCKLPKGIDPYKFHEYLIHLTGVFETGYFLDMADQVIVG
                     TQEGVKILEK"
     gene            23165..23818
                     /locus_tag="O7798_000308"
     CDS             23165..23818
                     /locus_tag="O7798_000308"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501074.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MOSC domain-containing protein"
                     /protein_id="HDC2862588.1"
                     /translation="MISIHAISTGKIQDLPYSSKRPMRSALDKTKISQTTWLSSTGFT
                     GDEQAYKDHGGPHKAVCGFSKHNYALYQDDLPTLPTHAMFGENLTFDYLDESDVYFGN
                     QYRLGEALIEVSEIREPCWKIQAKYNIPDLVKRMSTSGKTGFYFRVLKQGYVSPNDQL
                     YLIQEAPIEHRLSVQQLNDLYYNDRQNQDMLRYALNNPFLSPTRRDKLQKMYNRTLK"
     gene            complement(24054..25073)
                     /locus_tag="O7798_000309"
     CDS             complement(24054..25073)
                     /locus_tag="O7798_000309"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501076.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="galactose mutarotase"
                     /protein_id="HDC2862589.1"
                     /translation="MIVEVEHQRQGVDLIKIDNDETKIIFTNYGARVVSWKYHDNNIV
                     LGNVVEADKFYHSNPFKFGASIGRYSGRIDNAKFKLKGKEYQLEKNNGEHHLHGGCHG
                     LDNKLFDYEIRNEIAQIKVIFKTVLKSADDHFPGDIDVTITHIYDADHQWSIEYEAVA
                     SEDTLFSPTNHVYFNLNRDNNVVDNHRISSNQLDMYVLDERNIVTGDILDLHEVFEDN
                     KIKLSDIFTSQHAQLSQQMTRFGGLDHPFTVGEHKMYVENHEFMLEVDTDMPHVVFFT
                     FNQPDEWDSPFNIYKPHSGFTLETQFLPNDINLYGEKAPSILKAGEVFNSKTSFRIEE
                     KVEND"
     gene            complement(25103..25429)
                     /locus_tag="O7798_000310"
     CDS             complement(25103..25429)
                     /locus_tag="O7798_000310"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501077.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YnfA family protein"
                     /protein_id="HDC2862590.1"
                     /translation="MLYPIFIFILAGLCEIGGGYLIWLWLREGQSSLVGLIGGAILML
                     YGVIATFQSFPSFGRVYAAYGGVFIIMSLIFAMVVDKQMPDKYDVIGAIICIVGVLVM
                     LLPSRA"
     gene            complement(25478..25663)
                     /locus_tag="O7798_000311"
     CDS             complement(25478..25663)
                     /locus_tag="O7798_000311"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501078.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDC2862591.1"
                     /translation="MYLKNKIDESDTHLSYKMMMKACYSYFFIFSYRIMSKKVYNMNV
                     KTNFLKWECEVRRNVNK"
     gene            complement(25647..26879)
                     /locus_tag="O7798_000312"
     CDS             complement(25647..26879)
                     /locus_tag="O7798_000312"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501079.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HDC2862592.1"
                     /translation="MHKFWATFTLTYIKKIKAKSFVIFMIIIAALMIGLSNIDKIINM
                     FDDGPDKIGVAAPNEQIYKVFKQQANTFHSDAKFTKVSIEDAEKEVKKHKLDKAYIIK
                     VNQNRTLQGTIISEKRVSHEDSQKVQALLTAIQTNMVAGELNINKEDLQKLQAQSKVD
                     NKVISNDEVDKVSEGQKIFNYALAYGIIFLMFFIVLNYASQIAMEIASEKTSRVIEMI
                     ITSISPIQHIFAKILGVIAVAVTQIILIVLMAVICIFAFDLKDLLQGFNVEMNQLSWQ
                     IIIVGIISSIVGITAYVLLAAILGSLTSRIEDLNQSLMPLTLLGMIAFYIAIFTINNP
                     DGQLALITSYIPFLAPFQLVVRAQTSGLQIYEVILSSLISIVMVAVLIWIAIKTYKDS
                     VLTFERGLFNSMKRVFKK"
     gene            complement(26872..27771)
                     /locus_tag="O7798_000313"
     CDS             complement(26872..27771)
                     /locus_tag="O7798_000313"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501080.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HDC2862593.1"
                     /translation="MGLVIEHVTKRFGKMTAVNDISLKLESGKMLGFLGRNGAGKTTT
                     FRMILGLSEPTEGHITYNGKKLDKTMYNRIGYLPEERGLHGKLTVEEELKYLATLKGM
                     SKTEIQQQISYWLERFDITENRKKRIDSLSKGNQQKIQLLASMLHKPELLILDEPFSG
                     LDPVNVELLKEAVKDLNDWGSTIVYSSHRMEHVEELCDDVCILDKGQLVVSGDINHVR
                     ASNGNKKVVIESETTLPDLTNIRGIIHSENMKQGLQLTIENEDVAKDIYQVVAHQGYV
                     KRFQVVEPSLQDIFIEKVGGKDA"
     gene            complement(28002..28649)
                     /locus_tag="O7798_000314"
     CDS             complement(28002..28649)
                     /locus_tag="O7798_000314"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501081.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF805 domain-containing protein"
                     /protein_id="HDC2862594.1"
                     /translation="MEQLPQVGFMKSFVLFWKNYVNFKGRSRRSEYWYMALWHLILMV
                     PAVCVLIINLFLFFISIAADNETLIVMSILMIILTSVYTFVYSLATFIPNLALCVRRF
                     HDISRTMLFPMIMTVFSIIFYIVLQIIDSYYDSDFTLMPMGLNILLVLLYFVYLGLTI
                     VMIVFLCFDSKPANKYGESPKYPSTIKNQPVTSETPEKACTSETPKTPEETDNQL"
     gene            29048..29656
                     /locus_tag="O7798_000315"
     CDS             29048..29656
                     /locus_tag="O7798_000315"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501082.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-3-methyladenine glycosylase"
                     /protein_id="HDC2862595.1"
                     /translation="MDFVNNDTRQIAKNLLGVKVIYQDTTQTYTGYIVETEAYLGLND
                     RAAHGYGGKITPKVTSLYKRGGTIYAHVMHTHLLINFVTKSEGIPEGVLIRAIEPEEG
                     LSAMFRNRGKKGYEVTNGPGKWTKAFNIPRAIDGATLNDCRLSIDTKNRKYPKDIIAS
                     PRIGIPNKGDWTHKSLRYTVKGNPFVSRMRKSDCMFPEDTWK"
     gene            29993..31201
                     /gene="gltS"
                     /locus_tag="O7798_000316"
     CDS             29993..31201
                     /gene="gltS"
                     /locus_tag="O7798_000316"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501083.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sodium/glutamate symporter"
                     /protein_id="HDC2862596.1"
                     /translation="MIELNAITTLCLACILYLLGKAIVNHVNFLKRICIPAPVIGGLI
                     FAILVAALDSFGMVKIKLDASFIQDFFMLAFFTTIGLGASLKLFKLGGKVLLLYFMFC
                     AIISVIQNIVGVSLAKVLNIKPLLGLTAGSMSMEGGHGNAAAYGKTIQDLGIDSALTA
                     ALAAATLGLVFGGLIGGPVVKFLIKRYNLKPQHSDDTFKDYSQVAYNEHLHSKFNATE
                     VFFIQFTIVVFCMAVGSYFSHLFTAQTGINVPIYVGSLFVAVIVRNISESFNFNIVDL
                     KITNQIGDVALGIFLSLALMSIQLIEIYKLAIPLIIIVLVQVVVMILFAVLILFRGLG
                     KDYDAAVMVGGFIGHGLGATPNAMANLDVITKKYGNSPKAYLVVPIVGAFLIDLIGVI
                     VIMGFIQWFS"
     gene            complement(31249..32298)
                     /locus_tag="O7798_000317"
     CDS             complement(31249..32298)
                     /locus_tag="O7798_000317"
                     /EC_number="5.3.3.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501084.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type 2 isopentenyl-diphosphate Delta-isomerase"
                     /protein_id="HDC2862597.1"
                     /translation="MSDFQREQRKNEHVEIAMAQSDAMHSDFDKMRFVHHSIPSINVN
                     DIDLTSQTPDLTMAYPVYINAMTGGSEWTKNINEKLAVVARETGLAMAVGSTHAALRN
                     PRMAETFTIARKMNPEGMIFSNVGADVPVEKALEAVELLEAQALQIHVNSPQELVMPE
                     GNREFVTWLDNIASIVSRVSVPVIIKEVGFGMSKELMHDLQQIGVKYVDVSGKGGTNF
                     VDIENERRANKDMDYLSSWGQSTVESLLETTAYQSEISVFASGGLRTPLDAIKSLALG
                     AKATGMSRPFLNQVENNGIAHTVAYVESFIEHMKSIMTMLDAKNIDDLTQKQIVFSPE
                     ILSWIEQRNLNIHRG"
     gene            complement(32329..33276)
                     /gene="corA"
                     /locus_tag="O7798_000318"
     CDS             complement(32329..33276)
                     /gene="corA"
                     /locus_tag="O7798_000318"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501085.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="magnesium/cobalt transporter CorA"
                     /protein_id="HDC2862598.1"
                     /translation="MALKIRYQTTYEPFKVVDDIKEIPKDATIVWYDFDEPNEQENEW
                     FKAHFNFNDLEVDDAINGMPRAKYKSYKDYQYLVFHSIMGSNYSPIALNIFIQDNVLV
                     TYHHQTLESLNKVVYKYMNTLDAELDCADVVILILDIMVDKYFNFVYALEDSVYHFED
                     RHVDDRFNKMVMDSVFKLRSDLIKVKRVLFPMQELIDTMKQNGDLIIDNKHSLYIQHI
                     DDHLIKQRNIIRTAQEMTNEIRENFESYTSFRMNSIMQVLTLVSVIFSPLTFIAGIYG
                     MNFVNMPALHLHYGYYICLAVMFVIAVVLIIFFRRKKWF"
     gene            33373..33864
                     /locus_tag="O7798_000319"
     CDS             33373..33864
                     /locus_tag="O7798_000319"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501086.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thioesterase family protein"
                     /protein_id="HDC2862599.1"
                     /translation="MVIIKQLFTHTQTVTSEFIDHNNHMHDANYNIIFSDVVNRFNYS
                     HGLSLKERENLAYTLFTLEEHTTYLSELSLGDVFTVTLYIYDYDYKRLHLFLTLTKED
                     GTLASTNEVMMMGINQHTRRSDAFPESFSTQIAHYYKNQSTITWPEQLGHKIAIPHKG
                     ALK"
     gene            33861..34280
                     /locus_tag="O7798_000320"
     CDS             33861..34280
                     /locus_tag="O7798_000320"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501087.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDC2862600.1"
                     /translation="MTDALQQKIHIELLDLLDDVKFELTELNAQKGLYINGPANQLLK
                     RGVHMAYVQGQKQAIDNIMTIVEQQLEDQHFLEHYDKFQNEVAHRNYDKTANFAELSD
                     IPRQFDNFLDQFYQIKGQYFIITHINTLIGDFHSEAH"
     gene            complement(34388..35308)
                     /locus_tag="O7798_000321"
     CDS             complement(34388..35308)
                     /locus_tag="O7798_000321"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000620861.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HDC2862601.1"
                     /translation="MIRNRVMNSVVNKYLLHNRSIMFKNDQDVERFFYKREIENRKKH
                     KQPSTLNVKANLEKLSLDDMQVFRFNFRHQIDKKILYIHGGFNALQPSPFHWRLLDKI
                     TLSTLYEVVLPIYPKTPEFHIDDTFQAIQRVYDQLVSEVGHQNVVVMGDGSGGALALS
                     FVQSLLDNQQPLPNKLYLISPILDATLSNKDISDALIEQDAVLSQFGVNEIMKKWANG
                     LPLTDKRISPINGTIEGLPPVYMFGGGREMTHPDMKLFEQMMLQHHQYIEFYDYPKMV
                     HDFPIYPIRQSHKAIKQIAKSIDEDVTQNN"
     gene            35516..36154
                     /locus_tag="O7798_000322"
     CDS             35516..36154
                     /locus_tag="O7798_000322"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501089.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDC2862602.1"
                     /translation="MTNPNQRLEPFDETFQQPNIHRGKRYGKKKRSLVSMIIQIIVVI
                     LTAIAGYSMWKQPIFNIVFTKESVDFDGIKNFNETIGKMHQLNINLGNINDLQQGIDR
                     LILVFNGFFILCIVSLVITILTIVFNRTVLKVVNILVLTIMLVITLYFSYIIKALAQE
                     IADVFKKYYLNVPPDQVITEADAIHNGIILLGCSIGLLVISLFFRNRMPRLK"
     gene            complement(36400..38331)
                     /locus_tag="O7798_000323"
     CDS             complement(36400..38331)
                     /locus_tag="O7798_000323"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501090.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DHA2 family efflux MFS transporter permease
                     subunit"
                     /protein_id="HDC2862603.1"
                     /translation="MTTTFIISYIILALIIVGVINLFLIRSRKKGKRQQKEQQFTTRQ
                     SNQSKFKASDLDKTTDQSTQRMTHEELRVDNQDDHSQVSLNGYTKGSEKDQEAFTNNK
                     DEEAVAAKNPESEEYKVNEKIKKEHKNFIFGEGVSRGKILAALLFGMFIAILNQTLLN
                     VALPKINTEFNISASTGQWLMTGFMLVNGILIPITAYLFNKYSYRKLFLVALVLFTIG
                     SLICAISMNFPIMMVGRVLQAIGAGVLMPLGSIVIITIYPPEKRGAAMGTMGIAMILA
                     PAIGPTLSGYIVQNYHWNVMFYGMFIIGIIAILIGFVWFKLYQYTTNPKADIPGIIFS
                     TIGFGALLYGFSEAGNKGWGSVEIETMFAIGIIFIILFVIRELRMKSPMLNLEVLKFP
                     TFTLTTIINMVVMLSLYGGMILLPIYLQNLRGFSALDSGLLLLPGSLIMGLLGPFAGK
                     LLDTIGLKPLAIFGIAVMTYATWELTKLNMDTPYMTIMGIYVLRSFGMAFIMMPMVTA
                     AINALPGRLASHGNAFLNTMRQLAGSIGTAILVTVMTTQTTQHLSAFGEELDKTNPVV
                     QDHMRELASQYGGQEGAMKVLLQFVNKLATVEGINDAFIVATIFSIIALILCLFLQSN
                     KKAKATAQKLDADNSINHE"
     gene            complement(38344..38991)
                     /locus_tag="O7798_000324"
     CDS             complement(38344..38991)
                     /locus_tag="O7798_000324"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501091.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HlyD family secretion protein"
                     /protein_id="HDC2862604.1"
                     /translation="MKKMILINVITVVVLLAIGIAGFYFWNKTTSYVTTDNAKVNGDQ
                     IKIASPASGQIKSLNVKQGDKLDKGDKVAIVTVQGQDGETKDMDLKMPQKGTIAKLDG
                     MEGSMVQAGNPIAYAYNLDDLYVTANIDEKDIKDVEVGKDVDVTIDGQKASIKGKVDS
                     IGKATAASFSLMPSSNSDGNYTKVSQVIPVKITLESEPSKQVVPGMNAEVKIHKN"
     gene            39112..39663
                     /locus_tag="O7798_000325"
     CDS             39112..39663
                     /locus_tag="O7798_000325"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501092.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TetR/AcrR family transcriptional regulator"
                     /protein_id="HDC2862605.1"
                     /translation="MKRQAKIEIQNALVDLMAEYPFQEISTKMICAYCNINRSTFYDY
                     YKDKFDLLDTINSKHKEKFQFLLSALHHNFENIKQDKLKLYKFFIIIAKYIKHNEQFF
                     KDILVTYPMKTLFIDYINLARDYYQQIMNDYSTTVTNKQLYVTYIIGGQAGVFINWLS
                     NGCNESPEEVADILLANTIKLQN"
     gene            complement(39893..41101)
                     /locus_tag="O7798_000326"
     CDS             complement(39893..41101)
                     /locus_tag="O7798_000326"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000999124.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug effflux MFS transporter"
                     /protein_id="HDC2862606.1"
                     /translation="MNDLTHFNKRSPIFIIILGSLTAIGALSIDMFLPGLPDIRHDFQ
                     TTTSNAQLTLSMFMIGLAFGNLFAGPISDSTGRRKPLIIAMIIFTLASLGIVFVHNIW
                     LMVALRFLQGVTGGAAAVISRAIASDMYSGNELTKFMALLMLVNGIAPVVAPTIGGII
                     LNYSVWRMVFVILTIFGFVMVIGSLLKVPESLTVTNRESSSGLKTMFKNFKILLKTPR
                     FVLPMLIQGMTFVILFTYISASPFIIQKIYGMTAIQFSWMFAGIGITLIISSQLTGYL
                     VDFIDSQKLMRGMTMIQIIGVILVTIVLLNHWNFWILAIGFIILIAPVTGVATLGFTI
                     AMDESSSGRGSSSSLLGLVQFLFGGVASPLVGVKGEDNPIPYIIIIIATAVILIILQI
                     YNMKVFKTNR"
     gene            complement(41211..41339)
                     /locus_tag="O7798_000327"
     CDS             complement(41211..41339)
                     /locus_tag="O7798_000327"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501095.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDC2862607.1"
                     /translation="MEYKQHPFKVFTISVNYFEGIVFCGKIYEVLRFISFYTFYKL"
     gene            complement(41370..42752)
                     /locus_tag="O7798_000328"
     CDS             complement(41370..42752)
                     /locus_tag="O7798_000328"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501096.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDC2862608.1"
                     /translation="MKSCPKCGQQAQDDVQICTQCGHKFDSRQALYRKSTDEDIQTNN
                     IKMRKMVPWAIGFFILILIIILFFLLRNFNSPEAQTKILVNAIENNDKQKVATLLSTK
                     DNKVDSEEAKVYINYIKDEVGLKQFVSDLKNTVHKLNKSKTSVASYIQTRSGQNILRV
                     SKNGTRYIFFDNMSFTAPTKQPIVKPKEKTKYEFKSGGKKKMVIAEANKVTPIGNFIP
                     GTYRIPAMKSTENGDFAGHLKFDFRQSNSETVDVTEDFEEANISVTLKGDTKLNDSSK
                     KVTINDHEMAFSSSKTYGPYPQNKDITISASGKAKDKTFTTQTKTIKASDLKYNTEIT
                     LNFDSEDIEDYVEKKEKEENSLKNKLIEFFAGYSLANNAAFNQSDFDFVSSYIKKGSS
                     FYDDVKKRVSKGSLMMISSPQIIDAEKHGDKITATVRLINENGKQVDKEYELEQGSQD
                     RLQLIKTSEK"
     gene            complement(42992..43447)
                     /locus_tag="O7798_000329"
     CDS             complement(42992..43447)
                     /locus_tag="O7798_000329"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017804647.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MarR family transcriptional regulator"
                     /protein_id="HDC2862609.1"
                     /translation="MVKHLQDHIQFLEQFINNVNALTAKMLKDLQNEYEISLEQSNVL
                     GMLNKEPLTISEITQRQGVNKAAVSRRIKKLIDAKLVKLDKPNLNIDQRLKFITLTDK
                     GRAYLKERNAIMTDIAQDITNDLNSEDIENVRQVLEVINHRIKTYSNHK"
     gene            43642..44610
                     /locus_tag="O7798_000330"
     CDS             43642..44610
                     /locus_tag="O7798_000330"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501100.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YdcF family protein"
                     /protein_id="HDC2862610.1"
                     /translation="MLLNLLLIFILIVICPLIFNYTLTLNLTCYILVVISIFLSLIYS
                     IMTYTFPWSMFVTFIIISIIMLFKHRYLFSHTSSRLFIKKLLSFSYKFVLYTSALLFI
                     STIQSPIVKGLSMWLAILCLSLLLTFICYLVWTVSYRHRSYNKEVDIIIVLGAGIFTE
                     FVTPMLAARLDRALDIYQQQASATKIIVSGGQGPDEPISEALAMQRYLIAHGVDKTDI
                     LMESHSINTYTNFLYSKQIINNLYHEAVKIVCVTSQFHVLRALRLAQKLGLSIDGVGS
                     HTPYHFFLHVLIKDYLGVMYQYRLLLTLYCSSSWFICLYAAFIYNS"
BASE COUNT        14948 a         8407 c         6296 g        15457 t
ORIGIN      
        1 agtatgactt acggtaatat atcaatatat tgatatatta tttgcacatg ggagtatgct
       61 attttttatc tatacatctt aaaaaaattt acagttttac aattcaatat cattaaacaa
      121 acaacatatt cagcttattt ttcattctct tacgttacaa gttgtaaata ccatcgcgtt
      181 aaacaacaat agccaacgct aataaaatat attgcgttaa agtggagtga ttaatatgtc
      241 aaacgtacta acagaaatag atagtcaata tccatatatg actaaaaatg aaaaaaagat
      301 agctaaattt atactaaatt cacctcaaaa ggtgattaaa atgaggtctc aagacttagc
      361 aagcttatta gatattagta catcatcagt cattcgattc agcaagaaaa ttactgatgg
      421 cggttttcac gacttgaaaa taaatatatc taaatatgtt cctaaagcat catcaattta
      481 caatgttgaa ttaatgaata acgaaagcac agaatcttta agaactaaac tccatacacg
      541 tactacacgc gcacttaatc atgcaaataa cgaattaaat gataaaacta ttgatcaaat
      601 atgtcattgt ttaaaacgtt ctgagacgat ttttatatat ggttttggcg catcttttgt
      661 agttgctacc gacttatacc aaaagttatc aagaataggt cttaatattc aacttgttca
      721 agaaacacat atttttgcta cattattagc aactcacaat tcgaacgaca gtgttattct
      781 tattactaac aatggtacgc aaagtgaaat gcaatcaatg gttaaagtta ttgatgacta
      841 ccatatacct ataattacaa ttactagtac aagggataat cccgtagcac aggcatcaaa
      901 tattgtttta acttatggga aaactgatga aaatgagatg catatgggag caacaacttc
      961 attatttgct caaatgttca ctattgatat tttatattat cgttatgttg cattaaatta
     1021 tcacgcatca ttagatttca taacacaatc taaaatggct ttagataact atcgtaaaca
     1081 tttatcaaat attaacttta aacattaaca gtcttatata aattctttaa tcatgtcata
     1141 taataattta tgcatcattt tcaaagctta catgtctttt atcttgtata acatacgcat
     1201 atgaccaatg atttgataag gccattcaat ttcttatatt aaaaacaaac gcagttgatt
     1261 aacggattca ttccatatat caattgcgtt tgttatttta ataatgctat tttttatttt
     1321 aaagcccaca gtaaaaacta acgataatat tgccacttat aagtttttca cactacaact
     1381 tcgatttaag ctatatttat aaaaaaatgc gcctactcat aacattcttt ggctatttaa
     1441 ctttaataag ctagggccaa gtttgtcata agataagcgc acattataat catactattt
     1501 tgcttttaca ttatttttat tatatctaat aaaataataa atcgttacaa tcgttaagaa
     1561 gatgacacca ataagcactg atattctagt ttcaacatta aataccatac caaccaatac
     1621 taatattaag aataagattg ttaaatagtt agttactgcg ccaccaggca ttttgaatgg
     1681 gtgaccttcc aattcttcag ggtgtaattt tctaaaacgt aaatgactga ataaaatcat
     1741 aaaccaagga atcatacctg gtaaaataga cgcactataa acgtatacga aaatactctt
     1801 cgctccatcg atatataaag gtaaaattac gtttaataaa gcaccaatta aaataccaag
     1861 agatactgct acaacagtgt acaatggtac accatttctc atgattttag taaatatttt
     1921 cggcatttca cctttatgag caagtgtata aatcatacga ctcgcactga aaatacctga
     1981 gttacatcct gacattgctg cagttaatac aacaaagtta attaatccag ctgcaaatgt
     2041 aataccgatt ttagcaaatg ttgcaacaaa cggacttcca atgtctccta attgattcca
     2101 aggatacact gaaacaataa caaaaatagc gcctaaatag aaaattaaaa ttctccagat
     2161 aacaccattc actgctttaa cgatattttt ctgaggatct ttagtttcac ctgccgtaat
     2221 acctatcagt tccacacctt ggtatgaacc aattacaatt gataatgcaa agaagaaacc
     2281 aacaatacca tttggcataa atccgccatt tgtccataga ttagaaatac ctaccgcatg
     2341 gccaccattt ccaaaaccaa agaaaataag accaaaacca gcaataatca ttaaaataat
     2401 tgttacaact ttaattaaag caaaccaaaa ttcaaattct ccaaacgctt ttaccgagaa
     2461 taaattcgct gccattaata ataaaatagc aataacacca ggaatccaag ttggcaattc
     2521 cgggaaccaa aacttcatat attctcctac tgcgatgacc tcactcatac caactacaat
     2581 ccattggaat atattactcc atgctgtcat ataacctgct gcaggatgta tataatcact
     2641 tgcaaatgtt gcaaatgatc ctgttgtagg gtttaaataa atcatttccc ccattgctct
     2701 catgattaaa aataaaaaga tacccgcaat taaatatgca aggataactg atgggcctgt
     2761 ccatttaatt gtacttgtcg cacccatgaa aagccccacg ccaatcgtac caccaagtgc
     2821 aatcatttga atttgacggg cactcaatcc cctttgtagt tcattgttct ccataacttc
     2881 ttaccccatc tctgattgat actaaataaa tccataaaaa aacttattgc cgtaattata
     2941 ctataaatta tcgattttgg tacattaata tttgcatacc atgcaatcgt ttacagaact
     3001 actatagcag gcttttgcaa ctttgcaaac aattattttg tgatttttct aaaaaattaa
     3061 aaaagttgct caagtaccgt tgagtcacat acaacttcag ctattcttgg taattatgat
     3121 ataattttaa taatattaaa aaggagtata tcaatgttaa aacaaatact gctacgtgct
     3181 acaaaaatat cggtactctt tgctgtagca tttttcatca taaattatat cggtatggaa
     3241 aaacctgaca tcctatattt agttggaaga actattattg caacacttgc tttcatactc
     3301 atttgtctta cagtatttac tattattaat tctccagagc gcaagattaa actcggtacg
     3361 actttaccga ttgcattaat tattggtatc attttcggcg ccatattttt aacggtacaa
     3421 atcggtgtca tcactgggtt aatcatcggt gtgattgcta cgtttatttg ggaattgatt
     3481 gaaaaaaaat aaaggaggtc gttcatcatg acaacagcat taattggtgt aattgtatta
     3541 atcttactaa ttattagctt tgtgccaaac taccgtgcta tgaaatcagc aaaagaacaa
     3601 ggaagtaatg caacaagagc tacaattatg gtaggcatag atattatctt aattgtactt
     3661 atcatcgtga cgttattatt aaaatatatg taactattta aaccacccta tctcatacat
     3721 aaacatgaac gttctaccat ttcacataca tatggtcgtc catttaatga ggtaaggtgg
     3781 ttttctcgtt aaagtttacc ttgtaatagt aaaaaatagc caattgttgc gagtattaag
     3841 taaatcattg aaccaacaac aaaagatctt acttgcacgc gaaatggtgt ctgtttgtta
     3901 aatataggac caatcaccaa atttccaacg cctaaaatta ctggaccagc tagaaaaaac
     3961 aatataatgt aacccatcat gatacgcctc ctatttcgta aagaaacgcg ctacaatttg
     4021 atcgtaatca atatcttttg ctacataatc tacattagaa aagtcctgtg cgcttgtcat
     4081 tttattcgta ttaacaataa catctaatcc agctgcaatc gcggctgttg caccatttac
     4141 agaatcttca atagccaaac attgtgtcgg catataattt aattgttgta ctgcagataa
     4201 atataattca gggtcaggtt taacttgttc aacatcttct ctaccaacaa ctacctctat
     4261 ataatcgtct agacctaatg ctttaaaggt gggcattatt tccgctttca cactacttgt
     4321 ggcaattgcc ataggaatgt gacgttgctt taaaaatgcc atcaatgatt taatcgtatc
     4381 aatcatcggt aatgttgtac tagtaagatg atgttcttca taaagtttat ctttattttc
     4441 cgaaccaatc gctttaatta aatggtcatg caaatctgta gctgctcctc caatagaaga
     4501 acgataaaaa tcaatgctta taggatcggc attatgcatc tctaaatgtt tattaataac
     4561 attaaataaa tgttgttccg tatctattat tgttccatcg aaatcaaata taactgctct
     4621 atacatatat ttactcctct attttttctc tttatcaaag cttaacatag tccgatgacc
     4681 acttcattct attagtgcaa ttataacttt tttgaccaat actttgctaa aataggccct
     4741 gttatattat gaatgaaact aaacactgcg cctggtactg ctgcaattgg attaaaatgc
     4801 aatgctgcta atgacacagc taaaccagag ttctgcattc caacttcaat actgactgct
     4861 ttttgatctt gtcgatctaa ttttaaaaga cgagctaacc aatatccaat cgtataccct
     4921 aatacgttat gtaaaataac tactaaaaat attaataatc ctgtagttaa gatttggtgc
     4981 ttactgccac ctacaactat tgctaaaatt aatgaaatag caacaactga tataattggc
     5041 aaagctgtag aagctttttc agcaatttta cgattaataa tttgcaaaac aatacctaaa
     5101 gcaattggaa ttaatacaac ttgaacaact gaccacaaca tactcacgaa agatacttcc
     5161 aaccattcat ttgcaaatag atatattaac gcaggtgtaa cgaatggcgc tagcaacgta
     5221 gagaccgtcg taatagaaac agaaagtgct acgttagctt tggctaaata actcattaca
     5281 ttacttgatg tcccacccgg acaacatcca actaatatta cgccaacagc aatatcaggt
     5341 ggtaaatgaa aagactttgc aattataaat gctaatgtgg gcataatact gaattgtaga
     5401 cagacaccaa taattactgc tctaggtgct ttaaagacca ttttgaaatc attaggtgta
     5461 attgttaatc ccatacctaa cataacaata ccaagtaaat aaggtaccca tttacctaat
     5521 gtcgcaacat gttgtgggaa aataaatcca ataacagctg ctactaacat ccataccaaa
     5581 aaactcttcg tggcaaatat actcaatttt tgaaacattg ttaacacatc ctcgtcgata
     5641 atattgaaaa atattaccat aagaccagta aggttacaat tacttttctg aaaattaaga
     5701 ttatttagtc attctcttct tattgcaaat attttatcac tgataaacaa ttattttaaa
     5761 cttcattcaa gagtcttagt gaataaagaa aaaaagcgtg gtaaaatcaa cttgaacaaa
     5821 attaagtcac ctttataaat attaaacgtg tatttaatgc catgtattcc tcgggaggtc
     5881 ctcacatgtt aattgataaa ttcgaaacat acatcatcaa catcgccggt ttaaatgacc
     5941 gtactactag aaaaaaatta agtaagttat gcaaaagtgt acaattttgt gatgcgttgc
     6001 aattctcaat aaacaaacag tttaatcagt atgtattaga aattagctta ccaaagcaac
     6061 aacttccata cttcatttca tttttaagtt ttcatcagta tagtattttc caagtacttt
     6121 caccaaagaa aataaatgaa ttacttgatt ctgataattt atatcaatct gcaaagcgtt
     6181 tcgatatcaa tattgatggc ttgcaagatg ctttcattaa agacaaagtc atcgatatta
     6241 tgaatatgtt ccaaaatcac actgatatca cttatacgtt gaataagtct catgcacata
     6301 ttatatgtac gccagaaata tttgctaaat tgttacatac gattgcaact agaaatatcg
     6361 acattctatc tgccaattat agatcgtcat ctatgagcaa agctcgtata tcataataaa
     6421 agacacatct atacgatgat catttacaat gattgcgtat agtgatgtgt ctttttttgt
     6481 attatttatc ttcggacgat tgatcctcaa ccatttgttc aaatgcttca cgaacttgtg
     6541 gtactgtcat acctactaca acttggatac tcttaccact ctttactaat ccgtgtgcca
     6601 tttgttgatg cgtgaaatat tccgtatctg caactttact ttcatcataa acagttaagc
     6661 gtaatcttgt tgtacagtta gtaacatctt tgatattttc tttgccgcct aaaccgtcga
     6721 ggtaatatgc agctttgtct tcgtattcat taccagatga agcacgttta gaatctacgc
     6781 tatcaccttt tttatttttg taatcttgct tagaaaataa tttaacttcc tcttctgttt
     6841 tcttacgtcc aggtaatgga atatcaaatt tcaaaattaa gaatctgaat aagaagaagt
     6901 aaatcgctac aaatatcaga ccgataataa cttgtgcaac ataagtaccc caatgttctt
     6961 tacctaatgg caaccagttt gttgaaataa agtctaacaa gccaccaccc atgttaccta
     7021 caacaccaaa tgcgtacatt aaagtatcca ttgatgctgc taaaactgcg tgtaaaacaa
     7081 ataagtatgg tgcgatgaat aagaatgtaa actctaatgg ctcagtaata cctacaacga
     7141 ctgctgttaa tgtggcagga ataagtagtg ccgccacctt tttacgattt tctttaggtg
     7201 tcgtagcata cattgctaaa gcaataccta aacatccaaa tactttccca tttccttgaa
     7261 gcataaagcc ataagggaat tgctctttta atggcttagt actcttagca aactcattta
     7321 aatgttgtaa ccattcagct ttcaagccgt gattgactac tactggtcca acttcaattg
     7381 gtgcataaat aaagtgatgt aatcctgttg gtattaatac acgttctaag aagtgataca
     7441 accatacacc gatatagcct gaagcaatga taaagtgttg cattgaacca ataccgtgct
     7501 gaacagttgg ccaaataaca caagtaattg ctgctaatgg taacatcaca aaaaatgaaa
     7561 tcgtaactac aaatgttaaa ccttggaata caccaaccat ttctggtaat cgtttactat
     7621 agtatctatt gtgaatccaa gtaataatag ctgaaataat aataccacct agaatattcg
     7681 tatccaatgt ggcaatacct gcaattgatt ttaaaccagg tacattttca acgccttttt
     7741 ctaaattagc gccaaacgta tgtggccatt gtgttaaaat ggcatttata aatgtattaa
     7801 acattaagta acccatcaat gctgcaagtg ctgcatgacc tggtgctttt ttagctaaag
     7861 aaagtggtag acctacaaca aatacaactt ccatatgcgt aaaaataacc cagccaccag
     7921 attctattac tgaccaaaat ttaaaccaaa acgtatgttg atctgctaaa ctccccatga
     7981 ttgtaggatt tttaaataat gtcgcaaagc caagcactat cccaaagaaa gcgaacatta
     8041 ataccggtac aatcattgca ctaccgaaac gctttatcgc attcatcttc tattccctcc
     8101 atatcatctt tcctaacaat acatctaatt agattcattt ataaatagat gtcttactat
     8161 ttaaatataa tatatagtaa acgcttacac acctacaacg acattgacgt attttgaaag
     8221 tattttgtat aatcagatta tcttttcata tagtgaaaat tttttcacga ccttatatat
     8281 gacatcgttg tatttgtaat acattcgttt taaacgcata atcaaaccta tatcaataca
     8341 caaatatata taatgacata caagatttta atgtaataac gatctattac acatttattt
     8401 tcaaggaggt tgaatatgtt tttagatgaa cacattaatc gaaactttga taaacttaat
     8461 gataatgatt tacatatcgc tcactttatc aatacacata tagatgaatg taaaaatatg
     8521 aaaatacaag atttagcgca attcacacat gcctcgaatg caaccattca cagatttaca
     8581 cgcaaattag gttttgacgg ttatagtgat tttaaatcgt accttaaatt tgaaagtaat
     8641 aagacacacc aattaccttc taactctatc gatagtttca aacaagaaat cgatagtaca
     8701 ttcagttatt tagaacgcgt tgattaccag cttcttacta aaaaaatgca tacagcttca
     8761 acaatatatt tgtatggtac agggcgtgca cagttaaacg ttgcttcaga ggcacagcgt
     8821 atattgttaa cgttacataa tcatgtcatt gtacttcatg atgaacatga acttaaaatg
     8881 attttgaaca agagtgaacc taatgattta ttctttatta tttcattatc aggtgaaaca
     8941 catgaattat tagaagtaac aaacttgctt caacttagac aaaaatactt tatttctgtt
     9001 actacaatga aagataatac ccttgctcaa aaagcaaatt acaacgtcta tgtatccagt
     9061 aacacattct acttaactga tggtacagac tattctagct tcatcagtta tcatatattc
     9121 tttgaaacac ttgtaagaaa atataatgag tatttactac ataatgatat ttcaaattag
     9181 aaaaaaggaa gttatgattt aatggccttg agcctatcat aacttccttt tatcatttta
     9241 ttgttgtgtt gatgtttcga taacgtggta catcttatca aacatcaatt cgaaaccatg
     9301 caccatggca tcatgatatt cttttttctt ttgcttgtat tctaaattag taaatcgtct
     9361 ttctttttca actaatgaac gataataaaa tagcatttgg gtgccacctg tttcacgttc
     9421 aaaaaattct acctcaatga catcttgcgt ttcacttagt ccaggcatac cgatagtcat
     9481 cttaacgtat tcatccataa ctaaagattc ataaatgcct tcaatcacat ttactttgcc
     9541 attacgttgt tgatctacaa tacgatattt accgccttct ttaacgtccg cttcaatctc
     9601 tttattcgtt ctggctgatg tcataaacca ttgtttcaac aaatctttct ttgtccaagc
     9661 ttcgtatact aactctggag aaaatttata aagcttttca atttcaactt cgacatgttc
     9721 attctctaca ttaaattttg ccactgttgt ccacccactt tcgctcttac ttttatttta
     9781 acgtattttt gctcagttcc aaacatagat gatcatcatt tttaaaagat tagcgttata
     9841 cggtgagtac aacatgatct gttaatataa caagccacct tacttggcta catcgatata
     9901 ttgttaagca ttaatgtttc atttcttgac tagtgttctt ttttagcttt ggaaaattaa
     9961 ataaaatcgc aataagtccg catacaccta ataatatagg ataaatgctg tatgggaata
    10021 acattaacgg tgaaatacca gctacaccag ccgctgaaat gacttgcggg ctatatggta
    10081 ataaaccttg gaagcagcct ccaaatatat caagaatact tgctgatttc cttgaatcta
    10141 catcatattc atctgcaata tttttagcta aaggacctga cataataata gagatggtgt
    10201 tgtttgccgt ggcaatatct gcgacactta ccaaactagc aattcctaat tctgcgccac
    10261 gctttgattt cactttagag cgaacaaatt gcaacaacca ttcaatacca ccattgtgtt
    10321 gaataatacc gactaaacca ccaattagca acgcaatcat agcaatatct tccatgctta
    10381 taataccttt ggacactgca tctagtagcc ccatccaacc gaatgaacca tctatgagac
    10441 caatgattcc ggctaataat gttccgccaa tcaatacgat aatgacattt acacctaata
    10501 atgctaatac caatactaag atatacggta caactttaat tagattataa tcatagtttt
    10561 tagcatgatt taaagaaatg ccattcgtta agaaatacag aataataatc gttaaaatag
    10621 cacctggcaa tacaatttta aagtttactc tgaatttatc tttcattttc gtatgttgtg
    10681 ttctaaccgc agcaattgtt gtatctgaaa tcattgatag attatcgccg aacattgcac
    10741 ctccaacaac tgtagccatt gctagcgcag ttggtacatc tgtcgcttgt gcaaatccgt
    10801 aaccaacagg tgctattgca gcaacagttc ctacagacgt ccccatagat atagaaacaa
    10861 acatacaaat cacaaacaat cctacaataa ttaaattttc tgggattaat gatagtccta
    10921 aattaactgt cgactttacg ccacccattt tttcagctgt atttgaaaat gcacctgcta
    10981 aaataaaaat caacatcatt aaaacaatgt ttgaatggcc tgcacctttc gtgaagacct
    11041 caactttttt agcaaatgat tcttttcgat tcattaataa cgccacaatt accgttatcg
    11101 taattgcaac atttaatggc attgaagtaa aatcacctgt gataatacct acgcctaaaa
    11161 acaacgccac aaataataac aaggggaata atgcccaagc attgctcttt ttatgtactt
    11221 ccatcctttt tacctgcttt ccaattaaaa atacctcttt ctcacaaacg atgaagaaag
    11281 aggttttcat gtgctttacc tgcttatctt caaaccatta cggttactgg aattggcaca
    11341 ttcgagatgt tgccgaggct tcatagggcc agtccctcca cctctctaga taagtgatgc
    11401 ttatttacgt ttacgttaca agataatcct tagtacgtca atcataaatt aatcaggagt
    11461 cgtataatat ttttcataaa caatcattgc tactgtaata ataatcaaaa caataatgct
    11521 aataacaagt aaaagccacc atttaagcat taatgcaata aaaatgaaca cgatagacac
    11581 acttactaat attaatgata tgactttaaa ttgctgaaca cgttgcttgg agatgacttt
    11641 caactgtttg tttgatagac gcgtattttt tatactgatt cccagtatat tttctaatat
    11701 ttgaaccaat acgatactta ttgcaaatat aataattggt aaaacatcat agctccctat
    11761 agttaatgta taaattacaa atccaatgta aagtaaccct gagacaaagg ataaaaagta
    11821 tgcgacgtat ttgttaaact taatgatatg ctttttaacg ttttgatgtg taaaccatac
    11881 attcgaaacg atcgcaactg ctacaaataa tgtgaatact atatataatg gtaatttttg
    11941 ttcaggaaaa acagttgcta ttccaaaagc taatgctaaa atcaaaaata atatagctct
    12001 agatactatt aatgccataa taacaacccc tttgtttaat atcgagtttg caaatttacg
    12061 tttatcagcg tttctatgat cagtacttct acgggtagcg tttctatgta atttacatca
    12121 tcttaacata taaatacttc gctatttaat tgaaaacata tcctattatt ctttgtccgt
    12181 tctgacgttt aatatctagc cttaggcatt tcacttgtta atgaatttaa ctttcttcca
    12241 ctaaccgtcc ctaaacccaa tcccgcaaca gtttttaact ttttcgttgt tgtcctgaca
    12301 tcctcattaa gaaagtttat tctgcttaaa acttataatc cacaccctga gcaaacgctc
    12361 cttatgacag agtattaaaa taagccgata aagatacaca cctttaccga ctatttaaaa
    12421 tacacttcac caattcattt taatttaatg gattgaagta actaaattaa tattatgttg
    12481 ttcaattaaa agcttcatac aaacctaatc tatttgcact ccaccgctaa caccgaacac
    12541 ttgtccggtt gtataacttg attcttctga cgctaatagc acataagttc cacataactc
    12601 aacaggttga cctgcacgac ctaaaggtgt tttttgacca aatgttggga ttttactttg
    12661 aggttgtcca ccagaaattt gtaatggtga ccagaatgga ccaggcgcta cacagttcac
    12721 tctaattcct tttggtccta attcttctga aaaactttta gttaatgaaa taattgctgc
    12781 ttttgaagcg gcataatcat gaagaatagg actaggatta taaccttgta cagatgatgt
    12841 cgttgtaatt gacgcacccg gttttaaata ttccaatgct ttttgaactg tccaaaatag
    12901 cggatagaca ttcgtttcaa atgtttctgt aaatgcctca gttgtaaatc catgaatatc
    12961 atcatgatac tgttgatgtc cagcaactaa agtaacatta tctaagccac ctaattgttg
    13021 atatgcttgt tcaacaaggt catagttgaa ctgttcatct cttatatcac caggaattaa
    13081 cactgccttt tgaccacttt cttcaatcac ttggcgtact tcttgtgcat cttgttcttc
    13141 actcggaaga tagttaatcg ctacatctgc accttcttta gcatacgcaa ttgctgctgc
    13201 acgccctatt gctgagtcac cacctgtgac taatatttta tagccttgta agcgttgatg
    13261 accttggtaa gacgtttcgc cacaatcggg tgctggcgtc atttcagatt gtaaacccgg
    13321 tacctcttgt tcttgttttt cataatccgt tgttttaaat tttgttctag gatcttgagc
    13381 tgccattttt ttacatctcc ttattcgctt aatggttatt atttacccaa tcttcctagg
    13441 aacttaatca tgattacact aaaaattact ttcttcttta taaaaacaag ctcgaattat
    13501 tcatgcaata gtctctttac aaattcaaca aaatactcag gtactttttc cagaatcctt
    13561 tcatccggtt tatattgagg atgatgtaaa tcatattcac tatgagaacc aattaacgca
    13621 aatacacttg gaaaatgttg actataacct gaaaaatctt ctccaatcgt aagcggctgt
    13681 tccatcattt ccaccttata tccaacatgt tgggctactg caattgcttt atgcgtcaat
    13741 gcctcatcat tcatcacagc gccaggtaaa tgcgtataat ttaaattaat tttcatatta
    13801 tatgcttgag ccaatccgtc cgcaatatct tgtaatcgtg tttctacaag ctttcgtacc
    13861 acaggatcaa aactacgcac tgtgccttgt acatacgcat gatcagcaat gacattccaa
    13921 gtattaccac atgatatttg tccaattgtt actaccgctt catcaaacgc agatagattt
    13981 ctactaacta tggattgaat actattaatc aattgcgcca acacaataac tggatcgttg
    14041 cattgttctg gctttgcagc atgaccaccc acgcctttaa tatgaaactc aaaacgatct
    14101 actgctgatg taattgcccc tgttttgatt gcaaatgtac ctaccgaacg cgatgggtca
    14161 ttatgaaaac ccaatactgc ttgtacatct tttaatgcat gtgtttcaat aattttaaaa
    14221 gcgccatgtc ctagttcttc tgctgattga aaaatgaatt taacacgccc agtaagagtg
    14281 ccctcaattt cttttaattt tacagctgta gccaaaatac tagccatgtg aatatcatga
    14341 ccacacgcat gcataacacc ttcattttca gatttaaaat cctgttcaac aagctcttga
    14401 atcggtaaag catcaatgtc agcccgaaca gctatacaac tcagaccttg tcccacttca
    14461 gcaacaagcc cagtcgcaag tggtaagtct aatattctaa tatgatgttc tgttaaaata
    14521 tctttaattt tttgtgtagt cttaaattct ttatcggata gttctggaaa ttgatgaaaa
    14581 taccttctcc aggtaacagc ttgatctttt aatcccatcg gtcattcccc ttccttaagt
    14641 caatgatatg ttgtctaccc tacgatgatc atctttgact attaaacgat gatttcacaa
    14701 caatgtactc ttgttaattg ctttcgttaa tgatagacag ttgtttaata atatcgtaac
    14761 actgttgtca aactattcta acttttataa ttgagactct atacaaaaac gtgttctcga
    14821 atatacttgt ttttacaaac cacaaaaagc tctaaacatt agtttaaacc aatgcttaga
    14881 gctttctaat tattttatgc tttaaaagat actgtgttat ctacgatgac cttaccgtct
    14941 ttaataactt tttctgcgtg attgatacca aaatgatatg gaatatattc atgatttggt
    15001 gcatcccaaa ttactaaatt agccttatca cctgtgttaa ttgtacccgc gttaatgtct
    15061 attgctttag cagcattgac cgtaacagca ttccaaactt cattaggtga tagctttaat
    15121 ttcaaggctg caatcgccat aacaagttgt aagttgtttg tgacactact accagggtta
    15181 taatcagttg ctaatgcaat cgcaccgtta ttgtcaagca tgcctcttgc atctgcataa
    15241 tcttctttac ctaaatagaa cgtcgttgca ggtaagagga cagctacagt atcactattt
    15301 cgcaactttt cttttccttt atcactagaa gctactaagt ggtctgctga tattgcttgt
    15361 tcatcaattg ctaattccag tccgcctaac ggatcaattt catccgcatg tattttcact
    15421 ttaaaacctg cttctttggc tttttgcata taatgttgcg attgttctat tgtaaataca
    15481 cctgtttcac agaaaatatc cgcaaagtct gcatattgtt ttacttccgg aagtaacgca
    15541 atcatttctt ctaaaaatgc ctcatttgaa cttgcctctt taggtacagc atgaggccct
    15601 aggaaagtat gtttcatgtc taaatcatat ttctcagcta aacgattaga cactttcaat
    15661 tgcttcagtt cattttctct atctaatcca taaccactct tactttcaac tgcaagcacg
    15721 ccgtgtttaa tcatagtaag caaatcatgc tctgcttttt taaacaagtc atcttcggat
    15781 gtttctctag tagcattaac ggtagataat atgccaccac ccatttctaa tatttcaagg
    15841 taagacttac cttgacgttt taatgacatc tcatgttctc gagatccacc aaatgttaaa
    15901 tgggtatgtg catctactaa tgctggggac actaccttcc cactagcatc aatcgtctca
    15961 gtcgcatcgt agtcatctgt atgtgttcca gcatatacaa ttttgccatc tttaatgaca
    16021 actgtaccat ttttcacaac atttaattca tctaattcct tacccttcaa aggtttatct
    16081 gttgatctcg gtaaaattaa ttctgctata tgattaatta ttaaatcatt cattacttat
    16141 cacctgcttt atcaatcatt ggaatatgaa tacctttttc tttagctgtt tgaatagcga
    16201 tgtcatagcc agcatcaaca tgtcgggcaa cacccatacc tgggtcagtc gtcaatacac
    16261 gttccaatct tctttcagca cgctctgatc catctgctac aacaaccata cccgcatgaa
    16321 gtgaatatcc catgccaaca ccgccaccgt gatggaatga aatccatgaa ccacctgcag
    16381 ctgtgttaat gagtgcattc aatacagccc aatcaccaac cgcgtcacta ccatctttca
    16441 tactttctgt ttcacggtta ggactagcaa ctgaaccagc atctaaatgg tctcgtccaa
    16501 taacaattgg tgctgaaatt tcaccgtcac gtacaagacg atttaaagct aagcccattt
    16561 tcgctctttc tccatagcct aaccaagcaa tacgtgatgg tagtccttga tatgaaattt
    16621 tttcttcagc taaatcaagc catcttaata acttttcatt ttctgggaaa agtttgcgca
    16681 tttcttcatc cgcacgctcg atatcttttg gatcaccact caacgcagca aagcggaatg
    16741 gccctttacc ttcacagaat aatggtctaa tgtaagctgg tacaaagcct gggaagtcaa
    16801 aagcattttt cactccgtta ttgaaggcta cttgacgaat attgttacca taatcaaatg
    16861 ctacagcgcc acgtttttgg aattcaagca ttaattcaac atgctttgcc attgaagctt
    16921 gtgacagttc aacatatttt ttcggatctt tttcacgcaa tactttcgct tcttctacag
    16981 agtatccttg tggcacatat ccatttagcg gatcatgtgc acttgtttgg tcagtaataa
    17041 tgtcaatttt aaatcctttt tctagaatcg cttgatggat gtctacagca tttccaacta
    17101 acccgattga taatccttct ccacgttctt tcgcctcttc tgctaatttt aatgcttcat
    17161 ctaaatcagc tgttttaaca tcacagtatt tcgtatcaat tcgcttatca acacgtgttt
    17221 catcaacatc cacgcaaatt gctaccccat gattcatagt aattgctaac ggttgcgcac
    17281 cacccatacc acctaaacct gctgtcagtg taacagtgcc tgctaaatct ccattaaagt
    17341 gttgattacc tagctcggca aatgtctcat aagtaccttg cacaatacct tgagaaccaa
    17401 tatatatcca actaccggct gtcatctgtc catacatgat taaacctttt ttatctaatt
    17461 cattaaaatg atcccagttt gcccattcag gcactaatac tgaatttgaa attaatacac
    17521 gtggcgcttc ttcatgtgtt ttaaatacag caactggctt tcctgattgt actaacattg
    17581 tctcatctga ttctaattct cgtaacgttt tctctattgc ttcaaaagct tcccaattac
    17641 gtgctgcttt tccaatacca ccataaacaa ctaaatcttc tggtctttca gcaacttctg
    17701 ggtctaaatt gttgtataac attctaagta ctgcttcttg ttcccaacct ttacactcaa
    17761 tactcaaacc tttttttgct tgaatttttc tcataaaatt cgctcctgtt cttttaagaa
    17821 gttaattcca ctaaatttaa aacgcttaca ttattatctt caatattcat tatagtatgt
    17881 taaaatatag ccaacaaata taaataaact aattatccat agcttgaatc tataaataaa
    17941 aggagcaaaa cacatgaaaa ttattcagtt agaatacttc ttggctatcg tgaaatataa
    18001 tagttttact aaagctgcac aatttttaca tattagccag ccatctttaa ctgctacgat
    18061 taaaaaaatg gaagcagatt taggttatga cttatttaca cgttcaacaa aagacatcaa
    18121 gattaccgaa aaaggaatac agttttatcg ttatgcgagc gaattagttc aacaatatcg
    18181 atccacgatg gaaaaaatgt atgatttaag cgttacatca gaaccaagga taaaaattgg
    18241 gactcttgaa tctacgaatc aatggattgc gaatttaatt cgaaagcacc attccgacta
    18301 ccctgaacag caatatcgtt tatatgaaat acatgataaa catcaatcta tagagcaatt
    18361 actgaatttt aatattcatt tagctataac aaatgaaaaa ataacccacg aagatataag
    18421 atccattcct ttatatgagg aatcttacat tttattagca cccaaggaaa catttaaaaa
    18481 tcaaaattgg gtagatgttg aaaatttgcc actcatatta ccaaacaaaa attctcaagt
    18541 gcgcaaacac ttagatgact attttaatag aagaaatatt cgtccaaatg tcgttgtaga
    18601 aacagatcga ttcgaatcag cagttggatt tgttcatctc ggcttaggtt acgctatcat
    18661 tccgagattt tattaccaat catttcacac gtctaattta gaatataaaa aaattcgtcc
    18721 aaacttaggc cgaaaaattt atatcaatta ccataaaaaa cgcaaacact ccgaacaagt
    18781 acatacattc gtacaacaat gccaagatta tttatatgga cttttagagg ctctttaact
    18841 taagttatta gagcctctta tgcagttgct cagtcaactg tatacctttt tcctttaact
    18901 taagttatta gtgcctctta tgtagttgcg tagtcaactg tatacctttt gcctttaact
    18961 taagttatta gagcctctta tgcagttgcg cagatcatcg tataaaaatt aatgacgtca
    19021 tttcaaaaat cgatacaaaa ataatttatt ataaaaattc taagaaagaa gtgaagcaga
    19081 tgttaaaatc tattaatcat atatgctttt cagtcagaaa tttaaacgat tcaatacatt
    19141 tttatagaga tattttactt gggaaattgc tattgactgg taaaaaaact gcttattttg
    19201 agcttgcagg cctatggatt gctttaaatg aagaaaaaga tataccacgt aatgaaattc
    19261 acttttcata tacacatata gctttcacta tagatgacag cgaatttaaa tattggcatc
    19321 agaggttaaa agataataac gtgaatattt tagaaggaag agttagagat attagagata
    19381 gacaatcaat ttactttacc gaccctgatg gtcataagct agaattacat actggcacac
    19441 ttgagaacag attaaattat tataaagagg ctaaaccaca tatgacattt tacaaataag
    19501 gtgtcattat aaaaaggcct cttgaactcc gttaaaattt taattaatta ttatataata
    19561 agagaacttt tcaaacaata cagttgttat ttttgctatt tcaacaaaca taaataagca
    19621 gtaagatgac tacaacttaa gagtcttctt actgcaatta tttttcaaat atatcaacgt
    19681 taatataact tctattaaga aatactcaca ttctgccctg caatgcaaat ctcgtcacat
    19741 ataaatattt ttaattattt taaaaaatga tgcactaaat tagcaacgag cttagcagtt
    19801 ctattgtcag cgtcatatgt tggattcatc tcagcaatac taactgaaga caccttatca
    19861 cttggaataa tacgttttgc taattcaaga acagtatgtg gatacaaacc taacactgcc
    19921 ggcgcactta ccccaggcgc aaacgcacta tcaatgacat ccatacaaat cgtaaacata
    19981 atgacatcat gttcatgtac aaaacgttca atcatatctt taattgttgg tgatacgtga
    20041 ctcaataatt catctgcaaa gacataatca atctttttct ctttagcata atcaaataaa
    20101 ctttgcgtat taccaccttg agcaatacca agcactaaat aatctgtgtt ttcatcttct
    20161 tctaaaattt gtctaaagct cgttccagat gtagattgtt gttcagcacg tgtatcaaaa
    20221 tgcgcatcaa tatttatcac accaatagat tgtgttggat agactttacg tgttgctaaa
    20281 tattgagcat acgcaatatc atgtccacca cctaataaaa atgtttgtct atgattagca
    20341 attgacttcg ctgcaagcat agcaaattct ttttgagtat caattaattc ctcatgatca
    20401 tgataaacat ttccgtaatc gactaaagtt tcacattgat tcaaatccgg caaacctgca
    20461 aatgcttgtt taatcgcatc tggtccttct tttgcaccaa tgcgcccctt gtttaaagca
    20521 acacctttgt caacagcata gcctaatata ccgacccctg atggcatact actcttttcc
    20581 agcttagaca aatcttcaaa tgttactgtt tgaaaatgtc taaatttttt cgggtctgtt
    20641 tcactatcta accttccagt ccataaattt ggttcacctt gcttgtacac agcatttccc
    20701 cctcttattt atgtggctta ttaacaatta aagtataacg tataggaaat tttgaattca
    20761 attcatagtt aaatccgtat cttaaaaata cttatctaca ttacttttac ccctattttc
    20821 tatgtaataa cgaatactta gctgatttat gttaataaaa tacgtcaaga ctattacatt
    20881 ttcattaata ttgacataga caatttatct ctcggcttgt aatatgtata attgttacta
    20941 aaagatattt tgcttgttac ctaatggagg ttacatataa tgaagaacaa taaaatttct
    21001 ggttttcaat gggcaatgac gattttcgtc ttctttgtca ttacaatggc gttatccatt
    21061 atgctcagag atttccagtc tataattggt gtcaaacact ttatatttga agttacagat
    21121 ctagcaccat taattgctgc aatcatttgt atactcgttt tcaaatataa aaaggtccaa
    21181 cttgcaggtt taaaattctc aatcagcctg aaagtaattg aacgtctatt gctagcttta
    21241 attttacctt taattattct aattattggt atgtacagct ttaatacatt tgcagatagc
    21301 tttattttat tacaatcaac aggcttatca gtacctatta cacacattct gattggacat
    21361 attctgatgg cgttcgtagt agaattcgga ttccgttcat acttacaaaa tattgttgaa
    21421 acgaaaatga acacgttctt tgcaagtatt gttgttggtt tgatgtattc agttttctca
    21481 gcaaatacaa cttatggtac agaatttgct gcttataact tcctttatac attctcattc
    21541 tctatgattc ttggtgaatt aattagagcg actaaaggac gtacaattta tattgcaacg
    21601 acattccatg cttcaatgac attcggactt attttcttgt ttagcgaaga aatcggcgat
    21661 ctattttcaa tcaaagtcat cgccatttca acagcaatcg ttgcagtagg atacattggt
    21721 ttaagcttaa ttatccgagg tattgcatat ttaacaacaa gacgaaacct tgaagaactt
    21781 gagcctaata attatttaga ccatgtcaat gacgatgaag aaactaatca tactgaggct
    21841 gaaaaatctt cttcaaatat taaagatgct gaaaaaacag gtgtatctac tgcatcaacg
    21901 gttggtgttg ctaaaaatga tactgaaaat acagtggctg acgaaccaag cattcatgaa
    21961 ggtactgaaa aaacagaacc tcaacatcac ataggtaatc aaactgaatc taatcatgat
    22021 gaagatcatg acatcacttc ggagtcagta gaatcagcag aatcagttaa acaagcacca
    22081 caaagtgacg atttaacaaa cgattcaaat gaagatgaaa tagagcaatc attaaaagaa
    22141 cctgcgactt ataaagaaga cagacgttca tcagttgtaa ttgatgcaga aaaacatatc
    22201 gaaaaaactg aagaacaatc ttcagataaa aacaaataat aacaaagcgc ttgctagtac
    22261 ctcttaaaaa gatgatgcta gcaagcgctt ttctatacta tatattattt ttctaaaatt
    22321 ttaacaccct cttgagtgcc tacaataact tgatctgcca tatctaagaa gtatcctgtc
    22381 tcaaacacac ctgtcagatg aattaaatac tcatggaact tatatgggtc aattcctttt
    22441 ggtaacttac aatctaaaat ataattgcca ttatcagtta taaatgcgac atcttcgttt
    22501 acacgacgtt ctacttttat atcagcgtat gattcaattt tacgtaatat gtgataccag
    22561 ttaaatttat ccacctctac tggtaactta aacgtctcac ctaagtattg aactattttc
    22621 gtttcatcga caaccacaac aaaacgcgat gccatttcat ctataacttt ctctctgaac
    22681 agcgcaccac cgccaccttt aattatattt aaagatggat ctacttcatc agcaccatca
    22741 attgctaagt cgatatgatc aacatcattg atttcacata ttttaatacc taattctttt
    22801 gctaaaaatg caattttatt agaagtgcat acacctgtaa tattgtaacc acgttcttta
    22861 attagttgcg ccatttgagg taagagtaat tccattgtac ttcctgtacc aattcccagc
    22921 gtcatgtcac cattgatttg acttaaaaca tcatttaatg tcattaactt gagtgctttg
    22981 acatctttca tgaaggtagc ctcccatatt tatgtaatct attcaattca tattttacat
    23041 gactcgtata aattaacata cccttatttc taacattttt ttaaacatat caatcagaat
    23101 ttacaattct aaaaatgttt tatagtacaa tatattttaa ataatactcg ttaaggagaa
    23161 tgatatgata tcaattcacg caatttcgac aggaaaaatc caagatttgc cttatagctc
    23221 gaaaagaccg atgcgctctg ctttagataa aactaagatt tcacaaacaa catggttatc
    23281 ttcaactggt ttcactggtg atgaacaggc ttataaagat catggtggac cacataaagc
    23341 agtttgtggg tttagtaagc ataattatgc actgtatcaa gatgatttac ctacactacc
    23401 tactcatgcg atgtttggag agaatttaac atttgattat ttagacgaat ctgatgttta
    23461 ctttggtaat caatatcgtt taggtgaagc gttaattgag gtttctgaaa ttagagaacc
    23521 atgctggaaa attcaagcaa aatataatat tcctgattta gtgaagcgca tgtctacatc
    23581 tggtaaaaca ggtttctatt tccgggtatt aaaacaaggc tatgtatctc caaatgatca
    23641 gctttactta atacaagaag caccaatcga acatcgttta tctgtacaac agcttaatga
    23701 cctttattat aatgatagac aaaatcaaga tatgttacga tatgcactaa acaatccatt
    23761 tctgtcacca acaagacgcg ataaacttca aaaaatgtat aacagaacat tgaaataatt
    23821 acctttcatt ataagtgtta aatgaacttt tcaaaacaaa aaggaatcaa cttacacatc
    23881 gtttgtataa tagtcttatc tataaccact gatgctattg attccttttt tatgttatat
    23941 attttcttta tttcaaactg tatattaatg atgtcacttc atttgatacg attcttgata
    24001 acctattcaa aattccgcca aataacataa atattatata aatgccgata cttttaatca
    24061 ttttctactt tttcttcgat acggaaactt gttttcgaat tgaacacttc accagctttt
    24121 aaaattgacg gtgctttttc accatataaa ttaatatcat ttggtaaaaa ttgtgtttct
    24181 aatgtaaagc cagaatgtgg tttataaata ttaaatggac tatcccactc atcaggctgg
    24241 ttaaaagtaa agaacacaac atgaggcata tctgtatcga cctctaacat aaattcatga
    24301 ttttcaacat acattttatg ttcaccaact gtaaatgggt gatcgagacc accaaaacgt
    24361 gtcatttgtt ggcttaattg cgcatgttgt gatgtaaaaa tatcactcaa ttttatcttg
    24421 ttatcttcaa acacttcatg taaatctaga atatcacctg taacaatatt tcgctcatct
    24481 aatacataca tatctaattg attacttgaa atgcgatgat tatcaacgac attattatct
    24541 cgattcaaat tgaagtacac atgattcgta ggactaaaca atgtgtcttc tgatgcaact
    24601 gcttcgtatt caatcgacca ttggtgatcc gcatcataaa tatgtgtaat cgtcacatcg
    24661 atatcacccg ggaaatgatc atcagctgat ttcaacaccg tcttaaatat aactttaatt
    24721 tgagcaattt catttctaat ttcataatca aataacttat tgtccaaacc atgacatcca
    24781 ccatgtaaat gatgttcacc gttgtttttt tctaactgat attctttacc tttcaactta
    24841 aatttagcat tatcaattct accgctatat cttcctatag aagcaccaaa tttaaaagga
    24901 ttactatgat aaaatttatc cgcttcaaca acatttccaa gaacaatatt attatcatga
    24961 tatttccaag acactactct tgctccataa ttcgtaaaaa taattttagt ttcatcatta
    25021 tcaattttga ttaaatctac accttgtctt tggtgctcaa cttcaactat catttttact
    25081 tctcccttct aaccacaagt gttcaagctc tgctgggtag caacattact aaaacaccta
    25141 caatacaaat gattgcaccg ataacatcat atttatctgg catttgttta tctacgacca
    25201 tcgcaaaaat caaactcatg atgataaata cgccaccata tgctgcatat actcttccga
    25261 atgatggaaa tgattgaaat gtcgcaatga caccatataa catgagtatc gcaccgccta
    25321 ttagcccaac aagtgaagac tgtccttccc taagccacag ccaaatcagg tatcccccac
    25381 ctatttcaca taagccagct aatataaata taaaaatcgg atataacatg aaatcactcc
    25441 atcacacatt tgctatcaat aatctatcgg ctacatatca tttgtttaca tttcttctta
    25501 cttcacattc ccattttaaa aagttcgttt tcacattcat attgtacact tttttagaca
    25561 ttattctata gctaaatata aaaaaataag agtaacacgc tttcatcatc attttatatg
    25621 ataaatgtgt gtcactctca tcaattttat tttttaaata cacgtttcat tgaattaaat
    25681 aagccacgtt caaatgtaag tactgaatct ttatatgttt taattgcaat ccatatcaag
    25741 acagctacca ttacaattga gattaaagaa cttaagatga cctcatatat ttgaagccct
    25801 gaagtttgag cgcgtacaac taattgaaat ggcgctaaaa acggaatata acttgtgatt
    25861 aaagcaagtt gtccatcagg attatttatc gtgaatatcg cgatataaaa tgcaatcata
    25921 ccaagtaatg tcagtggcat caaagattga tttaaatctt ctattctaga tgttaatgat
    25981 ccgaggatgg ctgcaagtaa tacatacgcc gtaattccaa caatactact tataattccg
    26041 acaataataa tttgccaaga caattgattc atttccacgt taaaaccttg tagcaagtct
    26101 tttaagtcaa aggcaaaaat gcatataact gccatcaata caattaaaat aatctgagtc
    26161 acggcaactg ctataacgcc taaaatttta gcaaaaatat gttggattgg tgaaatactt
    26221 gtaataatca tttcaatgac acgcgatgtt ttctcactag caatttccat agctatttga
    26281 gatgcataat ttaaaacaat gaagaacatt agaaagataa tgccataagc taaagcatag
    26341 ttgaaaatct tttgtccttc tgatacttta tcgacttcat cattagaaat caccttatta
    26401 tcaactttac tttgtgcttg taatttttgt aagtcttctt tgttgatatt taattccccg
    26461 gctaccatat ttgtttgaat agctgtaagc agtgcttgta ctttttgtga atcttcatga
    26521 cttactcgct tctcactaat gattgtccct tgtaacgtgc gattttgatt caccttgata
    26581 atataagctt tatcaagttt atgttttttt acttcttttt cagcatcttc tatagaaact
    26641 ttagtaaact tagcatcact atgaaatgta ttcgcctgtt gcttgaaaac cttatagatt
    26701 tgttcattcg gtgctgctac accaatttta tctggaccat catcaaacat gttaataatc
    26761 ttatcaatgt tagataggcc aatcattaag gcagcaataa taatcataaa aattacaaat
    26821 gatttagctt taattttttt gatatatgtc aaagtaaatg tcgcccaaaa cttatgcatc
    26881 cttgccacca accttctcaa tgaatatatc ttgtaatgat ggttctacaa cttggaatcg
    26941 tttaacataa ccttgatgtg ccacaacttg ataaatatct ttggctacgt cttcattctc
    27001 aatcgtcaac tgaagacctt gcttcatgtt ttcactatga atgatgcctc taatgtttgt
    27061 taaatctggt agtgttgttt ctgattcaat gacaactttc ttgttaccat tagatgcacg
    27121 tacatgattg atatcaccag aaacaacaag ttgaccttta tctaaaatac aaacatcatc
    27181 acataattct tcaacatgct ccatacggtg agaactataa acgattgtac tgccccaatc
    27241 atttaagtct ttaactgctt cttttaataa ctcaacatta actgggtcta gaccactgaa
    27301 aggctcatct aatattagta attctggttt atgtaacata cttgctaaca gctgaatttt
    27361 ttgttgattc ccttttgata gactatcaat tcgttttttg cggttttcag taatatcaaa
    27421 acgctcaagc caatacgata tttgctgttg tatttctgtt tttgacattc cctttaaagt
    27481 tgccaaatat ttcaattctt cttcaactgt caatttccca tgtaaaccgc gttcttccgg
    27541 taaataacca atacgattgt acattgtttt atctagtttt ttaccgttat acgtaatgtg
    27601 tccttcagtt ggttcactta agcctaaaat catacgaaat gtcgttgttt tacctgcacc
    27661 atttcttcct agaaaaccta acattttacc tgattctaac tttaatgaaa tatcatttac
    27721 tgccgtcatc ttgccaaaac gtttcgtaac atgttcaatt acaagtccca tactttgcct
    27781 cctaaaaaaa tatgtattta tcttaatata acatttccat tctctataaa tgcaatattt
    27841 ttaaaatgaa tttattttta aaatttctga aattgaaaaa tttaaatagt gccatttttg
    27901 catgttaagt atcattagca ctagatatgt tttttccatg cctttattgc cttatttgta
    27961 aaaaaatatc ccagcatcat tgtgccgaga tatttatatc attacaattg attatctgtt
    28021 tcttccggtg ttttcggtgt ttcagatgta cacgcttttt ccggtgtttc agatgtcact
    28081 ggttgatttt taattgtaga cgggtatttt gggctttcgc catatttatt tgccggctta
    28141 ctgtcaaagc ataggaatac tatcataaca attgttaggc ctaaataaac aaaataaaga
    28201 agtactaaca aaatattaag acccatcggc attaatgtaa aatcactgtc ataataacta
    28261 tcgataatct gtaatactat ataaaatata atactgaata ctgtcataat cattggaaat
    28321 aacattgttc ttgatatatc gtgaaatctt cgaacgcaca acgctaaatt tggaataaac
    28381 gttgccaaac tatagacaaa agtatacaca gatgtaagga taatcatcaa tatactcata
    28441 actattaatg tttcgttatc cgccgctata gaaataaaga atagaaatag gtttattatt
    28501 agcacacaca cagctggaac cataagtatc aaatgccata gtgccatata ccaatattca
    28561 ctacgtcttg atctcccctt aaaatttaca taatttttcc aaaataaaac gaatgatttc
    28621 ataaaaccta cttgaggtaa ttgttccatt gtaatctccc tttcgttaat catatttata
    28681 tttttaatta ttgttaccgt tataatttac aagattcatt atcaagccac ttcatttcaa
    28741 tcgtcaatca ctttggaaaa tgaactttat atttcatcac tagtaaaatg aaaacccgct
    28801 acaagtacac atctatatgg agactcattt gaaagtcaac gctttgttaa ctatactaaa
    28861 aatatgtcat actgcaatgt tcacgtttaa aagagtctca atctatgcaa ataaaatatt
    28921 ccataacaaa gtatatactt tacattttta taattcttaa caatactatt ttatcaaaca
    28981 tttaccacaa taaaaatatc tttttcattt ttatttaaat taatcatata attgcgagga
    29041 gaatattatg gatttcgtta ataatgatac aagacaaatt gctaaaaact tattaggtgt
    29101 caaagtgatt tatcaggata ccactcaaac gtatacaggc tacatcgtgg aaacggaagc
    29161 ttacttaggt ttgaatgatc gtgcggctca tggctatggc ggtaaaataa cacctaaagt
    29221 cacgtcatta tataaacgtg gtggtacaat ttatgcacat gtcatgcata cgcatttact
    29281 cattaatttt gtaacaaaat ctgaaggtat acctgaaggc gtacttatcc gcgcaattga
    29341 accagaagaa ggtttatccg ctatgttccg taacagaggt aagaaaggct acgaggtaac
    29401 gaatggccca ggaaaatgga ctaaggcatt taacattcca cgggctatcg atggcgctac
    29461 gttaaatgac tgtagattgt ctattgatac taagaatcgt aaatatccta aagatattat
    29521 tgctagtcca cgaatcggta ttccaaataa aggtgattgg acacataaat ctttacgtta
    29581 cacagtgaaa ggtaatccat ttgtgtctcg catgcgtaaa tcagattgta tgtttcccga
    29641 agatacttgg aaataaatgc catctttcat tgattactat catgaaaatg aaatctatct
    29701 ccctataagt caatcaatcg tgccgtcaac atgcggatgg gttgattgtt tttctttgta
    29761 tccatcatat tttttgattc atctcctctt attgaacttg ttcttaatta taaaatataa
    29821 caatagaatt atttataatt attaaattta gatgcattaa tattattgat attattttca
    29881 aaaactagaa atattgattt gttgcatgta taatgttaaa agcgcccttt tataacgctt
    29941 acatataaaa gcttatttag ggagagggat attcaacaag ggggatttga aaatgataga
    30001 acttaatgca attacaacat tatgtttagc ttgtatcctt tatttacttg gtaaggctat
    30061 cgttaatcac gttaattttt taaaacgtat ttgtatacca gcaccagtga ttggcggctt
    30121 aatctttgct attttagttg cggctttgga ttcatttggc atggttaaga ttaaattaga
    30181 tgcttcattc attcaagatt tcttcatgtt agcattcttt acgacaatcg gtcttggtgc
    30241 atcattgaaa ttatttaaat taggtggcaa agtcttgcta ttatacttta tgttttgtgc
    30301 tatcatttca gtcattcaaa acatagttgg tgtatcacta gcaaaagtat taaatattaa
    30361 acctttgtta ggattaacag caggttccat gtctatggaa ggcggtcatg gtaatgctgc
    30421 tgcttatggt aagacaattc aagatttagg tattgattcg gcactgacag cggctcttgc
    30481 agctgcaact ttaggtcttg tatttggagg gcttatcggt ggtccagttg taaaattttt
    30541 aatcaaacgt tataacttaa agcctcaaca tagtgacgat acatttaaag attatagcca
    30601 agtagcatat aacgaacatt tacatagtaa atttaatgcc actgaagtat tcttcattca
    30661 atttacaatc gttgtattct gtatggcagt tggaagttat ttcagtcatt tgtttacagc
    30721 tcaaacaggg attaatgttc caatttacgt tggctcatta tttgtagctg ttattgtccg
    30781 aaatatctct gaaagtttta attttaatat tgtagattta aaaattacta atcaaattgg
    30841 cgatgtcgca ttaggtattt tcttatctct tgcgctaatg agcattcaat taatcgaaat
    30901 ttataaactt gctatacctc ttattattat cgttttagtt caagttgtcg ttatgatttt
    30961 atttgctgtt ttaattttat ttagaggttt aggaaaagat tatgatgctg cagtaatggt
    31021 aggtggtttt atcggtcatg ggcttggtgc aacgccaaat gccatggcaa atttagatgt
    31081 tattactaaa aaatatggaa actcacctaa agcatattta gttgtaccta ttgttggtgc
    31141 attcttaatc gatttaattg gtgttatagt cattatggga ttcatacaat ggtttagtta
    31201 aacaccaaac tcataaataa aagaggaggc cttcgcctcc tcttttattt atcctcgatg
    31261 tatattcaag ttacgttgtt ctatccatga caatatttcc ggactaaata cgatttgttt
    31321 ttgtgttaag tcgtcaatat ttttagcatc taacatcgtc attattgatt tcatgtgttc
    31381 aataaatgat tctacataag ctactgtatg tgcaatgcca ttattttcaa cttgatttaa
    31441 aaacggacgt gacataccag ttgcctttgc accaagtgct aaacttttaa ttgcatcgag
    31501 tggtgtacgt aaaccaccac tcgcgaaaac tgaaatttcg ctttgataag ccgttgtttc
    31561 aagtaatgac tcaactgtag actgtcccca tgatgataag taatccatat ctttatttgc
    31621 acgacgttca ttttcaatat ctacaaagtt agtaccacct ttgccactaa catcgacata
    31681 cttgacgcct atttgttgta agtcatgcat taattctttg ctcataccaa atccaacttc
    31741 ttttataatg actggaacag acactcgtga tacaatcgac gctatattat ctaaccaagt
    31801 cacaaattca cgattccctt caggcataac taattcttga ggagaattaa catggatttg
    31861 taacgcttgt gcctcaagta attcaactgc ttccaaagcc ttttctactg gtacgtccgc
    31921 accaacattg ctaaaaatca tgccttcagg attcattttt cgcgcaatcg taaacgtctc
    31981 agccatgcgt ggatttctca atgccgcatg tgttgatcca actgccatcg ctaagccagt
    32041 ttctcttgca actacagcta gcttttcatt gatgtttttc gtccactcgc taccacccgt
    32101 cattgcatta atataaaccg gatatgccat cgttaagtca ggcgtctgtg atgtcaaatc
    32161 gatatcattt acattaattg atgggataga atgatgcaca aaacgcatct tatcaaaatc
    32221 tgaatgcatt gcgtcagatt gggccattgc tatttcaaca tgttcatttt ttctctgttc
    32281 tctttgaaaa tcactcatga ttaaacctac cttttcgtca tttctaattt aaaaccattt
    32341 tttacgtctg aaaaagatga ttaatacgac agctataaca aacattacag ctaagcaaat
    32401 ataatatcca taatgtaaat gtaatgccgg catatttaca aagttcatac cataaatccc
    32461 agctatgaat gttaacggtg aaaatataac tgatactaat gtcagtactt gcataatact
    32521 attcattcta aatgacgtgt atgactcaaa attttctcgt atttcgtttg tcatttcttg
    32581 agcagtacga atgatattac gttgcttaat caagtggtca tcgatatgtt gaatgtatag
    32641 cgaatgttta ttatctataa tcaaatcacc attttgtttc attgtatcaa ttagctcttg
    32701 cataggaaac agtacacgtt ttactttaat caaatccgaa cgtaacttaa agacactatc
    32761 catgaccatt ttattaaagc gatcatctac atggcggtct tcaaaatgat aaacactatc
    32821 ttcaagtgca tatacaaagt tgaaatattt atcaaccatt atatctaaaa ttaatatgac
    32881 gacatctgca caatctaatt ctgcatctaa tgtattcata tacttataga ctactttatt
    32941 taatgattcc aacgtttgat gatgatatgt tactaataca ttgtcttgta taaaaatatt
    33001 tagtgctatt ggtgaatagt ttgaccccat aatactatgg aatactaagt attgataatc
    33061 tttataagat ttatatttag ctcgtggcat accgttaatt gcatcatcca cttctaaatc
    33121 attaaaatta aaatgtgctt taaaccattc attttcttgt tcattcggtt catcaaaatc
    33181 ataccaaaca atagtcgcat cttttggtat ctctttgata tcatcaacta ctttaaacgg
    33241 ttcatatgta gtttgatacc gtatctttaa agccatcgat actcccccta aataacgaat
    33301 tctctattat tttatcatga attaaataac gtgtatgtct taatttattt tagtatgata
    33361 gtcactaagg agatggttat tatcaaacaa ctttttacac atactcaaac cgtaacatct
    33421 gaattcattg accataacaa tcatatgcat gatgcaaatt ataatatcat ttttagtgac
    33481 gtcgtgaatc gttttaatta cagccacggt ctttctttaa aagaacgcga aaatttagca
    33541 tatacgctat ttacactaga agaacatacg acatacctct cagaattgtc tcttggcgat
    33601 gtatttactg ttactttata tatttatgat tacgattata agcggttgca tttattttta
    33661 acattaacta aagaagatgg tacactagca tcaacaaatg aagtaatgat gatgggaatt
    33721 aatcagcaca cacgtcgttc tgatgctttt cctgaatcat tttcaacaca aatagcacac
    33781 tattataaaa atcaatcaac tatcacttgg cctgaacaat taggacataa aatagcaatt
    33841 ccacacaaag gagcattaaa atgacagatg cattacaaca aaagattcat atcgaattac
    33901 tagatttatt agatgatgtt aagtttgaat taacagaatt aaatgcacaa aaagggttat
    33961 acattaacgg accagcaaat cagctactta agcgtggcgt gcatatggct tatgttcaag
    34021 gacaaaagca agccatcgat aatattatga ctattgtgga acaacagctt gaagatcaac
    34081 atttcctaga acattatgat aaatttcaaa atgaggttgc tcatcgcaat tatgataaaa
    34141 cagctaactt tgcagaactt agtgatattc cacgtcaatt cgataatttt ttagatcaat
    34201 tttatcaaat taaagggcaa tactttatca tcacacatat caatacactt attggtgatt
    34261 ttcactcaga agctcattaa caattagtct atataaccct tgctatattt tcaaaaacaa
    34321 aacccaatta cgttttcatg tcaaatatca tcttgcatga aatcgtaact gggtcattta
    34381 tatgttatta gttattttgt gttacatcct catctatcga tttggcaatt tgtttaatag
    34441 ctttatgtga ttgtctaatt ggataaattg gaaaatcatg taccatctta ggataatcat
    34501 aaaactcaat gtattgatga tgttgcaaca tcatttgttc aaatagcttc atatcaggat
    34561 gtgtcatttc acgtccacca ccaaacatat aaactggtgg caatccttct attgtgccat
    34621 taattggcga tatgcgctta tctgttaatg gtaggccatt cgcccatttt ttcataatct
    34681 cattgacacc aaactgactt agaaccgcat cttgttcgat taaggcgtcc gaaatatctt
    34741 tattagatag tgttgcatct aaaattggtg agattaaata caatttattc ggtaatggct
    34801 gttgattatc taaaagagat tgtacaaagg ataatgccag tgcaccacct gaaccatcac
    34861 ccatgactac gacattttga tgtcctactt cagatactaa ttgatcataa acacgttgta
    34921 tcgcttggaa agtatcgtca atatgaaact ctggtgtctt tggatagata ggcagtacaa
    34981 cctcatataa tgtacttaaa gtgattttat ccaacaatct ccaatggaac ggtgatggtt
    35041 gtagtgcatt gaatccaccg tgaatatata aaattttctt atcaatttga tgtctgaaat
    35101 taaagcgaaa gacttgcata tcatctaatg acaatttttc taaatttgct ttaacattta
    35161 atgttgaagg ctgcttatgt ttttttctat tttcaatttc tcttttataa aaaaatcttt
    35221 caacatcttg atcattttta aacataatcg agcgattgtg aagcaaatat ttattgacaa
    35281 cgctattcat aacacggttt ctaatcaatg tcttaaccta cctttatata ttttatgtat
    35341 ccaatgattg tctatcccct acattctttg ccaaaaaaag tatataatgt agaagatatt
    35401 ttctttttca ctttcaaatt taagactaca attgaacagt gatttttcat cattataaca
    35461 gacaactaga catattgata agtaaagaaa agaactttat acggaggtac cttgcatgac
    35521 aaatccaaat caacgattag aaccatttga tgagacattt caacaaccga atattcatcg
    35581 tggtaagcga tatggtaaga aaaaacgttc attggtaagc atgattattc aaatcattgt
    35641 tgttatatta accgcaatcg ctggatacag catgtggaaa caacccattt ttaatattgt
    35701 cttcaccaaa gaatctgtag attttgatgg cattaaaaat tttaacgaga caattggaaa
    35761 aatgcatcaa ttaaatatta atttgggtaa tatcaatgat ttacaacaag gaatcgatcg
    35821 cttaatttta gtctttaacg gtttctttat tttatgtatc gttagcctag tcataacaat
    35881 actgacaatt gtatttaatc gcacagttct aaaagtagta aatattttag tgttaacaat
    35941 tatgttagtc attacattgt atttcagtta tattattaaa gcactcgcac aagaaattgc
    36001 agatgttttc aaaaaatatt atttaaatgt accaccagat caagtgatta cagaagctga
    36061 cgctattcat aacggcatca ttttacttgg ctgtagcatc ggtttacttg ttataagctt
    36121 attcttccgt aatcgcatgc ctcgtttaaa ataatgttat atagtaggga ttgggacaga
    36181 aatgttattt tcacaaaatt catttcgttg acccacttcc tgctttttct ttattaatga
    36241 cctactacgt caatgccaaa ttttaatata attcctctaa cattctataa atcaacaaat
    36301 aaaaaaagta tcgataacca tatttggcac cgatacttta aaaatcatgt ccccacaaca
    36361 taatttttga ttagtcacac ttcaattaat ttattttatt tattcatgat tgatactatt
    36421 atctgcatct aacttttgag ctgtagcttt tgctttttta ttactttgta aaaataaaca
    36481 taaaattaag gcgatgatgc taaatatcgt tgcaactata aatgcatcat taataccttc
    36541 aaccgttgct agtttattta caaattgtag taacactttc attgcgcctt cttgtccgcc
    36601 atattgtgat gctaattcac gcatatgatc ttgtacaaca ggattcgttt tatctaactc
    36661 ttccccaaaa gctgataagt gttgtgtagt ttgtgttgtc attacagtaa ctaagattgc
    36721 tgtacctata gagcctgcta attgacgcat cgtatttaag aaagcattac catgagaggc
    36781 aagtcgtccc ggtaacgcat taatagctgc agttaccatt ggcatcatta taaatgccat
    36841 accaaatgaa cgaagtacat agatacccat gattgtcata tatggtgtat ccatatttaa
    36901 tttagttaat tcccatgttg cataagtcat tacagcaata ccaaagatag ctaatggttt
    36961 taaaccaata gtatctaaca atttacctgc aaatggtcct agtagaccca taattagaga
    37021 accaggtaat aataacaatc cggaatctaa tgctgagaat ccgcgtaaat tttgtaaata
    37081 aatcggtaat aaaatcatac caccatataa acttaacatt acaaccatat taataattgt
    37141 tgttaatgta aatgttggga atttcaatac ttctaaattc aacattggtg atttcattct
    37201 taattctcta ataacgaata gaataataaa gataatacca atcgcaaaca ttgtttctat
    37261 ctctactgaa ccccaacctt tgttgccagc ttctgagaaa ccatataaca aagcaccaaa
    37321 accaatcgta ctaaaaatga tacctgggat atcagcttta gggtttgttg tatattgata
    37381 taacttaaac catacaaaac caattaaaat agcgataatc ccgataatga acataccgta
    37441 aaacatcaca ttccaatggt aattttgtac aatataacct gataatgttg gaccaattgc
    37501 aggtgctaaa atcattgcga tacccattgt acccatggca gcaccacgtt tttcaggtgg
    37561 ataaattgta ataataacaa ttgaacctaa tggcattagt acacctgcac caatggcttg
    37621 taatacacgt ccaaccatca tgattgggaa attcattgaa atcgcacaga ttaatgaacc
    37681 aattgtaaag agtactaacg caactaaaaa taattttcga tatgaatatt tattaaatag
    37741 atacgccgta attggtatta aaataccgtt tactaacatg aatcccgtca tcaaccattg
    37801 ccctgttgac gcagaaatat taaattccgt attaattttt ggtaaagcaa catttaataa
    37861 tgtttggttt aaaatcgcaa taaacatacc gaataataat gccgctaata ttttaccgcg
    37921 tgaaacacct tcaccaaaaa taaagttttt atgttctttt tttatttttt cattcacttt
    37981 atattcttct gattcaggat ttttagcagc aactgcttcc tcatccttat tattagtgaa
    38041 tgcttcttga tctttctcag acccctttgt gtaaccattt agactaactt ggctatgatc
    38101 atcttgattg tcaacacgca actcttcatg cgtcatacgt tgtgtcgatt gatcagttgt
    38161 tttgtctaaa tcactagctt taaatttaga ttgatttgat tgacgtgtcg taaattgttg
    38221 ttccttttgt tggcgtttgc ctttttttct tgatcttatt aaaaataaat tgataacccc
    38281 aacaataatg agcgctaaaa taatgtagct aataatgaag gtcgtagtca tttaatgacc
    38341 cccttaattt ttatggattt ttacttcagc gttcattcca ggaacaactt gtttagacgg
    38401 ttctgattct agagtgattt taacaggtat tacttgagaa actttagtgt agttaccatc
    38461 actatttgat gatggcatta atgaaaagct tgcagcagtt gcttttccaa tactatcaac
    38521 tttaccttta atagaagctt tttgaccgtc aatagtcaca tcaacatctt tacctacttc
    38581 aacatcttta atatcttttt cgtcaatatt tgctgttaca tataaatcat ctaaattgta
    38641 tgcataagcg attgggttac cagcttgcac cattgaacct tccataccat ctaatttggc
    38701 aattgtacct ttttgaggca ttttaagatc catatctttc gtttcgccat cttgaccttg
    38761 tacagtaaca attgctactt tgtcaccttt atcgagtttg tcaccttgtt taacattaag
    38821 tgatttaatt tgtccagatg caggacttgc tattttaatt tgatcgccat ttacttttgc
    38881 attatcagtt gttacatagc ttgttgtttt attccaaaaa taaaagccag caatcccaat
    38941 tgctaacagt acaacaaccg taatgacatt aattaatatc atctttttca tgaaacattt
    39001 cctcctattt gcttttaaaa ttcactttat ttattataga gacatgataa ctaaaaaaac
    39061 accaacaatt tttataagag tgttggttaa aattcacaaa ggtgtaacaa tatgaaacga
    39121 caagccaaaa tagaaattca aaacgcactt gttgatttga tggctgaata tccttttcaa
    39181 gaaatatcca ctaaaatgat ttgcgcgtat tgtaatatta atcgttctac tttttatgat
    39241 tattacaaag ataaatttga tttattggat accatcaact caaagcataa ggaaaaattc
    39301 caatttcttc taagcgcgct acatcataat ttcgaaaata ttaaacagga taagcttaaa
    39361 ctttataaat tcttcattat tattgctaag tatatcaagc acaatgagca gtttttcaaa
    39421 gacattttag ttacctatcc aatgaaaaca ttattcatag actatataaa tttagcgaga
    39481 gattactatc aacaaattat gaatgactat agtactacag taaccaataa acagctttat
    39541 gttacatata tcataggcgg tcaagctggg gtgtttatta attggctttc gaatggttgt
    39601 aatgaatcac ctgaagaagt tgctgacatt ttattggcta atacgattaa acttcaaaac
    39661 taataatacg gtttcattct aataaagaaa tgctataaaa caactagata aagttaaacc
    39721 aaatggatag ataatagtac atatgtaacg gtgctatcaa tataaaaatg ccgagatttc
    39781 cacataataa tctcggcatt tttatttttg atgctaaatt cataggtcta tgaatagctc
    39841 aagttttgtt ttttaatttt tcaattcaat ataatagaag aaactatgtt tatcatcgat
    39901 ttgttttaaa taccttcata ttataaatct gtaaaataat taatataact gctgtagcta
    39961 taataataat tatgtaaggt ataggattat cttcaccttt tacccccact aatggcgatg
    40021 caacaccacc aaataaaaac tgtactaaac ctaataaact tgatgaactc cctctaccac
    40081 tactactttc atccatagct attgtaaaac caagtgtcgc aacacctgtc actggtgcta
    40141 ttaaaatgat aaatcctatc gctaaaatcc aaaagttcca atgattaagc aatacaatcg
    40201 tcactaaaat cacaccgata atctgaatca tcgtcatgcc tctcatcaat ttttgtgagt
    40261 ctataaaatc aacaaggtac ccagtaagtt gacttgatat aatgagcgta ataccaattc
    40321 ctgcaaacat ccaactaaat tgtattgcag tcatgccata aattttttga ataataaacg
    40381 gagacgcaga aatataagta aataatatta caaatgtcat accttgaatg agcattggta
    40441 atacaaaacg tggcgtcttc aataatattt tgaagttttt aaacattgtc tttaatccac
    40501 tacttgactc acgatttgtc actgttaatg attcaggtac ttttaataaa gaacctatga
    40561 ccatgacgaa gccaaagata gtcagaatga caaagaccat acgccagaca gaataattta
    40621 aaattatgcc ccctattgtt ggcgcaacaa ctggtgcaat accattaaca agcatcaata
    40681 atgccataaa cttagttagt tcattaccac tatacatatc acttgctata gctcttgaaa
    40741 taactgctgc tgcgccacct gtcactcctt gaagaaatct taatgcaacc atcagccaaa
    40801 tattatgtac aaaaacaata cctaaacttg ctaatgtaaa aataatcata gctataataa
    40861 gcggctttct gcgcccagtt gaatctgaaa ttggaccagc aaacaaatta ccaaacgcta
    40921 aaccaatcat aaacatcgat aatgttaatt gtgcgttaga cgtcgttgtt tgaaaatcat
    40981 gtctaatatc tggtaatcca ggcaaaaaca tatctatcga taatgctcca atggccgtca
    41041 aagatcctaa aataataata aatatcggtg aacgcttgtt aaaatgcgtt aaatcattca
    41101 tatgactatc tcctttatat aatgattagt ttataactat cacgaacaga aactaaattt
    41161 aaatatgctc ttttatatat tagcattagt cacaagtttc atgaacatca ttacaactta
    41221 taaaaggtat aaaatgatat aaacctcagc acttcataaa tttttccaca aaaaacaatc
    41281 ccttcaaagt aattcacact aattgtaaat actttgaaag gatgttgttt gtattccatg
    41341 acacatgcat cttatttaag ttttatactc tatttttctg atgtcttgat taattgcaag
    41401 cggtcttgcg agccttgttc aagctcatat tctttatcta cttgcttacc gttttcattt
    41461 attaatctta cggttgcggt aatcttatca ccatgttttt cagcatctat aatttgtggt
    41521 gaactaatca tcattaaact tcctttagat acacgcttct ttacatcatc ataaaaagat
    41581 gatccttttt ttatatatga tgatacaaaa tcaaaatccg actgattaaa cgcagcatta
    41641 ttcgctaaag aatatccagc aaagaattct atcaatttgt tcttcaagct gttttcttct
    41701 ttttctttct tttcaacata gtcttcgata tcttcactgt caaaattcaa agttatctct
    41761 gtattgtatt ttaaatcgct agctttaatc gtcttcgtct gtgttgtaaa tgttttatct
    41821 ttcgctttac ctgaagctga aatggtaata tctttatttt gtggatatgg accatacgtt
    41881 ttggaacttg aaaatgccat ttcatggtca tttatagtta cttttttaga actatcattt
    41941 aattttgtat cgccttttaa agttacagat atatttgctt cttcaaaatc ttcagtaaca
    42001 tctaccgttt cagaattact ttgtctaaaa tcaaatttta aatggcctgc aaaatcaccg
    42061 ttctcagttg atttcatagc tggaattcta tatgtccccg gtataaaatt acctattggc
    42121 gtcactttat ttgcttcagc tataaccatc tttttcttac caccagattt aaactcatat
    42181 tttgtttttt ctttcggttt aacaattggt tgcttggtag gtgcagtaaa gctcatatta
    42241 tcgaaaaaga tataacgtgt gccattttta cttacacgta atatattttg accagatctg
    42301 gtttgaatat aagaagctac gctggtctta ctcttattca atttatgtac cgtattttta
    42361 aggtcgctga caaattgctt aagcccaact tcatctttga tatagttaat gtatactttt
    42421 gcttcttcag aatctacttt attatcttta gtacttaata atgttgctac tttttgttta
    42481 tcattattct caatcgcatt cactaatatt ttagtttgcg cttcaggtga attgaagttt
    42541 cttagtaaaa agaacaatat aataattaag attaaaatga aaaaaccaat tgcccaaggc
    42601 accatttttc tcatcttgat gttattagtt tgtatatctt catcggttga ctttctatat
    42661 aatgcttgac gactatcaaa tttatgtcca cattgtgtac atatctgtac atcatcttgt
    42721 gcttgttgtc cgcacttcgg gcaagatttc atactttcac ctcaattctg ttcctcttca
    42781 attgttatat gtatatcaca aaaattattt cattatttta ccattattat tttacaaata
    42841 ttatcccaag aatacaattc aagaaatgat taactttact ttagaattgt accttattac
    42901 attatttatg aaagtactct ctcaattata actaaaaaga aggtgttcaa tacatacata
    42961 tttagtctta tatttgaaca ccttcaaaaa cctatttatg attgctatat gttttaatgc
    43021 gatgattgat gacttctaat acttgcctta cattttcaat atcttcagaa tttaaatcat
    43081 tagtaatatc ttgcgcaata tctgtcataa tcgcattacg ttctttcaaa tatgctctac
    43141 ctttgtcagt taaggttatg aatttcaaac gttgatcaat atttaaattt ggtttatcta
    43201 acttaactaa tttagcatcg attaactttt taattcgtcg gcttactgcg gccttattta
    43261 caccttgtct ttgcgtgatt tcactaattg tcaaaggttc tttatttaac atacctaata
    43321 cgttagactg ctctaatgaa atttcatatt cattttgtaa atctttcaac atttttgcag
    43381 ttaatgcgtt aacgttattt ataaactgct ctaaaaattg aatatggtct tgtaaatgtt
    43441 ttaccataat tatttctccc taattactat ttttataaag tatcctcagc aatcattgta
    43501 tcgcacatct aaaaaacaca aaaatattga cccatatata atataacaaa ttaagattta
    43561 catgttgctg ctttctcctt gctttaataa attaaatcat ctacatttat atttaatatt
    43621 tattataagc gaggtgtcag tatgttattg aatttattat taatatttat acttatcgtt
    43681 atttgtccgt taattttcaa ctatactctg acgttaaatt taacatgcta catcttagtt
    43741 gtcatatcga tatttttgtc actcatctat agcatcatga cctatacttt cccttggtct
    43801 atgtttgtaa catttataat aatcagtatt atcatgctat tcaaacatag atatttattt
    43861 tctcatactt ctagtcgctt atttattaaa aaattattat ctttttcata taaatttgta
    43921 ctctacacat cagcacttct atttataagt acgattcagt cacctattgt gaaaggtttg
    43981 tctatgtggt tagctatatt atgtctttcc ctgttactaa cctttatttg ttatctcgtt
    44041 tggacagtat catatagaca tagatcatac aacaaagaag ttgatatcat aattgtgtta
    44101 ggtgctggta tttttaccga atttgtcaca ccaatgcttg cagcgcgttt agatcgtgca
    44161 cttgatatct atcaacaaca agcatcagca acaaagatca ttgtatctgg cggacaagga
    44221 ccagacgaac caatttctga agctttagct atgcaacgtt atttgattgc acatggtgtt
    44281 gataaaacag atatactaat ggaatctcac tctataaata catacacaaa ctttttatat
    44341 tctaaacaaa tcatcaacaa tttgtatcat gaagcagtta aaattgtttg tgtaacaagt
    44401 cagtttcatg tattgcgcgc cttacgacta gcccaaaaat taggtttatc tatcgatggt
    44461 gtcggaagtc atacaccata tcactttttc ttacatgtgc tcatcaaaga ttatctaggc
    44521 gtaatgtatc agtatagatt gttattaacg ttatattgtt caagtagttg gtttatatgt
    44581 ctttacgccg cttttattta taatagttaa tccacaaaca aactattatt ataggttgtt
    44641 tctaatattg cgtcaaacta tctttaaata ttcgttaatc cttgattaga caattgttat
    44701 attgaaaata aataaactaa agagtctggg acattaatcc ctaaaaaaaa cagcagtaag
    44761 ataattttca attagaaaat atcttactgc tgttctctat ttatacaata cttcgtattg
    44821 aatggcttcg ctatgcccat ctggcacatt actgtaaaat tctataaata gaatttttga
    44881 tgacgggtcc cttcctaggg tgccgtctca gccaccccaa ccggcacatt gttgtaagct
    44941 gactatatgt cagcttctgt gttggggccc ctgtcttcga ctggcactgc tccctcagga
    45001 gtctcgccat taatactacg tattaacatg taattttact tttaaatact ttaaaaaaat
    45061 aagacacttt ggccaactta agccaggata caatttacaa atagcgac
//
LOCUS       DALPQQ010000007        44293 bp    DNA     linear   BCT 22-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus strain K18-6-464
            SAMD00233528-rid16434743.denovo.007, whole genome shotgun sequence.
ACCESSION   DALPQQ010000007 DALPQQ010000000
VERSION     DALPQQ010000007.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMD00233528
            Sequence Read Archive: DRR236061
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 44293)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 44293)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001543423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001543423.1
            Genome Coverage       :: 77x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/22/2022 17:09:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,811
            CDSs (total)                      :: 2,743
            Genes (coding)                    :: 2,689
            CDSs (with protein)               :: 2,689
            Genes (RNA)                       :: 68
            rRNAs                             :: 2, 4, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 4, 2 (16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 54
            CDSs (without protein)            :: 54
            Pseudo Genes (ambiguous residues) :: 0 of 54
            Pseudo Genes (frameshifted)       :: 27 of 54
            Pseudo Genes (incomplete)         :: 27 of 54
            Pseudo Genes (internal stop)      :: 10 of 54
            Pseudo Genes (multiple problems)  :: 10 of 54
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..44293
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMD00233528-rid16434743.denovo.007"
                     /strain="K18-6-464"
                     /db_xref="taxon:1280"
                     /geo_loc_name="Japan: Niigata"
     gene            431..631
                     /locus_tag="O7798_000331"
     CDS             431..631
                     /locus_tag="O7798_000331"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001059082.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cold-shock protein"
                     /protein_id="HDC2862611.1"
                     /translation="MNNGTVKWFNAEKGFGFIEQENGGDVFVHFSGIASDGYKTLEEG
                     QKVTFEITEGQRGDQAVNVQTV"
     gene            complement(758..1327)
                     /locus_tag="O7798_000332"
     CDS             complement(758..1327)
                     /locus_tag="O7798_000332"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501492.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HDC2862612.1"
                     /translation="MNLSKQIKKYRERDGYSQEYLAEKLYVSRQSISNWENDKSLPDI
                     HNLLMMCELFNVTLDDLVKGTIPFVPDIKAQRSLNLWTYVMLIFMTLAAILMGPLVVY
                     WNWTWGVTVAIILGIGFYASMKIEDLKKVHKMDNYDRIVAFMNGKDPSEVQTTKARNT
                     MTNALSIISVIGILSLIIFLSVYLANKFL"
     gene            complement(1587..1982)
                     /locus_tag="O7798_000333"
     CDS             complement(1587..1982)
                     /locus_tag="O7798_000333"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501493.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3147 family protein"
                     /protein_id="HDC2862613.1"
                     /translation="MKLTLMKFFVGGFAVLLSYIVSVTLPWKEFGGIFATFPAVFLVS
                     MFITGMQYGDKVAVHVSRGAVFGMTGVLVCILVTWMMLHMTHMWLISIVVGFLSWFIS
                     AVCIFEAVEFIAQKRLEKHSWKAGKSNSK"
     gene            complement(2050..2403)
                     /locus_tag="O7798_000334"
     CDS             complement(2050..2403)
                     /locus_tag="O7798_000334"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501494.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3147 family protein"
                     /protein_id="HDC2862614.1"
                     /translation="MFSIGSAILHFVIGGIAVALASIIADKVGGKLGGIIATMPAVFL
                     AAIIALALDHRGTQLVEMSMNLSTGAIVGILSCILTVFLTSLYIKHKGYRKGAIFTVV
                     CWFVISLAIFSIRHL"
     gene            complement(2856..3695)
                     /gene="noc"
                     /locus_tag="O7798_000335"
     CDS             complement(2856..3695)
                     /gene="noc"
                     /locus_tag="O7798_000335"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501495.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleoid occlusion protein"
                     /protein_id="HDC2862615.1"
                     /translation="MKKPFSKLFGLKNKDDIIGHIEEDRNSNVESIQIERIVPNRYQP
                     RQVFEPNKIKELAESIHEHGLLQPIVVRPIEEDMFEIIAGERRFRAIQSLNLPQADVI
                     IRDMDDEETAVVALIENIQRENLSVVEEAEAYKKLLEIGDTTQSELAKSLGKSQSFIA
                     NKLRLLKLAPKVLLRLREGKITERHARAVLSLSDSEQEALIEQVIAQKLNVKQTEDRV
                     RQKTGPEKVKAQNLRFAQDVTQARDEVGKSIQAIQQTGLHVEHKDKDHEDYYEIKIRI
                     YKR"
     gene            complement(3738..4457)
                     /gene="rsmG"
                     /locus_tag="O7798_000336"
     CDS             complement(3738..4457)
                     /gene="rsmG"
                     /locus_tag="O7798_000336"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501496.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA (guanine(527)-N(7))-methyltransferase
                     RsmG"
                     /protein_id="HDC2862616.1"
                     /translation="MTVEWLAEQLKEHNIQLTETQKQQFQTYYRLLVEWNEKMNLTSI
                     TDEHDVYLKHFYDSIAPSFYFDFNQPISICDVGAGAGFPSIPLKIMFPQLKVTIVDSL
                     NKRIQFLNHLASELQLQDVSFIHDRAETFGKGVYRESYDVVTARAVARLSVLSELCLP
                     LVKKGGQFVALKSSKGEEELEEAKFAISVLGGNVTETHTFELPEDAGERQMFIIDKKR
                     QTPKKYPRKPGTPNKTPLLEK"
     gene            complement(4457..6334)
                     /gene="mnmG"
                     /locus_tag="O7798_000337"
     CDS             complement(4457..6334)
                     /gene="mnmG"
                     /locus_tag="O7798_000337"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501497.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA uridine-5-carboxymethylaminomethyl(34)
                     synthesis enzyme MnmG"
                     /protein_id="HDC2862617.1"
                     /translation="MVQEYDVIVIGAGHAGVEAGLASARRGAKTLMLTINLDNIAFMP
                     CNPSVGGPAKGIVVREIDALGGQMAKTIDKTHIQMRMLNTGKGPAVRALRAQADKVLY
                     QQEMKRVIEDEENLHIMQGMVDELIIEDNEVKGVRTNIGTEYLSKAVIITTGTFLRGE
                     IILGNMKYSSGPNHQLPSITLSDNLRELGFDIVRFKTGTPPRVNSKTIDYSKTEIQPG
                     DDVGRAFSFETTEYILDQLPCWLTYTNAETHKVIDDNLHLSAMYSGMIKGTGPRYCPS
                     IEDKFVRFNDKPRHQLFLEPEGRNTNEVYVQGLSTSLPEHVQRQMLETIPGLEKADMM
                     RAGYAIEYDAIVPTQLWPTLETKMIKNLYTAGQINGTSGYEEAAGQGLMAGINAAGKV
                     LNTGEKILSRSDAYIGVLIDDLVTKGTNEPYRLLTSRAEYRLLLRHDNADLRLTDMGY
                     ELGMISEERYARFNEKRQQIDAEIKRLSDIRIKPNEHTQAIIEQHGGSRLKDGILAID
                     LLRRPEMTYDIILELLEEEHQLNADVEEQVEIQTKYEGYINKSLQQVEKVKRMEEKKI
                     PEDLDYSKIDSLATEAREKLSEVKPLNIAQASRISGVNPADISILLIYLEQGKLQRVS
                     D"
     gene            complement(6401..7780)
                     /gene="mnmE"
                     /locus_tag="O7798_000338"
     CDS             complement(6401..7780)
                     /gene="mnmE"
                     /locus_tag="O7798_000338"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501498.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA uridine-5-carboxymethylaminomethyl(34)
                     synthesis GTPase MnmE"
                     /protein_id="HDC2862618.1"
                     /translation="MDLDTITSISTPMGEGAIGIVRLSGPQAVEIADKLYKGKHLLND
                     VPSHTINYGHIIDPESKEVVEEVMVSVLRAPKTFTREDIIEINCHGGILTINRVLELT
                     MTYGARMAEPGEFTKRAFLNGRIDLSQAEAVMDFIRSKTDRASKVAMNQIEGRLSDLI
                     KKQRQSILEILAQVEVNIDYPEYDDVEDATTEFLLEQSKEIKQEINRLLDTGAQGKIM
                     REGLSTVIVGKPNVGKSSMLNNLIQDNKAIVTEVAGTTRDVLEEYVNVRGVPLRLVDT
                     AGIRETEDIVEKIGVERSRKALSQADLILFVLNNNEALTQEDYTLYEVVKNEDVIVIV
                     NKMDLEQNIDINEVKDMIGDTPLIQTSMLKQEGIDELEIQIRDLFFGGEVQNQDMTYV
                     SNSRHISLLKQARQTIQDAIDAAESGVPMDMVQIDLTRTWEILGEIIGETASDELIDQ
                     LFSQFCLGK"
     gene            complement(7919..8272)
                     /gene="rnpA"
                     /locus_tag="O7798_000339"
     CDS             complement(7919..8272)
                     /gene="rnpA"
                     /locus_tag="O7798_000339"
                     /EC_number="3.1.26.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501499.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease P protein component"
                     /protein_id="HDC2862619.1"
                     /translation="MLLEKAYRIKKNADFQRIYKKGHSVANRQFVVYTCNNKEIDHFR
                     LGISVSKKLGNAVLRNKIKRAIRENFKVHKSHILAKDIIVIARQPAKDMTTLQIQNSL
                     EHVLKIAKVFNKKIK"
     gene            complement(8393..8530)
                     /gene="rpmH"
                     /locus_tag="O7798_000340"
     CDS             complement(8393..8530)
                     /gene="rpmH"
                     /locus_tag="O7798_000340"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000240855.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L34"
                     /protein_id="HDC2862620.1"
                     /translation="MVKRTYQPNKRKHSKVHGFRKRMSTKNGRKVLARRRRKGRKVLS
                     A"
     gene            9261..10622
                     /gene="dnaA"
                     /locus_tag="O7798_000341"
     CDS             9261..10622
                     /gene="dnaA"
                     /locus_tag="O7798_000341"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498609.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chromosomal replication initiator protein DnaA"
                     /protein_id="HDC2862621.1"
                     /translation="MSEKEIWEKVLEIAQEKLSAVSYSTFLKDTELYTIKDGEAIVLS
                     SIPFNANWLNQQYAEIIQAILFDVVGYEVKPHFITTEELANYSNNETATPKETTKPST
                     ETTEDNHVLGREQFNAHNTFDTFVIGPGNRFPHAASLAVAEAPAKAYNPLFIYGGVGL
                     GKTHLMHAIGHHVLDNNPDAKVIYTSSEKFTNEFIKSIRDNEGEAFRERYRNIDVLLI
                     DDIQFIQNKVQTQEEFFYTFNELHQNNKQIVISSDRPPKEIAQLEDRLRSRFEWGLIV
                     DITPPDYETRMAILQKKIEEEKLDIPPEALNYIANQIQSNIRELEGALTRLLAYSQLL
                     GKPITTELTAEALKDIIQAPKSKKITIQDIQKIVGQYYNVRIEDFSAKKRTKSIAYPR
                     QIAMYLSRELTDFSLPKIGEEFGGRDHTTVIHAHEKISKDLKEDPIFKQEVENLEKEI
                     RNV"
     gene            10900..12033
                     /gene="dnaN"
                     /locus_tag="O7798_000342"
     CDS             10900..12033
                     /gene="dnaN"
                     /locus_tag="O7798_000342"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000969809.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit beta"
                     /protein_id="HDC2862622.1"
                     /translation="MMEFTIKRDYFITQLNDTLKAISPRTTLPILTGIKIDAKEHEVI
                     LTGSDSEISIEITIPKTVDGEDIVNISETGSVVLPGRFFVDIIKKLPGKDVKLSTNEQ
                     FQTLITSGHSEFNLSGLDPDQYPLLPQVSRDDAIQLSVKVLKNVIAQTNFAVSTSETR
                     PVLTGVNWLIQENELICTATDSHRLAVRKLQLEDVSENKNVIIPGKALAELNKIMSDN
                     EEDIDIFFASNQVLFKVGNVNFISRLLEGHYPDTTRLFPENYEIKLSIDNGEFYHAID
                     RASLLAREGGNNVIKLSTGDDVVELSSTSPEIGTVKEEVDANDVEGGSLKISFNSKYM
                     MDALKAIDNDEVEVEFFGTMKPFILKPKGDDSVTQLILPIRTY"
     gene            12414..12659
                     /gene="yaaA"
                     /locus_tag="O7798_000343"
     CDS             12414..12659
                     /gene="yaaA"
                     /locus_tag="O7798_000343"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498611.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S4 domain-containing protein YaaA"
                     /protein_id="HDC2862623.1"
                     /translation="MIILVQEVVVEGDINLGQFLKTEGIIESGGQAKWFLQDVEVLIN
                     GVRETRRGKKLEHQDRIDIPELPEDAGSFLIIHQGEQ"
     gene            12656..13768
                     /gene="recF"
                     /locus_tag="O7798_000344"
     CDS             12656..13768
                     /gene="recF"
                     /locus_tag="O7798_000344"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498612.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA replication/repair protein RecF"
                     /protein_id="HDC2862624.1"
                     /translation="MKLNTLQLENYRNYDEVTLKCHPDVNILIGENAQGKTNLLESIY
                     TLALAKSHRTSNDKELIRFNADYAKIEGELSYRHGTMPLTMFITKKGKQVKVNHLEQS
                     RLTQYIGHLNVVLFAPEDLNIVKGSPQIRRRFIDMELGQISAVYLNDLAQYQRILKQK
                     NNYLKQLQLGQKKDLTMLEVLNQQFAEYAMKVTDKRAHFIQELESLAKPIHAGITNDK
                     EALSLNYLPSLKFDYAQNEAARLEEIMSILSDNMQREKERGISLFGPHRDDISFDVNG
                     MDAQTYGSQGQQRTTALSIKLAEIELMNIEVGEYPILLLDDVLSELDDSRQTHLLSTI
                     QHKVQTFVTTTSVDGIDHEIMNNAKLYRINQGEIIK"
     gene            13778..15712
                     /gene="gyrB"
                     /locus_tag="O7798_000345"
     CDS             13778..15712
                     /gene="gyrB"
                     /locus_tag="O7798_000345"
                     /EC_number="5.6.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498613.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA topoisomerase (ATP-hydrolyzing) subunit B"
                     /protein_id="HDC2862625.1"
                     /translation="MVTALSDVNNTDNYGAGQIQVLEGLEAVRKRPGMYIGSTSERGL
                     HHLVWEIVDNSIDEALAGYANQIEVVIEKDNWIKVTDNGRGIPVDIQEKMGRPAVEVI
                     LTVLHAGGKFGGGGYKVSGGLHGVGSSVVNALSQDLEVYVHRNETIYHQAYKKGVPQF
                     DLKEVGTTDKTGTVIRFKADGEIFTETTVYNYETLQQRIRELAFLNKGIQITLRDERD
                     EENVREDSYHYEGGIKSYVELLNENKEPIHDEPIYIHQSKDDIEVEIAIQYNSGYATN
                     LLTYANNIHTYEGGTHEDGFKRALTRVLNSYGLSSKIMKEEKDRLSGEDTREGMTAII
                     SIKHDDPQFEGQTKTKLGNSEVRQVVDKLFSEHFERFLYENPQVARTVVEKGIMAARA
                     RVAAKKAREVTRRKSALDVASLPGKLADCSSKSPEECEIFLVEGDSAGGSTKSGRDSR
                     TQAILPLRGKILNVEKARLDRILNNNEIRQMITAFGTGIGGDFDLAKARYHKIVIMTD
                     ADVDGAHIRTLLLTFFYRFMRPLIEAGYVYIAQPPLYKLTQGKQKYYVYNDRELDKLK
                     SELNPTPKWSIARYKGLGEMNADQLWETTMNPEHRALLQVKLEDAIEADQTFEMLMGD
                     VVENRRQFIEDNAVYANLDF"
     gene            15749..18412
                     /gene="gyrA"
                     /locus_tag="O7798_000346"
     CDS             15749..18412
                     /gene="gyrA"
                     /locus_tag="O7798_000346"
                     /EC_number="5.6.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498614.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA gyrase subunit A"
                     /protein_id="HDC2862626.1"
                     /translation="MAELPQSRINERNITSEMRESFLDYAMSVIVARALPDVRDGLKP
                     VHRRILYGLNEQGMTPDKSYKKSARIVGDVMGKYHPHGDSSIYEAMVRMAQDFSYRYP
                     LVDGQGNFGSMDGDGAAAMRYTEARMTKITLELLRDINKDTIDFIDNYDGNEREPSVL
                     PARFPNLLANGASGIAVGMATNIPPHNLTELINGVLSLSKNPDISIAELMEDIEGPDF
                     PTAGLILGKSGIRRAYETGRGSIQMRSRAVIEERGGGRQRIVVTEIPFQVNKARMIEK
                     IAELVRDKKIDGITDLRDETSLRTGVRVVIDVRKDANASVILNNLYKQTPLQTSFGVN
                     MIALVNGRPKLINLKEALVHYLEHQKTVVRRRTQYNLRKAKDRAHILEGLRIALDHID
                     EIISTIRESDTDKVAMESLQQRFKLSEKQAQAILDMRLRRLTGLERDKIEAEYNELLN
                     YISELEAILADEEVLLQLVRDELTEIRDRFGDDRRTEIQLGGFEDLEDEDLIPEEQIV
                     ITLSHNNYIKRLPVSTYRAQNRGGRGVQGMNTLEEDFVSQLVTLSTHDHVLFFTNKGR
                     VYKLKGYEVPELSRQSKGIPVVNAIELENDEVISTMIAVKDLESEDNFLVFATKRGVV
                     KRSALSNFSRINRNGKIAISFREDDELIAVRLTSGQEDILIGTSHASLIRFPESTLRP
                     LGRTATGVKGITLREGDEVVGLDVAHANSVDEVLVVTENGYGKRTPVNDYRLSNRGGK
                     GIKTATITERNGNVVCITTVTGEEDLMIVTNAGVIIRLDVADISQNGRAAQGVRLIRL
                     GDDQFVSTVAKVKEDAEDETNEDEQSTSTVSEDGTEQQREAVVNDETPGNAIHTEVID
                     SEENDEDGRIEVRQDFMDRVEEDIQQSSDEE"
     gene            complement(18499..19311)
                     /locus_tag="O7798_000347"
     CDS             complement(18499..19311)
                     /locus_tag="O7798_000347"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002461649.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H-hydrate dehydratase"
                     /protein_id="HDC2862627.1"
                     /translation="METLNSINIPKRKEDSHKGDYGKILLIGGSANLGGAIMLAARAC
                     VFSGSGLITVATHPTNHSALHSRCPEAMVIDINDTKMLTKMIEMTDSILIGPGLGVDF
                     KGNNAITFLLQNIQPHQNLIVDGDAITIFSKLKPQLPTCRVIFTPHLKEWERLSGIPI
                     EEQTYERNREAVDRLGATVVLKKHGTEIFFKDEDFKLTIGSPAMATGGMGDTLAGMIT
                     SFVGQFDNLKEAVMSATYTHSFIGENLAKDMYVVPPSRLINEIPYAMKQLES"
     gene            19637..21151
                     /gene="hutH"
                     /locus_tag="O7798_000348"
     CDS             19637..21151
                     /gene="hutH"
                     /locus_tag="O7798_000348"
                     /EC_number="4.3.1.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498616.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidine ammonia-lyase"
                     /protein_id="HDC2862628.1"
                     /translation="MTLYLDGETLTIEDIKSFLQQQSKIEIIDDALERVKKSRAVVER
                     IIENEETVYGITTGFGLFSDVRIDPTQYNELQVNLIRSHACGLGEPFSKEVALVMMIL
                     RLNTLLKGHSGATLELVRQLQFFINERIIPIIPQQGSLGASGDLAPLSHLALALIGEG
                     KVLYRGEEKDSDDVLRELNRQPLNLQAKEGLALINGTQAMTAQGVISYIEAEDLGYQS
                     EWIAALTHQSLNGIIDAYRHDVHAVRNFQEQINVAARMRDWLEGSTLTTRQSEIRVQD
                     AYTLRCIPQIHGASFQVFNYVKQQLEFEMNAANDNPLIFEEANETFVISGGNFHGQPI
                     AFALDHLKLGVSELANVSERRLERLVNPQLNGDLPAFLSPEPGLQSGAMIMQYAAASL
                     VSENKTLAHPASVDSITSSANQEDHVSMGTTAARHGYQIIENARRVLAIECVIALQAA
                     ELKGVEGLSPKTRRKYDEFRSIVPSITHDRQFHKDIEAVAQYLKQSIYQTTACH"
     misc_binding    21224..21440
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00230"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="T-box leader; Derived by automated computational
                     analysis using gene prediction method: cmsearch."
                     /bound_moiety="tRNA"
                     /db_xref="RFAM:RF00230"
     gene            21530..22816
                     /gene="serS"
                     /locus_tag="O7798_000349"
     CDS             21530..22816
                     /gene="serS"
                     /locus_tag="O7798_000349"
                     /EC_number="6.1.1.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498617.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine--tRNA ligase"
                     /protein_id="HDC2862629.1"
                     /translation="MLDIRLFRNEPDTVKSKIELRGDDPKVVDEILELDEQRRKLISA
                     TEEMKARRNKVSEEIALKKRNKENADDVIAEMRTLGDDIKEKDSQLNEIDNKMTGILC
                     RIPNLISDDVPQGESDEDNVEVKKWGTPREFSFEPKAHWDIVEELKMADFDRAAKVSG
                     ARFVYLTNEGAQLERALMNYMITKHTTQHGYTEMMVPQLVNADTMYGTGQLPKFEEDL
                     FKVEKEGLYTIPTAEVPLTNFYRNEIIQPGVLPEKFTGQSACFRSEAGSAGRDTRGLI
                     RLHQFDKVEMVRFEQPEDSWNALEEMTTNAEAILEELGLPYRRVILCTGDIGFSASKT
                     YDLEVWLPSYNDYKEISSCSNCTDFQARRANIRFKRDKAAKPELAHTLNGSGLAVGRT
                     FAAIVENYQNEDGTVTIPEALVPFMGGKTQISKPVK"
     gene            23466..24161
                     /locus_tag="O7798_000350"
     CDS             23466..24161
                     /locus_tag="O7798_000350"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498618.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AzlC family ABC transporter permease"
                     /protein_id="HDC2862630.1"
                     /translation="MTTHLSFRQGVQECIPTLLGYAGVGISFGIVASSQNFSILEIVL
                     LCLVIYAGAAQFIMCALFIAGTPISAIVLTVFIVNSRMFLLSMSLAPNFKTYGFWNRV
                     GLGSLVTDETFGVAITPYLKGEAINDRWMHGLNITAYLFWAISCVAGALFGEYISNPQ
                     TLGLDFAITAMFIFLAIAQFESITKSRLRIYIVLIIAVIVMMLSLSMFMPSYLAILIA
                     ATISAALGVMMEQ"
     gene            24158..24487
                     /locus_tag="O7798_000351"
     CDS             24158..24487
                     /locus_tag="O7798_000351"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498619.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AzlD domain-containing protein"
                     /protein_id="HDC2862631.1"
                     /translation="MITHMNMLILILLCGIVTLLIRIIPFIMISKVQLPDVVVRWLSF
                     IPITLFTALVIDSIIQQTPHGEGYTLNIPYIIALIPTVILSIITRSLTITIISGIVIM
                     AALRFFF"
     regulatory      24692..24790
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00162"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="SAM riboswitch class I; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /bound_moiety="S-adenosylmethionine"
                     /db_xref="RFAM:RF00162"
     gene            24850..25818
                     /locus_tag="O7798_000352"
     CDS             24850..25818
                     /locus_tag="O7798_000352"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498620.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta fold hydrolase"
                     /protein_id="HDC2862632.1"
                     /translation="MTNYTVDTLNLGEFITESGEVIDNLRLRYEHVGYHGQPLVVVCH
                     ALTGNHLTYGTDDYPGWWREIIDGGYIPIHDYQFLTFDVIGSPFGSSSPLNDPHFPKK
                     LTLRDIVRANERGIQALGYDKINILIGGSLGGMQAMELLYNQQFEVDKAIILAATSRT
                     SSYSRAFNEIARQAIHLGGKEGLSIARQLGFLTYRSSKSYDERFTPDEVVAYQQHQGN
                     KFKEHFDLNCYLTLLDVLDSHNIDRGRTDVTHVFKNLETKVLTMGFIDDLLYPDDQVR
                     ALGERFKYHRHFFVPDNVGHDGFLLNFSTWAPNLYHFLNLKHFKRK"
     gene            26109..27047
                     /locus_tag="O7798_000353"
     CDS             26109..27047
                     /locus_tag="O7798_000353"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498621.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YybS family protein"
                     /protein_id="HDC2862633.1"
                     /translation="MGVAYVFSKIQPKATIIATIALVFVALALYLVPGLGLIFALFAT
                     IPGIVLWNKSIQSFGISALITVIITTVLGNTFVLSAIILVLIASLIIGQLLKERTSKE
                     RILYVTTVAMSLISLIAFMLLQTFGRIPPSASIVKPFKQTLHEAITMSGADANMTQIL
                     EEGFRQATVQLPGFIIIITFLIVLINLIVTFPILRKFKIATPVFKPLFAWQMSGILLW
                     IYIIVIICLLFTGQPSVFQSILLNFQLVLSLVMYIQGLSVIHFFGKAKGLPNAVTILL
                     LVIGTILTPTTHIVGLLGVIDLSLNLKRIMKNNSKK"
     gene            27062..29029
                     /gene="gdpP"
                     /locus_tag="O7798_000354"
     CDS             27062..29029
                     /gene="gdpP"
                     /locus_tag="O7798_000354"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498622.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cyclic-di-AMP phosphodiesterase GdpP"
                     /protein_id="HDC2862634.1"
                     /translation="MNRQSTKKALLIPFVIMIITAIVLMGVWFIFNSLIALIASIVLV
                     VMIIVSIILFRQALMKMDSYVDGLSAQISTTNNKAIKHLPIGIIVLDENDHIEWVNQF
                     MTDHMEANVISESVNEVFPNILKQLDRVKSVEIEYNQYHFQVRYSENDHCLYFFDITE
                     QVQTNELYENSKPIIATLFLDNYDEITQNMNDTQRSEINSMVTRVISRWATEYNIFFK
                     RYSSDQFVAYLNQKILADLEESKFDILSQLREKSVGYRAQLTLSIGVGEGTENLIDLG
                     ELSQSGLDLALGRGGDQVAIKSINGNVRFYGGKTDPMEKRTRVRARVISHALKDILAE
                     GDKVIIMGHKRPDLDAIGAAIGVSRFAMMNNLEAYIVLNETDIDPTLRRVMNEIDKKP
                     ELRERFITSDDAWDMMTSKTTVVIVDTHKPELVLDENVLNKANRKVVIDHHRRGESFI
                     SNPLLIYMEPYASSTAELVTELLEYQPTEQRLTRLESTVMYAGIIVDTRNFTLRTGSR
                     TFDAASYLRAHGADTILTQHFLKDDVDTYINRSELIRTVKVEDNGIAIAHGSDDKIYH
                     PVTVAQAADELLSLEGIEASYVVARREDNLIGISARSLGSVNVQLTMEALGGGGHLTN
                     AATQLKGVTVEEAIAQLQQAITEQLSRSEDA"
     gene            29026..29472
                     /gene="rplI"
                     /locus_tag="O7798_000355"
     CDS             29026..29472
                     /gene="rplI"
                     /locus_tag="O7798_000355"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498623.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L9"
                     /protein_id="HDC2862635.1"
                     /translation="MKVIFTQDVKGKGKKGEVKEVPVGYANNFLLKKNYAVEATPGNL
                     KQLELQKKRAKQERQQEIEDAKALKETLSNIEVEVSAKTGEGGKLFGSVSTKQIAEAL
                     KAQHDIKIDKRKMDLPNGIHSLGYTNVPVKLDKEVEGTIRVHTVEQ"
     gene            29504..30904
                     /gene="dnaB"
                     /locus_tag="O7798_000356"
     CDS             29504..30904
                     /gene="dnaB"
                     /locus_tag="O7798_000356"
                     /EC_number="3.6.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498624.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="replicative DNA helicase"
                     /protein_id="HDC2862636.1"
                     /translation="MDRMYEQNQMPHNNEAEQSVLGSIIIDPELINTTQEVLLPESFY
                     RGAHQHIFRAMMHLNEDNKEIDVVTLMDQLSTEGTLNEAGGPQYLAELSTNVPTTRNV
                     QYYTDIVSKHALKRRLIQTADSIANDGYNDELELDAILSDAERRILELSSSRESDGFK
                     DIRDVLGQVYETAEELDQNSGQTPGIPTGYRDLDQMTAGFNRNDLIILAARPSVGKTA
                     FALNIAQKVATHEDMYTVGIFSLEMGADQLATRMICSSGNVDSNRLRTGTMTEEDWSR
                     FTIAVGKLSRTKIFIDDTPGIRINDLRSKCRRLKQEHGLDMIVIDYLQLIQGSGSRAS
                     DNRQQEVSEISRTLKALARELECPVIALSQLSRGVEQRQDKRPMMSDIRESGSIEQDA
                     DIVAFLYRDDYYNRGGDEDDDDDGGFEPQTNDENGEIEIIIAKQRNGPTGTVKLHFMK
                     QYNKFTDIDYAHADMM"
     gene            31182..32465
                     /locus_tag="O7798_000357"
     CDS             31182..32465
                     /locus_tag="O7798_000357"
                     /EC_number="6.3.4.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498625.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adenylosuccinate synthase"
                     /protein_id="HDC2862637.1"
                     /translation="MSSIVVVGTQWGDEGKGKITDFLAEQSDVIARFSGGNNAGHTIQ
                     FGGETYKLHLVPSGIFYKDKLAVIGNGVVVDPVALLKELDGLNERGIPTSNLRISNRA
                     QVILPYHLAQDEYEERLRGDNKIGTTKKGIGPAYVDKVQRIGIRMADLLEKETFERLL
                     KSNIEYKQAYFKGMFNETCPSFDDIFEEYYAAGQRLKEFVTDTSKILDDAFVADEKVL
                     FEGAQGVMLDIDHGTYPFVTSSNPIAGNVTVGTGVGPTFVSKVIGVCKAYTSRVGDGP
                     FPTELFDEDGHHIREVGREYGTTTGRPRRVGWFDSVVLRHSRRVSGITDLSINSIDVL
                     TGLDTVKICTAYELDGKEITEYPANLDQLKRCKPIFEELPGWTEDVTNVRTLEELPEN
                     ARKYLERISELCNVQISIFSVGPDREQTNLLKELW"
     gene            32895..32969
                     /locus_tag="O7798_000358"
     tRNA            32895..32969
                     /locus_tag="O7798_000358"
                     /product="tRNA-Glu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:32928..32930,aa:Glu,seq:ttc)
     gene            32977..33049
                     /locus_tag="O7798_000359"
     tRNA            32977..33049
                     /locus_tag="O7798_000359"
                     /product="tRNA-Asp"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:33010..33012,aa:Asp,seq:gtc)
     gene            33671..34372
                     /locus_tag="O7798_000360"
     CDS             33671..34372
                     /locus_tag="O7798_000360"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498626.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HDC2862638.1"
                     /translation="MARKVVVVDDEKPIADILEFNLKKEGYDVYCAYDGNDAVDLIYE
                     EEPDIVLLDIMLPGRDGMEVCREVRKKYEMPIIMLTAKDSEIDKVLGLELGADDYVTK
                     PFSTRELIARVKANLRRHYSQPAQDTGNVTNEITIKDIVIYPDAYSIKKRGEDIELTH
                     REFELFHYLSKHMGQVMTREHLLQTVWGYDYFGDVRTVDVTIRRLREKIEDDPSHPEY
                     IVTRRGVGYFLQQHE"
     gene            34385..36211
                     /gene="walK"
                     /locus_tag="O7798_000361"
     CDS             34385..36211
                     /gene="walK"
                     /locus_tag="O7798_000361"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498627.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell wall metabolism sensor histidine kinase
                     WalK"
                     /protein_id="HDC2862639.1"
                     /translation="MKWLKQLQSLHTKLVIVYVLLIIIGMQIIGLYFTNNLEKELLDN
                     FKKNITQYAKQLEISIEKVYDEKGSVNAQKDIQNLLSEYANRQEIGEIRFIDKDQIII
                     ATTKQSNRSLINQKANDSSVQKALSLGQSNDHLILKDYGGGKDRVWVYNIPVKVDKKV
                     IGNIYIESKINDVYNQLNNINQIFIVGTAISLLITVILGFFIARTITKPITDMRNQTV
                     EMSRGNYTQRVKIYGNDEIGELALAFNNLSKRVQEAQANTESEKRRLDSVITHMSDGI
                     IATDRRGRIRIVNDMALKMLGMAKEDIIGYYMLSVLSLEDEFKLEEIQENNDSFLLDL
                     NEEEGLIARVNFSTIVQETGFVTGYIAVLHDVTEQQQVERERREFVANVSHELRTPLT
                     SMNSYIEALEEGAWKDEELAPQFLSVTREETERMIRLVNDLLQLSKMDNESDQINKEI
                     IDFNMFINKIINRHEMSAKDTTFIRDIPKKTIFTEFDPDKMTQVFDNVITNAMKYSRG
                     DKRVEFHVKQNPLYNRMTIRIKDNGIGIPINKVDKIFDRFYRVDKARTRKMGGTGLGL
                     AISKEIVEAHNGRIWANSVEGQGTSIFITLPCEVIEDGDWDE"
     gene            36204..37538
                     /locus_tag="O7798_000362"
     CDS             36204..37538
                     /locus_tag="O7798_000362"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001060131.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDC2862640.1"
                     /translation="MNNKEHIKSVILALLVLMSVVLTYMVWNFSPDIANVDNTDSKKS
                     ETKPLTTTMTAKMDTTITPFQIIHSKNDHPEGTIATVSNVNKLTKPLKNKEVKSVEHV
                     RRDHNLMIPDLNSDFILFDFTYDLPLSTYLGQVLNMNAKVPNHFNFNRLVIDHDADDN
                     IVLYAISKDRHDYVKLTTTTKNDHFLDALAAVKKDMQPYTDIITNKDTIDRTTHVFAP
                     SKPEKLKTYRMVFNTISVEKMNAILFDDSTIVRSSKSGVTTYNNNTGVANYNDKNEKY
                     HYKNLSEDEASSSKMEETIPGTFDFINGHGGFLNEDFRLFSTNNQSGELTYQRFLNGY
                     PTFNKEGSNQIQVTWGEKGVFDYRRSLLRTDVVLNSEDNKSLPKLESVRSSLANNSDI
                     NFEKVTNIAIGYEMQDNSDHNHIEVQINSELVPRWYVEYDGEWYVYNDGRLE"
     gene            37539..38327
                     /locus_tag="O7798_000363"
     CDS             37539..38327
                     /locus_tag="O7798_000363"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498629.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-component system regulatory protein YycI"
                     /protein_id="HDC2862641.1"
                     /translation="MNWKLTKTLFIFVFILVNIVLVSIYVNKVNRSHINEVESNNEVN
                     FQQEEIKVPTSILNKSVKGIKLEQITGRSKDFSSKAKGDSDLTTSDGGKLLNANISQS
                     VKVSDNNLKDLKDYVNKRVFKGAEYQLSEISSDSVKYEQTYDDFPILNNSKAMLNFNI
                     EDNKATSYKQSMMDDIKPTDGADKKHQVIGVRKAIEALYYNRYLKKGDEVINARLGYY
                     SVVNETNVQLLQPNWEIKVKHDGKDKTNTYYVEATNNNPKIINH"
     gene            38717..39517
                     /locus_tag="O7798_000364"
     CDS             38717..39517
                     /locus_tag="O7798_000364"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498630.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HDC2862642.1"
                     /translation="MSRLIRMSVLASGSTGNATFVENEKGSLLVDVGLTGKKMEELFS
                     QIDRNIQDLNGILVTHEHIDHIKGLGVLARKYQLPIYANEKTWQAIEKKDSRIPMDQK
                     FIFNPYETKSIAGFDVESFNVSHDAIDPQFYIFHNNYKKFTILTDTGYVSDRMKGMIR
                     GSDAFIFESNHDVDMLRMCRYPWKTKQRILGDMGHVSNEDAAHAMTDVITGNTKRIYL
                     SHLSQDNNMKDLARMSVGQVLNEHDIDTEKEVLLCDTDKAIPTPIYTI"
     gene            39745..42063
                     /gene="adsA"
                     /locus_tag="O7798_000365"
     CDS             39745..42063
                     /gene="adsA"
                     /locus_tag="O7798_000365"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498631.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LPXTG-anchored adenosine synthase AdsA"
                     /protein_id="HDC2862643.1"
                     /translation="MKALLLKTSVWLVLLFSVMGLWQVSNAAEQHTPMKAHAVTTIDK
                     ATTDKQQVPPTKEAAHHSGKEAATNVSASAQGTADDTNSKVTSNAPSNKPSTVVSTKV
                     NETRDVDTQQASTQKPTHTATFKLSNAKTASLSPRMFAANAPQTTTHKILHTNDIHGR
                     LAEEKGRVIGMAKLKTVKEQEKPDLMLDAGDAFQGLPLSNQSKGEEMAKAMNAVGYDA
                     MAVGNHEFDFGYDQLKKLEGILDFPMLSTNVYKDGKRAFKPSTIVTKNGIRYGIIGVT
                     TPETKTKTRPEGIKGVEFRDPLQSVTAEMMRIYKDVDTFVVISHLGIDPSTQETWRGD
                     YLVKQLSQNPQLKKRITVIDGHSHTVLQNGQIYNNDALAQTGTALANIGKITFNYRNG
                     EVSNIKPSLINVKDVENVTPNKALAEQINQADQTFRAQTAEVIIPNNTIDFKGERDDV
                     RTRETNLGNAIADAMEAYGVKNFSKKTDFAVTNGGGIRASIAKGKVTRYDLISVLPFG
                     NTIAQIDVKGSDVWTAFEHSLGAPTTQKDGKTVLTANGGLLHISDSIRVYYDINKPSG
                     KRINAIQILNKETGKFENIDLKRVYHVTMNDFTASGGDGYSMFGGPREEGISLDQVLA
                     SYLKTANLAKYDTTEPQRMLLGKPAVSEQPAKGQQGSKGSKSGKDTQPIGDDKVMDPA
                     KKPAPGKVVLLLAHRGTVSSGTEGSGRTIEGATVSSKSGKQLARMSVPKGSAHEKQLP
                     KTGTNQSSSPEAMFVLLAGIGLIATVRRRKAS"
     gene            42431..42910
                     /gene="rlmH"
                     /locus_tag="O7798_000366"
     CDS             42431..42910
                     /gene="rlmH"
                     /locus_tag="O7798_000366"
                     /EC_number="2.1.1.177"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020363758.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA
                     (pseudouridine(1915)-N(3))-methyltransferase RlmH"
                     /protein_id="HDC2862644.1"
                     /translation="MKITILAVGKLKEKYWKQAIAEYEKRLGPYTKIDIIEVPDEKAP
                     ENMSDKEIEQVKEKEGQRILAKIKPQSTVITLEIQGKMLSSEGLAQELNQRMTQGQSD
                     FVFVIGGSNGLHKDVLQRSNYALSFSKMTFPHQMMRVVLIEQVYRAFKIMRGEAYHK"
     gene            43232..>44293
                     /locus_tag="O7798_000367"
     CDS             43232..>44293
                     /locus_tag="O7798_000367"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001569336.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3578 domain-containing protein"
                     /protein_id="HDC2862645.1"
                     /translation="MIDNFMQVLKLIKEKRTNNVVKKSDWDKGDLYKTLVHDKLPKQL
                     KVHIKEDKYSVVGKVATGNYSKVPWISIYDENITKETKDGYYLVYLFHPEGEGIYLSL
                     NQGWSKISDMFPRDKNAAKQRALTLSSELNKYITSNEFNTGRFYYAENKDSSYDLKND
                     YPSGYSHGSIRFKYYDLNEGFTEEDMLEDLKKFLELFNELASKVTKTSYDSLVNSIDE
                     IQEDSEIEEIRTAQKDKTLKEVEAPKGIIPKYKKGVSKTTKNDSEIEKSNKENKLTGK
                     VGEKLALNYFNELIDNKIDEDKKEQFRNILNDNPGSQHGHGYDLVAFDPTNTDKAVEK
                     FIEIKTSTSSSIEEPFFMSL"
BASE COUNT        15406 a         7107 c         8132 g        13648 t
ORIGIN      
        1 cttattattt aaaacgtcgt gaagaaaaag gcaagtaagc acattccatc ggtatagaac
       61 attgctatga cctttcaagt cagattttaa tatcaacaag tagcgtttat cgctgcttgt
      121 tttttatgga ttgcttataa aatcatcatg tttaaacgat atgtcacttt gaaaactagc
      181 aaacaccata aaagactaca atttttttat ttttataaac ccctttaaat caacgtttct
      241 aaggttttta aaaatctttt ttaatttatt ttcaaaaaac actgtacatt atgccaatat
      301 gagcgtatag ttggtcttac gtaataaaag ctcgtgaatt aaattgtagt gtatttgttt
      361 agaatatcct cttttttagt tatgaatttg ttacaaatat taagtgcaaa agcacacgga
      421 ggttttctat atgaataacg gtacagtaaa atggtttaac gcagaaaaag gttttggttt
      481 catcgaacaa gaaaatggcg gagacgtatt cgtacatttc tcaggtatcg ctagcgatgg
      541 ctacaaaact ttagaagaag gtcaaaaagt tactttcgaa atcactgaag gtcaacgtgg
      601 agaccaagca gttaacgtac aaactgttta atcttacaac ataaaacgac tcattataaa
      661 tgaatcgctt tgattaccaa caaggttcta aatcttgttg gtattttttt atgctatttt
      721 ggataatata aataatatga gacgatacca cgatgattta taaaaactta tttgccaaat
      781 acacactaag gaaaattatg aggctgagta taccaattac tgatataata gaaagcgcat
      841 ttgtcatcgt atttctagct ttagtcgttt gtacttcact aggatctttt ccattcataa
      901 aagcaacaat tcgatcgtag ttgtccattt tatgcacttt ttttaaatct tctattttca
      961 tagatgcata aaaacctatt cccaaaatga ttgccaccgt tacaccccaa gtccaattcc
     1021 aataaacaac taaaggtccc attaaaattg cagctaatgt catgaaaata agcatcacat
     1081 atgtccataa gttaagactt cgttgcgctt taatatcagg tacaaatgga atggtccctt
     1141 ttactaaatc atctaaagtt acattgaaca attcacacat cattaataag ttatgtatgt
     1201 ctggtaagct tttgtcattt tcccaattag aaatactctg cctagataca tataactttt
     1261 cagcaagata ttcttgtgaa taaccatctc gttccctata ctttttaatt tgtttactca
     1321 gattcaatta catacgcctc cagtcaatta gtacaatcat tacaatcaga ctatcagata
     1381 aagttaaatc aagtcacctt tatgattgac taaatgtttt gacatacgac aacatcgggg
     1441 ttcgaagact cccttaagac agacctgtat gattacgcgc ttgtaatttt ctcaatgcca
     1501 acttgaattt cacttattaa tgatgcaact tttccatgct attcaatgct tgcaaagtta
     1561 gtcctagtta agagattacg ttcacactat ttactattcg attttccagc tttccaacta
     1621 tgcttttcta atcttttttg tgctataaat tctaccgctt caaaaataca tactgcactg
     1681 atgaaccagc ttaggaaacc aacaacaatg ctaatcaacc acatgtgcgt catatgtaac
     1741 atcatccatg taactaaaat acaaactaat acccctgtca taccaaacac tgcgccacga
     1801 cttacatgca cagcgacttt atcaccatat tgcatacctg taataaacat agacactaaa
     1861 aatactgccg gaaacgttgc aaatataccg ccaaattctt tccaaggtag tgttacagat
     1921 acaatataac ttaataatac tgcaaatccc cccacaaaaa atttcattaa tgttaatttc
     1981 atgatgttct gcctccaata atttattact taataactga atacaactaa ttatcacgca
     2041 ttttccaaac tataaatgtc taatactgaa tattgcgagg gaaatgacaa accaacaaac
     2101 aactgtgaat attgcgcctt tccgataacc tttatgctta atgtagagag atgtcaaaaa
     2161 tacagttaat atacaagaca gaataccgac aattgctcca gtactaagat tcatcgacat
     2221 ctccactaat tgcgtaccac gatgatctaa agctaatgcg ataatagccg caagaaagac
     2281 tgccggcata gtagctataa tacctcctaa cttaccacct accttatcag caataattga
     2341 agctaatgca acagcgatac caccaatgac aaaatgaaga attgcacttc caattgaaaa
     2401 catcttcaac gtacctttct ataattaatt caatacaaaa cgtatcattc acacaaagtg
     2461 taaaacttaa attttctact gtaaaggcaa ctcaagcgat gttcataaag ctttcatgat
     2521 actttcataa actagcaata aagggttcaa atgaaagtat atccagctca aattagggag
     2581 tgggacagaa atgatatttt cgcaaaattt atttcgtcgt cccaccccag caaggttgac
     2641 tagaattgaa aaaagcttgt tacaagcgca ttttcgttca gtcaactact gccaatataa
     2701 cttcgtagag catagaacat tgatttatgt accagcctga tcaacatata aatataaatt
     2761 tttatgtttc acgtaaaaca aaaaaaaaga caaagctgtt atgatcttag ctttgtcttt
     2821 tatgtgttag tcatcatgta tacgacatcc tactactaac gtttatatat tcgaattttt
     2881 atttcataat aatcttcatg atctttgtct ttatgctcaa catgtaatcc tgtttgttga
     2941 atcgcttgga tacttttgcc tacctcatct cgtgcttgag tgacatcttg tgcaaagcga
     3001 aggttttgtg ctttgacttt ttcgggcccc gttttttggc gtactctatc ttcagtctgt
     3061 ttcacattta gcttttgtgc aatgacttgc tcaatcaacg cttcttgttc gctatcagac
     3121 aatgataata ccgctctcgc atgacgttca gtaattttac cttctcttaa gcgaagtagt
     3181 actttcggcg ccaacttcaa taaacgcaac ttatttgcaa taaagctttg acttttacct
     3241 aaactttttg ccaattcact ttgcgttgta tcaccaattt ccaataattt cttataggct
     3301 tccgcttctt caacaacaga caaattttct ctttgaatat tctcaattaa tgcaacaaca
     3361 gccgtctctt catcatccat atcacgaata ataacgtctg cttgaggtaa atttagtgat
     3421 tgtattgctc taaatcggcg ctctccagca ataatttcaa acatatcttc ttcaatcggt
     3481 cttacaacaa taggttgtag taaaccatgt tcatgtattg attcagcaag ttctttaatt
     3541 ttatttggtt caaacacctg tcttggttga taacggttgg gaacgatacg ttcaatttga
     3601 atggattcaa cattactatt gcgatcttct tcaatatgtc caatgatgtc atctttgttt
     3661 ttcaaaccaa ataattttga aaaaggtttt ttcattatcc attcgctcct tttatgttag
     3721 ttgtaaagga ttatgcatta tttttcaagt aaaggagtct tattaggcgt ccctggtttt
     3781 cttggatact ttttcggcgt ctgtcttttt ttatcaataa tgaacatctg gcgctctcca
     3841 gcatcttctg gcaattcaaa ggtatgtgtt tctgtaacat taccacctaa cacactaatt
     3901 gcaaattttg cttcttctaa ttcttcttca ccttttgaag attttaatgc aacaaactgt
     3961 ccaccttttt taactagcgg taaacacaat tcacttaaca cggataatct agctactgct
     4021 cttgcagtaa caacatcata agactccctg tagacaccct taccaaatgt ttctgctcta
     4081 tcgtgtataa agctgacatc ctgtaattgt aattctgacg ctaaatggtt taaaaattga
     4141 atacgcttat ttaatgaatc aacaatcgtc acttttaact gcggaaacat tatttttaac
     4201 ggaatacttg gaaaaccagc tccagcgcct acatcacata tacttatagg ctgattaaaa
     4261 tcaaaataaa aactaggtgc aatggaatca taaaaatgtt tcaaatatac atcgtgttca
     4321 tctgtaatac ttgtcaaatt catcttttca ttccattcaa caagtaaacg ataatatgtt
     4381 tgaaactgtt gtttttgagt ctcagttaat tgaatattat gttcttttaa ttgttctgct
     4441 aaccattcta cagtcattag tcactcaccc tttggagttt accttgttct aagtaaatca
     4501 ataatataga tatgtctgct ggatttaccc ctgatattct agaagcttgt gcaatattta
     4561 aaggttttac ttctgataat ttttctcgcg cttcagtcgc caaactatca atcttactat
     4621 aatctaagtc ttctggaatt ttcttctctt ccatacgctt aactttctca acttgttgta
     4681 gtgatttatt gatataacct tcatattttg tttgtatttc tacttgttct tcaacatctg
     4741 cattcaattg atgttcttct tctaaaagtt ctaaaattat atcgtaagtc atttcaggtc
     4801 tgcgtaataa atcgatagct aaaataccat cttttaagcg agaaccacca tgttgttcaa
     4861 taatcgcttg cgtatgttcg tttggtttaa tacgaatatc tgataaacgc ttaatttccg
     4921 catcaatttg ctgacgtttt tcattaaaac gtgcatatct ttcttcagaa atcataccaa
     4981 gttcatatcc catatccgtc aatctcaaat cagcattatc atgacgtagt aacaaacgat
     5041 attctgcacg tgatgttagt aaacgataag gttcattagt acctttagtt acaagatcat
     5101 cgattaagac accaatatat gcatctgaac gacttaatat cttttcgcct gtgtttaaca
     5161 ctttacctgc agcgttaata cctgccatca atccttgtcc tgctgcttct tcataaccag
     5221 atgtaccatt aatttgacct gcagtatata agtttttaat cattttcgtt tcaagtgtag
     5281 gccataactg cgttggcaca atcgcatcat attcaattgc gtagccggca cgcatcatat
     5341 ctgctttttc aagacctggt atcgtctcta acatttgacg ttgcacatgt tcaggaagac
     5401 ttgtagacaa tccttgcaca tatacttcat ttgtattacg accttcaggc tctaagaaaa
     5461 gttgatgtcg cggcttatca ttaaatcgaa caaatttatc ttcaattgaa gggcaataac
     5521 gtggcccggt tcctttaatc atccctgaat acattgcaga tagatgtaaa ttatcatcga
     5581 taactttgtg tgtttcagca ttagtatacg ttagccaaca tggcaattga tctaatatat
     5641 attctgttgt ttcaaagctg aatgcacgac ctacatcgtc acctggttgt atttcagtct
     5701 tcgaatagtc aattgttttt gaatttacac gcggtggtgt acctgtttta aaacgaacaa
     5761 tatcaaaacc aagttctctt aaattgtctg ataatgtgat tgatggtaat tggtgatttg
     5821 gtccacttga atacttcata ttacctaaaa tgatttcacc acgtaaaaat gttcccgttg
     5881 taataattac tgctttagat aaatactctg taccaatatt tgtacgtaca cctttaactt
     5941 cattatcttc tataataagt tcgtctacca taccttgcat tatatgcaaa ttttcttcat
     6001 cttcaatcac gcgtttcatt tcttgttgat aaagtacttt atctgcttgc gctcttagtg
     6061 ctcttacagc aggtccttta cctgtattta acattctcat ttgaatgtgt gttttatcga
     6121 ttgtttttgc catttgtcca cctaaagcat caatttcacg aacaacgata cctttagctg
     6181 gtccacctac agatgggtta catggcataa atgcaatatt atctaaattt attgttagca
     6241 ttaatgtttt agcaccacgt cttgcagatg ctaaacctgc ttctacacct gcatgtcccg
     6301 cacctataac gattacatca tattcttgaa ccacaatata aacctcctta tttgatatct
     6361 tactagcctt cttaagacgg tattccgtct atttcaatta ctatttacct aagcagaatt
     6421 gactgaataa ctgatcgatg agttcatcac ttgcagtctc accaataatt tctcctaata
     6481 tttcccaagt tctagttaaa tcaatttgta ccatatccat aggcacacca gattctgctg
     6541 catcaatcgc atcttgtatc gtttgtcttg cttgttttaa taatgaaata tgtcttgaat
     6601 tagaaacata agtcatatct tgattttgta cttctccacc aaagaacaaa tctcgaattt
     6661 gtatttctaa ttcatcaata ccttcttgtt ttaacattga agtttgaatt aatggcgtat
     6721 cacctatcat atctttaact tcattaatat ctatgttttg ctctaaatcc attttattaa
     6781 caattacgat tacatcttca tttttaacca cttcatataa tgtgtaatct tcttgagtca
     6841 atgcttcgtt attgtttaat acaaataaaa ttaagtctgc ttggctaaga gcctttctag
     6901 agcgttcaac accaatcttc tctactatat cttctgtctc acgtatacca gcagtatcaa
     6961 ctaatcttaa tggcacgcca cgaacattga cgtactcttc taagacatct ctagtagtac
     7021 ctgctacctc agttacaatc gctttattat cttgtattaa attatttaac atcgatgatt
     7081 tacctacgtt tggtttacca acaataactg tagataaacc ttcacgcata attttaccct
     7141 gcgcaccggt atctaataaa cgattaattt cctgtttgat ttctttagac tgctctaaaa
     7201 gaaattcagt agtcgcatct tcaacatcat cgtattcagg ataatcaata ttcacttcca
     7261 cttgagcgag tatctctaat atagattgac gttgtttttt gattaagtca cttagacgac
     7321 cttcaatttg attcatcgca actttagaag ctctatctgt cttcgagcga ataaagtcca
     7381 taactgcttc agcttgagat aaatcaatac gaccatttaa aaaggcacgt tttgtaaatt
     7441 cacctggctc agccattcta gcgccatatg tcatagtaag ttccagcact ctattaatcg
     7501 ttaaaatacc accatgacaa ttaatttcta taatatcttc gcgtgtaaat gtttttggcg
     7561 ctcttaacac agacaccata acttcttcaa ccacttcttt agactctgga tcaataatat
     7621 gaccgtaatt aatcgtatgt gatggaacat catttaaaag atgttttcct ttatataatt
     7681 tgtcagcaat ttcaacggct tgcggtccag acaatcgaac aattccaatt gccccttcac
     7741 ccattggtgt tgaaatactc gtaattgtat ctaaatccat attgctactc gcctccttca
     7801 acgatgtgaa tacattttaa agtaagttat tataacccta aggtcagtct tacgtttgtc
     7861 tgaggtaaga cttcgggatg tgttgagtgg ttaatgtttt ccttccccta ccctatcctt
     7921 acttaatctt tttattaaaa actttggcaa ttttaagtac gtgctcaaga ctattctgta
     7981 tttgtaaagt cgtcatatct ttagctggct gtcttgctat tacaataata tctttggcca
     8041 atatatgcga cttatgtact ttgaaatttt cacgtattgc tcttttaatc ttgtttctta
     8101 acactgcatt acctagtttt ttagaaacac taatacctaa gcgaaaatgg tctatttctt
     8161 tattattaca agtgtataca acaaattgtc tgttggctac agaatgacct tttttatata
     8221 ttctctgaaa atctgcattc tttttaattc ggtaagcttt ttccaataac atcactcgct
     8281 tatttatcgt ttttatttga agctatattt aaacttctat tgagcttata acataaattt
     8341 ctatttattc ttaatttaaa cgaaaaaaaa gatcactgat gagtcagtga tcttatgcag
     8401 ataaaacttt acggccttta cgacgacggc gcgctaaaac tttacggcca ttttttgtgc
     8461 tcatgcgttt tctgaaacca tgaactttac tatgtttacg tttatttggt tgataagtac
     8521 gttttaccat gcaaaacacc tccatcttta tacagttatc taatatacca gattatgcag
     8581 actctgatca ctttaataga taagattttg cgtttcttag attaaaattc tcgtattagc
     8641 tcattgatta tctagtcata attcaagcaa ctactacaat ataacaaaat cctatttata
     8701 acgcaagttc attttatact actgctcaat ttttttactt ttatcgatta aagatagaaa
     8761 tacacgatgc gagcaatcaa atttcataac atcaccatga gtttggtccg aagcatgagt
     8821 gtttacaatg ttcgaacacc ttatacagtt cttatacata ctttataaat tatttcccaa
     8881 actgttttga tacactcact aacagatact ctatagaagg aaaagttatc cacttatgca
     8941 catttatagt tttcagaatt gtggataatt agaaattaca cacaaagtta tactattttt
     9001 agcaacatat tcacaggtat ttgacatata gagaactgaa aaagtataat tgtgtggata
     9061 agtcgtccaa ctcatgattt tataaggatt tatttattga tttttacata aaaatactgt
     9121 gcataactaa taagcaagat aaagttatcc accgattgtt attaacttgt ggataattat
     9181 taacatggtg tgtttagaag ttatccacgg ctgttatttt tgtgtataac ttaaaaattt
     9241 aagaaagatg gagtaaattt atgtcggaaa aagaaatttg ggaaaaagtg cttgaaattg
     9301 ctcaagaaaa attatcagct gtaagttact caactttcct aaaagatact gagctttaca
     9361 cgattaaaga tggtgaagct atcgtattat cgagtattcc ttttaatgca aattggttaa
     9421 atcaacaata tgctgaaatt atccaagcaa tcttatttga tgttgtaggc tatgaagtta
     9481 aacctcactt tattactact gaagaattag caaattatag taataatgaa actgctactc
     9541 caaaagaaac aacaaaacct tctactgaaa caactgagga taatcatgtg cttggtagag
     9601 agcaattcaa tgcccataac acatttgaca cttttgtaat cggacccggt aaccgctttc
     9661 cacatgcagc gagtttagct gtggccgaag caccagccaa agcgtacaat ccattattta
     9721 tctatggagg tgttggttta ggaaaaaccc atttaatgca tgccattggt catcatgttt
     9781 tagataataa tccagatgcc aaagtgattt acacatcaag tgaaaaattc acaaatgaat
     9841 ttattaaatc aattcgtgat aacgaaggtg aagctttcag agaaagatat cgtaatatcg
     9901 acgtcttatt aatcgatgat attcagttca tacaaaacaa ggtacaaaca caagaagaat
     9961 ttttctatac ttttaatgaa ttgcatcaga ataacaagca aatagttatt tcgagtgatc
    10021 gaccaccaaa ggaaattgca caattagaag accgattacg ttcacgcttt gaatgggggc
    10081 taattgttga tattacgcca ccagattatg aaactcgaat ggcaattttg cagaagaaaa
    10141 ttgaagaaga aaaattagat attccaccag aagctttaaa ttatatagca aatcaaattc
    10201 aatctaatat tcgtgaatta gaaggtgcat taacacgttt acttgcatat tcacaattat
    10261 taggaaaacc aattacaact gaattaactg ctgaagcttt aaaagatatc attcaagcac
    10321 caaaatctaa aaagattacc atccaagata ttcaaaaaat tgtaggccag tactataatg
    10381 ttagaattga agatttcagt gcaaaaaaac gtacaaagtc aattgcatat ccgcgtcaaa
    10441 tagctatgta cttgtctaga gagcttacag atttctcatt acctaaaatt ggtgaagaat
    10501 ttggtgggcg tgatcatacg accgtcattc atgctcatga aaaaatatct aaagatttaa
    10561 aagaagatcc tatttttaaa caagaagtag agaatcttga aaaagaaata agaaatgtat
    10621 aagtaggaaa ctttgggaaa tgtaatctgt tatataacag cactaatgat aacaatcatt
    10681 ttttacattt ctatatgcta atgtggcaag atgagcaaaa ctcattttgt ggataatgtt
    10741 taaaagtcat acacaccata cacaagttat caacatgtgt ataacttcgc caaatctatg
    10801 tttttaagac ttatccacca atccacagca cctactacta ttactaagaa cttaaaacct
    10861 atataattat atataaacga ctggaaggag ttttaattaa tgatggaatt cactattaaa
    10921 agagattatt ttattacaca attaaatgac acattaaaag ctatttcacc aagaacaaca
    10981 ttacctatat taactggtat caaaatcgat gcgaaagaac atgaagttat attaactggt
    11041 tcagactctg aaatttcaat agaaatcact attcctaaaa ctgtagatgg cgaagatatt
    11101 gtcaatattt cagaaacagg ctcagtagta cttcctggac gattctttgt tgatattata
    11161 aaaaaattac ctggtaaaga tgttaaatta tctacaaatg aacaattcca gacattaatt
    11221 acatcaggtc attctgaatt taatttaagt ggtttagatc cagatcaata tcctttatta
    11281 cctcaagttt ctagagatga cgcaattcaa ttgtcggtaa aagtgcttaa aaacgtgatt
    11341 gcacaaacaa attttgcagt gtccacctca gaaacacgcc cagtactaac tggtgtgaac
    11401 tggcttatac aagaaaatga attaatatgc acagcgactg actcacaccg cttggctgta
    11461 agaaagttgc agttagaaga tgtttctgaa aacaaaaatg tcatcattcc aggtaaggct
    11521 ttagctgaat taaataaaat tatgtctgac aatgaagaag acattgatat cttctttgct
    11581 tcaaaccaag ttttatttaa agttggaaat gtgaacttta tttctcgatt attagaagga
    11641 cattatcctg atacaacacg tttattccct gaaaactatg aaattaaatt aagtatagac
    11701 aatggggagt tttatcatgc gattgatcgt gcctctttat tagcgcgtga aggtggtaat
    11761 aacgttatta aattaagtac aggtgatgac gttgttgaat tgtcttctac atcaccagaa
    11821 attggtactg taaaagaaga agttgatgca aacgatgttg aaggtggtag cctgaaaatt
    11881 tcattcaact ctaaatatat gatggatgct ttaaaagcaa tcgataatga tgaggttgaa
    11941 gttgaattct tcggtacaat gaaaccattt attctaaaac caaaaggtga cgactcggta
    12001 acgcaattaa ttttaccaat cagaacttac taaaaataaa tataaataaa ggatgacgtg
    12061 attaattaaa acgtcatcct ttattttttg gcaaaaataa ttctaggtgc gtatgtaaaa
    12121 taaatttggc agcattttaa acagcaaata aaagacgcca attaaattta tgacaaatgt
    12181 atccaaaatt taataagtgt gcttatatgc cctttaaatt taaaatttta atagtcaata
    12241 acaagttgaa tataaaagtt aaacgccgtt aaatagcgtt aaaaaattga aaatgacagt
    12301 attgccaaaa aataagaatt aattatttat atgtaaacgg tttctacctc tattttaaat
    12361 gaaatttgtg acaaaaaaag gtataatata ttaatgacat acaaagaaat ggagtgatta
    12421 ttttggttca agaagttgta gtagaaggag acattaattt aggtcaattt ctaaaaacag
    12481 aagggattat tgaatctggt ggtcaagcaa aatggttctt gcaagacgtt gaagtattaa
    12541 ttaatggagt gcgtgaaaca cgtcgcggta aaaagttaga acatcaagat cgtatagata
    12601 tcccagaatt acctgaagat gctggttctt tcttaatcat tcatcaaggt gaacaatgaa
    12661 gttaaataca ctccaattag aaaattatcg taactatgat gaggttacgt tgaaatgtca
    12721 tcctgacgtg aatatcctca ttggagaaaa tgcacaagga aagacaaatt tacttgaatc
    12781 aatttatacc ttagctttag caaaaagtca tagaacgagt aatgataagg aactcatacg
    12841 ttttaatgct gattatgcta aaatagaagg tgagcttagt tatagacacg gcacgatgcc
    12901 attaacaatg tttataacta aaaaaggtaa acaagtcaaa gtgaatcact tagagcaaag
    12961 tcgtctaact caatatattg gacacctcaa tgtggttcta tttgcgccag aagatttgaa
    13021 tattgtaaaa ggctctcctc aaataagacg acgctttata gatatggagt tgggccaaat
    13081 ttctgctgtt tacttaaatg atttagctca ataccaacgt attttaaagc aaaagaataa
    13141 ttacttaaag cagttacaat taggccaaaa aaaggactta acaatgttgg aagtattaaa
    13201 tcagcagttt gctgaatatg caatgaaagt aactgataaa cgtgcacatt ttattcaaga
    13261 gctagagtcg ttagctaaac cgattcatgc tggtatcaca aatgataaag aagcgttgtc
    13321 gctgaattat ttacctagtc ttaaatttga ttatgctcaa aatgaagcgg cacgacttga
    13381 agaaattatg tctattctta gcgataatat gcaaagagaa aaagaacgag gcattagctt
    13441 attcggacca catcgagatg atataagttt tgatgtgaat ggcatggatg ctcaaacata
    13501 tggttctcaa ggacagcaac gtacaacggc tttgtccatt aaattagctg aaattgagtt
    13561 aatgaatatc gaagttgggg aatatcccat cttattatta gacgatgtac tcagtgaatt
    13621 agatgattcg cgtcaaacgc atttattaag tacgattcag cataaagtac aaacatttgt
    13681 cactacgaca tctgtagatg gtattgatca tgaaatcatg aataacgcta aattgtatcg
    13741 tattaatcaa ggtgaaatta taaagtaaca gaaagcgatg gtgactgcat tgtcagatgt
    13801 aaacaacacg gataattatg gtgctgggca aatacaagta ttagaaggtt tagaagcagt
    13861 acgtaaaaga ccaggtatgt atataggatc gacttcagag agaggtttgc accatttagt
    13921 gtgggaaatt gtcgataata gtatcgatga agcattagct ggttatgcaa atcaaattga
    13981 agttgttatt gaaaaagata actggattaa agtaacggat aacggacgtg gtatcccagt
    14041 tgatattcaa gaaaaaatgg gacgtccagc tgtcgaagtt attttaactg ttttacatgc
    14101 tggtggtaaa tttggcggtg gcggatacaa agtatctggt ggtttacatg gtgttggttc
    14161 atcagttgta aacgcattgt cacaagactt agaagtatat gtacacagaa atgagactat
    14221 atatcatcaa gcatataaaa aaggtgtacc tcaatttgac ttaaaagaag ttggcacaac
    14281 tgataagaca ggtactgtca ttcgttttaa agcagatgga gaaatcttca cagagacaac
    14341 tgtatacaac tatgaaacat tacagcagcg tattagagag cttgctttct taaacaaagg
    14401 aattcaaatc acattaagag atgaacgtga tgaagaaaac gttagagaag actcctatca
    14461 ctatgagggc ggtattaaat cgtacgttga gttattgaac gaaaataaag aacctattca
    14521 tgatgagcca atttatattc atcaatctaa agatgatatt gaagtagaaa ttgcgattca
    14581 atataactca ggatatgcca caaatctttt aacttacgca aataacattc atacgtatga
    14641 aggtggtacg catgaagacg gattcaaacg tgcattaacg cgtgtcttaa atagttatgg
    14701 tttaagtagc aagattatga aagaagaaaa agatagactt tctggtgaag atacacgtga
    14761 aggtatgaca gcaattatat ctatcaaaca tgatgatcct caattcgaag gtcaaacgaa
    14821 gacaaaatta ggtaattctg aagtgcgtca agttgtagat aaattattct cagagcactt
    14881 tgaacgattt ttatatgaaa atccacaagt cgcacgtaca gtggttgaaa aaggtattat
    14941 ggcggcacgt gcacgtgttg ctgcgaaaaa agcgcgtgaa gtaacacgtc gtaaatcagc
    15001 gttagatgta gcaagccttc caggtaaatt agccgattgc tctagtaaaa gtcctgaaga
    15061 atgtgagatt ttcttagtcg aaggggactc tgccgggggg tctacaaaat ctggtcgtga
    15121 ctctagaacg caggcgattt taccattacg aggtaagata ttaaatgttg aaaaagcacg
    15181 attagataga attttgaata acaatgaaat tcgtcaaatg atcacagcat ttggtacagg
    15241 aatcggtggc gactttgatc tagcgaaagc aagatatcac aaaatcgtca ttatgactga
    15301 tgccgatgtg gatggagcgc atattagaac attgttatta acattcttct atcgatttat
    15361 gagaccgtta attgaagcag gctatgtgta tattgcacag ccaccgttgt ataaactgac
    15421 acaaggtaaa caaaagtatt atgtatacaa tgatagggaa cttgataaac ttaaatctga
    15481 attgaatcca acaccaaaat ggtctattgc acgatacaaa ggtcttggag aaatgaatgc
    15541 agatcaatta tgggaaacaa caatgaaccc tgagcaccgc gctcttttac aagtaaaact
    15601 tgaagatgcg attgaagcgg accaaacatt tgaaatgtta atgggtgacg ttgtagaaaa
    15661 ccgtagacaa tttatagaag ataatgcagt ttatgcaaac ttagacttct aagcgctgtg
    15721 aactgaactt ttgaaggagg aactcttgat ggctgaatta cctcaatcaa gaataaatga
    15781 acgaaatatt accagtgaaa tgcgtgaatc atttttagat tatgcgatga gtgttatcgt
    15841 tgctcgtgca ttgccagatg ttcgtgacgg tttaaaacca gtacatcgtc gtatactata
    15901 tggattaaat gaacaaggta tgacaccgga taaatcatat aaaaaatcag cacgtatcgt
    15961 tggtgacgta atgggtaaat atcaccctca tggtgactca tctatttatg aagcaatggt
    16021 acgtatggct caagatttca gttatcgtta tccgcttgtt gatggccaag gtaactttgg
    16081 ttcaatggat ggagatggcg cagcagcaat gcgttatact gaagcgcgta tgactaaaat
    16141 cacacttgaa ctgttacgtg atattaataa agatacaata gattttatcg ataactatga
    16201 tggtaatgaa agagagccgt cagtcttacc tgctcgattc cctaacttat tagccaatgg
    16261 tgcatcaggt atcgcggtag gtatggcaac gaatattcca ccacataact taacagaatt
    16321 aatcaatggt gtacttagct taagtaagaa ccctgatatt tcaattgctg agttaatgga
    16381 ggatattgaa ggtcctgatt tcccaactgc tggacttatt ttaggtaaga gtggtattag
    16441 acgtgcatat gaaacaggtc gtggttcaat tcaaatgcgt tctcgtgcag ttattgaaga
    16501 acgtggaggc ggacgtcaac gtattgttgt cactgaaatt cctttccaag tgaataaggc
    16561 tcgtatgatt gaaaaaattg cagagctcgt tcgtgacaag aaaattgacg gtatcactga
    16621 tttacgtgat gaaacaagtt tacgtactgg tgtgcgtgtc gttattgatg tgcgtaagga
    16681 tgcaaatgct agtgtcattt taaataactt atacaaacaa acacctcttc aaacatcatt
    16741 tggtgtgaat atgattgcac ttgtaaatgg tagaccgaag cttattaatt taaaagaagc
    16801 gttggtacat tatttagagc atcaaaagac agttgttaga agacgtacgc aatacaactt
    16861 acgtaaagct aaagatcgtg cccacatttt agaaggatta cgtatcgcac ttgaccatat
    16921 cgatgaaatt atttcaacga ttcgtgagtc agatacagat aaagttgcaa tggaaagctt
    16981 gcaacaacgc ttcaaacttt ctgaaaaaca agctcaagct attttagaca tgcgtttaag
    17041 acgtctaaca ggtttagaga gagacaaaat tgaagctgaa tataatgagt tattaaatta
    17101 tattagtgaa ttagaagcaa tcttagctga tgaagaagtg ttattacagt tagttagaga
    17161 tgaattgact gaaattagag atcgtttcgg tgatgatcgt cgtacagaaa ttcaattagg
    17221 tggatttgaa gacttagagg acgaagactt aattccagaa gaacaaatag taattacact
    17281 aagccataat aactacatta aacgtttgcc ggtatctaca tatcgtgctc aaaaccgtgg
    17341 tggtcgtggt gttcaaggta tgaatacatt ggaagaagat tttgtcagtc aattggtaac
    17401 tttaagtaca catgaccatg tattgttctt tactaacaaa ggtcgtgtat acaaacttaa
    17461 aggttacgaa gtgcctgagt tatcaagaca gtctaaaggt attcctgtag tgaatgctat
    17521 tgaacttgaa aatgatgaag tcattagtac aatgattgct gttaaagacc ttgaaagtga
    17581 agacaacttc ttagtgtttg caactaaacg tggtgtcgtt aaacgttcag cattaagtaa
    17641 cttctcaaga ataaatagaa atggtaagat tgcgatttcg ttcagagaag atgatgagtt
    17701 aattgcagtt cgcttaacaa gtggtcaaga agatatcttg attggtacat cacatgcatc
    17761 attaattcga ttccctgaat caacattacg tcctttaggc cgtacagcaa cgggtgtgaa
    17821 aggtattaca cttcgtgaag gtgacgaagt tgtagggctt gatgtagctc atgcaaacag
    17881 tgttgatgaa gtattagtag ttactgaaaa tggttatggt aaacgtacgc cagttaatga
    17941 ctatcgctta tcaaatcgtg gtggtaaagg tattaaaaca gctacgatta ctgagcgtaa
    18001 tggtaatgtt gtatgtatca ctacagtaac tggtgaagaa gatttaatga ttgttactaa
    18061 tgcaggtgtc attattcgac tagatgttgc agatatttct caaaatggtc gtgcagcaca
    18121 aggtgttcgc ttaattcgct taggtgatga tcaatttgtt tcaacggttg ctaaagtaaa
    18181 agaagatgca gaagatgaaa cgaatgaaga tgagcaatct acttcaactg tatctgaaga
    18241 tggtactgaa caacaacgtg aagcggttgt aaatgatgaa acaccaggaa atgcaattca
    18301 tactgaagtg attgattcag aagaaaatga tgaagatgga cgtattgaag taagacaaga
    18361 tttcatggat cgtgttgaag aagatataca acaatcatca gatgaagaat aataaaaaat
    18421 aagacttccc tatatgtagg ggagtcttat ttttatgcta gaaagtaatg ctttactata
    18481 ttcaatgatt agtaatgact aactttctaa ttgtttcatt gcgtaaggta tttcattgat
    18541 aagtcttgat ggtggcacca catacatatc ttttgcaagg ttttcgccaa taaaactatg
    18601 tgtatatgtg gcactcataa ccgcttcttt taagttatca aattgaccga caaagcttgt
    18661 aatcatacca gcaagtgtat cgcccatacc accagtcgcc attgctgggc taccgattgt
    18721 caatttaaag tcttcatctt taaagaaaat ttcagtacca tgttttttaa gtacaacagt
    18781 tgcacctaaa cgatcaactg cttcacgatt acgctcatat gtctgttcct caataggaat
    18841 accacttaat cgttcccatt ctttgaggtg tggtgtaaag atcacacgac atgtaggtaa
    18901 ttgcggtttc agtttactaa agattgtaat cgcatcgccg tctacgatta aattttgatg
    18961 cggttgtata ttttgtagta ggaatgtaat ggcattattt cctttgaaat caacgccaag
    19021 acctggacca attagtatac tgtcagtcat ttcaatcatt ttcgtcaaca ttttcgtatc
    19081 attaatatca ataaccatcg cttctgggca acgagaatgt aatgctgaat gatttgttgg
    19141 atgtgtagct acagtgatta aaccactacc gctaaataca catgcacgag ccgctaacat
    19201 aatggcacca cctaagttag cagatccacc aattaataaa attttgccat aatcaccttt
    19261 atgtgaatct tctttacgct taggaatgtt aatagaattt aacgtttcca tagtgatata
    19321 acctcccatg taaaagcctt ttccgaattt attcaatttt aaaaatatat agtaactttt
    19381 aacaaaatgt attataaatt tctgaattca ttattatttg tcgttaaata caatagaaaa
    19441 tactatacct gtatatgcaa ttcgtcaata gataaattat taaatatgct tacaacaatc
    19501 ttaatatcct ttaacgcact acaatagtgc tctgataata ggttataaat gtacgtaaaa
    19561 ccattgtttc aataaaaatg aaaacgtata cttcaagaag gatgggttac ttaatataaa
    19621 caagggggta acatatatga ctttatattt agatggtgaa acactaacaa ttgaggatat
    19681 taaatcattt ttacaacaac aatcaaagat tgaaattatt gatgatgcgt tagaacgtgt
    19741 caaaaaaagt agagcggtag ttgaacgtat tattgaaaat gaggaaacgg tttacggtat
    19801 tactacaggt tttgggttat ttagtgatgt acgtatagac ccgacgcaat ataatgaatt
    19861 acaagtgaat ctgatacgct cacatgcctg tggactaggt gagccatttt caaaagaagt
    19921 agcattagtc atgatgattt tacgattgaa tacattatta aaaggtcatt caggtgccac
    19981 tttagaatta gtgagacaat tacaattttt tataaatgaa cgtattatac cgataatccc
    20041 acagcaaggc tctctcggtg catcaggaga tttagcgcca ttatcacatt tagcattagc
    20101 attaattggt gaagggaaag tattgtacag aggggaagaa aaggatagtg acgatgtatt
    20161 aagagaatta aatagacaac ctttgaacct tcaggctaaa gaaggtttag cattgattaa
    20221 tggtacgcaa gctatgacag ctcaaggtgt cattagttat atagaagcag aagatttagg
    20281 ttaccaatct gaatggattg ctgcattaac gcatcagtct cttaatggca ttatagatgc
    20341 atatcgacat gatgtgcacg cagttcgtaa ttttcaagaa cagattaatg tggcagcgcg
    20401 tatgcgtgat tggttagaag gatcaacatt aacgacgcga caatcagaaa tacgtgtaca
    20461 agatgcatat acgttgcgtt gtataccaca aatccatggc gcgagttttc aagtattcaa
    20521 ttatgttaaa cagcaattag aatttgaaat gaatgcggct aatgataatc cacttatatt
    20581 tgaggaagca aatgaaacgt ttgttatttc aggtggtaac ttccatggac aacctattgc
    20641 ttttgcatta gatcatctta aattaggtgt aagtgaatta gcaaacgtat cggaacgtcg
    20701 tctagagcga ctagtaaatc ctcaattaaa tggtgattta ccagcatttc ttagtccaga
    20761 gccaggattg caaagtggcg cgatgattat gcaatatgct gctgcaagtc tcgtttctga
    20821 aaataaaact ttagcgcatc cagcgagtgt tgattctatc acttcatctg cgaaccaaga
    20881 agatcacgta tctatgggaa ctacagctgc tagacatggt tatcaaatta ttgaaaatgc
    20941 aagacgtgtg ctggcaatcg aatgtgttat tgcattacaa gcagcagagt taaaaggtgt
    21001 tgaaggatta tcaccaaaaa cacgtcgcaa gtatgatgag tttcgaagta tcgtgccatc
    21061 cattacacat gatcgtcaat ttcataaaga tattgaagcg gttgcacagt atttaaagca
    21121 atcaatttat caaacgactg catgtcacta aatcgacatg agtgatgttt gaaatcgtta
    21181 cttgaaaaag caaatatagt ttgctatatt aaaaataact taataagaca ttgttcgtag
    21241 gacaagtaat atatagtgtt cgatatcaga gagcttgtgg ttagtgtgaa caagaatcaa
    21301 catatatatg aatctaccta cttaatttaa aagaacaatc ggtgataacc gttattttag
    21361 tgaagtgcaa tttaggttta gtgtatcttt ataacttaaa ttgttaaata gggtggcaac
    21421 gcgtagacca cgtcccttgt agggatgtgg tcttttttta ttttctaaaa aataaagacg
    21481 tacgtcattc cataataaat gataattatt tgggaaagga tgaaggttaa tgttagacat
    21541 tagattattc agaaatgagc ctgacacagt taagagcaaa attgaattac gtggagatga
    21601 tccaaaagtt gtagatgaaa ttttagaatt ggatgagcaa cgacgtaaat taattagtgc
    21661 aacagaagaa atgaaagcac gtcgtaataa agtaagcgaa gaaatcgcat taaaaaaacg
    21721 taataaagaa aatgctgatg atgtgattgc tgaaatgcgc acattaggtg acgatattaa
    21781 agaaaaagat agtcaattaa atgaaattga taataaaatg acaggtatcc tttgtcgtat
    21841 tccaaattta ataagtgatg atgtacctca aggtgaatct gatgaagata acgttgaagt
    21901 taaaaagtgg ggtacaccac gtgagttttc atttgaaccc aaagcacatt gggatattgt
    21961 agaagaattg aaaatggctg attttgatcg tgcagcaaaa gtttcaggtg cgcgttttgt
    22021 atatttaaca aatgaaggtg cgcaattaga gcgtgcttta atgaactata tgattacaaa
    22081 acatacaaca caacatggtt atacagaaat gatggtacca cagcttgtga acgcagatac
    22141 aatgtatggt acaggtcaat tacctaaatt tgaagaagat ttatttaaag tagaaaaaga
    22201 aggattatat acaattccaa ctgctgaagt accattaacg aatttctacc gtaatgaaat
    22261 tattcaacca ggtgtacttc ctgaaaaatt cactggtcaa tctgcatgtt tccgtagtga
    22321 agcaggatca gcaggtagag atacaagagg attaattcgt ttacatcaat tcgataaagt
    22381 ggaaatggta cgttttgaac aacctgaaga ttcatggaat gctttagaag aaatgacaac
    22441 aaacgcagaa gcaattctag aagagttagg tttaccatac cgtcgtgtta ttttatgtac
    22501 aggtgatatt ggatttagtg caagcaaaac atatgattta gaagtttggt taccaagcta
    22561 caatgattat aaagaaatta gttcatgctc aaactgtacg gatttccaag cgcgtcgtgc
    22621 taacatccgc ttcaagcgtg acaaagcagc taaaccagaa ttagcacata cattaaatgg
    22681 tagtggttta gcagttggac gtacatttgc tgctattgtt gaaaattacc aaaatgaaga
    22741 tggaacagta acaattccag aagcattagt accatttatg ggtggtaaaa cacaaatttc
    22801 aaaaccagtt aaataaaggc tttagctaca agctttaaaa agtatatatc tacgtatact
    22861 taaagcaagg gcaagatact ttaaataata ttttaaaaag tggtgacgaa gctgtcgcca
    22921 ctttttttgt gctgtaaaag tataatagtg agccaatgca cataacaaca ataaattaag
    22981 tttgtggttt aatggggtga acgcatttca ttatagcaac aatacgggat aattatgatg
    23041 aactaaaaca atctaaaacg taacaagttt gagcatcact aatataggaa aggaagcgat
    23101 aaaatactga tttcgttgat atgtagtatg agttatatcg atggagtagg gtagggggag
    23161 gggatgatta taagggagtg gtacatgaat caatatccca gactcatcat cagatataaa
    23221 aatttataaa attgatactt aaaaacaact acaaatccat agaaaatatg gaggtagtct
    23281 taaataaaaa attgaaaatt ctcaaaaata aaaagttaat atgaagctga ctaaagactc
    23341 cggtatgtct aacctcagac aaactgatgt ctaatgttat tgcttagggt atagaactgt
    23401 attagactag gtatattatt ttttcgtaat tatataaata taaagtggca aaggaggtaa
    23461 ttgagatgac aacacattta agttttagac aaggcgtgca agagtgtatc ccaacattat
    23521 tgggttatgc cggtgttggt atttcatttg gtattgtggc ttcgtctcaa aactttagta
    23581 ttttagaaat tgtcttgtta tgtcttgtta tatatgccgg tgctgcgcaa tttattatgt
    23641 gcgcgttgtt tatagcaggt acacctatat cagcgattgt actaactgta tttatcgtaa
    23701 attcaagaat gttcctttta agtatgtcgc ttgcaccaaa cttcaagaca tatgggtttt
    23761 ggaaccgtgt tggattaggt tcattagtaa ctgacgaaac gtttggcgtc gccattacac
    23821 cttatttaaa aggagaagct atcaatgatc gttggatgca tggtcttaac atcacagcat
    23881 atttattttg ggcaatttca tgtgtagctg gggctttatt tggcgaatat atctcaaatc
    23941 cgcaaacgct agggttagat tttgctatca cggctatgtt tatctttttg gccattgcgc
    24001 aatttgaatc aattactaaa tcgcgattaa gaatttacat agtactcatt attgccgtca
    24061 tagtaatgat gttatcgcta agtatgttta tgccttcata tctagcaata ttaattgcag
    24121 ccacaatttc agcagcgtta ggagtgatga tggaacaatg ataactcata tgaacatgtt
    24181 aatacttatt ttattgtgtg gtatcgtaac gctattaatt cgaattatac cttttatcat
    24241 gatttcaaaa gtgcaattgc ctgatgtcgt ggttcgatgg ctatcattta tcccaatcac
    24301 actatttacg gcacttgtca ttgacagcat tattcaacag acgcctcatg gtgaggggta
    24361 tacattaaac atcccttaca ttatcgcgct cattccgacg gttattttat ctataatcac
    24421 gcgtagttta actattacaa ttattagtgg gattgttatc atggcagcat tacgattttt
    24481 cttttaaaaa taactgaaaa tcattgaaca gatatttaaa cttaggtaaa ctgttagtaa
    24541 tcagaaaatt ctgatataca aatcgtctat gttaagattg ggaatcgtgt atacgtaagc
    24601 gatttggcta acgcatgaca atgataacaa cattttaaat gataaaagta attcatcact
    24661 gaatctcaac taacacataa caatttcata tttcttattg tgagaagttg agggacttgg
    24721 ccctgtgata cttcagcaac cgactttata gcacggtgct aaaaccaacg agttactcga
    24781 atgataagta taaagacttc ttacttttca atagggtgag aagttttttt gtttaaggag
    24841 gaaagaacaa tgacaaatta cacagtagat actttaaatt taggggaatt tattacagaa
    24901 tctggggaag tcatagataa cttgcgtttg agatatgagc atgtcggtta tcatggacaa
    24961 ccattagttg tagtttgtca tgcattaact ggcaatcatt taacatatgg aacagatgat
    25021 tatccgggtt ggtggcgaga aattattgat gggggatata tacccattca cgattatcaa
    25081 tttttaacat ttgatgttat tggtagtcct ttcggttcaa gttcaccttt aaacgaccct
    25141 cattttccta aaaaattaac attaagagat atagtcagag cgaatgaacg aggtatacaa
    25201 gcccttggtt atgataagat taatatttta atagggggaa gtcttggagg tatgcaagca
    25261 atggaactac tctacaatca acagtttgaa gtagataaag ccattatcct tgctgcaaca
    25321 agtcgaacat catcttatag tagagctttc aatgaaattg caaggcaagc cattcatctt
    25381 ggtggtaagg aaggtctaag tattgcacgc caattaggtt ttttgacata tcgatcatca
    25441 aaaagttatg atgaacgttt cacgccggat gaagtagtcg cataccaaca acatcaaggt
    25501 aataaattta aagaacattt tgatttgaat tgttatctga cactgctaga tgtattggat
    25561 agtcacaaca ttgaccgagg tcgcacagac gtaacgcatg tttttaaaaa tttagaaaca
    25621 aaagtgttaa cgatggggtt catagatgat ttgctatatc cggatgatca agttcgtgca
    25681 ttaggtgaac gttttaaata tcatcgtcat ttcttcgtgc ctgataatgt tgggcatgat
    25741 ggattcctac taaactttag tacctgggca cctaacttat atcatttctt aaatttaaag
    25801 cattttaagc gtaagtaata atatatattt tcaaagaatg aagccactaa atcacagtta
    25861 tcatattcaa aaacatctag agtacatgag agtggaaatg tattgtaaat ctaaatcaag
    25921 cttgattgct atgtagtggg attaaataat catgttgaaa atgaaagcac acaaaagcga
    25981 ttcaaatgag tatgttaatt acttataaaa catgaaagtt attattcaat taaatgaaat
    26041 agaagcatac aatctataaa ttgttaattt tcattaaaga ggttaaaata atagctatag
    26101 ttaaaaatat gggagtggct tatgtgtttt caaaaataca acctaaagca acaataattg
    26161 caacgattgc gttggtattt gtcgctttag ctttatatct agtgcctggt ttaggactaa
    26221 tatttgcatt atttgcaacc ataccaggta tcgttttatg gaataaatca atacaatctt
    26281 tcgggattag tgcacttatt acagtaatta taacaactgt tttaggtaat actttcgttt
    26341 taagtgccat catattagtc ttaattgcaa gtttaattat tggtcaattg ctcaaagaaa
    26401 gaacgtctaa agaaagaata ttatacgtaa caacagtagc gatgagctta atttcattaa
    26461 tcgcttttat gttactacaa acattcggaa ggattccacc atcagcgagc atagtaaaac
    26521 ctttcaagca aacattacat gaagcgatta cgatgagcgg tgccgatgcg aatatgaccc
    26581 aaatattaga agaagggttt agacaagcga ccgttcaatt accaggtttc atcattatca
    26641 ttacattttt aatcgtctta attaacttaa tcgttacatt tccgatttta cgaaaattta
    26701 aaatcgctac acctgtattt aagccacttt tcgcgtggca aatgagcggt attttattat
    26761 ggatatacat tattgttatc atatgtttat tatttacagg tcaaccgagt gtgttccaga
    26821 gcattctttt aaacttccaa cttgtgttat cattagtaat gtatattcaa ggtttaagtg
    26881 ttattcattt ctttggtaaa gcgaaaggtt tgccgaatgc agtaacgatt ttactattgg
    26941 ttatcggtac aatactgaca cctacgacac atattgtagg actacttggt gttatcgatt
    27001 taagtttgaa tttgaagcga atcatgaaaa ataattctaa aaagtgaata gaggtggaat
    27061 aatgaatcgg cagtccacta agaaagcttt actaatacca tttgtcatca tgatcatcac
    27121 agcaattgtt ttaatgggtg tatggtttat ctttaatagt cttatagcac taattgcatc
    27181 tatcgttctt gtcgtgatga ttattgttag catcatttta ttcagacaag ctttaatgaa
    27241 aatggatagt tatgtagatg gtttgagtgc tcaaatttca acaacaaata ataaagcaat
    27301 caaacattta ccaattggta tcattgtttt agatgaaaat gatcacatcg aatgggttaa
    27361 ccaatttatg acagatcata tggaagcgaa tgtcatttct gaatctgtaa atgaagtatt
    27421 tccaaacatt ttaaagcaat tagatagagt gaaatccgtt gaaatagaat ataatcagta
    27481 tcatttccaa gtacgttatt ctgagaatga tcactgcctc tatttctttg atataactga
    27541 acaagtacaa acaaatgaac tatatgaaaa ttctaaacca atcattgcga cattattttt
    27601 agataactac gatgagatta cgcaaaatat gaatgatacg cagcgttcgg aaatcaactc
    27661 aatggtaacg cgtgtcatta gtcgatgggc aactgagtat aatatatttt tcaaaagata
    27721 cagttccgat caattcgtag cctatttaaa tcaaaaaata ttagctgact tagaagaatc
    27781 taaatttgat atcttgagtc aattacgtga aaaaagtgtt ggttatcgtg cccaattaac
    27841 attaagtatc ggtgttggtg aaggtactga aaatttaatc gacttaggtg aattatcaca
    27901 atcaggccta gacttagcat taggacgcgg tggcgaccaa gttgcaatta aaagtattaa
    27961 tggtaatgtg cgtttctatg gcggtaagac tgacccgatg gagaaacgta ctcgtgtaag
    28021 agcacgtgtg atctcacatg cgttaaaaga tatccttgca gagggtgaca aagtcattat
    28081 catgggacat aaacgtcctg acttagatgc aattggtgca gcaatcggtg tgtctagatt
    28141 tgcaatgatg aataatttag aagcatacat cgtattaaat gagactgaca ttgatccaac
    28201 attacgacgc gtgatgaacg aaatagataa aaagccagag ttaagagagc gatttattac
    28261 atcagatgat gcttgggata tgatgacatc taagacaacc gtagtgattg ttgatacgca
    28321 taaaccggaa ctggttttag atgaaaatgt cttaaataaa gcaaaccgta aagttgttat
    28381 cgatcatcat agacgtggtg aaagcttcat ctctaatcca ttgttgatat atatggaacc
    28441 atacgcaagt tcgacagctg aattggtaac agagttactg gaatatcaac caacagaaca
    28501 acgtttaaca cgtcttgaat caacagtgat gtatgcaggt attattgtag atacaagaaa
    28561 ctttacatta cgaacaggat caagaacatt cgatgcagcg agttatttac gtgcacatgg
    28621 tgcagatacg attttaacgc aacatttctt aaaagatgat gtggatactt acattaatcg
    28681 atctgaatta attcgaactg taaaagttga agataatggc atagccattg cgcatggttc
    28741 agacgataaa atttatcatc cagtaacagt tgcacaagca gcagatgaac tgttaagttt
    28801 agaaggtatt gaagcatcat atgttgttgc gagacgtgaa gataatctga ttggtatatc
    28861 tgcgcgttca ctcggttcag taaatgtcca gttaacaatg gaagcacttg gtggcggtgg
    28921 acatttaacc aatgcggcaa cacaacttaa aggtgtgaca gtcgaagagg cgatagcaca
    28981 attacaacaa gcaattacag aacaattaag taggagtgaa gatgcatgaa agtaattttt
    29041 acacaagatg ttaaaggtaa aggtaaaaaa ggtgaagtta aagaagtacc agtaggttat
    29101 gcaaataact tcttattgaa aaagaattat gctgtagaag caacaccagg taaccttaaa
    29161 caattagagt tacagaaaaa acgtgcaaaa caagaacgcc aacaagaaat tgaagatgct
    29221 aaagcattaa aagaaacgtt atcaaacatt gaagttgaag tatcagcaaa aactggtgaa
    29281 ggtggtaaat tgtttgggtc agtaagtaca aaacaaattg ccgaagcact aaaagcacaa
    29341 catgatatta aaattgataa acgtaaaatg gatttaccaa atggaattca ttccctagga
    29401 tatacgaatg tacctgttaa attagataaa gaagttgaag gtacaattcg cgtacacaca
    29461 gttgaacaat aaagttggat tgaaataaga ggtgtaacca ttcatggata gaatgtatga
    29521 gcaaaatcaa atgccgcata acaatgaagc tgaacagtct gtcttaggtt caattattat
    29581 agatccagaa ttgattaata ctactcagga agttttgctt cctgagtcgt tttatagggg
    29641 tgcccatcaa catattttcc gtgcaatgat gcacttaaat gaagataata aagaaattga
    29701 tgttgtaaca ttgatggatc aattatcgac ggaaggtacg ttgaatgaag cgggtggccc
    29761 gcaatatctt gcagagttat ctacaaatgt accaacgacg cgaaatgttc agtattatac
    29821 tgatatcgtt tctaagcatg cattaaaacg tagattgatt caaactgcag atagtattgc
    29881 caatgatgga tataatgatg aacttgaact agatgcgatt ttaagtgatg cagaacgtcg
    29941 aattttagag ctatcatctt ctcgtgaaag cgatggcttt aaagacattc gagacgtctt
    30001 aggacaagtg tatgaaacag ctgaagagct tgatcaaaat agtggtcaaa caccaggtat
    30061 acctacagga tatcgagatt tagaccaaat gacagcaggg ttcaaccgaa atgatttaat
    30121 tatccttgca gcgcgtccat ctgtaggtaa gactgcgttc gcacttaata ttgcacaaaa
    30181 agttgcaacg catgaagata tgtatacagt tggtattttc tcgctagaga tgggtgctga
    30241 tcagttagcc acacgtatga tttgtagttc tggaaatgtt gactcaaacc gcttaagaac
    30301 gggtactatg actgaggaag attggagtcg ttttactata gcggtaggta aattatcacg
    30361 tacgaagatt tttattgatg atacaccggg tattcgaatt aatgatttac gttctaaatg
    30421 tcgtcgatta aagcaagaac atggcttaga catgattgtg attgactact tacagttgat
    30481 tcaaggtagt ggttcacgtg cgtccgataa cagacaacag gaagtttctg aaatctctcg
    30541 tacattaaaa gcattagccc gtgaattaga atgtccagtt atcgcattaa gtcagttatc
    30601 tcgtggtgtt gaacaacgac aagataaacg tccaatgatg agtgatattc gtgaatctgg
    30661 ttcgattgag caagatgccg atatcgttgc attcttatac cgtgatgatt actataaccg
    30721 tggcggcgat gaagatgatg acgatgatgg tggtttcgag ccacaaacga atgatgaaaa
    30781 cggtgaaatt gaaattatca ttgctaagca acgtaacggt ccaacaggca cagttaagtt
    30841 acattttatg aaacaatata ataaatttac cgatatcgat tatgcacatg cagatatgat
    30901 gtaaaaaagt ttttccgtac aataatcatt aagatgataa aattgtacgg tttttatttt
    30961 gttctgaacg ggttgatata tgttaagttt gtgtattgaa agtgataaat tagtactgtc
    31021 aacgcctctg ttaaagggtt tttaggacgt tgaaaacgat ttgttaaaat gatttttctt
    31081 ttaaaaaggc cgaaaatcaa tgttcgattt ttatttgcat tatggtctcg atattggtag
    31141 aatatcaaat ggttaaatga gaaaaacttg gaggtgctca catgtcatca atcgtagtag
    31201 ttgggacaca atggggagac gaaggaaaag gaaaaataac ggatttcttg gcagaacagt
    31261 cagatgttat cgcgcgtttt tcaggtggta ataatgcagg ccataccatt caatttggcg
    31321 gagaaacata taaattacat ttagtaccat ctggtatctt ttacaaagac aaattagcgg
    31381 taatcggtaa cggagtcgtt gttgatccag ttgcactatt gaaagaatta gacggattaa
    31441 atgaacgtgg cattcctaca agtaatttac gtatatctaa tcgtgcgcaa gtgattttac
    31501 catatcactt agcacaagat gaatatgaag aacgtttacg tggtgacaat aagattggta
    31561 caactaaaaa aggtatcggt ccagcatatg tagacaaagt tcaacgtatc ggtattcgta
    31621 tggcagattt acttgaaaaa gaaacattcg aaagattatt aaaatcaaac attgaatata
    31681 aacaagcata tttcaaaggt atgtttaacg aaacatgtcc atcatttgat gatatctttg
    31741 aagaatatta tgcagcaggt caacgtctaa aagaatttgt aacagacaca tcaaaaatct
    31801 tagacgatgc atttgtagca gatgaaaagg tacttttcga aggtgcgcaa ggtgtaatgt
    31861 tagatatcga ccatggtaca tatccattcg ttacatcaag taatccaatt gcaggtaacg
    31921 ttactgttgg tacaggtgta ggtcctacat tcgtttcaaa ggtaattggt gtatgtaaag
    31981 cttatacatc acgtgttggt gatggtccat tccctactga attattcgat gaagatggac
    32041 atcatattag agaggttggt cgtgaatacg gtacaacaac aggacgtcca cgtcgtgtag
    32101 gttggtttga ttcagttgta ttacgtcact ctcgtcgtgt aagtggtatt acagatttat
    32161 ctattaactc aatcgatgtt ttaacaggcc tagacacagt gaaaatctgt acagcttatg
    32221 aattagacgg taaagaaatt actgagtacc cagcaaactt agatcaatta aaacgttgta
    32281 aaccaatctt tgaagagtta ccaggttgga cagaagacgt aacaaatgtg cgtactttag
    32341 aagaattacc tgaaaatgca cgtaaatatt tagagcgtat ttcagaatta tgtaatgtac
    32401 aaatttctat cttctcagtt ggtccagata gagaacaaac aaacctatta aaagaattgt
    32461 ggtagaactt tatataagtc atacacaatg attataaata catgagcctt ctatctttat
    32521 tggtaggagg cttttgttat gcttgcttct gtatcgattc gattatttag ataaaaaata
    32581 ctaacgtaaa ggcgatattt gctactcata atttagaaga ttagatgata tttaacgaaa
    32641 attaagatga aatacttgaa tgtaagaagt ctgatgtcga aaatagctat taaaatagag
    32701 tagacgtaag tgtaaatgaa agcacctaaa atagaaaaat ttcaaaaata gcgtaattat
    32761 tataataaat agactgccaa taaaatgcaa tttttcactt ataacattct tcaaaaaata
    32821 atagcaaaat tatgtaaaaa atatcttgtc atggcaagat tggctgtgct ataatctatc
    32881 ttgtgcttaa gaacggctcc ttggtcaagc ggttaagaca ccgccctttc acggcggtaa
    32941 cacgggttcg agtcccgtag gagtcaccat tttttaggtc tcgtagtgta gcggttaaca
    33001 cgcctgcctg tcacgcagga gatcgcgggt tcgattcccg tcgagaccgt acaaatgcct
    33061 atccaagagg ataggcattt ttttgcgttt aatattatat taataaaaga tatatggacg
    33121 aatgataatc atattgattt atctgttcgt ccattttctt taaaatgtat gaacctcaag
    33181 taacttagtg gttggatatg aaagataaac gtagacaata aaatctttat tagacgtaca
    33241 aacatatgct actgtcaaca tatttcttcg ttgtgatatg ccaccagtcc tccataacat
    33301 caattgttaa agtaacgaat aacgaataat gatatttatt ttctgagcaa tgacgtgcaa
    33361 ctagaagttg ccattatcct aattttatta ttggaataga gacctcatca ttgtgttaaa
    33421 tatcattgtc acaatccgcc gtgagaaact aataaaaaat agtaatatat ataagtttat
    33481 attggaaaat agaattaata gcttataaat ggtaaattat ataataggtt actatacgtt
    33541 ataagacgga aaatgcgcac aataacaaaa atagtaagcg acatcctgtg attttttaca
    33601 caaacataaa cgataaagaa caaaaaatga taaaataata ttaatgattt aagaaaagag
    33661 gtttatgcaa atggctagaa aagttgttgt agttgatgat gaaaaaccga ttgctgatat
    33721 tttagaattt aacttaaaaa aagaaggata cgatgtgtac tgtgcatacg atggtaatga
    33781 tgcagtcgac ttaatttatg aagaagaacc agacatcgta ttactagata tcatgttacc
    33841 tggtcgtgat ggtatggaag tatgtcgtga agtgcgcaaa aaatacgaaa tgccaataat
    33901 aatgcttact gctaaagatt cagaaattga taaagtgctt ggtttagaac taggtgcaga
    33961 tgactatgta acgaaaccgt ttagtacgcg tgaattaatc gcacgtgtga aagcgaactt
    34021 acgtcgtcat tactcacaac cagcacaaga cactggaaat gtaacgaatg aaatcacaat
    34081 taaagatatt gtgatttatc cagacgcata ttctattaaa aaacgtggcg aagatattga
    34141 attaacacat cgtgaatttg aattgttcca ttatttatca aaacatatgg gacaagtaat
    34201 gacacgtgaa catttattac aaacagtatg gggctatgat tactttggcg atgtacgtac
    34261 ggtcgatgta acgattcgtc gtttacgtga aaagattgaa gatgatccgt cacatcctga
    34321 atatattgtg acgcgtagag gcgttggata tttcctccaa caacatgagt agaggtcgaa
    34381 acgaatgaag tggctaaaac aactacaatc ccttcatact aaacttgtaa ttgtttatgt
    34441 attactgatt atcattggta tgcaaattat cgggttatat tttacaaata accttgaaaa
    34501 agagctgctt gataatttta agaagaatat tacgcagtac gcgaaacaat tagaaattag
    34561 tattgaaaaa gtatatgacg aaaagggctc cgtaaatgca caaaaagata ttcaaaattt
    34621 attaagtgag tatgccaacc gtcaagaaat tggagaaatt cgttttatag ataaagacca
    34681 aattattatt gcgacgacga agcagtctaa ccgtagtcta atcaatcaaa aagcgaatga
    34741 tagttctgtc caaaaagcac tatcactagg acaatcaaac gatcatttaa ttttaaaaga
    34801 ttatggcggt ggtaaggacc gtgtctgggt atataatatc ccagttaaag tcgataaaaa
    34861 ggtaattggt aatatttata tcgaatcaaa aattaatgac gtttataacc aattaaataa
    34921 tataaatcaa atattcattg ttggtacagc tatttcatta ttaatcacag tcatcctagg
    34981 attctttata gcgcgaacga ttaccaaacc aatcaccgat atgcgtaacc agacggtcga
    35041 aatgtccaga ggtaactata cgcaacgtgt gaagatttat ggtaatgatg aaattggcga
    35101 attagcttta gcatttaata acttgtctaa acgtgtacaa gaagcgcagg ctaatactga
    35161 aagtgagaaa cgtagactgg actcagttat cacccatatg agtgatggta ttattgcaac
    35221 agaccgccgt ggacgtattc gtatcgtcaa tgatatggca ctcaagatgc ttggtatggc
    35281 gaaagaagac atcatcggat attacatgtt aagtgtatta agtcttgaag atgaatttaa
    35341 actggaagaa attcaagaga ataatgatag tttcttatta gatttaaatg aagaagaagg
    35401 tctaatcgca cgtgttaact ttagtacgat tgtgcaggaa acaggatttg taactggtta
    35461 tatcgctgtg ttacatgacg taactgaaca acaacaagtt gaacgtgagc gtcgtgaatt
    35521 tgttgccaat gtatcacatg agttacgtac acctttaact tctatgaata gttacattga
    35581 agcacttgaa gaaggtgcat ggaaagatga ggaacttgcg ccacaatttt tatctgttac
    35641 ccgtgaagaa acagaacgaa tgattcgact ggtcaatgac ttgctacagt tatctaaaat
    35701 ggataatgag tctgatcaaa tcaacaaaga aattatcgac tttaacatgt tcattaataa
    35761 aattattaat cgacatgaaa tgtctgcgaa agatacaaca tttattcgag atattccgaa
    35821 aaagacgatt ttcacagaat ttgatcctga taaaatgacg caagtatttg ataatgtcat
    35881 tacaaatgcg atgaaatatt ctagaggcga taaacgtgtc gagttccacg tgaaacaaaa
    35941 tccactttat aatcgaatga cgattcgtat taaagataat ggcattggta ttcctatcaa
    36001 taaagtcgat aagatattcg accgattcta tcgtgtagat aaggcacgta cgcgtaaaat
    36061 gggtggtact ggattaggac tagccatttc gaaagagatt gtggaagcgc acaatggtcg
    36121 tatttgggca aacagtgtag aaggtcaagg tacatctatc tttatcacac ttccatgtga
    36181 agtcattgaa gacggtgatt gggatgaata ataaggagca tattaaatct gtcattttag
    36241 cactactcgt cttgatgagt gtcgtattga catatatggt atggaacttt tctcctgata
    36301 ttgcaaatgt cgacaataca gatagtaaga agagtgaaac gaaaccttta acgacaacta
    36361 tgacagccaa aatggataca actattacgc catttcagat tattcattcg aaaaatgatc
    36421 atccagaagg aacgattgcg acggtatcta atgtgaataa actgacgaaa cctttgaaaa
    36481 ataaagaagt gaagtccgtg gaacatgttc gtcgtgatca taacttgatg attcctgatt
    36541 tgaacagtga ttttatatta ttcgatttta cgtatgattt accgttatca acatatcttg
    36601 gtcaagtact gaacatgaat gcgaaagtac caaatcattt caatttcaat cgtttggtca
    36661 tagatcatga tgctgatgat aatatcgtgc tttatgctat aagcaaagat cgccacgatt
    36721 acgtaaaatt aacaactaca acgaaaaatg atcatttttt agatgcatta gcagcagtga
    36781 aaaaagatat gcaaccatac acagatatca tcacaaacaa agatacaatt gatcgtacga
    36841 cgcatgtttt tgcaccaagt aaacctgaaa agttaaaaac atatcgcatg gtatttaaca
    36901 cgattagtgt tgagaaaatg aatgctatac tatttgacga ttcaaccatc gttcgtagtt
    36961 caaagagtgg tgttacaacc tacaacaata atacaggtgt cgcaaactat aacgataaaa
    37021 atgaaaaata tcattataaa aacctgtccg aagatgaagc gagttccagc aaaatggaag
    37081 aaacgattcc aggaaccttt gattttatta atggtcatgg tggtttctta aacgaagact
    37141 ttagattgtt tagtacgaat aatcagtcag gcgagttaac atatcaacgt ttccttaatg
    37201 gttatccaac gtttaataaa gaaggttcta atcaaattca agtcacttgg ggtgaaaaag
    37261 gcgtctttga ctatcgtcgt tcgttattac gcaccgacgt tgttttaaat agtgaggata
    37321 ataaatcgtt gccgaaatta gagtctgtac gttcaagctt agcgaacaat agtgatatta
    37381 attttgaaaa agtaacaaac atcgctatcg gttacgaaat gcaggataat tcagatcata
    37441 atcacattga agtgcagatt aacagtgaac tcgtaccgcg ttggtatgta gaatatgatg
    37501 gcgaatggta tgtttataac gatgggaggc ttgaataaat gaactggaaa ctgacaaaga
    37561 cacttttcat tttcgtgttt attcttgtca acatcgtgtt agtatcgatt tatgttaata
    37621 aagtcaatcg ctcacacatt aatgaagtcg agagtaacaa tgaagttaat tttcagcaag
    37681 aagaaattaa agtaccgact agtatattga ataaatcagt taaaggtata aaattagagc
    37741 aaattacagg gcgatcaaaa gactttagtt ctaaagctaa aggcgattcg gatttgacca
    37801 catcagatgg tggaaaatta ttgaatgcga acattagtca atcggtaaag gtcagtgaca
    37861 ataacttaaa agatttgaaa gattatgtta acaagcgcgt atttaaaggt gctgaatatc
    37921 aattaagcga gattagttca gattctgtaa aatatgaaca aacgtatgat gattttccga
    37981 ttttaaataa cagtaaagcg atgttgaact ttaatataga agataacaaa gcgactagtt
    38041 ataaacaatc aatgatggat gacattaagc ccacagatgg tgcagataag aagcatcaag
    38101 tgattggtgt gagaaaagca atcgaggcat tatattataa tcgttacttg aaaaaaggtg
    38161 atgaagtcat taatgctaga ctcggttact actcagtcgt gaatgaaacg aatgttcaat
    38221 tgttacaacc aaactgggaa attaaagtga agcatgacgg taaggataaa acgaatactt
    38281 actatgtcga agcgacaaat aataacccta aaattattaa tcattaatat gaatcgtaat
    38341 aagctagcat tgcaagctca tcatatgtga gaagcggtgc tagctttttt gctggtacgg
    38401 tttattatgg ctgatgtttt tgcgtctcca acgtgcgcat ttattcatat tttaagtaga
    38461 accgcattgt aaaattagtg taactgttat tttaaaaact ttagtatttg tctaatcatt
    38521 gttataataa ttaagaaatt cattgcacgt gattatcaaa atttaaatat aagaaaccgg
    38581 tcgatgaact aaagttacat aataggaaag gtatacaaaa cagctaatat actgatagtt
    38641 tctgtaggga aaatcgtata tttgcactga tgtatattgc agtcatatag agagattgac
    38701 tgtttaaaga gaaaggatga gccgcttgat acgcatgagt gtattagcaa gtggtagtac
    38761 aggtaacgcc acttttgtag aaaatgaaaa aggtagtcta ttagttgatg ttggtttgac
    38821 tggaaagaaa atggaagaat tgtttagtca aattgaccgt aatattcaag atttaaatgg
    38881 tattttagta acccatgaac atattgatca tattaaagga ttaggtgttt tggcgcgtaa
    38941 atatcaattg ccaatttatg cgaatgaaaa gacttggcag gcaattgaaa agaaagatag
    39001 tcgcatccct atggatcaga aattcatttt taatccttat gaaacaaaat ctattgcagg
    39061 tttcgatgtt gaatcgttta acgtgtcaca tgatgcaata gatccgcaat tttatatttt
    39121 ccataataac tataagaagt ttacgatttt aacggatacg ggttacgtgt ctgatcgtat
    39181 gaaaggtatg atacgtggca gcgatgcgtt tatttttgag agtaatcatg acgtcgatat
    39241 gttgagaatg tgtcgttatc catggaagac gaaacaacgt attttaggcg atatgggtca
    39301 tgtatctaat gaggatgcgg ctcatgcaat gacagacgtg attacaggta acacgaaacg
    39361 tatttaccta tcgcatttat cacaagacaa taacatgaaa gatttggcgc gtatgagtgt
    39421 tggccaagta ttgaacgaac acgatattga tacggaaaaa gaagtattgc tatgtgatac
    39481 ggataaagct attccaacgc caatatatac aatataaatg agagtcatcc gataaagttc
    39541 cgcattgctg tgagacgact ttatcgggtg cttttttatg ttgttggtgg gaaatggctg
    39601 ttgttgagtt gaatcggctt gattgaaatg tgtaaaataa ttcgatatta aatgtaattt
    39661 ataaataatt tacataaaat caatcatttt aatataagga ttatgataat atattggtgt
    39721 atgacagtta atggagggaa cgaaatgaaa gctttattac ttaaaacaag tgtatggctc
    39781 gttttgcttt ttagtgtaat gggattatgg caagtctcga acgcggctga gcagcataca
    39841 ccaatgaaag cacatgcagt aacaacgata gacaaagcaa caacagataa gcaacaagta
    39901 ccgccaacaa aggaagcggc tcatcattct ggcaaagaag cggcaaccaa cgtatcagca
    39961 tcagcgcagg gaacagctga tgatacaaac agcaaagtaa catccaacgc accatctaac
    40021 aaaccatcta cagtagtttc aacaaaagta aacgaaacac gcgacgtaga tacacaacaa
    40081 gcctcaacac aaaaaccaac tcacacagca acgttcaaat tatcaaatgc taaaacagca
    40141 tcactttcac cacgaatgtt tgctgctaat gcaccacaaa caacaacaca taaaatatta
    40201 catacaaatg atatccatgg ccgactagcc gaagaaaaag ggcgtgtcat cggtatggct
    40261 aaattaaaaa cagtaaaaga acaagaaaag cctgatttaa tgttagacgc aggagacgcc
    40321 ttccaaggtt taccactttc aaaccagtct aaaggtgaag aaatggctaa agcaatgaat
    40381 gcagtaggtt atgatgctat ggcagtcggt aaccatgaat ttgactttgg atacgatcag
    40441 ttgaaaaagt tagagggtat attagacttc ccgatgctaa gtactaacgt ttataaagat
    40501 ggaaaacgcg cgtttaagcc ttcaacgatt gtaacaaaaa atggtattcg ttatggaatt
    40561 attggtgtaa cgacaccaga aacaaagacg aaaacaagac ctgaaggcat taaaggcgtt
    40621 gaatttagag atccattaca aagtgtgaca gcggaaatga tgcgtattta taaagacgta
    40681 gatacatttg ttgttatatc acatttagga attgatcctt caacacaaga aacatggcgt
    40741 ggtgattact tagtgaaaca attaagtcaa aatccacaat tgaagaaacg tattacagtt
    40801 attgatggtc attcacatac agtacttcaa aatggtcaaa tttataacaa tgatgcattg
    40861 gcacaaacag gtacagcact tgcgaatatc ggtaagatta catttaatta tcgcaatgga
    40921 gaggtatcga atattaaacc gtcattgatt aatgttaaag acgttgaaaa tgtaacaccg
    40981 aacaaagcat tagctgaaca aattaatcaa gctgatcaaa catttagagc acaaactgca
    41041 gaggtaatta ttccaaacaa taccattgat ttcaaaggag aaagagatga cgttagaacg
    41101 cgtgaaacaa atttaggaaa cgcgattgca gatgctatgg aagcgtatgg cgttaagaat
    41161 ttctctaaaa agactgactt tgccgtgaca aatggtggag gtattcgtgc ctctatcgca
    41221 aaaggtaagg tgacacgcta tgatttaatc tcagtattac catttggaaa tacgattgcg
    41281 caaattgatg taaaaggttc agacgtctgg acggctttcg aacatagttt aggcgcacca
    41341 acaacacaaa aggacggtaa gacagtgtta acagcgaatg gcggtttact acatatctct
    41401 gattcaatcc gtgtttacta tgatataaat aaaccgtctg gcaaacgaat taatgctatt
    41461 caaattttaa ataaagagac aggtaagttt gaaaatattg atttaaaacg tgtatatcac
    41521 gtaacgatga atgacttcac agcatcaggt ggcgacggat atagtatgtt cggtggtcct
    41581 agagaagaag gtatttcatt agatcaagta ctagcaagtt atttaaaaac agctaactta
    41641 gctaagtatg atacgacaga accacaacgt atgttattag gtaaaccagc agtaagtgaa
    41701 caaccagcta aaggacaaca aggtagcaaa ggtagtaagt ctggtaaaga tacacaacca
    41761 attggtgacg acaaagtgat ggatccagcg aaaaaaccag ctccaggtaa agttgtattg
    41821 ttgctagcgc atagaggaac tgttagtagc ggtacagaag gttctggtcg cacaatagaa
    41881 ggagctactg tatcaagcaa gagtgggaaa caattggcta gaatgtcagt gcctaaaggt
    41941 agcgcgcatg agaaacagtt accaaaaact ggaactaatc aaagttcaag cccagaagcg
    42001 atgtttgtat tattagcagg tataggttta atcgcgactg tacgacgtag aaaagctagc
    42061 taaaatatat tgaaaataat actactgtat ttcttaaata agaggtacgg tagtgttttt
    42121 ttatgaaaaa aagcgataac cgttgataaa tatgggatat aaaaacgagg ataagtaata
    42181 agacatcaag gtgtttatcc acagaaatgg ggatagttat ccagaattgt gtacaattta
    42241 aagagaaata cccacaatgc ccacagagtt atccacaaat acacaggtta tacactaaaa
    42301 atcgggcata aatgtcagga aaatatcaaa aactgcaaaa aatattggta taataagagg
    42361 gaacagtgtg aacaagttaa taacttgtgg ataactggaa agttgataac aatttggagg
    42421 accaaacgac atgaaaatca ccattttagc tgtagggaaa ctaaaagaga aatattggaa
    42481 gcaagccata gcagaatatg aaaaacgttt aggcccatac accaagatag acatcataga
    42541 agttccagac gaaaaagcac cagaaaatat gagtgacaaa gaaattgagc aagtaaaaga
    42601 aaaagaaggc caacgaatac tagccaaaat caaaccacaa tccacagtca ttacattaga
    42661 aatacaagga aagatgctat cttccgaagg attggcccaa gaattgaacc aacgcatgac
    42721 ccaagggcaa agcgactttg ttttcgtcat tggcggatca aacggcctgc acaaggacgt
    42781 cttacaacgc agtaactacg cactatcatt cagcaaaatg acattcccac atcaaatgat
    42841 gcgggttgtg ttaattgaac aagtgtacag agcatttaag attatgcgag gagaagcata
    42901 tcataaatga tgcggttttt tcagccgctt cataaaggga ttttgaatgt atcagaacat
    42961 atgaggttta tgtgaattgc tgttatgttt ttaagaagct tatcataagt aatgaggttc
    43021 atgatttttg acatagttag cctccgcagt ctttcatttc aagtaaataa tagcgaaata
    43081 ttctttatac tgaatactta tagtgaagca aagttctagc tttgagaaaa ttctttctgc
    43141 aactaaatat agtaaattac ggtaaaatat aaataagtac atattgaaga aaatgagaca
    43201 taatatattt tataatagga gggaatttca aatgatagac aactttatgc aggtccttaa
    43261 attaattaaa gagaaacgta ccaataatgt agttaaaaaa tctgattggg ataaaggtga
    43321 tctatataaa actttagtcc atgataagtt acccaagcag ttaaaagtgc atataaaaga
    43381 agataaatat tcagttgtag ggaaggttgc tactgggaac tatagtaaag ttccttggat
    43441 ttcaatatat gatgagaata taacaaaaga aacaaaggat ggatattatt tggtatatct
    43501 ttttcatccg gaaggagaag gcatatactt atctttgaat caaggatggt caaagataag
    43561 tgatatgttt ccgcgggata aaaatgctgc aaaacaaaga gcattaactt tatcttccga
    43621 actcaataaa tatattacat caaatgaatt taatactgga agattttatt acgcagaaaa
    43681 taaagattca tcttatgatt taaaaaatga ttatccatca ggatattctc atggatcaat
    43741 aagattcaaa tattatgatt tgaatgaagg attcacagaa gaagatatgc tagaggattt
    43801 aaagaaattt ttagaactat ttaatgaatt agcttcaaaa gttacaaaaa catcctatga
    43861 tagcttggtc aatagcatag acgaaataca ggaagacagc gaaattgaag aaattagaac
    43921 agcacaaaaa gataagacac tcaaggaagt ggaagcacct aaaggaataa ttccaaaata
    43981 taaaaaaggt gtatcaaaga ctactaaaaa tgattcagaa attgaaaaat caaataaaga
    44041 gaataaatta accggtaaag ttggagaaaa attagcgcta aattacttta atgagctaat
    44101 tgataataaa atagacgaag ataagaaaga acagtttagg aatattttaa atgataatcc
    44161 aggctctcaa cacggtcatg gctatgattt agtagctttt gatccaacaa atacagataa
    44221 agctgtagaa aaatttattg aaattaaaac atctacatct tctagtattg aggaaccatt
    44281 ttttatgtcg cta
//
LOCUS       DALPQQ010000008        44197 bp    DNA     linear   BCT 22-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus strain K18-6-464
            SAMD00233528-rid16434743.denovo.008, whole genome shotgun sequence.
ACCESSION   DALPQQ010000008 DALPQQ010000000
VERSION     DALPQQ010000008.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMD00233528
            Sequence Read Archive: DRR236061
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 44197)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 44197)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001543423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001543423.1
            Genome Coverage       :: 77x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/22/2022 17:09:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,811
            CDSs (total)                      :: 2,743
            Genes (coding)                    :: 2,689
            CDSs (with protein)               :: 2,689
            Genes (RNA)                       :: 68
            rRNAs                             :: 2, 4, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 4, 2 (16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 54
            CDSs (without protein)            :: 54
            Pseudo Genes (ambiguous residues) :: 0 of 54
            Pseudo Genes (frameshifted)       :: 27 of 54
            Pseudo Genes (incomplete)         :: 27 of 54
            Pseudo Genes (internal stop)      :: 10 of 54
            Pseudo Genes (multiple problems)  :: 10 of 54
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..44197
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMD00233528-rid16434743.denovo.008"
                     /strain="K18-6-464"
                     /db_xref="taxon:1280"
                     /geo_loc_name="Japan: Niigata"
     gene            178..435
                     /locus_tag="O7798_000368"
     CDS             178..435
                     /locus_tag="O7798_000368"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501216.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system Phd/YefM family
                     antitoxin"
                     /protein_id="HDC2862646.1"
                     /translation="MIITSPTEARKDFYQLLKNVNNNHEPIYISGNNAENNAVIIGLE
                     DWKSIQETIYLESTGTMDKVREREKDNSGTTNIDDIDWDNL"
     gene            435..701
                     /locus_tag="O7798_000369"
     CDS             435..701
                     /locus_tag="O7798_000369"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501215.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Txe/YoeB family addiction module toxin"
                     /protein_id="HDC2862647.1"
                     /translation="MSNYTVKIKNSAKSDLKKIKHSYLKKSFLEIVETLKNDPYKITQ
                     SFEKLEPKYLERYSRRINHQHRVVYTVDDRNKEVLILSAWSHYD"
     gene            1056..2132
                     /locus_tag="O7798_000370"
     CDS             1056..2132
                     /locus_tag="O7798_000370"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501214.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M42 family metallopeptidase"
                     /protein_id="HDC2862648.1"
                     /translation="MNQSVKLLKHLTDVNGIAGYEMQVKEAMRNYIEPVSDQIIEDNL
                     GGIFGKKNAENGQYSIMISGHMDEVGFMVTKIDKHGFISFTPVGGWWNQVMLSQKVTI
                     TTDSGKEIRGIIGSKPPHVLTPEERKKPMEIKNMFIDIGVSSKEEAEEAGVEVGNMVT
                     PYSEFEVLANDKYLTAKAFDNRYGCALAIEVLKRLKDENIGINLYSGATVQEEVGLRG
                     AKVAANTIKPDLAIAVDVGIAYDTPGMSGQTSDSKLGGGPVVIMMDATSIAHQGLRKH
                     IKDVAKEHNIEVQWDTTPGGGTDAGSIHVANEGIPTMTIGVTLRYMHSNVSVLNVDDY
                     ENSIRLVTEIVRSLNDESYKNIMW"
     gene            2380..3042
                     /locus_tag="O7798_000371"
     CDS             2380..3042
                     /locus_tag="O7798_000371"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501213.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HDC2862649.1"
                     /translation="MLLEIKDLVYKASDRIILDHISLKVDKGESIAIIGPSGSGKSTF
                     QKQICNLFSPTSGELYFKGKPYNDYDPEELRQRISYLMQQSDLFGETIEDNMIFPSLA
                     RNDKFDRKRAKQLIKDVGLGHYQLSSEVENMSGGERQRIAIARQLMYTPDILLLDEST
                     SALDVNNKEKIENIIFKLADQGVAIMWITHSDDQSMRHFQKRITIVDGQISNTEELNQ
                     HE"
     gene            3035..3811
                     /gene="fetB"
                     /locus_tag="O7798_000372"
     CDS             3035..3811
                     /gene="fetB"
                     /locus_tag="O7798_000372"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501212.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron export ABC transporter permease subunit
                     FetB"
                     /protein_id="HDC2862650.1"
                     /translation="MSNTALGLTALLLVIPIIISYKEGLHIIKDLIVATLRAVVQLII
                     LGFLLHYIFKINDKWLLILCVLVIIINASWNTISRASPVMHHVFWISFLAIFIGTALP
                     LAGTIATGAIQFTANEVIPIGGMLANNGLIAINLAYQNLDRAFVQDGTNIESKLSLAA
                     TPKLASKGAIRESIRLAIVPTIDSVKTYGLVSIPGMMTGLIIGGVPPLQAIKFQLLVV
                     FIHTTATIMSALIATYLSYGQFFNARHQLVARNTDVKSES"
     gene            4207..5394
                     /locus_tag="O7798_000373"
     CDS             4207..5394
                     /locus_tag="O7798_000373"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000026193.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HDC2862651.1"
                     /translation="MSIMRLFTFILSIFIVGMVEMMVAGIMNLMSQDLHVSEAVVGQL
                     VTMYALTFAICGPILVKLTNRFSSRPVLLWTLLIFIIGNGIIAVAPNFSILVVGRIIS
                     SAAAALIIVKVLAITAMLSAPKNRGKMIGLVYTGFSGANVFGVPIGTVIGDLVGWRYT
                     FLFLIIVSIIVGFLMMIYLPKDQEIQRGPVNHETPSHENHVTSKILRPAEVAKYLIIT
                     FLVLIANSVTFVFINPLILSNGHDMSFVSLALLVNGIAGVIGTSLGGIFSDKITSKRW
                     LMISVSIFIVMMLLMNLILPGSGLLLAGLFIWNIMQWSTNPAVQSGVIQHVEGDTSQV
                     MSWNMSSLNAGIGVGGIIGGLVMTHVSVQAITYTSAIIGALGLIVVFTLKNNHYAKTF
                     KSS"
     gene            complement(5456..6808)
                     /locus_tag="O7798_000374"
     CDS             complement(5456..6808)
                     /locus_tag="O7798_000374"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501210.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxylesterase/lipase family protein"
                     /protein_id="HDC2862652.1"
                     /translation="MKINTTGGQIHGITQDGLDIFLGIPYAEPPVHDNRFKHSTLKTQ
                     WSEPIDATEIQPIPPQPDNKLEDFFSSQSTTFTEHEDCLYLNIWKQHNDQTKKPVIIY
                     FYGGSFENGHGTAELYQPAHLVQNNDIIVITCNYRLGALGYLDWSYFNKDFHSNNGLS
                     DQINVIKWVHQFIESFGGDANNITLMGQSAGSMSILTLLKIPDIEPYFHKVVLLSGAL
                     RLDTLESARNKAQHFQKMMLDYLDTDDVTSLSTNDILMLMAKLKQSRGPSKGLDLIYA
                     PIKTDYIQNNYPTTKPIFACYTKDEGDIYITSEQKKLSPQRFIDIMELNDIPLKYEDV
                     QTAKQQSLAITHCYFKQPMKQFLQQLNIQDSNAQLWLAEFAWHDTSSAHYRSAYHILD
                     MVFWFGNLQILAAHQYPTTAHLKFLSRQMQNDLANFAKSGKMPWPMYHNERRYYRTYQ
                     "
     gene            complement(7416..9053)
                     /locus_tag="O7798_000375"
     CDS             complement(7416..9053)
                     /locus_tag="O7798_000375"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501209.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="APC family permease"
                     /protein_id="HDC2862653.1"
                     /translation="MNKDKQLHNDKINLSQLVLLGLGSLIGSGWLFGAWEASSIAGPA
                     AIISWVLGFLVIGTIAYNYIEIGTMFPQSGGMSNYAQYTHGSLLGFIAAWANWVSLVT
                     IIPIEAVSAVQYMSSWPWHWAKPMRYLMENGSISTYGLLAVYLIIVIFSLLNYWSVKL
                     LTSFTSLISVFKLGVPMLTIIMLMLSGFDTSNYGHSASTFMPYGSAPIFAATTASGII
                     FSFNSFQTIINMGSEIKNPEKNIARGIAISLSISAVLYIILQSTFITSMPQSMLQHSG
                     WNGINFNSPFADLAILLGINWLAILLYIEAFVSPFGTGVSFVAVTGRVLRAMEKNGHI
                     PKFLGKMNEKYHIPRVAIIFNAIISMIMVTLFRDWGTLAAVISTATLVAYLTGPTTVI
                     ALRKMGPTMTRPFRAKILKVMSPLSFVLASLAIYWAMWPTTAEVILIIILGLPIYFFY
                     EYRMNWRNTKKQIGGSLWIIVYLIVLSILSFIGSKEFKGLNMIHYPFDFIVIIIVALI
                     FYYIGTTSSFESVYFRRATRINTKMRESLNNESKSSH"
     gene            9233..9832
                     /locus_tag="O7798_000376"
     CDS             9233..9832
                     /locus_tag="O7798_000376"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501208.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YdeI family protein"
                     /protein_id="HDC2862654.1"
                     /translation="MSEKQSNEQVEAFLNKESQWQEEYKYLRALIFNETELEEAYKWM
                     HPCYTLNNKNVVLIHGFKNYVALLFHKGAILEDKYHTLIQQTEKVQAARQLRFENLTE
                     IQARTEEIKYYLAEAIKAEKVGKKVEMKKTEEYVIPKELEAKFEEMPQLESSFYKLTP
                     GRQHQYIYHIGQAKRSETRQKRVEKYINQILEGKGMHDK"
     gene            9836..9976
                     /locus_tag="O7798_000377"
     CDS             9836..9976
                     /locus_tag="O7798_000377"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501207.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDC2862655.1"
                     /translation="MSKAYRLYNNIQDDTKQPMAHAVGCFFRCVCHGQHFDVGIPLQA
                     WE"
     gene            10056..10175
                     /locus_tag="O7798_000378"
     CDS             10056..10175
                     /locus_tag="O7798_000378"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501206.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDC2862656.1"
                     /translation="MGGCPSVTMDACALLQKFDFCNNISHFRHFFAIKQPIER"
     gene            10502..11728
                     /locus_tag="O7798_000379"
     CDS             10502..11728
                     /locus_tag="O7798_000379"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501205.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HDC2862657.1"
                     /translation="MLSIKHLTKIYSGNKKAVDDISLDIQSGEFIAFIGTSGSGKTTA
                     LRMINRMIEATEGQIEIDGKDVRSMNPVELRRNIGYVIQQIGLMPHMTIKENIVLVPK
                     LLKWTKEEKDKRAKELIKLVDLPESFLERYPAELSGGQQQRIGVVRALAAEQDIILMD
                     EPFGALDPITRDTLQDLVKTLQRKLGKTFIFVTHDMDEAIKLADKICIMSEGKVVQFD
                     TPDNILRHPANDFVRDFIGQNRLIQDRPNDKTVEGVMIKPITIQAEATLNDAVHIMRQ
                     KRVDTIFVVDSNNHLLGFLDIEDINQGIRGHKSLRDTMQQHIYTVQIDSKLQDSVRTI
                     LKRNVRNVPVVDDQQRLVGLITRANVVDIVYDTIWGDSEDTVQTEHVGEDTASSKVHE
                     QHTTNVKVRDIGDDKS"
     gene            11725..12360
                     /locus_tag="O7798_000380"
     CDS             11725..12360
                     /locus_tag="O7798_000380"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501204.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HDC2862658.1"
                     /translation="MIEFLHEHGGQLMSKTLEHFYISIVALLLAIIVAVPIGILLSKT
                     KRTANIVLTVAGVLQTIPTLAVLAIMIPIFGVGKTPAIVALFIYVLLPILNNTVLGVQ
                     NIDSNIKEAGKSMGMTQFQLMKDVELPLALPLIIGGIRLSSVYVISWATLASYVGAGG
                     LGDFIFNGLNLYDPLMIVTATVLVTALALGVDALLALVEKWVVPKGLKVSG"
     gene            12377..13318
                     /locus_tag="O7798_000381"
     CDS             12377..13318
                     /locus_tag="O7798_000381"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501203.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="osmoprotectant ABC transporter substrate-binding
                     protein"
                     /protein_id="HDC2862659.1"
                     /translation="MKKIKYILVVFVLSLTVLSGCSLPGLGSKSTKNDVKITALSTSE
                     SQIISHMLRLLIEHDTHGKIKPTLVNNLGSSTIQHNALINGDANISGVRYNGTDLTGA
                     LKEAPIKNPKKAMIATQQGFKKKFDQTFFDSYGFANTYAFMVTKETAKKYHLETVSDL
                     AKHSKDLRLGMDSSWMNRKGDGYEGFKKEYGFDFGTVRPMQIGLVYDALNSEKLDVAL
                     GYSTDGRIAAYDLKVLKDDKQFFPPYAASAVATNELLRQHPELKTTINKLTGKISTSE
                     MQRLNYEADGKGKEPAVVAEEFLKKHHYFDKQKGGHK"
     gene            13318..14013
                     /locus_tag="O7798_000382"
     CDS             13318..14013
                     /locus_tag="O7798_000382"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501202.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HDC2862660.1"
                     /translation="MEGNLLQQLFNYYVTNFGYLWDLFFKHLLMSVYGVLFAALIGIP
                     LGILLARYTKLSGFVITIANIIQTVPVIAMLAILMLVMGLGSETVVLTVFLYALLPII
                     KNTYTGIASVDANIKDAGKGMGMTRNQVLRMIELPLSVSVIIGGIRIALVVAIGVVAV
                     GSFIGAPTLGDIVIRGTNATDGTTFILAGAIPIAIIAIVIDVLLRFLEKRLDPTTRHR
                     KNQSNHRPQSINM"
     gene            14307..15707
                     /locus_tag="O7798_000383"
     CDS             14307..15707
                     /locus_tag="O7798_000383"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501201.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HDC2862661.1"
                     /translation="MDTSKQFRGDNRLLLGIVLGVITFWLFAQSLVNLVVPLQSTYSS
                     DVGTINIAVSLSALFAGLFIVGAGDVADKFGRVKITYVGLILNVVGSLLIIITPLPAF
                     LIIGRIIQGLSAACIMPSTLAIINEYYIGTRRQRALSYWSIGSWGGSGICTLFGGLMA
                     TYIGWRSIFVVSILLTLLAMYLIKHAPETKAEPIKGMKAEAKKFDVIGLVILVVTMLS
                     LNVIITQTSHFGLVSPLILGLIVVFICSLVGFVYYENKIKHPLVDFSIFKNRGYSGAT
                     ISNFLLNGVAGGALIVINTYYQQQLGFNSSQTGYISLTYLITVLSMIRVGEKILSQHG
                     PKRPLLLGSGFTVIGLILLSLTFLPEVWYIISSIVGYLLFGTGLGLYATPSTDTAVAS
                     APDDKSGVASGVYKMASSLGNAFGVAVSGTVYTVLAANLNLNLGGFTGMMFNALLAIV
                     AFLVILLLVPKNQTNL"
     gene            15933..16868
                     /locus_tag="O7798_000384"
     CDS             15933..16868
                     /locus_tag="O7798_000384"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501200.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-dehydropantoate 2-reductase"
                     /protein_id="HDC2862662.1"
                     /translation="MKIAIAGSGALGSGFGAKLFQAGYDVTLIDGYTSHVEAVKQHGL
                     NITINGEAFELNIPMYHFNDQPDESIYDVVFLFPKSMQLKEVMEDMKPHIDNETIVVC
                     TMNGLKHEEVIAQYVAQSQIVRGVTTWTAGLESPGHSHLLGSGPVEIGELVDEGKENV
                     IKVADLLNEAELNGVISKDLYQSIWKKICVNGTANALSTVLECNMASLNESSYAKCLI
                     YKLTQEIVHVATIDNVHLNVDEVFEYLVDLNEKVGAHYPSMYQDLIVNNRKTEIDYIN
                     GAVATLGKQRHIEAPVNRFITDLIHTKESQRHAQD"
     gene            17190..18041
                     /locus_tag="O7798_000385"
     CDS             17190..18041
                     /locus_tag="O7798_000385"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501198.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-dependent oxidoreductase"
                     /protein_id="HDC2862663.1"
                     /translation="MSKIFVTGATGLIGIKLVQRLKEEGHEVAGFTTSENGQQKLAAV
                     NVKAYIGDILKADTIDQALADFKPEIIINQITDLKNVDMAANTKVRIEGSKNLIDAAK
                     KHDVKKVIAQSIAFMYEPGEGLANEETSLDFNSTGDRKVTVDGVVGLEEETARMDEYV
                     VLRFGWLYGPGTWYGKDGMIYNQFMDGQVTLSDGVTSFVHLDDAVETSIQAIHFENGI
                     YNVADDAPVKGSEFAEWYKEQLGVEPNIDIQPAQPFERGVSNEKFKAQGGTLIYQTWK
                     DGMNPIK"
     gene            complement(18133..19629)
                     /locus_tag="O7798_000386"
     CDS             complement(18133..19629)
                     /locus_tag="O7798_000386"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501197.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="beta-lactamase family protein"
                     /protein_id="HDC2862664.1"
                     /translation="MTTKKLYFLSISIIILVAISIAIYITLNSNTKTRLTNDSQQQID
                     TIIEHDLQKGHIPGASILIVKNGKVFLNKGYGYQDVDKKVKASPTTKYEIASNTKAFT
                     GLAILKLAQEGRLNLNDAVSKHVPHFKMNYNGQNETITIKQLLAQTSGIPSDITSEDS
                     VTSKNNRLNDVTRAIMGDELHHKPGEEFEYSNMNYDLLGLIIQNVTKQSYTKYITNSW
                     LKPLHMTHTSFKQTNYKSKHDAIGYELQGSTPVVSKPEFNLWDTPSAYMMTSTEDLEH
                     WIKFQLNPPDKYKSLVQQSHKNLSSTIGEPNANAYASGWFTNNDEHLVFHSGTLDNFS
                     SFILLNPKQNYGIVVLANLNSEYVPKLVEHLNTQIVNHKRYSTVASMLNQYKDQFNIV
                     TVLMTTLILLAFIFSAYRAWQMRHGQILLRRSKRIAVLSWLSLCICIALALILYALPY
                     LILGSNNWSFVLTWLPIEIKLALITTLIALFSTLIVILLFLHTKITKT"
     gene            19861..21690
                     /locus_tag="O7798_000387"
     CDS             19861..21690
                     /locus_tag="O7798_000387"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501195.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="APC family permease"
                     /protein_id="HDC2862665.1"
                     /translation="MFNQFKRLIIGQPKKNRELKDEKISKFKGLAILSSDALSSVAYG
                     PEQILITLSVVGAVATWYTLPIAGAVLILLAALIMSYRQIIYAYPKGGGAYMVSKTNL
                     GEKWGLLAGGSLLVDYILTVAVSISSGADAFVAAFPSLYGHKVLIACLLVLFILILNL
                     RGLTESATVLSYPVYLFIIGLVILIFIGTFRVATGDIQPHMHASVGTAVPGVTLFLLL
                     KAFSSGASSLTGVEAISNAVTNFREPSAKNAVKTLIAMGSILAFLLVGIVGLAYVYGI
                     LPQTETTVLSQLAMQIFGDNAAFYFVQATTVMILVLAANTGFTAFPMLAASMSKDKYM
                     PRMFTVRGDRLGYSNSIIILGVLAIILIIVFDGMTEDLIPLYAVGVFIPFTLAQFGMV
                     IKWIHERPKNWLSKLSVNLLGGIVTFIVFMILLITKFSQVWPILIFLPFVVIFFLKIN
                     KHYRDIAEQLRSDIDVLNVDVVDRNLAIVPITSITTAVDKSIYYAQMLANNDVIAVHV
                     SFGDEDEKAFQEKWKRHFPDVRLVILHSEYRSIIRPISRFIDKINRKANDQNYMITVV
                     IPEFITKKRWHNLLHNQTSLRMKLYLIYQKNVNVCTIPFKLKK"
     gene            complement(21830..23908)
                     /locus_tag="O7798_000388"
     CDS             complement(21830..23908)
                     /locus_tag="O7798_000388"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501193.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sodium:proton antiporter"
                     /protein_id="HDC2862666.1"
                     /translation="MALLEAFLIFIFAVIISSVINNRFPQIPTAFIQIALGVVIFIIP
                     IQVDFQFNSEVFMFAVIAPLLFVEGTHVSRTKLLEYRKPILLMSMALVFATVVGVGYF
                     IHWIWPALPMPAAFAIAAILCPTDAVAVSAITRGKLLPKGSMTILEGESLLNDAAGII
                     SFKIAVTALVTGTFSLFQAVEQFIISTILGVLIGAIIGFVVVRIRIDLTANKGLKDNN
                     TLTFIQLLTPFVVYFLAEEVHASGIIAVVIAGLIHGLERDRLIRAQTELQMNYHQIWN
                     TFSYALNGFVFVVLGFMIPTVVIDIFQTEPDNFSFLIVITILIAIAIYACRFVWVYFW
                     YKDFYFPKNIQSYLDEEHDSHETPPSRVRYAFIMTMCGIHGTISLSMALTLPFIITKG
                     QAFEYRNDLLFIASFMVLISLILAQIVLPLITPSAEDTTFKGMTYQSAKIFIVQKVIQ
                     HFKNESKKDKNDTNYRPVLNQYYGELLFLLNSEPDNQNTKELKRLEDIAKVIETSTLE
                     RLIDKGKATYQDINNYRNIVELTETHRTASFVEKFANFFKMLWLRLKAMKHYKALNKE
                     SKKQEFENSFKDVQKIMRIVNHNIILRLKEEQNSTNVLEVSLVINHYYDMSRSLKWRA
                     QRRKERQENSNQIIPQAMFHNHKLEALYLQRHLLDELIRKNKINNIVAAQIRENINYN
                     EIVLSLQSKH"
     gene            complement(24046..25455)
                     /locus_tag="O7798_000389"
     CDS             complement(24046..25455)
                     /locus_tag="O7798_000389"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501192.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid permease"
                     /protein_id="HDC2862667.1"
                     /translation="MARKLHRELNNRHIQLIAIGGAIGTGLFLGSGQTISLTGPSLLF
                     TYMIIGVVLFAFMRALGELLLSNTRFNSFVDIANEYLGPFGGFVIGWTYWLCWIVSSM
                     SDLTAMGQYFAFWYPQVPNWITVLFIVLILISFNLLGARLFGELEFWFSIIKVVTIIA
                     MVIVGLVLIFFSFKTHYGHASFTNLISHGGMFPGGTFGFLMSFQIAVYSFIGIELIGV
                     TAGETKDPEKTLPKAINNVPIRILLFYIGGLLVIMSVIPWNDIDPNSSPFVKLFTLIG
                     VPFAAGVVNFVVLTAAASATNSGIYSNSRILFGLSQQGLGPKVLNKTNSHGVPYLSML
                     VSSIALLIAALLNYIFPNAIQLFIYVTTLSTVLFLVVWAMIIVAYLMYLKKHPEAHKN
                     SKFKLIGGKPIAYIILAFFFFVFILLFFSDETRAAIYISPFWFIFLFFFYKKYKTNAE
                     KLAYEQRQNDSGHFRYDNQ"
     gene            25742..26548
                     /locus_tag="O7798_000390"
     CDS             25742..26548
                     /locus_tag="O7798_000390"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501191.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metallophosphoesterase"
                     /protein_id="HDC2862668.1"
                     /translation="MKIGTIADLHIDRHNKKTSEDYLEALVEIVKYKKLDILLIAGDI
                     SNHYQLTHQFITQLTKQLDIPVKFVPGNHDLWEVESMTTQDIWNNYKSMSQCLVGKPF
                     IVNEEWAIIGHTGWYDYSFAAQRFSLDELQKGKHYGATWQDKERISWGISDQNLSKIA
                     AEQVKKDILEVGNRRVILVTHVVTHPDFIVPMPHRIFDFYNAFIGTSDFNPLYAMFDI
                     PYSIMGHVHFRKSVIDDGRCYLCPCLGYPRQWRSEDIYQEINETIQIIEI"
     gene            complement(26611..27267)
                     /locus_tag="O7798_000391"
     CDS             complement(26611..27267)
                     /locus_tag="O7798_000391"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001080277.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="C39 family peptidase"
                     /protein_id="HDC2862669.1"
                     /translation="MNRKILPVKPISQLFPIPMVMGCEGVSAAMMLQYNNQHIPATEI
                     MRHWPTHPNNPHKGYVGHHLFIKLGNYHQTIFPEAYVPFLQKYNPNIVDGTGKSLEDL
                     KGIIDQGQPVLIYHTNLGSKPLLRVFRFDNKPAKQVSNIHVTLLIGYDDYYYYYIDPL
                     WSHIRRGLVLPAIIPNRKQIIKIRKEKMEYSFNSPGRKCIYVQPHSYTIENQQQNKHT
                     "
     gene            27380..27853
                     /locus_tag="O7798_000392"
     CDS             27380..27853
                     /locus_tag="O7798_000392"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501189.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AraC family transcriptional regulator"
                     /protein_id="HDC2862670.1"
                     /translation="MEYQLQQLASLTLVGIKETYENGRQAQQHIAGFWQRCYQEGVIA
                     DLQLKNNGDLAGILGLCIPELDGKMSYMIAVTGDNSADIEKYDVITLASSKYMVFEAQ
                     GAVPKAVQQKMEEVHHYIHQYQADTVKSAPFFELYQDGDTTSEKYITEIWMPVKG"
     gene            complement(27976..29187)
                     /locus_tag="O7798_000393"
     CDS             complement(27976..29187)
                     /locus_tag="O7798_000393"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501188.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug effflux MFS transporter"
                     /protein_id="HDC2862671.1"
                     /translation="MQSTKTKTKHFSFLLLITLGVMTAFGPLTIDMYVPSLPKVQGDF
                     GSTTSEIQLTLSFTMIGLALGQFIFGPLSDAFGRKRIAVSILIIFILVSGLSMFVDQL
                     PLFLTLRFIQGLTGGGVIVIAKASAGDKFSGNALAKFLASLMVVNGIITILAPLAGGL
                     ALSVATWRSIFTILTIVALIILIGVASQLPKTSKDELKQVNFSSVIKDFGSLLKKPAF
                     IIPMLLQGLTYVMLFSYSSASPFITQKLYNMTPQQFSIMFAVNGVGLIIVSQVVALLV
                     EKLHRHILLIILTIIQVVGVALIILTLTFHLPLWVLLIAFFLNVCPVTSIGPLGFTMA
                     MEERTGGSGNASSLLGLFQFILGGAVAPLVGLKGEFNTSPYMIIIFITAILLVSLQII
                     YFKMIKKQHVA"
     gene            complement(29369..30028)
                     /locus_tag="O7798_000394"
     CDS             complement(29369..30028)
                     /locus_tag="O7798_000394"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501187.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDC2862672.1"
                     /translation="MKRTDKYRDSYQYDNQNQNHRRQSEDASYRQQYAKGDPEEHPER
                     YYNGRDYRREQILEEENEKSRRSKKWLYIIIAILLIIVAIFVTRALLNNDSDKVSNDP
                     KVSQNYKKQVENQDGQINQQVDNAKENIKNNQKTDDIIKNLQNQIDNLKQQEQNKADS
                     KLTQFYQDQINKLTEANNALKNNASQGKIESMLNDINTKFDSIKSKLESLFKDDNGGA
                     N"
     gene            complement(30088..31230)
                     /locus_tag="O7798_000395"
     CDS             complement(30088..31230)
                     /locus_tag="O7798_000395"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501186.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycerate kinase"
                     /protein_id="HDC2862673.1"
                     /translation="MQLQKIVIAPDSFKESMTAQQVGNIIKQAFTNVYGNTLHYDIIP
                     MADGGEGTTDALMHATGATKYTVIVNDPLMRPIEACYARADEQQIAIIEMAAASGLDL
                     LEKEERNPLYTSSYGTGELIKDALNHGAKTIILGIGGSATNDGGTGMLSALGVKFTDV
                     NGDLLQMNGANLAHIAQIDITNLDSRLKEVTFKVACDVSNPLLGENGATYIYGPQKGA
                     DAKMIPKLDFAMSHYHDKIKMCTGKSVNQIPGSGAAGGMGAALLAFCETTLTKGIDVV
                     FDITDFHQRIKDADLVITGEGRMDYQTIFGKTPVGVALAAKQYHIPVIAICGSLGENY
                     QHVYDFGIDSAYSIISSPSTLEDVLQNNEQNLLNTATDIARILKLQ"
     gene            31498..31884
                     /gene="gtxA"
                     /locus_tag="O7798_000396"
     CDS             31498..31884
                     /gene="gtxA"
                     /locus_tag="O7798_000396"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501185.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flippase GtxA"
                     /protein_id="HDC2862674.1"
                     /translation="MKLTQTHAEILKFIIVGGINTLNYYVVYLLLLKLLHIEYMISHI
                     TGFLVAFVISYYLNCYFVYRVKPTWRKFISFPITQIVNVSLQTVLLYVFVSWLNLPAE
                     IAPFAGLIITIPITFILSKWILKDSN"
     gene            32017..32124
                     /locus_tag="O7798_000397"
     CDS             32017..32124
                     /locus_tag="O7798_000397"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501184.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I toxin-antitoxin system Fst family toxin"
                     /protein_id="HDC2862675.1"
                     /translation="MFNLLINIMTSAISGCLVAFFAHWLRTRNNKKGDK"
     gene            32752..34515
                     /locus_tag="O7798_000398"
     CDS             32752..34515
                     /locus_tag="O7798_000398"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501182.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HDC2862676.1"
                     /translation="MNNQTNWIKILSGFASDSKWKIMLSILLSIISVFSGLVPYWAVF
                     KIILMMINNTYTINSIMVYIFIALIAYISQVCCFGASTMLSHITAYEILSEIRKKLAQ
                     KLMRLPLGVVESKKIGELKNIFVDKVETIELPLAHMIPEVIGNLLLSAAIFLYIMLID
                     WRMASALLVTIPISIFAFKKVMSGFNETYAEQMKSNNYMNSAIVEFIEGIEVIKTFNQ
                     SQSSYKKYKDAVDNYKIHTLNWFKNTWGYMNLGASVLPSTFLGILPVGMYLISINQLN
                     YAEFFLCIVLSLGVVAPIKNFTNYVNHLKSIQYALTEVNQILSLEELVLSTKFKKPQH
                     YEIAFNNVGFSYNKDKDDLVFKHLSFTVPENNFTAIVGASGSGKSTIAKLISRYWDVT
                     SGEITIGGINIKDIESKQLNDLVGFVGQDNFLLNLTFKENIKLGNPEATDEAVEKAAK
                     LAQCHEFIEKLPDGYDTNVGTVGDKLSGGEKQRVTIARMILKDAPIIVLDEATVYVDP
                     DNEQKIQEALNVLTQDKTLIVIAHRLSTIQHADQIIVLGKQQILEKGSHHLLLKLNGN
                     YKKMWDTHMHTKDWGINTGHN"
     gene            34540..36273
                     /locus_tag="O7798_000399"
     CDS             34540..36273
                     /locus_tag="O7798_000399"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501181.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HDC2862677.1"
                     /translation="MFQITFKILNWIRPYKARMILGFSMSFLNAIFIALPIFLAAKIF
                     NNVLSHKPIYMKDILNVVIIMVLLVIGRFITAYFKSKSHESIAYEMSAKERLDIGDKL
                     KNVRLGYFNSHHSNELTTIVTTDLTFLENFAMKMVDVVVNGYILITVLILSLLVVSWQ
                     VSLLACIGVLLSFFAIQLLERKSRQNAPAYHNVQNQLVEKVLEVIRGIQVIKSFAKEN
                     TSLKSFNQAVNESKRINTKIEMQYIPFNLLHLLSLKVVSIMIVLVACLLYMNHSIDLP
                     TLIMISIFSFVIFDSVENINSAAHVLEMIDMTIDDIEKIKNAPELDENGKNLTIKNEN
                     IAFQNVNFSYDDKQVIKNVNFEIPTQTSTAIIGPSGSGKSTLCHLLLRFYDIDDGNIR
                     IDGVDIKDMTLSTLMSKISAVFQKVYLFNDTIENNILFGNPGATKEEIIRAAKQACCH
                     DFIMSLPEGYQTMLNEKGSNLSGGEKQRISIARAILKDAPIIILDEATASIDPENEQL
                     IQTAINELSKGKTVITIAHKLETIKNADQIIVLNEGEIIQKGSHDELIRKPGMYQDFI
                     RIKSKSAGWKL"
     gene            36504..36671
                     /locus_tag="O7798_000400"
     CDS             36504..36671
                     /locus_tag="O7798_000400"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501179.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDC2862678.1"
                     /translation="MQLLILTDIFYRIAVYICPNSLRSLSHFNSKVKILPKFIVILRS
                     LNSCFLEKHAP"
     gene            36725..37411
                     /gene="bioD"
                     /locus_tag="O7798_000401"
     CDS             36725..37411
                     /gene="bioD"
                     /locus_tag="O7798_000401"
                     /EC_number="6.3.3.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501178.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dethiobiotin synthase"
                     /protein_id="HDC2862679.1"
                     /translation="MRIFITSTNTDVGKTYVTKHLYHALKTRGHRVCIFKPFQTEERQ
                     DGTFPDLEVFKNECDLSYDITSLYTFKQPVSPHLAFKMTDQIFLNKQRVLDKVKVLDK
                     EFDFILIEGAGGIAVPIYEGTDDFYMTKDLINDCADCVISVLPSKLGAISDAIVHQDY
                     VNQNVSASNFLIMNRYTDSYIEKDNQMTIGKLTNKTVYTFEEHATYENFSEAFLKQLI
                     GVKNELHTTT"
     gene            37389..38747
                     /gene="bioA"
                     /locus_tag="O7798_000402"
     CDS             37389..38747
                     /gene="bioA"
                     /locus_tag="O7798_000402"
                     /EC_number="2.6.1.62"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501177.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adenosylmethionine--8-amino-7-oxononanoate
                     transaminase"
                     /protein_id="HDC2862680.1"
                     /translation="MNYTQQLKQKDSEYVWHPFTQMGVYSKEEAIIIEKGKGSYLYDT
                     NGNKYLDGYASLWVNVHGHNNKYLNKVIKKQLNKIAHSTLLGSSNIPSIELAEKLIEI
                     TPSNLRKVFYSDTGSASVEIAIKMAYQYWKNIDREKYAKKNKFITLNHGYHGDTIGAV
                     SVGGIKTFHKIFKDLIFENIQVESPSFYRSNYDTENEMMTAILTNIEQILIERNDEIA
                     GFILEPLIQGATGLFVHPKGFLKEVEKLCKKYDVLLICDEVAVGFGRTGKMFACNHED
                     VQPDIMCLGKAITGGYLPLAATLTSKKIYNAFLSDSHGVNTFFHGHTYTGNQIVCTVA
                     LENIRLYEKRKLLSHIETTSSTLEKQLHALKRHRNVGDVRGRGLMFGVELVTDKDSKT
                     PLEIEKVERIVRNCKENGLMIRNLENVITFVPVLSMSNKEVKTMVRIFKKAVHNILDR
                     KC"
     gene            38749..39756
                     /gene="bioB"
                     /locus_tag="O7798_000403"
     CDS             38749..39756
                     /gene="bioB"
                     /locus_tag="O7798_000403"
                     /EC_number="2.8.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501176.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="biotin synthase BioB"
                     /protein_id="HDC2862681.1"
                     /translation="MNLAKRILQGEQLTKETVLKIYEDTNIDTLDLLNEAYILRKHYF
                     GKKVKLNMILNAKSGICPENCGYCGQSRDIKQKQRYALIPEEQIIDGAKVAHDNHIGT
                     YCIVMSGRGPSDKEVDHISNTVRTIKSQHPQLKICACLGLTNDEQAKKLKSAGVDRYN
                     HNINTSENYHDNVVTTHSYKDRTDTIELMKANNISPCSGVICGMGESNQDIVDMAFAL
                     KEMDADSIPINFLHPIKGTKFGSMDDLTPMKCLRIVALFRLINPTKEIRIAGGREVNL
                     RSLQPLALKAANSIFVGDYLITGGQPNQLDYDMINDLGFEIDYDTCENKENKNEVSRA
                     N"
     gene            39734..40849
                     /locus_tag="O7798_000404"
     CDS             39734..40849
                     /locus_tag="O7798_000404"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501175.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxal phosphate-dependent aminotransferase
                     family protein"
                     /protein_id="HDC2862682.1"
                     /translation="MKFQEQIDLLQQKGLYRSLKSVGYIDRQYIEVENKRCTNYTSND
                     YLGLGQIAFDKDDFERFMRKYSYHLSSSRLISGSSTAYEEIETMLAGWLGYSACTILN
                     SGYDANLALFNIFKNTNCVVFSDQENHASIIDGIKLSGLEKVIYKHLDIADLEKRLEK
                     YPNQNIPKIIISDSVFSTNGDVVDIGQLVSLKHKYNATLILDVSHSFGIENYSNYQGV
                     DILTSSLSKACGAYGGVILSSNDVKDMLINHGRPLIYSSSLPIYNLYFIKRNIEKLIN
                     ADDRRTKLNSLSKYFNQKLKALNVNYNSSNSPIKFIEFDDIEAAENIHQTLLKHHVFT
                     SYLRYPTVTKPMLRISLSYFHTEQDIDRLFEILHQED"
     gene            40860..41552
                     /locus_tag="O7798_000405"
     CDS             40860..41552
                     /locus_tag="O7798_000405"
                     /EC_number="6.2.1.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501174.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="6-carboxyhexanoate--CoA ligase"
                     /protein_id="HDC2862683.1"
                     /translation="MYSIKMRSSNQDVHISGAETICEFDKIEQTVQRFYNKGFFHENG
                     QPDFLNIKIQKIMEPIQQIKALQIIEDDKANLQHLTQECGVTEQALNQGMTYIKNETV
                     YTGAIILSAISGKRLDSFGQRGIRATHFSFEDINNKGDLNERVTDALAIASCINAHPY
                     VKGELCVSDDLTYTTGYFAAAKIGYHRLFDIKPVNTRYGGRIIFVDDCIDLNHYISFL
                     ESTPKQVVYETV"
     gene            41563..42030
                     /locus_tag="O7798_000406"
     CDS             41563..42030
                     /locus_tag="O7798_000406"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501173.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="QueT transporter family protein"
                     /protein_id="HDC2862684.1"
                     /translation="MTSKDITQISVIAAILTILAVLKIPSIIPGLDFQLSAPAALLIL
                     AFFGIKKYFLGGLLSSLLLLVFGVFNPINVIISIIFRVIAIAVVYLLKINVLSLVLAS
                     VLGSLVSRLLLSIILNLPVWVVLLNAIPGVIFTLIVAIPLYLTLRKRMAVLLR"
     gene            complement(42082..43059)
                     /gene="hlgB"
                     /locus_tag="O7798_000407"
     CDS             complement(42082..43059)
                     /gene="hlgB"
                     /locus_tag="O7798_000407"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501172.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bi-component gamma-hemolysin HlgAB/HlgCB subunit
                     B"
                     /protein_id="HDC2862685.1"
                     /translation="MKMNKLVKSSVATSMALLLLSGTANAEGKITPVSVKKVDDKVTL
                     YKTTATADSDKFKISQILTFNFIKDKSYDKDTLVLKATGNINSGFVKPNPNDYDFSKL
                     YWGAKYNVSISSQSNDSVNVVDYAPKNQNEEFQVQNTLGYTFGGDISISNGLSGGLNG
                     NTAFSETINYKQESYRTTLSRNTNYKNVGWGVEAHKIMNNGWGPYGRDSFHPTYGNEL
                     FLAGRQSSAYAGQNFIAQHQMPLLSRSNFNPEFLSVLSHRQDGAKKSKITVTYQREMD
                     LYQIRWNGFYWAGANYKNFKTRTFKSTYEIDWENHKVKLLDTKETENNK"
     gene            complement(43061..44008)
                     /gene="hlgC"
                     /locus_tag="O7798_000408"
     CDS             complement(43061..44008)
                     /gene="hlgC"
                     /locus_tag="O7798_000408"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501171.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bi-component gamma-hemolysin HlgCB subunit C"
                     /protein_id="HDC2862686.1"
                     /translation="MLKNKILTTTLSVSLLAPLANPLLENAKAANDTEDIGKGSDIEI
                     IKRTEDKTSNKWGVTQNIQFDFVKDKKYNKDALILKMQGFISSRTTYYNYKKTNHVKA
                     MRWPFQYNIGLKTNDKYVSLINYLPKNKIESTNVSQTLGYNIGGNFQSAPSLGGNGSF
                     NYSKSISYTQQNYVSEVEQQNSKSVLWGVKANSFATESGQKSAFDSDLFVGYKPHSKD
                     PRDYFVPDSELPPLVQSGFNPSFIATVSHEKGSSDTSEFEITYGRNMDVTHAIKRSTH
                     YGNSYLDGHRVHNAFVNRNYTVKYEVNWKTHEIKVKGQN"
BASE COUNT        14970 a         6395 c         8245 g        14587 t
ORIGIN      
        1 gtgtgttcca ctgctgattt ctttttgagc attataggcg gtatgttgga agaaaagaac
       61 aaaagtttgt gaacgatagc atataggtat taagaatacg atgaactcgt tggtaatatt
      121 gacgtactca agtgcgtacg ctataattag cgtaacagaa aacaaaggag ggtttatatg
      181 attatcacta gccctacaga agcgagaaaa gatttttatc aattactaaa aaatgttaat
      241 aataatcacg aaccaattta tattagtggc aataatgccg aaaataatgc tgtgattata
      301 ggtttagaag attggaaaag tatacaagag acaatatatc ttgaatctac tggtacaatg
      361 gacaaagtaa gagaaagaga aaaagataat agtggtacaa caaatataga tgatattgat
      421 tgggataatc tttaatgagc aattacacgg ttaagattaa aaattcagcg aaatcagatt
      481 taaagaaaat aaaacattct tatttaaaga agtcattttt agaaattgtt gagactttaa
      541 aaaatgatcc gtataaaata acacaatctt ttgaaaaatt agagcctaaa tatttagagc
      601 gatattcaag aagaattaac catcagcaca gggtcgtcta taccgtagat gatcgaaata
      661 aagaagtatt aatactatcg gcatggtcac attatgatta atgaatattc aatatctgaa
      721 taactttaat gataagttaa ttaaagaaac tagtatttaa gtgtagggaa aatagcgacg
      781 ttaatgcgtt gttatctcta cactttttaa ttttataata gcgcaagact aaacagattg
      841 aaattagtaa caataaaaga ataacgtatt ataataagga attttaaatt gtgacttttt
      901 cggaatatta aattttagaa atatgaggtt tttaagcgga ttcctcacaa aattttaaaa
      961 atatttaagc ctgaaaatga taaagcggta gggaacgttt ttctgaaagt tagtgataca
     1021 atagttttaa gttgaaatac aggaggatga ataacatgaa tcagtcagtc aaattactta
     1081 aacatttaac agatgtaaac ggcattgctg gttatgaaat gcaagttaaa gaagcaatgc
     1141 gtaactatat agagcctgtc agtgatcaaa ttattgaaga taacttgggt ggcatttttg
     1201 gaaagaaaaa tgctgagaat ggtcaatact caattatgat ttctggtcat atggatgaag
     1261 ttggttttat ggtaacaaag attgataaac atggttttat ttcatttacg ccagttggtg
     1321 gatggtggaa tcaagtcatg ctatctcaaa aagtaacgat tacaacagat tcgggcaaag
     1381 aaattagagg tatcatcggt tctaaaccgc cacatgtctt aacgcctgaa gaacgtaaaa
     1441 agccaatgga aatcaaaaat atgtttatag atattggtgt tagtagcaag gaagaagctg
     1501 aagaagctgg cgttgaagta ggcaatatgg ttacgccata tagtgaattt gaagtgcttg
     1561 caaatgataa atatttaact gcgaaagcat ttgataatcg ctatggctgt gcattagcta
     1621 ttgaggtatt aaaacgttta aaagatgaaa atattggcat taacttatac agtggtgcca
     1681 cagtgcaaga agaagttggt ttgcgtggtg cgaaagtggc agcgaatacg attaaaccag
     1741 acttggcgat agctgtcgat gtaggtattg cttatgatac cccaggtatg tcaggtcaaa
     1801 cgagcgatag taaactaggc ggtggtccag ttgtcattat gatggatgct acaagtattg
     1861 ctcaccaagg tttgcgaaag catattaaag atgtagctaa ggaacataac atcgaagtac
     1921 aatgggatac gacaccaggt ggaggtacag atgcgggaag tattcatgtc gcaaatgaag
     1981 gtattccaac gatgacaatc ggtgttacgc tgcgatacat gcattctaat gtttcagtgc
     2041 tcaatgtaga tgattatgaa aattctatcc gtcttgttac tgaaattgtc cgttcattga
     2101 atgatgaaag ttataaaaat atcatgtggt aatcaaatcc ataaataata aagaatcctt
     2161 ttaatatggt aggttgttaa acaattgtct aattttaatt cttagtcatt agacagtatc
     2221 catgttaata ggattttttg tttttaattt aaatgctgaa aatcaattat gcctaaattt
     2281 tgatattaca agaaaatgat tttttcttaa atgtaattgc actaaaaacc aaaaaaacgg
     2341 gaataatata cctgatatat tacatgagga gcggtgcaaa tgttgttaga aattaaagat
     2401 ttagtgtata aagcgagcga tagaatcata ctagatcata tcagtctaaa agtagataaa
     2461 ggcgagagta ttgccattat aggtccatca ggtagtggta aaagtacatt tcaaaagcaa
     2521 atatgtaatt tgtttagtcc aactagtgga gaactttatt ttaaaggtaa accctataat
     2581 gattatgacc cggaagaatt gcgtcaacga atcagttatt tgatgcagca aagtgacttg
     2641 tttggtgaaa cgattgaaga taacatgata ttcccatcac ttgcacgtaa tgataaattt
     2701 gatagaaaac gtgcaaagca attaattaaa gatgtcggtt tgggacatta tcaattaagt
     2761 tcggaagtgg aaaatatgtc gggtggtgag cggcaaagaa ttgctatagc gcgccaactg
     2821 atgtatacac cggatattct tttattagat gaatcgacca gtgcattaga cgttaataat
     2881 aaagaaaaga tagaaaatat catttttaaa ttagcagatc aaggcgtggc aattatgtgg
     2941 attacccaca gcgatgacca aagtatgcga cactttcaaa agcgtataac aattgttgat
     3001 ggtcaaattt ctaatacaga ggagttgaat caacatgagt aatacggcac ttggattgac
     3061 ggcattgctt ttagtcattc cgattatcat ttcatataaa gaaggtttac atattattaa
     3121 agatttaatt gttgcgacat tacgagcagt tgtgcaatta atcattttgg gatttttgct
     3181 gcattatatt tttaaaataa acgataaatg gctgcttatt ttatgtgtat tggtcattat
     3241 tattaatgca tcatggaata caattagtcg agcatcacca gtgatgcatc atgtgttttg
     3301 gatatcattt ctagctatct tcattggaac ggcattaccg cttgcaggta ctattgcgac
     3361 aggggccatt caatttaccg caaatgaagt tatacctatc ggcggcatgc ttgcaaataa
     3421 tggcttgatt gcaattaatt tagcttacca gaatttagat cgtgcattcg tacaagatgg
     3481 tactaatatt gaatctaaat tatcacttgc agctacacct aaattggctt ctaaaggtgc
     3541 aatacgtgaa agtattcgtt tagctatagt gccaactatt gattcggtta aaacatatgg
     3601 gcttgtgtcg attcctggta tgatgacagg cttaattatt ggtggcgtac cacctttaca
     3661 agcgattaaa tttcaattgt tagtcgtgtt tattcataca actgcgacca ttatgtctgc
     3721 tttgattgcg acatatttaa gctatggtca atttttcaat gcaagacatc aattagtagc
     3781 acgaaatact gatgttaaga gtgaatcatg atagatttta ctgcatcaga tttaggcatt
     3841 agttttaatt ggaaatgaag tgacgcgcac atatagtatc gctattcatt agcgcagcga
     3901 aaatattcat aaaggcacgc atactttgta gtcagttatc tgttctgaca tataaagcgt
     3961 gcgtgctttt ttggagttat tgttgaaact gaagtaatta tacataatta ttaaatgaca
     4021 tacttgtgtt aatttttcaa atactgaaaa acaatttcaa taattttcca attaagcaca
     4081 gaaaattaaa gcaaaatatt atataataga acggttatat ataaaattgt gttgcacaca
     4141 ttttttaata aatcattatt ctaagggaaa tgaatatcgg aaattttgtt tgaaaggagt
     4201 tttaaattgt caatcatgcg actatttaca ttcattttaa gtatttttat cgtaggaatg
     4261 gttgaaatga tggttgcagg aattatgaac ttgatgagtc aggacttaca tgtatcagaa
     4321 gctgtcgttg gtcaattagt gacaatgtac gctttaacat ttgcgatatg tggacctatt
     4381 ctggttaaat taacgaaccg tttttcatca aggcctgtat tattatggac attacttata
     4441 tttatcattg gtaatggcat tattgctgta gcgccaaatt tttcaatatt agtagttggt
     4501 agaattatct catctgcagc agcagcacta attatcgtaa aagtattagc tattacagcg
     4561 atgttatcag cacctaaaaa tcgtggtaaa atgattggac ttgtctatac agggtttagt
     4621 ggtgctaatg tttttggtgt accaattgga acggttatcg gcgatttagt aggttggcgc
     4681 tatacatttc tattcttaat tattgtgagt attattgttg gcttcttgat gatgatctat
     4741 ttaccgaagg atcaggaaat acaacgaggc cctgtgaatc atgagacacc atctcatgaa
     4801 aatcatgtta cttcgaaaat attaagacct gctgaagtag caaaatattt aattattacg
     4861 tttttagtat tgattgcaaa ctcagtgaca ttcgtcttta taaatccact tattttatct
     4921 aatggtcatg atatgtcatt cgtttcatta gcacttctag taaatggaat cgctggcgtt
     4981 attggaacat cattaggtgg tatattctcc gataaaatta caagtaagcg ttggttaatg
     5041 atttctgttt ctatttttat cgtcatgatg ttacttatga atttaatctt acctggttca
     5101 ggtctattgt tagcaggact atttatttgg aatatcatgc aatggagtac taatccagca
     5161 gtgcaaagcg gtgtgattca acatgttgaa ggcgacacaa gccaagtaat gagttggaac
     5221 atgtctagtt taaacgctgg tattggtgtt ggaggcatta ttggaggctt ggtcatgaca
     5281 catgtttctg ttcaagctat cacatatacg agtgccatca ttggcgcatt aggattaatc
     5341 gttgttttca cattgaaaaa taatcattat gctaaaacat ttaaatcatc ataattctca
     5401 tatgaaaagc acgcctgcta tcaaattcag gtgtgctttt ttagatgcga taacgttatt
     5461 gatatgtgcg ataatagcga cgttcattat gatacatcgg ccaaggcatt ttaccgcttt
     5521 tagcaaaatt agctaaatca ttttgcattt gtcgacttaa aaatttaagg tgagcagttg
     5581 ttggatattg atgtgctgct aatatttgta agtttccgaa ccaaaatacc atatctagaa
     5641 tatggtaagc actgcgatag tgtgcgctag aagtatcatg ccatgcaaat tcagcaagcc
     5701 atagttgtgc gtttgaatct tgtatattga gttgttgtaa aaattgcttc atcggctgtt
     5761 tgaaataaca atgtgtaatc gctaaagatt gttgcttcgc cgtctgaaca tcttcgtatt
     5821 ttaaaggaat atcatttaat tccataatgt cgataaagcg ttgcggcgat aattttttct
     5881 gttcactagt aatataaata tcgccttcat cttttgtata acatgcaaaa attggtttcg
     5941 ttgttggata attattttgt atataatctg ttttaatagg cgcatatatt aaatcaagcc
     6001 ctttagaagg tcctcgagat tgttttagct tcgccatcag cataagaata tcatttgtcg
     6061 ataatgatgt aacatcatct gtatctaaat aatcgagcat cattttttgg aaatgttgtg
     6121 ctttattgcg tgcactctca agggtgtcta atcgtagtgc gccacttagt agaacgactt
     6181 tatggaagta tggctcaatg tcaggtattt taagtaaagt caaaatgctc atactgcctg
     6241 cagactgccc cattaaagta atgttattag cgtcgccacc gaaggattca ataaattgat
     6301 gcacccattt tatgacattg atttgatctg aaaggccatt attggaatga aaatctttat
     6361 taaaatatga ccagtctaaa tatcctaatg cgcctaaacg ataattgcat gtaataacga
     6421 taatgtcgtt attttgtact aaatgtgccg gttgatagag ttcggctgta ccatgaccat
     6481 tttcaaaact accaccataa aaataaatga tgacaggttt cttcgtctga tcattatgtt
     6541 gtttccaaat atttagatat aaacagtctt catgttcagt aaaagttgta gattgtgagg
     6601 agaaaaaatc ttctaatttg ttgtctggtt gcggtgggat gggttgtatt tcagttgcat
     6661 caattggctc tgaccattgt gtttttaacg tagaatgttt aaagcgattg tcatgaactg
     6721 gtggttctgc ataaggaatg cctaagaaga tatctaaacc atcttgtgta ataccatgaa
     6781 tttgaccacc tgtagtatta atcttcatat ttattaacct cctttatcat ccccaattta
     6841 atcataccac ggtctataga tgataggtga caagtataac aagacaattt tgtgactgaa
     6901 tcagacgagc ttgatatctg ttttaactca aaccattttc agcattatat gatgtacttc
     6961 tacgggagtg ggacagaaat gataaagagc cacaaatgat ttattatgta gtggttctta
     7021 tacattagcc acagctaatg tgtacttaaa aatatgaata catgagtaaa actcatgcat
     7081 aagaaatact aatttctata gaaaaagtat ttctttatcg tcgtcccacc ccaacttgca
     7141 ttgcctgtag aatttctttt cgaaattctc tgtgttgggg cccctgacta gaatcgaaaa
     7201 aagcttgtta caagcgcatt ttcgttcagt caactactgc caatataact tcgtagagca
     7261 tagaacattg atttatgtcc cagcctgatc atcatcttgt tatgttagtt atttataacc
     7321 gattttcaaa ataaaaaacc aaccaagatg ttgaaatcaa tggttggtta atgtgtgtgt
     7381 gttgaaatca tatatggcac tgtattttaa aatatttaat gagatgactt tgattcatta
     7441 tttagtgact cacgcatctt cgtattgatt cgtgttgcgc gacggaaata gacgctttca
     7501 aatgaactcg ttgtaccgat gtaatagaag ataagtgcca caataataat aacgataaag
     7561 tcaaatggat agtgaatcat atttaagcct ttaaattctt tgcttcctat aaatgacagt
     7621 attgatagca cgattaaata tacaataatc cataagctac caccaatttg tttctttgta
     7681 ttacgccaat tcatacgata ttcatagaag aagtagattg gtaatccaag tataatgatt
     7741 aaaataactt cagccgttgt tggccacatt gcccaatata tagctaatga agctaataca
     7801 aatgataatg gtgacattac ttttaaaatt tttgctctaa atggacgagt cattgttggt
     7861 cccatttttc ttaatgcaat cactgtcgtt gggccagtta aataggctac taaagttgca
     7921 gtagaaataa ctgctgctag cgtaccccaa tctctaaata atgtaaccat aatcatacta
     7981 atgatggcat taaagatgat tgctacacgt gggatatgat atttttcatt catcttccca
     8041 agaaatttag ggatatgtcc atttttctcc attgctcgta aaactcgacc tgtaacggcg
     8101 acaaatgaca cgccagtacc gaatggtgat acaaaagctt caatgtatag taaaattgcg
     8161 agccaattaa ttcctaataa gatagctaaa tcagcaaatg gtgaattgaa gttgatgcca
     8221 ttccatccac tatgttgtaa cattgattga ggcatagaag tgataaacgt actttgtaaa
     8281 atgatgtaca acactgcact gattgacagt gagatagcga tgcctcttgc gatatttttt
     8341 tcaggatttt taatttctga acccatatta ataattgtct ggaatgaatt gaatgaaaaa
     8401 ataatccctg atgctgttgt tgcagcaaaa atcggtgcac ttccgtaagg cataaatgtg
     8461 cttgccgaat ggccgtaatt tgaagtgtcg aatcctgata gcatcaacat gatgatggtt
     8521 aacatgggta cgcctaattt aaatacagaa attaaactcg taaatgatgt taaaagtttt
     8581 acggaccaat agtttaataa tgaaaaaata acaatgatga gatatacagc tagcaatccg
     8641 tatgtgctaa tagagccatt ttccattaaa tatctcattg gtttcgccca atgccacggc
     8701 caagaactca tatattgaac agctgacaca gcttcgatag gtattattgt caccaaagac
     8761 acccaattcg cccaagcagc aataaagcct aataatgagc catgtgtata ctgggcatag
     8821 ttactcatgc cacctgattg aggaaacatt gtgccgattt caatgtagtt ataggcaatg
     8881 gttccaatga ctaggaatcc aagaacccat gatatgattg ctgctggtcc agctattgat
     8941 gatgcttccc acgcaccaaa tagccaacca gatcctatta aagagcctaa ccctaataag
     9001 actaattggg atagattgat tttgtcgttg tgcaattgct tgtctttatt cataaatact
     9061 ccttcgttat tgccaaaaat acaaaaaata atatgcgaca attatacgct tattataata
     9121 atagtcaaat gcattttttg taagaacgca aaagcatttg taaaattagt tttttataaa
     9181 attaggatat ataatacaat gtgtattgaa aaacaaaatg gaagtgatga ctatgagtga
     9241 gaaacaatca aatgaacaag ttgaagcatt tttaaataaa gagagtcaat ggcaagaaga
     9301 atataaatat ttgagagcgt taatctttaa tgaaacagaa ttagaggaag cgtataaatg
     9361 gatgcatcct tgttacacgt tgaataataa aaatgtagta cttatccatg gcttcaaaaa
     9421 ttatgttgca ctattatttc ataaaggtgc cattttggag gataaatatc atacactcat
     9481 tcaacagact gaaaaggtgc aagcagctcg tcagttacga tttgaaaatt taacagagat
     9541 tcaagcacgt accgaagaaa ttaaatatta tctagccgaa gcaattaaag ctgaaaaagt
     9601 tggtaaaaaa gttgaaatga agaaaacaga ggaatatgtt attcctaaag agttagaagc
     9661 taagttcgaa gaaatgccac agttagagtc ttcattttat aaattaacgc caggcagaca
     9721 acatcaatat atatatcata ttggacaagc taaacgcagt gaaacaagac aaaagcgtgt
     9781 tgaaaagtat attaaccaaa tactagaagg taaagggatg catgataagt aattaatgag
     9841 taaagcatac cggttataca acaacataca agatgacacg aaacaaccaa tggctcatgc
     9901 tgttggttgt ttttttaggt gtgtctgtca tgggcaacac tttgacgttg gaattccgtt
     9961 acaggcttgg gagtagaaaa tgttagcaaa aggcaagggt gtctacaatg aatgatgaag
    10021 atattaaaat ataaggatga ctttgtgagt ggcggatggg cggttgtccg tctgtaacaa
    10081 tggatgcgtg tgcattatta caaaaattcg acttttgtaa taatatttca cattttcgac
    10141 acttttttgc tataaaacaa ccaattgagc gataataaat tcgcttttaa aaaatatgag
    10201 ttatctattt agttgccaaa gataaaataa taatgtttaa taacatcata tagagtatgt
    10261 tagttttaaa tgtcgaatat acgaatgtgc aaacaaagta atcggtagaa attcaacata
    10321 catagcgccg tttactgtta agtattcaca ttacagatga aaaatataaa attctacata
    10381 atcaagacca tgatgtgtac ttgtttaact tatgactcta tttgtttaac aattgcgata
    10441 atggtctttt tattttatgc gtatcattcg tcatattttt tatgaggaag gagaaatgat
    10501 tatgttaagt attaagcatt taacgaaaat ttattctggt aataaaaagg cagtagatga
    10561 catctcttta gatattcaat ctggggaatt tatcgcattt attggaacca gtggaagtgg
    10621 caaaacgact gctttaagaa tgataaaccg tatgattgaa gcgacagaag gacaaattga
    10681 aattgatggt aaagatgttc ggagtatgaa tcctgtcgaa ttgcgtagaa atattggcta
    10741 tgttattcaa caaattggct taatgcctca tatgacgatt aaagagaata ttgtgttggt
    10801 acccaaattg ttgaaatgga ctaaagagga aaaggataaa cgtgcaaagg aattaattaa
    10861 acttgtggat ttaccggagt catttttaga gcgttatcca gcagaactat caggtgggca
    10921 acaacaacgt atcggtgttg taagagcact tgcggccgaa caagatatta ttttaatgga
    10981 tgaacctttt ggtgcattgg atcctattac gagagatacg ttacaagatt tagttaaaac
    11041 gttacaacga aaattaggca agacgtttat ctttgtaaca catgatatgg atgaagcgat
    11101 taaattagca gacaaaattt gtattatgtc agaaggtaag gtggtgcaat ttgatacgcc
    11161 agacaatatt ttaagacatc ccgcaaatga ttttgtacgt gattttatag gacaaaatag
    11221 actgattcaa gaccgtccca atgacaagac tgtagaaggt gtaatgatta aaccaatcac
    11281 gatacaagca gaagcaacac tgaatgacgc cgttcatatt atgagacaaa aacgtgttga
    11341 tactattttt gtagtagata gtaataacca tttactaggt ttcttagaca ttgaagatat
    11401 aaatcagggt atacgtggac acaaaagttt acgagacacc atgcaacaac atatttatac
    11461 cgttcaaatt gattctaaat tacaagattc tgtacgtacg attttaaaaa gaaacgttag
    11521 gaatgtacct gtcgtagatg atcaacagcg tttagtagga ctgattacgc gtgccaatgt
    11581 tgttgatatt gtatatgaca cgatttgggg cgatagtgag gatacagtgc aaacagaaca
    11641 tgtgggggaa gacactgcgt cctcaaaagt gcatgagcaa cacactacta atgtcaaagt
    11701 acgtgacata ggagatgata aatcatgatt gagttcctac atgaacatgg tggacagttg
    11761 atgtcgaaaa cactggaaca tttctatatt tctatagtgg cattattact tgccatcatt
    11821 gttgcagtac ctataggcat tttattatca aaaacaaagc gaactgccaa tattgtatta
    11881 actgtggcag gtgtcttaca aactattcca acactagctg tacttgctat tatgataccg
    11941 atttttggtg ttggtaaaac gcctgcaatt gtagcgctat ttatttatgt attattacct
    12001 attttaaata acacggtact cggtgttcaa aatattgata gcaacattaa agaagctgga
    12061 aaaagtatgg gaatgacaca atttcaattg atgaaggatg ttgaattgcc gttagcattg
    12121 ccgcttatca ttggtggcat tcgtttgtca tctgtgtatg taattagttg ggctacactt
    12181 gcaagttatg taggtgcggg tggattaggt gatttcattt tcaatggttt aaatttatat
    12241 gatccactga tgattgtaac tgcaacggta ctcgttactg cactagcatt aggtgttgat
    12301 gccttattag ctttagttga aaaatgggta gttcccaaag gcttaaaagt atctggataa
    12361 ttaggaggct aagataatga agaaaattaa atatatactt gtcgtgtttg tcttatcgct
    12421 taccgtatta tctggatgta gtttgcccgg actaggtagt aagagcacga aaaatgatgt
    12481 caaaattaca gcattatcaa caagcgaatc gcaaattatt tcacatatgt tacggttgtt
    12541 aatagagcat gatacacacg gtaagataaa gccaacatta gtaaataatt tagggtcaag
    12601 tacgattcaa cataatgcct taattaatgg ggatgctaat atatcaggtg ttagatataa
    12661 tggcacagat ttaacgggag ctttgaagga agcaccaatt aaaaatccta agaaagcaat
    12721 gatagcaaca caacaaggat ttaaaaagaa atttgatcaa acgttttttg attcgtatgg
    12781 ttttgcgaat acgtatgcat tcatggtaac gaaggaaacc gctaaaaaat atcatttaga
    12841 gacagtttca gatttagcaa agcatagtaa agatttacgt ttaggtatgg atagttcatg
    12901 gatgaatcgt aaaggcgatg gctatgaagg atttaaaaaa gagtatggtt ttgactttgg
    12961 tacagtgaga ccaatgcaaa taggtctagt ctacgacgca ttaaactcag agaagttaga
    13021 cgttgcatta ggttattcta cagatggtcg aattgcggcg tatgatttga aagtacttaa
    13081 agatgataaa caatttttcc caccttatgc tgcgagtgct gttgcaacaa atgaattatt
    13141 acggcaacac ccagaactta aaacgacgat taataagttg acaggaaaga tttcgacttc
    13201 agagatgcaa cgcttgaatt atgaagcgga tggtaaaggt aaagaacctg ctgtcgtcgc
    13261 agaagaattt ttgaaaaaac accactattt tgataaacag aaaggtggtc ataagtaatg
    13321 gaaggtaatt tattacagca attattcaat tattatgtta cgaactttgg ttatctatgg
    13381 gatttatttt tcaaacactt attaatgtct gtctatggtg tgctgtttgc agctttaatt
    13441 ggtattccat tgggaatctt gcttgcaaga tacacaaaac tttctggatt tgtaattaca
    13501 attgcaaata taattcaaac agttccagtc attgcaatgt tagctatttt aatgttagtc
    13561 atgggcttag gttcagaaac agtagtttta acagtgtttt tatatgcgtt acttccaatt
    13621 ataaaaaaca cttatactgg tatagctagt gttgatgcga atattaagga tgctggcaaa
    13681 ggtatgggaa tgacacgcaa tcaagtgcta cgaatgattg aattaccgtt atctgtttcg
    13741 gttattatcg gtggcattcg tattgccttg gttgttgcga taggtgttgt tgccgttgga
    13801 tcatttatag gagcacctac gcttggtgac attgtgattc gtggtacaaa tgcgacggat
    13861 ggcacaacgt ttattttagc aggtgcgatt ccgattgcta tcattgcaat cgtcattgat
    13921 gtactattaa gatttttaga aaaacgatta gacccaacaa cacgacatcg taaaaatcaa
    13981 tctaatcatc ggccgcaaag tattaatatg taatagtaga agatgtttat aatttagcga
    14041 tttcgtttca tgatttataa aaaatgaggc tactcaagga gctcaaataa tctttgagta
    14101 gcctttttat aggttgtgtt tgtatgcgtt tacactaaaa tagcaattat tatcatgaaa
    14161 gtttttggat aaaaagcgtt aattattgta aaaatactaa aaaatgagat gttttattta
    14221 taattttctg caaatttatg atattgtttc ttaatatatc atattaaaaa tttgtttttc
    14281 ttaaacatag gaggcttatc taattcatgg acacatcaaa acaatttaga ggtgacaacc
    14341 gattgctttt gggtatcgtt ttaggggtta ttaccttttg gctattcgcg cagtcacttg
    14401 ttaatcttgt tgtcccatta caatcaacat atagtagtga cgttggaacg ataaatatcg
    14461 ctgttagctt atctgcctta tttgctggtt tgtttatcgt aggtgctggt gatgttgctg
    14521 ataaatttgg tcgcgtcaaa attacttatg taggattgat attaaatgtt gtaggttcat
    14581 tactcatcat cattacacct ttgccagcat ttttaattat aggtagaata attcaaggtt
    14641 tgtctgcagc atgtattatg ccatcaacac ttgctattat taacgaatat tatattggta
    14701 caagaagaca acgtgcctta agctattggt ctattggttc ttggggtggt agtggtattt
    14761 gtacgttgtt tggtggctta atggctacat atataggttg gcgttcaata tttgttgttt
    14821 caattctatt aacattatta gcaatgtact taatcaaaca tgcacctgag actaaagcag
    14881 aaccaatcaa aggtatgaaa gcagaagcta aaaagtttga cgttattggt ttagtcattt
    14941 tagtagtgac gatgttaagt ttaaatgtaa tcatcacaca gacgtctcat tttggtttag
    15001 tttcaccgtt aattctaggt ttaattgttg tgtttatctg ttcattagtt ggttttgtat
    15061 attacgaaaa taaaataaag catccacttg ttgatttttc aatttttaaa aatagaggat
    15121 acagtggtgc aactatttca aacttcttat taaatggtgt agcaggtggt gcacttatcg
    15181 ttattaacac gtattatcaa caacaattag gatttaattc ttcgcaaacg ggttatattt
    15241 cattaacgta tttaataaca gtgttgtcaa tgattcgtgt aggtgaaaag attttatctc
    15301 aacatggtcc gaagcgccca ctattactag gaagtggctt tacagtgatt gggttaatct
    15361 tattgtcgtt aacattttta ccagaagtgt ggtatatcat atctagtata gttggatatt
    15421 tattgtttgg tactggttta ggattatatg ctacaccatc aactgataca gcagttgcta
    15481 gtgcgccaga tgataagtcg ggtgttgctt caggtgtgta taaaatggcg tcatcattag
    15541 gaaatgcatt tggagtagca gtatctggta cggtttatac tgtgttagca gctaatttaa
    15601 atttgaactt aggtggtttc acaggtatga tgtttaatgc cttgctagca attgttgcat
    15661 ttttagtcat tttactatta gttcctaaaa atcaaacgaa tttgtaaaac tgaaatgaaa
    15721 gcaagttatt atgtagggat tttaaaggaa attttgtgaa agtaagttta tcatacacac
    15781 ttaatgttgc gtattgacgt ttaatgttag gtgtgttctt ttatagacga taaaagctgt
    15841 gtgcatatta agcgaatgat tttcaaattg acgctaatat gcgaaagtag tatttttaaa
    15901 atgaacaaca acgatgaaga ggggtttata ggatgaaaat tgcaattgct ggatcgggtg
    15961 cattaggtag tggctttggt gccaaactat ttcaagcagg atatgatgtc acacttattg
    16021 acggatatac atctcatgtt gaagcggtta agcaacatgg attaaatata acgattaatg
    16081 gagaggcatt cgagttaaac attccgatgt atcattttaa tgatcaaccg gacgaaagca
    16141 tttacgatgt tgtctttcta tttccaaagt ctatgcaatt aaaagaagtg atggaagata
    16201 tgaagccaca tattgataat gaaacgatcg tcgtatgtac gatgaatggt ctgaagcatg
    16261 aagaagtcat tgcgcagtat gttgctcaat cacaaattgt cagaggtgtt acgacttgga
    16321 cggcaggtct tgaaagccct ggacacagtc atttacttgg tagtggacca gttgaaatag
    16381 gtgaactagt ggatgaaggt aaagaaaatg ttataaaagt tgctgattta cttaacgaag
    16441 cggaattgaa tggtgtcatt agtaaagatt tataccaatc gatttggaaa aagatttgtg
    16501 ttaatggtac ggcaaatgca ttaagcacag tgttggagtg taatatggca tcgctgaatg
    16561 aaagtagtta tgcgaagtgt ttgatttata aattaacgca agaaatagtg catgtagcga
    16621 cgattgataa tgttcattta aatgttgatg aagtatttga atatttagtt gatttaaatg
    16681 aaaaagttgg tgcgcattat ccatccatgt atcaagattt aattgttaat aatagaaaaa
    16741 ctgaaattga ttatattaat ggcgcagttg caacattagg taaacaacgt catattgaag
    16801 cgccagtcaa tcgctttatt actgatttaa ttcatactaa agaaagtcag cgacacgcac
    16861 aggattaatt ggtgttttag gtatgattac aaggaaatga caatcacgtg atattacggt
    16921 cattattaag attgaaatgt aataaataaa gaacagcagt aaggtacttt caaattgaaa
    16981 tgatcttggt gctgtttttc ttgattgatc ttcgtcataa ttcagatttg tcataggtct
    17041 acgacatact attagtattt actagacagt ttttacgacg acactttgaa aaattttgag
    17101 gcaaatcatt tggaagtctc acgtgaattt tgtaaactca tcaagcaagt aattatatta
    17161 aaaagacaaa tagagaaaag gtgtttataa tgagtaaaat ttttgtaact ggtgcaacgg
    17221 gccttattgg cattaaatta gttcaaagac taaaagaaga ggggcatgag gttgctggtt
    17281 ttactacatc tgagaatggt caacaaaagc tagctgctgt taatgtaaaa gcatatattg
    17341 gtgatatatt aaaagctgat actattgatc aagcgttagc agattttaaa ccagaaatca
    17401 ttatcaatca aattacggat ttaaaaaatg ttgatatggc agcaaatacg aaagtacgta
    17461 ttgaaggttc taaaaaccta attgatgcgg cgaaaaagca tgacgttaag aaagtaattg
    17521 cccaaagtat tgcctttatg tatgaacctg gcgaaggatt agcaaatgag gaaacttcac
    17581 ttgattttaa ctcaactggc gatagaaaag taacggttga tggtgtggtt ggtttagaag
    17641 aagaaacggc tcgtatggat gaatacgttg ttttacgttt tggctggtta tatggcccag
    17701 gtacttggta cggaaaagat ggcatgattt ataatcaatt tatggatggt caagtgacac
    17761 tttcagatgg cgtaacatca tttgtgcatc ttgatgatgc agttgaaaca tctattcaag
    17821 ctattcattt tgaaaatggt atctataatg tagcagatga tgcacctgtt aaaggttctg
    17881 aatttgcaga atggtataaa gaacaacttg gtgttgaacc aaatattgat attcaacctg
    17941 cgcaaccatt tgaacgtggc gtaagcaatg agaagtttaa agcgcaaggt ggtactctga
    18001 tttatcaaac ttggaaagat ggcatgaatc caattaaata ataatttatc cgtttaatat
    18061 acaaagaata aagacttggt cgaatcgtgg atgatatatt atcaaacgca cggctcgaac
    18121 aagtcttttt tattatgtct tcgttatctt tgtatgaagg aataacagaa ttacaattaa
    18181 tgtactgaat aatgcaatta atgttgtgat tagtgctaat ttaatttcta ttggtagcca
    18241 agtcagtaca aaagaccaat tattgctacc gagaatgaga tatggtaatg catataatat
    18301 gagcgctaaa gcgatacata tacataatga taaccaactc aatacagcaa tccgttttga
    18361 tctacgcaaa agaatttgac catggcgcat ttgccaagca cgataagctg agaatataaa
    18421 tgctaataaa ataagtgttg tcatcaaaac ggtaacaata ttaaattgat ctttatattg
    18481 attgagcata gacgcaaccg tcgaatatcg cttgtgattt acaatttgtg tattaagatg
    18541 ctcaactaat ttgggtacat attccgaatt tagatttgca agtacaacaa ttccataatt
    18601 ttgttttgga tttagtaaaa taaatgatga aaagttatct agcgttcctg aatgaaacac
    18661 taaatgttca tcattattgg taaaccagcc ggaagcatat gcattggcat taggttcacc
    18721 aattgttgaa gataaatttt tatgtgattg ttgaactaat gatttgtatt tatcaggtgg
    18781 attaagttgg aattttatcc aatgttccaa atcttcagtt gatgtcatca tatatgctga
    18841 tggtgtatcc caaaggttaa attcaggttt agagacgaca ggtgtcgaac cttgtaattc
    18901 atagccaata gcatcatgtt ttgatttgta attggtttgt ttgaatgatg tatgtgtcat
    18961 atgcaaaggc ttgagccatg aatttgtaat atattttgta taggattgct tcgtaacgtt
    19021 ttggataatt aaacctaata aatcatagtt catatttgag tattcaaatt cttctccggg
    19081 cttatgatgt aattcatcac ccataattgc acgggttaca tcatttaaac gattattttt
    19141 gcttgtcaca gaatcttcgc ttgtaatatc actaggtata ccacttgttt gagccaaaag
    19201 ttgcttaatc gtaatagttt cattttgacc attatagttc attttaaaat gaggcacatg
    19261 tttggatacg gcatcattta agtttaatcg accttcttga gctaatttta aaattgcaag
    19321 acctgtgaaa gctttcgtat tagaagcaat ttcatacttt gttgtgggag aagctttgac
    19381 ttttttatca acatcttgat aaccataacc tttatttaaa aaaactttgc cattttttac
    19441 tattaaaatt gatgctccag gaatgtgtcc cttttgtaaa tcatgctcga taattgtatc
    19501 tatttgttgt tgcgaatcat tggttaaccg tgtcttcgta ttgctattta atgttatata
    19561 tatagcaatt gaaatggcga ctaaaatgat aatagaaatg gatagaaaat acagtttttt
    19621 agtagtcata aacgttcctt tttatatgtt aaatttactt aagtgcctaa tgagatttat
    19681 tttattatac cagttctatt gaataaatta attaaagagg tatatttacc attatttttg
    19741 acaccttata tgttaatagg tgtataatta cataaaaaat attaattaac tctctatact
    19801 ttttggaaag ataggcgtat agtgatatcc atcaaaaact ataaaaagga ataggagatt
    19861 atgttcaatc aatttaaaag acttattata gggcaaccta aaaaaaacag agaactaaaa
    19921 gacgaaaaga tatcgaagtt taaagggtta gcgattcttt cgtcggatgc attatcttca
    19981 gtggcttacg gtcccgaaca aatactgatt acactatcag tagtgggtgc agttgcaact
    20041 tggtatactt taccgattgc aggtgctgtt ctgatcttat tagctgcttt aattatgtct
    20101 tataggcaaa ttatttatgc atatcctaaa ggtggcggcg cgtatatggt gtccaagacc
    20161 aatttaggag aaaaatgggg attgcttgca ggaggctcat tattagtcga ttacatactg
    20221 actgtcgctg ttagtatatc atctggtgct gatgcatttg ttgctgcatt cccaagttta
    20281 tatgggcata aagtactgat tgcatgttta cttgtacttt ttattttaat attaaattta
    20341 cgtggtttaa ctgaatctgc caccgtatta tcctatccag tatatctttt cattataggg
    20401 ttagtgatat taatatttat aggtactttc cgtgtggcga caggagatat tcaaccacat
    20461 atgcatgcat cagtaggaac tgcggttcct ggagtaacat tattcttgct attaaaagca
    20521 ttttcatcag gggcttcatc gttaacgggt gttgaagcta tttcaaatgc ggtaaccaat
    20581 tttagagagc caagtgctaa aaatgctgtg aaaacgttaa ttgctatggg ttcaatttta
    20641 gcgtttttat tagttggtat cgttggttta gcatatgttt atggaatttt gccacaaacg
    20701 gaaacgacag ttttatcaca attagctatg caaatatttg gtgataatgc tgccttctat
    20761 tttgtacagg caacgaccgt gatgattttg gtattagcag ccaacactgg atttacagct
    20821 tttccgatgt tagcggcttc aatgtctaaa gataaatata tgcctagaat gtttactgtt
    20881 agaggtgatc gcttaggcta ctctaactcg attattattt taggtgtatt agccattatt
    20941 ttaattattg tatttgatgg tatgactgaa gatttaattc cattgtatgc ggttggtgta
    21001 tttattccat ttacactagc acaattcggt atggttatta aatggattca tgaacgtcct
    21061 aagaattggt taagtaagtt gtctgtgaac ttacttggtg gtatcgtgac atttattgtt
    21121 tttatgattt tactcataac taaatttagc caagtatggc cgatacttat tttcttgccg
    21181 ttcgtggtga ttttcttctt gaaaattaac aaacattatc gagatatcgc agaacaatta
    21241 cgttctgaca ttgatgttct taatgtggac gtggtagatc gtaatttagc aattgtgccg
    21301 ataacaagta ttacaacagc agttgataag tctatttatt acgcacaaat gcttgcgaat
    21361 aatgatgtca tagcagtaca tgtatcattt ggagatgaag atgaaaaagc attccaagag
    21421 aaatggaaac gtcatttccc agatgtaaga ttagttattt tacattcgga atatcgcagt
    21481 attatacgac caatttcacg ttttatcgat aagattaatc gtaaagccaa cgatcaaaac
    21541 tatatgatta cagtagtgat accagaattt attactaaga aacgttggca taatttatta
    21601 cacaatcaaa ctagtttgcg tatgaaattg tatttaattt atcaaaagaa tgttaacgta
    21661 tgtacaattc catttaaact taaaaaatag attctataat caaatcggat tgatgaaagg
    21721 ttatttactt ttcatcaatc tgattttttg atgttgaata taaaaacccc gtacatatga
    21781 gatgataatg actttgtctc atatgtacgg gggtattgtt atgtcttgct taatgtttgg
    21841 actgtaaaga caagacaatt tcgttgtaat tgatattttc tcgaatttga gctgcaacga
    21901 tattgttgat tttatttttg cgaattaatt catctaaaag atgacgttgt aagtacaatg
    21961 cttccaattt gtggttatgg aacatagctt gcggtatgat ttgattgctg ttttcttgac
    22021 gttcttttcg acgttgtgca cgccacttta atgagcgact catatcatag taatgattaa
    22081 tgactaagct aacctcaagt acatttgtac tattttgttc ttcttttaag cgtaaaataa
    22141 tattgtgatt cacaatacgc ataatttttt gaacatcttt gaatgaattt tcaaattctt
    22201 gcttcttaga ttctttattt aaggctttgt agtgcttcat cgctttaagt ctaagccata
    22261 acatcttgaa gaagtttgca aatttttcaa caaatgatgc agtacggtgt gtctctgtta
    22321 attcgacaat attgcggtaa ttattaatat cctgatatgt tgccttacct ttatcaatta
    22381 aacgctcaag tgtagatgtt tcgattactt ttgcaatatc ttctaaacgt ttgagttctt
    22441 ttgtattttg attatcaggt tctgaattta ataaaaataa caattctcca tagtattggt
    22501 ttaatactgg gcgataattt gtatcgtttt tgtctttttt actttcgttt ttaaaatgct
    22561 ggatcacttt ttgaacaatg aaaattttgg cagattgata agtcatacct ttaaaagtag
    22621 tatcttcggc agatggtgta attaaaggta aaacaatttg cgctaagatt aaactaatta
    22681 ataccatgaa agatgcaata aacaataaat cattacggta ttcgaatgct tgtccttttg
    22741 taatgataaa tggtaatgta agtgccattg aaagtgaaat tgtaccgtga ataccacaca
    22801 tggtcataat aaatgcgtaa cgcactcgag aaggtggtgt ttcatgtgaa tcatgttcct
    22861 cgtctagata agattgtata tttttcggga aataaaaatc tttgtaccag aaataaaccc
    22921 aaacaaatcg acatgcataa attgcaatag cgattaatat agtgatcact attaaaaatg
    22981 aaaagttgtc aggctctgtt tggaaaatat ctatgactac agtaggaatc ataaaaccta
    23041 atacaacaaa tacaaaacca tttaaggcat aactaaatgt gttccaaatt tgatggtaat
    23101 tcatttgtag ttccgtttgt gctctaatta aacggtcgcg ttctaaacca tggattagac
    23161 ctgcgattac aactgcaatg atacctgaag catgaacttc ttctgctaaa aagtatacga
    23221 caaaaggagt taataattga ataaaagtta aggtattgtt atcttttaaa cctttattag
    23281 cggttaagtc tatacgtatt ctaacgacaa cgaatccaat aattgcacca ataagtacac
    23341 ctagtattgt tgaaatgata aattgttcaa cagcttggaa taatgaaaag gtaccagtta
    23401 ctaatgcagt aacagcaatt ttaaatgaaa tgatacctgc tgcatcattg agtaaagatt
    23461 caccttctaa aatcgtcata gaacctttag gtaataattt tccgcgtgta atagcagata
    23521 ctgctactgc atcagtagga cataaaattg ctgctattgc aaaagcggct ggcattggta
    23581 aggcaggcca aatccaatgt ataaaatagc caacaccgac tacagttgca aacactagtg
    23641 ccattgacat taatagtata ggtttacgat attctaataa ttttgttcga gagacgtggg
    23701 taccttccac aaaaagtagt ggcgcgataa cggcaaacat aaatacttca gaattgaatt
    23761 ggaaatcaac ttgtattgga ataatgaaaa taacgacacc taatgcaatt tgaataaagg
    23821 cagtaggaat ttgtgggaat cgattattga taaccgaact aataatcaca gcaaaaataa
    23881 aaattaaaaa tgcttctaat agtgccatac aatactcctc aaaattttaa tagttaatat
    23941 tttatcactt ttaaggcata atgacataga tatattgata aaatgaagtt attttcaaaa
    24001 aaactctagt atcggttgaa ctgatactag agcgagatgt ttaaattatt gattgtcata
    24061 tctgaaatga ccgctgtcat tttgtcgttg ttcatacgcg agcttttcag cattcgtttt
    24121 gtatttttta taaaagaaaa ataaaaatat aaaccagaat ggcgaaatat aaatagctgc
    24181 tcttgtttcg tcactaaaga ataataaaat gaatacaaag aagaagaacg ctagaataat
    24241 gtaagcaata ggcttaccac caatcaactt aaatttactg tttttatgtg cctcaggatg
    24301 ctttttcaaa tacattagat aagcgacaat aatcattgcc caaacaacta aaaacaacac
    24361 agttgataac gttgtaacgt atatgaatag ttgaattgca ttagggaaaa tgtagtttaa
    24421 caaggctgct ataagtaatg caattgatga aactaacatt gataaataag gcacgccatg
    24481 actattcgtt ttatttaaaa ctttaggacc taacccttgt tgtgacagtc cgaataagat
    24541 acgactattc gaatagatac cactatttgt agcagaggcc gcggcagtta gcacgacaaa
    24601 gttaacgaca cctgctgcaa atggtacgcc gattaatgta aagagtttaa cgaaagggct
    24661 actatttgga tcgatatcat tccaaggtat gactgacata attactaata gaccaccgat
    24721 atagaataat aaaatacgga taggtacatt attaattgct ttcggtaagg ttttttcagg
    24781 atctttcgtt tcaccagcag ttacacctat aagttcaata ccaatgaatg aatatacagc
    24841 aatttggaat gacattaaga aaccaaatgt tccaccaggg aacatgccac cgtgactgat
    24901 taagtttgtg aatgatgcat gtccataatg tgttttaaat gagaaaaaga ttaatacaag
    24961 accaacgata accatcgcaa taattgtgac aactttaata atcgagaacc aaaactccag
    25021 ttcaccaaat aatctggcac ctaataagtt gaagctaatc aagattaaaa caataaatag
    25081 cacggtaatc caatttggga cttgtggata ccaaaatgca aagtattgtc ccatcgcagt
    25141 taggtctgac atacttgata caatccaaca taaccagtaa gtccagccaa tgacaaagcc
    25201 accaaaaggg cctaaatatt catttgcaat atcaacaaat gaattaaatc ttgtattgct
    25261 caacaacaat tcgcctaatg cgcgcataaa agcgaatagt acaaccccaa taatcatgta
    25321 tgtgaataac agtgatggac cagttaaaga tattgtttga cctgatccta ggaataaccc
    25381 agttccaatt gcgcccccaa ttgctattaa ttggatgtgt ctgttattca actctctatg
    25441 caattttctt gccataattt tcctcctcag gataaagcaa ataaaaaagt tgtgtgtaag
    25501 cgttttctta attataaata ctaaagaaat ccatttaata aagcaattat ttttttaaat
    25561 ataagaaaaa acatttgata ggtaagggta tgataactaa aacttatcga tttttttgaa
    25621 aagatataag tttttatgca aaaatataaa ataatcatct aaatgaagca gttaactata
    25681 tatattagat aagctatggc ataataaata acattttaat ttgagtaaag aaggtaaggg
    25741 tatgaagata gggacaatcg ccgatttaca tattgatcgt cataataaaa aaacatccga
    25801 agattactta gaggcattgg ttgaaatagt taagtataag aaattggata tattgttgat
    25861 tgcgggggat atctcaaatc attatcaatt gacgcaccaa tttataacgc aattgacaaa
    25921 acaattagat atacctgtga aatttgtacc tggaaaccat gatttatggg aagttgaaag
    25981 tatgactacg caagacattt ggaataatta taagagtatg tcacagtgct tggtaggaaa
    26041 accatttata gtaaatgaag aatgggcaat cataggacat actggctggt atgattatag
    26101 ctttgcagca caacgatttt cattagatga gttacaaaaa ggaaaacatt atggtgcgac
    26161 ttggcaagat aaagaacgaa tatcttgggg catatcagat caaaatttat ctaaaatagc
    26221 ggctgaacaa gtgaagaaag atatattaga agtaggaaat agacgagtga ttttagtcac
    26281 acatgttgtg acgcaccctg atttcattgt tcctatgccg catcgtatat tcgattttta
    26341 taatgcattt attgggacaa gtgatttcaa tcctttgtat gcgatgttcg atataccata
    26401 tagtattatg ggccatgttc attttcgtaa aagtgtgata gatgatggca gatgttatct
    26461 ctgtccgtgt ctaggctatc caagacaatg gcgttcagaa gatatttacc aggaaataaa
    26521 tgagacgata caaataatag aaatttaaaa tgcgcaaacc tgacccagtt tgcgcatttt
    26581 atgttttaca cacgcgagta atgtgtttac ttacgtgtgt ttattttgtt gctgattttc
    26641 aattgtatat gaatgtggtt gcacataaat gcactttctt cctggtgaat taaagctgta
    26701 ttccattttc tctttacgaa ttttaataat ttgtttgcga tttggaatga tggcaggtaa
    26761 aactaggcca cgacgaatat gactccaaag tggatcgata taatagtaat agtaatcatc
    26821 gtacccaatg agtaacgtta cgtgaatatt tgaaacttgt ttcgctggct tgttatcaaa
    26881 gcggaaaaca cgtagtaatg gtttagaacc aagattagta tggtatatta acacaggttg
    26941 accttgatcg ataatacctt taagatcttc taacgattta ccagtgccgt ctacgatatt
    27001 aggattgtat ttttgtaaaa atggtacata tgcttctgga aatatcgttt gatgataatt
    27061 gccaagctta atgaataagt gatgtccaac ataaccttta tgtggattgt tcggatgtgt
    27121 cggccaatgt ctcataattt ctgtagcagg gatatgttgg ttgttgtatt gcaacatcat
    27181 ggctgcggaa acaccttcac accccatgac catagggata ggaaatagct gactgatagg
    27241 tttaactggt aatatttttc ggttcataat atagtcctcg cattgattca ataaatattt
    27301 aatataatta tatagcgtca atgcaaaatg tcctaaacat atgttttaca tgagtgaata
    27361 aaattaatgg agtgataaaa tggaatatca attacaacaa cttgcgtcgt taacgttagt
    27421 aggtattaaa gaaacgtatg aaaatggacg acaggctcag caacatatag cagggttttg
    27481 gcaaagatgt tatcaagagg gagtaattgc ggatttacag ttaaaaaata atggtgattt
    27541 agccgggata cttggcttat gtatacctga attagacggt aagatgtcat atatgattgc
    27601 agttaccgga gataatagtg ctgatattga aaaatatgat gtcataacat tagcaagttc
    27661 aaagtatatg gtatttgaag cacagggcgc agtacctaaa gcagttcaac aaaaaatgga
    27721 agaggttcat cactacatac atcaatatca agcagatacg gtaaaatcag caccattttt
    27781 tgagttgtat caggatggtg atactacaag tgaaaaatat attacagaaa tttggatgcc
    27841 tgttaaaggg tgattgaata gaaatgtcct tgctatgaag gcgtaatttt agttgaagat
    27901 tcgatctcat aattcataaa gaagaaccct gacaaagata gatatctgtg ctagggttct
    27961 aattatgttg aagtgttatg cgacatgttg ctttttaatc attttaaagt aaatgatttg
    28021 tagactgact aatagaatgg ctgtaatgaa gataataatc atatatggtg atgtattaaa
    28081 ttcgcctttt aagccaacta atggtgcaac agcgccacct aagataaatt ggaataagcc
    28141 aagtaaactt gatgcgttac cactgccacc tgttcgttct tccatagcca ttgtgaaacc
    28201 aagcggtcca attgacgtca caggacacac atttaagaag aatgcgatga gtaagaccca
    28261 aagtggtaaa tggaatgtaa gtgtcaggat aattaaagca acacctacca cttgtataat
    28321 agttaaaatg attaataata tgtggcgatg taatttttct actaataaag caacgacttg
    28381 actgacaatg attaaaccta caccgttaac agcaaacatg atactaaatt gttggggtgt
    28441 catattatac aatttttgag taataaatgg cgatgcagat gaataactaa atagcattac
    28501 ataagttaaa ccttgtaata gcattggaat aataaatgct ggttttttca aaagacttcc
    28561 aaaatcttta atgacgctac taaaattcac ctgctttaat tcatctttag atgttttagg
    28621 taattgagaa gcgacgccaa ttaaaatgat gagtgccaca atagttaaaa ttgtgaaaat
    28681 agaacgccat gttgctacgg ataaagctaa tccaccggct aatggtgcaa gaatagtgat
    28741 gatgccatta actaccatta aagatgctaa aaatttagcg agtgcgttgc cactaaattt
    28801 atcaccagca gaggcttttg caatcacgat gacgccacca ccagttaaac cttgaataaa
    28861 tcgtaaagtt aagaataatg gcaattgatc aacaaacata gacaaacctg ataccaaaat
    28921 gaaaatgatc aaaatggata cagcaatccg tttgcgacca aaagcatcgg ataaaggtcc
    28981 aaagataaat tggcctagtg caagaccaat cattgtgaat gataatgtta attgaatttc
    29041 tgatgtagta gaaccaaaat caccttgcac tttaggtaat gatggtacgt acatatctat
    29101 agttagtggg ccaaaagcgg tcatgacgcc taacgtaatt agcaataaaa atgaaaaatg
    29161 cttcgttttg gttttcgttg attgcatgat cagactcctt taaatgatat aattatataa
    29221 attatatacg ttttgtgtgt atttgtatgt agttagaata caagtttata taaaaaatcc
    29281 ctatactctt aatgcatcat cacgaataac gtagtgatac agataaagta tagggaatta
    29341 atgtttatca tcaaagcagg tgtaataatt aattagcgcc accattgtca tctttaaata
    29401 agctttctaa tttagattta atactgtcga attttgtatt aatatcattt aacatgcttt
    29461 caattttacc ttggcttgca ttgtttttaa gtgcattatt tgcctctgtc aatttgttga
    29521 tttggtcttg ataaaattga gttagcttag aatcagcttt gttttgttct tgctgcttca
    29581 agttgtcgat ttgattttgt aaatttttaa taatgtcatc agttttttgg ttgtttttaa
    29641 tattttcttt agcattatct acttgctggt taatttggcc gtcttgattt tcaacttgtt
    29701 ttttataatt ttgagagact ttagggtcat tactaacttt atcgctatca ttgttaagta
    29761 aggcgcgtgt gacaaaaata gcgacaataa ttaagagaat ggcaataatg atatataacc
    29821 atttttttga acggcgggat ttctcgtttt cttcttcaag aatttgttct cttcgataat
    29881 ctctaccatt atagtatcgt tccgggtgtt cttcaggatc gcctttagca tattgttgtc
    29941 tatacgatgc gtcttcagat tgacgacgat gattttggtt ttgattgtcg tattgatatg
    30001 aatcacggta tttatcagtt cttttcatgg gtttcacctc attcaagttt taactgcaaa
    30061 taataaagct gatgatttac tttgacatta ttgtaatttc agaatacgag caatgtcagt
    30121 tgcagtgttt aataaatttt gttcgttatt ttgtaggaca tcttctaaag tgctaggtga
    30181 agagattata gaataggcac tatcaatacc gaaatcgtaa acatgttgat aattttcgcc
    30241 tagactgcca caaatcgcga tgacaggaat atgatattgt tttgcagcta acgcaacgcc
    30301 tacgggtgtt ttaccaaaga tggtctgata atccatgcgt ccttctccag taataacgag
    30361 gtctgcatct ttaattcttt gatgaaaatc tgtaatgtca aagacgacat caataccttt
    30421 tgttaaagtt gtctcacaaa acgctaataa tgctgcgccc ataccgccag ctgcaccaga
    30481 acctggtatt tgattaacgg actttcctgt gcacattttt atcttatcat gataatgcga
    30541 cattgcgaaa tccaactttg gtatcatctt tgcatcagcg cctttttgag gaccataaat
    30601 ataggtagca ccattttcac ccaataaagg atttgaaaca tcacaggcca ctttaaaggt
    30661 cacctctttt aatcgcgaat ctagattggt tatatcgatt tgtgcaatgt gagcaagatt
    30721 agcaccattc atttgtaata agtccccgtt tacatcagta aactttacgc ctagtgcact
    30781 tagcatacct gtaccaccat catttgttgc actgccacca atccctaaaa taatggtctt
    30841 agcaccatga tttaatgcat ctttaattag ttcaccggta ccatatgatg atgtgtataa
    30901 aggattacgt tcctcttttt ctaataaatc caaacctgac gctgccgcca tttcaataat
    30961 tgcaatttgt tgttcgtctg cgcgtgcata acatgcttca ataggtcgca ttaaagggtc
    31021 attaacgatg actgtatact tagtggcacc tgttgcatgc attaaagcat ctgtggtacc
    31081 ttcaccacca tcagccatcg gaatgatatc ataatgaagg gtattcccat aaacattagt
    31141 aaaagcctgt tttataatat tgccaacttg ctgtgcggtc atactttcct taaatgagtc
    31201 aggagcgatg acaatttttt gtaattgcat agtagacatc ctctcattac tgttgtcgct
    31261 cttattgtat ataaaattac tagtgaacta aagtaatctc tatagtgcta atgagtcacg
    31321 cgataaatca gttacattat aatggcgtat aaggatgagg ggaaagagac taaatttgct
    31381 gtgaaagggt ataaagattg aaataagcat atttgaagtg aagcggattg gctcgcatat
    31441 tcgagtatgt tcgagaacgt agttatgcat atattttgat gttgaggagt tacacatatg
    31501 aaactaacac aaacgcatgc tgaaatttta aaatttatca ttgttggcgg cattaatacg
    31561 ttaaattatt atgttgtcta tttattgctg ttaaaattat tacacattga atatatgatt
    31621 agtcatatta ccggatttct agtcgctttt gtgatttcat attatttgaa ttgttatttt
    31681 gtttacaggg taaaacctac ttggagaaaa ttcattagtt ttccaattac gcagattgtc
    31741 aacgtaagct tacaaacagt tttattatat gtatttgtat cctggctaaa tttgccagca
    31801 gaaattgcac catttgctgg tttaattatt acgataccca tcacatttat attatctaaa
    31861 tggattttaa aagatagcaa ttaaagtagc gtaaaccact aaaaaaactt tacttaagcc
    31921 ttaatattgc gtgaaatata ataaataaat gatataatat gatggtcgcc taacatctcg
    31981 ggcgttactt taacgcagag aggaggtgta tgacggatgt tcaatttatt aattaacatc
    32041 atgacttcag ctataagcgg ctgtcttgtt gcgttttttg cacattggtt acgaacgcgc
    32101 aacaataaaa aaggtgacaa ataaccaaca cctaaataaa tcccctcact atggcagtag
    32161 tgaggggatt tggtgtattt agatgttcaa tttattatgt aattaattat agcattgatg
    32221 aacaaggtgt gcaatgtatt tttgcaatat tacaataaat gaatttaatt atattagaat
    32281 taagtatttc gaaaaatgat ttaatagttg agtcatagga tcattagata aagcgaataa
    32341 tcaattatag ggacattggg atacaaatca atgtactaga ctctacaagg ctatattcag
    32401 ggacccaaca aagagaaatt ggattcccaa tttctagaga caatgcaagt tggggtggga
    32461 cgacgaaata aattttgtga aaatatcatt tctgtcccac tcccagaacc actacataat
    32521 aaatcattag tggctcttta tcatttctgc cccataacct tgtgaatttt taaaagaaat
    32581 gtgtcacaaa tccacgcgac attgataatc gttatcaact aatatatgat gtacttgtaa
    32641 taagtattaa tttttaacaa ataacaaatt tatattatgt atatcatcca gtgaaataaa
    32701 taatataagc ggcttaattt agattattaa ttgaaaggag ttacatatac gatgaacaat
    32761 cagacaaatt ggataaagat actcagcgga tttgcttctg atagtaaatg gaaaattatg
    32821 ttatcaattt tgttgtctat catcagtgtc ttttctggat tagttcctta ttgggcagta
    32881 tttaaaatta ttttaatgat gattaacaat acatatacga ttaattcgat tatggtttat
    32941 atctttattg ctttaatcgc ttatatttca caagtgtgtt gttttggagc gtcaacgatg
    33001 ctatcacata ttacggcata tgaaatttta tctgaaattc gtaaaaaatt agctcaaaaa
    33061 ttaatgcgtc tccctttagg cgtagtggaa tctaagaaaa taggtgaatt aaaaaatata
    33121 tttgtcgata aggttgaaac aatagaatta cctttagcac atatgattcc tgaagttata
    33181 ggaaacttac ttttgtcagc tgctatcttt ttatacataa tgctcattga ttggcgtatg
    33241 gctagtgcct tattagtaac gataccaatt tcaattttcg cttttaaaaa agttatgtct
    33301 ggatttaatg agacatatgc tgaacaaatg aaatcgaata attatatgaa tagcgcgatt
    33361 gtagagttta tcgaaggcat tgaagtgatt aaaacattta atcaatctca aagttcatat
    33421 aaaaaatata aagatgcagt agataattat aagattcaca ctttgaattg gtttaaaaat
    33481 acatgggggt atatgaattt aggagctagt gtattacctt caacattttt agggatttta
    33541 ccggtcggca tgtatttgat atctatcaac caattaaact atgcggaatt tttcctatgc
    33601 atcgtattat ctttaggtgt agtagcaccg attaagaatt ttactaatta tgtaaatcat
    33661 ttaaagtcta tacaatacgc attaactgaa gtgaatcaaa tattaagtct agaagagtta
    33721 gtattgtcaa caaaatttaa gaagcctcaa cattatgaaa ttgcttttaa taatgttgga
    33781 ttttcatata acaaagataa ggacgatctg gtctttaagc atttatcatt tacagtacca
    33841 gaaaataatt tcacagctat cgtcggggca tctggtagcg gtaagtcaac cattgccaag
    33901 cttatatcac gatactggga tgtgacttca ggtgaaatta cgattggcgg tataaatata
    33961 aaagatattg aatcgaaaca acttaacgat ttagttggtt ttgttggaca agataacttt
    34021 ttattaaatc ttacttttaa agaaaatatt aaacttggca atccagaagc tacggatgag
    34081 gcagttgaaa aagctgccaa gttagcacaa tgtcatgaat ttattgaaaa gttgccagat
    34141 ggatatgata cgaatgttgg tacagtggga gataaattgt ctggtggtga aaaacaacga
    34201 gtcactattg caagaatgat attaaaagat gcgcctatca ttgtattaga tgaagcgact
    34261 gtttacgttg atccagacaa cgaacaaaaa attcaagaag cattaaatgt gttgacgcag
    34321 gataaaacat tgattgttat tgcacatcgg ttatctacga ttcaacatgc agatcaaatt
    34381 attgttttag gtaaacaaca aattttagaa aaagggtcac atcacttatt gctaaaatta
    34441 aacggtaatt ataagaaaat gtgggatacg cacatgcata caaaagattg gggaatcaat
    34501 actggacata attaaactaa tgagaaaagg aggtcaaata tgtttcaaat tacatttaaa
    34561 attttaaact ggataagacc atataaagca agaatgattt taggatttag catgtcattt
    34621 ttaaatgcta tttttattgc gttacctatc tttttagctg caaaaatatt taataatgtg
    34681 ctatctcata aacctattta tatgaaagat atattgaatg ttgtaattat catggtttta
    34741 ttagtgattg gacgatttat tacagcatat ttcaaaagca aaagccatga gagcatcgct
    34801 tatgaaatga gtgcgaaaga acgtttagat ataggggata aattgaaaaa tgtaaggtta
    34861 ggttatttta attcgcatca ttcaaatgag ttaacaacaa tagtaacaac agatttaacc
    34921 tttttagaaa actttgctat gaaaatggtg gacgttgttg ttaatggata catattaatt
    34981 acagtactca tattgtctct acttgtagtt tcgtggcaag tatcattatt agcatgcatt
    35041 ggcgtattac tatcattttt tgcgattcaa ttattagaaa gaaagagtcg acaaaatgcg
    35101 ccagcgtatc ataatgtaca aaaccaatta gtggaaaagg tattggaggt tattcgtggt
    35161 attcaagtaa taaaatcatt cgcgaaagaa aatacgagtc ttaaaagttt taaccaagca
    35221 gtcaatgaaa gtaaacgtat aaatacaaaa atagaaatgc aatatatccc attcaattta
    35281 ttgcatttac ttagtttaaa agttgtttca ataatgattg tattagttgc atgcttatta
    35341 tatatgaatc atagtattga tttacctacc cttattatga tttcaatttt ttcatttgtg
    35401 atatttgata gtgttgaaaa tattaatagt gctgcacacg tacttgaaat gatagatatg
    35461 acgatagatg atattgaaaa gataaaaaat gctccagaac tggatgagaa tggaaaaaat
    35521 ttgacgatta aaaatgaaaa tatcgctttt caaaacgtga acttttcata tgatgataaa
    35581 caagtgataa agaatgtgaa ttttgagata cctacacaaa catcaacagc aataattgga
    35641 ccttcaggaa gtgggaaatc tacattatgt cacttactct tgcgctttta tgatatcgat
    35701 gatggaaata ttcgcatcga tggtgttgat attaaagata tgacattaag tacgttaatg
    35761 tcgaaaatta gtgcagtatt tcaaaaggtg tatttattta atgatacgat tgaaaataac
    35821 atattgtttg gcaatccagg tgcaacgaaa gaagaaatta ttcgtgcagc gaagcaagca
    35881 tgttgccacg acttcatcat gtcattacct gagggatatc aaacaatgct aaatgaaaaa
    35941 ggtagtaatt tatctggcgg agaaaagcaa aggatttcta ttgctagggc gatattaaaa
    36001 gatgcaccaa taattatttt agatgaagca actgcaagta ttgaccctga aaatgaacag
    36061 ctgattcaaa cggcaattaa tgaattaagt aaaggcaaaa cagtaattac aattgcacat
    36121 aaacttgaaa ctattaaaaa tgcagatcag attatagtgc tcaatgaagg tgaaataatt
    36181 caaaaaggta gtcatgatga attaattcga aaaccaggaa tgtatcaaga ctttataaga
    36241 ataaaaagta aatcagcagg ctggaaatta taaataatag tttaatatgg aatcagaatt
    36301 tggaaataaa aagggtgata gataatcaac agcaaaataa atcccctcac taggacaata
    36361 gtgaggggat ttggtgtatt tagatgttca atttattatg taactaatta tagcattgat
    36421 gaacaaggcg ctcaacgtaa tattacaatt aatggattgt ttcacaagat ggtaaagcta
    36481 ggatgtcttt ttattaagaa ataatgcaat tattaatttt aactgacata ttttatcgaa
    36541 tcgctgttta tatctgcccg aattccttaa gaagtcttag tcatttcaat agcaaggtca
    36601 aaattttgcc aaaatttata gttatactga gaagtttaaa ttcatgtttt cttgaaaaac
    36661 atgcgcctta aatgtaaact tattaattat aaaagtttac atttggattg aggtggttat
    36721 ttttatgagg atttttatta caagtacgaa tactgatgta ggcaaaacct atgttacaaa
    36781 gcatttatac catgctttga aaacacgtgg tcatcgagtt tgtattttta aaccatttca
    36841 aactgaggaa cgccaagacg ggacgtttcc agatttagaa gtatttaaaa atgaatgtga
    36901 tttaagctat gacataacgt cactttatac ttttaagcaa cctgtatcac cacaccttgc
    36961 atttaaaatg acagatcaaa tttttctaaa taagcagcgt gtattagata aggtaaaagt
    37021 tttagataag gaatttgatt ttatcttaat tgagggtgct gggggaattg ccgtaccaat
    37081 atatgaaggt acagatgatt tctacatgac taaagatcta atcaatgatt gtgcagattg
    37141 tgtcatcagt gtgttgccat caaaattagg tgctattagc gatgccattg ttcaccaaga
    37201 ttatgttaat cagaatgtat cggcgagtaa ttttttaata atgaatcgct atacagacag
    37261 ctatattgaa aaagacaatc aaatgacgat tggaaaatta acaaataaaa cagtctatac
    37321 atttgaagaa catgccacgt atgaaaattt ctcagaagca tttttaaaac aattaatagg
    37381 agttaaaaat gaattacaca caacaactta aacaaaaaga ctcagaatat gtttggcatc
    37441 catttacaca aatgggtgta tatagcaaag aagaagcaat catcattgaa aaaggaaagg
    37501 gtagttacct ttacgatacg aatggcaata aatatttaga tggttatgca tcgttgtggg
    37561 tcaatgtgca tggtcataat aacaaatact taaataaggt aattaaaaag caactcaata
    37621 aaattgccca ttctacgctg ctaggatcat caaatattcc gtcaatagaa cttgcggaaa
    37681 aattaatcga aatcacgcca agtaatctaa gaaaagtatt ttattctgat acaggcagtg
    37741 cgtctgttga aatcgcaata aagatggcat atcagtattg gaaaaatatt gatagagaaa
    37801 aatatgccaa gaaaaacaag tttataacgc taaatcacgg ttatcatggg gatacgattg
    37861 gtgcggtaag tgttggtggt atcaagacct ttcataaaat atttaaagac ttaatatttg
    37921 agaatattca agtagaaagc ccatctttct atcgcagtaa ttacgatact gaaaatgaaa
    37981 tgatgacagc tattttaacg aatatagagc aaattctaat tgaaagaaat gatgaaatcg
    38041 cagggtttat attggaaccg ttgattcaag gtgcgacagg cttgtttgtt catcctaaag
    38101 gctttttgaa agaagtcgag aaattgtgca aaaaatacga tgtcttatta atttgtgatg
    38161 aggtagcagt tggttttggg agaactggaa agatgtttgc atgcaatcat gaagatgttc
    38221 aaccggatat tatgtgttta ggtaaggcga ttactggtgg ctacttacca cttgcagcta
    38281 cattgacatc taaaaaaata tacaatgcat ttttaagtga ttcgcatggt gtgaatacct
    38341 ttttccatgg tcatacatac accggaaatc aaatcgtttg tacggttgca ttagaaaata
    38401 taagacttta tgaaaaacgt aagttattgt cacatattga aacgacatca tcaacacttg
    38461 agaaacagtt acatgcgctg aagcgtcatc gaaatgttgg tgatgtaaga ggacgaggct
    38521 taatgtttgg agttgaatta gttacagata aagatagtaa aacgccgtta gaaattgaaa
    38581 aagttgaacg tattgtacgt aattgtaaag aaaacgggct aatgattaga aatttagaaa
    38641 atgtcattac gtttgtgcca gtgttaagta tgtcaaataa agaagtgaaa acgatggtac
    38701 gtatttttaa aaaggcagta cataacattt tagataggaa gtgttaatat gaatttggct
    38761 aaacgcatat tacaagggga acaattaaca aaagagactg tattgaaaat ttatgaggat
    38821 actaatattg ataccttaga tttattaaat gaggcgtaca ttttaagaaa acattatttt
    38881 ggtaaaaaag taaaattaaa catgatttta aatgctaaaa gtggtatatg tcctgaaaat
    38941 tgtgggtact gtggacaatc acgagatatt aaacaaaaac agcgatatgc tttaattcca
    39001 gaggaacaaa ttatcgatgg agcaaaggtg gcacatgata atcatattgg aacatattgt
    39061 attgttatga gtggtagagg accgagcgat aaagaagttg atcatattag taatactgta
    39121 agaacgatta aatctcaaca cccgcaacta aaaatctgtg catgtttagg attaacgaat
    39181 gacgaacaag ctaagaaact taagtcagct ggtgtagaca gatataacca caatattaat
    39241 acaagtgaaa attaccatga taacgtcgtg acaacgcata gttataaaga tagaacagat
    39301 acgatagaac taatgaaagc gaataatata tcaccatgtt ctggcgtgat ttgtggtatg
    39361 ggagaatcta atcaagatat tgttgatatg gcatttgctt taaaagaaat ggatgccgac
    39421 agtattccga ttaatttttt gcatccaatc aaaggcacaa agtttggaag catggatgat
    39481 ttaacaccaa tgaaatgttt aagaatcgta gcattattcc gattaatcaa tcctacgaaa
    39541 gaaattcgta ttgctggagg aagagaggtc aacttacgtt cgttacagcc attagcatta
    39601 aaagcggcga attcaatatt tgtcggtgat tatctaatta ctggtgggca accgaaccaa
    39661 ttagactacg atatgattaa tgatttaggc tttgaaattg attatgacac ttgtgaaaat
    39721 aaggaaaaca agaatgaagt ttcaagagca aattgattta ttacaacaga aagggttata
    39781 tcggtcgctt aaatcggtag ggtatataga tagacagtat attgaagtag aaaataagag
    39841 atgtacgaac tatacatcta atgattattt aggattaggt caaatagcgt ttgataagga
    39901 tgatttcgaa agatttatgc ggaagtatag ttatcactta tcaagttcaa gattaattag
    39961 tggaagttcg acagcttatg aagaaattga aacaatgtta gcaggttggc tcggatatag
    40021 tgcatgtact atcttaaata gtggttatga tgctaatttg gcgttattta atattttcaa
    40081 aaatacaaat tgtgtcgtgt tttcagatca agaaaatcat gcgagtatta ttgacggtat
    40141 taagttaagt ggtttagaaa aagtgatata taagcattta gatattgctg atttagaaaa
    40201 aaggttagag aaatacccta atcaaaatat accaaaaata atcatatctg atagtgtatt
    40261 ttcaacgaat ggcgacgttg tggatattgg tcaattagtc tcattaaagc ataaatataa
    40321 cgcaacactg atactcgatg tttcacatag ttttggaata gagaattact cgaattatca
    40381 aggtgtagat atactcactt ctagtttatc taaagcatgt ggtgcatacg ggggtgtgat
    40441 tttaagttca aatgatgtga aggatatgtt aattaatcac ggtagaccac tcatctactc
    40501 aagtagtttg ccaatttata atttgtattt tataaaaaga aacattgaaa agttaataaa
    40561 tgctgatgat agacgcacta aattaaatag tttgagtaaa tattttaacc aaaagttaaa
    40621 agcactcaat gttaattata atagttcaaa ctcgccgatt aagtttattg agtttgatga
    40681 catagaagcg gctgagaaca ttcatcaaac attattaaag catcatgtgt ttacaagtta
    40741 tttaaggtat ccaactgtga ctaagccaat gttaagaata tcattgtcgt attttcatac
    40801 tgaacaagat atagataggt tgtttgaaat tttgcatcaa gaagattgag gtgatcgtca
    40861 tgtatagtat aaaaatgcgt tctagcaatc aagatgttca tattagtggt gctgaaacga
    40921 tttgtgagtt tgacaaaata gaacagacgg tacaaaggtt ttataataaa ggtttttttc
    40981 atgaaaatgg gcaaccggat tttctcaata taaaaataca aaaaatcatg gaaccgattc
    41041 aacaaataaa agcattacaa attattgagg atgataaagc aaatctccaa catttaacac
    41101 aagaatgtgg tgtcactgaa caagcgctaa atcaagggat gacatatatt aaaaatgaaa
    41161 cggtttatac aggagctatt attctatctg ctatatctgg taaacgttta gattcatttg
    41221 gacaaagggg gattagggca acacattttt cgtttgaaga tataaataat aaaggtgatc
    41281 ttaatgaaag agtgactgat gccttagcaa ttgctagttg tatcaatgcg catccgtatg
    41341 tcaaaggaga actttgcgtg tccgatgact taacgtatac gacaggttat tttgccgctg
    41401 ctaaaattgg ttaccatcga ttatttgata ttaaaccagt taatacgaga tatggaggca
    41461 gaataatatt tgtggacgat tgtattgatt taaatcatta catatcattt ttagaaagca
    41521 caccgaagca agttgtttat gaaacggtat aggggtttta gtatgacatc aaaagatatt
    41581 actcaaatta gtgtcattgc tgcgatttta accattttgg cagttttgaa aataccgtcc
    41641 attataccag gattagattt tcaattatct gcaccggcag cattattgat attagctttc
    41701 tttggaatta aaaagtactt tttaggtgga ttattatcta gcctattatt actagtattt
    41761 ggcgtattta atccaattaa tgtgattatc tctattatat ttagagttat agctattgca
    41821 gttgtttatt tattgaaaat aaatgtacta tcattagttt tagcaagtgt attaggcagt
    41881 ttggtatcta ggctactatt atctattatt ttaaatttac ctgtgtgggt agtgttgtta
    41941 aacgcgattc caggcgtaat attcacttta attgtagcta ttcctttata tctcacattg
    42001 agaaaaagaa tggcagtatt actaagataa taaatcaaaa cacggtcgtc acaattactg
    42061 ttggcgaccg tgttttacta gctatttatt gttttcagtt tcttttgtat ctaacaattt
    42121 cactttgtga ttttcccaat caatttcata tgttgattta aatgttctag ttttaaagtt
    42181 tttataattt gcgcctgccc agtagaagcc attccaacga atttggtata aatccatttc
    42241 acgttgataa gttactgtaa ttttagattt tttagcgcca tcttgtctgt gtgatagtac
    42301 gcttaaaaat tctggattga agttacttct agataataat ggcatttggt gttgcgctat
    42361 gaagttttgg ccagcgtatg cactgctttg tctgccagct aagaagagtt cattaccata
    42421 tgttgggtgg aagctatctc ttccataagg tccccaacca ttattcataa ttttatgtgc
    42481 ttcaactccc cagccaacat ttttataatt tgtgttgcga cttaatgttg ttctgtaact
    42541 ttcttgttta taattaattg tttcagaaaa agctgtattt ccattaagtc caccagataa
    42601 accattagag atactaatgt caccaccaaa tgtatagcct aaagtatttt gaacttgaaa
    42661 ctcttcattt tgattttttg gtgcataatc aacgacgttt actgaatcat tagattgtga
    42721 gcttatagat acattgtatt tagctcccca atataatttt gaaaagtcat agtcattagg
    42781 attaggtttc acaaagcctg agttaatatt cccagtagct ttaagtacta aagtatcttt
    42841 atcataactt ttatctttga tgaaattaaa tgttaaaatc tgtgaaattt taaatttatc
    42901 agaatctgct gtggctgttg ttttgtataa agtaactttg tcatcgactt tttttacgct
    42961 gactggtgtt attttacctt cagcattagc agtaccagaa agtaataata atgccataga
    43021 tgtagcaacg gatgatttga ctaatttatt cattttcata tcaattctgt cctttcacct
    43081 tgatttcatg agtcttccaa ttgacctcgt atttcacagt atagtttcta tttacaaatg
    43141 cattatggac tctatgtccg tctaaataac tgttgccata atgcgttgat cttttaatgg
    43201 catgagtgac atccatgttt cttccgtaag taatttcaaa ttcgcttgta tcgcttgaac
    43261 ctttttcatg agatactgtg gcgataaatg aagggttaaa tccactttgt acaagaggtg
    43321 gtaactcact gtctggaacg aaataatctc taggatcttt actatgaggt ttgtagccta
    43381 caaataaatc gctatcaaag gctgattttt gacctgattc agtggcgaat gaattcgctt
    43441 tgacgcccca taaaacactt tttgagtttt gttgttctac ttcacttaca taattttgtt
    43501 gtgtatagct aatcgattta gaatagttaa atgatccatt accaccgagt gatggggctg
    43561 attggaaatt accaccgata ttgtatccta atgtctgact cacgtttgta gattcaattt
    43621 tatttttagg taaataatta attaaagaaa catatttatc atttgttttt aaaccaatat
    43681 tatattggaa tggccatcgc atagctttaa catgattagt ttttttatag ttgtaatatg
    43741 ttgttctaga gctaatgaat ccttgcatct ttaatatcaa agcatctttg ttatattttt
    43801 tatcctttac aaaatcaaat tgaatatttt gagtcacgcc ccatttatta cttgttttat
    43861 cttctgtcct tttgataatt tctatatcgc ttcctttacc gatgtcttca gtatcgttag
    43921 cagctttagc attttctaat aacggattgg caagaggggc aagtaagctc acagataaag
    43981 ttgtagttaa tattttattt ttaagcataa gtttcacttt ctttctataa ttttatttaa
    44041 cttaattaaa taataatata ttttgggcgt tattataatt aactgttcat taacaattga
    44101 ccattatcaa ctttttttac aattaagtta aaaatgccat aattccgttc gatttaacct
    44161 tttttgtttg gaatgctaaa agctaatttt gtgagaa
//
LOCUS       DALPQQ010000009        42462 bp    DNA     linear   BCT 22-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus strain K18-6-464
            SAMD00233528-rid16434743.denovo.009, whole genome shotgun sequence.
ACCESSION   DALPQQ010000009 DALPQQ010000000
VERSION     DALPQQ010000009.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMD00233528
            Sequence Read Archive: DRR236061
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 42462)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 42462)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001543423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001543423.1
            Genome Coverage       :: 77x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/22/2022 17:09:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,811
            CDSs (total)                      :: 2,743
            Genes (coding)                    :: 2,689
            CDSs (with protein)               :: 2,689
            Genes (RNA)                       :: 68
            rRNAs                             :: 2, 4, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 4, 2 (16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 54
            CDSs (without protein)            :: 54
            Pseudo Genes (ambiguous residues) :: 0 of 54
            Pseudo Genes (frameshifted)       :: 27 of 54
            Pseudo Genes (incomplete)         :: 27 of 54
            Pseudo Genes (internal stop)      :: 10 of 54
            Pseudo Genes (multiple problems)  :: 10 of 54
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..42462
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMD00233528-rid16434743.denovo.009"
                     /strain="K18-6-464"
                     /db_xref="taxon:1280"
                     /geo_loc_name="Japan: Niigata"
     gene            complement(1..26631)
                     /gene="ebh"
                     /locus_tag="O7798_000409"
                     /pseudo
     CDS             complement(1..26631)
                     /gene="ebh"
                     /locus_tag="O7798_000409"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499969.1"
                     /note="frameshifted; incomplete; missing C-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hyperosmolarity resistance protein Ebh"
     gene            complement(27029..28420)
                     /gene="norB"
                     /locus_tag="O7798_000410"
     CDS             complement(27029..28420)
                     /gene="norB"
                     /locus_tag="O7798_000410"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000414682.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux MFS transporter NorB"
                     /protein_id="HDC2862687.1"
                     /translation="MEKPSREAFEGNNKLLIGIVLSVITFWLFAQSLVNVVPILEDSF
                     NTDIGTVNIAVSITALFSGMFVVGAGGLADKYGRIKLTNIGIILNILGSLLIIITNIP
                     LLLIIGRLIQGLSAACIMPATLSIIKSYYIGKDRQRALSYWSIGSWGGSGVCSFFGGA
                     VATLLGWRWIFILSIIISLIALFLIKGTPETKSKSISLNKFDIKGLVLLVIMLLSLNI
                     LITKGSELGVTSLLFITLLAIAIGSFSLFIVLEKRATNPLIDFKLFKNKAYTGATASN
                     FLLNGVAGTLIVANTFVQRGLGYSSLQAGSLSITYLVMVLIMIRVGEKLLQTLGCKKP
                     MLIGTGVLIVGECLISLTFLPEIFYVICCIIGYLFFGLGLGIYATPSTDTAIANAPLE
                     KVGVAAGIYKMASALGGAFGVALSGAVYAIVSNMTNIYTGAMIALWLNAGMGILSFVI
                     ILLLVPKQNDTQL"
     gene            complement(28577..29899)
                     /locus_tag="O7798_000411"
     CDS             complement(28577..29899)
                     /locus_tag="O7798_000411"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499971.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid permease"
                     /protein_id="HDC2862688.1"
                     /translation="MSNGKELQKNIGFFSAFAIVMGTVIGSGVFFKISNVTEVTGTAG
                     MALFVWFLGGIITICAGLTAAELAAAIPETGGLTKYIEYTYGDFWGFLSGWAQSFIYF
                     PANVAALSIVFATQLINLFHLSIGSLIPIAIASALSIVLINFLGSKAGGILQSVTLVI
                     KLIPIIVIVIFGIFQSGDITFSLIPTTGNSGNGFFTAIGSGLLATMFAYDGWIHVGNV
                     AGELKNPKRDLPLAISVGIGCIMAVYLLINATFLLTLPIELLAGNLNAASDTSKILFG
                     ENGGKIITIGILISVYGTINGYTMTGMRVPYAMAERKLLPFSHLFAKLTKSGAPWFGA
                     IIQLIIAIIMMSMGAFDTITNMLIFVIWLFYCMSFVAVIILRKREPNMERPYKVPLYP
                     IIPLIAILAGSFVLINTLFTQFILAIIGILITALGIPVYYYKKKQKAA"
     gene            complement(29930..30970)
                     /gene="tdcB"
                     /locus_tag="O7798_000412"
     CDS             complement(29930..30970)
                     /gene="tdcB"
                     /locus_tag="O7798_000412"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499972.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional threonine ammonia-lyase/L-serine
                     ammonia-lyase TdcB"
                     /protein_id="HDC2862689.1"
                     /translation="MTTNTVTLQTAHIVSLGDIEEAKASIKPFIRRTPLIKSMYLSQS
                     ITKGNVFLKLENMQFTGSFKFRGASNKINHLTDEQKEKGIIAASAGNHAQGVALTAKL
                     LGIDATIVMPETAPQAKQQATKGYGAKVILKGKNFNETRLYMEELAKENGMTIVHPYD
                     DKFVMAGQGTIGLEILDDIWNVNTVIVPVGGGGLIAGIATALKSFNPSIHIIGVQSEN
                     VHGMAESFYKRDLTEHRVDSTIADGCDVKVPGEQTYEVVKHLVDEFILVTEEEIEHAM
                     KDLMQRAKIITEGAGALPTAAILSGKINNKWLEDKNVVALVSGGNVDLTRVSGVIEHG
                     LNIADTSKGVVG"
     gene            complement(31065..32183)
                     /gene="ald"
                     /locus_tag="O7798_000413"
     CDS             complement(31065..32183)
                     /gene="ald"
                     /locus_tag="O7798_000413"
                     /EC_number="1.4.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499973.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alanine dehydrogenase"
                     /protein_id="HDC2862690.1"
                     /translation="MLVAVVKELKQGEGRVACTPENVRKLTDAGHKVIVEKNAGIGSG
                     FSNDMYEKEGAKIVTHEQAWEADLVIKVKEPHESEYQYFKKNQIIWGFLHLASSKEIV
                     EKMQEVGVTAISGETIIKNGKAELLAPMSAIAGQRSAIMGAYYSEAQHGGQGTLVTGV
                     HENVDIPGSTYVIFGGGVAATNAANVALGLNAKVIIIELNDDRIKYLEDMYAEKDVTV
                     VKSTPENLAEQIKKADVFISTILIPGAKPPKLVTREMVKSMKKGSVLIDIAIDQGGTI
                     ETIRPTTISDPVYEEEGVIHYGVPNQPGAVPRTSTMALAQGNIDYILEICDKGLEQAI
                     KDNEALSTGVNIYQGQVTNQGLASSHDLDYKEILNVIE"
     gene            complement(32658..33536)
                     /locus_tag="O7798_000414"
     CDS             complement(32658..33536)
                     /locus_tag="O7798_000414"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499974.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5'-3' exonuclease"
                     /protein_id="HDC2862691.1"
                     /translation="MPNKILLVDGMALLFRHFYATSLHKQFMYNSQGEPTNGIQGFVR
                     HIFSAIHEIRPTHVAVCWDMGQSTFRNDMFDGYKQNRSAPPEELIPQFDYVKEISEQF
                     GFVNIGVKNYEADDVIGTLAQQYSTDNDVYIITGDKDLLQCINDNVEVWLIKKGFNIY
                     NRYTLHRFNEEYALEPQQLIDIKAFMGDTADGYAGVKGIGEKTAIKLIQQYQSVENVV
                     ENIDALSAGQRNKINDNLDELYLSKRLAEIHTQVPIDSEALFEKMSFATTLNHILSIC
                     NEHELHVSGKYISSHF"
     gene            complement(33556..36996)
                     /locus_tag="O7798_000415"
     CDS             complement(33556..36996)
                     /locus_tag="O7798_000415"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499975.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dynamin family protein"
                     /protein_id="HDC2862692.1"
                     /translation="MINKEQLDLLYKLKKEVEKSRNEALLHTINQVIKKVYLQQYTCS
                     FVGHFSAGKSTLINLLIEQDILPSSPVPTTSNTAIVSVSDNHDIIANLPNQTYAKLSN
                     YDEVREMNRQNVDVESVEINFQSAKFENGFTLQDTPGVDSNVASHQSITEQYMYTSNM
                     IFYTVDYNHVQSELNFKFMKHINDVGIPVVFIINQIDKHQDDELSFSTFKSRVEKSIA
                     DWGIKLERTFYVSKFDHPENELEVLSSYLISLDQHRETIEDYTSRTVEYITEAQLDYI
                     QSEIQEVLEDLGIEEAEFEQAFLNSQQHQAISEEAQLLNNPDELMAFLKNKRKNILEN
                     AYIMPHNMREMLRSYLESMSQDFNVGGFFNKKKKKLQIQQQRLLTATDALQEHVNQQI
                     RQPMREDMSFVTRFINKKEASDKVLNQHYDVKPEMIEGLYQPQTSISNTYVLTFSDEV
                     VKAIKKYVEQQSTPIFKEIIENVQADELPTEESDDLKEYQRYTELNELRQSLTTKNYR
                     HYYIHLDESLDKLIGRQETTYQVATDNAQDNRDNQQLNQNTATTNMSIDIQKALDIIS
                     DVPLFKRTKQDIHETLTRIDNKLIKIGVFGTFSAGKSSLINALLGEHILVSSPNPTTA
                     ATTEISYGDESYITLKSQSQLLDEINAVVEYQDMSYSTIEDFINSDLEKLKSHLNKNQ
                     LAFIQAVEKHYKLYVNMLENGEKHAINQQELKKWSAEDEYATFVKTVHIALMHDWLKG
                     KIIVDSLGLHSNNQRHTNETEQILTSSDLILYVSYFNHSFTDNDKAFIEHMKDMNQLN
                     ENQAFKMVINAADLAESQDDLEAVETYVSDALRQVHLQSDIFAVSSRNALQAEDKGID
                     QLKQSIQQFVDVESKSILEQQMIHQLQQMDRSYVEMITEFETNKADISRRQQRLTDYK
                     DKQRLQHQLIDATLQHTDNEVEEQVYHLNARLKLQLLDDVKSVFNSQMTQNSDFNEEK
                     KVSTRVYLDQIHQRLFLEQSLITERIKKYFNKQLTEQIAPIVQQLADLHVIINPQFNF
                     ESANIEQPLLHIDFNDMLNALPKQLTKRKILNPNGQRDIHESICQSTLGLLQPQMGLL
                     RQQLELYVKQMAVEAESQFESFEANIQTQINDLLAFDLDTTLINQLKDKHQQLKTILY
                     "
     gene            37300..38640
                     /locus_tag="O7798_000416"
     CDS             37300..38640
                     /locus_tag="O7798_000416"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499976.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PepSY domain-containing protein"
                     /protein_id="HDC2862693.1"
                     /translation="MKNTFNPLQRLHFYAAIFIAPLLITLTISGIGYLFFPEVENNIY
                     KNEFFGDSDVKTHQTLNDAVHQVEQQYEGFFVSKVSILDEPYNKRITLSDMAGNQRYV
                     FLDHNNQFVADQNAKHTYSNVMRSIHSSLFTENTIINYLVELTACWMIFMILSGTYLL
                     IKKHLISNKSKALRWQKWHAMIGVIIAIPVFVLVLTGLPWSGFMGSKIAGMMDTNGDL
                     GQGELAINPPKSDLNELPWATRKNKQPASSEKGSSGHHGNAAMPQTKLDYQISIDKVV
                     EQAQKAGIKKPFSIVYPSDKNGTFIVSNTSNSGVTGLDVSPYKEQTLYFDQYSGKKLG
                     TIKYDDYGIIAKWFTWGIPLHEGHLFGILNKIINLFVCIALLVAIGMGFVSWIKRTKN
                     TAVKVPHRVKKPASISLIICLIVLGLLMPLFGLSLILVFIIELILYIKDRRAKQ"
     gene            complement(38846..39178)
                     /locus_tag="O7798_000417"
     CDS             complement(38846..39178)
                     /locus_tag="O7798_000417"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499978.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4889 domain-containing protein"
                     /protein_id="HDC2862694.1"
                     /translation="MGKKMGLGLSIALVVIGIAVVCLMIFSSQKTTYFGYMNSNTNAE
                     KVVSEKDGLVKHNIKVEPSNDFKPKKGDFVKLVSKDDGKTFYKQEIVKHDDVPHGLMM
                     KIHDMHMN"
     gene            complement(39262..40407)
                     /locus_tag="O7798_000418"
     CDS             complement(39262..40407)
                     /locus_tag="O7798_000418"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499979.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent RNA methyltransferase"
                     /protein_id="HDC2862695.1"
                     /translation="MFQLLAVCPMGLEAVVAREIQELGYETNVENGRIFFEGDASAIV
                     KANLWLRTADRIKIVVGRFNATTFDELFEQTKALPWESIIDKEGNFPVQGRSVKSTLH
                     SVPDCQAITKKAIVERLRRAYNEKGWLNESGAKYPVEVAILKDNVLLTIDTSGSGLNR
                     RGYRLAQGEAPIKETLAASLIRLANWKGDTPLIDPFCGSGTIAIEACLIAQNIAPGFN
                     REFVSEQWNIMPANIYDDYRDEADKMADYDKEIEVYASDIDPEMVEIAKRNAEEVGVS
                     DIIKFSVKDVNTLTIDTEEPVALIGNPPYGERIGDREEVEEMYRYIGKLMKQHPFLST
                     YILTSNKEFEYLVDRKATKRRKLFNGYIECTYYQYWGKKTERKTIEN"
     gene            complement(40616..40995)
                     /gene="rnpB"
                     /locus_tag="O7798_000419"
     ncRNA           complement(40616..40995)
                     /ncRNA_class="RNase_P_RNA"
                     /gene="rnpB"
                     /locus_tag="O7798_000419"
                     /product="RNase P RNA component class B"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00011"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00011"
     gene            complement(41058..41402)
                     /gene="gpsB"
                     /locus_tag="O7798_000420"
     CDS             complement(41058..41402)
                     /gene="gpsB"
                     /locus_tag="O7798_000420"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499980.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division regulator GpsB"
                     /protein_id="HDC2862696.1"
                     /translation="MSDVSLKLSAKDIYEKDFEKTMARGYRREEVDAFLDDIIADYQK
                     MADMNNEVVKLSEENHKLKKELEELRLRVATSRPQDNKSFSSNNTTTNTSSNNVDILK
                     RISNLEKAVFGK"
     gene            complement(41416..41979)
                     /locus_tag="O7798_000421"
     CDS             complement(41416..41979)
                     /locus_tag="O7798_000421"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499981.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1273 domain-containing protein"
                     /protein_id="HDC2862697.1"
                     /translation="MVKTVYVTGYKSFELNIFKDDAPEVHYLKQFIKHKIEQLLDEGL
                     EWVLIQGQMGIELWTAEVVIELQRTYDSLKFAVITPFQGHTEKWNEHNQSKYANIIKH
                     ADYVDSIFHTSYQGPFQFKQADQFMLEHSDQTLLIYDEEQEASPKFFKQMLVDFMDKT
                     NYTCDIVTFDELTAFINDLQWSEDQSF"
     gene            complement(41972..42322)
                     /locus_tag="O7798_000422"
     CDS             complement(41972..42322)
                     /locus_tag="O7798_000422"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499982.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YppE family protein"
                     /protein_id="HDC2862698.1"
                     /translation="MNDVVESLIYEVNNMQQNFENVKSQQQDHDFYQTVKPYTEHIDS
                     ILNEIKLHREFIIEVPYMNSRKFELLIANIEQLSVECHFKRTSRKLFIEKLKSVQYDL
                     QNILDGVTKEGTDG"
BASE COUNT        11159 a         7642 c         7089 g        16572 t
ORIGIN      
        1 acttgtgctt tatcaagcgt tggattgtta gtttgattaa ttaaatcttt tgcattttga
       61 actgctgctt ggtaagcatc tttttgtggt ttatcttcat tgataaactt gctacccgct
      121 tccgtttgct gttgatcttg aatgctatta cgtaaagctt ccattgcttg gttaagtgct
      181 tgtgcttcag ttaatttttg tgctacttcg ccacgagttg ctgcattatt aatttgattt
      241 tcaagtgctt gacgttgtgg tgtattcaag ttagacaagt tatttaacgt ttctgttgca
      301 cgttgcttat cttgagctag tttttgatca ccatgtaaat tgtttttagc atctgtcact
      361 gcctgtgtcg cttgatcaat gattgattta gctaatgtag gatcagttgt tttgttaatc
      421 aaatctttcg cgtgttgtac tgcttgcgta taagcatctt tttgcgcttg atcctcgtta
      481 ataaatttac tacttgcttc agtttgtggt tgatccttaa tactttcttt taatgctttc
      541 atcgcttcat ttaatgcttg cgcttgtgca atgatttcag ccactttatc acgagttgtt
      601 gcattattaa tttgattttc tagcgcttgt tgttgagctg gtgttaattg atctaaatga
      661 tttagagaat ttccagcagt ttgcttatct tgagctaatc gttcaacacc atctaatgca
      721 tttttagatg atattactgc ttgagtcgca cttgatacat tacctttatt gatagttgga
      781 ttatttaatc ctgcaatgat agactcagca ttttgaactg cttcatcata ggattgtttt
      841 ttattcggtt ctgcattgac atatgcactg ctcgcacgtg ttgcatcttt gtcagcaata
      901 ctttgttgta atgcatccat aagttgatct aatgcttgtg cttcagtcaa atcttgctta
      961 actgctgttc tagttgtttc actatcaatt aacgtatctt ccatatgttt ttgtgcattg
     1021 tttagatgtg ctaattgact aaccgtttgc ttagcatgat ctttatcatt ttgtaacttc
     1081 acatcaccat gtaatgctgc tttcgttgta ttcacagttg tcgctgcttg attaatcgca
     1141 ttattatcta atgttgcagt ttgttcattg ataatattat ttgcggcttg aacagcttga
     1201 tcatagtttt gttgctctgg ttgatcttcg ttgatatatt tgctatttgc tttagttgct
     1261 gcgttatctt gaatgctctg tcttaaacca tgcattgctt ggttaagcgt attcgcattt
     1321 tgttcaattt gatgaactgc agttactaaa gttgcagctg taacttggtc ttttaatgct
     1381 gttttttgag gatcatttaa gcttgttaaa gcatcaattg cttgcgtcgc atttgtttta
     1441 gcaacttgta aattatggtc tccatttaac gcttgaagtg ttgtttgaac tttagtaata
     1501 gcttgttcta cttctgtttg gttcgcattt tgaccagttt gtttgttaat cattgctgct
     1561 gcttcattta ccgctgtatt ataagcagtt tgtttatcag tatcagcatt gatgaagtta
     1621 ccacgttgtt caacggcttg atgatctgca atcgcattaa ttaagttacc catcgcagta
     1681 tttaaagatt ctgctgtttg tttgtgacca ttaactgcag caatatcaga tgattgcgta
     1741 atttgtgatt gtaactgttg cttttgcgca ttattcaaat gatctaattg atcaagtctg
     1801 ttgtttgctt gttgtttagc tgctgcaagg ttttcatcac catctaatgc aactttcgta
     1861 ttattcactt gtgtcgttgc accattaaca tcatctggat tcatcgtagg cgatgtagtt
     1921 tgattaatga tattattagc agctgttaca gcttggttat agtcattttg tctttgcgca
     1981 gttgcatcat gataatcttc agacgctaat gtcgtttgat tatccgcaac actatttctt
     2041 aataattcca tcgcatgatc taacgtttgt gctttttgat taatcgtagt gacatctgta
     2101 acaagtggcg cttgtgtaat ttgactttca aatgattgtt tttgtgcatc atttaagtgt
     2161 gttaagttcg ccaattgttg ttttgcttgt tgttttgcat ttgccaaatt gtcattacca
     2221 tttaatgctt gtttcgctgc gttcacttca ttagtgatgc tttcaacttg tgcttgtact
     2281 tcattagtac cactttgttt attcaataat gcttcagctt ttgctactgc ctgtttatac
     2341 gcattttgtt tgtcaggatc tgcatttaag taattaccgt ccgctaatgt ttgagcttta
     2401 tcattaatag cttgtgataa ttgatccatt gcttgatcta ggctcgttgc tgtttgttta
     2461 acttggttca ctgtagcaat ttcaggcgat tgatcgattt gaccttttaa tgcttgtttt
     2521 tgagcatcgt ttaaatgcgt catcccactt acggcatctt tagcattttg cttttcagtt
     2581 gccaatttag cttcaccgtt taagccattt ttagcatcag tcacttgagt taatgcacgt
     2641 gttatttcat ctgggttaag cgttggattt gtcgtttgat tgataatacc ttccgcttga
     2701 gacactgcat ttgtatatgc tgtttgctta tcggcatcag catcatgata gttctcactt
     2761 gctttgacag tatctttgtt tgcaatacct tgtttcaagt tactcattgc tgtattcaca
     2821 ttttgtgcat tttgtttagt ttgttcaact gtagctaacg cttgtgcttg attgatttgg
     2881 ttacgtaatg catcacgttg tggttgattt aaatcgcgta acgtatcaag atttgctaaa
     2941 gcttcttgtt tcgcttgtgc taatttttca tcaccgttta atgcatcttt cgcttgattc
     3001 atagttgtca ctgcttgtgt tactgtatca ggcgtcaata caggtgttgg tatgccattt
     3061 gcgatttgtt gcgcttggtt agccgcattg ttatatgctt gttgtttgtc ttgatccgct
     3121 tgtgtaaagt caactgactg tggtacttga ctgttcgctt gaatttgttg tttcaatgta
     3181 cccattgtat tatttaacgc atcagcattt tgcttaatag cattaacacc tgtaacaagt
     3241 tctgcatgcg acacttggtc ttttaatgct gttttttgtg gttgatttaa gtttggtaac
     3301 tgatcaatgg ctgtatttgc attgtcttta gcaacttgta agttatggtt accgtttaaa
     3361 tcacccttag cttgattcac ttgttgtaac gcttgagcca cttgttgtgg atccacgttt
     3421 gcatttggtg taccactaat tatttgttca gcatgtgcta ccgcattgtt gtaagcattt
     3481 tgcttatcag tatcagcatt gacaaagtta ccatttgctt tagtttggtc tttatctgca
     3541 ataccttgtt tcaattgtgt cattgcttga tttaaatctt gtgctgtttg cttaatcgtg
     3601 tttacatttg caacagtttg cgcagcatcg acttgttgtt ttaatgcatc tttttgcgct
     3661 tgatttaaat catttgcatt tgtaatcact tgtttcgctg catcttttgc acgttgtaca
     3721 ttgtcattac cattcaatgc ttgtttcgct tcgttcacac gttgcatcgc ttgttccact
     3781 tcagtttgac ttgcattgct gccatttgct ttagataaaa taccttctgc atgtgaaacc
     3841 gcattagtat aagcatcttt cttagcttga tctgcatcag taaagttaat gctatttaat
     3901 gtctcagttt tatcttgtaa tgcattgttt aagttagtca tagcattatt cagattttga
     3961 gcattttgct taacattatt aactgttgca atatctggtg cttgttcaac ttgagttgtt
     4021 agcgcttgtt tttgagcatc atttaaatga tctagtgtac caagtgttgt cttagcatct
     4081 tgtttggcat cagctaattt ttgattaccg ttaagtgctt gatttgtgtc attcacttta
     4141 gttaatgctt gttgaattgt atttggatcc attgttggat ttgttgtttg ttttaacaat
     4201 tcttctgctt ttgttactgc attatcatat gctgtttgct tgtcagtatc agcatcgtga
     4261 tagttctcgc tacctttaat ttgtgcttta ttcgcaatac cttgtttcaa ttgtgtcatc
     4321 gcgtcattaa gcgttgtcgc cgcttgttga atagcattga cgtttggtac aagtgttgct
     4381 tgcgtgattt gtttgctgta ttcatcacgt tgcgcttggt ttaagtttgg caattgatca
     4441 atagcatgtt gaacattttg tttcgccgtt gctaagtttg tattaccatt taaatcattt
     4501 ttagcttgcg taactttatt taacgctgca gtaatttcgc taggtgtaac gacaacatca
     4561 ggcgtagcac taattaatgc ttcagctttc gctactgctt gattatatgc attttgctta
     4621 tcaggatctg cattgacaaa gttaccatca gcttttgttt gttctttatc tgcaatgcct
     4681 tgttttaatt gtgtcatagc attgtttaac tcttgtgctg tttgtttaac attgtttaca
     4741 ccagctacag tagttgcatt ttgaacttgt tgttttaatg cgtctttttg tgcttggtta
     4801 aggtcattag agctattaat taatgctgtt gcttcgtctt ttgcatgttg aacgttggca
     4861 ttaccattta atgcttgttt tgcagcatta acttgtttga ttgcttgttc aacttcagct
     4921 tgtgttgcat tgccgccatt agcttttgaa atgatatttt cagcatttgt aacagcagtg
     4981 ttatatgctt gttgttttgc ttgatctgca tcagtgaagt taactgtcgc tttcgtagca
     5041 tctttgtcag ctatcgcttg tttcaagtta cccatcgctg tatttaagtt ttgcgcattt
     5101 tgcttaattt gatttgcttc atcaacagta tgcgcgccat taatttgatc agtaactgtt
     5161 tgtttttgcg cattatttaa gttatctaat gaacctaatg attgtgacgc ttgttgtttc
     5221 gctgcctcta ggttttcatt accatttaat gcatttttag ttgtgcttac ttgtccagca
     5281 gcttgattga taacagtcgg atctaaagtt ggacttgtag tttgatcaat aataccttgt
     5341 gcagttgtga cagcattatt gtacgcatcc tttttattct gacttgcatc agtataattt
     5401 tggttttgtt ttgttgtcgc attatctgca atactttgac gtaatttgtc cattgctgca
     5461 tcaacattgt ttgctttttg ctcattacct tgtgcttctg caacagtagt cgattgttgt
     5521 accaattgtt ttaatgcctc tttttgtgca tttgttaaat ggcttaaacc gtcaattgct
     5581 gtatttgcgt gttgtttagc tttttcaagg ttttgagtac cattaagcgc tgcttttgta
     5641 gcattcactt gattcatagc tgcttcaact tgatctttag gcacgttcgt acctgtagat
     5701 ttatttaaaa tattttcagc attatgaacc gcttcattgt atgcattttt cttctctgga
     5761 tctgcatctg caaagttttg actgccaagt gtagtgtctt tatcattcaa gctatttttc
     5821 aagttaccca tcgctgtatt cagttcctga gcggtttgaa tggcttgcgt tacttcagct
     5881 acagtgtgcg cttgattgat gtttccagta acagcacctt tttgtgcatt gtttaagtta
     5941 tctaacgtag ataatgtttg gtttgcattg tttttagcat ctgttacttt tctatcacca
     6001 ttcaacgctt gtttcgtagt tgttacagtt gaaagtgctg cttcaacttg tgattggttc
     6061 gcatttgtac catttgcttg attaataata ttttcagcag cagttaccgc attgttgtat
     6121 gctgtttgtt tttctggatc tgcatctgta aagttaacac tttgtttcac ttgatctttg
     6181 tcttggattc cgttgattaa acgttccatt gcttgatcta attgttcagc tttagttttc
     6241 acttgattta ctgtgctaat atttggtgca tttgtcactt gcgtatttaa atcttgcttt
     6301 tgagcattat ttaaatgact taattggttg atgttagcag tcgtttcttg ctttttattc
     6361 gctaagtttt gtgcaccatt aagcgcagtt ttgttagtgc tcacttgatt agctgcttgt
     6421 gttactgcag atggatcaag tgtcggctga ctcgttgcat taatgatatt ttcagcattt
     6481 gtaactgctg tattgtatgc attttgttta tctctatctg catcaacata tggttgactc
     6541 gcttttacat catctttatt cgcaatacta tttcgaagtt gattcattgc attatcaaga
     6601 tttgtcgcgt tgtctttcac actttgaacg ccagttactt gtgtcgcgct atcaatttga
     6661 ccagtaatac tttgtttttg tgcatcagat aaatgtgtca tttgacgtaa tgcatcttta
     6721 gcttgttgct tcgcagttgc taagtttgta tcaccgttta aacctgtttc agcattatta
     6781 acacgttgtg ttgctgctgt aacatctgct gcatttgtaa tcacattagg cgaaccattt
     6841 acaatgtttt tcgcagcatt atatgcatca gtataagcac cttgcttatc aggactcgcg
     6901 ttagtgtaat taccactagc tacaattgtg tcatgatcag caattgcttg ttttaattga
     6961 tccatcgcat tattaagtga tgtagcacta tttttcagat cagttacacc tgatacacgt
     7021 tgcgcagcgt tcacttgttg ttttaatgct gttttttgtg gtgtattcaa atgtgtcaag
     7081 ttatcgatag cttgtatagc ttcagtttta gcgcgttgta agttcgcgtc accgttcaaa
     7141 gcattttcag tagacgttac actttgaatt gcttgttcaa cagcttgctt atctttattc
     7201 gcaccgtgat ctttatttaa gtaagattca gcttgtgtga tagcattatc aaatgctgtt
     7261 ttcttagttg gatctgcgtc gatgtaattt tcgctcgctt tagtttgatc tttatttgct
     7321 atagctgatt gtaatcgttg cattgcacca tctaagtctt gtgctttcgt tttaacacca
     7381 tttacaccgt tgactgttgt tgcgccttcg atttgtgatg ttaaatcttg tttttgtgca
     7441 ttatttaagt gtgttaatgt acctaagttt gctttcgcat ctgattttgc ttgtcttaca
     7501 tttgcgtcac cgtttaaagc attcttagca gtcgttactt gatttaatgc agcttcaact
     7561 tgtgctttcg tcatattttg accgtgtgct ttatctaaaa taccttgagc attcgtaaca
     7621 gcatttgtgt aagcatcttt cttaccttgg tcagcatctg taaagttcac ttgttgttta
     7681 acagtgtttt ggtcatttat accattttga agttgaccca ttgctgtatt taattcatta
     7741 gcagtatttt gtgcagcagt tacgcctgct actgtcgttg cattgtcaat ttgactagtt
     7801 gctgcagttg attgcgcatt attcaagtta ctatatgaag ctaatgcacg tttcgctgac
     7861 tcttttgctt gagcaacttt attatcacca ttcaagtcat ttttagcttg attcaattgg
     7921 tttagtgctg cttgaacttg tgtttcattc gcgttgctgc cattagcatt agtaattgct
     7981 tctgcttgtg taaccgcagt atcatacgct tgttgttttg gttgatccgc atctgtgtaa
     8041 ttgacactac gtttcgtatt atccttttca gcaagtgcat gtttcaaatt acccatcgct
     8101 gtgtttaacg atgttgcttt atttttagcc gctgtgacag ctgcaagatt tggtgcttga
     8161 tccacttcag catttgccgc agttcgttgt gcattgttca agtctgtcaa acgaccgata
     8221 tctgatttcg cagtttgttt tgctgctgct aatttttcat caccgttcaa tgcagacttc
     8281 gcactgttca cttggctcgc tttttggtta attgtatcag gattcatttc agggttattc
     8341 gttgcactaa taataccttc agcattagtt accgcatcat tgtatgcatt ttgtaaatct
     8401 gcattcgcgt cttgataatc ttcgcttgat ttagtcgcat ctttagaagc aatactttgt
     8461 cttaattgat tcattgcttg atctaaagta ccggcattag cttgaatacc ttgaacacct
     8521 gcaacagtcg taccactttc gatttgcgat gttaagtttg ctttttgagc atcagttaag
     8581 tgtgacattg tcgctacttg ttgtttagct gtgttcttcg cttcatttaa tcgctcgtca
     8641 ccatttaatg ctgttttagc agtattcaca cgttgtaatg cttgttcaac agctgcttta
     8701 ttgtcatttg aaccagctgt tttatctaat aacgttttag ctgctgttac agcgtcattg
     8761 tatgcagttt gtttttctct atctgcatca gtatatttct gagctgcttt tgtagctgct
     8821 tcatcattaa taccattttg taagttgctc attgctgtat ttaattcaga tgccgttgta
     8881 gacacttgat ttacacctgc aactgttgtc gcaccttcaa tttgtgattt caatgcttct
     8941 ttttgtgcat tattaattga tgttaggtta ttcaatgcat ttttcgcagt tgtcttagcg
     9001 ttcgcaacat tttgattacc gttcaattcg tttttagcac gttgtacatt ttctaacgca
     9061 gtttcgacac cgtcttttga agtatttgga ccttgtgctt tatttaaaat ttgttcagct
     9121 tgcgtcactg catttgtata tgcattacgt ttcgcttcgt cggcatcagt gaagttaaca
     9181 ccttgcttaa tcgtattctg atcttgaata ccatttttca agttcgtcat agctgtattt
     9241 aatgcatccg cattattttg tgcttgtgtt acttcattaa catgcgttgc accttcgatt
     9301 tgacgtttca ctgcatcttt ttgagcgtca gttaagtcac ttaagccgtt caaatgttgc
     9361 ttcgcatttg tttgcgcagt tcttaagttt tcttgaccgt ttaacgcttg ttgtttagct
     9421 gtcacttggt ctttcgcttg attaatttct tgcgcattca ttgatggact agttgtttga
     9481 ccaatgattg cttttgctgc agtgactgca ctgttgtagt cagtttgttt gttttgactt
     9541 gcatctgtgt agttttgacc tgctttaatc gttgcttcat tcgcaatgct atctcgtaga
     9601 cctttcattg cagtgtttaa tgtttgtgca ttatcacgaa cagtttgaac atttggcaac
     9661 gtcgtcgctt gacccacttg ttctttaagt tttgcttttt gcggaccatt taaagaagtt
     9721 aaaccatcaa ttgcagtgtt agcattttgt ttcgctactt ctaaattatg attaccgttt
     9781 aactgcgtct tagcattcgt tacttgcgtt gctgcatttg taacatctgc tggtgttaac
     9841 gttggtgttg gtgtaccact aacgatattt tcggcagctg taactttttc atcatatgct
     9901 tgacgtttat tcgcatcagc attgacatag ttaccactag cttttgtctc agctttatca
     9961 gcaatggcac gctttaaagc tgtcatcgca gtatttaatt cagtcgcagt atgttcaaca
    10021 ccatttgctg cagatacacg tcctgcactt gttacttgtg cttttaatgc ttctttttgt
    10081 tttgtattta agtccgaagc atttgtaatc gctgtgttag cagcctgttt cgcacgatct
    10141 aagttttgaa taccgtttaa tgcagtattt gcttgtgtaa cagcttgcat tgctctttca
    10201 acatctgctt taggtgtatt accgccagct gttttattta aaatagttgc tgctgcattt
    10261 actgcttgag aataagcagt tcgtttagca tcatcagcat cttgataatt ttgactttgt
    10321 aacgtcgtgt ctttatcacg aattgatgtt tctaattgac ccatagcacc atctaattgt
    10381 tgcgctttgg ctttaactgt attaacacct tcaacatttg ttgcttgtgt aatttcattg
    10441 tctaacgctg tacgttgtgc attattaatg tgtgttaatg tacctaacgt ttgtttcgca
    10501 gctgctttag cttcatttaa tttcgcatca ccgttcaacg ccgtcttcgt actgttcaca
    10561 ttttgcaatg cttgttcaac tgctgctttg tctacatttt gaccactagc ttttgttaaa
    10621 attgctttcg ctgcatttac tgcttgatca taagctgatt tcttacttgg ctctgcatct
    10681 aggtatttct gagtttgttt tgtttgtgtc tcatcattga taccattttg taaactatgc
    10741 attgcgttat ttaattctgt tgcttttgca gtttcttgat ttacaccagc tactgttgtt
    10801 gcaccatcaa tgctacgcgt taacgcatct ttttgtgcat tgttaattga tgttaagtta
    10861 ttcaagttgt ttttcgcagt tgtcttagct tgagctaagt ttcgcgcacc atttaatgcc
    10921 tgttctttag ttgtcacttg tgatgttact tgcgtaatag tatttggttc catcgttggg
    10981 ttcgatgttt gattaatgat tgcttttgct gcagtaactg cactgtcgta ctcgttacga
    11041 ttatttggac ttgcgtcagt gtagttttga cctgctttaa ttgttgcttc attcgcaata
    11101 ctatctctta agcctttcat cgctgtattc aacgtttgag aactattttt aacagtttga
    11161 acaccatcta atgtagttgc actttgaact tgttctttta attttgcttt ttgtgcatta
    11221 ttcaattgtg ctaagccgtc aattgtattg ttggcatgct ctttcgctac acgtaagttg
    11281 ttatcaccat ttaatgctgt tttagccgca ttgacttgtg atgccgcact atttacgtca
    11341 ttgactgtta atgtcgcatt cggtgtacca ctaatgattt ttagcgttag tcacttttga
    11401 atcatacgct tgacgttttt cttgatcagc attgacataa ttaccgcttg cttttgttct
    11461 ttctttatca gcaatagctg ctttaagtgc tgtcatcgca ctgttcaatt cagttgcagt
    11521 gtgttgaacg ttatttgcat cagatacacg ttgtgcattg ttaacttgtg tttttaatgc
    11581 atctttttgt ttttggttta agtcatgtgc gttgttaatt gtgttcgtcg catttgtttt
    11641 agcttgagct aagttttgtg caccatttaa cgctgctttt gttgtattga cttgatttgc
    11701 catgccatta atcgcattag catccatatt tggattgttc gttgcattaa taacaccatt
    11761 tgcattattt acagcagtat tgtaattatt tttgttgctg tcagatgcat caagataatt
    11821 ttgacttgtt ttcgtcgtat tatcattttg gatacttgta cgtaatgcac ccatggcagt
    11881 atttaacgta ttacctttat ctttaacacc atttacacct gctacatttt gcgcttgttc
    11941 aacttgatgc ttcaagttgt ctttttgtaa ttgtgttaag ttaggtaaac catcaatcgt
    12001 atttgttgct gaagttttcg catttcttaa gttgtcagca ccatttaaag ccgctttcgc
    12061 tcttgtaact gcatttaatg cattatcaac gtctgcttta gatgtgttac caccagtttg
    12121 tttatttaaa atgccttcag ccgctgtgac agcttgcgta tatgcatttc gttttgattc
    12181 atccgcatca agataatttt gatttcttaa tgtcgcatct ttatcattga ttgaaccttg
    12241 taagctattc attgcgccgt ctaatgtatt ggcatttgtt tttacagtat taacgccatc
    12301 aacagtcgtc gcttgattga tttggccttc taagtcagta cgttgtgcat tcgtaatatg
    12361 gtttaaagtg cctaagtttt gtttagctgc cgctttcgct tctgccagtt ttgcatcacc
    12421 attcaatgca tctttcgtac ttgttacttg ttgtaatgca cggtcaactg ctgctttatc
    12481 tgaatttgaa cctgtttgtt tatttaaaat tgctttcgca gcagctacag cttgatcata
    12541 agcagttttc ttactttgtt cagcgtcacg atatttttga gtttgttttg ttgcattttc
    12601 atcatcaata ccatgttgta attgacccat agctgtatta agttcatttg cagtttgttg
    12661 gatacttgtt acatttgcaa cacgttgcgc acttgtaact tgtgctttta acgcatcttt
    12721 ttgcgcttta tttaagttag tagcaccatc gatggcattt gttgctgttt gtttcgcttg
    12781 cgttaaatta tgtgtaccat ctaatgcatt tttcgttgat gtcacttgtg tagcgatttg
    12841 gttaattgca ttagcatcca tatttggatt gcttgttgca ttaatgacac cattagcact
    12901 atcaacagca ttgttatagt ttgttttgtt acgttctgta gcatcaagat agttttggcc
    12961 atttttcgta gctgtgttat cttgtatgct atttcttaac gtacccatag caccatttaa
    13021 tgtgttggca cttgatttaa cagtatctac acctgcaaca ttttgtgctt gttgcacttg
    13081 ttgtttcaat ttatcttttt gagcagttgt taaatgttga agtccgttta tagtagtgtt
    13141 tgcatttgat ttagcttgct ctaaattatg gttaccattt agggcacctt tcgcattagc
    13201 aacttgtgac aacgcgtttt caacggcagt tttgtctaaa tttgatccac tatttttatt
    13261 taaaatattt tctgcgttcg taacggcttg agtataagca gttttcttat ctgaatcagc
    13321 atcatgatag ttttcacttg ctagtgtatt tgttttatca ttaataccat tttgcaagtt
    13381 agccatcgct gtattcaatt gtgtactcgt attagataca gcttcaacac cagctacagt
    13441 tgttgcttga tcaattttag ttgttaagtc acgtttttgt gcattattaa ttgacgttaa
    13501 gttatttaat gcatttttag ctgcattctt cgcatttgta acgttttgat caccattcaa
    13561 tgcattttta gcacttgaaa cattttgaat agccgcttca acatcttgtt tagacgtatt
    13621 tgcaccttgc gttttattca gaattgcttc agctctgctt accgcatttg tatacgcatc
    13681 acgtttagct ttatctgcat cagtaaattt aacactttgt ttaactgtgt tttgatcatg
    13741 gatagcttgt tccaagttac ccatttgcgt attcaactca gttgctgcat ttttagtagc
    13801 agttacctca ctcacatgac ctgcacgatc aatttgtgat gagatggcag atttttggtt
    13861 atttgttaag tgtgataatg tatttaagtt ttgcttagca gtgttttgtg catttcttaa
    13921 gttttcagca ccgtttaaac catttttagc attattcact tgtgttgtag cttgggtaat
    13981 cgcactagta tccatagtcg gattgttagt ttgattaatg atacctttcg catttgacac
    14041 agcgctatta tatgttgatt ggttattcgg acttgcgtct gtatagtttt gacttgtttt
    14101 gactgttgtt tcgttagcaa tactatctct taagcctttc attgcattgt tcaatgcttg
    14161 tccatttgtt tgaacagttt gtacgtcttc taatctattg gcttgtccca cttgttcttt
    14221 taatttagct ttttgaggtg tatttaattg tgttaatgca tcaatagcag tattggcgtt
    14281 ttgttttgct tcacgtaatc tttcgtcacc atttaattct tgtttcgcgc tgtttacttg
    14341 attagctgca gctgttactt ctgaaggtgt cgtaacaacc gttggcgtac cgctaataat
    14401 atgttcagca ttggtaactt tagttgtgta agcattttgt ttagtgctat cggcattaac
    14461 atatttactg cttgctaacg tattcgtctt atctgcgatg gcatgtttta atgtgcccat
    14521 tgccgtgttc agttcagtcg cattgtgctg tacatcttgt gcattagata cgcgttgagc
    14581 accattagct tgtgctttta atgcatcttt ttgtttttga tttaaatcag atgcgccatt
    14641 gattgctgta atcgctgctt gtttcgcatt gtttaagttt tgcgtaccat ttaatgcatg
    14701 tttcgcatta ttaacattat taagtgcttg ttcgactgct gttttcgctg tattcggtcc
    14761 agtttgttta tttaaaatgg tttcggctgc tgatacagct tgattgtatg cattacgttt
    14821 ttgctcatca gcatccaaga agttttggct cgctaatgtt cctgacttat cgttgatagc
    14881 cgtttgtaag ttacccatag caccatctaa actattcgca ttttgtttaa cagattcaac
    14941 accagctaag tttgtagctt gtgaaatttg atttgttaaa tcattacgtt gagctgtagt
    15001 gatatgcgtt aaagtaccta aatgttgttt cgctgcgttt tgagctgcaa ttaattttgc
    15061 atcaccattc aatgcatctt tcgcattatt aacacgttgt aatgctgctt caactgcatt
    15121 ttgcgcagtg tttggacctg tcgatttatt taaaatcgct ttcgctgcag taatagcatt
    15181 atcatactct tgttgtttat ttgtatcagc atcacgatat ttctcagatg atttcacttg
    15241 agattcgttg ttaataccat tctgtaagct agccatagct tggtctagat gttgcgcatt
    15301 ttgttttaca gtatcaacac cactcactct tgtcgcacta gtaatttgac taatcaaatt
    15361 gttcttttga gcatctgtaa tacttgtcaa tgtgtttaag tacgttttcg cattttgttt
    15421 tgcagcagct aagttttcat caccgttaag tgccgtttta gaactattca cttgctctgc
    15481 tttttgtgta atcgtacttg gattcatttc tggattacta ttagcattaa taatcgtttc
    15541 agcagcagct actgcgttgt tatatgctgt ttgcttatca ttattagcat ctacgtaatc
    15601 ttcacttgct ttagtcgcat ctttgttggc aatactttgt cttaacgtat tcatggcttg
    15661 atctaatgta ttggcatttg attgaaccgt ttgaacacca gcgacagtag taccactatt
    15721 aatttggttt gttaaattcg ttttttgtgc agttgttaaa tgcgttatat tatttaactg
    15781 ctgttttgct gtttgcttcg cttgatctaa taaacgcgta ccatctaagt tatttttagc
    15841 agaattcact tgattcatcg cttcagtaac ttgatctttc gttttatttt gaccatttga
    15901 tttatttaaa atatctttcg cagcttgtac cgcatttgtg tatgctgttt tcttactagg
    15961 tgtcgcatct tgatagtttt gactattaag cgtcgtttgt tcatcattga ttgcaccttg
    16021 caagttaccc atcgctgtat ttaaatctgt accttgttgt ttaacagtat ttacgccagc
    16081 aatatttgat gcagcattaa ttttagattt aacatctgct ttttgtgcat tatttaaatg
    16141 tggtaatgca tcaattgctc ttgcagcatc tgttttagat tgtgctaatt tttcataacc
    16201 atttaatgca tttttattag aagtaacagc tgaagttgca cgattaacat catcaacaga
    16261 catcgttgga tttgttgttt gattaatgat tgtttcggca cttgaaactg cactgttata
    16321 tgcattttgt ttagctgtat ctgcatccgc ataatcttct gtacgtttca cttgatcttt
    16381 atctgcaaca gcttgtctta agttacccat tgcactattc aagtttgttg cattttgctt
    16441 aattgtatta actgcatcaa tttgatgcgc accattaatt tgcgattgta agttttgacg
    16501 ttgtgcatta tttaaattgt ttaaatgacc taatgcagta ttcgcttctt gtttcgcagc
    16561 atttaactta gcttcaccat tcaatgcatg ttctttactt gtgacatttg ataaagcatt
    16621 gttaacatca cttggtgtta taactggatg ttgtgcatta ccattaataa tgtcattcgc
    16681 atggttgtat gcattgttgt aatcattttt cttattagta tctgcgttga cataattatc
    16741 actttgtacg acttggttat gattagcaac gccacgtttt aaacctgtca tagcagtatt
    16801 taagctttga gtcgtttgtt taatatcatt tactgcttgc acgttttgtg cactattcac
    16861 ttgttgtgtt aatgcattct tttgtgcttg gtttaaatca cttgcatgcg taatcgcatt
    16921 tgttgcttct gttttcgcac gttgtaagtt ttgttgacca tctaaagcat ctttcgtcga
    16981 tttaacagat gctgcttttt ggttcactgt gttaacatcc atcgttggat tagtcgtttc
    17041 tccaatgaca cctttagccg cattaactgc attatcatac gcttgtttat tagctggtgt
    17101 tgcgtcagtg taattttgat ctgatttaat tgtattatta tccgcaacac tgtcttttaa
    17161 tttcgtcatc gcagtattta aagccgtaat gttagactta attgtttcaa gcgcagcatg
    17221 attttgagca gcattaattt gttgcgtgaa attattttgt tgtgcttggt ttaagttaga
    17281 tgcaccatgt aatgttgtta acgctggctg tctatctaat gttaaacctt gacgtgctgt
    17341 atttaattga tccttagctt ggtttgcctc tgtcacttta tcattgatat tttggacagt
    17401 tgggttgcca ttcaacactt gattaatttc agttaacttt tgacgcgctg cttgtaattt
    17461 ttggttgtac gcatttaacg aagcggtcgt catacctgtt gtatccgttg gttgattaat
    17521 gctttgttct aattgcgttt tcgcagtttg aagcggcgct ttatctggtg ttaaagcttg
    17581 acgtgcatga tctaaatcag atttagcttg atttgctgta gacgtatttg tattaatttg
    17641 ttctacagtc ggtgaacctg ctaatacttg attgatttgt tgaatcttat tacgtgcagc
    17701 tgttaacttc gcattgtatg catttataga gtcttgtgtc ataccagttg tacttgtttg
    17761 cgtgtcaata ctatgttgta gttgattttt cgcattttct aaaggcgctt tatcgactgt
    17821 taagccatta cgtgcttgat caagtgctga tttagcggca ttcgctgctg tcacgttttg
    17881 acgtattgtc gcaacatctg gatgtgaggc taatacacga tcaatttctt gaattttagt
    17941 tctagctgct gaaagttttt cattaaatgc tgcaatagat gcgcttgtca taccagtcgt
    18001 actcgttggc tgatcaatat cattttgcaa ctgagttttt gcagtttgta atggtgccaa
    18061 gtctggagtt aatccagcaa ttgcttgttt taagctatta tatttttctt ctacttttgt
    18121 tttttctgcg gcaatttgtt ggtcagtcgc atcaccattg ttaataacat tttgtgcatt
    18181 tgttgattct gtttgacccg cacgtttagc attttcatat gcttggattg atgattgtgt
    18241 cataccatca gtagttactg atttattgat ttcttcatca agtttcgtct tagcagtttt
    18301 taaagcacta ttatcagcta aaggtactaa ttgattaatt gcttgcgtta atcgctcatt
    18361 gacacgattt acatttgtta acgcagattg cacttcttgt actgttctta ttggcttttg
    18421 aataatagca ttagcgctat ttttagcact tgttaagtca ctttgaagtg cacgaatcga
    18481 attattgtaa gcagtaatac ttgccggctt cttaccagtc gttgtacctg tgcgattcaa
    18541 ttgttgcact gcttgctcta aggcatgtgt atctgcagtt aaatcatgtt tcgcttggtt
    18601 taatgctgtt aatgcgttat cgacacgatg tttttcatct gaaatttgtt gtgcagttgc
    18661 atcgccattg tcaataacac gttgagctgc agttatttca gtttctgctt cacgcttctt
    18721 cgcattatag ttatcaatac tttgttgcgt cataccagca gttgatggta cttggttcac
    18781 agaactttgt aagttatttt tagacgttac taattggcta ttatcttctt tattttgaag
    18841 taatgcttta gcttgatcaa tcttagtttg tgctgcacga actttagtta gtgcgtcaga
    18901 aacttgttgt ggtgttgcac gctcattatt aatcacttgt tgtgcttctg ttttcgcagt
    18961 attgatttgt tgttgcgcat tatgcattgc attattgtac tgcgtaattg tacctggctt
    19021 tttaccttca gtgcttactg gatcatctaa atgattttta gctgtgatta actcacgttt
    19081 atccgctttt gtgaaaatgg actcttgtac ttcttcagta ctaccatcat tgtaagttac
    19141 tgtcacagga atcgtcgttg tgctaccacc agctaaatta gtaggcattg ctgtgccatt
    19201 tttaatcgtt gcagtacgtt tattagcaac ttgaactgca ttgttaattt cagctgctgt
    19261 tacatttgaa ccataatctt tcacaatttc agttgtgttg acagtatgag ctgccggtgc
    19321 agttaatgta cttggattac tacttactga gtgacctgta cctgctttcg gagtaattgt
    19381 gattgatgaa tttggtttta tagtattggc attgaacgtc actttaccag tttgtgcatc
    19441 taacgttaca tagtcaggct tattcgcaat tgtccattga ttattttgac cacgaacaac
    19501 attaattgtc ttactatgtt ctgcaccatt acccactttt tcagtgtaag caatatccat
    19561 tgcttgagtt ggattaatta aatgtcctga tggattatta ggcgtgatat caatatgacc
    19621 attttgccaa atcttagtag tcgcttggtt cggttgtggt gcgacaactg tgaaatcatc
    19681 actacgttgc tcatcactca ctgtctctcc gcttccttgc gttgcaacaa cttgaattgt
    19741 atcagcaggg ttgaaagtac ctgctgcaac agtaatacca ttattagttc cagcaatacc
    19801 tgctacagtt gctgcagatg cttctttcac ccatggactc gtattattgc gacgtgtaaa
    19861 tgtcgtcaca acgttaccat tacgtttaat aactaattta tcagcgtatg tcgttacgtt
    19921 accggcatgt gtattcactg tttggtttgc tccaggtgca attgtaatcg ctcctgccgc
    19981 tgtttcagtc acagttggtt tcgctggttg cacatctttt actacaaatt tcgctggtaa
    20041 agatgttgca aaagtatgtc cgttatagat gacgtcatat tttgcgttaa cgactttagc
    20101 cacattcggt ttattcatag ctgaccagtt tgcgtcattt gtacctgtag tatcacgatt
    20161 ccatttatac gtaaatccat ctgttggtaa accagtagca ttttgcatat gtgcatatcc
    20221 tgatgcttgc gtaccacttg ctaaagtgcc tccaaccgtt gtcgtataag tagtttgagg
    20281 gaattcaaat tgatatacat taacagtaac aggaactcgt ttagcagctg aaatacctgg
    20341 atatgtgaca tcgacattta aatgttgcac gcctgcttgt tggttatttg gttgttgtct
    20401 atttgcccat gctgcagtga taccatttgt gtttgtattt ggatcaaatg taatgtagtt
    20461 catcgcatcc gttccattag tcaaattttg acctttcaca tcacgtgatg gcgcctttgc
    20521 attagcaact ggataaactt tgactggaac ttcaacatta cgcgtacctt gaccattagg
    20581 taatgttaca accgcagttt tatgagtgtt accgactgta ttcttccatg tatctggact
    20641 atcatgccat gcaaccgttg ccccatgtgg cgggttttga ataaatcttt ctacgtgtcc
    20701 gaaatcaaaa ccgtcgccac ctttaataaa tacagcgcct tcagtagttg cttgtaattg
    20761 tggtgtcact gttactgttg cactgtcatt tgaatcaaca gattcatttc ttgttactgt
    20821 aacaacttga ccatgttcgt cttgcgtcgt atacgtcaca ttgttcattg aaattgaaga
    20881 ttttgcttta attccgccat ttggtaacgc gtcacttact gtcacaaccg aactaaaacc
    20941 gctaccatga gtaatatttg tgacatttaa tggtgtatta tctgctttaa ataattttac
    21001 tgacgagtta tttaatacgt tattaacttt aatttcttgg tttgtaagac ctgctttata
    21061 tgtcacagag tttgcatcaa ttctaggtgg gtcaggttta actttagata aaatagttaa
    21121 atcttctgtt tgtctattat catatgtcac tctaataaga cgagtagata tgcctacaac
    21181 atctttgtta ggaccatatg ttccaacaaa ttggaaattc atatgttgcg catttgtcga
    21241 ccaagaatta tttactggct taacatattg tttcgcatca tacatatctg aaacacctgg
    21301 gtataaaaca cctctggctg tttcaaagac atgtttcggt acagttctta ctactttata
    21361 tgttgctgtt ttcgtaatcg gcgttgtttc gccatcaatt aagatatgtg cagttacagt
    21421 tatatcttca ccaatacgtg tattatcttt atttggcgct tgtccactta cccatgtaat
    21481 agttgcatct gcaatgtcac taccattaga taacttaaag taatctgatg cactagaacc
    21541 attacctgct gggaagtctt ggccttgtac agtgtaatgc gaatgtgcaa cgatttctgg
    21601 aatgacatgc tttacaggta cagtcactgt tgatgttgtt ccatcttgat aagtaacagt
    21661 tactgtgaca ttggcattat ttccagtacg actgacatta ctaactgttt tactagtgat
    21721 ttcattcgca cttgctcttg cataacttct atttggtact gtttcagtaa acgttaacga
    21781 attaataatt gtcgtttgat cagcttgtga tactgtcgca ttattcgaaa tattggcaat
    21841 tctcacagga ttagcagccg ttgatgaagt accaactcga tatttatcac gcaaaggttt
    21901 cactgttaca ttgaacgaag ttgtagctgt attgccgctt gtatcagttg ctaataaatt
    21961 gattgtctta ttagttgctg atgtcacatt tggtgccgtt gcagaaacat gttgatggtt
    22021 attatcaaca gtacctgtaa tttgtgatgt atttggtaca gttacagatt gcacaccaaa
    22081 gttatcattc gctgtaatag tatttgtaaa tgtttcacct gagaacactt gatgattagt
    22141 gtaattacct actgaaattg ttggattcac taagtcactt ggtacaaaat aaatgttaat
    22201 agcgtcagta gtatttcctg tattttgatt taaatgttca acatattgtt ttggaccata
    22261 tggcgttaag tataactgtg ctttataaac tgcatcactt gcattatgtg tagaattact
    22321 ttttacaacg tggtcaattg taaatgcgcc agcaccatta gctgccggtt cgtttacgtt
    22381 aacaacagtt gagttactat ggtttgcacg agtatttgaa tttgtaacag gttgcccacc
    22441 ataaccgttt gaagggttga tgatgtctaa cacttgaatc acttgaccat tcaacgtaaa
    22501 ttgacgttga ccatcagttg tcgcatttga ttgtgaataa ccagtcgttc taaagttagg
    22561 tcttccgcca gcttctgctt gtgatttttc attaccagta atgttatttc gcaatccagg
    22621 cactgtagtt gttgctttta acattgttaa aatatcattc gtcgtaattt gagtacctaa
    22681 tgtagcatca taacgataaa ttaaagattt atggtcatca gaccatgata aaccaccatc
    22741 tgttggtctg tttgcaattt ttgcattcgt ccatgtcact gtataatctt gtgggaaatt
    22801 aacccaacgc aagaaattca tattagctag gtttgacgcg aatgatttcg ttaatcgacc
    22861 tttattaata tttactgtaa tagtacttac attagcacca ttaggtgtat ttgtaactga
    22921 aatatcacct tcggcaagcg taattacatc tctatttgca ttaataaatg cttgttttac
    22981 ttttgagatt tcatcagtag ttaaatcata tgttgatgta cgatatacac gttgatcgcc
    23041 ttctggttgt ttcacatcga tgattttcaa actaatatag aagtcttcac tatctttatg
    23101 atacgcattt gtagcagtta tatggtataa ctgcgtgcct gcgttcattt gactaacttc
    23161 ttgtgcagtt ggaatagttc tatcagatgt aatatttgta aatgtgccac ttggaatagg
    23221 ttgtccatta cttaaagtaa aatattgttt aatatcacca atactaaatg attgtccttt
    23281 agcaatcgtt accgttgctg ttttagcagc attgacagtt tggtattcag gtttcacaac
    23341 tggttcgtat gtcatcacat ttgtagcatc aagcgttgtc gatgagccat cacggtaatg
    23401 taatgtgaca ttaccattat tatcgacagt tactggatca gttgatgcta aatatcctct
    23461 tatattttgg tttttattca taaaggcagt aattatgctt tgcttttcat cattagatac
    23521 agcagtcgga ttgactacta caactttctc agtatttcct aatacaatcg gatgagcatc
    23581 ttcactaatt ttacctacat gaattgaaac atgtttagat tgactatcat ttgtcgtatt
    23641 attgacattg tctgtcgctg acactttaaa tgtaatatca ctgttaaatg cctgattcat
    23701 actcactcta cctgtaatag ataatgagcc attattctta tccgcttttg ttaaatttga
    23761 tgtccaacca ttcggcaatg tcgtaatagt tgtatttttt ataccagaat gtctatcaga
    23821 gacacccatt gtaaagttga cttcgtcgcc tcgatagtat ttggcattta ttccaacagg
    23881 attattgatt gttggtggaa tgtcatctgg caaaatagta acagcattac tcatattaga
    23941 tgcaactact ttattataat aaactactgc tctaatttgt ttacctacag gtggtatgaa
    24001 tacaacataa tcttgcggtc gtatagtaat tgtattatgc accccatcag gtgtaccagt
    24061 cgcaagtatc gtataaccag atggtatttg atctgcctca ctaccaccat tcgtagtttg
    24121 atttgttggt gcaactaaat aaaccaatgc cgatggatcc aacggtattc ccgaaatatt
    24181 aacaggcact ttttgtaatg ctgtacctct taattgctca gctgtcgttg taattgttgg
    24241 tgtatgtggt ttaacacgaa tttcgaataa ttgttcttta cgtccaaaac gtatcgttcc
    24301 aaagtaatcc cctggtaata agttaccaac aagttcaata ttgcgttctc tggcattatt
    24361 aggtctattt gtcgagtttt caatgtgtaa tgtacgcgga atacctgtaa tttgccaatc
    24421 tttatctgta aaattctcat tacttgttaa attaatacgt aatggttgaa tagatgttac
    24481 gctaccacct aaattcacgg aagcattccc ttggttacct gcatatacat agaaaactgg
    24541 atgcccagct tgttttgaaa atggtttttc agcaatattt tgagtatcgt catttttaaa
    24601 gaatttaata ttatgttgga tttcaggtaa taccgttaag ttaacaggaa ctaaagtttc
    24661 actattacca taagcatcag gatagtcgaa accaatcatt aatcttattg ggtttctagt
    24721 tcttgctgct tcttgtaatt tttgatcagt aaataattga cttaattgat attcatttaa
    24781 ttgttgggct ccacccggtc taaaagcatt agtatttgca ttattcgaat aaaatcctaa
    24841 cactttatta ctcggcgtct taacataact taaaggatca tcaacaaaat catctatatt
    24901 taggtttgta ctttctaata cctttttcgt ttgtacattt ccttgactca cttctacacg
    24961 tttagttgta cctatgcgat atgtacgatt aaccacttgt cttaaaccat taagacgttg
    25021 ttgatggtct tgcgttgatt cgacgtatag ttgactgtac ataaataatt gattgtactc
    25081 taaagcacgc ccacctgctg catagtacaa tttattaaca gttggacctt gtgttttaaa
    25141 tgaaattgta taacttgcat caccttgacc gatgaaagta taaactttag gaacacccgg
    25201 tgattcagca ggtttttgac cattaatata ttcaaaattt tgtctaccaa aagctttagt
    25261 agcaggtgtc gctccagctt cactaaaata atcactcgct ctagataaat cttctaaaga
    25321 ataaatatgg acagttggcc agtcatatat tacttggcca cttctatttc ttattttaaa
    25381 gtcatgtgaa cgatgaggat catttactcc atattcccac atttgttgaa gtggtttatt
    25441 tgcacctgct cctgctccat gactccattg tacatttgtt ccatctgaat taactgttac
    25501 aaagtcagtt cttcctactg gcacttggtc tgctggtaat gcaaaccaaa agatcatatt
    25561 ttgatgtgga gcatgtcctt tattaaactt aataacccat tggtacccgt ctccagtttg
    25621 tttcgctgtc ataagagcaa tttcctttga gtcagaggcc ttcaatgtat tccatggtgt
    25681 agttggtaaa ttatatggcg cccctttact agaagcattg atatatgtac caacaggata
    25741 gcccgaacca tcattagcat tttcaacata atatgatgaa tttgcatttt gatagtctga
    25801 tactgatcta ggctctgcag ctcttgactc aaccgaacgc gtttgaattc tatttgaacg
    25861 tcggctagtc tgttgacgtt gaggcattgt acgaattaaa gcaacagctt gttccaattc
    25921 tttgtatgca agttgcaagt ctttattgtt tattggatca ttactgccta ataacgtatt
    25981 aatcttatca aaaatgcctt ttacatagtt aaatgtgcca gaatctgcat tttcacggtc
    26041 aataaagcga taatcatgat aatttgcatc aaaaaacgct tgtaattcat ttcggtcatg
    26101 ttgtacgtta ccattatcag atgaatctga agctgttact acatttgctt catgattttc
    26161 tacatgagcc gctctattgt cgtttccatt tttattagca gattgacttt cgttttgttt
    26221 atgcttactt tgttctttat ctggttgtgt tgtcgcagcc gttgccgaat ctttctttgt
    26281 atttacattt tgagatgctg gttgttcatc attagtagta gatgattgcg ctactttttg
    26341 atctactaaa ttagcttgac taatatttgg ttgctcattt tcatgagtag cagataatga
    26401 ttgaccattt tgtgaatttt gagaattttg tacttgagat tctcgattct cagtctgttc
    26461 attattactt tgttgtttct gtttaaccac gcttgctggt tgatttgttt cagcagcatg
    26521 tgcttgtgat gtattgaatc ctaaaaatac caatgtcgca atgacagttg aaaatgtacc
    26581 aactgtatat ttacgaatac taaacttttg aattttatca cgataattca cagctattgt
    26641 tcactcctta tcttgttgtt atgtctctgt tgtgttgtga atgtatttac ttttgattgc
    26701 ttgtgtattg taatgctcat tccattctca tttaaaaatt taaaacgatg acgattcaat
    26761 acaatttcgc aatatatcca aaaagtattg aaacacatta caactatgtg ttgaacaatt
    26821 tatttatgct ccagaatata ataacacaaa atatattgta aggtaaattg aatttgtgac
    26881 aatttataat aattataaat aaagtagcgt aaaagagtaa taaaaaacca atccctatgt
    26941 tcatttaaaa taatgacaca taagaatcgg tttatatttt tgtttaatat tgtagcgact
    27001 tgtatgattt caatttaatt ctcaattatc ataattgagt gtcgttttgt ttaggcacaa
    27061 gtaacaaaat gataacgaat gataatattc ccatacctgc atttaaccat aatgcaatca
    27121 ttgcacctgt ataaatgttt gtcatatttg atacgattgc atatactgca ccactcaatg
    27181 cgacgccaaa tgctccacct aatgcagaag ccattttata gatacctgca gcaacgccta
    27241 ctttttctaa cggtgcattt gcaattgctg tatctgttga tggtgtagca tatatcccta
    27301 gtcctaaacc aaagaataaa taacctataa tacaacaaat gacatagaat atttctggca
    27361 agaaagttaa tgaaatgaga cattctccga caataagaac tcctgttcca attaacattg
    27421 gtttcttgca tccgagtgtt tgaagtaact tttcaccaac acgaatcata attagtacca
    27481 ttactaaata agtgattgat aaacttcctg cttgcaatga agaatatcct aaacctcttt
    27541 gaacaaatgt attggctact attaatgttc ctgcaacacc atttaacaaa aagtttgaag
    27601 ctgttgcacc tgtgtaagct ttatttttaa ataatttaaa atcgattaaa ggatttgtag
    27661 cacgcttttc aagaactata aataaactaa aagatccaat tgcaatagct aataaagtaa
    27721 taaaaagaag tgaggttaca cctaattctg atcctttagt aattaaaata tttaaactga
    27781 ggagcataat gactaaaaga accagacctt taatgtcaaa tttatttaga gaaatcgatt
    27841 tagatttagt ttcaggtgtg cctttaataa gaaacagtgc aattaatgaa attataattg
    27901 ataggatgaa aatccaacgc caacctaaaa gcgttgcaac tgcacctcca aaaaatgaac
    27961 aaacaccaga gccgccccat gagccaattg accaataact taaagcgcgt tgtctatctt
    28021 tcccaatgta atatgactta ataatagaca aagttgcagg cataatacat gctgctgaaa
    28081 gtccttgaat taatcttcct ataataagta ataaaggaat atttgtaata atgattaata
    28141 atgaacctaa tatatttaag ataataccaa tgttcgtgag tttaattctg ccatatttat
    28201 cagcaagacc acctgctcct actacaaaca ttcctgaaaa taaagcagtt atactaacgg
    28261 cgatattaac cgttccaata tctgtattga aactatcttc aagtattggt acaacattaa
    28321 ccaatgattg tgcaaatagc caaaacgtta ttacacttag aacaattcct attaacaact
    28381 tattattgcc ttcaaatgcc tctcttgacg gcttttccat ctctatttgc ctccctatac
    28441 ttttgaaaaa cagacaaatt ccataacaga aatttgtctg ttccatagaa taattgaatg
    28501 gtttttgatt ttaatgtgta aaactttaaa tttattagta gtccatccat ttattctcaa
    28561 tgctagttat cttaccttat gctgcttttt gtttcttttt atagtaataa actggtatac
    28621 caagtgctgt tattagaatt ccaatgattg ctaatataaa ttgtgtaaac agtgtattaa
    28681 ttaatacaaa tgatcctgcc aaaatagcaa ttaaaggtat gatcggatat aacggtactt
    28741 tatatggtcg ttccatattt ggttcacgtt ttcttaaaat tattaccgca acaaatgaca
    28801 tacaatagaa caaccaaata acaaagatta acatatttgt aattgtatca aatgctccca
    28861 ttgacatcat gatgatagcg attataagtt gtataattgc gccaaaccat ggtgcgccag
    28921 attttgttaa ttttgcgaat aaatggctaa atggcaataa ttttctttca gccattgcat
    28981 atggtacgcg cataccagtc atagtatagc cattgatcgt accataaaca gaaattaata
    29041 taccgattgt aataatctta ccgccatttt caccaaataa tatttttgat gtatctgaag
    29101 ctgcatttaa attaccagca agtagttcta ttggcaacgt taataagaat gtagcgttaa
    29161 ttaataaata cacagccata atacaaccga taccaactga aatcgctaaa ggtaaatcgc
    29221 gtttaggatt tttaagttcc cccgcaacat ttcctacatg aatccaacca tcatatgcaa
    29281 acatagttgc taataaacca ctaccaattg ctgtaaagaa gccatttcct gaattacctg
    29341 tagttggaat taatgaaaaa gtgatatctc cagattgaaa aataccaaaa attacaataa
    29401 cgatgattgg aatcagttta attactaaag taactgattg taaaattccg cctgcttttg
    29461 aacctaggaa atttatcaac acaatagata acgcagatgc gattgctatt ggtattaacg
    29521 aacctataga taaatggaat aaattaatta gctgtgtcgc aaatacgata gacaatgctg
    29581 ctacgttagc tggaaaataa ataaatgatt gcgcccaacc tgataggaag ccccagaaat
    29641 caccgtatgt atattctata tacttcgtta agccacctgt ttcagggatt gcagcagcaa
    29701 gttctgctgc tgttaacccc gcacaaatgg taatgatgcc gcctaggaac catacaaaca
    29761 aggccattcc tgctgttcct gttacttctg ttacgtttga tattttaaag aatactcctg
    29821 aaccaataac tgtccccata acaatagcaa acgctgagaa gaaacctata tttttttgta
    29881 attctttacc atttgacata attacacctc atttttaaga ttaaatgttt taacctacca
    29941 cacccttgct tgtatctgca atattcagtc catgttcaat gacacctgaa actctagtta
    30001 agtcaacatt cccgcctgaa actaatgcaa caacattttt atcttcaagc catttattgt
    30061 ttatttttcc acttaaaatt gcagctgttg gtaatgcgcc tgcaccttca gtaataattt
    30121 tggcacgctg cattaaatct ttcatagcat gttcaatttc ttcttcagta acaagaataa
    30181 attcatctac taaatgttta actacttcat atgtttgttc accaggaact tttacatcac
    30241 aaccatctgc tattgtgcta tccactcgat gttcagttaa atctctctta tagaaagact
    30301 cagccatacc atgaacattc tcagattgaa caccgataat atgaattgaa gggttaaatg
    30361 attttaatgc ggtggcaata cctgcaatta atcctccacc gccaactggt acgatgactg
    30421 tattcacatt ccaaatatca tctaaaattt ctaaaccaat tgttccttgg cctgccatta
    30481 caaacttatc gtcatatgga tgaacgattg tcatgccatt ttctttcgct aattcttcca
    30541 tataaagtct agtttcgtta aagtttttac cttttaaaat aacctttgcc ccatagcctt
    30601 ttgttgcttg ttgtttcgct tgtggtgctg tttcaggcat tacaatcgtt gcatcaatgc
    30661 ctaataattt agctgttaaa gcaacacctt gtgcatggtt cccagcagat gctgcgataa
    30721 tgcctttttc tttttgttca tctgttaagt gattaatttt attgctagcg cctctaaatt
    30781 taaaagatcc tgtgaattgc atattttcta attttagaaa tacattccct ttagttatac
    30841 tttggcttaa atacattgat ttaattagag gtgttcgacg aataaatggt ttaatgcttg
    30901 ctttagcttc ttcgatatct cctaaactta caatatgtgc tgtttgtaat gtaactgtgt
    30961 tggttgtcat aataattaca tccttccgtt ttgtaaattt ttagtccaaa ctataatgct
    31021 atatttaaaa tattcatttc actcaatttc atttaaatta ctatctattc gataacattt
    31081 aatatttctt tataatctag gtcatgtgat gaagctaatc cttgatttgt cacttgtcct
    31141 tggtaaatgt ttacaccagt acttaaggct tcattatctt taattgcttg ttctaagcct
    31201 ttgtcacaaa tttctaatat ataatcaata tttccttgtg ctaatgccat tgttgaagtt
    31261 cttgggactg ctcctggttg atttggtaca ccataatgaa tcacaccttc ttcttcatac
    31321 actggatcag aaattgtagt tggtctaatt gtttcaatag ttccaccttg gtcaatagct
    31381 atatcgatta atactgaacc ttttttcatt gatttaacca tctcacgagt aaccaatttt
    31441 ggcggtttcg cacctggaat taaaattgta gaaataaata catctgcttt cttaatttgt
    31501 tctgctaaat tttctggtgt tgatttgact actgtgacat ctttttctgc atacatatct
    31561 tcaagatatt taatgcggtc atcgtttaac tcgataatga ttactttagc atttagtccc
    31621 aaggcaacat ttgctgcatt tgttgctgct actccaccac cgaaaatcac atatgtacta
    31681 ccaggtatat ccacattttc atgtacacca gtcactaaag taccttgacc accatgttgt
    31741 gcttcagagt agtaagctcc cataattgct gagcgttgac ctgctatagc actcattggc
    31801 gctaataatt ctgcttttcc attttttata atggtttcac cactaatcgc agttacacca
    31861 acttcttgca ttttttctac tatttctttt gaagatgcta gatgtaaaaa tccccagata
    31921 atttgattct ttttgaaata ttgatattcg ctttcatgag gttcttttac tttgataaca
    31981 agatcagctt cccatgcttg ttcgtgagtt acgatcttag cgccttcttt ttcatacata
    32041 tcgttagaaa atcctgaacc aatgccagca tttttttcaa caattacttt atgtcctgca
    32101 tccgttaact tacgcacatt ttcgggtgtg caagctacac gtccttcacc ttgttttaat
    32161 tctttgacta ctgcaactaa catttgcaac actcctcttt catttgtgaa taatttcaca
    32221 attattttat cctttggtta tgaatatgta aataccatta attaattatt catattttat
    32281 ctataatttg ttaataaata tttaatatat tattcttatt cttaaatatt atgtgcaatt
    32341 ataccactat atttatttct tatactccat ttgatttata gttgtattaa tacattgact
    32401 caaaaactaa ttaatcaaat atgtttttta gattaataaa gttgtaactg tactattttg
    32461 tagtgtatgg taatttattt ggatgaaata taattcttta tactctattg attaatcaaa
    32521 tatgtatcta tcaaaattcg gcttatttat tcactctgac atatccaaat acgcaaaaag
    32581 actatttcta ccttgtatcg atagaaatag tctttttata cttaattggt ttaatttttc
    32641 ataaaatctt atacttttta aaaatgggat gaaatatatt ttcctgaaac atgtaattca
    32701 tgttcgttac aaattgataa aatatgatta agcgttgttg caaatgacat tttctcaaaa
    32761 agcgcttcac tatcaattgg tacttgtgtg tgaatttcag ccagtcgctt cgataaatat
    32821 agttcatcta aattgtcatt aatcttatta cgttgcccag ctgataatgc atcaatgttt
    32881 tcaaccacat tttcaacgct ttgatattgc tgaattaact taatagccgt tttctcgcca
    32941 atacctttaa cacccgcata tccatctgct gtatcaccca taaacgcttt aatatcgatt
    33001 agttgttgtg gttcaagggc atattcttcg ttaaaacgat gtaatgtata tctattataa
    33061 atgttaaaac cttttttaat tagccaaact tcaacattgt cattaataca ttgcagtaaa
    33121 tctttgtcgc ccgtaataat atagacatcg ttatcagttg aatattgttg tgctaatgta
    33181 cctataacat catccgcttc atagttttta acgccaatat ttacaaagcc aaattgctct
    33241 gaaatttctt taacataatc aaattgtggt atcaattctt ctggtggtgc agaacgattt
    33301 tgcttataac catcaaacat atcatttcta aaagttgatt gtcccatatc ccaacataca
    33361 gctacatgtg tagggcgtat ttcatgtatt gccgaaaaga tatgacgcac aaatccttgt
    33421 attccatttg taggttcacc ttgtgaattg tacataaatt gtttatgaag acttgtagca
    33481 tagaaatgtc taaataatag cgccatacca tctacaagta atattttatt aggcatttaa
    33541 aacgttcctt ctttcttaat ataaaatagt tttcagttgt tgatgtttat ctttcaattg
    33601 attgataagt gttgtatcta aatcaaatgc taataaatcg tttatttgcg tttgaatatt
    33661 agcttcaaaa ctttcaaatt gcgattcagc ttctacagcc atttgcttta catataattc
    33721 aagctgttgc ctcaataatc ccatttgtgg ttgtaataat cctaacgtac tttgacaaat
    33781 tgattcatgt atatctcttt gcccatttgg attcaaaatt ttacgttttg ttaattgttt
    33841 aggcaatgca tttagcatat cgttgaaatc gatgtgcaat aatggttgct ctatattagc
    33901 tgattcaaag ttaaactgag gattaataat gacatgtaaa tctgctaatt gttgaacgat
    33961 tggtgcaatt tgctcagtga gttgcttatt aaagtatttt tttatacgtt ctgtaattaa
    34021 agattgctct aaaaacaatc gttgatgaat ttgatctaag tatactctcg tagacacttt
    34081 cttttcttca ttaaaatcac tattttgcgt catttgagaa ttaaacactg atttaacatc
    34141 gtcaagtagt tgtagtttta aacgggcatt taaatgataa acttgttctt caacttcgtt
    34201 gtctgtatgt tgtaacgtcg catcaattaa ttgatgttgt aaacgctgtt tatctttata
    34261 atctgttaac ctttgttggc gacgtgaaat atcagcttta tttgtttcaa attctgtaat
    34321 catctctaca taagaacgat ccatttgttg aagctgatga atcatttgtt gttctaaaat
    34381 tgatttagat tcaacatcaa caaattgttg tatgctttgt tttaattgat caatgccctt
    34441 atcttcagct tgcaatgcat ttcgacttga tacagcaaaa atgtctgatt gtaagtgtac
    34501 ttgtcttaat gcatctgata catatgtttc aactgcttca agatcatctt gactttctgc
    34561 taaatcagca gcattaatta ccattttaaa tgcttggttt tcattcaact ggttcatatc
    34621 tttcatgtgt tctataaacg ctttgtcatt atcagtaaat gaatgattaa aataacttac
    34681 atacaatatt aagtctgaag aagttaaaat ttgttcggtt tcatttgtat gcctttggtt
    34741 atttgagtgt agccctaatg aatcaacaat tattttacct tttaaccaat catgcattaa
    34801 tgcaatgtgt actgtcttaa caaatgttgc atattcatct tctgcactcc actttttcaa
    34861 ttcctgttga ttaatggcat gtttttctcc attttccaac atattgacat acaatttata
    34921 atgtttttca actgcctgaa taaaagcgag ttgattttta tttaaatgtg attttaactt
    34981 ttctaaatct gaattaataa agtcttctat agtcgaataa gacatatctt ggtattcaac
    35041 tactgcatta atttcatcta ataattgcga ttgtgatttt agcgttatat aactctcgtc
    35101 tccataagat atttctgtag tagctgctgt agtaggattt ggagaactga ctaaaatatg
    35161 ctcgcctaat aatgcattta tcaaactact tttaccagca ctaaatgttc caaatacacc
    35221 tatttttatt aatttattat ctatacgtgt taatgtttcg tggatatctt gctttgtacg
    35281 cttgaacaaa ggcacatccg aaattatatc aagcgctttt tgaatatcta tagacatatt
    35341 tgttgtagct gtattttgat ttagctgctg attatcacga ttatcctgag cattatcagt
    35401 agccacttga tatgttgtct cttgtcgacc tattaattta tctagagatt catctaaatg
    35461 aatatagtag tgacgataat tcttagtcgt caatgactga cgcagctcat ttaattctgt
    35521 ataacgttga tattctttta aatcatcact ttcttctgtt ggtaattcat ctgcctgcac
    35581 attttctatt atttctttaa aaattggtgt tgattgttgt tcaacatatt tcttaatggc
    35641 tttaaccact tcgtctgaaa atgtaagtac ataagtattg ctgattgatg tttgtggttg
    35701 atataaacct tcaatcattt ctggcttaac gtcataatgc tgatttaata ctttatctga
    35761 agcttctttt ttattgataa aacgcgtaac aaatgacata tcttctcgca ttggttgacg
    35821 aatttgttga ttaacatgtt cttgtaacgc atctgtcgct gttaataatc gctgttgttg
    35881 aatttgtagt tttttcttct ttttattaaa aaatccgcca acattaaagt cttgagacat
    35941 actttccaaa taacttcgta acatttctct catattatgc ggcataatgt atgcattttc
    36001 taaaatattt ttacgcttat tctttaaaaa tgccattaat tcatctggat tatttaaaag
    36061 ttgtgcctct tcactaattg cttgatgttg ttgactattt aaaaatgctt gttcaaactc
    36121 cgcttcttcg atacctaaat cttctagtac ttcctgaatt tcagactgaa tgtaatctag
    36181 ctgagcttcg gtaatgtatt caaccgttct tgatgtataa tcctctattg tctctctatg
    36241 ttgatctaat gaaattagat aacttgataa tacttcaagt tcattttcag ggtgatcaaa
    36301 tttagataca taaaaggtgc gttctaattt aataccccaa tctgcaattg atttttcaac
    36361 tcgagattta aacgtagaga atgacaattc atcgtcttga tgcttgtcaa tttgattaat
    36421 gataaacaca acaggtattc caacatcatt tatatgcttc ataaacttaa agttaagttc
    36481 agattgaacg tggttatagt caaccgtata aaatatcata ttacttgtat acatatattg
    36541 ttctgttatt gactgatgtg atgcaacatt tgaatcaaca cctggtgtat cttgcaacgt
    36601 aaacccattt tcaaatttag ctgattgaaa attaatttct acagattcaa cgtcgacatt
    36661 ttggcgattc atttccctta cttcatcata attagataat ttggcatacg tttgattcgg
    36721 caaattagca ataatatcgt gattgtctga aactgacaca atagcagtat tacttgtcgt
    36781 tggtacaggt gaacttggta agatatcttg ttcaattaat aaatttatca gtgtcgattt
    36841 acctgcagaa aaatgtccaa cgaacgaaca tgtatattgc tgcaaatata ctttcttaat
    36901 tacttggtta attgtatgta aaagtgcttc atttcgcgac ttttcaactt ctttttttaa
    36961 tttatataaa agatctaatt gttctttatt aatcatgtta ctttcccctt tggttcgttc
    37021 acatagaaat gcttgcttgt tacaacgaat tcatacaata tcgatgtcca tttaaacata
    37081 gatcgttaaa tggctcgcat tgtattatgt ttaaatttta tcatagctgc ttgataaaac
    37141 atacgaataa tcaattttct tcaaacattc caacttaaaa gttcattttt ctaaaaatca
    37201 caaatcatcg ttaaattttt ctagaaaata aatattgtca cagtttgttc acacacatca
    37261 cagaattgac accgtataat agccaattgg gagggaaata tgaaaaatac atttaatcca
    37321 ttacaaagat tacatttcta tgcagcaata tttattgctc cactgttaat cactttaacc
    37381 atttcgggca ttggttactt gttctttcca gaagttgaaa ataatattta taagaatgag
    37441 ttttttggtg acagtgatgt aaaaacgcat caaacattaa atgatgcagt acatcaagtt
    37501 gaacaacaat atgaaggatt ctttgtaagt aaagttagca tacttgatga accatataac
    37561 aaacgaatta cactgagtga tatggcagga aatcaacgtt acgtctttct agatcataac
    37621 aatcaatttg ttgcagatca aaatgcgaaa catacgtatt ctaatgtgat gcgaagtata
    37681 catagttctt tgtttactga aaatactatt attaattatt tagtagagtt aaccgcatgt
    37741 tggatgatat tcatgatttt atctggtact tatttactca ttaagaagca tttaatttct
    37801 aacaaaagta aggcacttcg ttggcaaaag tggcacgcaa tgattggagt tatcattgca
    37861 attccagtat ttgtattagt cttaactgga ttgccatggt ctggttttat gggcagtaaa
    37921 attgccggta tgatggacac aaacggtgac cttggtcaag gtgaattagc gattaatcca
    37981 cctaaatcag atttgaacga attaccttgg gctacacgta aaaataaaca gccagcttca
    38041 tccgaaaaag gttcaagtgg tcatcatggt aatgcagcaa tgcctcaaac caaattagat
    38101 tatcaaatat ctattgataa ggtcgttgaa caggcgcaaa aagctggtat taaaaagccg
    38161 ttttcaatcg tatatccaag tgataaaaat ggtaccttta ttgtatctaa tactagtaat
    38221 tcaggtgtta ctgggctaga tgtatcacca tacaaggaac aaacacttta tttcgatcaa
    38281 tatagcggta aaaagctagg tacgattaaa tatgatgact acggtattat tgctaaatgg
    38341 tttacatggg gcattccgct tcacgaaggt catttattcg gcattttaaa taaaatcatt
    38401 aatttatttg tatgtatcgc tttattagta gccattggca tggggtttgt ctcttggata
    38461 aagcgtacaa aaaatactgc agtaaaagta ccacatcgcg taaaaaaacc agcatctata
    38521 tcactcataa tatgtttaat tgtattagga ttattaatgc cattatttgg attatcactt
    38581 atccttgtat ttataattga attaatatta tatattaaag atcgtcgtgc taaacaataa
    38641 tgcacttaaa gttttgaact gacgaaattt acaaaatgat tctcgtctct ctaattactt
    38701 aaaacgggtt ctataataaa tcgtactgat ggaaagtttt tactttttat ctgtccgatt
    38761 ttttgaattt gaagataaaa aagcatctaa aacgcataag aagataactc tacttcttca
    38821 aaattacgtt atagatgctt ttttattaat tcatatgcat gtcgtgaatt ttcatcatta
    38881 aaccgtgtgg gacgtcatca tgtttaacaa tctcttgttt ataaaatgtc ttcccatcat
    38941 ctttagaaac taattttaca aagtctcctt ttttcggctt gaaatcatta gatggttcta
    39001 ctttgatatt atgtttgact aatccatctt tttcactgac aactttttct gcatttgtat
    39061 tactattcat ataaccaaaa taagtcgttt tttgactaga aaaaatcatt aaacatacaa
    39121 cggcaatacc aataacaacc aatgcaatag ataaacctag acccattttt ttacccattt
    39181 atagactcct ccgtttttca aaaataccta ttatcatgag aacttaatta ttactaattt
    39241 tagtcacgca ttagaaacac tttagttttc aatagtttta cgttctgtct ttttacccca
    39301 gtattgataa taagtacatt ctatatatcc attaaataac ttacgtcgct ttgttgcttt
    39361 acgatctact aaatattcaa attctttatt acttgttaaa atgtatgtag ataaaaatgg
    39421 atgttgtttc attagtttac caatataacg gtacatttct tcaacttctt cacgatcacc
    39481 aatacgttca ccatatggag gatttccaat taacgccacc ggttcttctg tatcaattgt
    39541 taatgtattg acatctttta cactaaattt aataatatca gacaccccaa cttcttcagc
    39601 gttacgctta gcaatctcta ccatttctgg atcgatatca gaagcatata cttcgatttc
    39661 tttatcataa tcagccatct tatccgcttc atcacggtaa tcatcataaa tatttgctgg
    39721 catgatgttc cattgctctg atacgaactc gcgattaaaa ccaggtgcga tattttgagc
    39781 aattaaacaa gcttctatag ctattgtacc cgaaccgcaa aatggatcaa ttaaaggtgt
    39841 atcacctttc cagtttgcaa gacggattaa acttgctgcc aacgtttctt taattggtgc
    39901 ttcaccttgt gctaatctat aaccacgtct gttcaaacca gaacctgatg tgtcgatagt
    39961 caataataca ttatctttta aaatggcaac ttcaacaggg tatttggcac ctgattcatt
    40021 taaccaacct ttttcgttat atgcgcgacg taatcgttca acaatagctt tcttagttat
    40081 cgcctgacaa tctggcacac tatgtagtgt tgatttaacg cttctacctt gaactgggaa
    40141 gttaccctct ttatcaatta tagattccca agggagcgct ttggtttgtt cgaataattc
    40201 gtcaaacgtt gttgcgttaa aacgtccaac aacaattttg attcggtctg ctgtgcgcaa
    40261 ccataaattt gcctttacaa ttgcacttgc gtctccttca aaaaatatac gaccattttc
    40321 aacatttgtt tcatagccta attcttgaat ttccctagca acaacagctt ctaatcccat
    40381 cggacaaact gcaagtaatt gaaacatata tgattctcct tttatacagg tattttattc
    40441 ttagcttgtg ttttttatac atttccaaca aatttaatcg ctgatacatt aacgcatccg
    40501 cttactattt taaaacaagg cagtgtcatt atatcaagac aaggcgttaa ttttaagtgt
    40561 tcttttcatg aaaaaagctc tccatcatct aggagagcta aactagtagt gatatttcta
    40621 taagccatgt tctgttccat cgtactcatc acgtgcacta gtcacactgg tactcaggtg
    40681 ataaccatct gtctacacca cttcatttcg cgaagtgtgt ctcgtttata cgttgaattc
    40741 cgttaaacaa gtgctcctac caaatttgga ttgctcactc gaggggttta ccgcgttcca
    40801 ccttttatat ttctataaaa gctacgtcac tgtggcactt tcaaattact ctatccatat
    40861 cgaaagactt aggatatttc attgccgtca aattaatgcc ttgatttatt gtttcatcaa
    40921 gcacgaacac tacaatcatc tcagactgtg tgagcatgga ctttcctcta tataatatag
    40981 cgattaccca aaatatcact tttaaaatta taacatagtc attattagta agacagttaa
    41041 acttttgtat ttagtaatta tttaccaaat acagcttttt ctaagtttga aatacgtttt
    41101 aaaatatcta cattatttga agatgtattt gttgttgtat tattcgaaga aaaactttta
    41161 ttgtcctgag gtcttgatgt tgctacacgt agtcttaatt cttctaattc ttttttaagt
    41221 ttatgattct cttctgataa ttttacaact tcattattca tatcggccat tttttgataa
    41281 tcagcaataa tgtcatctaa aaatgcatct acttcttctc ttctatagcc acgagccatc
    41341 gttttttcaa aatctttttc ataaatatct tttgctgata atttcaatga aacatctgac
    41401 attttttcca cctcattaga aactttgatc ttcagaccac tgtaagtcat tgatgaatgc
    41461 tgttaattca tcgaacgtca caatatcaca agtatagttt gttttatcca taaaatcaac
    41521 taacatctgc ttgaagaact taggactcgc ctcttgttcc tcatcataaa tgagcaatgt
    41581 ttgatccgaa tgttcaagca taaattgatc tgcttgttta aattgaaaag gaccttgata
    41641 cgacgtatga aaaatactat caacataatc tgcatgctta attatgttgg catacttact
    41701 ttgattatgt tcattccact tttctgtatg tccttggaac ggtgtaatta cagcaaactt
    41761 taacgaatca tatgttcgtt gtaattcaat aacaacttct gcagtccata attctatacc
    41821 catttgccct tgtattaaca cccattctaa tccttcatcc aacagttgtt caattttatg
    41881 ttttataaat tgttttaaat aatgtacttc aggtgcgtca tctttaaaaa tgtttaattc
    41941 gaatgatttg taacctgtta cataaactgt tttaaccatc agtaccctct tttgttacgc
    42001 catctaatat attttgtaaa tcatattgaa cacttttaag cttttctata aataactttc
    42061 gacttgttcg cttaaaatga cattcgacag aaagttgttc aatgttagca atcagtagct
    42121 caaatttcct tgaattcata taaggtactt ctataataaa ttcacgatgt aatttgatct
    42181 cattgagtat gctatcaata tgttcagtat atggctttac agtttggtaa aaatcatgat
    42241 cttgttgttg tgatttcaca ttttcaaaat tttgttgcat gttgttaact tcataaatta
    42301 gtgattcgac tacatcattc atgaggacgc ctcctacatt ttttaattta tcacaatata
    42361 ctgtattcgt catgttttaa cactctatat aatttgattt aactattttt tcaaatgtgt
    42421 tatctgttaa atcaagtaaa tctaaaaact tcctatataa at
//
LOCUS       DALPQQ010000010        40021 bp    DNA     linear   BCT 22-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus strain K18-6-464
            SAMD00233528-rid16434743.denovo.010, whole genome shotgun sequence.
ACCESSION   DALPQQ010000010 DALPQQ010000000
VERSION     DALPQQ010000010.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMD00233528
            Sequence Read Archive: DRR236061
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 40021)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 40021)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001543423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001543423.1
            Genome Coverage       :: 77x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/22/2022 17:09:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,811
            CDSs (total)                      :: 2,743
            Genes (coding)                    :: 2,689
            CDSs (with protein)               :: 2,689
            Genes (RNA)                       :: 68
            rRNAs                             :: 2, 4, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 4, 2 (16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 54
            CDSs (without protein)            :: 54
            Pseudo Genes (ambiguous residues) :: 0 of 54
            Pseudo Genes (frameshifted)       :: 27 of 54
            Pseudo Genes (incomplete)         :: 27 of 54
            Pseudo Genes (internal stop)      :: 10 of 54
            Pseudo Genes (multiple problems)  :: 10 of 54
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..40021
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMD00233528-rid16434743.denovo.010"
                     /strain="K18-6-464"
                     /db_xref="taxon:1280"
                     /geo_loc_name="Japan: Niigata"
     gene            797..1195
                     /gene="nrdI"
                     /locus_tag="O7798_000423"
     CDS             797..1195
                     /gene="nrdI"
                     /locus_tag="O7798_000423"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499301.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class Ib ribonucleoside-diphosphate reductase
                     assembly flavoprotein NrdI"
                     /protein_id="HDC2862699.1"
                     /translation="MKIIYFSFTGNVRRFIKRTELENTLEITAENCMEPVHEPFIIVT
                     GTIGFGEVPEPVQSFLEVNHQYIRGVAASGNRNWGLNFAKAGRTISEEYNVPLLMKFE
                     LHGKNKDVIEFKNKVGNFNENHGREKVQSY"
     gene            1158..3263
                     /gene="nrdE"
                     /locus_tag="O7798_000424"
     CDS             1158..3263
                     /gene="nrdE"
                     /locus_tag="O7798_000424"
                     /EC_number="1.17.4.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000855513.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class 1b ribonucleoside-diphosphate reductase
                     subunit alpha"
                     /protein_id="HDC2862700.1"
                     /translation="MKTMEEKKYNHIELNNEVTKRREDGFFSLEKDQEALVAYLEEVK
                     DKTIFFDTEIERLRYLVDNDFYFNVFDIYSEADLIEITDYAKSIPFNFASYMSASKFF
                     KDYALKTNDKSQYLEDYNQHVAIVALYLANGNKAQAKQFISAMVEQRYQPATPTFLNA
                     GRARRGELVSCFLLEVDDSLNSINFIDSTAKQLSKIGGGVAINLSKLRARGEAIKGIK
                     GVAKGVLPIAKSLEGGFSYADQLGQRPGAGAVYLNIFHYDVEEFLDTKKVNADEDLRL
                     STISTGLIVPSKFFDLAKEGKDFYMFAPHTVKEEYGVTLDDIDLEKYYDDMVANPNVE
                     KKKKNAREMLNLIAQTQLQSGYPYLMFKDNANRVHPNSNIGQIKMSNLCTEIFQLQET
                     SIINDYGIEDEIKRDISCNLGSLNIVNVMESGKFRDSVHSGMDALTVVSDVANIQNAP
                     GVRKANSELHSVGLGVMNLHGYLAKNKIGYESEEAKDFANIFFMMMNFYSIERSMEIA
                     KERGIKYQDFEKSDYANGKYFEFYTTQEFEPQFEKVRELFDGMAIPTSEDWKKLQQDV
                     EQYGLYHAYRLAIAPTQSISYVQNATSSVMPIVDQIERRTYGNAETFYPMPFLSPQTM
                     WYYKSAFNTDQMKLIDLIATIQTHIDQGISTILYVNSEISTRELARLYVYAHYKGLKS
                     LYYTRNKLLSVEECTSCSI"
     gene            3381..4352
                     /gene="nrdF"
                     /locus_tag="O7798_000425"
     CDS             3381..4352
                     /gene="nrdF"
                     /locus_tag="O7798_000425"
                     /EC_number="1.17.4.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499303.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class 1b ribonucleoside-diphosphate reductase
                     subunit beta"
                     /protein_id="HDC2862701.1"
                     /translation="MIAVNWNTQEDMTNMFWRQNISQMWVETEFKVSKDIASWKTLSE
                     AEQDTFKKALAGLTGLDTHQADDGMPLVMLHTTDLRKKAVYSFMAMMEQIHAKSYSHI
                     FTTLLPSSETNYLLDEWVLEEPHLKYKSDKIVANYHKLWGKEASIYDQYMARVTSVFL
                     ETFLFFSGFYYPLYLAGQGKMTTSGEIIRKILLDESIHGVFTGLDAQHLRNELSESEK
                     QKADQEMYKLLNDLYLNEESYTKMLYDDLGITEDVLNYVKYNGNKALSNLGFEPYFEE
                     REFNPIIENALDTTTKNHDFFSVKGDGYVLALNVEALQDDDFVFDNK"
     gene            4754..4909
                     /locus_tag="O7798_000426"
     CDS             4754..4909
                     /locus_tag="O7798_000426"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499305.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDC2862702.1"
                     /translation="MFYFTLSKQNTHSEKLNFSLIANINKIDTKLFERLLKLWSKNAT
                     INEKYYQ"
     gene            4948..5919
                     /locus_tag="O7798_000427"
     CDS             4948..5919
                     /locus_tag="O7798_000427"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499306.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HDC2862703.1"
                     /translation="MKYLLKGNILLLLLILLTIISLFIGVSELSIKGLLHLTESQRNI
                     LFSSRIPRTMSILIAGSSLALAGLIMQQMMQNKFVSPTTAGTMEWAKLGILIALLFFP
                     TGHILLKLVFAVICSICGTFLFVKIIDFIKVKDVIFVPLLGIMMGGIVASFTTFISLR
                     TNAVQSIGNWLNGNFAIITSGRYEILYLSIPLLALTYLFANHFTIVGMGKDFTNNLGL
                     SYEKLINIALFITATITALVVVTVGTLPFLGLVIPNIISIYRGDHLKNAIPHTMMLGA
                     IFVLFSDIVGRIVVYPYEINIGLTIGVFGTIIFLILLMKGRKNYAQQ"
     gene            5906..6862
                     /locus_tag="O7798_000428"
     CDS             5906..6862
                     /locus_tag="O7798_000428"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499307.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron chelate uptake ABC transporter family
                     permease subunit"
                     /protein_id="HDC2862704.1"
                     /translation="MRNNNKKIMLLIAVTLLISMLYLFVGIDFEIFEYQFSSRLRKFI
                     LIILVGAAIATSVVIFQAITNNRLLTPSIMGLDAVYLFIKVLPVFLFGIQSVWVTNVY
                     LNFILTLITMVLFALILFQGIFKIGHFSIYFILLIGVLLGTFFRSITGFIQLIMDPES
                     FLAIQSSMFANFNASNSNLVTFSAVLLVILLVITILLLPYLDVLLLGRVEAINLGISY
                     EKLTRILLVIVSVLVSVSTALVGPITFLGLLTVNLAHELMKTYEHKYILIATICLSWI
                     SLFSAQWVVENVFEATTEMSILIDLIGGSYFIYLLVRRRNAQ"
     gene            6859..7620
                     /locus_tag="O7798_000429"
     CDS             6859..7620
                     /locus_tag="O7798_000429"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499308.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HDC2862705.1"
                     /translation="MIQVENLTKTINNQMILEDISIDIEKGKLTSLIGPNGAGKSTLL
                     SAICRLIRFENGEVKIDGQLMSDYKNNDLSKKISILKQTNHTEMNITVEQLVNFGRFP
                     YSKGRLTKEDHDIVNDALDLLQLQDIRNRNIKSLSGGQRQRAYIAMTIAQDTEYILLD
                     EPLNNLDMKHAVQIMQTLKMLAHKMNKAIVIVLHDINFASCYSDQIVALKNGQLVKSD
                     LKDNVIQSSVLSDLYDMNIQIEHIRNQRICLYFKD"
     gene            7739..8767
                     /locus_tag="O7798_000430"
     CDS             7739..8767
                     /locus_tag="O7798_000430"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499309.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="siderophore ABC transporter substrate-binding
                     protein"
                     /protein_id="HDC2862706.1"
                     /translation="MKKTVLYLVLAVMFLLAACGNNSDKEQSKSETKGSKDTVKIENN
                     YKMRGEKKDGSDAKKVKETVEVPKNPKNAVVLDYGALDVMKEMGLSDKVKALPKGEGG
                     KSLPNFLESFKDDKYTNVGNLKEVNFDKIAATKPEVIFISGRTANQKNLDEFKKAAPK
                     AKIVYVGADEKNLIGSMKQNTENIGKIYDKEDKAKELNKDLDNKIASMKDKTKNFNKT
                     VMYLLVNEGELSTFGPKGRFGGLVYDTLGFNAVDKKVSNSNHGQNVSNEYVNKENPDV
                     ILAMDRGQAISGKSTAKQALNNPVLKNVKAIKEDKVYNLDPKLWYFAAGSTTTTIKQI
                     EELDKVVK"
     gene            complement(9084..9398)
                     /locus_tag="O7798_000431"
     CDS             complement(9084..9398)
                     /locus_tag="O7798_000431"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499310.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDC2862707.1"
                     /translation="MPKVYGSLIDTETRCRHYFTEEDIIAIKFKCCNKYYPCYKCHNE
                     FEKHAIKRWSEPSFNEKAILCGVCKHELTINEYMMVERCPNCQSRFNNRCKYHYHIYF
                     EI"
     gene            complement(9416..10339)
                     /locus_tag="O7798_000432"
     CDS             complement(9416..10339)
                     /locus_tag="O7798_000432"
                     /EC_number="1.3.1.98"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499311.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylmuramate dehydrogenase"
                     /protein_id="HDC2862708.1"
                     /translation="MINKDIYQALQQLIPNEKIKVDEPLKRYTYTKTGGNADFYITPT
                     KNEEVQAVVKYAYQNEIPVTYLGNGSNIIIREGGIRGIVISLLSLDHIEVSDDAIIAG
                     SGAAIIDVSRVARDYALTGLEFACGIPGSIGGAVYMNAGAYGGEVKDCIDYALCVNEQ
                     GSLIKLTTKELELDYRNSIIQKEHLVVLEAAFTLAPGKMTEIQAKMDDLTERRESKQP
                     LEYPSCGSVFQRPPGHFAGKLIQDSNLQGHRIGGVEVSTKHAGFMVNVDNGTATDYEN
                     LIHYVQKTVKEKFGIELNREVRIIGEHPKES"
     gene            complement(10466..10984)
                     /locus_tag="O7798_000433"
     CDS             complement(10466..10984)
                     /locus_tag="O7798_000433"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499312.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GrpB family protein"
                     /protein_id="HDC2862709.1"
                     /translation="MYSNVQPFINSDLTNCFQSQYTEIESLLFNLLDSPVKYTKHIGG
                     THHFKYSTEPILDILVGVENLHDITSLDEKRLNYVGFYRLHHKYTKKVMMAKFNNFHE
                     LKQQVRLHIIQMNTQTFESYLALDYLLSTNDDIALQFNTKKHQILQHSLTIRQYEMQK
                     QQYFEKLCKKYL"
     gene            11104..11982
                     /locus_tag="O7798_000434"
     CDS             11104..11982
                     /locus_tag="O7798_000434"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499313.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EMYY motif lipoprotein"
                     /protein_id="HDC2862710.1"
                     /translation="MKKIVIIAVLAILFVVISACGNKEKEAQHQFTKQFKDVEQKQKE
                     LQHVMDNIHLKEIDHLSKTDTTDKNSKEFKALQEDVKNHLIPKFEAYYKSAKNLPDDT
                     MKVKKLKKEYMTLANEKKDAIYQLKKFIGLCNQSIKYNEDILDYTKQFEKNRYKVESE
                     IKLADNKSEATNLTTKLEHNNKALRDTAKKNLDDSKENEVKGAIKNHIMPMIEKQITD
                     INQTNISDKHVNNARKNAIEMYYSLQNYYNTRIETIKVSEKLSKVDVDKLPKKGIDIT
                     HGDKAFEKKLEKLEEK"
     gene            12136..12456
                     /gene="ytxJ"
                     /locus_tag="O7798_000435"
     CDS             12136..12456
                     /gene="ytxJ"
                     /locus_tag="O7798_000435"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499314.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bacillithiol system redox-active protein YtxJ"
                     /protein_id="HDC2862711.1"
                     /translation="MAIKLSSIDQFEQVIEENKYVFVLKHSETCPISANAYDQFNKFL
                     YERDMDGYYLIVQQERDLSDYIAKKTNVKHESPQAFYFVNGEMVWNRDHGDINVSSLA
                     QAEE"
     gene            12881..14005
                     /locus_tag="O7798_000436"
     CDS             12881..14005
                     /locus_tag="O7798_000436"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499315.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycerate kinase"
                     /protein_id="HDC2862712.1"
                     /translation="MKVLVAMDEFHGIISSYQANRYVEEAVASQIETADVVQVPLFNG
                     RHELLDSVFLWQSGQKYRIPVHDADMNEVEGVYGQTDTGMTVIEGNLFLKGKKPIVKR
                     TSYGLGEMIKHALDNDAKHVVISLGGIDSFDAGAGMLQALGAQFYDDEGRVVDMRQGA
                     GVIKYIRRMDMSNLHPKMETARIQVMSDFSSRLYGKQSEIMQTYDAHQLNHNQAAEID
                     NLIWYFSELFKSELKIAIGPVERGGAGGGIAAVLNGLYQAEILTSHALVDQLTHLENL
                     VEQADLIIFGEGLNENDQLLETTTLRIAELCHKHQKVAIAICATAEKFDLFESQGVTA
                     MFNTFIDMPETYTDFKMGLQIRHYTVQSLKLLKTHFNVEV"
     gene            complement(14194..15420)
                     /gene="pepT"
                     /locus_tag="O7798_000437"
     CDS             complement(14194..15420)
                     /gene="pepT"
                     /locus_tag="O7798_000437"
                     /EC_number="3.4.11.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499316.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidase T"
                     /protein_id="HDC2862713.1"
                     /translation="MKNQLIDRLTRYTTIDTQSDPKSTTTPSTEKQWDLLHLLEKELQ
                     QLGLPTDLDENGYLFATLESNIDVDVPTVGFLAHVDTSPDFNASNVKPQIIENYDGKP
                     YKLGNTKRVLDPKVFPELNSLVGHTLMVTDGTSLLGADDKAGIVEIMEAICYLQEHPE
                     IKHGTIRIGFTPDEEIGRGPHKFDVDRFNADFAYTMDGSQYGELQYESFNAAEAVITC
                     HGINVHPGSAKNAMVNAIRLGEQFDSLLPDSEVPERTEGYEGFYHLMNFEGTVEKATL
                     QYIIRDHDKKQFELRKKRILEIRDDINAHFENYPVKVDISDQYFNMAEKILPLPHIID
                     IPKRVFAKLDIPANTEPIRGGTDGSQLSFMGLPTPNIFTGCGNFHGPYEYASIDVMEK
                     AVQVIIGIVEDIAENH"
     gene            complement(15434..15928)
                     /locus_tag="O7798_000438"
     CDS             complement(15434..15928)
                     /locus_tag="O7798_000438"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499317.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="threonine/serine exporter family protein"
                     /protein_id="HDC2862714.1"
                     /translation="MLFYLFHFTISFISTVLFSIIFNAPKRLLVACGFVGAIAWTIYQ
                     LTVDLEFGKVGASFLGSLILGLMSHTMSRRYKRPVIIFIVPGIIPLVPGGAAYQATRF
                     LVSNDYTSAVNTFLEVTLISGAIAFGILVSEILYYLYTRIKQLYGKIKGKTYKKSYNM
                     NNRV"
     gene            complement(15946..16707)
                     /locus_tag="O7798_000439"
     CDS             complement(15946..16707)
                     /locus_tag="O7798_000439"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499318.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="threonine/serine exporter ThrE family protein"
                     /protein_id="HDC2862715.1"
                     /translation="MPDSITIIDENKVIDVVLIAGRILLESGAETYRVEDTMNRIAHS
                     YGLHNTYSFVSSTAIIFSLNDRTSTRLIRVQERTTDLEKIALTNSLSRKISNKELTID
                     EAKSEFIHLQHASLQYSFLTNFFAAAIACGFFLFMFGGVASDCWIAVIAGGSAFLTFS
                     FVQRYIQIKFFSEFVAAAVVISIAATFTKLGIATNQDIITIASVMPLVPGILITNAIR
                     DLLAGELLAGMSRGVEAALTAFAIGAGVAIVLLII"
     gene            complement(16903..17973)
                     /locus_tag="O7798_000440"
     CDS             complement(16903..17973)
                     /locus_tag="O7798_000440"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499319.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="diguanylate cyclase"
                     /protein_id="HDC2862716.1"
                     /translation="MFEAFIYNISVIVAGIYLFHRLQYSENKRMVFSKAYVTVLMTIV
                     SLLLSVYPIPYREDYLIHLTFVPLLFLGRFTNMVYTLSATVIVAIVEIVVFNNSIMYG
                     VTLIVIAAVTSAIGPFLKQNDVLSLLILNVVTIIILFGVALVSPIYTLSEVIILIPIS
                     LIITLASAITFVDIWHFFSLVNRYENEDKYDYLTGLGNVKEFDRHLNEISRKAEKEHQ
                     SIALLLIDIDGFKDVNDTYSHKSGDAVLKQMSQLLKNYVPNQFKIFRNGGEEFSVVIH
                     NYSLDQSVKLAENIRSGVEKSSFHLPNKEVIKLSVSIGVGYLTDDDPKSQRKVFKDAD
                     DMVHVAKNQGRNKVMFNPIINL"
     gene            18291..19346
                     /locus_tag="O7798_000441"
     CDS             18291..19346
                     /locus_tag="O7798_000441"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499320.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="undecaprenyl/decaprenyl-phosphate
                     alpha-N-acetylglucosaminyl 1-phosphate transferase"
                     /protein_id="HDC2862717.1"
                     /translation="MVTLLLVAVTMIVSLTITPIVIAISKRLNLVDKPNFRKVHTKPI
                     SVMGGTVILFSFLIGIWIGHPIETEIKPLIIGAIIMYVLGLVDDIYDLKPYIKLAGQI
                     AAALVVAFYGVTIDFISLPMGTTIHFGFLSIPITVIWIVAITNAINLIDGLDGLASGV
                     SAIGLITIGFIAILQANIFITMICCVLLGSLIGFLFYNFHPAKIFLGDSGALMIGFII
                     GFLSLLGFKNITIIALFFPIVILAVPFIDTLFAMIRRVKKGQHIMQADKSHLHHKLLA
                     LGYTHRQTVLLIYSISILFSLSSIILYVSPPLGVVLMFVLIIFSIELIVEFTGLIDNN
                     YRPILNLISRKSSHKEE"
     gene            complement(19516..20157)
                     /locus_tag="O7798_000442"
     CDS             complement(19516..20157)
                     /locus_tag="O7798_000442"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499321.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YigZ family protein"
                     /protein_id="HDC2862718.1"
                     /translation="MTQNIITVKKEHIIENVISKSRFIAHIKPVQNEDEAKAFIAAIK
                     KEHKDATHNCSAYTIGPEMNIQKANDDGEPTGTAGVPMLDILKKLDVHNACVVVTRYF
                     GGIKLGGGGLIRAYSGAVRDVIYDIGRVELREAVPCIVTLNYDQTGKFEYELASTHFM
                     LRNQTYTDKVSYYIDVVKSDYEAFINFLNQMTAGNFDLTEETPKQLPFDIPTE"
     gene            20301..21167
                     /gene="fakB1"
                     /locus_tag="O7798_000443"
     CDS             20301..21167
                     /gene="fakB1"
                     /locus_tag="O7798_000443"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000686350.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fatty acid kinase binding subunit FakB1"
                     /protein_id="HDC2862719.1"
                     /translation="MKIAVMTDSTSYLSQDLIDKYNIQIAPLSVTFDDGKNFTESNEI
                     AIEEFYNKMASSQTIPTTSQPAIGEWITKYEMLRDQGYTDIIVICLSSGISGSYQSSY
                     QAGEMVEGVNVHAFDSKLAAMIEGCYVLRAIEMVEEGYEPQQIIDDLTNMREHTGAYL
                     IVDDLKNLQKSGRITGAQAWVGTLLKMKPVLKFEDGKIIPEEKVRTKKRAIQTLEKKV
                     LDIVKDFEEVTLFVINGDHFEDGQALYKKLQDDCPSAYQVAYSEFGPVVAAHLGSGGL
                     GLGYVGRKIRLT"
     gene            21531..22613
                     /locus_tag="O7798_000444"
     CDS             21531..22613
                     /locus_tag="O7798_000444"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011382223.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DEAD/DEAH box helicase"
                     /protein_id="HDC2862720.1"
                     /translation="MDNVTRYKITESSQSSSQAYYHLSFELSEQQSYASEHIVRAIRK
                     RQTILLYAVTGAGKTEMMFQGIQYARIQGDNIAIVSPRVDVVVEISKRIKDAFLNEDI
                     DILHQQSRQQFEGHFVVCTVHQLYRFKQHFDTIFIDEVDAFPLSMDKNLQQALKSSSK
                     VEHATIYMTATPPKQLLSEIPHENIIKLPARFHKKSLPVPKYRYFKLNNKKIQKMLYR
                     ILQDQINNQRYTLVFFNNIETMIKTFSVYKQKITKLTYVHSEDVFRFEKVEQLRNGHF
                     DVIFTTTILERGFTMANLDVVVIDAHQYTQEALIQIAGRVGRKLECPTGKVLFFHEGV
                     SMNMIQAKKEIQRMNKLALKRGWIDE"
     gene            22606..23280
                     /locus_tag="O7798_000445"
     CDS             22606..23280
                     /locus_tag="O7798_000445"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499324.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ComF family protein"
                     /protein_id="HDC2862721.1"
                     /translation="MNNCLSCGAKLYENITIYNLFKKPNRLCDRCKENWDNIKLDIKA
                     RRCSRCLKHLNQDEAYCLDCKFLSAHFNLMEQLYCQFQYDGLMKEMIHQYKFLKDYYL
                     CELLAHLIEIPQTSYDYIVPIPSSPAHDLSRTFNPVEAVLKAKGIRFDKILKMSNRPK
                     QSHLTKKERLADENPFIIDTELDLNGKEILLVDDIYTTGLTIHRAGCKLYAKNIRKFK
                     VFAFAR"
     gene            23341..23913
                     /gene="raiA"
                     /locus_tag="O7798_000446"
     CDS             23341..23913
                     /gene="raiA"
                     /locus_tag="O7798_000446"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499325.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome-associated translation inhibitor RaiA"
                     /protein_id="HDC2862722.1"
                     /translation="MIRFEIHGDNLTITDAIRNYIEEKIGKLERYFNDVPNAVAHVKV
                     KTYSNSATKIEVTIPLKNVTLRAEERNDDLYAGIDLINNKLERQVRKYKTRINRKSRD
                     RGDQEVFVAELQEMQETQVDNDAYDDNEIEIIRSKEFSLKPMDSEEAVLQMNLLGHDF
                     FVFTDRETDGTSIVYRRKDGKYGLIQTSEQ"
     gene            24327..26858
                     /gene="secA"
                     /locus_tag="O7798_000447"
     CDS             24327..26858
                     /gene="secA"
                     /locus_tag="O7798_000447"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499326.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="preprotein translocase subunit SecA"
                     /protein_id="HDC2862723.1"
                     /translation="MGFLSKILDGNNKEIKQLGKLADKVIALEEKTAILTDEEIRNKT
                     KQFQTELADIDNVKKQNDYLDKILPEAYALVREGSKRVFNMTPYKVQIMGGIAIHKGD
                     IAEMRTGEGKTLTATMPTYLNALAGRGVHVITVNEYLSSVQSEEMAELYNFLGLTVGL
                     NLNSKTTEEKREAYAQDITYSTNNELGFDYLRDNMVNYSEDRVMRPLHFAIIDEVDSI
                     LIDEARTPLIISGEAEKSTSLYTQANVFAKMLKQDEDYKYDEKTKAVHLTEQGADKAE
                     RMFKVENLYDVQNVDVISHINTALRAHVTLQRDVDYMVVDGEVLIVDQFTGRTMPGRR
                     FSEGLHQAIEAKEGVQIQNESKTMASITFQNYFRMYNKLAGMTGTAKTEEEEFRNIYN
                     MTVTQIPTNKPVQRNDKSDLIYISQKGKFDAVVEDVVEKHKAGQPVLLGTVAVETSEY
                     ISNLLKKRGIRHDVLNAKNHEREAEIVAGAGQKGAVTIATNMAGRGTDIKLGEGVEEL
                     GGLAVIGTERHESRRIDDQLRGRSGRQGDKGDSRFYLSLQDELMIRFGSERLQKMMSR
                     LGLDDSTPIESKMVSRAVESAQKRVEGNNFDARKRILEYDEVLRKQREIIYNERNSII
                     DEEDSSQVVDAMLRSTLQRSINYYINTADDEPEYQPFIDYINDIFLQEGDITEDDIKG
                     KDAEDIFEVVWAKIEAAYQSQKDILEEQMNEFERMILLRSIDSHWTDHIDTMDQLRQG
                     IHLRSYAQQNPLRDYQNEGHELFDIMMQNIEEDTCKFILKSVVQVEDNIEREKTTEFG
                     EAKHVSAEDGKEKVKPKPIVKGDQVGRNDDCPCGSGKKFKNCHGK"
     gene            26900..27004
                     /locus_tag="O7798_000448"
     CDS             26900..27004
                     /locus_tag="O7798_000448"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499327.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDC2862724.1"
                     /translation="MLWEESFYFTSVKYFKKCEEVVKRCYVLSFKKSV"
     gene            27173..28283
                     /gene="prfB"
                     /locus_tag="O7798_000449"
     CDS             join(27173..27244,27246..28283)
                     /gene="prfB"
                     /locus_tag="O7798_000449"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014667688.1"
                     /ribosomal_slippage
                     /note="programmed frameshift; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide chain release factor 2"
                     /protein_id="HDC2862725.1"
                     /translation="MELSEIKRNIDKYNQDLTQIRGSLDLENKETNIQEYEEMMAEPN
                     FWDNQTKAQDIIDKNNALKAIVNGYKTLQAEVDDMDATWDLLQEEFDEEMKEDLEQEV
                     INFKAKVDEYELQLLLDGPHDANNAILELHPGAGGTESQDWANMLFRMYQRYCEKKGF
                     KVETVDYLPGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFAS
                     CDVIPDFNNDEIEIEINPDDITVDTFRASGAGGQHINKTESAIRITHHPSGIVVNNQN
                     ERSQIKNREAAMKMLKSKLYQLKLEEQAREMAEIRGEQKEIGWGSQIRSYVFHPYSMV
                     KDHRTNEETGKVDAVMDGDIGPFIESYLRQTMSHD"
     gene            28437..28544
                     /locus_tag="O7798_000450"
     CDS             28437..28544
                     /locus_tag="O7798_000450"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499329.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDC2862726.1"
                     /translation="MCLLKQHMQFAFSNITYGDFQGIELIIENVLNYMV"
     gene            28692..29531
                     /locus_tag="O7798_000451"
     CDS             28692..29531
                     /locus_tag="O7798_000451"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499330.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CHAP domain-containing protein"
                     /protein_id="HDC2862727.1"
                     /translation="MKKSLTVTVSSVLAFLALNNAAHAQQHGTQVKTPVQHNYVSNVQ
                     AQTQSPTTYTVVAGDSLYKIALEHHLTLNQLYSYNPGVTPLIFPGDVISLVPQNKVKQ
                     TKAVKSPVRKASQAKKVVKQPVQQASKKVVVKQAPKQAVTKTVNVAYKPAQVQKSVPT
                     VPVAHNYNKSVANRGNLYAYGNCTYYAFDRRAQLGRSIGSLWGNANNWNYAAKVAGFK
                     VDKTPEVGAIFQTAAGPYGHVGVVESVNPNGTITVSEMNYAGFNVKSSRTILNPGKYN
                     YIH"
     gene            29705..30355
                     /locus_tag="O7798_000452"
     CDS             29705..30355
                     /locus_tag="O7798_000452"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499331.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HD domain-containing protein"
                     /protein_id="HDC2862728.1"
                     /translation="MGVHQYFKRLSDMERLIRLPGKFKYFEHNVAAHSFKVTKIAQYL
                     ATVEEYHGRKINWKSLYEKALNHDFAEVFTGDIKTPVKYASSELKKLFSQVEEEMVET
                     FIEEEIPLQYRDVYKQRLQEGKDDSLEGQILSVADKIDLLYETFGEIQKRNPEELFFE
                     IYEMSLETIIQFDHLASVQDFINNIIPEMLTENFIPRTELRETTMNILNKRKEENE"
     gene            30352..30588
                     /locus_tag="O7798_000453"
     CDS             30352..30588
                     /locus_tag="O7798_000453"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499332.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CsbA family protein"
                     /protein_id="HDC2862729.1"
                     /translation="MIWYFSAAFFPCVLVVLFSVITRSKWVGTILTLILIGASIYKEY
                     FHNEWIIFIDVVSLLAGYLIIDQLEFHKHQDEDR"
     gene            30857..32842
                     /gene="uvrB"
                     /locus_tag="O7798_000454"
     CDS             30857..32842
                     /gene="uvrB"
                     /locus_tag="O7798_000454"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002473941.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="excinuclease ABC subunit UvrB"
                     /protein_id="HDC2862730.1"
                     /translation="MVEHYPFKIHSDFEPQGDQPQAIKEIVEGIKAGKRHQTLLGATG
                     TGKTFTMSNVIKEVGKPTLIIAHNKTLAGQLYSEFKEFFPENRVEYFVSYYDYYQPEA
                     YVPSTDTFIEKDASINDEIDQLRHSATSALFERDDVIIIASVSCIYGLGNPEEYKDLV
                     VSVRVGMEMDRSELLRKLVDVQYTRNDIDFQRGTFRVRGDVVEIFPASKEELCIRVEF
                     FGDEIDRIREVNYLTGEVLKEREHFAIFPASHFVTREEKLKVAIERIEKELEERLKEL
                     RDENKLLEAQRLEQRTNYDLEMMREMGFCSGIENYSVHLTLRPLGSTPYTLLDYFGDD
                     WLVMIDESHVTLPQVRGMYNGDRARKQVLVDHGFRLPSALDNRPLKFEEFEEKTKQLV
                     YVSATPGPYEIEHTDKMVEQIIRPTGLLDPKIEVRPTENQIDDLLSEIQTRVERNERV
                     LVTTLTKKMSEDLTTYMKEAGIKVNYLHSEIKTLERIEIIRDLRMGTYDVIVGINLLR
                     EGIDIPEVSLVVILDADKEGFLRSNRSLIQTIGRAARNDKGEVIMYADKMTDSMKYAI
                     DETQRRREIQMKHNEKHGITPKTINKKIHDLISATVENDENNDKAQTVIPKKMTKKER
                     QKTIDNIEKEMKQAAKDLDFEKATELRDMLFELKAEG"
     gene            32850..35696
                     /gene="uvrA"
                     /locus_tag="O7798_000455"
     CDS             32850..35696
                     /gene="uvrA"
                     /locus_tag="O7798_000455"
                     /EC_number="3.1.25.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499337.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="excinuclease ABC subunit UvrA"
                     /protein_id="HDC2862731.1"
                     /translation="MKEPSIVVKGARAHNLKDIDIELPKNKLIVMTGLSGSGKSSLAF
                     DTIYAEGQRRYVESLSAYARQFLGQMDKPDVDTIEGLSPAISIDQKTTSKNPRSTVAT
                     VTEIYDYIRLLYARVGKPYCPNHNIEIESQTVQQMVDRIMELEARTKIQLLAPVIAHR
                     KGSHEKLIEDIGKKGYVRLRIDGEIVDVNDVPTLDKNKNHTIEVVVDRLVVKDGIETR
                     LADSIETALELSEGQLTVDVIDGEDLKFSESHACPICGFSIGELEPRMFSFNSPFGAC
                     PTCDGLGQKLTVDVDLVVPDKDKTLNEGAIEPWIPTSSDFYPTLLKRVCEVYKINMDK
                     PFKKLTERQRDILLYGSGDKEIEFTFTQRQGGTRKRTMVFEGVVPNISRRFHESPSEY
                     TREMMSKYMTELPCETCHGKRLSREALSVYVGGLNIGEVVEYSISQALNYYKNIDLSE
                     QDQAIANQILKEIISRLTFLNNVGLEYLTLNRASGTLSGGEAQRIRLATQIGSRLTGV
                     LYVLDEPSIGLHQRDNDRLINTLKEMRDLGNTLIVVEHDDDTMRAADYLVDIGPGAGE
                     HGGQIVSSGTPQKVMKDKKSLTGQYLSGKKRIEVPEYRRPASDRKISIRGARSNNLKG
                     VDVDIPLSIMTVVTGVSGSGKSSLVNEVLYKSLAQKINKSKVKPGLYDKIEGIDQLDK
                     IIDIDQSPIGRTPRSNPATYTGVFDDIRDVFAQTNEAKIRGYQKGRFSFNVKGGRCEA
                     CKGDGIIKIEMHFLPDVYVPCEVCDGKRYNRETLEVTYKGKNIADILEMTVEEATQFF
                     ENIPKIKRKLQTLVDVGLGYVTLGQQATTLSGGEAQRVKLASELHKRSTGKSIYILDE
                     PTTGLHVDDISRLLKVLNRLVENGDTVVIIEHNLDVIKTADYIIDLGPEGGSGGGTIV
                     ATGTPEDIAQTKSSYTGKYLKEVLERDKQNTEDK"
     gene            36303..37235
                     /locus_tag="O7798_000456"
     CDS             36303..37235
                     /locus_tag="O7798_000456"
                     /EC_number="2.7.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499338.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HPr kinase/phosphorylase"
                     /protein_id="HDC2862732.1"
                     /translation="MLTTEKLVETLKLDLIAGEEGLSKPIKNADISRPGLEMAGYFSH
                     YASDRIQLLGTTELSFYNLLPDKDRAGRMRKLCRPETPAIIVTRGLQPPEELVEAAKE
                     LNTPLIVAKDATTSLMSRLTTFLEHALAKTTSLHGVLVDVYGVGVLITGDSGIGKSET
                     ALELVKRGHRLVADDNVEIRQINKDELIGKPPKLIEHLLEIRGLGIINVMTLFGAGSI
                     LTEKRIRLNINLENWNKQKLYDRVGLNEETLSILDTEITKKTIPVRPGRNVAVIIEVA
                     AMNYRLNIMGINTAEEFSERLNEEIIKNSHKSEE"
     gene            37241..38080
                     /locus_tag="O7798_000457"
     CDS             37241..38080
                     /locus_tag="O7798_000457"
                     /EC_number="2.4.99.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499339.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="prolipoprotein diacylglyceryl transferase"
                     /protein_id="HDC2862733.1"
                     /translation="MGIVFNYIDPVAFNLGPLSVRWYGIIIAVGILLGYFVAQRALVK
                     AGLHKDTLVDIIFYSALFGFIAARIYFVIFQWPYYAENPSEIIKIWHGGIAIHGGLIG
                     GFIAGVIVCKVKNLNPFQIGDIVAPSIILAQGIGRWGNFMNHEAHGGSVSRAFLEQLH
                     LPNFIIENMYINGQYYHPTFLYESIWDVAGFIILVNIRKHLKLGETFFLYLTWYSIGR
                     FFIEGLRTDSLMLTSNIRVAQLVSILLILISISLIVYRRIKYNPPLYSKVGALPWPTK
                     KVK"
     gene            38088..38573
                     /locus_tag="O7798_000458"
     CDS             38088..38573
                     /locus_tag="O7798_000458"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499340.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetyltransferase"
                     /protein_id="HDC2862734.1"
                     /translation="MRKFLSKTHHHTNPLWRVYRLVKFSKVFKNVIIIEFSKFIPSMV
                     LKRHIYKQLLNINIGNQSSIAYKVMLDIFYPELITIGSNSVIGYNVTILTHEALVDEF
                     RYGPVTIGSNTLIGANATILPGITIGDNVKVAAGTVVSKDIPDNGFAYGNPMYIKMIR
                     R"
     gene            38581..40020
                     /locus_tag="O7798_000459"
     CDS             38581..40020
                     /locus_tag="O7798_000459"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499341.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HDC2862735.1"
                     /translation="MAQKNNNVIPMTFDDAFYRKMAKQKFKQREYKRAAEYFEKVLEL
                     SPDDLEIQIDYAQCLVQLGIAKKAEHLFYDNIIYNRHLEDSFYELSQLNIEVNEPNKA
                     FLFGINYVIVSDDQDYRDELDQMFDVKYQSEEQIELEAQLFVVQILFQYLFSQGRLKD
                     AKNYVLHQPQEVQDHRVVRNLLAMCYLYLGEYDTAKALYEALLQEDSTDIYALCHYTL
                     LLYNTKENEQYQKYLKILNKVVPMNDDESFKLGIVLSYLKQYRASQQLLYPLYKKGKF
                     LSIQMYNALAYNYYYLGEEDESHYYWDKLKQISKVEIGHAPWVIENSKEVFDQHILPL
                     LQSDDSHYRLYGIFLLDQLNGKEIVMTESIWQVLENLNNYEKLYLTYLVQGLTLNKLD
                     FIHRGLLTLYHNELFVSENDVMVAWINQGELIIAEKVDLTDVEPYIGAFIYLYFKNQP
                     RNVTKKQITTWLGITQYKLNKMIEFLLSI"
BASE COUNT        14359 a         5601 c         7272 g        12789 t
ORIGIN      
        1 atcgcctctt ttatataaaa ttaacgtatt tatattagca taaaacaaca tgttgtgcat
       61 aaatagttga aatttactat aaaaagacta taatagactg tagcgaacaa acgttctgtg
      121 tttatttgtc ggaataatag ggcattacac ttttatgaat gtttgtgtta ttacataaaa
      181 caaatatcaa ttcagtatca agctaataag ctttttcttg atttctgttg atacaattga
      241 gattgacaca gatttaaaaa aatcaagtga tatctactaa aaaatttttt taaatttgtt
      301 caagtttttc taatttagta ttggtgccta gttggaacgt tttacgaaca ttcgattaga
      361 aaatggcact ttaaatcata gtgtgtctta tgtataatga aacacataat atagtgttgg
      421 tgaaacgaaa aagacacaat atcttgtgtt ttgtatgcaa atgctttatt tatgaagaaa
      481 ttacatttaa aagtaattta acacagaaat ttaatagtta ttatcaatta atagtcatat
      541 ttttagaaaa tgtactgagc aaatggaaga tatccaatga tgtaaacact acatatagtg
      601 atttttatac attcaaccca tataagctac tattttctca aatataaatc tatgcaattg
      661 gtttacattt gagaaaataa gtagcttcat tatagttaat acaatgctga gataaccata
      721 gtaaccatgt tgttaaagca ttttttaatt ggaatgacta ctttatttaa aagggttgaa
      781 gaaagaaggt gatccaatga aaataatata tttttcattt actggaaatg tccgtcgttt
      841 tattaagaga acagaacttg aaaatacgct tgagattaca gcagaaaatt gtatggaacc
      901 agttcatgaa ccgtttatta tcgttactgg cactattgga tttggagaag taccagaacc
      961 cgttcaatct tttttagaag ttaatcatca atacatcaga ggtgtggcag ctagcggtaa
     1021 tcgaaattgg ggactaaatt tcgcaaaagc gggtcgcacg atatcagaag agtataatgt
     1081 ccctttatta atgaagtttg agttacatgg aaaaaacaaa gacgttattg aatttaagaa
     1141 caaggtgggt aattttaatg aaaaccatgg aagagaaaaa gtacaatcat attgaattaa
     1201 ataatgaggt cactaaacga agagaagatg gattctttag tttagaaaaa gaccaagaag
     1261 ctttagtagc ttatttagaa gaagtaaaag acaaaacaat cttcttcgac actgaaatcg
     1321 agcgtttacg ttatttagta gacaacgatt tttatttcaa tgtgtttgat atttatagtg
     1381 aagcggatct aattgaaatc actgattatg caaaatcaat cccgtttaat tttgcaagtt
     1441 atatgtcagc tagtaaattt ttcaaagatt acgctttgaa aacaaatgat aaaagtcaat
     1501 acttagaaga ctataatcaa cacgttgcca ttgttgcttt atacctagca aatggtaata
     1561 aagcacaagc taaacaattt atttctgcta tggttgaaca aagatatcaa ccagcgacac
     1621 caacattttt aaacgcaggc cgtgcgcgtc gtggtgagct agtgtcatgt ttcttattag
     1681 aagtggatga cagcttaaat tcaattaact ttattgattc aactgcaaaa caattaagta
     1741 aaattggggg cggcgttgca attaacttat ctaaattgcg tgcacgtggt gaagcaatta
     1801 aaggaattaa aggcgtagcg aaaggcgttt tacctattgc taagtcactt gaaggtggct
     1861 ttagctatgc agatcaactt ggtcaacgcc ctggtgctgg tgctgtgtac ttaaatatct
     1921 tccattatga tgtagaagaa tttttagata ctaaaaaagt aaatgcggat gaagatttac
     1981 gtttatctac aatatcaact ggtttaattg ttccatctaa attcttcgat ttagctaaag
     2041 aaggtaagga cttttatatg tttgcacctc atacagttaa agaagaatat ggtgtgacat
     2101 tagacgatat cgatttagaa aaatattatg atgacatggt tgcaaaccca aatgttgaga
     2161 aaaagaaaaa gaatgcgcgt gaaatgttga atttaattgc gcaaacacaa ttacaatcag
     2221 gttatccata tttaatgttt aaagataatg ctaacagagt gcatccgaat tcaaacattg
     2281 gacaaattaa aatgagtaac ttatgtacgg aaattttcca actacaagaa acttcaatta
     2341 ttaatgacta tggtattgaa gacgaaatta aacgtgatat ttcttgtaac ttgggctcat
     2401 taaatattgt taatgtaatg gaaagcggaa aattcagaga ttcagttcac tctggtatgg
     2461 acgcattaac tgttgtgagt gatgtagcaa atattcaaaa tgcaccagga gttagaaaag
     2521 ctaacagtga attacattca gttggtcttg gtgtgatgaa tttacacggt tacctagcaa
     2581 aaaataaaat tggttatgag tcagaagaag caaaagattt tgcaaatatc ttctttatga
     2641 tgatgaattt ctactcaatc gaacgttcaa tggaaatcgc taaagagcgt ggtatcaaat
     2701 atcaagactt tgaaaagtct gattatgcta atggcaaata tttcgagttc tatacaactc
     2761 aagaatttga acctcaattc gaaaaagtac gtgaattatt cgatggtatg gctattccta
     2821 cttctgagga ttggaagaaa ctacaacaag atgttgaaca atatggttta tatcatgcat
     2881 atagattagc aattgctcca acacaaagta tttcttatgt tcaaaatgca acaagttctg
     2941 taatgccaat cgttgaccaa attgaacgtc gtacttatgg taatgcggaa acattttacc
     3001 ctatgccatt cttatcacca caaacaatgt ggtactacaa atcagcattc aatactgatc
     3061 agatgaaatt aatcgattta attgcgacaa ttcaaacgca tattgaccaa ggtatctcaa
     3121 cgatccttta tgttaattct gaaatttcta cacgtgagtt agcaagatta tatgtatatg
     3181 cgcactataa aggattaaaa tcactttact atactagaaa taaattatta agtgtagaag
     3241 aatgtacaag ttgttctatc taacaattaa atgttgaaaa tgacaaacag ctaatcatct
     3301 ggtctgaatt agcagatgat tagactgcta tgtctgtatt tgtcaattat tgagtaacat
     3361 tacaggagga aattatattc atgatagctg ttaattggaa cacacaagaa gatatgacga
     3421 atatgttttg gagacaaaat atatctcaaa tgtgggttga aacagaattt aaagtatcaa
     3481 aagacattgc aagttggaag actttatctg aagctgaaca agacacattt aaaaaagcat
     3541 tagctggttt aacaggctta gatacacatc aagcagatga tggcatgcct ttagttatgc
     3601 tacatacgac tgacttaagg aaaaaagcag tttattcatt tatggcgatg atggagcaaa
     3661 tacacgcgaa aagctattca catattttca caacactatt accatctagt gaaacaaact
     3721 acctattaga tgaatgggtt ttagaggaac cccatttaaa atataaatct gataaaattg
     3781 ttgctaatta tcacaaactt tggggtaaag aagcttcgat atacgaccaa tatatggcca
     3841 gagttacgag tgtattttta gaaacattct tattcttctc aggtttctat tatccactat
     3901 atcttgctgg tcaagggaaa atgacgacat caggtgaaat cattcgtaaa attcttttag
     3961 atgaatctat tcatggtgta tttaccggtt tagatgcaca gcatttacga aatgaactat
     4021 ctgaaagtga gaaacaaaaa gcagatcaag aaatgtataa attgctaaat gacttgtatt
     4081 taaatgaaga gtcatacaca aaaatgttat acgatgatct tggaatcact gaagatgtgc
     4141 taaactatgt taaatataat ggaaacaaag cactttcaaa cttaggcttt gaaccttatt
     4201 ttgaggaacg tgaatttaac ccaatcattg agaatgcctt agatacaaca actaaaaacc
     4261 atgacttctt ctcagtaaaa ggtgatggtt atgtattagc attaaacgta gaagcattac
     4321 aagatgatga ctttgtattt gacaacaaat aacaattaaa ttaaaagacc ttcacatgta
     4381 aagggaaata gcgattcgtt tcgtcttgtc tcctacatgt tgaaggtctt tttttatgtg
     4441 tatctaactc attatgagtc tgagtaagaa atcaatgctc taagatgtac aatgctattt
     4501 atattggcag tagttggcgg ggccccaaca cagaagcagg cggaaagtca gctaacaata
     4561 ttgtgcaagt tcgggcgggg ccccaacata aagaaaaact ttttccttta gaaattatca
     4621 cttccacatg agttttactc atgtattcct atttttaagt acacattagc tgaggctaat
     4681 gttaagaacc actacttaat caatcattag tagtttttat catttccact attcccagac
     4741 atcaaaatct taagtgttct attttacttt aagtaaacaa aatacacatt ccgaaaaatt
     4801 aaatttcagt ttaattgcaa atatcaataa aattgacact aaattatttg aaaggctatt
     4861 gaaattatgg tcaaaaaacg ctactattaa tgagaaatat tatcaatgat aatgattatc
     4921 attaatttaa agggagaaaa atttgtaatg aagtatttat taaagggaaa tattttgctt
     4981 ctattactaa tattgttgac aattatttcg ttgttcatag gtgtgagtga actatcaatt
     5041 aaaggtttac tacatttaac tgagtcacag cggaatattt tattctcaag ccgaatacca
     5101 aggacgatga gtattttaat tgctggaagt tcgttggctt tagcaggctt gataatgcaa
     5161 caaatgatgc aaaataagtt tgttagtccg actacagctg gaacgatgga atgggctaaa
     5221 ctaggtattt taattgcttt attgttcttt ccaaccggtc atattttatt aaaactagta
     5281 tttgctgtta tttgcagtat ttgcggtacg tttttatttg ttaaaatcat tgattttata
     5341 aaagtgaaag atgtcatttt tgtaccgctt ttaggaatta tgatgggtgg gattgttgca
     5401 agtttcacaa ccttcatctc attgcgcacg aatgctgttc aaagcattgg taactggctt
     5461 aacgggaact ttgccattat cacaagtgga cgctatgaaa ttttatattt aagtattcct
     5521 cttttagcat tgacatatct ttttgctaat catttcacga ttgtaggaat gggtaaagac
     5581 tttactaata atttaggttt gagttacgaa aaattaatta acatcgcatt gtttattact
     5641 gcaactatta cagcattggt agtggtgact gttggaacat taccgttctt aggactagta
     5701 ataccaaata ttatttcaat ttatcgaggt gatcatttga aaaatgctat ccctcatacg
     5761 atgatgttag gtgccatctt tgtattattt tctgatatag ttggcagaat tgttgtttat
     5821 ccatatgaaa taaatattgg tttaacaata ggtgtatttg gaacaatcat tttccttatc
     5881 ttgcttatga aaggtaggaa aaattatgcg caacaataat aaaaaaataa tgcttttaat
     5941 tgcagtaacg ttattaatta gtatgctgta cttatttgta ggtattgatt ttgaaatatt
     6001 tgaatatcaa ttttcaagtc gtttaagaaa gttcatatta attattttag taggtgctgc
     6061 cattgcaact tcagtggtga tttttcaagc gattacaaat aaccgtctat tgacaccatc
     6121 aataatgggg ttagatgcag tttatttatt tatcaaagta ttgccagtct ttttatttgg
     6181 aattcaatcg gtatgggtta ctaatgtata tttgaacttt atattaacac ttataacgat
     6241 ggtgttattc gcactaatcc tattccaagg tatctttaaa atcggacatt tttcaattta
     6301 ttttatctta cttatcggtg tccttttagg aacatttttt agaagcataa caggttttat
     6361 tcaactgatt atggatcctg agtcattttt agcaatacaa agtagtatgt ttgctaattt
     6421 taatgcttct aattcgaatt tagttacttt ctcagcagtg ctattagtaa tcttattagt
     6481 cattacaatt ttactattgc cttatttaga tgtattgctt ttaggtcgtg ttgaagcaat
     6541 taatcttggg atatcgtatg aaaaattaac gcgaattcta cttgtaatag tctcagtttt
     6601 agtttctgtg tcaactgcat tagtaggacc aattacattt ttaggtttat taactgtaaa
     6661 tctagcgcat gaactaatga agacgtatga acataagtat attttaattg cgacaatttg
     6721 cttgagttgg attagtttat ttagtgcgca atgggtagtt gaaaatgtgt ttgaagctac
     6781 gacagaaatg agtatactta ttgatttgat tggtggaagt tatttcattt atctattagt
     6841 tagaaggaga aatgcgcaat gattcaagtt gaaaatttaa ctaaaactat aaataatcaa
     6901 atgatattgg aagatattag catagatatc gaaaaaggta aattgacttc tttaattgga
     6961 cctaatggtg cgggtaagag tactttactt tcagcgatat gtaggttaat tcgttttgag
     7021 aacggtgaag tgaaaataga tggacagctc atgtctgatt ataaaaataa tgacttgtcg
     7081 aaaaaaatat ctatattaaa acaaacaaac catactgaaa tgaatattac ggtagagcag
     7141 ttggtaaact ttggacgatt cccttattct aaaggtcgtt tgacgaaaga ggatcatgat
     7201 attgtcaatg atgcgctaga tttgttgcaa ctacaagata tcagaaatcg taatattaag
     7261 tcattatctg gtggacaacg tcagcgtgca tacattgcaa tgacaatagc acaagatact
     7321 gaatatattt tgctagatga accattaaat aatttagata tgaagcatgc tgttcaaatt
     7381 atgcaaacgt taaaaatgtt agcgcataaa atgaataaag cgattgtcat tgtgttacat
     7441 gatattaact ttgcgtcctg ttattcagat cagattgtag cattgaaaaa cggacaacta
     7501 gttaagtcag atttgaaaga taatgtcatt caaagtagtg ttttaagtga tttatatgac
     7561 atgaatattc aaattgaaca tataagaaat caaaggattt gtttatattt taaggattga
     7621 taatttggag acactttaaa ggggtgatgc gccaattaaa gaagggttaa acgtaaagca
     7681 tttatttata tttcacatca agcacacaga ttaagccaaa agaggagaat attatattat
     7741 gaagaaaaca gtcttatatt tagtattagc agtaatgttt ttattagcgg catgcggtaa
     7801 caattctgat aaagaacaat caaaatcaga aactaaaggt tctaaagata cagtaaaaat
     7861 tgaaaataac tataaaatgc gtggcgagaa aaaagatggt agtgacgcta aaaaagttaa
     7921 agaaactgtt gaagtaccaa aaaatcctaa aaatgcagtt gtgttagact atggcgcatt
     7981 agatgtaatg aaagaaatgg gcttatcaga taaagtaaaa gcattaccta aaggggaagg
     8041 cggtaagtca ttaccgaatt tcttagaatc atttaaagat gataaatata caaacgttgg
     8101 taatttaaaa gaagtgaatt ttgataaaat tgctgcgacg aaacccgaag taatctttat
     8161 ctctggacgt acagctaatc aaaagaattt agatgaattc aaaaaagctg cacctaaagc
     8221 gaaaattgtt tatgttggtg cagatgaaaa gaacttaatt ggttcaatga aacaaaacac
     8281 tgaaaatatc ggaaaaattt acgataaaga agataaagct aaagaattaa ataaagattt
     8341 agataacaaa attgcttcaa tgaaagataa aacgaaaaac ttcaataaaa ctgttatgta
     8401 tttactagtt aacgaaggtg aattatcaac atttggacct aaaggtcgtt ttggtggatt
     8461 agtttacgat acattaggat tcaatgcagt tgataaaaaa gtaagtaata gcaatcatgg
     8521 acaaaatgtt tctaacgaat atgttaataa agaaaatcca gatgttattt tagcgatgga
     8581 tagaggtcaa gcgataagtg gtaaatcaac tgcgaaacaa gcattaaata atcctgtatt
     8641 aaaaaatgtt aaagcaatta aagaagacaa agtatataat ttagatccta aattatggta
     8701 ctttgcagct ggatcaacta caactacaat taaacaaatt gaggaacttg ataaagttgt
     8761 aaaataattt taaaagaggg gaacaatggt taaaggtctt aatcattgct cccctctttt
     8821 ctttaaaaaa ggaaatctgg gacgtcaatc aatgtcctag actctaaaat gttctgttgt
     8881 cagtcgttgg ttgaatgaac atgtacttgt aacaagttca tttcaatact agtgggctcc
     8941 aaacatagag aaatttgatt ttcaatttct actgacaatg caagttggcg gggcccaaac
     9001 atagagaatt tcaaaaagga attctacaga agtggtgctt tatcatgtct gacccactcc
     9061 ctataatgtt ttgactatgt tgtttaaatt tcaaaataaa tatgatagtg atatttacag
     9121 cgattgttaa accgagattg gcaatttgga caacgctcta ccatcatata ttcattgatt
     9181 gttaattcgt gtttgcatac accgcataag attgcttttt cgttaaatga aggctcagac
     9241 caacgcttaa tggcgtgctt ttcaaactca ttatggcact tatagcatgg atagtattta
     9301 ttacaacatt taaatttaat agcaataata tcttcttcgg taaaataatg gcgacagcgt
     9361 gtttcagtat cgattaatga accataaact ttaggcatag acaaagctcc ttaacttacg
     9421 attcctttgg atgttcacca ataatgcgaa cttcacgatt taattcaatg ccaaattttt
     9481 ctttgacggt cttttgtaca taatgaataa ggttttcata atctgtagca gttccattgt
     9541 ctacatttac cataaaacca gcgtgtttgg ttgaaacttc aacgccgcca atacggtgac
     9601 cttgcaaatt agaatcttgt atcaatttac ctgcaaaatg accaggcggt ctttggaata
     9661 cactaccaca tgaaggatac tctaaaggtt gtttagattc tctacgttct gttaaatcat
     9721 ccattttagc ttgtatttca gtcattttac caggagctaa agtaaatgca gcttctaata
     9781 caactaagtg ttctttttga ataatgctat tacgataatc taactctaat tcttttgttg
     9841 taagtttaat taacgagcct tgttcgttta cgcaaagcgc atagtctata caatctttaa
     9901 cttcgccacc ataagcgcca gcattcatat acactgcacc accaattgaa cctggaatac
     9961 cacatgcaaa ttcaaggcca gtaagtgcgt aatcacgagc aacacgtgag acatcaataa
    10021 ttgcagcgcc gctaccggct attatcgcat catcagatac ttcgatatga tctagtgata
    10081 ataaactaat tacaataccg cgaataccac cttcacggat aataatattt gagccatttc
    10141 ctaaatatgt aacaggaatc tcattttgat aggcatattt aacaactgct tgtacttctt
    10201 catttttagt aggggtaatg taaaagtcgg cattaccacc tgttttagta taagtgtatc
    10261 gttttaaagg ttcatcaact ttaatttttt catttgggat aagttgttgt aaagcttgat
    10321 agatgtcttt atttatcact tctcagtaca tcctttctca tgtctttaat atcatatagt
    10381 attataccaa ttttaaaatt catttgcgaa aattgaaaag aaagtattag aattagtata
    10441 attataaaat acggcattat tgtcgttata agtatttttt acatagtttt tcaaagtatt
    10501 gttgcttttg catctcatat tgtctaattg ttaagctatg ttgcaatatt tggtgttttt
    10561 ttgtattgaa ttgcaaagca atatcatcat tagttgataa gaggtaatca agtgcaagat
    10621 aagattcaaa tgtttgggta ttcatttgaa tgatatgtag acgcacctgt tgttttagtt
    10681 catgaaaatt gttaaacttc gccatcataa ctttcttagt atatttatga tgcaaacgat
    10741 aaaaccctac ataatttaag cgtttttcat ctaaggatgt aatatcatgc aaattttcta
    10801 cacctactaa aatatctaaa attggctctg ttgaatattt aaaatgatgc gtaccgccaa
    10861 tatgttttgt atattttact gggctgtcta agaggttgaa taataatgat tcaatttcag
    10921 tgtattgtga ttgaaaacaa ttagttaaat cactattaat gaatggttga acatttgaat
    10981 acatgataaa ctcctttgat attgaaaatt aatttaatca cgataaagtc tggaatacta
    11041 taacataatt cattttcata ataaacatgt ttttgtataa tgaatctgtt aaggagtgca
    11101 atcatgaaaa aaattgttat tatcgctgtt ttagcgattt tatttgtagt aataagtgct
    11161 tgtggtaata aagaaaaaga ggcacaacat caatttacta agcaatttaa agatgttgag
    11221 caaaaacaaa aagaattaca acatgtcatg gataatatac atttgaaaga aattgatcat
    11281 ctaagtaaaa ctgatacaac tgataaaaat agtaaagaat ttaaggcact acaagaagat
    11341 gttaaaaacc atctcatacc taaatttgaa gcatattata agtcagcaaa aaatttgcct
    11401 gatgatacaa tgaaagttaa gaaattaaaa aaagaatata tgacgcttgc aaatgagaag
    11461 aaggatgcga tatatcaatt aaaaaaattc ataggtttat gtaatcaatc tatcaagtat
    11521 aacgaagaca ttttagatta tacgaaacaa tttgaaaaaa atagatacaa agttgaatca
    11581 gaaattaaat tagctgataa taaaagtgaa gcaactaatc ttacgacaaa attagaacat
    11641 aataataaag cgttaagaga tactgcgaag aagaacctag atgatagtaa agaaaatgaa
    11701 gtaaaaggcg cgattaaaaa tcacattatg ccaatgattg aaaagcaaat taccgatatt
    11761 aaccaaacta atattagtga taagcatgtt aataatgcaa ggaaaaacgc aatagaaatg
    11821 tattacagtc tgcagaacta ttataataca cgtattgaaa caataaaggt tagtgagaag
    11881 ttatcaaaag tcgatgtaga taagttgccg aaaaagggta tagatataac tcacggcgat
    11941 aaagcctttg aaaaaaagct tgaaaaatta gaagaaaaat aactataatc atttttcaaa
    12001 gttaaaaatt ttgaatttat ggttaacatg tcaacttact atgtgtataa tggtaaacat
    12061 tgatattaac tatatgtata aaaatgtcac gcagatgcta tttaaatgtg ataaatattt
    12121 ttagaggtga atagagtggc tataaagcta agttcaattg accaatttga acaggttatt
    12181 gaggaaaata aatatgtttt tgtattaaaa catagtgaaa cttgtccaat atcggcaaat
    12241 gcgtacgatc aatttaataa atttttatat gaacgcgata tggacggtta ttatttgatt
    12301 gtccaacaag aacgcgattt gtcagattat attgctaaaa aaacgaacgt taaacatgaa
    12361 tcacctcaag cattttattt tgtaaatggt gaaatggttt ggaatcgaga ccacggtgat
    12421 atcaatgtgt cgtcattagc acaagcagaa gaataatgaa actatagggt tggaacattt
    12481 tgccttacac tactagacgt gaatagcaca acttaaattc gtgtgaatca gagtagtttg
    12541 gctataatga tgttctgacc ttttatttta tgtcaccttt agaagcagtt aagttagtac
    12601 ttttttacaa acatatgtat aatatattcg agtattttta ttgaaaatat tttggaaaac
    12661 gacgaatcca ataagaaaat ttaaacatga tttgtaagtt agtttaatag gaaatatatg
    12721 ctaaaccaaa agaagcatat tgttatttac tggaataatt aataatcatg tcatgttaaa
    12781 tgttcgcata taatcacgag ataaaatcta aaatttaaga ttaatctttt atgaataaaa
    12841 aacgtatcac aacaaataat aaagtaaggt ggtcaaggtt atgaaagtat tagtagccat
    12901 ggatgagttt catggaatta tttcaagtta tcaagctaat agatatgttg aagaggcagt
    12961 tgcaagccaa attgaaactg cagatgtagt tcaagtacca ttgtttaatg gaagacatga
    13021 attattagat tctgtatttt tatggcaatc tgggcaaaag tatcgtatac cagtacatga
    13081 tgcagatatg aatgaagttg aaggtgttta cggacaaact gatacaggga tgaccgttat
    13141 cgaggggaat ttatttttaa aaggtaaaaa accaattgtt aaacgaacaa gttatggttt
    13201 aggagaaatg attaaacatg cattagataa cgacgcaaaa catgttgtaa tttcactagg
    13261 tgggattgat agttttgatg ctggtgcagg tatgttacaa gcattaggtg ctcaattcta
    13321 tgatgacgaa gggcgtgtcg tagatatgag acaaggtgct ggtgtaatta aatatattcg
    13381 tcgtatggat atgtcgaact tacaccctaa aatggaaaca gcaagaattc aagtaatgtc
    13441 ggatttttca agtcgattat atggtaagca aagtgaaatc atgcaaactt atgatgcgca
    13501 tcagttgaat cataatcaag cagcagaaat cgataattta atttggtatt ttagtgagtt
    13561 atttaaaagt gaattgaaaa ttgcaattgg tccagttgaa cgtggtggtg ctggtggtgg
    13621 aattgcagca gtcttgaatg gactgtatca agctgaaata ttaaccagtc atgcattagt
    13681 agaccaacta acacatttag aaaatttagt tgaacaagcg gatttaatta tttttggaga
    13741 aggattaaat gaaaatgatc agttgctaga aacgacaaca ttgcgtattg cagaactttg
    13801 tcataaacat caaaaggttg ccattgcaat ttgtgcaact gctgaaaagt ttgatttatt
    13861 tgaatcacaa ggggttacag caatgtttaa tacatttatc gatatgccag aaacttatac
    13921 tgactttaaa atggggttac aaattaggca ttatacggtt cagtctttaa aactgttgaa
    13981 aacacatttt aatgttgagg tttagtaaag aaggactaaa ttggtgatgc tgtcatgatg
    14041 gttaataaca tttatgatgg ttagcaaaac gaattagaag atcgaaagta tacgtaaaaa
    14101 atatgaaaaa tcacgctatc attgcactga atgttagcgt gatttttata tattaattaa
    14161 gcctgagttg aactagtata taatcgttgg tttttagtga ttttcagcga tatcttctac
    14221 aattccaatg attacttgta ctgctttttc cataacatca atggatgcat attcatatgg
    14281 gccgtggaag ttaccgcaac ctgtaaagat gtttggagtt ggtaacccca taaatgacaa
    14341 ttgtgaacca tctgtaccac cgcgaatagg ttcagtgttt gctggaatat ctaatttggc
    14401 aaagacacgt ttaggtatat caataatatg aggcaatggt aatatttttt ctgccatatt
    14461 gaaatattga tccgatatat caactttaac tggataattt tcaaaatggg cattgatatc
    14521 gtcacgtatt tctaaaatac gtttcttacg caattcgaat tgttttttat catgatcacg
    14581 aataatgtat tgcaaagttg ctttttcaac agttccttca aagttcatta agtgataaaa
    14641 gccttcgtat ccttctgttc gctccggaac ttcactatca ggtagcaaac tatcgaattg
    14701 ttcacctaaa cgtattgcgt ttaccattgc atttttagct gaaccaggat gaacatttat
    14761 accgtggcat gtaataaccg cttcagcagc gttaaagctt tcatattgta attctccata
    14821 ttgactacca tccatagtat aagcaaaatc agcattgaag cggtcaacat caaatttatg
    14881 tggaccacga ccgatttctt cgtctggtgt aaatccaatg cgaatggtac catgtttaat
    14941 ttctggatgt tcttgtaaat aacaaatagc ttccataatt tccacaatac ccgctttatc
    15001 gtctgcacct agtaacgatg taccatcagt taccattaat gtatgaccaa ctaaactgtt
    15061 aagttctgga aatactttag gatctaagac acgtttagta ttgcctagtt tgtatggctt
    15121 accatcatag ttttcaataa tttgcggttt aacatttgaa gcattgaaat caggtgatgt
    15181 atcaacatgc gccaaaaatc caactgttgg gacgtcgaca tcgatgttac tttctaatgt
    15241 agcaaataag tagccatttt catctaaatc agttggcaat cctaattgtt gtaattcttt
    15301 ttctaataaa tgtaacaaat cccattgctt ttcagttgaa ggtgttgttg tagattttgg
    15361 atcagattgc gtatcaattg tcgtatatct tgttaatcta tctatcaatt ggttcttcat
    15421 tatattcgac cccttaaact ctattattca tgttgtaaga ttttttatat gtcttacctt
    15481 tgattttacc atacagttgt ttgatacgtg tgtataggta atatagaatt tcagaaacta
    15541 atataccgaa agcaatcgca cctgaaatca gtgtaacttc taaaaatgta tttacagcac
    15601 ttgtataatc atttgatact aaaaaacgag tcgcttgata agctgcacca ccaggtacta
    15661 atggtataat gcctggcact atgaatataa ttaccggtcg tttatatctg cgactcatag
    15721 tatgactcat taagcctaaa attaagcttc ccaaaaatga agcgccaact tttccaaact
    15781 ctaaatctac cgttaattgg taaatcgtcc atgcaatggc acccacaaat ccacatgcta
    15841 ctaagaggcg tttgggtgca ttgaaaatga tagagaaaag tactgttgat ataaagctga
    15901 ttgtaaaatg aaataaataa aatagcatgc tttaacagtc cttccttaaa tgattaataa
    15961 aacgattgcg acaccagcac cgattgcgaa tgctgttaat gcagcttcaa caccgcgaga
    16021 catacctgca agtaattcac ccgctaataa atctcgaatg gcattggtaa ttaatatacc
    16081 agggacaagt ggcatgacac tggctatagt aatgatatct tgattggttg caatgcctaa
    16141 tttagtaaat gtggctgcaa tggatatgac cacagcggct gcaacaaact ctgagaaaaa
    16201 tttaatttgt atatagcgtt gcacaaagct gaatgttaaa aatgcggatc cgccagcaat
    16261 gactgcaatc caacaatctg atgcgacacc accaaacata aataggaaga agccacatgc
    16321 aatggcagct gcaaagaaat tcgttaaaaa agaatattgt aatgatgcat gctgtaaatg
    16381 aataaattca gatttagctt catcaattgt gagttcttta tttgatattt tacgtgaaag
    16441 actattcgtt aaagcgattt tctctaaatc tgttgtacgc tcttgtacac gaattaatct
    16501 tgtacttgtt cgatcgttta atgaaaaaat aattgcagtt gaactgacaa aactatatgt
    16561 attatgaaga ccataactat gtgcgatacg gttcattgta tcttcaactc gatatgtttc
    16621 agcacctgat tcaagtaaaa ttctacctgc aattaataca acatcaatca ctttgttttc
    16681 atctataatt gtgattgaat ctggcatatc aattcacctc caatgatatg tgttatttat
    16741 ttgaacaatt gaagtttaca acttgttgtt acaactttca atagtgagac tttgtgttag
    16801 tatgatgaac ttgtatggtt caaatttaaa taagaaaaac tgttaatctt tgctattata
    16861 ctatgattta ataatagcaa aggattaaca gttttgtcgt tgttataaat tgataatagg
    16921 gttaaacatt actttgtttc gcccttgatt tttggctaca tgcaccatat cgtctgcatc
    16981 tttaaacact ttacgctgtg attttggatc gtcatctgtt aaataaccaa caccgataga
    17041 cactgacaat ttaataactt ctttgtttgg taaatggaat gatgattttt caacacccga
    17101 acgaatattt tcagctaatt taacactttg atcaagtgaa taattgtgaa tgacaactga
    17161 gaactcttcg ccaccatttc taaaaatttt aaattgattc ggcacatagt ttttaagtaa
    17221 ttgagacatt tgttttaata cagcatcacc tgatttgtgt gagtaggtat cattgacatc
    17281 tttaaatcca tcgatatcga ttaataataa tgcgatactt tgatgttctt tttcagcttt
    17341 tcgtgaaatt tcatttaaat gtctatcaaa ttcttttaca ttacctaagc ctgttaagta
    17401 atcatattta tcttcgtttt cataacgatt tacgagtgag aagaaatgcc aaatatcgac
    17461 aaatgttatc gctgaagcta aagtgataat taatgaaatt ggtattaaaa tgataacttc
    17521 cgatagtgtg taaataggac tcactaacgc gacaccaaat aaaatgatta ttgtaacaac
    17581 attaagtatt aataatgata gcacatcatt ttgttttaaa aatggtccaa tagcacttgt
    17641 tactgcagca ataacaatca acgtaacacc gtacataatc gagttgttaa atactacaat
    17701 ttcaacaatt gctacaatta ctgtggcaga taatgtatag accatatttg taaatctacc
    17761 taaaaacaat aaaggaacga atgttaagtg aattaaataa tcttcacgat aagggatagg
    17821 gtagacagat aataataatg atacgattgt cattaaaaca gtgacataag ccttagaaaa
    17881 aaccatacgt ttgttttctg aatactgtaa gcgatggaat aaatagattc cagcgactat
    17941 aacagatata ttgtatataa atgcttcgaa catgtctgaa tcgactcctt taattgacca
    18001 ctagctattg taagtgaaaa cttacaattt gtcattagtt tacatataaa attaatgtat
    18061 gatatagact ttgatgttaa aatgttgcct taaatgatat gatgaaaaaa tgaataatag
    18121 gcgatatata agaaatgaat cgtatagttg taaatatgat atcattgatt gaacgaatta
    18181 atttataata aagctataag atatacgtag aaaatagata tatcattcta taaagacaat
    18241 attaaataaa tataacgtta aaaacaatta atatcgatga aggtgaataa atggttacat
    18301 tattactagt tgcagtaaca atgattgtca gtttgacgat aacaccaatt gttattgcaa
    18361 tatcgaaaag attaaattta gttgataaac caaattttag aaaagtacac actaaaccta
    18421 tttcagttat gggtggtaca gtgattctct tttcattttt aataggtatt tggattggtc
    18481 atcctattga aacagaaatc aaaccactta ttattggtgc gattattatg tacgtacttg
    18541 ggcttgtaga tgatatctac gatttgaaac cgtatataaa attggctggt caaattgccg
    18601 ctgccttagt agttgctttt tatggtgtga ctattgattt tatttcgttg ccaatgggta
    18661 caacgattca ttttggattt cttagtattc caattactgt gatttggatt gttgctatta
    18721 caaatgcaat taacttaatt gatggactcg atggtttggc gtcgggtgtt tctgcaatcg
    18781 gactcattac aatagggttc attgcaattt tacaagctaa tattttcata acgatgattt
    18841 gttgtgtttt attaggctct ttaattgggt ttttatttta caatttccat cctgccaaaa
    18901 tatttttagg tgatagtggg gctttaatga ttggatttat catcggattc ctttctttac
    18961 tcggattcaa aaatattaca attattgcat tgttcttccc aattgttatc ttagcggttc
    19021 cattcattga tactttgttc gcaatgattc gacgtgtgaa aaaagggcag catataatgc
    19081 aagctgataa atcgcatttg catcataaac tattagcttt aggctacaca catagacaaa
    19141 cagtattatt aatctattca atctctattt tatttagtct ttcgagcatt attttgtatg
    19201 tatcgccacc attaggtgtt gtattaatgt ttgtattaat catatttagt attgaattaa
    19261 ttgttgaatt tacaggatta atagataaca actaccgacc aatattaaat ttaattagtc
    19321 gtaagtcatc tcataaagag gaatagggaa tgaaagcata gctgtatggg ataatttgta
    19381 ttatatggct ttactcttta caattttttt gtattaaatt tcaaatataa aaagcactgc
    19441 cataaacgtg tacttcaatt gtcgtttaat aatacgcaat tgatatttac cgtcttatga
    19501 tagtgctttt tatttttatt cagttggtat atcgaaaggt aactgctttg gagtttcttc
    19561 agtcaaatcg aaatttcctg cagtcatttg atttaaaaag ttaataaacg cttcatagtc
    19621 acttttaacg acatcgatat agtagcttac cttatcagtg taagtttggt ttcttaacat
    19681 aaaatgagtt gaagctaatt catattcaaa tttaccagtt tgatcataat tcagtgttac
    19741 tatacatggt actgcttctc gtagttcgac acgcccgata tcataaatga cgtctctaac
    19801 agcaccgcta taggcgcgaa ttaaaccgcc accacctaat ttaataccac caaaatatct
    19861 tgttactacg acacacgcat tatgaacatc gagctttttt aatatgtcta acattgggac
    19921 accggcagtt cctgtcggtt caccatcatc attcgctttt tgaatattca tttcaggtcc
    19981 aatagtatat gcagaacaat tatgagtggc atctttatgt tcttttttta ttgcagcaat
    20041 aaatgcttta gcttcatctt cattttgaac aggtttgata tgagcaatga atcttgattt
    20101 actaatcaca ttttcaataa tgtgttcttt tttaacagta atgatatttt gtgtcataat
    20161 aactccttaa ttcataagct taagattatt taatcttcat tatacactga aaatgacatg
    20221 actataaatc gtttgattgc cattttcttt ttaactgaaa tattgtatca ttgctatgag
    20281 tatattttag gaggacgact atgaaaattg ctgtgatgac cgattctaca agttatctgt
    20341 cgcaggactt aatcgataaa tataatattc aaatagcgcc attaagtgtg acttttgatg
    20401 atgggaagaa ctttacagaa agtaatgaaa tagcaattga agaattttat aataaaatgg
    20461 catcgtctca aacgattcca acaacaagcc aaccagcaat tggcgaatgg attactaaat
    20521 atgaaatgtt aagagatcaa ggttacacag atatcattgt catttgctta tcaagtggga
    20581 ttagtggaag ttatcaatct agttatcaag caggggaaat ggttgaaggt gttaatgtac
    20641 atgcatttga tagtaagctt gcagcaatga ttgaaggatg ttatgtatta cgtgctattg
    20701 aaatggttga agaaggatac gagccacagc aaattattga tgatttaact aatatgcgtg
    20761 aacacacagg tgcatattta attgttgatg acttaaagaa tttacaaaaa agtggtcgaa
    20821 ttactggtgc tcaagcatgg gttggaacat tattgaaaat gaagccagtt cttaagtttg
    20881 aagatggcaa gattatacca gaagaaaaag ttcgtactaa aaagcgtgcc attcaaacat
    20941 tagaaaagaa agtattagat attgtaaaag actttgaaga agtaacttta tttgtcataa
    21001 atggagatca tttcgaagat ggtcaagcgt tatacaaaaa gttacaagat gattgtcctt
    21061 cagcttatca agtagcatac tctgagtttg gtccagttgt tgcagcacat ttaggttctg
    21121 gtggattagg tttaggctat gttggcagaa aaataagatt aacataatta taaaatttta
    21181 ataaaagagt ctatattgta attggaaatt atctctcgta tacatggctt taaatgttca
    21241 tcatttgaaa gccaaaatgc taaagatata agaaaatcat tataatatta ggctcttttt
    21301 tacgttgaaa tgaggtttta agcattaaac attacgggaa attaattcat cctcatactt
    21361 cacttactaa tgaaaaaatt aaaaaagaag taacaggtgt catcaaacaa aattcaaact
    21421 attattgtgt tcaatgtgaa agtacaaatc caaagcattt ttatcagtat gattcctcag
    21481 tacattccaa gaaaattgta tattgcagaa attgtatatc actgggtcga atggataatg
    21541 taacaagata taaaataaca gagagttcgc aaagttcatc acaagcatat tatcatctct
    21601 catttgaatt gtcggaacag cagtcttatg cctcagaaca tattgttcga gccattagaa
    21661 agagacaaac gattttgtta tatgccgtaa caggtgcagg taagacagaa atgatgtttc
    21721 aaggcattca atatgcaaga atacagggag ataatatagc tattgtgtca ccacgtgtag
    21781 atgttgttgt agaaattagt aaacgtatta aagacgcatt tcttaatgaa gatatagaca
    21841 tactacacca gcaatcaaga caacaatttg aagggcattt tgttgtatgc acagtgcatc
    21901 aactttaccg attcaaacag cactttgata ctatttttat tgatgaagtc gatgcctttc
    21961 ctttatcaat ggataaaaat ttacaacaag cattgaagtc atcttctaaa gttgaacatg
    22021 caacaattta tatgacagca acaccaccga aacaacttct gtcagagatt ccccacgaaa
    22081 atataattaa attgccagct cgctttcata aaaaatcact tccagttcct aaatatcgtt
    22141 atttcaaact taataataag aagattcaga aaatgttata ccgaatttta caagatcaaa
    22201 ttaataatca acgttataca ctggtgtttt ttaacaatat agaaacaatg attaaaacat
    22261 tttcggttta taagcagaaa attactaaat taacatacgt ccatagcgag gatgtttttc
    22321 gctttgaaaa agttgaacaa ttaaggaatg gacatttcga tgtcattttt actacgacaa
    22381 tattagaacg tggatttaca atggcaaatt tggatgttgt tgttatcgat gcacatcaat
    22441 atactcaaga ggctttaata caaattgctg gacgtgttgg acgaaaatta gaatgtccta
    22501 ctggaaaagt attgtttttt catgaagggg taagtatgaa tatgattcaa gctaaaaaag
    22561 agattcaaag gatgaacaaa ttagcattaa aaagaggttg gattgatgaa taattgtttg
    22621 agttgtggtg ctaagttata tgaaaatata accatttata atttgttcaa gaaacctaat
    22681 agattatgtg acagatgcaa agagaattgg gacaatatta aacttgatat taaagcaagg
    22741 cgatgttcaa ggtgcttaaa acacttaaat caagatgaag cgtattgttt agactgcaag
    22801 tttctatcgg cacactttaa tttaatggaa caattatatt gtcaatttca atatgacggt
    22861 ttaatgaaag agatgataca tcagtataaa tttttgaaag actattattt atgtgaatta
    22921 ttggcacatt tgattgaaat accacaaaca tcttatgact atattgtgcc aattccttct
    22981 tcgccggcac atgatttatc tagaacattt aacccggtag aagcagtact aaaagctaaa
    23041 gggattcgct ttgataagat tttaaagatg tcaaatagac caaaacagtc tcatttaact
    23101 aagaaagagc gtctggcaga tgaaaatcca tttattattg atacggaatt agatttaaat
    23161 ggtaaggaaa tattactcgt tgacgatatt tatacaactg gattaacaat tcatcgtgca
    23221 gggtgtaaat tatatgctaa aaatatcaga aaattcaaag tgtttgcgtt tgcacgatag
    23281 cgtaaaaatg ttaaaatata ataaagagtt accaataaag aggtttaagg agagattact
    23341 atgattagat ttgaaattca tggagataac ctcactatca cagatgctat tcgcaactat
    23401 attgaggaaa aaattggtaa gttggaacgt tattttaatg acgtaccaaa tgcagtggcg
    23461 catgttaaag ttaaaactta ttcaaattca gctactaaaa ttgaagtaac aattccattg
    23521 aaaaatgtta cgttaagagc tgaagagcga aacgatgatt tatacgcagg tattgattta
    23581 attaataata aacttgaaag acaagttcga aaatataaaa cacgtattaa tcgtaagagc
    23641 cgtgatcgag gagatcaaga agtgtttgtt gccgaattac aagaaatgca agaaacacaa
    23701 gttgataatg acgcttacga tgataacgag atagaaatta ttcgttcaaa agaattcagc
    23761 ttaaaaccaa tggattcaga agaagcggta ttacaaatga atctattagg tcatgacttc
    23821 tttgtattca cagacagaga aactgatgga acaagtatcg tttaccgccg taaagacggt
    23881 aaatatggct tgattcaaac tagtgaacaa taaattaagt ttaaagcact tgtgtttttg
    23941 cacaagtgct tttttatact ccaaaagcaa attatgacta tttcatagtt cgataatgta
    24001 atttgttgaa tgaaacatag tgactatgct aatgttaatg gatgtatata tttgaatgtt
    24061 aagttaataa tagtatgtca gtctattgta tagtccgagt cgaaaatcgt aaaatattta
    24121 taatataatt tattaggaag tataattgcg tattgagaat atatttatta gtgataaact
    24181 tgttgacaac agaatgtgaa tgaagtatgt cataaatata tttatattga ttctacaaat
    24241 gagtaaataa gtataatttt ctaactataa atgataagat atattgttgt aggccaaaca
    24301 gttttttagc taaaggagcg aacgaaatgg gatttttatc aaaaattctt gatggcaata
    24361 ataaagaaat taaacagtta ggtaaacttg ctgataaagt aatcgcttta gaagaaaaaa
    24421 cggcaatttt aactgatgaa gaaattcgta ataaaacgaa acaattccaa acagaattag
    24481 ctgacattga taatgtcaaa aagcaaaatg attatttaga taaaatttta ccagaagcat
    24541 atgcacttgt tagagaaggc tctaaacgtg tattcaatat gacaccatat aaagttcaaa
    24601 ttatgggtgg tattgcaatt cataaaggtg atatcgctga gatgagaaca ggtgaaggta
    24661 aaacattaac agcgacaatg ccaacatact taaatgcatt agctggtaga ggtgttcacg
    24721 ttattacagt caatgaatac ttatcaagtg ttcaaagtga agaaatggct gagttatata
    24781 acttcttagg tttgactgtc ggattaaact taaacagtaa gacgacagaa gaaaaacgtg
    24841 aagcatacgc acaagacatt acttacagta ctaataatga gctaggtttt gattacttac
    24901 gagataacat ggtgaattat tctgaagata gagtaatgcg tccattacat tttgcaatca
    24961 ttgatgaggt tgactcaatt ttaatcgacg aggcacgtac gccattaatt atttctggtg
    25021 aagctgaaaa gtcaacgtca ctttatacac aagcaaatgt ttttgcgaaa atgttaaaac
    25081 aggacgaaga ttataaatac gatgaaaaaa cgaaagctgt acatttaaca gaacaaggtg
    25141 cggataaagc tgaacgtatg ttcaaagttg aaaacttata tgatgtacaa aatgttgatg
    25201 ttattagtca tatcaacaca gctttacgtg cgcacgttac attacaacgt gacgtagact
    25261 atatggttgt tgatggcgaa gtattaattg tcgatcaatt tacaggacgt acaatgccag
    25321 gccgtcgttt ctcggaaggt ttacaccaag ctattgaagc gaaggaaggc gttcaaattc
    25381 aaaatgaatc taaaactatg gcgtctatta cattccaaaa ctatttcaga atgtacaata
    25441 aacttgcggg tatgacaggt acagctaaaa ctgaagaaga agaatttaga aatatttata
    25501 acatgacagt aactcaaatt ccgacaaata aacctgtgca acgtaacgat aagtctgatt
    25561 taatttacat tagccaaaaa ggtaaatttg atgcagtagt agaagatgtt gttgaaaaac
    25621 acaaggcagg gcaaccagtg ctattaggta ctgttgcagt tgagacttct gaatatattt
    25681 caaatttact taaaaaacgt ggtatccgtc atgatgtgtt aaatgcgaaa aatcatgaac
    25741 gtgaagctga aattgttgca ggcgctggac aaaaaggtgc cgttactatt gccactaaca
    25801 tggctggtcg tggtacagat atcaaattag gtgaaggcgt agaggaatta ggcggtttag
    25861 cagtaatagg tacagagcga catgaatctc gtcgtattga tgaccagtta cgtggtcgtt
    25921 ctggacgtca aggtgataaa ggggatagtc gcttctattt atcattacaa gatgaattaa
    25981 tgattcgttt tggttctgaa cgtttacaga aaatgatgag ccgactaggt ttagatgact
    26041 ctacaccaat tgaatcaaaa atggtatcaa gagctgtaga atcagcacaa aaacgtgtag
    26101 aaggtaataa cttcgacgcg cgtaaacgta tcttagaata cgatgaagta ttacgtaaac
    26161 aacgtgaaat tatctataac gaaagaaata gtattattga tgaagaagac agctctcaag
    26221 ttgtagatgc aatgctacgt tcaacgttac aacgtagtat caattactat attaatacag
    26281 cagatgacga gcctgaatat caaccattca tcgactacat taatgacatc ttcttacaag
    26341 aaggtgacat tacagaggat gatatcaaag gtaaagatgc tgaagatatt ttcgaagtcg
    26401 tttgggctaa gattgaagca gcatatcaaa gtcaaaaaga tatcttagaa gaacaaatga
    26461 atgagtttga gcgtatgatt ttacttcgtt ctattgatag ccattggact gatcatatcg
    26521 acacaatgga tcaattacgt caaggtattc acttacgttc ttatgcacaa caaaatccat
    26581 tacgtgacta tcaaaatgaa ggtcatgaat tatttgatat catgatgcaa aatattgaag
    26641 aagatacttg taaattcatt ttaaaatctg tagtacaagt tgaagataat attgaacgtg
    26701 aaaaaacaac agagtttggt gaagcgaagc acgtttcagc tgaagatggt aaagaaaaag
    26761 tgaaaccgaa accaatcgtt aaaggcgatc aagttggtcg taacgatgat tgtccatgtg
    26821 gtagtggtaa aaaattcaaa aattgccatg gaaaataaat gatataaaat aactccttcc
    26881 aattaaacac ctatagtttg tgttatggga ggagtctttt tattttacaa gcgttaaata
    26941 ctttaaaaaa tgtgaagaag ttgttaaacg ttgttatgta cttagtttta aaaaatcggt
    27001 ttaggcatat gtcgatgata aatgtactga tttttaacaa taaatgcata aactaattgt
    27061 cagtgtgctt atatttctta acattgttat ttaacaaaat tatgttaaaa tttagcatta
    27121 taaaagatgc aaatcaatga cttgaattga aatataaata ggagcgaatg ctatggaatt
    27181 atcagaaatc aaacgaaata tagataagta taatcaagat ttaacacaaa ttagggggtc
    27241 tctttgactt agagaacaaa gaaactaata ttcaagaata tgaagaaatg atggcagaac
    27301 ctaatttttg ggataaccaa acgaaagcgc aagatattat agataaaaat aatgcgttaa
    27361 aagcaatagt taatggttat aaaacactac aagcagaagt agatgacatg gatgctactt
    27421 gggatttatt acaagaagaa tttgatgaag aaatgaaaga agacttagag caagaggtca
    27481 ttaattttaa ggctaaagtg gatgaatacg aattgcaatt attattagat gggcctcacg
    27541 atgccaataa cgcaattcta gagttacatc ctggtgcagg tggcacggag tctcaagatt
    27601 gggctaatat gctatttaga atgtatcaac gttattgtga gaagaaaggc tttaaagttg
    27661 aaactgttga ttatctacct ggggatgaag cggggattaa aagtgtaaca ttgctcatca
    27721 aagggcataa tgcttatggt tatttaaaag ctgaaaaagg tgtacaccga ctagtacgaa
    27781 tttctccatt tgattcatca ggacgtcgtc atacatcatt tgcatcatgc gacgttattc
    27841 cagattttaa taatgatgaa atagagattg aaatcaatcc ggatgatatt acagttgata
    27901 cattcagagc ttctggtgca ggtggtcagc atattaacaa aactgaatcg gcaatacgaa
    27961 ttacccacca cccctcaggt atagttgtta ataaccaaaa tgaacgttct caaattaaaa
    28021 accgtgaagc agctatgaaa atgttaaagt ctaaattata tcaattaaaa ttggaagagc
    28081 aggcacgtga aatggctgaa attcgtggcg aacaaaaaga aatcggctgg ggaagccaaa
    28141 ttagatcata tgttttccat ccatactcaa tggtgaaaga tcatcgtacg aacgaagaaa
    28201 caggtaaggt tgatgcagtg atggatggag acattggacc atttatcgaa tcatatttaa
    28261 gacagacaat gtcgcacgat taatatatat tttaaaaccg aggctctaaa agggcgtcgg
    28321 tttttggttt ttttaaaggt agctaaataa attgtaaatt agattttgga atatgatttg
    28381 tttatgaata tttaagtaca attcggtaga tagagttaga atatattttt taaaagttgt
    28441 gtttgttaaa acaacatatg cagtttgcat ttagtaatat tacctatggc gattttcaag
    28501 gtattgaatt aattattgaa aacgttctca attacatggt atgaatacat tttacactat
    28561 gataaaaggt tgtattcttt ttatattgtt aaccatttga ttacatcgtt ataacaatag
    28621 cttttgacaa aatgtattgt gctatagtat ttgcatactt aaaatactaa cagcaaagga
    28681 atgacagcaa gatgaaaaaa tctcttacag tgacggtttc gtcagtgtta gcttttttag
    28741 ctttaaataa tgcagcacat gcacaacaac atggcacaca agtaaaaaca cctgttcaac
    28801 ataattatgt atcaaatgtt caagcacaaa cgcaatcacc gacaacttat acagtagttg
    28861 ctggcgattc attatataag attgctttag agcatcactt aacgttgaat caattatatt
    28921 catacaatcc tggtgtaaca cctttaattt ttcctggtga cgtgatttca cttgtgcctc
    28981 aaaataaagt gaaacaaact aaagcggtta aatcaccagt aagaaaagca agccaagcta
    29041 aaaaggtagt aaaacaacct gtacaacaag catctaaaaa agtagtagtt aagcaagcac
    29101 ctaagcaagc agtaactaag acagttaatg tagcatacaa acctgctcaa gtacaaaaat
    29161 cagtaccaac tgtacctgtt gcacataact acaataaatc agttgctaac agaggaaact
    29221 tatatgctta tggaaactgc acatattatg ctttcgatcg tcgtgcacaa ttaggtagaa
    29281 gtataggaag tttatggggc aatgcaaata actggaatta cgcagcaaaa gttgcaggat
    29341 ttaaagtaga taaaacacca gaagttggcg ctattttcca aacagctgct ggtccatatg
    29401 gacatgttgg tgttgttgaa tctgtaaacc ctaatggaac aattactgtt tctgaaatga
    29461 actatgctgg atttaatgtt aaatcttcaa gaacaatttt aaatccagga aaatataatt
    29521 acatccacta agtaatatat caagacaaga ctatcctctt agcctgttta agtaacaggt
    29581 tgagaggatt ttttggtatc atttaatcag agttatataa agaagatatt taaatgatat
    29641 ttaattgatt gatatgtaaa aagaaagtat aatttatgat taattaatgg aggaggtaat
    29701 tgaaatgggt gtacatcaat attttaaaag attatcagat atggaaagac ttataagatt
    29761 acctggaaaa tttaaatatt ttgaacacaa tgttgcagca cactccttta aagtaactaa
    29821 aattgcacaa tatctagcaa cagttgaaga atatcatgga cgaaagatta attggaaaag
    29881 cttatatgaa aaagcattaa atcatgattt cgccgaagtg tttactggtg atataaaaac
    29941 acctgttaaa tatgcgagta gtgaattaaa aaaattattt tcgcaagttg aagaagaaat
    30001 ggtagagacc tttattgaag aagaaattcc attacaatat agagatgttt ataagcaacg
    30061 actgcaagaa ggtaaagatg attcattaga aggccaaata ctttcagttg ctgataaaat
    30121 tgatttgctt tatgaaacat ttggagaaat acaaaaacgt aatcccgaag aattattttt
    30181 cgaaatttat gaaatgagtc tagaaacaat tattcaattt gaccatttag catctgtaca
    30241 agattttatt aataatatca ttccagaaat gttgactgaa aactttatac ctagaacaga
    30301 attaagagaa acaaccatga acattttaaa taaaagaaaa gaggaaaatg aatgatatgg
    30361 tattttagcg cagcattctt tccatgtgtc ttggtagtat tatttagtgt aataacaaga
    30421 agtaaatggg tcggtactat tctgacatta attttaattg gtgcctcaat ctataaagag
    30481 tatttccata acgagtggat tatttttatt gatgtagtgt cattattagc tggttattta
    30541 attatagatc aactcgaatt tcataaacat caagatgaag atcgctaaga ttaactttaa
    30601 aataatgttt caaacaaatt tgttgaaaca aaatgatgat taatataatg tgtatttaca
    30661 tactaaaaat aacaagataa acgatttgat ttaaggcaag catagttagc acaactatgt
    30721 ttgtttttct ttgttcgaca tttttacgaa caaacgtttg ctttttgtgt gactactttg
    30781 ctaaaatatg taatgagaaa gcaaagagtt gagcggaaat ataaataata cgttgaaaga
    30841 ggaggcatat gtgacaatgg ttgaacatta tccttttaaa atacattctg attttgagcc
    30901 tcaaggtgac caaccgcaag caattaaaga aatcgtggaa ggtattaaag cggggaaaag
    30961 acatcaaact ttattaggtg ctactggcac agggaaaaca tttacgatga gtaatgttat
    31021 taaagaagtt gggaaaccaa cgttaattat cgcgcataac aaaacattag caggacaatt
    31081 atatagtgag tttaaagaat tttttcctga aaacagggtg gaatactttg taagttacta
    31141 tgattattat caaccagagg catacgtacc gtctactgac acttttattg aaaaagatgc
    31201 ctcaatcaat gatgaaattg atcaactacg acattctgct acaagtgcat tatttgaacg
    31261 cgatgatgta attattattg ctagtgtaag ttgtatatat ggtttaggta atcctgaaga
    31321 atataaagat ttagtagtaa gtgttcgagt tggtatggaa atggatagaa gtgaattact
    31381 tagaaaactt gtagatgtgc aatatacacg aaatgacatc gatttccaac gaggaacgtt
    31441 tcgagtgcgt ggtgatgtag tggaaatatt cccagcctct aaagaagaac tttgtataag
    31501 ggttgagttt ttcggcgatg agattgaccg tatccgagaa gttaactacc taacaggtga
    31561 agtgttgaaa gaaagagaac attttgcgat attcccagct tctcacttcg taacacgtga
    31621 agaaaagttg aaagttgcga ttgaacgtat tgaaaaagaa ttggaagaac gattgaaaga
    31681 attacgagat gagaataaat tactagaagc gcaaaggtta gaacagcgta ccaactatga
    31741 tttagaaatg atgcgagaga tgggattctg ttcaggaatt gaaaactatt ccgtacattt
    31801 aactttgcga ccactgggtt cgacaccata tactttattg gattactttg gcgatgattg
    31861 gttagtaatg attgatgaat cacatgtgac attaccgcaa gttcgaggca tgtataacgg
    31921 agacagagcg cgtaaacaag ttttggtgga tcatgggttt agattaccga gtgcattaga
    31981 taaccgtcca cttaaatttg aagaatttga agaaaagaca aaacaacttg tgtatgtatc
    32041 tgcaacgcct ggaccatacg aaattgaaca tacggataag atggttgaac aaattattcg
    32101 tcctactggt ttactggatc ctaagattga ggttagacct actgaaaatc aaattgacga
    32161 tttattaagt gaaattcaaa caagagttga gcgtaatgaa cgcgtacttg ttacaacgct
    32221 cactaaaaag atgagtgaag atttaaccac atacatgaaa gaagcgggta ttaaagttaa
    32281 ttatctgcat tcagaaatca agacattaga acgaattgaa ataattagag acttacgaat
    32341 gggtacatat gatgttatcg taggtattaa tttattaaga gagggtattg atataccaga
    32401 agtttctcta gttgtcatat tagatgcaga taaagaaggg tttttacgtt ctaaccgctc
    32461 attaattcaa acaataggta gagctgcgcg taacgataaa ggtgaagtca ttatgtatgc
    32521 cgataaaatg actgattcga tgaagtatgc aattgatgag acacaacgtc gtcgagaaat
    32581 acagatgaaa cataatgaaa aacatggtat tacacctaaa acaattaata aaaaaataca
    32641 tgatttaatt agtgctactg ttgaaaatga cgaaaataat gacaaagcac aaactgtgat
    32701 acctaagaag atgacgaaaa aagaacgtca aaagacaatc gacaatatag aaaaagaaat
    32761 gaaacaagca gcgaaagatt tagatttcga gaaagctaca gaattaagag atatgttatt
    32821 tgaattaaaa gcagaagggt gacaagtaaa tgaaagaacc atccatagta gtaaaaggtg
    32881 ctcgtgcgca taacttgaaa gatattgata tcgaactacc taaaaataaa ttaattgtta
    32941 tgacaggttt atctgggtca ggtaaatcgt cattagcatt cgatactata tatgctgaag
    33001 gacaacgacg ttatgttgaa tcattaagtg cctatgcgcg tcaattttta ggccaaatgg
    33061 acaaaccaga tgttgataca attgaaggat tatcgccagc aatttcaata gatcaaaaaa
    33121 caacaagtaa aaatccaaga tcaactgtag caacagtaac agaaatatat gattatatac
    33181 gtttgttata tgcacgtgtt ggtaaacctt actgtccaaa tcacaatata gaaattgaat
    33241 cgcaaacagt acaacaaatg gttgaccgca ttatggaatt agaggcacgt acaaagattc
    33301 aattattagc acctgtcatc gctcatcgta aaggtagtca tgaaaagcta atcgaagata
    33361 ttggtaaaaa aggttatgta cgtttaagaa tcgatggcga aattgttgat gtaaatgatg
    33421 tacctacttt agataagaac aagaatcata caatagaagt tgttgtagac cgattagttg
    33481 ttaaagatgg aattgaaaca cgactagctg actctataga aactgcctta gagctttcag
    33541 aaggacaatt aacagtcgat gtcattgacg gggaagacct taagttttca gaaagccatg
    33601 cttgtcctat atgtggattt tcaatcggag agttagaacc aagaatgttt agctttaaca
    33661 gtccttttgg tgcttgtccg acatgtgatg gcttaggcca aaagttaaca gtcgatgtag
    33721 acttggttgt tcccgacaaa gataagacgc taaacgaagg tgcaatagaa ccttggatac
    33781 cgacgagttc tgatttttat ccaacattgt taaaacgtgt ttgtgaagtt tataaaatca
    33841 atatggataa accttttaaa aagttaacag aacgtcaacg tgatatttta ttgtatggtt
    33901 ctggtgacaa agaaattgaa tttacattta cacaacgtca aggtggtact agaaaacgaa
    33961 caatggtttt cgagggtgta gttcctaata taagtagacg attccatgaa tctccttcag
    34021 aatatacacg tgaaatgatg agtaaatata tgactgaact accttgcgaa acttgtcatg
    34081 gaaagcgatt gagtcgtgaa gcgttatctg tttatgtagg tggtttaaat attggtgaag
    34141 tagtcgaata ttcaatcagt caagcgctga actattataa aaacattgat ttgtcagaac
    34201 aagatcaagc gattgcaaat caaatattga aagaaattat ttcccgactc acttttttaa
    34261 ataatgtggg acttgaatat ttaacgttaa acagagcttc aggtacactt tcaggtggtg
    34321 aagcacaacg tattcgatta gcaacgcaaa ttgggtcgcg tttgactggt gtcttatatg
    34381 tattagatga gccatcaatt ggactgcatc aaagagataa tgatcgatta attaatacac
    34441 ttaaagaaat gagagattta ggaaatactt taattgtagt tgaacacgat gatgatacaa
    34501 tgcgtgcggc tgattactta gtggatatag gtcctggtgc tggtgaacat ggagggcaga
    34561 ttgtgtctag tggtactcct caaaaggtaa tgaaagataa aaaatcatta acaggacaat
    34621 acttgagtgg taagaaacgt attgaagtac ctgaatatcg cagaccggct tcagatcgta
    34681 aaatttctat acgtggagct agaagcaaca atcttaaagg ggttgatgtg gacataccac
    34741 tatcaatcat gacggttgtt acaggtgtat caggttctgg taaaagctca ttagtaaatg
    34801 aagtattata caaatcatta gctcaaaaaa ttaataaatc taaagtaaag ccaggattgt
    34861 acgataagat tgaaggtatt gatcaacttg ataaaattat tgatattgat caatcaccaa
    34921 taggtagaac gccacgctct aatccagcaa catatactgg tgtgtttgat gatatacgtg
    34981 atgtgtttgc gcaaacaaat gaagctaaaa ttcgaggata tcaaaaaggg cgttttagtt
    35041 ttaatgtaaa aggtggacgc tgtgaagctt gtaaaggtga cggtattatt aaaattgaaa
    35101 tgcatttttt acctgatgtt tatgttcctt gtgaagtgtg tgatggtaaa cgatataatc
    35161 gtgagacact agaggttact tacaaaggta aaaatattgc tgacatttta gaaatgactg
    35221 ttgaagaagc aacacaattt tttgaaaata ttcctaagat taagcgcaag ttacaaacac
    35281 tagttgatgt tggtcttgga tacgtcacat taggtcaaca agctacaacg ttatcaggtg
    35341 gtgaggctca acgtgtgaaa cttgcatctg aacttcataa acgttcaact ggtaaatcta
    35401 tttatatcct agatgaaccg acaacagggt tacatgttga cgatattagt agattattaa
    35461 aagtattaaa ccgattagtt gaaaatggtg atactgttgt aattattgaa cataacctag
    35521 atgttatcaa aacagcagac tatattatag acttaggtcc tgaaggtggt agtggcggtg
    35581 gtactattgt tgcgactggc acacccgaag atattgctca gacaaagtca tcatatacag
    35641 gaaagtattt aaaagaagta cttgaacgag ataaacaaaa tactgaagat aaataagatt
    35701 aaaagaagtg aaggatgtta taaatttatc cttcgcttct ttttattaat ttagtaatga
    35761 atagtagaaa gaaaagatgc gtaaaaagaa ttatgttaag atagggtcaa tctagagtag
    35821 ttaaacataa atcgaactgg gagtgggaca gaaatgataa agaatcacta atgatttatt
    35881 atgtagtggt tctttgtcat tagccacagc tattgtgtac ttaaaaatag gaatgcatga
    35941 gtgcaactca tgcataagaa atactaattt ctaaagaaaa agtatttctt tatgttgggg
    36001 ccccgccaac ttgcattgtt tgtagaattt cttttcgaaa ttctttatgt tggggccccg
    36061 ccaactaatt ccaatatatc attgtagagc ttaggtcatt gatttttggc tcggactttt
    36121 atggcgatat gaaccatgta aattaagcaa gcaataaatt aatgattgat attgacttgt
    36181 aaaataataa caataatgaa caattaatat ttattttagc ttttcaatgt agattggtgt
    36241 tatatttttg atatgataag aagagatgta agagtaggga taaatacaat tgaggtgaac
    36301 ccatgttaac gacagaaaaa ctagttgaaa cattaaagtt agatttaatc gctggtgaag
    36361 aaggactatc gaagccaatt aaaaatgctg atatatcaag accgggctta gagatggcag
    36421 gttatttttc acattatgcg tcagatagaa tacaactatt aggaacaacg gaactatcgt
    36481 tttacaattt attaccagat aaggatcgcg caggtcgtat gcgtaaacta tgcagaccag
    36541 aaacgcctgc aattattgtg acacgtggat tgcagccacc agaagaatta gttgaagctg
    36601 caaaagaatt aaatacccca cttatagttg ctaaagatgc gactacaagt ttaatgagtc
    36661 gcttaacaac gtttttagag catgcacttg caaagacgac atctttacat ggtgttttag
    36721 tagatgttta cggtgttggt gtactaatta ccggtgattc aggaataggt aaaagtgaga
    36781 ctgcgttgga attagttaaa cgtgggcata gattagtagc agatgataat gtagaaatac
    36841 gtcaaattaa taaagatgaa ctaataggga aaccaccaaa gttaatagaa catctattag
    36901 aaatacgtgg actaggtatt atcaatgtta tgactttatt tggcgcgggt tcaatattaa
    36961 ctgaaaaacg aattagatta aatattaatt tggaaaactg gaacaagcaa aagttatatg
    37021 accgcgtagg tcttaatgaa gagacgctaa gtattttaga tactgaaatc actaaaaaaa
    37081 caatacctgt aagacctggt agaaatgttg cggtaattat tgaggtcgct gcaatgaact
    37141 atcgattaaa tatcatgggc attaacacgg ccgaagaatt tagtgaaaga ttaaatgaag
    37201 aaattatcaa gaacagtcat aagagtgagg agtaggttga atgggtattg tatttaacta
    37261 tatagatcct gtggcattta acttaggacc actgagtgta cgatggtatg gaattatcat
    37321 tgctgtcgga atattacttg gttactttgt tgcacaacgt gcactagtta aagcaggatt
    37381 acataaagat actttagtag atattatttt ttatagtgca ctatttggat ttatcgcggc
    37441 acgaatctat tttgtgattt tccaatggcc atattacgcg gaaaatccaa gtgaaattat
    37501 taaaatatgg catggtggaa tagcaataca tggtggttta ataggtggct ttattgctgg
    37561 tgttattgta tgtaaagtga aaaatttaaa cccatttcaa attggtgata tcgttgcgcc
    37621 aagtataatt ttagcgcaag gaattggacg ctggggtaac tttatgaatc acgaggcaca
    37681 tggtggatcg gtgtcacgcg cttttttaga acaattacat ttgcctaatt ttataataga
    37741 aaatatgtat attaacggcc aatattatca tccaacattc ttatatgaat ccatttggga
    37801 tgtcgctgga tttattatct tagttaatat tcgtaaacat ttaaaattag gagaaacatt
    37861 ctttttatat ttaacttggt attcaattgg tcgattcttt atagaaggat tacgtacaga
    37921 tagcttaatg ctcacaagta atattagagt tgcacaatta gtatcaattc ttttaatttt
    37981 aataagtata agtttaattg tatatagaag gattaagtat aatccaccgt tgtatagcaa
    38041 agttggggcg cttccatggc caacaaaaaa agtgaagtag tgatagtttg aggaaatttt
    38101 tatcaaaaac acatcatcat acaaaccctt tatggcgtgt ataccgtctt gttaaatttt
    38161 cgaaagtttt taagaatgta attatcattg aattttcgaa atttattcca agtatggtac
    38221 tgaaaagaca tatatataaa caacttttaa atattaatat cggtaatcaa tcgtcgatag
    38281 cttataaagt aatgttagat attttttacc cagaactgat tacgattggt agtaacagtg
    38341 ttattggtta caatgtaaca attttgacgc atgaagcatt agttgatgaa tttcgttatg
    38401 gaccagtgac gataggatct aacactttga ttggtgcaaa tgctaccatt ttacccggta
    38461 taacgattgg tgacaatgta aaagttgcag ctggtacggt tgtttcaaaa gatataccgg
    38521 ataatggatt tgcatatggc aaccctatgt atataaaaat gattaggagg tgacaatttt
    38581 atggcgcaaa agaataataa tgtaattcca atgacttttg atgatgcatt ttatcgtaaa
    38641 atggctaaac agaagtttaa acaaagagaa tataaacgag ctgctgaata ctttgaaaaa
    38701 gtgttagaat tgtcacctga tgatctggaa attcaaattg attatgcaca atgtctagtg
    38761 caacttggta ttgctaaaaa agcagaacat ttattttatg acaatattat ttataatagg
    38821 catctagaag atagctttta tgaattgagt cagctcaaca ttgaagttaa cgaaccaaac
    38881 aaggcattct tgtttggtat taattatgtt attgttagcg acgaccaaga ttatagagat
    38941 gaattagatc aaatgtttga tgtgaaatat caaagtgaag aacaaattga acttgaagct
    39001 caattgtttg tagttcaaat actattccaa tatctttttt ctcaaggtcg attaaaagat
    39061 gcaaagaatt atgtcttaca tcaaccacaa gaagttcaag atcatcgtgt agtacgtaat
    39121 ttattggcaa tgtgttattt atatctcggt gaatatgata cggctaaagc attgtacgaa
    39181 gcactattac aagaggatag tacagatata tatgcattat gccattatac tttgctactt
    39241 tataacacta aggaaaatga acaatatcaa aaatatttaa aaatattaaa caaagttgta
    39301 cctatgaatg acgatgaaag ttttaaatta ggtattgtat taagttattt aaagcagtat
    39361 cgtgcatcac aacaattgtt gtacccttta tataaaaaag ggaaattttt atcaattcaa
    39421 atgtacaatg ctttagcata taattattat tatttaggtg aagaagacga aagtcattac
    39481 tactgggata aattgaagca aatttctaaa gtggaaattg gacatgcgcc ttgggtaatt
    39541 gaaaatagca aagaagtttt tgaccaacat attttgccat tacttcaaag tgatgacagt
    39601 cattatcgtt tatatggtat ttttttattg gatcaattaa atggtaaaga aattgtgatg
    39661 acggaaagta tttggcaggt tttggaaaat ctaaataatt atgagaaatt gtatttaacg
    39721 tatttagttc aaggtttaac gctcaataaa ttagacttca ttcatcgcgg cttattaacg
    39781 ctttaccata atgaattatt tgtaagtgaa aatgatgtaa tggttgcatg gattaatcaa
    39841 ggtgaactca taattgctga aaaagtagat ttaactgatg ttgagccata tatcggtgcg
    39901 tttatttatt tgtattttaa aaatcaacct cgaaacgtta caaagaagca aattacaaca
    39961 tggttaggca taacacaata taaactgaac aaaatgattg aatttctctt gagcatatag
    40021 a
//
LOCUS       DALPQQ010000011        38195 bp    DNA     linear   BCT 22-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus strain K18-6-464
            SAMD00233528-rid16434743.denovo.011, whole genome shotgun sequence.
ACCESSION   DALPQQ010000011 DALPQQ010000000
VERSION     DALPQQ010000011.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMD00233528
            Sequence Read Archive: DRR236061
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 38195)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 38195)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001543423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001543423.1
            Genome Coverage       :: 77x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/22/2022 17:09:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,811
            CDSs (total)                      :: 2,743
            Genes (coding)                    :: 2,689
            CDSs (with protein)               :: 2,689
            Genes (RNA)                       :: 68
            rRNAs                             :: 2, 4, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 4, 2 (16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 54
            CDSs (without protein)            :: 54
            Pseudo Genes (ambiguous residues) :: 0 of 54
            Pseudo Genes (frameshifted)       :: 27 of 54
            Pseudo Genes (incomplete)         :: 27 of 54
            Pseudo Genes (internal stop)      :: 10 of 54
            Pseudo Genes (multiple problems)  :: 10 of 54
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..38195
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMD00233528-rid16434743.denovo.011"
                     /strain="K18-6-464"
                     /db_xref="taxon:1280"
                     /geo_loc_name="Japan: Niigata"
     gene            127..606
                     /locus_tag="O7798_000460"
     CDS             127..606
                     /locus_tag="O7798_000460"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498745.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YagU family protein"
                     /protein_id="HDC2862736.1"
                     /translation="MGIFIYAGIIGGLLSGIVKLGWEVMFPPRTPERNATNPPQELLQ
                     QLGFSSEFTHQTYTFSNMELPWVSFIVHFSFSIVIAIIYCILVKKYAYLAMGQGAVFG
                     IAIWVLFHLIIMPIMHTVPAVWDQPFQEHLSEFFGHIVWMMTIELVRQHFVYRYKLN"
     gene            complement(934..1578)
                     /locus_tag="O7798_000461"
     CDS             complement(934..1578)
                     /locus_tag="O7798_000461"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498744.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4'-phosphopantetheinyl transferase superfamily
                     protein"
                     /protein_id="HDC2862737.1"
                     /translation="MTVFVMQLQSNLKSIEELISQSRWSYKKPRTVNYRYNQDKLMHR
                     LGDILVQYGIQHDTGLLPHEWHYHISPRGKADIVQHNRDGQPIYVSLSYSYPYIVCVV
                     DKEPVGIDIEKISQRLDWRTLVTCFSTNEAHQICSLNDFYQIWTQKESFTKLIGEGLI
                     KGLDIYDMTQSHFYQSREVKFKQFIFDQFMVQVCFLGQAPWGYKKVSVFQLLSS"
     gene            complement(1591..8766)
                     /locus_tag="O7798_000462"
     CDS             complement(1591..8766)
                     /locus_tag="O7798_000462"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498743.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid adenylation domain-containing
                     protein"
                     /protein_id="HDC2862738.1"
                     /translation="MIMGNLRFQQEYFRIYKNNTESTTHRNAYWVKLAKNVEATKMMY
                     ALSTIVQQHASIRHFFDVTTDDNLTMILHEFLPFIEIKQVPSSSANYDLEAFFKQELS
                     TYHFNDSPLFKVKLFQFADAAYILLDFHVSIFDDSQIDIFLDDLCNAYRGNTVINNTR
                     QHAHINRNDDKDNQDASHIALDSNYFRLENNSDIHIDSYFPIKHPFEQALYQTYLIDD
                     MTSIDMASLAVSVYLANHIMSQQHDVTLGIHVPSHLPNDLHGNIVPLTLTIDAKDVCQ
                     RFTTDFNKCVLQNMSQLQCAKSSLSLETIFHCYHHMMSCCNDVIEDVHQIHDAHTSLA
                     DIEIFPHQHGFKIIYNSAAYDLLSIETLSDLVRNIYLQITEENGNKRTTVDELNLMTE
                     RDIQLYDDINLSLPEIDDAQTVVTLFEQQVEATPNHVAVQFDGVFITYQTLNARANDL
                     AHRLRNQYGVEPNDRVAVIAEKSIEMIIAMIGVLKAGGAYVPIDPNYPSDRQEYILKD
                     VTPKVVITYQALYENGKQNINHIDLNKIAWKNIDNLSKCNTLEDHAYVIYTSGTTGNP
                     KGTLIPHRGIVRLVHQNHYVPLNEETTILLSGTIAFDAATFEIYGALLNGGKLIVAKK
                     EQLLNPIAVEQLINENDVNTMWLTSSLFNQIASERIEVLVPLKYLLIGGEVLNAKWVD
                     LLNQKPKHPQIINGYGPTENTTFTTTYNIPNKVPNRIPIGKPILGTHVYIMQGERRCG
                     VGIPGELCTSGFGLAAGYLNQPELTADKFIKDSNINQLMYRSGDIVRLLPDGNIDYLY
                     RKDKQVKIRGFRIELSEVEHALERIQGINKAVVIVQNHDQDQYIVAYYEAMHTLSHNK
                     IKSQLRMTLPEYMIPVNFMHIEQIPITINGKLDKKALPIMDYVDTDAYVAPSTDTEHL
                     LCQIFADILHVNQVGIHDNFFELGGHSLKATLVVNRIEASTGKRLQIGDLLQKPTVFE
                     LAQAIAKVQEQNYEVIPETIVKDDYVLSSAQKRMYLLWKSNHKDTVYNVPFLWRLSSE
                     LNVAQLRQAVQRLIARHEILRTQYIVVDDEVRQRIVADVAVDFEEVNTHFTDEQEIMR
                     QFVAPFNLEKPSQIRVRYIRSPLHAYLFIDTHHIINDGMSNIQLMNDLNALYQHKLLL
                     PLKLQYKDYSEWMSHRDMTKHRQYWLSQFKDEVPILSLPTDYVRPNIKTTNGAMMSFT
                     MNQQMRQLLQKYVEKHQITDFMFFMSVVMTLLSRYARKDDVVVGSVMSARMHKGTEQM
                     LGMFANTLVYRGQPSPDKMWTQFLQEVKEMSLEAYEHQEYPFECLVNDLDQSHDASRN
                     PLFDVMLVLQNNETNHAHFGHSKLTHIQPKSVTAKFDLSFIIEEDRDDYTINIEYNTD
                     LYHSETVRHMGNQCMIMIDYILKHQDTLQICDIPNGTEELLNWVNTHVNDRMLNVPGN
                     KSIISYFNEVVSRQGNHVALVMNDLTMTYETLRNYVDAIAHMLLSNGVGNGQRVALFT
                     ERSFEMIAAMLATVKVGASYIPIDIDFPNKRQGAILEDAKVTAVMSYGVEIETTLPVI
                     QLENAKGFVESKENEQYDDLHGNQLENTAMLDNEMYAIYTSGTTGMPKGVAIRQRNLL
                     NLVHAWSTELQLGDNEVFLQHANIVFDASVMEIYCCLLNGHTLVIPDREERVNPEQLQ
                     QLINKHRVTVASIPLQMCSVMEDFYIEKLITGGATSTASFVKYIEKHCGTYFNAYGPS
                     ESTVITSYWSHHCGDLIPETIPIGKPLSNIQVYIMSDGLLCGIGMPGELCIAGDSLAI
                     GYINRPELMADKWQNNPFGKGKLYHSGDLARYTSDGQIEFLGRIDKQVKVNGYRIELD
                     EIENAILAIRGISDCVVTVSHFDTHDILNAYYVGEQQVEQDLKQYLNDQLPKYMIPKT
                     ITHIDCMPLTTNDKVDTTRLPNPSPIQQSNKVYSEPSNEIEQTFVDVFGEVLKQNDVG
                     VDDDFFELGGNSLEAMLVVSHLKRFGHHISMQTLYQYKTVRQIVNYMYQNQQSLVALP
                     DNLSELQKIVMSRYNLGILEDSLSHRPLGNTLLTGATGFLGAYLIEVLQGYSHRIYCF
                     IRADNEEIAWYKLMTNLNDYFSEETVEIMLSNIEVIVGDFECMDDVVLPENMDTIIHA
                     GARTDHFGDDDEFEKVNVQGTVDVIRLAQQHHARLIYVSTISVGTYFDIDTEDVTFSE
                     ADVYKGQLLTSPYTRSKFYSELKVLEAVNNGLDGRIVRVGNLTNPYNGRWHMRNIKTN
                     RFSMVMNDLLQLDCIGVSMAEMPVDFSFVDTTARQIVALAQVNTPQIIYHVLSPNKMP
                     VKSLLECVKRKEIELVSDESFNEILQKQDMYETIGLTSVDREQQLAMIDTTLTLKIMN
                     HISEKWPTITNNWLYHWAQYIKTIFNK"
     gene            complement(9213..10463)
                     /locus_tag="O7798_000463"
     CDS             complement(9213..10463)
                     /locus_tag="O7798_000463"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498742.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HDC2862739.1"
                     /translation="MKRLSTTLKVRLISNFLQLIITTAFIPFIALYLTDMLSQSIVGI
                     YLVGLVVLKFPLSIISGYLIEIFPKKLLVLIYQATMVIMLVFMGVFGSHQLWQIIGFC
                     VAYAIFTIVWGLQFPVMDTLIMDAITEDVEHYIYKISYWMTNLSVAIGALLGGLMYGY
                     SMLLLFLIAACIFLIVLFILYIWLPQDRNQVKQSDDKRHASRYQKLQIMNIFRSYKLV
                     LKDRNYMLLISGFSIIMMGEFSISSYIAIRLKDQFETISIGSYDITGAKMLAILLMIN
                     TVVVILLTYSISKVVLKIDFKKALITGLLIYIVGYSGLTYLNQFGLLVVFMIIATVGE
                     IIYSPIVSEQRFKIIPKAKRGTYSAVNALGIHFSETLARLGIVLGVFLTSLQMGLYMF
                     IVLTIGASMLVAGVFGGQKQVNTN"
     gene            complement(10849..11874)
                     /locus_tag="O7798_000464"
     CDS             complement(10849..11874)
                     /locus_tag="O7798_000464"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498741.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent formate dehydrogenase"
                     /protein_id="HDC2862740.1"
                     /translation="MKIVALFPEAVEGQENQLLNTKKALGLKTFLEERGHEFIILADN
                     GEDLDKHLPDMDVIISAPFYPAYMTRERIEKAPNLKLAITAGVGSDHVDLAAASEHNI
                     GVVEVTGSNTVSVAEHAVMDLLILLRNYEEGHRQSVEGEWNLSQVGNHAHELQHKTIG
                     IFGFGRIGQLVAERLAPFNVTLQHYDPINQQDHKLSKFVSFDELVSTSDAITIHAPLT
                     PETDNLFDKDVLSRMKKHSYLVNTARGKIVNRDALVEALASEHLQGYAGDVWYPQPAP
                     ADHPWRTMPRNAMTVHYSGMTLEAQKRIEDGVKDILERFFNHEPFQDKDIIVASGRIA
                     SKSYTAK"
     gene            complement(12047..12406)
                     /locus_tag="O7798_000465"
     CDS             complement(12047..12406)
                     /locus_tag="O7798_000465"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498740.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2294 domain-containing protein"
                     /protein_id="HDC2862741.1"
                     /translation="MNTIDTHTKEQQFSNLVRSYRKEYVGKGPNSIRVSFKDNWAIAH
                     MTGVLSKVESFYLNDKRNESMLHYTRTEKIKQMYKEIDVNEMESLVGAKFVKLFTDID
                     LNDDEVISIFVFDKSIE"
     gene            complement(12623..13654)
                     /locus_tag="O7798_000466"
     CDS             complement(12623..13654)
                     /locus_tag="O7798_000466"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498739.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA/acyl-ACP dehydrogenase"
                     /protein_id="HDC2862742.1"
                     /translation="MTLETLIKEQLDPHLVEVDEGTYYPRTFIQQLFVDGYFGEAALR
                     KNAEVIEAVSQSCLTTGFCLWCQLAFSTYLENATQPHLNNDLQQQLLSGEILGATGLS
                     NPMKSFNDLEKLNLEHTYVDGQLVVSGRMPAVSNIQEDHYFGAISKHESSDEFVMFIL
                     RANQDGITLVEKTNFLGVNGSATYQITLNQVVVPQSQIITHDAKQFAATIRPQFIAYQ
                     IPIGLGSIKSSLELIDAFSNVQNGINQYLEYDVEAFKKRYRQLREEYYAILDDGNLTS
                     HLNELISLKKDIGYLLLDVNQASVVNGGSRAYTPYSPQVRKLKEGFFFAALTPTLRHL
                     GKLEAELKG"
     gene            complement(13667..14428)
                     /locus_tag="O7798_000467"
     CDS             complement(13667..14428)
                     /locus_tag="O7798_000467"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498738.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HDC2862743.1"
                     /translation="MTRPTNNKFILPIITFIIFLGIWEMVIIIGHYQPVLLPGPALVG
                     KSIWSFIVTGEIFQHLAISLWRFVAGFVVALLVAIPLGFLLGRNRWLYNAIEPLFQLI
                     RPISPIAWAPFVVLWFGIGSLPAIAIIFIAAFFPIVFNTIKGVRDIEPQYLKIAANLN
                     LTGWSLYRNILFPGAFKQIMAGIHMAVGTSWIFLVSGEMIGAQSGLGFLIVDARNMLN
                     LEDVLAAIFFIGLFGFIIDRFISYIEQFILRRFGE"
     gene            complement(14425..15399)
                     /locus_tag="O7798_000468"
     CDS             complement(14425..15399)
                     /locus_tag="O7798_000468"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498737.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HDC2862744.1"
                     /translation="MKRLSIIVIIGIFIITGCDWQRTSKERSKNAQNQQVIKIGYLPI
                     THSANLMMTKKLLSQYNHPKYKLELVKFNNWPDLMDALNSGRIDGASTLIELAMKSKQ
                     KGSNIKAVALGHHEGNVIMGQKGMHLNEFNNNGDDYHFGIPHRYSTHYLLLEELRKQL
                     KIKPGHFSYHEMSPAEMPAALSEHRITGYSVAEPFGALGEKLGKGKTLKHGDDVIPDA
                     YCCVLVLRGELLDQHKDVAQAFVQDYKKSGFKMNDRKQSVDIMTHHFKQSRDVLTQSA
                     AWTSYGDLTIKPSGYQEITTLVKQHHLFNPPAYDDFVEPSLYKEASRS"
     gene            complement(15413..16153)
                     /locus_tag="O7798_000469"
     CDS             complement(15413..16153)
                     /locus_tag="O7798_000469"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498736.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HDC2862745.1"
                     /translation="MIKIQQLQHHFGSHKVIHNFNLDISKGEIVTFIGKSGCGKSTLL
                     NIIVGFIHPSSGRVIIDNEIKQQPSPDCLMLFQHHNLLPWKTINDNIRIGLQQKISDE
                     EINAQLKLVDLEDRGKHFPEQLSGGMKQRVALCRAHVHKPNVILMDEPLGALDAFTRY
                     KLQDQLVQLKHKTQSTIILVTHDIDEAIYLSDRIVLLGEGCNIISQYEITASHPRSRN
                     DSHLLKIRNEIMETFALNHHQVEPEYYL"
     gene            complement(16495..17007)
                     /locus_tag="O7798_000470"
     CDS             complement(16495..17007)
                     /locus_tag="O7798_000470"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498735.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4242 domain-containing protein"
                     /protein_id="HDC2862746.1"
                     /translation="MTLFLLEANNLDFASTKEELEAKAASLSTKTIPTLIEVQATENL
                     THGYFIVEANDEAEAKQFLTEADISIQLVKEVRLVGKDLDEVKNGDAHVDYLVTWNIP
                     EGITMDQYLARKKKNSVHYEEVPEVEFKRTYVCEDMSKCICLYNAPDEEAVRRARKAV
                     DTPIDGIEKL"
     gene            17186..17389
                     /locus_tag="O7798_000471"
     CDS             17186..17389
                     /locus_tag="O7798_000471"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498734.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDC2862747.1"
                     /translation="MDKESVVASLARNKKIAVETMAGQRYIIERILHTNDEKHIHILK
                     PKDVVLDVDSIKEIDENHLNDAT"
     gene            complement(17451..18410)
                     /locus_tag="O7798_000472"
     CDS             complement(17451..18410)
                     /locus_tag="O7798_000472"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498733.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cation transporter"
                     /protein_id="HDC2862748.1"
                     /translation="MNGKKANTINRYKYFHHVNHQKIQQSSKKTLWASLIITLLFTVI
                     EFVGGLVSNSLALLSDSFHMLSDVLALGLSMLAIYFASKKPTARYTFGYLRFEILAAF
                     LNGLALIVISIWILYEAIVRIIYPQPIESGIMFMIASIGLLVNIILTVILVRSLKQED
                     NINIQSALWHFMGDLLNSIGVIVAVVLIYFTGWRIIDPIISIVISLIILRGGYKITRN
                     AWLILMESVPQHLDTDQIMADIKNIDGILDVHEFHLWSITTEHYSLSAHVVLDKKYEG
                     DDYQAIDQVSSLLKEKYGIAHSTLQIENLQLNPLDEPYFDKLT"
     gene            complement(19071..20558)
                     /locus_tag="O7798_000473"
     CDS             complement(19071..20558)
                     /locus_tag="O7798_000473"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498732.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aldehyde dehydrogenase family protein"
                     /protein_id="HDC2862749.1"
                     /translation="MAVNVRDYIAENYGLFINGEFVKGSSDETIEVTNPATGETLSHI
                     TRAKDKDVDHAVKVAQEAFESWSLTSKSERAQMLRDIGDKLMAQKDKIAMIETLNNGK
                     PIRETTAIDIPFAARHFHYFASVIETEEGTVNDIDKDTMSIVRHEPIGVVGAVVAWNF
                     PMLLAAWKIAPAIAAGNTIVIQPSSSTPLSLLEVAKIFQEVLPKGVVNILTGKGSESG
                     NAIFNHDGVDKLSFTGSTDVGYQVAEAAAKHLVPATLELGGKSANIILDDANLDLAVE
                     GIQLGILFNQGEVCSAGSRLLVHEKIYDQLVPRLQEAFSNIKVGNPQDEATQMGSQTG
                     KDQLDKIQSYIDAAKESDAQILAGGHRLTENGLDKGFFFEPTLIAVPDNHHKLAQEEI
                     FGPVLTVIKVKDDQEAIDIANDSEYGLAGGVFSQNITRALNIAKAVRTGRIWINTYNQ
                     VPEGAPFGGYKKSGIGRETYKGALSNYQQVKNIYIDTSNALKGLY"
     gene            20985..21368
                     /locus_tag="O7798_000474"
     CDS             20985..21368
                     /locus_tag="O7798_000474"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498731.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YbaN family protein"
                     /protein_id="HDC2862750.1"
                     /translation="MRLILIVIGLIFTALGIAGAVLPLLPTTPFLLVAVFCFARSSDR
                     FYNWLINQKIYKEYVENFYLHRGYTLQQKIKILISLYIVIGFSIYMVDVLAVRVGLII
                     MVIIQTAVLFTFVKTLPKSNHKIEE"
     gene            21375..21701
                     /gene="isdI"
                     /locus_tag="O7798_000475"
     CDS             21375..21701
                     /gene="isdI"
                     /locus_tag="O7798_000475"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498730.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="staphylobilin-forming heme oxygenase IsdI"
                     /protein_id="HDC2862751.1"
                     /translation="MFMAENRLQLQKGSAEETIERFYNRQGIETIEGFQQMFVTKTLN
                     TEDTDEVKILTIWESEDSFNNWLNSDVFKEAHKNVRLKSDDDGQQSPILSNKVFKYDI
                     GYHYQK"
     gene            complement(21766..22911)
                     /gene="cap8P"
                     /locus_tag="O7798_000476"
     CDS             complement(21766..22911)
                     /gene="cap8P"
                     /locus_tag="O7798_000476"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498729.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type 8 capsular polysaccharide synthesis protein
                     Cap8P"
                     /protein_id="HDC2862752.1"
                     /translation="MKKIMVIFGTRPEAIKMAPLVKEIDHNGNFEANIVITAQHRDML
                     DSVLSIFDIQADHDLNIMQDQQTLAGLTANALAKLDSIINEEQPDMILVHGDTTTTFV
                     GSLAAFYHQIPVGHVEAGLRTHQKYSPFPEELNRVMVSNIAELNFAPTVIAAKNLLFE
                     NKDKERIFITGNTVIDALSTTVQNDFVSTIINKHKGKKVVLLTAHRRENIGEPMHQIF
                     KAVRDLADEYKDVVFIYPMHRNPKVRAIAEKYLSGSNRIELIEPLDAIEFHNFTNQSY
                     LVLTDSGGIQEEAPTFGKPVLVLRNHTERPEGVEAGTSRVIGTDYDNIVRNVKQLIED
                     DEAYQRMSQANNPYGDGQASRRICEAIEYYFGLRTDKPDEFVPLRHK"
     gene            complement(22988..24250)
                     /gene="cap8O"
                     /locus_tag="O7798_000477"
     CDS             complement(22988..24250)
                     /gene="cap8O"
                     /locus_tag="O7798_000477"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498728.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type 8 capsular polysaccharide synthesis protein
                     Cap8O"
                     /protein_id="HDC2862753.1"
                     /translation="MKLTVVGLGYIGLPTSIMFAKHGVDVLGVDINQQTIDKLQSGQI
                     SIEEPGLQEVYEEVLSSGKLKVSTTPDASDVFIIAVPTPNNDDQYRSCDISLVMRALD
                     SILSFLEKGNTIIVESTIAPKTMDDFVKPVIENLGFTIGEDIYLVHCPERVLPGKILE
                     ELVHNNRIIGGVTEACIEAGKRVYRTFVQGEMIETDARTAEMSKLMENTYRDVNIALA
                     NELTKICNNLNINVLDVIEMANKHPRVNIHQPGPGVGGHCLAVDPYFIIAKDPENAKL
                     IQTGREINNSMPAYVVDTTKQIIKVLSGNKVTVFGLTYKGDVDDIRESPAFDIYELLN
                     QEPDIEVCAYDPHVELDFVEHDMSHAVKDASLVLILSDHSEFKNLSDSHFDKMKHKVI
                     FDTKNVVKSSFEDVSYYNYGNIFNFIDK"
     gene            complement(24304..25191)
                     /gene="capN"
                     /locus_tag="O7798_000478"
     CDS             complement(24304..25191)
                     /gene="capN"
                     /locus_tag="O7798_000478"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498727.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="capsular polysaccharide type 5/8 biosynthesis
                     epimerase CapN"
                     /protein_id="HDC2862754.1"
                     /translation="MRKNILITGVHGYIGNALKDKLIEQGHQVDQINVRNQLWKSTSF
                     KDYDVLIHTAALVHNNSPQARLSDYMQVNMLPTKQLAQKAKAEDVKQFIFMSTMAVYG
                     KEGHVGKSDQVDTQTPMNPTTNYGISKKFAEQALQELISDSFKVAIVRPPMIYGAHCP
                     GNFQRLMQLSKRLPIIPNINNQRSALYIKHLTAFIDQLISLEVTGVYHPQDSFYFDTS
                     SVMYEIRRQSHRKTVLINMPSMLNKYFNKLSVFRKLFGNLIYSNTLYENNNALEIIPG
                     KMSLVIADIMDETTTKDKA"
     gene            complement(25191..25748)
                     /gene="cap8M"
                     /locus_tag="O7798_000479"
     CDS             complement(25191..25748)
                     /gene="cap8M"
                     /locus_tag="O7798_000479"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498726.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type 8 capsular polysaccharide synthesis protein
                     Cap8M"
                     /protein_id="HDC2862755.1"
                     /translation="MKRLFDVVSSIYGLVVLSPILLITALLIKMESPGPAIFKQKRPT
                     INNELFNIYKFRSMKIDTPNVATDLMDSTSYITKTGKVIRKTSIDELPQLLNVLKGEM
                     SIVGPRPALYNQYELIEKRTKANVHTIRPGVTGLAQVMGRDDITDDQKVAYDHYYLTH
                     QSMMLDMYIIYKTIKNIVTSEGVHH"
     gene            complement(25759..26964)
                     /gene="cap8L"
                     /locus_tag="O7798_000480"
     CDS             complement(25759..26964)
                     /gene="cap8L"
                     /locus_tag="O7798_000480"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498725.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type 8 capsular polysaccharide synthesis protein
                     Cap8L"
                     /protein_id="HDC2862756.1"
                     /translation="MSEKKILILCQYFYPEYVSSATLPTQLAEDLIANHINVDVMCGW
                     PYEYSNHKQVSKTEMHRGIRIRRLKYSRFNNKSKVGRIINFFSLFSKFVINIPKMLKY
                     DQILVYSNPPILPLIPDVLHRLLKKKYSFVVYDIAPDNAIKTGATRPGSMIDKLMRYI
                     NRHVYKNAENVIVLGTEMKNYLLNHQISKNADNIHVIPNWYDMRQLQDNRIYNDTFKA
                     YREQYDKILLYSGNMGQLQDMETLISFLKLNKDQSQTLTILCGHGKKFADVKTAIEDH
                     RIENVKMFEFLTGTDYADVLKIADVCIASLIKEGVGLGVPSKNYGYLAAKKALVLIMD
                     KQSDIVQHVEQYDAGIQIDNGDAHAIYNFINTHSSKELHEMGERAHQLFKDKYTREIN
                     TMKYYNLLK"
     gene            complement(26965..28170)
                     /locus_tag="O7798_000481"
     CDS             complement(26965..28170)
                     /locus_tag="O7798_000481"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498724.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="capsular biosynthesis protein"
                     /protein_id="HDC2862757.1"
                     /translation="MAKKVFIMDSVKTIIGTLLIALGLQFLAYPIINQRVGNEAFGSI
                     LTIYTIITITSVVLGNTLNNIRLINMNLYKSNHYYWKFASILLISILIESIALIIVFL
                     YFFNLNIIDIIFLILLNILMCLRIYLNVFFRMTLKYNQILYIALIQFLGLLIGLFLYY
                     LTQNWIVCFITSELFATIYTLVKLRGLTIGEYQSEDNNVVKDYVMLLSTNSLNNLNLY
                     LDRLILLPIIGGTAVTISFLSTFIGKMLATFLYPINNVVLSYISVNESDNIKKQYLKT
                     NLIAIAALCLVMIICYPITIIIVSLLYNIDSSLYSKFIILGNIGVLFNAVSIMIQTLN
                     TKHASITLQANYMTLHTITFIFITILMTIAFGLNGFFWTTLFSNIIKYVILNIIGLKS
                     KFINKKDVD"
     gene            complement(28163..29329)
                     /locus_tag="O7798_000482"
     CDS             complement(28163..29329)
                     /locus_tag="O7798_000482"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498723.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="O-antigen ligase family protein"
                     /protein_id="HDC2862758.1"
                     /translation="MKFFVLCAIISMNIFIVISTFTKEVLGFPIEPVYYSTMVGIALI
                     TTVFAIYKIIVTQEIPRGLILLIAICLLYLAFYYFSPDKEEKLAKNNILFFLTWAVPA
                     AISGIYIKYINKATVERFFKLVFFIFSVSFIFVILIPKLTGEIPSYINFGLMNYQNAS
                     YLSAFTAGLGIYFIMKGSVKHKWIYVLFTIIDIPIVFIPGGRGGAILLILYGLFAFIL
                     ITFKRGIPIAVKSIMYIFALSISSVLIYFLFTKGSNTRTFSYLQGGTLNLEGTSGRGP
                     IYEKGIYFIQQSSLLGYGPFNYYKLIGNIPHNIIIELILSFGLLGFFIIMICILLLVY
                     KMIRNYDPNTIDLLVMFIAIYPITLLMFSSNYLVVSEFWFVLFYFITKGRRHHG"
     gene            complement(29343..30452)
                     /locus_tag="O7798_000483"
     CDS             complement(29343..30452)
                     /locus_tag="O7798_000483"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498722.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HDC2862759.1"
                     /translation="MRILNIVSSNIVQDPRVLKQIETIKGVTDDYKIVGMNNSQATNK
                     RLENLDCNYRLLGSKVDPKNILSKLIKRIRFATGVIREIKAYKPDVIHANDFDVLLMV
                     YLSNYKKANIVYDAHEIYAKNAFINKVPLISKFVESIEKHIVKHRVNAFVTVSHAAKE
                     YYQSKGYKKEANVITNAPILNDSREFKEIENFKEIVYQGQIVMDRGYEEFIIASSAFK
                     QNAPSFIIRGFGPHEEVIKELISYNPENIRLDKPVEVKELVDKLAESNVGVVLTKPVS
                     INFEYTVSNKIFECIHAGLPVILSPVKEHIYLNEKYKFGIVLKEVTPLEIEKAVRKLR
                     DNHDLFNHLRQNAIKASKILNWQIESERLVELYKF"
     gene            complement(30457..31083)
                     /locus_tag="O7798_000484"
     CDS             complement(30457..31083)
                     /locus_tag="O7798_000484"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498721.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="antibiotic acetyltransferase"
                     /protein_id="HDC2862760.1"
                     /translation="MRIAIEKIIGLLKNQSSKESNVKIHRLAYITNSKFDGNNYIDRW
                     CKIRNSHIGEYSYIGFGSDFNNVEVGRYCSISSDVKIGLGKHPTHFFSSSPIFYSNNN
                     PFNIKQKFIDFNDQPSRTTIKNDVWIGANVIIMDGLTINTGAVIAAGSVVTKNVGAYE
                     VVGGVPAKVIKKRFDNKTIEKLLESKWWEKTPDKLKGFSVEYLNKKDT"
     gene            complement(31086..32210)
                     /gene="cap8G"
                     /locus_tag="O7798_000485"
     CDS             complement(31086..32210)
                     /gene="cap8G"
                     /locus_tag="O7798_000485"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498720.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type 8 capsular polysaccharide synthesis protein
                     Cap8G"
                     /protein_id="HDC2862761.1"
                     /translation="MEKLKLMTIVGTRPEIIRLSSTIKACDQYFNQILVHTGQNYDYT
                     LNQIFFDDLELRQPDHYLEAVGSNLGETMGNIIAKTYDVLLREQPDALLILGDTNSCL
                     AAVSAKRLKIPVFHMEAGNRCFDQNVPEEINRKIVDHVSDVNLPYTEHSRRYLLDEGF
                     NKANIFVTGSPMTEVIEAHRDKINHSDVLNKLGLEPQQYILVSAHREENIDNEKNFKS
                     LMNAINDIAKKYKMPVIYSTHPRSWKKIEESKFEFDPLVKQLKPFGFFDYNALQKDAF
                     VVLSDSGTLSEESSILKFPGVLIRTSTERPEVLDKGTVIVGGITYNNLIQSVELAREM
                     QNNNEPMIDAIDYKDTNVSTKVVKIIQSYKDIINRNTWRK"
     gene            complement(32214..33323)
                     /gene="cap8F"
                     /locus_tag="O7798_000486"
     CDS             complement(32214..33323)
                     /gene="cap8F"
                     /locus_tag="O7798_000486"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498719.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type 8 capsular polysaccharide synthesis protein
                     Cap8F"
                     /protein_id="HDC2862762.1"
                     /translation="MNIVITGAKGFVGKNLKADLTSTTDHHIFEVHRQTKEEELESAL
                     LKADFVVHLAGVNRPEHDKEFSLGNVSYLDHVLDILTRNTKKPAILLSSSIQATQDNP
                     YGESKLQGEQLLREYAEEYGNTVYIYRWPNLFGKWCKPNYNSVIATFCYKIARNEEIQ
                     VNDRNVELTLNYVDDIVAEIKRAIEGTPTIENGVPTVPNVFKVTLGEIVDLLYKFKQS
                     RLDRTLPKLDNLFEKDLYSTYLSYLPSTDFSYPLLMNVDDRGSFTEFIKTPDRGQVSV
                     NISKPGITKGNHWHHTKNEKFLVVSGKGVIRFRHVNDDEIIEYYVSGDKLEVVDIPVG
                     YTHNIENLGDTDMVTIMWVNEMFDPNQPDTYFLEV"
     gene            complement(33336..34364)
                     /gene="cap8E"
                     /locus_tag="O7798_000487"
     CDS             complement(33336..34364)
                     /gene="cap8E"
                     /locus_tag="O7798_000487"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498718.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type 8 capsular polysaccharide synthesis protein
                     Cap8E"
                     /protein_id="HDC2862763.1"
                     /translation="MFDDKILLITGGTGSFGNAVMKQFLDSNIKEIRIFSRDEKKQDD
                     IRKKYNNSKLKFYIGDVRDSQSVETAMRDVDYVFHAAALKQVPSCEFFPVEAVKTNII
                     GTENVLQSAIHQNVKKVICLSTDKAAYPINAMGISKAMMEKVFVAKSRNIRSEQTLIC
                     GTRYGNVMASRGSVIPLFIDKIKAGEPLTITDPDMTRFLMSLEDAVELVVHAFKHAET
                     GDIMVQKAPSSTVGDLATALLELFEADNAIEIIGTRHGEKKAETLLTREEYAQCEDMG
                     DYFRVPADSRDLNYSNYVETGNEKITQSYEYNSDNTHILTVEEIKEKLLTLEYVRNEL
                     NDYKASMR"
     gene            complement(34354..36177)
                     /gene="cap8D"
                     /locus_tag="O7798_000488"
     CDS             complement(34354..36177)
                     /gene="cap8D"
                     /locus_tag="O7798_000488"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498717.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type 8 capsular polysaccharide synthesis protein
                     Cap8D"
                     /protein_id="HDC2862764.1"
                     /translation="MAHLSVKLRLLILALIDSLIVTFSVFVSYYILEPYFKTYSVKLL
                     ILAAISLFISHHISAFIFNMYHRAWEYASVSELILIVKAVTTSIVITMVVVTIVTGNR
                     PFFRLYLITWMMHLILIGGSRLFWRIYRKYLGGKSFNKKPTLVVGAGQAGSMLIRQML
                     KSDEMKLEPVLAVDDDEHKRNITITEGVKVQGKIADIPELVRKYKIKKIIIAIPTIGQ
                     ERLKEINNICHMDGVELLKMPNIEDVMSGELEVNQLKKVEVEDLLGRDPVELDMDMIS
                     NELTNKTILVTGAGGSIGSEICRQVCNFYPERIILLGHGENSIYLINRELRNRFGKNV
                     DIVPIIADVQNRARMFEIMETYKPYAVYHAAAHKHVPLMEDNPEEAVRNNILGTKNTA
                     EAAKNAEVKKFVMISTDKAVNPPNVMGASKRIAEMIIQSLNDETHRTNFVAVRFGNVL
                     GSRGSVIPLFKSQIEEGGPVTVTHPEMTRYFMTIPEASRLVLQAGALAEGGEVFVLDM
                     GEPVKIVDLARNLIKLSGKKEDDIRITYTGIRPGEKMFEELMNKDEVHPEQVFEKIYC
                     GKVQHMKCNEVEAIIQDIVNDFSKEKIINYANGKKGDNYVR"
     gene            complement(36197..36961)
                     /gene="cap8C"
                     /locus_tag="O7798_000489"
     CDS             complement(36197..36961)
                     /gene="cap8C"
                     /locus_tag="O7798_000489"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498716.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type 8 capsular polysaccharide synthesis protein
                     Cap8C"
                     /protein_id="HDC2862765.1"
                     /translation="MIDIHNHILPNIDDGPTNETEMMDLLKQATTQGVTEIIVTSHHL
                     HPRYTTPIEKVKSCLNHIESLEEVQALNLKFYYGQEIRITDQILNDIDRKVINGINDS
                     RYLLIEFPSNEVPHYTDQLFFELQSKGFVPIIAHPERNKAISQNLDILYDLINKGALS
                     QVTTASLAGISGKKIRKLAIQMIENNLTHFIGSDAHNTEIRPFLMKDLFNDKKLRDYY
                     EDMNGFISNAKLVVDDKKIPKRMPQQDYKQKRWFGL"
     gene            complement(36964..37650)
                     /gene="cap8B"
                     /locus_tag="O7798_000490"
     CDS             complement(36964..37650)
                     /gene="cap8B"
                     /locus_tag="O7798_000490"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498715.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type 8 capsular polysaccharide synthesis protein
                     Cap8B"
                     /protein_id="HDC2862766.1"
                     /translation="MSKKENTTTTLFVYEKPKSTISEKFRGIRSNIMFSKANGEVKRL
                     LVTSEKPGAGKSTVVSNVAITYAQAGYKTLVIDGDMRKPTQNYIFNEQNNNGLSSLII
                     GRTTMSEAITSTEIENLDLLTAGPVPPNPSELIGSERFKELVDLFNKRYDIIIVDTPP
                     VNTVTDAQLYARAIKDSLLVIDSEKNDKNEVKKAKALMEKAGSNILGVILNKTKVDKS
                     SSYYHYYGDE"
     gene            complement(37666..>38195)
                     /gene="capA"
                     /locus_tag="O7798_000491"
     CDS             complement(37666..>38195)
                     /gene="capA"
                     /locus_tag="O7798_000491"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498714.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="capsular polysaccharide type 5/8 biosynthesis
                     protein CapA"
                     /protein_id="HDC2862767.1"
                     /translation="TQILVNQTKGDNPQFMAQEVQSNIQLVNTYKEIVKSPRILDEVS
                     KDLNDKYSPSKLSSMLTITNQENTQLINIQVKSGHKQDSEKIANSFAKVTSKQIPKIM
                     SVDNVSILSKADGTAVKVAPKTVVNLIGAFFLGLVVALIYIFFKVIFDKRIKDEEDVE
                     KELGLPVLGSIQKFN"
BASE COUNT        12182 a         7278 c         5478 g        13257 t
ORIGIN      
        1 accttttaca aatttgttta tcaaaatatt ttaagttttg caaagctttt tattgtgatt
       61 attttcacaa aatactataa tgaggatagt aaatagagag gagtccttaa gttgacgaaa
      121 cgacaaatgg gtatattcat ttatgctgga attatcggtg gcttgttatc tggaattgta
      181 aaattaggtt gggaggtcat gtttccacct cgcacaccag aacgtaatgc aacgaaccca
      241 cctcaagagt tattgcaaca attaggattt agtagtgagt ttacgcatca aacatataca
      301 ttttcaaata tggaattgcc ttgggtaagc tttattgtcc actttagttt ttctatcgtc
      361 attgcaatta tttactgcat attagttaaa aaatacgctt acttagcaat gggacaaggt
      421 gctgtttttg gtattgctat ttgggtatta ttccacctta tcattatgcc aatcatgcat
      481 actgtacctg ctgtgtggga tcaaccattc caagagcatc tgtcagaatt ctttggccat
      541 atcgtctgga tgatgacaat tgaattagtg cgacaacatt ttgtctatcg ctataaatta
      601 aattaataca ctgactaaca ttaacgtgag ttttaaatca tcgtttgagt atgatgattg
      661 atgctcacgt tattttatta actgacatga tatgattcca gccaacttac gtgagcatta
      721 aagtctcaaa tgcgtcgtaa caaactatta ttttcggtaa tttcaatatt gctcagtata
      781 tttttacctt atcacttact ttaatctcgt catgattttg aatgatgcca tcgtgtattc
      841 acctttcatt tttccaataa aaaaacatct aacagtaaac atttaggcag tatagtttaa
      901 aatcactgcg caatgatact gtcagacgtc atattaacta ctcaataact gaaatacaga
      961 cactttttta taaccccagg gtgcctgtcc taagaaacat acctgtacca taaactgatc
     1021 aaaaataaat tgtttgaact tcacttcacg tgattgataa aagtgtgatt gtgtcatatc
     1081 ataaatgtcc aatcctttga ttaaaccttc accaatcaat tttgtaaaac tttctttttg
     1141 tgtccatatt tgataaaaat catttaaact acatatttga tgtgcttcgt ttgtagagaa
     1201 acacgtcact aacgtacgcc agtctaaacg ttgtgatatc ttttcgatat caataccaac
     1261 tggttcttta tcgacaacac acacgatata aggataacta tatgataagc tcacatagat
     1321 gggctgtcca tcacgattgt gttgaacaat atctgcctta cctcgtggcg aaatgtgata
     1381 atgccattca tgtggtaata aacctgtgtc atgttgaatt ccatattgca ctaaaatatc
     1441 tcccaatctg tgcatgagtt tatcttgatt gtatctatag ttgactgtac gcggtttttt
     1501 atatgaccaa cgactttgtg atattaattc ttcaatactt ttcaagttac tctgtaattg
     1561 cattacaaat actgtcataa ctttccctac ttacttattg aatattgttt tgatatattg
     1621 tgcccaatga tacagccaat tgttagttat cgttggccat ttttcactga tgtgattcat
     1681 tatttttaat gttaatgttg tatctatcat tgctagttgt tgttcacggt caacactagt
     1741 taatccaatc gtttcgtaca tgtcttgttt ctgtaaaatt tcattaaatg attcatcgct
     1801 gacgagttca atttctttgc gcttaacgca ttctaacaaa gatttcaccg gcattttatt
     1861 aggtgatagc acatggtaaa tgatttgtgg tgtgttgacc tgtgctaatg cgacaatttg
     1921 tcttgcagtc gtatccacaa aagaaaaatc tacaggcatt tcagccatgc taaccccgat
     1981 acaatccagt tgtaacaaat cattcattac cattgaaaaa cggttagtct ttatatttct
     2041 catatgccat cttccattgt aaggattcgt caaattacca acacgtacaa tccgaccatc
     2101 taagccatta tttacagctt ctaatacttt taattcacta taaaatttgc tccgtgtata
     2161 tggtgatgtt agtagttgcc ctttatagac atccgcttct gaaaatgtca catcttctgt
     2221 gtctatatca aaataagttc ccacacttat cgtagacaca tatattaacc ttgcatgatg
     2281 ttgttgtgcc aaacgtatga catcaacagt accttgaaca tttacttttt caaattcatc
     2341 atcatcacca aagtgatctg tacgagcacc tgcatgaata atcgtatcca tgttttctgg
     2401 taaaacaaca tcatccatac actcgaaatc accaacaatg acttcaatgt ttgataacat
     2461 tatttcaacc gtctcttctg aaaaataatc atttaaattc gtcatcaact tataccatgc
     2521 tatttcctca ttatcagcac gtatgaaaca ataaatgcga tgactgtatc cttgtagtac
     2581 ttcaatcaga taagcaccta aaaaacctgt cgcgccagtc aatagtgtat ttcctagagg
     2641 tcgatgactt agactatcct ctaaaatacc caagttataa cgagacataa caatcttttg
     2701 taattccgaa agattatccg gtaatgcaac taatgattgt tgattttggt acatataatt
     2761 aacaatctgt cgcacggttt tatattggta taatgtctgc attgaaatat gatggccaaa
     2821 tcgttttaaa tgcgagacaa ctaacatcgc ctctaatgag ttaccaccaa gttcaaagaa
     2881 atcatcgtca acaccgacat cattttgttt caatacctct ccaaatacat caacaaatgt
     2941 ctgctcaatt tcattagagg gttcgctata cactttatta gactgttgta taggtgatgg
     3001 atttggcaaa cgcgtagtat ccaccttgtc attcgtggtt aatggcatac aatcgatatg
     3061 cgttatagtc ttaggaatca tatacttagg cagctgatca tttaaatatt gcttcaaatc
     3121 ctgttccact tgttgctctc cgacataata agcattcaat atatcatgcg tatcaaagtg
     3181 acttactgtt acaacacaat cagatatacc acgaatagct aatattgcat tttcaatttc
     3241 atcaagttca atacggtacc cgttaacttt cacttgttta tctattcttc ctaaaaattc
     3301 aatttgacca tcagatgtat aacgtgctaa atcaccacta tgatacaact ttcctttacc
     3361 aaatggatta ttttgccatt tatcagccat taattctgga cgattaatat atcctatcgc
     3421 taaactatca cctgcaatac acaactcgcc tggcatacca ataccgcata acaaaccatc
     3481 tgacataata tacacttgga tgttagataa gggtttgcca attggaatcg tctcaggtat
     3541 caaatcacca caatgatgtg accaatacga tgtgatgact gttgactcag atggtccata
     3601 ggcattgaaa tacgtgccac aatgcttctc aatatattta acaaaggatg ccgtactagt
     3661 tgccccgcct gtaatcaact tttcaatata aaagtcttcc ataacactac acatctgtaa
     3721 cggaatcgac gcaaccgtca cacgatgctt attaatgagt tgttgtaact gttctggatt
     3781 aacacgttcc tctctatctg gaatcacaag cgtatgacca tttaacaaac aacaataaat
     3841 ctccataact gatgcatcaa aaacaatatt tgcatgttgc aaaaatactt cattgtcgcc
     3901 taattgcaat tcagttgacc atgcatgcac taaattcaac aaatttcgtt gtcgtatggc
     3961 aaccccttta ggcatcccgg tcgtaccaga tgtgtaaata gcatacatct cattatctaa
     4021 catcgctgtg ttttcaagtt gattgccatg taaatcatca tattgttcat tttcctttga
     4081 ttccacaaag cctttagcat tttccaattg aatgactggt aatgtcgttt caatttcaac
     4141 gccgtaagac atgactgcag ttactttagc atcctccaaa attgcacctt gtcgtttatt
     4201 cggaaaatca atatcgatag gtatataaga tgcacctact ttaactgtcg ccaacatcgc
     4261 cgcaatcatt tcaaaactac gttctgtaaa caaggcaacc cgttgaccat tgcccacacc
     4321 atttgatagg agcatgtgcg caatggcatc cacatagttg cgtaatgttt catacgtcat
     4381 tgtcaaatca ttcatgacta gcgcaacatg attaccttgt cgtgagacaa cttcattaaa
     4441 gtaacttatg atagatttat ttcccgggac attaagcatt cgatcgttaa catgcgtatt
     4501 gacccaattt agaagttcct ccgtgccgtt tggtatatca caaatttgta gtgtatcttg
     4561 atgcttcaaa atataatcaa tcataatcat acattgatta cccatgtgac gaactgtttc
     4621 tgagtgatat aaatcggtat tatactcgat attgattgta tagtcatcgc gatcttcttc
     4681 aatgatgaaa gataaatcaa atttcgccgt cactgatttg ggttgaatgt gtgttaattt
     4741 actatgccca aaatgagcat gattcgtttc attgttttgt agtactaaca tgacatcaaa
     4801 taatggattc cgtgaggcat catgtgattg atctaagtca tttactaaac attcgaatgg
     4861 gtattcttga tgctcgtatg cctccaaact catttcctta acctcttgta aaaactgtgt
     4921 ccacatttta tcaggtgacg gttgccctct atataccaac gtattagcaa acatgcctag
     4981 catttgctcc gtgcctttat gcatacgcgc actcatcaca ctaccgacaa caacatcatc
     5041 ttttcgagca tatctactta acaacgtcat gaccacactc ataaagaaca taaaatcagt
     5101 aatttgatgc ttttctacat acttttgaag tagctgtctc atttgttgat tcattgtaaa
     5161 tgacatcatt gctccatttg tcgttttaat atttggtcta acatagtctg tcggtaagct
     5221 taaaataggt acttcatctt tgaattgaga taaccaatat tgtctatgtt tcgtcatatc
     5281 acgatgcgac atccactcac tatagtcttt atattgcaat ttaagtggta acaataattt
     5341 atgttgataa agtgcgttaa gatcattcat taattgtata ttactcatac cgtcattaat
     5401 gatatgatgc gtatctataa agaggtatgc atgtaaggga cttctaatgt atctcactct
     5461 aatttgactt ggcttttcca aattaaaagg tgctacaaat tggcgcatga tttcttgttc
     5521 atccgtaaaa tgcgtgttaa cttcttcaaa gtcaactgca acatctgcca caatacgttg
     5581 tcgaacctca tcatctacaa caatatattg tgttcgtaaa atctcatgtc gcgctatcaa
     5641 acgctgcact gcttgtcgca attgagctac attaagttct gatgataacc gccataaaaa
     5701 aggtacgtta tacaccgtat ctttatggtt tgatttccat aataaataca tacgcttttg
     5761 tgcagagctc agcacataat catctttaac tatagtttct ggaatcactt catagttttg
     5821 ttcttgaacc ttagcaatcg cttgtgctag ttcaaataca gttggctttt gtaataaatc
     5881 accaatttgt aatcgtttcc cagtagatgc ctctatccga ttcaccacta acgttgcttt
     5941 taatgaatgg ccacctaatt caaagaaatt atcatgaata cctacttgat tcacatgtaa
     6001 aatatctgca aaaatttggc atagcaagtg ttcggtatct gtactcggtg ctacataggc
     6061 atccgtatcg acatagtcca tgataggcaa tgccttctta tctaatttcc cattaatagt
     6121 aataggaatt tgctcaatat gcatgaaatt aactggtatc atgtactccg gtaaggtcat
     6181 acgtaattgt gatttaatct tattatgtga taatgtatgc atcgcttcat aataagcaac
     6241 gatatactga tcttgatcat gattttgaac aataacaact gctttattaa taccttgtat
     6301 acgctcgagc gcatgctcaa cctctgacaa ctcaatccta aaccctcgaa tcttaacttg
     6361 tttgtccttt cgatataaat aatctatgtt gccatcgggt aacaaacgaa cgatatcacc
     6421 acttctatac atcagctgat ttatatttga atctttgata aatttatctg ctgtcaattc
     6481 tggctgattt aaataacctg cagctaaccc aaagccactt gtacataatt ctccaggaat
     6541 accaacgcca caccgacgct cgccttgcat gatataaaca tgagtaccca gaatcggttt
     6601 accaatagga atacgatttg gaactttgtt aggtatatta tacgtcgttg taaatgttgt
     6661 attttcagtt ggtccataac cattaataat ttgaggatgc ttcggttttt gattaagcaa
     6721 atccacccac ttagcattca atacttctcc accaattaat aaatacttta acggtaccaa
     6781 tacttctatt cgttcactag caatctgatt aaataatgag gaggttaacc acatagtatt
     6841 aacgtcattt tcattgatta attgttctac cgctattgga tttaataatt gttctttttt
     6901 agcaacaatc agctttccac cattgagcaa tgcaccatat atttcaaatg ttgcagcatc
     6961 aaaggctata gttcctgata acaaaatcgt cgtctcttca tttaatggta cataatgatt
     7021 ttgatggacc aagcgaacaa tacctcggtg cggaattagt gtccctttag ggttaccagt
     7081 tgtccccgac gtgtaaataa cataagcatg atcttctaac gtgttacatt tagaaagatt
     7141 atcaatattt ttccacgcta tcttattcaa atcaatgtga ttaatatttt gtttaccatt
     7201 ttcatataaa gcttggtacg ttattacaac tttaggcgtt acatctttta aaatgtactc
     7261 ctgacgatca cttggatagt tcggatcaat tggcacgtaa gccccaccag ctttcaacac
     7321 acctatcatc gctattatca tctcaatact tttttcagct atgacagcga cacgatcatt
     7381 aggttcaaca ccatactggt ttctcaaacg gtgtgctaaa tcattcgcgc gtgcattcaa
     7441 tgtttgatat gttataaaca ctccgtcaaa ttgcacagcg acatgattcg gcgttgcttc
     7501 aacttgttgc tcaaataagg taacaactgt ttgcgcatca tctatctcag gcaaacttaa
     7561 attgatatcg tcatataatt gaatatcacg ttctgtcatc aaattaagtt catctacagt
     7621 tgttcgttta tttccatttt cttcagtaat ttgcaaataa atatttcgaa ctaagtcact
     7681 cagcgtctcg attgagagca aatcatatgc tgcactgtta tatataattt tgaacccgtg
     7741 ttgatgtgga aaaatttcaa tatccgctaa agatgtatgt gcatcatgta tttgatgtac
     7801 atcctcaata acatcattac aacaagacat catatgatga taacaatgaa aaatagtctc
     7861 tagtgaaagc gaagacttcg cgcactgtaa ttgcgacata ttttgcaaca cacatttatt
     7921 aaaatctgtt gtaaaacgtt gacatacatc ttttgcatcg attgttaacg ttaacggcac
     7981 aatatttccg tgtaaatcat ttggtaaatg tgatggtaca tgtataccta atgtgacatc
     8041 atgttgttga ctcattatat gattagctaa atacacacta acagccaacg atgccatatc
     8101 tattgatgtc atatcatcaa tcaaatacgt ttgatataaa gcttgttcaa atggatgctt
     8161 aattggaaaa taactatcaa tatggatgtc agagttattc tctaaccgaa aatagtttga
     8221 gtctaatgct atatgcgatg catcttgatt gtctttatca tcatttctat ttatatgtgc
     8281 atgctgtcga gtattgttaa taacagtatt gccacgatat gcattgcata aatcatcaag
     8341 aaaaatatca atttgactat catcgaaaat ggacacatga aaatctaata gtatatatgc
     8401 agcatcagcg aactgaaaca atttaacttt gaataaaggt gaatcattaa aatggtaagt
     8461 acttaattct tgcttaaaaa aagcttctaa atcatagttt gcggaagaag atggaacttg
     8521 ttttatctca ataaaaggca gaaattcatg aagtatcatt gttaaattgt catcggtagt
     8581 aacatcaaaa aaatgtctta tagatgcatg ttgttgcaca attgtcgata atgcatacat
     8641 cattttagta gcttcaacat ttttagcgag tttaacccaa tacgcattac ggtgtgtcgt
     8701 tgattctgta ttatttttgt atatacgaaa atattcctgt tgaaatctca aattacccat
     8761 aatcataaaa agtccttctt tcatatcata atactcatta cttactgaaa ttgcatgatg
     8821 atatgataac cgacgaaatg ttaattaact cgttatgtaa tgattaatat aaaacaccat
     8881 tcgcaacata tgagcgatat attctaccct aaaatacatc ttgtatcatc gttacaattg
     8941 gtatattttt caatgtaaat tacatacatc ttcgataaat agcacactac aactcgttaa
     9001 tcactttctg ttgttcacat ctcattgcaa actcaatatt gttgttacaa aatatccatg
     9061 aagcaagttt atattaaaca aacaactcgc ataaaacaat tgttatcctt aaattttaac
     9121 aaattcttaa taaatttatc tctattttaa ttacgaccaa attaataggt tttccatata
     9181 aaaagatgca taaaataaat atttaaataa attcaatttg tattcacttg tttttgtccc
     9241 ccaaatacac cagcaacaag catgctagca ccaattgtta aaacgataaa catatacagt
     9301 cccatttgta atgacgttaa gaaaacaccc aacacaatcc ctaacctagc tagtgtttct
     9361 gaaaaatgaa tacctaatgc attaactgca ctatatgttc ctcttttagc tttaggaata
     9421 attttaaagc gttgttctga aactataggc gaataaataa tttcacctac agtcgcaatt
     9481 atcataaaaa caactaataa gccaaactga ttaagatagg ttagaccact atagccaaca
     9541 atataaatca gcaaaccagt gattaaagct tttttaaaat ctattttcaa tacaactttc
     9601 gagattgaat acgtgagtaa aatgacgacg accgtattaa tcattagcaa gattgctaac
     9661 atcttagcac ctgtaatatc atatgaacct atacttattg tttcaaactg atcctttagt
     9721 ctaatagcaa tatatgagga gattgaaaat tcacccatca tgatgatact gaaccccgaa
     9781 atcaataaca tataattacg gtctttcaaa actaatttat aactgcgaaa tatattcatt
     9841 atttgtaatt tttgataacg acttgcatgc ctcttgtcat cactttgctt tacttgattt
     9901 cggtcttgag gtaaccaaat atataaaata aagagtacaa ttaaaaatat acaagctgct
     9961 attaagaaaa gtagtaacat actgtagcca tacatcaagc cacctaacaa tgccccaata
    10021 gctaccgata agtttgtcat ccaatagcta atcttgtaaa tataatgttc cacgtcttcg
    10081 gtaattgcat ccataattaa tgtgtccata actggaaatt gtaatcccca aacgattgta
    10141 aatatggcat atgcaacaca aaaaccaata atttgccaca attgatgtga cccaaatacg
    10201 cccatgaaca caagcattat caccatcgtc gcttgataaa taagtactag caactttttc
    10261 ggaaatatct caataaggta accagatata atggacaatg gaaattttag aaccactaaa
    10321 ccaacaagat atataccgac aattgattga cttaacatat ctgttaaata tagtgctata
    10381 aacggtataa atgctgtcgt aataattagc tgtaaaaaat tgctaatcaa tcgtactttc
    10441 aaagtcgtac ttaagcgttt cattaataac tacacccctt tccacatata tacacactac
    10501 catttatata aaatctatta ttagattata cgttgaaaca aagaattttt agttatacaa
    10561 agttatttaa caaacaaatg catcgacttt acaatgcatc ttgcatataa tgcctcaaaa
    10621 aaattagcac tatatgacta tatattattc caaatgaatg aaatttatca ataattgcgt
    10681 aagtgaacac atatgtgcgt aaatgttaaa tcattgtcct aacatagccg tgactatact
    10741 tagatgtaat cataaaaaaa ctactgccat ctttacaaca gcagtagtgc ttatatgatt
    10801 catttatata aaattgaaag cgttaatcgc tagcccagca tccttattct atttagctgt
    10861 ataactttta ctagcaatac gaccacttgc aacaataata tctttatctt ggaaaggttc
    10921 atgattgaag aaacgctcta aaatatcttt aactccatct tcaatacgtt tttgtgcttc
    10981 taaagtcata cctgaatagt gaaccgtcat agcatttcta ggcattgttc tccatggatg
    11041 atcagcaggt gcaggttgtg gataccaaac atcaccagca tatccttgta aatgctcgga
    11101 tgctaacgct tcaactaacg catcgcgatt tacaatttta ccacgtgcag tattcactaa
    11161 ataactgtgt tttttcatac gacttaaaac atctttatca aataagttat cagtttctgg
    11221 tgttaatggt gcatgaattg taatcgcatc acttgttgaa acaagttcat caaagcttac
    11281 aaatttagac aatttatggt cttgttgatt gattggatca tagtgttgta atgttacatt
    11341 aaatggcgct aatctttcag caacaagttg tccaattcga ccaaatccaa aaataccaat
    11401 tgttttgtgt tgtaattcat gcgcatgatt acctacttga gacaagttcc attcaccttc
    11461 tactgattga cgatgacctt cttcatagtt tctaagaagt attaataaat ccataaccgc
    11521 atgttctgcc acactaactg tattacttcc tgtaacttca acgacaccaa tgttgtgttc
    11581 acttgctgcc gctaaatcta catggtcaga tcctacacct gctgtaattg ctaatttcaa
    11641 gttcggtgct ttttcaatac gttcacgagt catatatgca ggataaaatg gcgcactaat
    11701 aatcacatcc atatctggta aatgtttatc taagtcttca ccattatctg ctaatataat
    11761 gaactcatgt cctctttcct ctaaaaatgt ttttaatcct aatgcttttt tagtattaag
    11821 taattgattt tcttgacctt ctactgcttc tggaaataat gctacgattt tcatatccat
    11881 ctctcctaaa tgataaattt tgacttcctt aaagtacgtg ttgcatgttg cttgttttaa
    11941 aaatatgaca aaaaaacggc accgtttgac ataccacccc cttgaattat tgttaaattc
    12001 aaagcgaagt tagcaaacag caccgtgtac cttacaccag caacacttat tctattgact
    12061 tatcgaaaac aaatattgaa atgacttcat catcattcaa atcaatatct gtaaataatt
    12121 ttacaaactt agcgcctaca agactttcca tctcatttac atctatttct ttatacatct
    12181 gtttaatctt ctctgtgcgt gtataatgga gcatcgattc attgcgtttg tcgtttaggt
    12241 aaaaactctc aactttactc aaaacacctg tcatatgtgc aatcgcccaa ttatctttaa
    12301 acgacactcg aatactattg ggtcctttac ccacgtattc tttacgataa gatcttacta
    12361 gattcgagaa ttgttgttct ttagtatgcg tatctatagt attcaccttc tttaaaataa
    12421 gaagttcatt aattgttcac attttcatta tacaccttat taacactttt tcaatgataa
    12481 cgattattat tattacgaaa tgtatatttt cctagttaaa aggatataac aaattaacag
    12541 aaaatgttta taaactaaga tttatattat tttaaaaaat gtttcaacaa acgcatctaa
    12601 acaaaaaatc agcttatcac acttacccct tcaactctgc ttcaagttta cctaaatgtc
    12661 ttaatgtcgg tgtcaatgct gcgaagaaga atccttcttt taacttgcga acttgtggcg
    12721 aatatggtgt gtacgctcta gaaccaccat tgacaacaga agcttgattt acatctaaca
    12781 ataaatagcc gatgtccttc ttcaatgata ttaattcatt taaatgtgaa gttaagttac
    12841 cgtcatctaa tattgcataa tattcctctc taagttgacg ataacgtttt ttaaaagctt
    12901 caacatcata ctctaaatat tgatttattc cgttttgcac atttgaaaat gcatcaatta
    12961 actctaaaga acttttaatt gagcctaatc ctattggaat ttggtaagca ataaattgcg
    13021 ggcgaatagt tgccgcaaac tgcttcgcat catgcgtgat aatttgtgat tgtggcacta
    13081 cgacttgatt caatgtgatt tgatacgttg ctgacccgtt gactcctaaa aaattggttt
    13141 tttcaacaag agtgatacca tcttgattgg cacgtagaat gaacatgaca aattcatctg
    13201 atgattcatg tttcgaaatc gcaccaaaat aatggtcttc ttgaatatta cttacagctg
    13261 gcatacgtcc actgacaacc aattgtccat caacataagt gtgttcaagg ttcaactttt
    13321 ctaaatcatt aaatgacttc atcggattag acaatccggt agcacctaat atttctccag
    13381 ataacaattg ctgttgtaag tcattattta aatgtggctg cgtggcattt tctaaatacg
    13441 ttgaaaaagc taattggcac cataaacaaa atcctgttgt caaacaagac tgcgatacag
    13501 cttcgattac ttcagcattt tttctcaatg ccgcctcacc gaaataacca tctacaaata
    13561 attgctgaat aaatgttctc ggataatacg tcccttcatc aacttctact aaatgaggat
    13621 ctaattgttc tttgataagc gtttctaaag tcatcatcat ctctccttat tcaccaaatc
    13681 ttctaagtat aaactgctca atataactaa tgaatcgatc aataataaaa ccaaataatc
    13741 cgataaagaa tattgctgct aaaacatctt ctaagttcaa catatttcgt gcatcaacga
    13801 ttaaaaaacc taatcccgat tgtgcaccaa tcatttcacc agaaactaaa aatatccaac
    13861 ttgttcctac cgccatatgt atcccagcca tgatttgttt aaatgccccg ggaaataata
    13921 tattgcgata caatgaccac ccagttaaat ttaaatttgc tgctattttt aaatattgag
    13981 gttcaatgtc tctaacgcct ttaatagtat tgaacacaat tgggaaaaaa gcagcgataa
    14041 aaataatcgc aatcgctggc aaactaccaa taccaaacca tagaacaaca aatggtgccc
    14101 atgctatcgg agatatcggc ctaatcaatt gaaatagcgg ttcgatagcg ttgtatagcc
    14161 aacgattcct tccaagcaag aagcccaatg gaatagcaac caacaatgcg acaacaaagc
    14221 ccgctacaaa tctccataaa ctaattgcta aatgttggaa aatttctcca gtaacaatga
    14281 aagaccatat actttttcct acaagagcag gacccggtaa caatacaggt tggtaatgcc
    14341 caataataat gaccatttcc caaatgccta agaaaataat aaatgtgata ataggtaata
    14401 taaatttgtt atttgtggga cgtgtcatga acgcgatgcc tccttataca atgacggttc
    14461 aacaaagtca tcatatgcag gtggattaaa caaatgatgt tgttttacca atgtcgtaat
    14521 ttcttgatag ccggatggct taattgttaa atcaccatag gatgtccatg ccgctgactg
    14581 tgttaaaacg tcacgacttt gtttaaaatg atgcgtcata atgtctacac tttgcttgcg
    14641 atcattcatt ttaaagccag actttttata atcttgtaca aatgcttgcg ctacatcctt
    14701 gtgttgatca agcaattccc ctctcagtac tagcacacag caatacgcat caggtataac
    14761 gtcatcacca tgtttcaaag tcttaccttt gcctaacttt tcacccagtg caccgaatgg
    14821 ttcggctaca gaataccctg taattctgtg ttcactcaat gcggctggca tttctgctgg
    14881 cgacatttca tgatagctaa aatgccccgg tttaatcttt aattgtttac gtaattcctc
    14941 aagtaaaaga taatgtgttg aataacgatg tggtatacca aaatggtaat catcgccatt
    15001 attattaaat tcatttaagt gcataccttt ttgtcccata atgacattgc cttcatgatg
    15061 gcccaatgcc acagccttta tatttgagcc cttctgtttt gatttcatcg ctagctctat
    15121 taaagttgat gcaccatcaa tacgaccact gtttaatgcg tccattaaat ctggccaatt
    15181 attgaattta actaattcta gtttatattt cggatgattg tattgtgata ataatttttt
    15241 agtcatcatc aaattagctg aatgtgtaat cggcaaatat ccaattttaa tcacttgctg
    15301 attttgggca tttttagacc gttctttaga cgtcctttgc caatcacatc ctgtaattat
    15361 aaagattcca atgatgacga ttatgcttaa ccttttcatc gtcactcact ccttataaat
    15421 aatattcagg ttcaacttga tgatgattca atgcaaatgt ttccataatt tcattacgaa
    15481 tcttaagtag gtggctatca ttacgactgc gtggatgtga tgctgtaatt tcatattgag
    15541 aaataatatt gcacccttca cctaacagaa caatgcggtc ggaaagataa atagcttcat
    15601 caatgtcatg cgtcactaaa ataatagttg attgcgtttt atgttttagt tgcactagtt
    15661 gatcctgaag tttataacgt gtaaatgcat ctaatgcacc taatggctca tccatcaata
    15721 taacgttagg cttatgcaca tgcgctcgac atagtgccac acgttgtttc atacccccgg
    15781 acagttgctc gggaaaatgc tttcccctgt cttctaaatc aactaattta agctgtgcgt
    15841 taatctcttc atcactaatt ttctgttgta atccaatcct aatgttgtca ttaatcgttt
    15901 tccatggcag caaattatga tgttgaaata gcattaaaca atctggagat ggctgttgtt
    15961 taatttcgtt atcaataatg acacgaccag acgatggatg aataaatcca acgataatat
    16021 tgagtaaagt agactttccg caaccacttt tccctatgaa agtgactatt tctcccttgc
    16081 taatgtccaa attaaagtta tgaattactt tatgtgatcc aaagtgatgt tgtaattgtt
    16141 gaattttaat catgacaagc ccccttttaa tccctactat tttaatagga attaagtgta
    16201 tatctaaagg gctatgccaa acacagccct tatatcgtga attgttatat ctatagatga
    16261 ttatggtttg gtatgagtgc tcttataaca taagcgttat tcaattaacg acgttatatt
    16321 aatttcagct ctactaaatt tcaataaaat gattgtttta gacaatactt gcatttagtt
    16381 cattagtttc ttcatatcaa ctacttacat ttatagcatt gagctattct aattaactgc
    16441 aatcgaaatc catgccaaac ctatatacat atatctcatc aacttgttgt cttattaaag
    16501 tttttcgatg ccatcaatcg gtgtatcaac tgctttgcgc gcgcgacgta ccgcttcttc
    16561 atcaggtgcg ttgtataaac aaatacattt agacatatct tcacatacat atgtgcgttt
    16621 aaattcaact tctggcactt cttcataatg aacagaattt ttctttttac gtgctaaata
    16681 ttgatccatc gtaatgcctt ccggaatgtt ccaagttaca aggtaatcaa catgtgcatc
    16741 accattttta acttcatcta aatctttacc aactaagcgt acttctttga ctaattgaat
    16801 actaatatct gcttctgtta aaaattgttt agcttctgct tcgtcatttg cttccacaat
    16861 aaaataacca tgagttaaat tttcagtagc ttgtacttca attaatgttg gaattgtctt
    16921 cgtagatagt gatgctgcct ttgcttctag ttcttctttc gttgatgcaa aatcaagatt
    16981 gttagcttct aataaaaata atgtcattaa taagacctcc tataacaatg gttgaaaaaa
    17041 tattactata attcttatcg gattacaagg atattaagat atttttttaa atatttagat
    17101 aaaattctgt aaaatatatt ttcaaagagt ataaaaatca tgttagggta taagtaaata
    17161 aacatatata tagggggcta tcattatgga taaagaatct gtcgtagcaa gtttagctag
    17221 aaacaaaaag attgctgtag aaacaatggc cggtcaaagg tacatcatag aacgcatttt
    17281 acatacaaat gatgaaaaac atattcatat tttgaaacct aaagatgtcg tgttagatgt
    17341 agatagcatc aaagaaattg acgaaaatca tttaaatgat gcaacataag tataaaacga
    17401 aacgtgcgcc tatgacatag attaatgttt taggcgctac aatgttttat ttatgttaat
    17461 ttgtcgaagt atggctcatc taatggattc aattgcaagt tttcaatttg caacgttgaa
    17521 tgtgcaatgc catatttttc tttcaacaat gatgatactt gatcaatcgc ttgataatca
    17581 tcaccctcat attttttatc taacacaaca tgggcactta atgaataatg ctctgttgta
    17641 atactccaca aatgaaattc atgtacatct aatatgccat ctatgttttt aatatctgcc
    17701 ataatttgat cagtatccaa atgttgaggc acactttcca ttaaaattaa ccacgcatta
    17761 cgcgtaattt tataaccacc acgtaaaatg atgagtgaaa ttacaatact aatgattggg
    17821 tcgatgatgc gccatcctgt aaagtaaatc aatacaactg caacgatgac accaatagag
    17881 ttcaataagt ctcccatgaa atgccataat gcactttgaa tattgatatt gtcttcttgt
    17941 tttaaagacc ttacaaggat aacagtcaaa ataatattga cgagtaaacc aatactagca
    18001 atcataaaca taatgccact ttcaattggt tgcggataaa taatacgtac aatagcttca
    18061 tataaaatcc agattgaaat tacaattaat gctaaaccat ttaaaaatgc agctaatatc
    18121 tcaaatctta aatatccaaa tgtgtatcgt gcagtcggct ttttacttgc aaaataaatg
    18181 gccaacatag ataaaccaag tgctaataca tcactaagca tatgaaatga atctgacagt
    18241 aatgccaatg aattagatac taaacctccg acaaattcaa tcactgtaaa taacaatgtg
    18301 atgattagtg atgcccacag cgtcttttta gaactttgtt gaattttttg atgattgaca
    18361 tgatgaaaat atttgtatct gtttatcgta ttcgcctttt tcccattcat acgtttgcca
    18421 ctcctaaata aatgcgtcgt atttaatatt gtcgctttta aaaataattc tttatagctt
    18481 ctcaggttaa tattaatgct tccgtaatta accatgattt atacatcatc gtcatttaca
    18541 tgacaactca ttaatcttta ccctttatag ctttatgtaa tatcaccttg tgtaatatca
    18601 ccttggaaaa cttttacagc acactcgcgc tttgctttat tcctatcata tagaaaattt
    18661 taataatgta cgagattatt gtgttagtta cataaaaatg acaaaaaagt atctcaaatt
    18721 tattgtttag tttcattaag ttcaaaaaat cgcaataact ttaatgattg ttccgcatat
    18781 taaaacaaac gatgactttg catattgaac ttcatatttc taaatcacca taattaataa
    18841 acaactctgt ccttataata gccgcatcgc aaattagcat aattaaaaac agcagtaaga
    18901 tgatttgcaa ttaaaaacca tcctactgct attattttag tcattatatc ctaatatcat
    18961 gatacgtgtt cctatatatt ttgttttgct taaaatctaa acaacgccgt taaatgttaa
    19021 gacttaccgc tagactgacc tacaaacacg cttcagaaac gatatttatt ctagtacaaa
    19081 ccttttaaag cattgcttgt atcaatataa atatttttaa cttgttgata gttacttaac
    19141 gcacctttat aagtttctcg accgatacct gattttttat aaccaccaaa tggtgcgcct
    19201 tctggtactt ggttgtaagt gttaatccaa atacgtcctg tacgtacagc tttagcaata
    19261 tttaatgcac gtgtgatatt ttgagaaaat acaccgcctg ctaaaccata ctcagaatca
    19321 ttagctatat caattgcttc ttgatcgtcc ttcactttaa tcactgttaa cactggtcca
    19381 aatatttctt cttgtgctaa tttgtgatga ttgtctggca cagcaattaa tgtcggctca
    19441 aagaagaacc ctttatctaa tccattttca gttaagcgat gaccgcctgc taaaatttgt
    19501 gcatctgatt cttttgctgc atcaatatat gattgaattt tatctaattg atccttacca
    19561 gtttgactac ccatttgtgt agcttcatct tgtggatttc caactttaat atttgaaaat
    19621 gcctcttgta aacgtggcac caattgatca taaatttttt catgaactaa taatcgagaa
    19681 cctgcactac atacttcacc ttggttgaat aaaataccta actgaatacc ttcaactgca
    19741 aggtctaaat tagcatcatc taatatgata ttggcgcttt taccaccaag ctctaatgta
    19801 gcgggtacta gatgttttgc tgcagcttcg gcaacttgat aacctacatc agttgagccc
    19861 gtaaatgata atttatctac accatcatga ttgaaaattg cattacctga ttctgaacct
    19921 ttacccgtta gtatattgac aacaccttta ggtaatacct cttggaaaat tttagcaact
    19981 tccaataaac ttaatggtgt tgaagacgaa ggttgaatca caattgtatt acctgcagca
    20041 atggctggcg caatcttcca tgcagctaat agcattggga agttccaagc aacaacagca
    20101 cctacgacgc caatcggctc atgtcgtacg atactcattg tgtctttatc gatatcattc
    20161 actgtacctt cttctgtttc aataacactt gcgaaataat ggaaatgtct tgcagcaaat
    20221 ggaatatcaa ttgctgttgt ctcacgaatc ggtttaccat tatttaatgt ttcaatcatt
    20281 gcaattttat ctttttgtgc cattaattta tcaccaatat cacgcaacat ttgtgcacgt
    20341 tctgatttag aagttaatga ccatgattca aatgcctctt gcgccacttt gactgcatga
    20401 tcgacatctt tatcttttgc tcttgtaata tgtgatagtg tttctccagt tgctggatta
    20461 gtcacttcga ttgtttcgtc actgctacct ttaacaaatt ccccattgat aaataaacca
    20521 taattctctg caatataatc tcgaacgttt actgccatat tatctctcct ttgtttattg
    20581 gctataatat aaatctctta gcatcatatt taataatgct tttaaacgat atgattcaca
    20641 ttatatagta agcgtttaca ttttataaaa taatcagctc acagaagtct catttttaaa
    20701 acttttgcgt cgtttttgca cataaaaata atcttatttt cgaaaacata ttgcactttt
    20761 caaaaataaa acacataata taactataat acttgagaat aattctcatt aaatagtttg
    20821 gttgttatga aagtcgcgct taaaatgcgt taatgtgaca aggataattc aacatcgttt
    20881 cattttactg agtcattgca cttatcatac acattatatt tagcatgagt tatattacta
    20941 aaacaatatt acatgcgcat tagtactaga atggagtttt ttcaatgcga cttattttaa
    21001 tcgtcattgg cttaatattt acagcgcttg gtattgcagg tgccgtatta cctttactgc
    21061 caacgacccc ttttttactc gtagcagttt tttgttttgc tcgaagttca gatcgctttt
    21121 acaattggct tattaatcaa aaaatttata aagaatatgt agaaaacttt tatttacatc
    21181 gaggctacac gctacaacag aaaattaaaa ttttaattag cttatacatt gtaataggtt
    21241 tttcaattta tatggtggat gttcttgcag tccgtgtagg attaatcata atggttatca
    21301 tacaaaccgc tgtactcttt acatttgtaa aaacattacc caaatcaaat cataaaatag
    21361 aggagtgatt gcccatgttt atggcagaaa atagattaca attacaaaaa ggcagtgcgg
    21421 aagaaacgat tgaacgtttt tacaatagac aaggtattga aactattgaa ggcttccaac
    21481 aaatgtttgt cactaaaaca ttaaataccg aggatacaga cgaagttaaa atcttaacta
    21541 tttgggaatc tgaagatagc tttaataatt ggttgaattc cgatgtattt aaagaagctc
    21601 ataaaaatgt acgtttaaaa agtgatgacg atggacagca aagtccaata ttatcaaata
    21661 aagtattcaa atatgatatt ggctaccact atcaaaaata aatatattaa aaacccctag
    21721 tcaccgctgg ttgtctaaac caacttcatg attaggggtt ttttattatt tgtgacgtaa
    21781 aggtacgaat tcatccggct tgtctgtgcg caatccaaaa taatattcta ttgcttcaca
    21841 aatacgtcgt gatgcttgtc catcaccata tggattattc gcttgactca tacgttgata
    21901 cgcttcatca tcctcaatca attgtttcac atttcgaaca atattgtcat aatctgtgcc
    21961 aattactctc gatgttcccg cctcaacgcc ttcgggacgc tctgtatgat tccttaatac
    22021 caacacaggt tttccaaatg taggagcctc ctcttgaata ccaccagaat ctgtcagcac
    22081 gaggtacgat tgatttgtaa aattatggaa ctcaatcgca tctaatggct caattaattc
    22141 aatccgattg ctcccagata aatatttttc ggcaatcgct cttacctttg gattacgatg
    22201 cattggataa atgaagacaa catctttata ttcatctgcc aaatctctta ctgctttaaa
    22261 aatctgatgc atcggttccc caatattttc acgacgatgc gctgttagta aaacaacttt
    22321 cttgccttta tgtttattaa taatcgttga aacaaaatca ttttgaactg ttgttgacaa
    22381 tgcgtcaata actgtatttc cagtaataaa gatacgctct ttgtctttgt tttcaaaaag
    22441 taaattttta gctgcaatta ctgttggcgc aaaattcaat tcagcaatat tacttaccat
    22501 gactcgattt aactcttcag gaaatggtga gtatttctga tgtgttcgaa gtccagcttc
    22561 tacatgtccg accggaattt gatgataaaa tgctgccaaa cttcctacaa aagtcgttgt
    22621 agtatcacca tgtactaaaa tcatatccgg ttgttcctca ttaatgatgc tatcaagttt
    22681 agcaagtgca ttcgccgtaa ggcctgctaa tgtttgttga tcttgcataa tatttaaatc
    22741 atgatcagct tgaatatcaa atatacttaa cacactatct aacatatctc tatgttgtgc
    22801 tgtaatcaca atgttcgctt caaagttccc attatgatca atttctttta ctaatggtgc
    22861 catttttatt gcttcgggtc tcgtaccgaa aataaccata atttttttca taacattatc
    22921 ctctctgaag ttcaaacaca tgacagctta tctttcctta atcatgtatg ccctagtttg
    22981 acacatttta tttgtcgata aaattaaata tattgccata attataatac gatacatctt
    23041 caaatgatga tttcacaaca ttttttgtat caaaaatcac tttatgcttc attttatcaa
    23101 aatgactgtc cgataaattt ttaaattctg agtggtcact taaaatcaat actagcgatg
    23161 cgtctttgac agcatgtgac atatcatgtt ccacaaaatc taattcaaca tgtggatcat
    23221 aagcacatac ttctatgtct ggttcttgat ttaatagctc ataaatatca aatgctggtg
    23281 attctcttat atcatcaaca tcacctttat aagttaaacc aaatactgtg actttattcc
    23341 cgctcaacac tttgatgatt tgcttcgttg tatcaacaac ataggccggc attgaattat
    23401 taatttcacg tccagtttga attaactttg cattttcagg gtctttagca ataataaagt
    23461 acggatcaac agctaaacaa tgaccgccta cacctggacc aggctgatgg atgttaacac
    23521 gcggatgttt gtttgccatt tcaatcacat ctaatacatt aatatttaag ttattgcaaa
    23581 tttttgttaa ttcattagct aaagcaatgt tcacgtctct atatgtgttt tccattagct
    23641 tactcatttc agcagtacgt gcatctgttt caatcatttc tccctgaacg aatgtgcgat
    23701 agacacgttt acccgcttca atacaagctt cagtcacacc gccaatgata cgattgttat
    23761 gaactaattc ttctaaaatt tttcctggca gtacacgttc tggacaatgc actaaataaa
    23821 tatcttcacc tattgtaaac cctaaatttt caatgactgg ttttacaaaa tcatccatcg
    23881 ttttaggcgc aattgtcgac tctacaataa tggtatttcc tttttctaaa aatgataaaa
    23941 tactatctaa tgcacgcata actagcgaaa tgtcacatga ccggtactga tcatcattat
    24001 tcggcgtcgg aacggcaatg ataaaaacat cagatgcatc tggcgttgta gataccttca
    24061 attttcccga tgacagtacc tcttcataaa cctcttgtaa tccaggttct tcaatactaa
    24121 tttgaccact ttgtaactta tcaatcgttt gctgattaat atcaacacca agcacatcga
    24181 cgccatgttt tgcaaacata attgatgttg gtaaaccaat ataacctaag ccaactactg
    24241 ttaacttcat actataacct ccaaataaaa cgatttgtat gttgatttta tttaatagat
    24301 gacttatgcc ttatctttgg ttgtcgtttc atccatgatg tccgcaataa caagtgacat
    24361 ttttccagga ataatttcaa gtgcattatt attttcatat aacgtattgc tgtatattaa
    24421 attgccgaat aattttctaa agaccgacaa cttattaaaa tacttattta gcattgaagg
    24481 catgttgatc aataccgttt tacgatgtga ttggcgacgt atttcataca ttactgacga
    24541 tgtatcaaag taaaaactat cttgaggatg gtacacacct gtcacttcta atgatattaa
    24601 ttgatcaata aatgctgtca gatgtttaat atataatgca ctgcgctgat tgttaatatt
    24661 gggaatgatt ggcaatcgct ttgacaattg cattaaccgt tggaaatttc ctgggcaatg
    24721 tgcaccataa atcattggtg gtctcacaat tgctacttta aacgaatcac taatcaattc
    24781 ttgtaatgct tgttcagcga actttttgga aataccatag ttggtcgtag ggttcattgg
    24841 tgtttgtgta tcaacttgat ctgatttacc aacatgacct tcttttccat aaactgccat
    24901 agtactcata aaaataaatt gtttaacgtc ttcagcttta gccttttgtg ccaattgttt
    24961 cgtcggcaac atattcactt gcatataatc agatagcctt gcttgaggtg aattgttgtg
    25021 aaccaaagct gctgtatgaa ttaaaacatc ataatctttg aacgaggtcg acttccataa
    25081 ttgattccta acattaattt gatctacttg atgtccttgt tcaataagct tatcttttaa
    25141 agcattaccg atatatccat gtacgcctgt aattaaaata ttttttctca ttagtgatgc
    25201 acaccttctg aagtaacgat atttttaatt gttttatata tgatatacat atcaagcatc
    25261 atagattgat gtgttaagta ataatgatca tacgctactt tttgatcatc agtgatatca
    25321 tctctcccca tcacttgagc tagtcctgtc acacctggtc taatcgtatg cacgttcgct
    25381 tttgtacgtt tttcgattaa ttcgtattga ttataaagcg ctggtctagg acctacaatt
    25441 gacatttctc cttttaaaac attcaataat tgtggcaatt catcaataga ggtcttacga
    25501 atgaccttcc ctgtctttgt tatatacgat gttgaatcca ttaaatcagt tgcaacatta
    25561 ggtgtgtcta ttttcattga tctaaactta taaatattaa acaattcatt attaatcgtc
    25621 ggtctttttt gtttgaaaat ggctggtcca ggtgattcca ttttaattag taatgctgta
    25681 attaacagaa tcggacttaa aactactaaa ccatatattg aactcactac atcgaataat
    25741 cgcttcataa ttatctcctc acttcaacag attgtaatac ttcatagtat taatttctct
    25801 cgtatattta tctttaaaca gttgatgtgc gcgctcaccc atctcgtgca attccttact
    25861 cgagtgagtg ttgatgaagt tataaatggc atgtgcatcg ccattatcaa tttggatacc
    25921 cgcatcatat tgttcaacat gttgaacgat atcagattgc ttatccatga tgagtaccaa
    25981 cgctttctta gctgcaagat agccataatt cttgctcggc acgcctaaac cgacgccttc
    26041 tttaatcagc gatgcaatac atacatccgc aatttttaat acgtcagcat agtctgtacc
    26101 tgttaaaaac tcaaacattt taacattttc aatacgatgg tcttctattg ccgttttgac
    26161 atctgcaaat ttcttaccat gaccacaaag tattgttaac gtttgagact gatccttatt
    26221 taattttaaa aatgagataa gtgtctccat atcctgtaac tgccccatat taccgctata
    26281 caataaaatt ttgtcgtatt gctcacggta agctttaaat gtgtcattat agatacgatt
    26341 gtcttgtaat tgacgcatgt cataccagtt aggaatcaca tggatattgt cagcattttt
    26401 agaaatttga tgatttagta agtagttttt catttccgta ccaaggacaa tgacattttc
    26461 agcattcttg tagacatgtc tattaatgta acgcatcagc ttatcaatca tgctacctgg
    26521 acgagttgca cctgtcttaa tcgcattatc aggtgctata tcatacacca caaaagaata
    26581 ttttttctta agcagtctgt gtaaaacgtc tggtattaat ggcaagattg gtggattaga
    26641 gtaaacaaga atctgatcat atttcaacat tttaggtata ttaatcacga attttgaaaa
    26701 taaactaaag aaattgatga tccttccaac cttacttttg ttattaaacc tcgaatactt
    26761 gagacgtcga atgcgaatac cacgatgcat ctcggtttta gaaacctgtt tatgattact
    26821 atattcatat ggccatccac acatgacatc gacattaatg tgattcgcaa ttaaatcttc
    26881 cgccaattga gttggtaacg tcgcagaaga tacatattcc ggataaaaat actgacataa
    26941 aatcaaaatc tttttttcac tcatctaatc gacgtccttt ttattaatga atttagactt
    27001 taaacctata atatttaaaa tcacatactt aataatgttg ctgaacagcg ttgtccaaaa
    27061 gaatccattt agaccaaacg caattgtcat taaaatagtt atgaatataa atgtaatcgt
    27121 gtgaagcgtc atataattcg cttgtaatgt tattgatgcg tgttttgtat ttaaagtttg
    27181 gatcataata ctcactgcat tgaataaaac acctatatta cctaaaataa taaacttcga
    27241 atataaactt gaatcaatgt tatacagtaa agagacaata attattgtaa ttggataaca
    27301 tataatcatg actaaacata gggcagctat agcaattaga ttagttttca aatattgctt
    27361 ctttatattg tcactttcat ttacagaaat atatgaaagt actacattat taatcggata
    27421 tagaaatgta gctaacattt tcccaataaa tgttgaaaga aatgatatag ttacagctgt
    27481 tccacctata attggtaata agattaatct atctaaatag agattcaaat tattaaggct
    27541 atttgtactc agtagcatca cataatcttt taccacatta ttatcttcac tttgatactc
    27601 gcctatagtt aatccccgta atttaaccaa tgtatatatc gttgcaaaca attcactggt
    27661 aataaaacaa acaatccagt tttgggttaa ataatataga aatagtccta tcagcaaacc
    27721 taaaaattga ataagagcaa tatacaaaat ctgattatat tttaaagtca tcctaaaaaa
    27781 tacattcaga taaatcctta aacacattaa aatattaagt agaattaaaa agataatatc
    27841 gatgatgttc aaattaaaaa agtaaagaaa tacaataatt aaagctatac tctcaatcag
    27901 aattgagatt aaaagtatcg atgcaaattt ccagtagtaa tgattggatt tgtatagatt
    27961 catattaatc aatcgtatat tgttaagcgt attgcctaat acaacactcg tgattgttat
    28021 tattgtataa atcgttaaaa tagaaccgaa cgcttcatta cctactcgtt gattaataat
    28081 tggataagct aaaaattgta atcctaaagc tataagcaac gtaccaatta ttgtctttac
    28141 gctatccata ataaaaactt tcttagccat gatgacgccg tccttttgta ataaaataga
    28201 acaacacaaa ccaaaattca cttacaacta aataatttga actaaacatt aataatgtga
    28261 ttggatagat tgctataaac ataacgagta aatctatagt gtttggatca tagttcctaa
    28321 tcattttata aactagtagc aaaatgcaaa tcattatgat aaaaaaccct aataagccaa
    28381 atgatagaat caactcaata atgatgttat gtggtatatt tccgattagt ttataatagt
    28441 taaatggccc atagcctaat aacgaacttt gttgaataaa gtaaatacct ttttcataaa
    28501 tcggtcctct tccagaagta ccttctaaat taagtgttcc accttgtaga tatgaaaatg
    28561 ttctagtatt cgaacctttt gtaaaaagaa agtaaatcaa tacactagat atgcttaatg
    28621 caaaaatata cataatgctt tttactgcga taggtattcc tcttttaaac gtaataagta
    28681 taaatgcaaa taagccgtaa agaattaata aaatagcacc tccacgccct cctggtataa
    28741 acacaatagg gatatcaatt attgtaaata gaacatatat ccacttatgt ttaactgaac
    28801 ctttcataat gaaataaatg cctaatccgg cagtaaatgc tgaaaggtac gaagcgtttt
    28861 gatagttcat aagtccaaaa ttgatatagc taggtatctc acctgtaagt tttggtatta
    28921 aaattacaaa aataaatgaa acagaaaata tgaaaaatac taatttaaaa aatctttcta
    28981 ccgtagcctt gtttatatat ttaatataaa taccactaat tgccgctgga actgcccatg
    29041 ttaaaaagaa tagaatatta tttttagcta gtttctcttc cttatctggt gaaaaataat
    29101 aaaaagctag ataaagcaaa catatagcaa ttaataatat taaccctcgc ggaatttctt
    29161 gggtgacaat tatcttataa atagcaaaca ccgtagtaat taatgctata ccaaccatgg
    29221 ttgagtaata caccggctct atagggaacc ctaatacttc tttagtaaat gtagagatta
    29281 ctataaatat gttcatgctg ataattgcac aaagtacaaa aaatttcata gtctacctct
    29341 ctttaaaatt tatataattc tactaaccgt tcactctcta tttgccaatt caaaatttta
    29401 gacgccttaa ttgcattttg acgtaaatga ttaaacaaat cgtgattatc tcttaatttt
    29461 ctaaccgcct tttcaatttc taacggcgta acttccttta gaacaatgcc aaatttatat
    29521 ttttcattga gataaatatg ctctttgaca ggagataaaa ttactggtaa accagcatgt
    29581 atacattcaa aaattttatt agatactgta tattcaaaat taatagatac tggtttcgtc
    29641 aagacaacac caacattact ttctgctaac ttatcaacca attcttttac ttcaactggt
    29701 ttatccaacc taatattttc cgggttataa ctaatcagtt cttttatcac ttcttcatgc
    29761 ggaccaaacc ctcgaattat gaatgaagga gcattttgtt taaaagctga tgaagcaata
    29821 ataaactctt catatcctct gtccattaca atttgacctt gatatacaat ttctttaaag
    29881 ttttcgattt ctttaaattc tctgctatca tttaaaatag gtgcattcgt aataacattc
    29941 gcttccttct tatatccttt agattgataa tattcttttg ctgcatgact tactgttacg
    30001 aaggcattaa cacgatgttt tactatgtgt ttttctatac tttctacaaa ctttgaaata
    30061 agtggaactt tattaataaa ggcatttttc gcatatattt catgcgcatc ataaacaata
    30121 ttagcttttt tataattgct taaatagacc attaataata cgtcgaaatc atttgcatga
    30181 atcacgtcag gtttataagc tttaatttct cggataacac ctgttgcaaa tcttatacgc
    30241 ttaattaatt tagaaagaat attttttgga tctaccttgc tacctaacaa acgataatta
    30301 caatctaaat tttccaatcg cttattagta gcttgtgaat tattcattcc aacaatttta
    30361 taatcatccg taacgccttt aattgtttct atttgtttaa gtacccttgg gtcttgaaca
    30421 atattactcg atacaatatt taaaattctc atatcattaa gtatcctttt tatttaaata
    30481 ttcaaccgaa aatcctttta gtttgtcagg cgttttctcc caccacttgc tttccaaaag
    30541 tttttcaatt gttttattgt caaatcgctt cttaatcact tttgcaggaa caccaccaac
    30601 aacctcatat gctcctacat ttttagtaac aactgagccg gctgctatga ctgcaccagt
    30661 atttattgtt aaaccatcca taataattac atttgcacca atccacacat catttttaat
    30721 tgttgtacgg cttggttggt cattaaagtc tataaacttt tgctttatgt taaatggatt
    30781 attattagaa taaaaaatcg gtgatgagct aaaaaagtgt gtaggatgtt ttcctaaccc
    30841 aatttttaca tccgaagata tcgaacaata tcttcctact tctacattat taaaatcact
    30901 accaaatcca atataactgt attcaccaat gtgagaattc ctgattttac accatctatc
    30961 tatatagtta ttgccatcaa attttgagtt tgtaatatac gccaagcgat gaatcttaac
    31021 attcgattct ttagaggact ggtttttcag caaaccaatt atcttttcaa tcgctatcct
    31081 catcgtcatt tcctccaagt atttcgattg ataatatctt tatagctttg aataatttta
    31141 actacctttg tcgaaacgtt agtgtcttta taatcaatag catcaatcat cggttcgtta
    31201 ttgttttgca tctctcttgc tagttcaacg gattggatta gattgttata ggtaatacca
    31261 cctacaataa ccgtaccttt atctagtact tccggtcttt ctgtggaagt tcgaataagg
    31321 acaccaggga acttcaaaat agacgactct tctgacaatg ttccactatc tgatagcaca
    31381 acaaatgcat ctttttgcaa tgcattataa tcaaagaaac caaatggctt taactgttta
    31441 actaatggat caaattcaaa tttactttct tcaattttct tccaacttct tggatgcgtt
    31501 gaataaatca caggcatttt atactttttg gcaatatcat ttatcgcatt cattaatgat
    31561 ttaaaattct tttcattatc gatattctct tctctatgcg cagatactaa aatgtattgt
    31621 tgcggttcta atcctagttt atttaaaacg tcactgtgat taattttatc tcgatgcgct
    31681 tctatcactt ctgtcatcgg tgatcctgtc acaaagatat tcgctttatt gaagccttca
    31741 tctaataaat aacgtctgct atgttccgta taaggtagat tcacatcact gacatggtca
    31801 acaattttac gattgatttc ttcaggtaca ttctgatcaa agcatctatt acccgcttcc
    31861 atgtggaaca caggaatctt taatcgttta gcagatactg ctgctaaaca actatttgta
    31921 tcaccaagaa ttaaaagtgc atctggttgt tcgcgtaata aaacatcata tgtcttcgca
    31981 ataatattcc ccatcgtttc tccaaggtta cttccaactg cctctaagta gtggtccggt
    32041 tgtcttaatt ccaaatcatc aaagaaaatt tgattcaatg tataatcata attttgacca
    32101 gtgtgtacta atatctgatt aaaatattga tcacatgctt taatcgttga tgataaacga
    32161 atgatttcag gccttgtacc aactattgtc attaatttca gtttttccat gcgctatacc
    32221 tccaagaaat acgtatctgg ctgatttgga tcaaacattt cattcaccca cataatagtt
    32281 accatatctg tgtcgcctaa attttcaata ttatgtgtgt atcctactgg tatgtctaca
    32341 acttctaatt tgtcgccaga aacataatat tcaatgattt catcatcatt aacatgtcta
    32401 aaacgaatta cccctttacc tgatacgact agaaattttt cgtttttagt atgatgccag
    32461 tgattacctt tagtaatacc tggtttagaa atatttacag aaacttgacc acgatccggt
    32521 gtttttataa attctgtaaa agaaccccta tcatccacat tcataagtaa gggataacta
    32581 aagtctgtac taggtagata gcttaaatac gtactataca aatctttttc aaacaagtta
    32641 tctaatttcg gcaatgttcg atcgagacgt gactgtttga acttgtataa taaatctaca
    32701 atttctccca atgtcacttt aaatacgttt ggtactgtag gtacaccatt ttcaatcgtt
    32761 ggagttcctt caatagcacg ctttatttca gcgacgatat catccacgta gtttagcgtt
    32821 agttcaacat tccgatcatt aacttgaatc tcttcgttac gtgcaatttt gtaacaaaat
    32881 gttgctatca ctgagttata attcggctta caccacttgc cgaataaatt tggccagcga
    32941 taaatataaa ccgtattgcc atactcttcg gcatactctc ttaatagctg ttccccttgc
    33001 aacttactct caccataagg attatcttgt gttgcttgta ttgaagacga taataatatc
    33061 gctggctttt tcgtatttct agttaatata tcaagtacat gatctaaata actcacgttt
    33121 cctaagctga attctttgtc atgttcaggt cgattaacac ccgctaaatg cacgacaaag
    33181 tctgctttca acaatgctga ctctaattct tcctctttag tttgtcgatg tacttcgaaa
    33241 atatgatgat ctgtcgttga agttaaatct gctttcaagt tttttcctac aaaacctttt
    33301 gctcctgtaa ttacaatatt caacgtcaat ctctcctatc tcattgaagc tttataatca
    33361 ttcaattcgt ttctaacata ttctagtgtt aaaagttttt cttttatctc ttccaccgtt
    33421 aaaatatgtg tattatcgga gttatattca taagattgcg taatcttttc gttaccggtt
    33481 tcaacataat tactataatt taaatctctg gagtctgccg gcactctaaa ataatcaccc
    33541 atatcttcac attgtgcgta ttcttctctc gtcaacaatg tttctgcttt tttctctcca
    33601 tgtcgcgtac caatgatttc aattgcatta tcagcttcaa acaattctaa taatgcggtc
    33661 gcaagatccc ctaccgttga gcttggtgct ttttgaacca taatatctcc tgtctctgca
    33721 tgcttaaatg catgaacaac tagttctacc gcatcttcta agctcattaa aaatcttgtc
    33781 atatcaggat ctgtaatcgt taaaggttct ccagctttga ttttgtcgat aaacaaaggt
    33841 attactgatc ctcttgaagc catcacatta ccgtatcttg taccacaaat aagcgtttgt
    33901 tcactacgaa tatttcttga tttggctacg aatacttttt ccatcattgc ttttgaaata
    33961 cccatagcat taataggata cgctgcctta tctgtagata aacatatgac ttttttaaca
    34021 ttttgatgaa tagcactttg taagacattt tctgtaccaa taatatttgt cttcactgcc
    34081 tcaactggaa agaattcaca tgacggcact tgttttaaag ctgctgcatg gaatacgtaa
    34141 tcaacatctc gcattgctgt ttctacactt tgactatcac gcacatcacc aatgtagaac
    34201 tttaattttg aattattata tttttttcga atgtcatctt gttttttctc atcgcgtgaa
    34261 aaaatacgaa tttctttaat attagaatct aaaaactgtt tcataacagc attaccgaat
    34321 gatcctgtgc ccccagtaat taataaaatt ttgtcatcga acataattat ctcccttttt
    34381 gccattggca tagttaataa ttttttcttt actaaagtca ttgacgatgt cttgaataat
    34441 cgcttcaact tcattacatt tcatatgttg tactttgcca caataaattt tttcaaatac
    34501 ttgttcagga tgaacctcat ctttattcat aagctcttca aacatttttt cgccgggtct
    34561 aatccctgta taagtaatgc gtatgtcgtc ttctttttta ccacttagct taattaaatt
    34621 acgtgccaaa tctacaattt tcactggttc tcccatatct agcacaaata cttcgccacc
    34681 ttctgctaat gcccctgcct gcaaaactag tctagaagct tcaggaattg tcataaagta
    34741 acgtgtcatt tcaggatgtg tcacagtaac tggcccacct tcttcaattt gacttttgaa
    34801 aagtggaatc acagatcctc tcgatccaag tacattacca aatctcactg caacaaaatt
    34861 tgttcgatgc gtttcatcat ttaaactttg aataatcatt tctgcaattc gctttgaagc
    34921 tcccatgaca ttaggcggat taacggcttt atccgtagaa atcataacga atttctttac
    34981 ctctgcattt ttagcagctt cagcagtatt tttcgtacct aaaatattat tacgtactgc
    35041 ttcttcaggg ttgtcttcca ttaacggcac gtgcttgtgt gctgctgcat gataaactgc
    35101 gtatggttta tacgtttcca taatttcaaa catacgcgct ctattttgca catccgctat
    35161 aataggaacg atatcaacat tttttccgaa gcgatttcgc aattcacgat tgattaaata
    35221 aatactgttt tcaccatggc caagtagaat aatacgttct ggatagaaat tacaaacttg
    35281 tctacaaatt tctgatccta ttgaaccacc tgcacccgta actaaaatag ttttattcgt
    35341 caattcattt gatatcatat ccatatctaa ttcaacagga tctctgccta gtaaatcttc
    35401 tacttcaact tttttaagtt ggttcacttc taactcacca gacatgacgt cttctatatt
    35461 tggcattttc aataactcaa cgccatccat atggcaaata ttattaattt ctttcaaacg
    35521 ctcttgacca atagttggaa ttgcaatgat gattttttta atcttatatt tcctcactag
    35581 ttctggaata tccgcaattt taccttggac ttttacaccc tcagtaattg tgatattgcg
    35641 tttatgttcg tcatcatcga ctgctaatac cggttcaagt ttcatttcgt cacttttcaa
    35701 catttgtcta atcagcattg aacctgcttg accagcacca acaactaaag ttggcttctt
    35761 attaaatgac ttacctccaa ggtatttccg ataaatacgc caaaataacc ttgagccacc
    35821 tattaaaatc aagtgcatca tccaagtaat taaatacaat ctaaaaaacg gtctattgcc
    35881 tgtaacaatt gtcacgacca ccatcgtaat aacgatagat gtcgtcacag ctttaacaat
    35941 taaaatcaat tcactcacac tggcatattc ccacgctcga tgatacatat taaaaataaa
    36001 tgctgaaata tgatgcgata tgaatagtga tatagctgcc aatattaata atttgacaga
    36061 atatgttttg aaatacggtt ctaaaatgta ataacttacg aatactgaaa atgtcactat
    36121 cagtgaatcg attaatgcta gtattaaaag ccgcaatttc acagataaat gtgccataaa
    36181 acccctcatt tgctgtttat aacccaaacc atcttttctg tttataatct tgttgtggca
    36241 ttcgtttagg aattttttta tcatcaacaa ctaacttcgc attactaata aatccgttca
    36301 tatcttcata ataatcacgt aatttcttat cattaaataa gtctttcatt aagaacggtc
    36361 tgatttctgt gttatgcgca tctgaaccga tgaaatgtgt cagattgttt tcaatcattt
    36421 gaattgctaa ttttctaatt tttttaccgg aaatacccgc taatgacgcc gttgtcactt
    36481 gacttaaagc acctttgtta attaaatcgt atagtatgtc aaggttttga cttattgctt
    36541 tattccgctc tggatgtgca ataatcggta caaagccttt actctgtaat tcgaaaaata
    36601 attgatcagt atagtgtgga acttcatttg atggaaattc tattagtaaa tagcgtgaat
    36661 cattaatacc gttaataact tttcgatcaa tatcattaag gatttgatcg gtaattctta
    36721 tttcctgacc ataataaaac tttagattta gtgcttgtac ttcctctaag ctttcaatat
    36781 ggtttaaaca tgatttcact ttttctatag gtgtggtata tcgaggatgt aagtgatgtg
    36841 atgttacaat gatttctgta acaccttgtg ttgtcgcttg ttttaaaaga tccatcatct
    36901 ctgtttcatt tgtcggaccg tcatcgatat taggcaatat atggttatga atatcaatca
    36961 tacttattca tctccataat agtgataata actagaagat ttatcgacct ttgtcttgtt
    37021 caaaatgaca cctagaatgt tactgcctgc tttttccata agtgcttttg cttttttaac
    37081 ttcattttta tcattttttt cactatcaat tactaacaga ctatctttaa tagcacgcgc
    37141 atatagttgt gcatcagtca cagtattaac tggcggtgta tcgacaataa taatgtcgta
    37201 acgtttatta aacagatcaa ctaattcttt gaacctttca gacccaatta actcagatgg
    37261 atttggaggt acagggccag ctgttagcaa atctaaattt tcaatttctg tcgacgtaat
    37321 tgcttctgac atagtcgttc gaccaatgat taagcttgat agtccattat tattttgctc
    37381 attaaaaata tagttttgtg ttggcttacg catatcgcca tcaataacta atgtcttata
    37441 gcctgcttgt gcataagtaa tcgctacatt cgatacaact gtacttttac ctgcaccagg
    37501 cttttcagaa gtaaccaata agcgctttac ttcaccattt gcttttgaaa acatgatgtt
    37561 tgaacgtata cctcgaaact tttcactaat tgttgatttt ggtttttcat atacaaatag
    37621 tgttgttgtc gtattttcct tttttgacat aagtagcaac catccttaat taaatttttg
    37681 aattgaaccc aatacaggca atcctaattc tttctctaca tcttcttcat ctttaattcg
    37741 cttatcgaaa attactttga agaagatata tataagcgcg acaactaatc ctaaaaagaa
    37801 tgcaccgatt agattcacta cagtttttgg tgcgacttta actgctgtac cgtctgcttt
    37861 agataaaatt gatacgttat ccacactcat aatcttcgga atttgtttac ttgtaacttt
    37921 agcgaagcta ttcgcaattt tttccgaatc ttgtttatga ccacttttaa cttggatgtt
    37981 gataagttgc gtattttctt ggtttgtaat tgtcaacata ctcgacaatt tagatggtga
    38041 atacttatca tttaagtcct ttgacacctc atctaaaatt ctaggacttt taacaatttc
    38101 tttatacgta tttacaagtt gaatattact ttgaacctct tgcgccataa actgaggatt
    38161 gtcaccctta gtttgattca ctaaaatttg agtat
//
LOCUS       DALPQQ010000012        37122 bp    DNA     linear   BCT 22-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus strain K18-6-464
            SAMD00233528-rid16434743.denovo.012, whole genome shotgun sequence.
ACCESSION   DALPQQ010000012 DALPQQ010000000
VERSION     DALPQQ010000012.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMD00233528
            Sequence Read Archive: DRR236061
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 37122)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 37122)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001543423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001543423.1
            Genome Coverage       :: 77x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/22/2022 17:09:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,811
            CDSs (total)                      :: 2,743
            Genes (coding)                    :: 2,689
            CDSs (with protein)               :: 2,689
            Genes (RNA)                       :: 68
            rRNAs                             :: 2, 4, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 4, 2 (16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 54
            CDSs (without protein)            :: 54
            Pseudo Genes (ambiguous residues) :: 0 of 54
            Pseudo Genes (frameshifted)       :: 27 of 54
            Pseudo Genes (incomplete)         :: 27 of 54
            Pseudo Genes (internal stop)      :: 10 of 54
            Pseudo Genes (multiple problems)  :: 10 of 54
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..37122
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMD00233528-rid16434743.denovo.012"
                     /strain="K18-6-464"
                     /db_xref="taxon:1280"
                     /geo_loc_name="Japan: Niigata"
     gene            complement(36..377)
                     /locus_tag="O7798_000492"
     CDS             complement(36..377)
                     /locus_tag="O7798_000492"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500093.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDC2862768.1"
                     /translation="MIKKIFTKKHVFLVIEYENHNHSDAVFGKSILLSIYVGVNKKTN
                     SKSGKFIYLDRSKRIVRQSDITKIESANENDVDFYNLLKKEKEIVYSKNIVDKYNLAN
                     YIIYYEVSTKE"
     gene            complement(383..1315)
                     /locus_tag="O7798_000493"
     CDS             complement(383..1315)
                     /locus_tag="O7798_000493"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500092.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent helicase"
                     /protein_id="HDC2862769.1"
                     /translation="MKKYDIAVLDFETMNEHMNSPCEVAVSLIKDLSIVKVYSSYINP
                     PNNRYNLKNAKIHKIPEDVILKAPKYPDIYQEILYLLKESHLIIAHNALFDISVLKNT
                     NNYYDLPVPNFMYVDSINIFRSFHAISSFKLENLCSLYDIDKEKLHSAKFDVLALSKM
                     LISLAKNNQHYSVLKLIHYMPKQYIRFSKYSNSPTKLFDSGFQKIHMKISEINKIEVE
                     SVIPILKDKNVVFTGNFDTEKQDLMILTRKKGAYIRSDVTAKTDILVEGVQDDKYKDV
                     NGLVSKQRKAREYVGNGAKIQFLNEEDLINLIKE"
     gene            complement(1331..2044)
                     /locus_tag="O7798_000494"
     CDS             complement(1331..2044)
                     /locus_tag="O7798_000494"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500091.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HDC2862770.1"
                     /translation="MNKERNIIIAKNIRKFLNDSNMSQKKLAELINIKPSTLSDYLNL
                     RSNPSHGVIQRIADVFEVGKSDIDTTYKDDNDITSIYNKLTPPRQENVLNYANEQLEE
                     QNSKGDNVVDINSYKQEKTPVNVNGCVSAGVGERLHDETLFTEMVKGPIPTHDLALKV
                     NGDSMEPMFKDGEIIFVEKTHNIKNGQIGIFIIEEEAYVKKVFVEDDRLTLVSLNKDY
                     DDLHFYRNESVRLIGKVIL"
     gene            2007..2180
                     /locus_tag="O7798_000495"
     CDS             2007..2180
                     /locus_tag="O7798_000495"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500090.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator"
                     /protein_id="HDC2862771.1"
                     /translation="MFLAIIIFLSLFILLTSFFLIIRNFHIIVKFFTKKTYLMLTIRK
                     FRIILGLRKAVTT"
     gene            2177..2440
                     /locus_tag="O7798_000496"
     CDS             2177..2440
                     /locus_tag="O7798_000496"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500089.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HDC2862772.1"
                     /translation="MKTLKELRTDYGLTQKELGDLFKVSSRTIQNMEKDSTNIKDSLL
                     SKYMSAFNVKYDDIFLGNEYENFVFTNDKKKSIILAFKEKQTS"
     gene            2456..2671
                     /locus_tag="O7798_000497"
     CDS             2456..2671
                     /locus_tag="O7798_000497"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001025404.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2829 domain-containing protein"
                     /protein_id="HDC2862773.1"
                     /translation="MNIQEATKLAMEKGISIRRENQDVYGILPTNLQRYQCLVVSRHY
                     KKKRQTAAGRWQPSADDLIADDWILDY"
     gene            complement(2660..2989)
                     /locus_tag="O7798_000498"
     CDS             complement(2660..2989)
                     /locus_tag="O7798_000498"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001622080.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDC2862774.1"
                     /translation="MTDEAKFVLLQLYSIYLDRIDEGMSKRSASYFGSDESSFNAFFL
                     GFNFEDYIDAVLELKHRDFVIASAEDGGFLEMALSREGIAYSESESKKDYKTLMGLIR
                     DLKKLII"
     gene            3040..3792
                     /locus_tag="O7798_000499"
     CDS             3040..3792
                     /locus_tag="O7798_000499"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001148641.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage antirepressor KilAC domain-containing
                     protein"
                     /protein_id="HDC2862775.1"
                     /translation="MQALQTKSNIGEMFNIQEKENGEIAISGRELHQALEVKTPYKKW
                     FERMSDYGFEENIDYIVTDIFVHNPLGGRQNQTDHALTLDTAKEIAMIQRSEPGKRAR
                     QYFIQVEKAWNSPEMIMQRALKIANNTINQLETKIERDKPKIVFADAVATTKTSILVG
                     ELAKIIKQNGINIGQRRLFEWLRQNGFLIKRKGVDYNMPTQYSMERELFEIKETSITH
                     SDGHTSISKTPKVTGKGQQYFVNKFLGEKQTS"
     gene            3808..4005
                     /locus_tag="O7798_000500"
     CDS             3808..4005
                     /locus_tag="O7798_000500"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500713.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDC2862776.1"
                     /translation="MQAQNKKVIYYYYDEEGNRRPVNIQYNDGYDLMIDQRFIEMTLE
                     RHPHLKNNFYGLIDGKEFKLD"
     gene            complement(3992..4372)
                     /locus_tag="O7798_000501"
     CDS             complement(3992..4372)
                     /locus_tag="O7798_000501"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000762519.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2513 domain-containing protein"
                     /protein_id="HDC2862777.1"
                     /translation="MKLDHDCVRHLLLEIETNKKIGEPLTEYNFKDNVVFGKYDFETV
                     MYALLKLEEAKYVSVKFGWEDGHIYGYTINDITWSGHEFLDNIRDNHTWKEVKKVANK
                     TTSMSVTLLSKLAFNYLTQKFNLT"
     gene            4427..4750
                     /locus_tag="O7798_000502"
     CDS             4427..4750
                     /locus_tag="O7798_000502"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001806402.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF771 domain-containing protein"
                     /protein_id="HDC2862778.1"
                     /translation="MPHILNVTVPIPETHVLITKDEYEELIAYSLDPVWNMSDLKKKL
                     KIASDETIKDRLLFHPRLEKELRAQGIVHYPDENFNRWRFNARRMHKFVDEHFNEIYK
                     GGHNK"
     gene            4747..4908
                     /locus_tag="O7798_000503"
     CDS             4747..4908
                     /locus_tag="O7798_000503"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500569.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1270 family protein"
                     /protein_id="HDC2862779.1"
                     /translation="MSKTYKSYLVAVLCFTVLAIVLMPFLYFTTAWSIAGFASIATFI
                     FYKEYFYEE"
     gene            5003..5305
                     /locus_tag="O7798_000504"
     CDS             5003..5305
                     /locus_tag="O7798_000504"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000165369.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2482 family protein"
                     /protein_id="HDC2862780.1"
                     /translation="MTKNYKDMTQEEIKDLLSEKTAELYELAKEIKGESKFDILLFSS
                     IGVIDGDYLAGSSSVIGHTFDLAYLLDSTKSYKDIVNVLQMCKSQKILGIDDDKED"
     gene            5310..5570
                     /locus_tag="O7798_000505"
     CDS             5310..5570
                     /locus_tag="O7798_000505"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000291506.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1108 family protein"
                     /protein_id="HDC2862781.1"
                     /translation="MYYKTGDVCRKIFNVDGFDFQLRVKKRAYSVEIVVLDHEGNSID
                     GLLVSDENDLYTALDILKQSIYEWIENNTDEQDRLINLVMKW"
     gene            5579..5842
                     /locus_tag="O7798_000506"
     CDS             5579..5842
                     /locus_tag="O7798_000506"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001638663.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDC2862782.1"
                     /translation="MRDTERNILNIFKTLFDEYTLSNQRALLEIERNHHGYLSINFLH
                     YHDSYKTNNKLVQIHEINPDSHERIKNLIIEVLRGHRKIKKGA"
     gene            5851..7794
                     /locus_tag="O7798_000507"
     CDS             5851..7794
                     /locus_tag="O7798_000507"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000700558.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HDC2862783.1"
                     /translation="MKINKLTISNFAGIKEEKFNFDGKDAKIYGNNATGKTTTATALQ
                     WLLFDKGLDGSTKSFNPVPLNEKNEENYELIPTVFAEFEIDGKITTFKKESHPKYTIN
                     QKTNRKEYSRSRTKKQYINDESIKVKDYKARIDELIDEDVFKLITNPQAFNLLDWKKR
                     RSLLFEIAKPINDEDVIKTNDDFKELNNILGDHEIETKKKILTDKIKQINKDIKDIPI
                     RINQTQQNKQDVPEFDNDRHTIIKQEIEQLENERIDIQNGAEEINLRNQLADKQSELK
                     RIEANNSASNENKIHALTNELHVENGTVANLKTRLKQNKQQITHEENRRNQLLENHKG
                     LKSDLEKAKNQKFEYLDDNVCSCCGQQLPAEQVSEVREKALQKFNANKSKELETIQTS
                     INHIISEGKKIKPIIEKLEDDNNNLQIKINEAEERSARIQNKINKLKTTHVDVTQTDE
                     YKAVMLEINEINQKRSNIRKTIQDKVSGIDDKISELTQEKSEIEVSISIEKSNKHLDD
                     VISELRNEEDRLLDEKEKYSHDLYILKEFTTTKVKMLTENINNEFDIAEFKLFNTLVN
                     GELEETCSTTVNGVEYDSGLNNASRINVGLDIINTLSKHFKVTAPIFIDNAESVTELI
                     KTESQQIQLIVNEQDKKLRMETI"
     gene            7796..8716
                     /locus_tag="O7798_000508"
     CDS             7796..8716
                     /locus_tag="O7798_000508"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000138475.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="recombinase RecT"
                     /protein_id="HDC2862784.1"
                     /translation="MTENNKLQTIEQQLVQEKNVSDNVLNKVRVLESQGNLELPNDYS
                     PSNAMKQAWLQISQDNKLMSCNDTSKANALLDMVTQGLNPAKNQCYFIPYGNKMQLQR
                     SYHGNVMMLKRDAGAQDVVAQVIYKGDTFKQEMGETGRIKAIKHEQDFFNIDKENIIG
                     AYCTIVFNDGRDNYIEVMTIEQIKQAWMQSSMIKDEKALQNSKTHNNFKEEMAKKTVI
                     NRAAKRYINTSTDSNLFKYAQESEQRQRKEVLDAEVEENANQEQLDFEQPVLEEAQYT
                     ELENDKPIDVSDFEEIKEPATEKESEEEPF"
     gene            8797..9414
                     /locus_tag="O7798_000509"
     CDS             8797..9414
                     /locus_tag="O7798_000509"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001169067.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HDC2862785.1"
                     /translation="MKFERVQKHFKYKTRHIAGCLITHEHGDHAKYTKQFVDNGVISY
                     MTAGTQQAMNFESHRLCTIKAKQELRIGTWSILPFDIEHDANEPVAFLLQSTLGYKVL
                     YVTDTKYLKYKFNGITHMMLEVNYIYEQMQENIKNGSVHSTLANRIMESHFSLEHAIG
                     MLKANDLTRLEEIHLIHLSSQNSNAKYIKSEIQKVTGAPVYFGGL"
     gene            9415..9885
                     /gene="ssb"
                     /locus_tag="O7798_000510"
     CDS             9415..9885
                     /gene="ssb"
                     /locus_tag="O7798_000510"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001837429.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="single-stranded DNA-binding protein"
                     /protein_id="HDC2862786.1"
                     /translation="MLNRTILVGRLTRDPELRTTQSGVNVASFTLAVNRTFTNAQGER
                     EADFINIIVFKKQAENVNKYLSKGSLAGVDGRLQTRNYENKEGQRVYVTEVIADSIQF
                     LEPKNSNDTQQDLYQQQVQQTRGQSQYSNNKPVKDNPFANANGPIELNDDDLPF"
     gene            9915..10808
                     /locus_tag="O7798_000511"
     CDS             9915..10808
                     /locus_tag="O7798_000511"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000148321.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DnaD domain-containing protein"
                     /protein_id="HDC2862787.1"
                     /translation="MTGWISIDRSIQNHWLFKEKRTFSKFEAWIYLLMEANHSEAKVP
                     IGNQIVTVERGQRLTSILTLSDLFNWSRFKVKTFLDLLESDGMLEVKTTSKYTLITIV
                     NYDFYQSEQGRNQHQNDIKPTSKQHQSNINPTSKQHQTNTNNNDNKDNNEKNVNNEKK
                     KVTAFDFFQDNGFGFITPYNLDDLNYYLDSFENDSDEMVTASLKIAKDRNKVTWGYAK
                     SILNTWLNANLKSIEQVRAFEKQQLESKKQNYKPFVKQSKEKTPKWLTDSTRETKTPE
                     VDENLEKDREAFIKRLNSKWE"
     gene            10815..11033
                     /locus_tag="O7798_000512"
     CDS             10815..11033
                     /locus_tag="O7798_000512"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000338527.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDC2862788.1"
                     /translation="MDAFDKYYLFDHDGNKMFSVTPHFKDGRHLVVGLKHTKFNGRRW
                     YLDDYELKTLIDNEQMELGHQTSLFEYI"
     gene            11042..11446
                     /locus_tag="O7798_000513"
     CDS             11042..11446
                     /locus_tag="O7798_000513"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000401967.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RusA family crossover junction
                     endodeoxyribonuclease"
                     /protein_id="HDC2862789.1"
                     /translation="MEIEIKFNETFEAPMGSPRPRFSTKGRYAHTYMPTKYTEHKKYL
                     QNQMPKLNLENALKIELEFYFTPPKSWSKKKKTQAIGQLKVTKPDIDNLMKTVLDACN
                     NYLWKDDNQIAEITSSKRYGIEPKIIIRIEEI"
     gene            11459..11827
                     /locus_tag="O7798_000514"
     CDS             11459..11827
                     /locus_tag="O7798_000514"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001607407.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDC2862790.1"
                     /translation="MARKARIVTINDKPYRFTKSEMELIESHGITAGMVSKRVKDGWE
                     LHEAMDAPEGTRLSEYREKKTIERLEQARLERKLERKRKKEAELRRKKPHLFNVPQKH
                     PRGRYACYLMENDIFVKVKK"
     gene            11831..12073
                     /locus_tag="O7798_000515"
     CDS             11831..12073
                     /locus_tag="O7798_000515"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500074.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDC2862791.1"
                     /translation="MTDNARKEYLNQFFGSKRYLYQDNERVAHIHVANGNYYFHGHIV
                     PGWQGVKKTFDTAEELEIYIKQHGLEYEKQKQLTLF"
     gene            12088..12336
                     /locus_tag="O7798_000516"
     CDS             12088..12336
                     /locus_tag="O7798_000516"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500692.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1024 family protein"
                     /protein_id="HDC2862792.1"
                     /translation="MNNREQIEQSVISASAYNGNDTEGLLKEIEDVYKKAQAFDEILK
                     GLPNAMQDALKEDIGLDEAVGIMTGQVVYKYEEAQENE"
     gene            12329..12865
                     /locus_tag="O7798_000517"
     CDS             12329..12865
                     /locus_tag="O7798_000517"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500690.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dUTP diphosphatase"
                     /protein_id="HDC2862793.1"
                     /translation="MNNTLTIDQLQELLQIQKEFDDRIPTLNLRDSKIAYVVEFFEWF
                     NTLETFKNWKKKPGKPLDVQLDELADMLAFGLSIANQVGVSSEEIKEAIESSFKDTEF
                     HKMFNFKDKEFAQDAVVSTPQIIFKEFYPDQQAIVIVIDIAYNLYSIDQLIDAYKKKM
                     KRNHERQDGTADAGKGYV"
     gene            12902..13147
                     /locus_tag="O7798_000518"
     CDS             12902..13147
                     /locus_tag="O7798_000518"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001282077.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDC2862794.1"
                     /translation="MSDMLEIFLIGFGVYLFYRIAIIFLKSKKTIHTNIYEMLMLATI
                     FMISTFAYKHQKTHILIAFLVMFFMSKLKQVQGSYEE"
     gene            13144..13350
                     /locus_tag="O7798_000519"
     CDS             13144..13350
                     /locus_tag="O7798_000519"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500688.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1381 domain-containing protein"
                     /protein_id="HDC2862795.1"
                     /translation="MTQYLVTTFKDSTGRKHTHITKAKSNQRFTVVEAESKEEAKEKY
                     EKQVKRDAVIKVGQLFENIRECGK"
     gene            13347..13733
                     /locus_tag="O7798_000520"
     CDS             13347..13733
                     /locus_tag="O7798_000520"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000592210.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDC2862796.1"
                     /translation="MIKKLKNMDGFDIFIVGILSLFGITALLLVVALPIYTVASYQNK
                     EVHQGTITDKYNKRQDKEDKFYIVLDDKQVIENSDLFFKGKFDSADIQARLKVGDKVK
                     VKTIGYRIHFLNLYPVLYEVKKVDKK"
     gene            13730..13879
                     /locus_tag="O7798_000521"
     CDS             13730..13879
                     /locus_tag="O7798_000521"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500687.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator"
                     /protein_id="HDC2862797.1"
                     /translation="MIKQILRLLFLLAMYELGKYVTEQVYIMMTANDDVEAPSDYVFR
                     AEVSE"
     gene            13879..14079
                     /locus_tag="O7798_000522"
     CDS             13879..14079
                     /locus_tag="O7798_000522"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001557462.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1514 family protein"
                     /protein_id="HDC2862798.1"
                     /translation="MWITMTIVFAILLLVCISINSDRAREIQALRYMNDYLLDEVVKT
                     KGYNGLKEYRIELKRMNNDIKK"
     gene            14107..14523
                     /locus_tag="O7798_000523"
     CDS             14107..14523
                     /locus_tag="O7798_000523"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000590121.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator"
                     /protein_id="HDC2862799.1"
                     /translation="MIKIEKHDIKKLEEYIQHIDNYRRELKMREYELLESHEPDNAGA
                     GKSNLPGNPIERCAIKKFSDNRYNTLRNIVNGVDRLIDESDEDTLELLRFRYWDCPIG
                     CYEWEDIAHYFGTSKTSILRRRNALIDKLAKYIGYV"
     gene            14755..15054
                     /locus_tag="O7798_000524"
     CDS             14755..15054
                     /locus_tag="O7798_000524"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000988331.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HNH endonuclease"
                     /protein_id="HDC2862800.1"
                     /translation="MMTKDERIRFYKSKEWQTTRKRVLERDNYECQQCKRDGKLTTYD
                     KSKRKSLDVDHILSLEHHPEFAHDLNNLETLCIKCHNKKEKRFIKKENKWKDEKW"
     gene            15184..15528
                     /locus_tag="O7798_000525"
     CDS             15184..15528
                     /locus_tag="O7798_000525"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017804894.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDC2862801.1"
                     /translation="MEIIVDENLVLKEKERLQVLYKDIPSNKLKVVDGLIIQAARLRV
                     MLDYMWEDIKEKGDYDLFTQSEKAPPYERERPVAKLFNARDAAYQKIIKQLSDLLPEE
                     KEDTETPSDDYL"
     gene            15525..17186
                     /locus_tag="O7798_000526"
     CDS             15525..17186
                     /locus_tag="O7798_000526"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016187779.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="terminase large subunit"
                     /protein_id="HDC2862802.1"
                     /translation="MISNKYVDEYINLWKQGKIILNKERIDLFNYLQKHIYSRDDVYF
                     DEQKIEDCIKFIEKWYFPTLPFQRFIIANIFLIDKNTDEAFFTEFAIFMGRGGGKNGL
                     ISAISDFLSTPLHGVKEYHISIVANSEDQAKTSFDEIRTVLMDNKRNKTGKTPKAPYE
                     VSKAKIINRATKSVIRYNTSNTKTKDGGREGCVIFDEIHYFFGPEMVNVKRGGLGKKK
                     NRRTFYISTDGFVREGYIDAMKHKIASVLSGKVKNSRLFAFYCKLDDPKEVDDRQTWE
                     KANPMLHKPLSEYAKTLLSTIEEEYNDLPFNRSNKPEFMTKRMNLPEVDLEKVIAPWK
                     EILATNREIPNLDNQMCIGGLDFANIRDFASVGLLFRKNDDYIWLGHSFVRQGFLDDV
                     KLEPPIKEWEKMGLLTIVDDDVIEIEYIVDWFLKAREKYGLEKVIADNYRTDIVRRAF
                     EDAGIKLEVLRNPKAIHGLLAPRIDTMFAKHNVIYGDNPLMRWFTNNVAVKVKPDGNK
                     EYIKKDENRRKTDGFMAFVHALYRADDIVDKDMSKALDALMSIDF"
     gene            17202..18389
                     /locus_tag="O7798_000527"
     CDS             17202..18389
                     /locus_tag="O7798_000527"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000025279.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage portal protein"
                     /protein_id="HDC2862803.1"
                     /translation="MSILEKIFKTRKDITYMLDLDMIEDLSQQAYVKRLAIDSCIEFV
                     ARAVAQSHFKVLEGNRIQKNDVYYKLNIKPNTDLSSDSFWQQVIYKLIYDNEVLIVVS
                     DSKELLIADSFYREEYALYDDIFKDVTVKDYTYQRTFTMQEVIYLKYNNNKVTHFVES
                     LFEDYGKIFGRMIGAQLKNYQIRGILKSASSAYDEKNIEKLQAFTNKLFNTFNKNQLA
                     IAPLIEGFDYEELSNGGKNSNMPFSELSELMRDAIKNVALMIGIPPGLIYGETADLEK
                     NTLVFEKFCLTPLLKKIQNELNAKLITQSMYLKDTRIEIVGVNKKDPLQYAEAIDKLV
                     SSGSFTRNEVRIMLGEEPSDNPELDEYLITKNYEKANSGENDEKEKDENTLKGGDEDE
                     SGD"
     gene            18373..19110
                     /locus_tag="O7798_000528"
     CDS             18373..19110
                     /locus_tag="O7798_000528"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001607394.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Clp protease ClpP"
                     /protein_id="HDC2862804.1"
                     /translation="MKAEIKGVIVSNEDKWVYEMLGMDSTCPKDVLTQLEFSDEDVDI
                     IINSNGGNLVAGSEIYTHLRAHKGKVNVRITAIAASAASLIAMAGDHIEMSPVARMMI
                     HNPSSIAQGEAKDLNHAAETLEHVGQIMAEAYAVRAGKNKQELVEMMARETWLNADEA
                     IEQGFADSKMFENDNMQIVANNTQVLSKDVLNRVTALVSKTPEVNIDIDAIANKVIEK
                     INMKEKESEIDVADSKVSANGFSRFLF"
     gene            19134..20279
                     /locus_tag="O7798_000529"
     CDS             19134..20279
                     /locus_tag="O7798_000529"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001573791.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage major capsid protein"
                     /protein_id="HDC2862805.1"
                     /translation="MTINLSETFANAKNEFINAVNNGEPQERQNELYGDMINQLFEET
                     KLQAKAEAERVSSLPKSAQSLSANQRSFFMDINKNVNYKEEKLLPEETIDRIFEDLTT
                     NHPLLADLGIKNAGLRLKFLKSETSGVAVWGKIYGEIKGQLDAAFSEETAIQNKLTAF
                     VVLPKDLNDFGPAWIERFVRVQIEEAFAVALETAFLKGTGKDQPIGLNRQVQKGVSVT
                     EGAYPEKEEQGTLTFANPRATVNELTQVFKYHSTNEKGKSVAVKGNVTMVVNPSDAFE
                     VQAQYTHLNANGVYVTALPFNLNVIESTVQEAGKVLTYVKGLYDGYLAGGINVQKFKE
                     TLALDDMDLYTAKQFAYGKAKDNKVAAVWKLDLKGHKPALEGTEETL"
     gene            20299..20559
                     /locus_tag="O7798_000530"
     CDS             20299..20559
                     /locus_tag="O7798_000530"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000238242.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDC2862806.1"
                     /translation="MVKFKVVRAFKDIEHNQHKYKVGELYPAEGYNNPRVELLTNQIK
                     NKYDKVYIVPLDKLTKQELLELCESLQKKRLVQWLKVKSSTY"
     gene            20572..20856
                     /locus_tag="O7798_000531"
     CDS             20572..20856
                     /locus_tag="O7798_000531"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009560502.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage head-tail adapter protein"
                     /protein_id="HDC2862807.1"
                     /translation="MTIDDLLVKFKSLEKIDHNSEDEYLKQLLKMSYERIKNQCGVFE
                     LENLIGQELILIRARYAYQDLLEHFNDNYRPEIIDFSLSLMEVSEDEESV"
     gene            20840..21202
                     /locus_tag="O7798_000532"
     CDS             20840..21202
                     /locus_tag="O7798_000532"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000755150.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="head-tail adaptor protein"
                     /protein_id="HDC2862808.1"
                     /translation="MKKVFKKPRITTKRLNTRVHFYKYTENNGPEAGEKEEKLLYSCW
                     ASIDGVWLRELEQAISNGTQNDIKLYIRDPQGDYLPSEEHYLEIESRYFKNRLNIKQV
                     SPDLDNKDFIMIRGGYSS"
     gene            21199..21603
                     /locus_tag="O7798_000533"
     CDS             21199..21603
                     /locus_tag="O7798_000533"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000114224.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HK97 gp10 family phage protein"
                     /protein_id="HDC2862809.1"
                     /translation="MSVKVIGDKALERELEKRFGIKEMVKVQDKALIAGAKVIVEEVK
                     KQLKPSKDTGALINEVSFSKPEWINGKRTITVHWRGSKDRYKIVHLIEYGHVQKGTGK
                     FIKPKAMGGVNRAIRQGQNKYFETLKRELKKL"
     gene            21600..22007
                     /locus_tag="O7798_000534"
     CDS             21600..22007
                     /locus_tag="O7798_000534"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000565496.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDC2862810.1"
                     /translation="MIDILYKVHEVISQDRIIREHVNINNIKFNKYPNVKDTDVPFIV
                     IDDIDDPIPTTYTDGDECAYSYIVQIDVFVKYNDEYNARIIRNKISNRIQKLLWSELK
                     MGNVSNGKPEYIEEFKTYRSSRVYEGIFYKEEN"
     gene            22008..22652
                     /locus_tag="O7798_000535"
     CDS             22008..22652
                     /locus_tag="O7798_000535"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000268736.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HDC2862811.1"
                     /translation="MAVKHASAPKAYINITGLGFAKLTKEGAELKYSDITKTRGLQKI
                     GVETGGDLKTAYADGGPIESGNTDGEGKISLQMHAFPKEIRKIVFNEEYDEDGVYKET
                     QGKQNNYVAIWFRQERRDGTFRTVLLPKVMFTNPKIDGETAEKDWDFSSEEVEGEALF
                     PLVDNKKSVRKYIFDSANMTNHDGDGEKGEEAFLKKILGEEYTGNVTEGNEETL"
     gene            22694..22918
                     /locus_tag="O7798_000536"
     CDS             22694..22918
                     /locus_tag="O7798_000536"
                     /inference="COORDINATES: protein motif:HMM:NF014427.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Ig-like domain-containing protein"
                     /protein_id="HDC2862812.1"
                     /translation="MPDSIKTLKVGDTYDLNVVVEPSNQSKLLKYTTDQTNIVSINSD
                     GQVTAEAQGIATVKATVGNMSDTITINVEA"
     gene            22968..23318
                     /locus_tag="O7798_000537"
     CDS             22968..23318
                     /locus_tag="O7798_000537"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001096355.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDC2862813.1"
                     /translation="MAKLKRNIIQLVEDPKANEIKLQTYLTPHFISFEIVYEAMDLID
                     DIEDENSTMKPREIADRLMDMVVKIYDNQFTVKDLKERMHAPDGMNALREQVIFITQG
                     QQTEETRNFIQNMK"
     gene            23345..23506
                     /locus_tag="O7798_000538"
     CDS             23345..23506
                     /locus_tag="O7798_000538"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDC2862814.1"
                     /translation="MLKNMDTLMMDLIENGKDANEVLKMPFHYVLSIYQNKNNDISEE
                     KAEALIDAF"
     gene            23563..28107
                     /locus_tag="O7798_000539"
     CDS             23563..28107
                     /locus_tag="O7798_000539"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001799555.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail tape measure protein"
                     /protein_id="HDC2862815.1"
                     /translation="MGERIKGLSIGLDLDAANLNRSFAEIKRNFKTLNSDLKLTGNNF
                     KYTEKSTHSYKQRIKELDGTITGYKKNVDDLAKQYGKVSQEQGENSAEAQKLRQEYNK
                     QANELNFLEKELEKTTTEFEEFKKAQVEAQRMAESGWGKTSKVFESMGPKLTKMGDGL
                     KSIGKGLMIGVTAPVLGIAAASGKAFAEVDKGLDTVTQATGATGGELKKLQNSFKDVY
                     GNFPADAETVGGVLGEVNTRLGFTGKELESATESFLKFSHITGSDGVQAVQLITRAMG
                     DAGIEADEYQSVLDMVAKAAQASGISVDTLADSITKYGAPMRAMGFEMKESIALFSQW
                     EKSGVNTEIAFSGLKKAISNWGKAGKDPREEFKKTLAEIERTPDIASATSLAIEAFGA
                     KAGPDLADAIKGGRFSYQEFLKTIEDSQGTVNQTFKDSESGSERFKVAMNKLKLVGAD
                     VWASIESAFAPVMEELIKKLSVAVDWFSSLSDGSKRSIVIFGGIAAAIGPVVFGLGAF
                     ISTIGNAVTVLAPLLASIVKAGGLISFLSTKVPILGTVFTALTGPIGIVLGVLAGLAV
                     AFTIAYKKSETFRNFVNGAINSVKQTFSNFIQFIQPFIDSVKNVFEQAVSAIVDFAKD
                     IWSQINGFFNENGISIVQALQNICNFIKAIFEFILNFVIKPIMFAIWQVMQFIWPAVK
                     ALIVSTWENIKGVIQGALNIILGFIKFFSSLFTGNWRGVWDGIVMILKGTVQLIWNLI
                     QLWFVGKILGVVRYFGGLLKGLISGIWGVIKGIFTKSLSAIWNATKSIFGFLYNSVKS
                     IFTNMKNWLSSTWNNIKSNTVGKAHSLFTGVRSKFTSLWNATKDIFTKLRNWMSNIWN
                     SIKDNTVGIAGRLWDRVRNIFGSMRDGLKSIISKIKDHIGGMVDAVKRGLNKLIEGLN
                     WVGGKLGMDKIPKLHTGTEHTHTTTRLVKNGKIARDTFATVGDKGRGNGPNGFRNEMI
                     EFPNGKRVITPNTDTTAYLPKGSKVYNGAQTYSMLNGTLPRFHFGTTMWKDIKSSASS
                     AFNWTKDQIGKGTKWLGDKVGDVMDFIDNPGKLLNYVLKAFGVDFSSLTKGMGIVGDI
                     TKASWNKIKSKAINWIKEGLESQAGDGSVFDSFRILQPYSAPPKPPNPNYPFNGGVHH
                     GVDYDTPTGTPIRTPMGGRVRSWYDNYGGGKAITVQKGRTFLWFMHLSEQLRRTGEQI
                     KAGQLIGKSGNTGSMTNYRHLHFQVNQGGESNRYSTDPIPWLRKNDKTGGKNSPGGSG
                     SENARRAIRTAQNILGGQYKASWITHEMMRVARRESNYTANAVNNWDSNARAGTPSRG
                     MFQMIDPSFRAYAKSGYNNPLNPTHQAISAMRYIVGKWVPRTGSWRAAFKRAGDYAYA
                     TGGKVYNGLYHLGEEGYPEWVIPTDPARKNEAMKMLHYAAAEVRGRKASKNKRPSQLS
                     SVNGFDDPSLLLKMIEQQQQQIALLLKIAQSNDVIADKDYQPIIDEYAFDKKVNASIE
                     KRERQESTKVKFRKGGIAIQ"
     gene            28104..29588
                     /locus_tag="O7798_000540"
     CDS             28104..29588
                     /locus_tag="O7798_000540"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500667.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail family protein"
                     /protein_id="HDC2862816.1"
                     /translation="MIDTIKVNNKTIPWLYVERGFEIPSFNYVLKTENVDGRSGSIYK
                     GRRLESYSFDIPLVVRNDYLSHNGFKTHDDVLNELVKFFNYEEQVKLQFKSKDWYWNA
                     YFEGPIKLHKEFAIPVKFTIKVVLTDPYKYSVTGYKNTAISDQVSVVNSGTADTPLIV
                     EARAIKPSSYFMITKNDEDYFMVGDDEVTKEVKDYMPPVYHSEFRDFKGWTKMITEDI
                     PSNDLGGKVGGDFVISNLGEGYKATNFPDAKGWVGAGTKRGLPKAMTDFQITYKCIVE
                     QKGKGAGRTAQHIYDSDGKLLASIGYENKYHDRKIGHIVVTLYNQKGDPKKIYDYQNK
                     PIMYNLDRIVVYMRLRRVGNKFSIKTWKFDHIKDPDRRKPIDMDEKEWIDGGKFYQRP
                     ASIIAIYSAKYNGYKWMEMNGLGSFNTEILPKPKGARDVIIQKGDLVKIDMQAKSVVI
                     NEEPMLSEKSFGSNYFNVDSGYSELIIQPENVFDTTVKWQDRYL"
     gene            29604..33389
                     /locus_tag="O7798_000541"
     CDS             29604..33389
                     /locus_tag="O7798_000541"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500666.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDC2862817.1"
                     /translation="MIHVLDFNDKIIDFLSTDDPSLVRAIHKRNVNDNSEMLELLISS
                     ERAEKFRERHRVIIRDSNKQWREFIINWVQDTMDGYTEIECIASYLADITTAKPYAPG
                     KFEKKTTSEALKDVLSDTGWEVSEQTEYDGLRTTSWTSYQTRYEVLKQLCTTYKMVLD
                     FYIELSSNTVKGRYVVLKKKNSLFKGKEIEYGKDLVGLTRKIDMSEIKTALIAVGPEN
                     DKGKRLELVVTDDEAQSQFNLPTRYIWGIYEPQSDDQNMNETRLRSLAKTELNKRKSA
                     VMSYEITSTDLEVTYPHEIISIGDTVRVKHRDFNPPLYVEAEVIAEEYNIISENSTYT
                     FGQPKEFKESELREEFNKRLNIIHQKLNDNISNINTIVKDVVDGELEYFEHKIHKSDT
                     PPENPVNDMLWYDTSNPDVAVLRRYWNGRWIEATPNDVEKLGGITREKALFSELNNIF
                     INLSIQHASLLSEATELLNSEYLVDNDLKEDLQASLDAVIDVYNQIKNNLESMTPETA
                     TIGRLVDTQALFLEYRKKLQDVYTDVEDVKMAISDRFKLLQSQYTDEKYKEALEIIAT
                     KFGLTVNEDLQLVGEPNVVKSAIEAARESTKEQLRDYVKTSDYKTDKDGIVERLDTAE
                     AERTTLKGEIKDKVTLNEYRNGLEEQKQYTDDQLSDLSNNPEIKASIEQANQEAQEAL
                     KSYIDAQDDLKEKESQAYADGKISEEEQRAIQDAQAKLEEAKQNAELKARNAEKKANA
                     YTDNKVKESTDAQRKTLTRYGSQIIQNGKEIKLRTTKEEFNATNRTLSNILNEIVQNV
                     TDGTTIRYDDNGVAQALNVGPRGIRLNADKIDINGNREINLLIQNMRDKVDKTDIVNS
                     LNLSREGLDINVNRIGIKGGDNNRYVQIQNDSIELGGIVQRTWRGKRSTDDIFTRLKD
                     GHLRFRNNTAGGSLYMSHFGISTYIDGEGEDGGSSGTIQWWDKTYSDSGMNGITINSY
                     GGVVALTSDNNRVVLESYASSNIKSKQAPVYLYPNTDKVPGLNRFAFTLSNADNAYSS
                     DGYIMFGSDENYDYGAGIRFSKERNKGLVQIVNGRYATGGDTTIEAGYGKFNMLKRRD
                     GNRYIHIQSTDLLSVGSDDAGDRIASNSIYRRTYSATANLHITSAGTIGRSTSARKYK
                     LSIENQYNDRDEQLEHSKAILNLPIRTWFDKAESEILARELREDRKLSEDTYKLDRYV
                     GLIAEEVENLGLKEFVTYDDKGEIEGIAYDRLWIHLIPVIKEQQLRIKKLEESKNEG"
     gene            33379..33531
                     /locus_tag="O7798_000542"
     CDS             33379..33531
                     /locus_tag="O7798_000542"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500665.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDC2862818.1"
                     /translation="MKDNKQGLQANPEYTIHYLSQEIMRLTQENAMLKAYIQENKENQ
                     QCAEEE"
     gene            33578..33865
                     /locus_tag="O7798_000543"
     CDS             33578..33865
                     /locus_tag="O7798_000543"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500664.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDC2862819.1"
                     /translation="MAKEIINNTERFILVQIDKEGTERVVYQDFTGSFTTSDSASYAQ
                     DFKSEENAKKIAETLNLLYQLTGNQNGVKVVKEVVDRTDLSSDKSVDSETM"
     gene            33921..34295
                     /locus_tag="O7798_000544"
     CDS             33921..34295
                     /locus_tag="O7798_000544"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000340977.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDC2862820.1"
                     /translation="MDDIQKIKKELSELVERVDDVEILANETADHVLELREEHKQHHN
                     ELRESHKELKDKQDKVVDENLEQTKILNRIEERYQTQVDVAQKNEEKTLAQNKWLVGA
                     IWALVTIVMIAVITASITALLP"
     gene            34712..35485
                     /gene="sep"
                     /locus_tag="O7798_000545"
     CDS             34712..35485
                     /gene="sep"
                     /locus_tag="O7798_000545"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000750405.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="staphylococcal enterotoxin type P"
                     /protein_id="HDC2862821.1"
                     /translation="MKKTTFILLSFIALTLITSPFVNCSEKSEEINGKDLQKKSELQG
                     TALSNLRQTYYHNGSAIIENKESNDQFLKNTILFNDFFTGHQWYNDLLVDLGSKDTAN
                     IYKGKKVDLYGVYYGYQCTGGTPFKTACMYGGVTLHDNNQLEEEKKVPINLWIDGKQN
                     TVPLGTVKTNKKEVTVQELDLQSRHYLHETYNLYNTDAFNGKIQRGLIEFHPSSGDSV
                     GYDLFGAQGQYPDTQLRIYRDNKTIKSKNMHIDIYLYTT"
     gene            35688..35864
                     /locus_tag="O7798_000546"
     CDS             35688..35864
                     /locus_tag="O7798_000546"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500662.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="putative holin-like toxin"
                     /protein_id="HDC2862822.1"
                     /translation="MDRWWLSEYKEVVPMVALLKSLERRRLMITISTMLQFGLFLIAL
                     IGLVIKLIELSNKK"
     gene            complement(35917..36024)
                     /locus_tag="O7798_000547"
     CDS             complement(35917..36024)
                     /locus_tag="O7798_000547"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500661.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDC2862823.1"
                     /translation="MIFILWCVNLYIEKGQHAQTCYPSEPVKKTVAILD"
     gene            36076..36330
                     /locus_tag="O7798_000548"
     CDS             36076..36330
                     /locus_tag="O7798_000548"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500660.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage holin"
                     /protein_id="HDC2862824.1"
                     /translation="MINWKIRMKQKSFWVAILSAIFLFAQNIAKAIGYDIQVYTEQLT
                     DGLNAILGFLVLTGVIQDPTTKGIGDSHQALEYEEPRRKY"
     gene            36342..37097
                     /locus_tag="O7798_000549"
     CDS             36342..37097
                     /locus_tag="O7798_000549"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500659.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CHAP domain-containing protein"
                     /protein_id="HDC2862825.1"
                     /translation="MKTYSEARARLRWYQGRYIDFDGWYGYQCADLAVDYIYWLLEIR
                     MWGNAKDAINNDFKNMATVYENTPSFVPQIGDVAVFTKGIYKQYGHIGLVFNGGNTNQ
                     FLILEQNYDGNANTPAKLRWDNYYGCTHFIRPKYKSEGLMNKITNKVKPPAQKAVGKS
                     ASKITVGSKAPYNLKWSKGAYFNAKIDGLGATSATRYGDNRTNYRFDVGQAVYAPGTL
                     IYVFEIIDGWCRIYWNNHNEWIWHERLIVKEVF"
BASE COUNT        14050 a         5274 c         7235 g        10563 t
ORIGIN      
        1 aatttaaggt tagtattatg aaataatgga ttggtttatt ctttagtact aacttcgtag
       61 taaattatat agttcgctaa attgtattta tctactatat ttttggaata aacaatttcc
      121 ttttctttct tcagtaaatt ataaaaatct acatcatttt cgttagctga ttctattttg
      181 gtgatatcag attgtctaac gattctttta gatctgtcaa ggtatataaa tttccctgat
      241 ttagaattag tctttttatt cacaccgacg taaattgaaa gtaatatact ttttccaaaa
      301 acagcatcac tgtgattatg gttttcatat tctataacta agaatacatg cttttttgta
      361 aaaatttttt tgatcatcgt tattattcct ttattaaatt tattaagtct tcttcattta
      421 aaaattgaat ttttgcacca tttccaacat attctcgagc ttttcgttgt tttgaaacta
      481 gtccgttcac atctttatat ttatcatctt gaacaccttc gactaaaata tctgtttttg
      541 cagttacgtc acttctgata taagctcctt tctttctagt taatatcatt aaatcttgtt
      601 tttcagtgtc aaaattacct gtaaaaacaa catttttatc ttttaaaata gggattacac
      661 tttccacttc tattttatta atctcagata ttttcatatg aattttttga aatcctgaat
      721 cgaaaagttt agttggagag ttagaatatt tgctaaatct aatgtattgc ttaggcatat
      781 aatgtattaa ttttaataca ctataatgct gattgttttt agcgagtgat atcaacatct
      841 tcgataaagc tagcacgtca aatttagcag aatgtaattt ttctttatcg atatcatata
      901 agctacacaa attttctaat ttaaaactag agattgcgtg gaagcttcta aagatattta
      961 tactatcgac atacatgaag tttggaacag gtaagtcata ataattatta gtatttttta
     1021 atactgaaat atcaaaaagt gcattatgag caataattaa atgtgattct tttaaaagat
     1081 agagaatttc ttggtaaata tctggatatt taggtgcttt taatatgaca tcttcaggta
     1141 ttttatgtat tttagcgttt ttcaagttat atctattatt aggaggatta atataagatg
     1201 aataaacttt tactattgat aaatccttaa ttaaagatac agcaacttcg caagggctgt
     1261 tcatatgttc attcatagtt tcaaagtcta agactgcaat atcatatttt ttcatttgca
     1321 agtgctcctt ttataaaata acttttccaa ttaacctcac actttcattt ctataaaagt
     1381 gtagatcgtc gtaatcttta tttagtgaaa ctagagtcaa tctatcatct tcaacaaaga
     1441 ctttcttaac gtacgcttct tcttcaatga tgaatatacc aatttgtcca ttctttatat
     1501 tgtgagtttt ctccacaaat atgatttcgc catctttaaa cataggttcc atagaatcac
     1561 catttacttt taacgctaaa tcgtgtgtgg ggataggtcc tttaaccatt tcagtaaata
     1621 gcgtttcatc gtgtaaacgt tctcctacac cagcagagac gcaaccattg acgttaactg
     1681 gagttttctc ctgtttatat gaattaatat ctacaacgtt atctccttta gaattctgtt
     1741 cttccaattg ttcatttgca tagttaagta cgttttcttg gcggggaggt gtgagtttgt
     1801 tgtatatgga agtgatgtcg ttatcgtctt tgtatgtagt atctatgtcg cttttaccaa
     1861 cctcgaaaac atcagctatc ctttgtataa cgccgtgaga ggggttggaa cgtaaattta
     1921 aataatcgct taaagtagat ggttttatgt taatgagttc agcaagtttc ttttgagaca
     1981 tatttgaatc gttgagaaat tttctaatgt ttttggctat aataatattt ctttctttgt
     2041 tcatattact tacctccttt tttcttatta tacgaaattt tcatatcata gtaaagtttt
     2101 ttacgaaaaa aacgtattta atgttgacaa tacgaaaatt tcgtattata ttaggtttac
     2161 gaaaggcggt gacaacatga aaacattaaa agagttgagg actgattacg gattgactca
     2221 aaaagagtta ggagatttat ttaaggtctc atcacgtaca attcaaaata tggaaaaaga
     2281 ctctacaaac attaaagata gtttactttc taagtatatg agtgctttta atgttaaata
     2341 tgatgatatt tttttaggta atgaatacga aaatttcgta tttacgaatg ataaaaagaa
     2401 atcaattatt ttagcattta aagaaaaaca aacatcttaa taggaggaat aacaaatgaa
     2461 cattcaagaa gcaacgaagc tagcgatgga gaaaggaata agtataagga gagagaatca
     2521 agatgtgtat gggatattac caactaattt gcagcgttat caatgcctag tcgtatctag
     2581 acactataag aaaaaaagac aaaccgccgc cggaaggtgg cagcctagcg cagacgattt
     2641 aatagcagat gattggattt tagattatta attttttcaa atctctaatt aaacccataa
     2701 gtgttttgta atcttttttg gattctgatt ctgagtaggc gataccttct cgagaaagag
     2761 ccatctcaag aaaaccgcca tcttcagcag aagcaattac aaaatctcta tgctttaatt
     2821 caagaactgc atcgatatag tcttcaaaat taaaacctaa aaagaaagcg ttaaatgagg
     2881 attcatcact accgaaataa gatgcagaac gtttagacat accttcgtca attctatcaa
     2941 ggtaaattga ataaagttgt aaaaggacaa atttagcttc atcagtcata agtcattcac
     3001 ctccttaata ggagtatagc agaaaggagc acaaacaata tgcaagcatt acaaacaaaa
     3061 tcgaacatag gcgaaatgtt caacatacaa gaaaaagaaa atggagaaat cgcaatcagc
     3121 ggtcgagaac ttcatcaagc attagaggtt aagactccat acaaaaaatg gtttgaaaga
     3181 atgagtgatt acggatttga agaaaatatc gattatatag tcacggacat ttttgtccat
     3241 aacccactag gaggtcgtca gaatcaaact gaccacgcac tcacactaga cactgcaaaa
     3301 gagattgcaa tgattcaacg tagtgaacct ggcaaacgtg caagacaata cttcatccaa
     3361 gttgaaaaag catggaatag cccagaaatg attatgcaac gtgctttaaa aattgctaac
     3421 aacacaatca atcaattaga aacaaagatt gaacgtgata aaccaaaaat tgtatttgca
     3481 gatgcagtag ctactactaa gacatcaatt ttagttggag agttagcaaa gatcattaaa
     3541 caaaacggta taaacatcgg gcaacgcaga ttgtttgagt ggttacgtca aaacggattc
     3601 cttattaaac gcaagggtgt ggattataac atgcctacac agtattcaat ggaacgtgag
     3661 ttattcgaaa ttaaagaaac atcaatcaca cattcggacg gtcacacatc aattagtaag
     3721 acgccaaaag taacaggcaa aggacaacaa tactttgtta ataagttttt aggagaaaaa
     3781 caaacatctt aataggagga acgaacaatg caagctcaaa acaaaaaagt catctattac
     3841 tactatgacg aagaaggtaa tagacgaccc gttaatattc aatacaacga tggctacgac
     3901 ttaatgatag accagcgttt tattgaaatg acgcttgaaa gacatccgca tttaaaaaat
     3961 aacttttatg gattaataga tggaaaagaa tttaagttag attaaatttt tgtgttagat
     4021 aattaaaagc taatttgctt agcaatgtta cggacatact agtggttttg tttgcgactt
     4081 ttttaacttc tttccaagtg tgattgtctc ggatattatc taaaaattca tgccctgacc
     4141 aagttatatc gttaattgta taaccataaa tatgtccatc ttcccaaccg aatttaacac
     4201 taacatactt tgcttcttcc agttttaata atgcatacat tacagtttca aaatcatatt
     4261 ttccaaatac aacattatct ttgaaattgt attcggtgag cggttcacca atctttttat
     4321 tagtttcaat ttctaacaaa agatgtctaa cacaatcatg atctaatttc atacttatca
     4381 ctactttagg ttgataacaa cattatacac gaaaggaaag atagaaatgc cacatatttt
     4441 aaacgtaaca gttccaatac ctgaaacaca cgtgcttatc acaaaagatg aatatgaaga
     4501 gttaatagct tactcattag accctgtatg gaacatgagc gacttaaaga agaaattaaa
     4561 aattgcatct gatgaaacaa tcaaagacag gttattattt catcctagac tcgaaaaaga
     4621 gttaagagca caaggtatcg tacattatcc tgatgagaat tttaatcgtt ggaggtttaa
     4681 cgcaagaagg atgcataagt ttgtagatga acattttaat gagatttaca aaggagggca
     4741 caacaaatga gtaaaactta taaaagctac ctagtagcag tactatgctt cacagtctta
     4801 gcgattgtac ttatgccgtt tctatacttc actacagcat ggtcaattgc aggattcgca
     4861 agtatcgcaa cattcatatt ctataaggaa tacttttatg aagaataaaa aaactgctac
     4921 ttgcgccaac aagtaacagt aacaaacatt taagaaataa aattcaagtt aaatataaaa
     4981 cgaaaaacgg aggaagtcaa ccatgactaa aaattataaa gacatgacgc aggaagaaat
     5041 aaaagactta ttatctgaaa aaacggcaga attgtatgaa ttagcgaaag aaattaaggg
     5101 agaaagtaaa tttgatattt tgcttttctc atcaatagga gttatcgacg gagattattt
     5161 agcaggttca agttctgtga ttggtcatac ttttgatctt gcttacttat tggatagcac
     5221 taagagttat aaagatattg tcaatgttct ccaaatgtgt aaatcacaaa aaattctcgg
     5281 tatagatgac gacaaggagg actaaaacaa tgtattacaa aacgggtgac gtatgtcgaa
     5341 aaatatttaa tgtagatggc tttgattttc aattaagagt taagaagcga gcatatagtg
     5401 tcgaaatagt cgttttagat catgaaggaa attcaattga cgggctacta gtttctgacg
     5461 agaacgatct atacacagct ttagatattt tgaaacaaag tatttatgaa tggattgaaa
     5521 ataacacaga tgaacaggac agactaatta acttagtcat gaaatggtag gtataagcat
     5581 gagagataca gaaagaaata tattgaatat ttttaagacg ttattcgacg aatatacttt
     5641 gtcaaaccaa cgagcattat tggaaattga acgtaatcat cacggatact tatcgattaa
     5701 tttcttgcac tatcacgaca gttacaaaac aaacaataag cttgtgcaga tacatgaaat
     5761 caatccagac agccatgaac gaataaaaaa tttaattatc gaggtgctaa gaggtcatcg
     5821 gaagattaaa aaaggagcat gaggaaagat atgaaaataa ataagttaac tatatcgaac
     5881 tttgctggaa tcaaagaaga aaaatttaac tttgacggta aagatgcaaa aatatacggc
     5941 aataatgcga ctggcaagac tacaacagca accgcattac aatggctgct tttcgataag
     6001 ggtttagacg gttcaaccaa atcatttaac cctgtacctt taaacgaaaa aaacgaagaa
     6061 aattatgagt taattccgac tgttttcgca gaatttgaaa tcgacggaaa aattacgact
     6121 tttaaaaaag agtcacatcc taaatacaca ataaatcaaa aaacgaatcg caaggaatac
     6181 tcacgaagtc gaacgaagaa acaatatatc aatgatgaat caataaaagt aaaggattat
     6241 aaagctcgta ttgatgaact gattgatgaa gatgtattca agttaattac gaaccctcaa
     6301 gcatttaact tactagattg gaagaaacga agaagtttgt tgtttgaaat cgctaaacca
     6361 atcaatgatg aggatgtcat taaaacaaat gatgatttta aagaactaaa taatattctt
     6421 ggagatcacg aaattgaaac aaagaaaaag attcttacag acaagataaa acagattaac
     6481 aaagatatca aagatattcc gatacgtatt aaccaaacgc aacaaaataa gcaggatgta
     6541 ccggaattcg ataatgatag acacacaatc ataaaacaag aaattgagca acttgaaaat
     6601 gagcgtatag atattcaaaa cggtgcagaa gaaattaatt tgcgtaacca attagctgat
     6661 aaacaatcag aattgaagcg catagaagct aataatagcg ccagtaatga gaacaaaata
     6721 catgctttaa caaatgagct acacgttgaa aatggaacgg ttgcgaatct taaaacaaga
     6781 ttaaagcaaa acaaacaaca aattacacat gaagaaaatc gacgtaatca attattagaa
     6841 aatcataaag gattaaaaag tgatttagaa aaagctaaaa atcaaaaatt tgaatatctt
     6901 gatgacaatg tatgtagttg ttgtggtcaa cagttaccag ctgaacaagt gagtgaggta
     6961 agagaaaaag cattgcagaa attcaatgca aacaaatcga aagaattaga aacaatacaa
     7021 acatctatca atcacattat ttcagagggc aagaaaataa agccaattat cgagaaatta
     7081 gaggatgaca acaataattt acaaattaaa atcaacgaag cagaagagcg ttcagcaaga
     7141 atacaaaaca aaattaataa gttgaaaaca actcacgttg acgttacgca aactgacgaa
     7201 tacaaagcag taatgttaga gataaatgag attaatcaaa aacgctctaa catcaggaaa
     7261 actattcaag ataaagtttc aggaatagat gacaaaataa gcgaacttac tcaagaaaaa
     7321 tcagaaattg aagtgtcaat atcaatcgaa aaatcaaata aacatctaga tgatgttatt
     7381 tctgaattaa gaaatgaaga agacagatta ttggatgaaa aagaaaagta ttcacatgac
     7441 ctttatatct taaaagaatt tacaacaaca aaagtcaaaa tgcttactga aaacatcaat
     7501 aacgaatttg atattgctga atttaagcta ttcaatacct tagttaacgg cgaattagaa
     7561 gaaacatgtt caacaacggt taatggtgtc gagtatgaca gcggtttaaa taacgcctca
     7621 agaattaatg ttggcttaga tatcatcaac acactatcaa aacattttaa agttacagcg
     7681 ccaatattta ttgataatgc tgaatcagta acagagctta tcaaaacaga atcacaacaa
     7741 attcaattga tagtaaatga acaagataaa aaattaagaa tggagactat ataaaatgac
     7801 tgaaaataat aaattacaaa ctattgaaca acaattagta caagaaaaga acgtatctga
     7861 caacgtatta aacaaagtga gagttttaga gtcacaaggc aatttggaat tgccaaatga
     7921 ttattcacca agtaatgcca tgaaacaagc atggttacaa atcagccaag ataacaaatt
     7981 aatgagttgt aacgatacaa gcaaagcaaa tgccttatta gacatggtaa cgcaaggttt
     8041 aaatccagct aaaaatcaat gctactttat tccttacggc aacaaaatgc agttacaacg
     8101 tagctatcac ggtaatgtaa tgatgttaaa acgtgatgca ggtgctcaag atgttgttgc
     8161 tcaagtgatt tataaaggcg atacattcaa gcaagaaatg ggagaaacag gacgtatcaa
     8221 agcgattaaa cacgaacaag acttctttaa catcgacaaa gaaaacatta tcggtgcgta
     8281 ctgcacaatc gtatttaatg atggacgaga taactatatt gaagtcatga ctattgaaca
     8341 aattaaacaa gcatggatgc agtcatcaat gattaaagat gaaaaagcat tacaaaattc
     8401 taaaacacat aataatttca aagaagaaat ggctaaaaaa acagttatca atagagctgc
     8461 taaacgttat atcaacacat caacagatag caatcttttc aaatacgcac aagaatccga
     8521 acaacgtcaa cgcaaagaag tgttggacgc agaagttgaa gaaaatgcaa atcaagaaca
     8581 attggacttt gaacaaccag ttcttgaaga agcacaatac acagaattag aaaatgataa
     8641 gcctattgat gtatctgact ttgaagaaat aaaagaacct gcaacagaaa aagaaagcga
     8701 agaagagcca ttttaattga aacaatagca actggttcaa gtggtaactg ctacgtctta
     8761 aatgatggac gtactacgtt actatttgag gcaggtataa aatttgaacg tgttcaaaag
     8821 catttcaaat ataaaacaag acatatagca gggtgtctta tcacacacga acatggtgat
     8881 catgcaaagt atacaaagca gtttgtcgac aatggtgtaa tcagctatat gactgctgga
     8941 acacaacaag ctatgaattt tgaaagtcat cgcttatgca cgattaaggc aaagcaagag
     9001 ctgcgaatag gcacatggtc aattctaccg tttgacatcg aacatgatgc taacgagcct
     9061 gtggctttct tattacaaag cacactaggt tataaggttc tgtatgttac tgatacaaag
     9121 tatttgaaat acaaatttaa tggcattacg cacatgatgc tagaagttaa ttatatctat
     9181 gaacaaatgc aagaaaacat aaaaaacggc agtgtgcaca gcacattagc aaacagaatt
     9241 atggagtctc attttagctt agaacatgct atcggaatgt taaaagcaaa tgatttaact
     9301 agactcgaag aaatacattt aattcattta agtagtcaaa attcaaatgc aaaatacatt
     9361 aaaagtgaaa tacaaaaagt gacgggcgcg cccgtttatt ttggaggttt ataaatgcta
     9421 aacagaacaa tattagttgg tcgtttaact agagacccag aattaagaac cactcaaagt
     9481 ggtgtaaatg tagcatcatt cacattagca gttaaccgta catttacaaa tgcacaaggc
     9541 gagcgcgagg cagactttat taatatcatc gtatttaaaa aacaagcaga gaacgttaat
     9601 aaatacctat ctaaaggatc gttggcgggc gtagatggta ggttacaaac gcggaactat
     9661 gaaaataagg aaggtcaacg tgtatacgtt acggaagtta ttgctgatag tattcaattt
     9721 ttagaaccga aaaactcaaa tgacactcaa caagatttat atcaacaaca agtacaacaa
     9781 acacgtggac aatcgcaata ttcaaataac aaaccagtaa aagataatcc gtttgcgaat
     9841 gcaaatggtc cgattgaact aaatgatgat gatttaccat tctaatttaa ccggtttgaa
     9901 agtgaggtgt gtatatgact ggttggataa gtattgatcg ctcaattcaa aatcattggc
     9961 tatttaaaga aaagagaaca ttttcaaagt tcgaagcatg gatatattta ctcatggaag
    10021 cgaatcattc agaggcaaaa gtgcctatag gaaaccaaat tgtaaccgtt gaaagaggac
    10081 aaagattaac atctattttg accttgtctg acctttttaa ctggtcacga tttaaagtga
    10141 aaaccttcct tgacttactc gagagtgatg gaatgttaga agtcaaaaca acatcaaaat
    10201 atacccttat aaccattgtc aattatgact tttatcaaag tgagcagggc aggaaccaac
    10261 atcaaaacga catcaaacca acatcaaaac aacatcagtc aaacatcaac ccaacatcaa
    10321 aacaacatca aaccaacaca aacaataatg ataataaaga taataatgaa aagaatgtga
    10381 ataatgagaa gaagaaggta accgccttcg acttcttcca agataacgga ttcggtttca
    10441 taactcctta caatttagac gatttaaatt actatcttga ttcatttgaa aatgattcag
    10501 atgaaatggt taccgcatca cttaaaatcg ctaaagacag aaacaaggtt acttggggat
    10561 atgctaaaag cattttgaat acttggctta atgcaaactt gaaatctatt gaacaagtac
    10621 gtgcatttga aaagcaacaa cttgaaagca aaaaacaaaa ttataaacct ttcgttaaac
    10681 aatcaaaaga aaaaacaccc aaatggctca cagacagcac gagagaaacg aaaacgccgg
    10741 aagtagatga aaaccttgag aaagacagag aagcttttat taagcgtcta aatagcaaat
    10801 gggagtgatt gaaaatggat gcatttgata aatactatct atttgatcat gacggcaaca
    10861 aaatgttttc agttacacca cattttaaag atggacggca tttagttgtt ggattaaaac
    10921 atacaaaatt caatggtcga cgttggtact tagatgatta tgaattaaaa acacttattg
    10981 ataatgaaca aatggagtta ggacaccaaa caagcttatt tgaatatata tgagggatta
    11041 catggagata gaaattaaat ttaacgaaac tttcgaggca cctatgggct cgcctcgacc
    11101 gcgttttagc acaaaaggta gatatgcaca cacatatatg cctacaaaat atacagaaca
    11161 taaaaaatat ttacaaaatc aaatgccaaa gctaaatcta gaaaatgcat taaaaattga
    11221 attagagttt tactttactc cacctaaatc atggtcgaag aaaaagaaaa ctcaagcgat
    11281 tggacaatta aaagtaacta aaccagatat cgataatttg atgaagacag ttctagacgc
    11341 ttgtaacaat tatttgtgga aagatgacaa tcaaattgca gaaataacta gctcaaagcg
    11401 ttatggaatt gagcccaaaa taatcatacg aatagaagaa atataagagg tggataaaat
    11461 ggcgagaaaa gcaaggattg taacaataaa tgataaacca tataggttta ccaaatctga
    11521 aatggaatta atagaaagtc acggtataac cgctggaatg gtttctaaga gagtaaaaga
    11581 cggttgggaa ctacatgaag caatggacgc accagaaggt acgcgtttaa gcgagtacag
    11641 agaaaagaaa acaatagaaa gactggaaca agctagactc gaacgcaaat tggaaagaaa
    11701 gcgaaagaaa gaggctgagc taagaagaaa gaagccacat ttgtttaatg tgcctcagaa
    11761 acatccaaga ggacgttatg cgtgctacct gatggaaaac gacatattcg tgaaagttaa
    11821 gaagtagatc atgacagata acgcacgcaa agaataccta aatcaattct ttggatctaa
    11881 gagatatctg tatcaagata acgaacgagt ggcacatatc catgtagcaa acggcaatta
    11941 ttactttcac gggcatatcg taccaggttg gcaaggcgta aagaagacgt ttgatacagc
    12001 cgaagagcta gaaatatata taaagcaaca tggtttggaa tacgagaaac agaagcaact
    12061 aactttattt tagaggagat ggaaatgatg aataaccgcg aacaaattga acagtccgtt
    12121 ataagtgcta gtgcgtataa cggtaatgac acagagggat tactaaaaga gattgaggac
    12181 gtatataaga aagcgcaagc gtttgatgaa atacttaagg gtttacctaa tgctatgcaa
    12241 gatgcactca aagaagatat tggtcttgat gaggcagtag ggattatgac gggtcaagtg
    12301 gtctataaat atgaggaggc acaggaaaat gaataacaca ttaacaattg atcaattaca
    12361 agagttatta caaatacaaa aggagttcga cgatagaata ccaacgctga acttacgaga
    12421 tagcaaaata gcatatgtag ttgaattctt tgaatggttt aatacattgg aaacgtttaa
    12481 gaactggaag aagaaaccag gtaagccgtt agacgtacaa cttgatgaat tagctgacat
    12541 gttggcgttt ggattgagta ttgcgaatca agtaggagtg tcatcagaag agataaaaga
    12601 agcgattgaa tcaagtttta aagatacaga atttcacaaa atgtttaatt ttaaagataa
    12661 agaatttgct caagacgcag ttgttagtac accacagata atattcaaag aattttatcc
    12721 cgaccaacaa gcaattgtta tagtgataga catagcttac aacttatatt ctatcgacca
    12781 actcattgac gcatacaaaa agaaaatgaa aaggaaccac gaaagacaag atggaacagc
    12841 agacgcagga aaaggatacg tgtaaagaca tcttagatcg agtcaaggag gttttgggga
    12901 agtgagcgac atgttagaaa tatttttaat agggtttggc gtttatctct tttatcgcat
    12961 agcaattatt tttcttaaga gtaaaaagac tatacacaca aacatatatg aaatgttaat
    13021 gcttgctact atctttatga tatctacatt tgcttataaa catcaaaaga cgcatatctt
    13081 aatagcattt ttagtaatgt tttttatgag taagctcaaa caagttcaag ggagctatga
    13141 ggaatgacac aatacttagt cacaacattc aaagattcaa caggacgtaa acatacacac
    13201 ataactaaag ctaagagtaa tcaaaggttt acagttgttg aggcagagag taaagaagaa
    13261 gcgaaagaga agtacgagaa acaagttaaa agggatgcag ttattaaagt gggtcagttg
    13321 tttgaaaata taagggagtg tgggaaatga ttaaaaaact taaaaatatg gatgggttcg
    13381 acatctttat tgttggaata ctgtcattat tcggtataac cgcattgcta cttgttgtcg
    13441 cattgcctat ctatacagtg gctagttacc aaaacaaaga agtacatcaa gggacaatta
    13501 cagataaata taacaaaaga caagataaag aggacaaatt ctatattgta ttagatgata
    13561 aacaagtcat cgaaaactca gacttattct tcaaaggaaa gtttgatagc gcagacatac
    13621 aagctaggtt aaaagtaggt gataaagtaa aagttaagac gattggatat agaatacact
    13681 ttttaaattt atatccggtc ttatacgaag taaagaaggt agataaaaaa tgattaagca
    13741 aatactaaga ttattattct tactagcgat gtatgagtta ggtaagtatg taactgagca
    13801 agtatatatt atgatgacgg ctaatgatga tgtagaggcg ccgagtgatt acgtctttcg
    13861 agcggaggta agtgagtgat gtggattact atgactattg tatttgctat attgctatta
    13921 gtttgtatca gtattaatag tgatcgtgca agggagatac aagcgctcag atatatgaat
    13981 gattatctac ttgatgaagt agttaaaact aaaggataca acgggttaaa agaatacagg
    14041 attgaattaa agcgaatgaa taacgatatt aaaaagtaat ttatattatc ggaggtattg
    14101 cattgaatga taaagattga gaaacacgat atcaaaaagc ttgaagaata cattcagcac
    14161 atcgataact atcgaagaga gttgaagatg cgagaatatg aattacttga aagtcatgaa
    14221 ccagataatg cgggagctgg caaaagtaat ttgccgggta acccgattga acgatgtgca
    14281 ataaagaagt ttagtgataa caggtacaat acattaagaa atatagttaa cggtgtagat
    14341 agattgatag atgaaagtga tgaggatacg cttgagttat taaggtttag atattgggat
    14401 tgtcctattg gttgttatga atgggaagat atagcacatt actttggtac aagtaagaca
    14461 agtatattac gtagaaggaa tgcactgatc gataagttag caaagtatat tggttatgtg
    14521 tagcggactt ttaccctatg taagtccgca ttaaaacagt ttattatgtt agtatcagat
    14581 taatatttaa agttattaaa tgctaatacg acgcatgaac aagaggcgca tcactatgtg
    14641 atgtgtcttt ttatttatga ggtatgaaca tgttcaaact aatagtaaat acattactac
    14701 acatcaagta tagatgagtc ttgatactac ttaagttata taaggtgaaa cattatgatg
    14761 actaaagacg aacgcatacg attctataag tctaaagaat ggcaaacaac aagaaaaaga
    14821 gtgctagaaa gagataatta tgaatgtcaa caatgtaaga gagacggcaa gttaacgaca
    14881 tatgacaaaa gcaagcgtaa gtcgttggat gtagatcata tattatcgct agaacatcat
    14941 ccggagtttg ctcatgactt aaacaattta gaaacactgt gtattaaatg tcacaacaaa
    15001 aaagaaaaga gatttataaa aaaagaaaat aaatggaaag acgaaaaatg gtaaataccc
    15061 ccgggtcaaa aaaatcaaaa gcgatcaaaa tacttgggga acgggcaggg gctcgacttc
    15121 gcgataattt taaaaatcca tgtataaccc ccctcttata accattttaa ggcaggtgat
    15181 gaaatggaga ttatagttga tgaaaactta gtgcttaaag aaaaagaaag gctgcaagta
    15241 ttatataaag acatacctag caataaatta aaagtagttg atggtttaat tattcaagca
    15301 gcaaggctac gtgtaatgct tgattacatg tgggaagaca taaaagaaaa aggtgactat
    15361 gatttattta ctcaatctga aaaggcgcca ccatatgaaa gggaaagacc agtagccaaa
    15421 ctatttaatg ctagagatgc tgcatatcaa aaaataatca aacaattatc ggatttattg
    15481 cccgaagaga aagaagacac agaaacgcca tctgatgatt acctatgatt agtaataaat
    15541 acgttgatga atatataaat ttgtggaaac aaggaaagat aattttaaat aaagaaagaa
    15601 ttgatctctt taattatcta caaaaacata tatattcacg agatgatgta tattttgatg
    15661 aacagaaaat cgaggattgt atcaaattta ttgaaaaatg gtattttcca acattaccat
    15721 ttcaaaggtt tatcatagct aatatatttc ttatagataa aaatacagat gaagctttct
    15781 ttacagaatt tgctattttc atgggacgtg gaggcgggaa aaacggtcta ataagtgcta
    15841 ttagtgattt tctttctacg cccttacacg gagttaaaga atatcacatc tccattgttg
    15901 ctaatagtga agatcaagca aaaacatcgt ttgatgaaat cagaaccgtt ttaatggata
    15961 acaaacgaaa taagacgggt aaaacgccaa aagctcctta tgaagttagt aaagcaaaaa
    16021 taataaaccg tgcaactaaa tcggttattc gatataacac atcaaacaca aaaaccaaag
    16081 acggtggacg tgaggggtgt gttatttttg atgaaattca ttatttcttt ggtcctgaaa
    16141 tggtaaatgt caaacgtggt ggattaggta aaaagaaaaa tagaagaacg ttttatataa
    16201 gtactgatgg ttttgttaga gagggttata tcgatgcaat gaagcacaaa attgcaagtg
    16261 tattaagtgg caaggttaaa aatagtagat tgtttgcttt ttattgtaag ttagacgatc
    16321 caaaagaagt tgatgacaga cagacgtggg aaaaggcgaa cccaatgtta cataaaccgt
    16381 tatcagaata cgctaaaaca ctgctaagca cgattgaaga agaatataac gatttaccat
    16441 tcaaccgttc aaataagccc gaattcatga ctaagcgaat gaatttgcct gaagttgacc
    16501 ttgaaaaagt aatagcacca tggaaagaaa tactagcgac taatagagag ataccaaatt
    16561 tagataatca aatgtgtatt ggtggtttag actttgcaaa cattcgagat tttgcaagtg
    16621 tagggctatt attccgaaaa aacgatgatt acatttggtt aggacattcg tttgtaagac
    16681 aagggttttt ggatgatgtc aaattagaac ctcctattaa agaatgggaa aaaatgggat
    16741 tattgaccat tgtcgatgat gatgtcattg aaattgaata tatagttgat tggtttttaa
    16801 aggctagaga aaaatatggg cttgaaaaag tcatagctga taattataga actgatattg
    16861 taagacgtgc gtttgaggat gctggcataa aacttgaagt acttagaaat ccaaaagcaa
    16921 tacatggatt acttgcacca cgtatcgata caatgtttgc gaaacataac gtaatatatg
    16981 gagacaatcc tttgatgcgt tggtttacta ataatgttgc agtaaaggtt aaacccgatg
    17041 gtaataaaga atatattaaa aaagatgaaa atagaagaaa aaccgatggg ttcatggctt
    17101 ttgttcacgc attatataga gcagacgata tagtagacaa agacatgtct aaagcgcttg
    17161 atgcattaat gagtatagat ttctaataga ggaggtgaga catgagtatt ctagaaaaga
    17221 tatttaaaac taggaaagat ataacatata tgcttgattt agatatgata gaagatctat
    17281 cacaacaagc gtatgtgaaa cgtttagcga ttgatagttg tattgaattt gttgcgcgag
    17341 ctgtcgctca aagtcatttt aaagtattgg aaggtaatag aattcaaaag aatgatgttt
    17401 actacaagtt aaatataaaa ccaaatactg acttatcaag cgatagtttt tggcaacaag
    17461 ttatatataa actaatttat gataacgagg ttttaatcgt agtaagtgac agcaaagaat
    17521 tacttatcgc agatagcttt tacagagaag agtacgcttt gtatgatgat atattcaaag
    17581 atgtaacggt taaagattat acttatcaac gtactttcac aatgcaagag gtcatatatt
    17641 taaagtacaa caacaataaa gtgacacact ttgtagaaag tctattcgaa gattacggga
    17701 aaatattcgg aagaatgata ggtgcacaat taaaaaacta tcaaataaga gggattttga
    17761 aatctgcctc tagcgcatat gacgaaaaga atatagaaaa attacaagcg ttcacaaata
    17821 aattattcaa tacttttaat aaaaatcaac tagcaatcgc gcctttgata gaaggttttg
    17881 attatgagga attatctaat ggtggtaaga atagtaacat gcctttttct gaattgagtg
    17941 agctaatgag agatgcaata aaaaatgttg cgttgatgat tggtatacct ccaggtttga
    18001 tttacggaga aacagctgat ttggaaaaaa acacgcttgt atttgagaag ttctgtttaa
    18061 cacctttatt aaaaaagatt cagaacgaat taaacgcgaa actcataaca caaagcatgt
    18121 atttgaaaga tacaagaata gaaattgtcg gtgtgaataa aaaagaccca cttcaatatg
    18181 ctgaagcaat tgacaaactt gtaagttctg gttcatttac aaggaatgag gtgcggatta
    18241 tgttaggtga agaaccatca gacaatcctg aattagacga atacctgatt actaaaaact
    18301 acgaaaaagc taacagtggt gaaaatgatg aaaaagaaaa agatgaaaac actttgaaag
    18361 gtggtgatga agatgaaagc ggagattaaa ggcgtcatcg tttccaacga agataaatgg
    18421 gtttacgaaa tgcttggtat ggattcgact tgtcctaaag atgttttaac acaactagaa
    18481 tttagtgatg aagatgttga tattataatt aactcaaatg gtggtaacct agtagctggt
    18541 agtgaaatat atacacattt aagagctcat aaaggcaaag tgaatgttcg tatcacagca
    18601 atagcagcaa gtgcggcatc gcttatcgca atggctggtg accacatcga aatgagtccg
    18661 gttgctagaa tgatgattca caatccttca agtattgcgc aaggagaagc gaaagatcta
    18721 aatcatgctg cagaaacatt agaacatgtt ggtcaaataa tggctgaggc atatgcggtt
    18781 agagctggta aaaacaaaca agaacttgta gaaatgatgg ctagggaaac gtggctaaat
    18841 gctgatgaag ccattgaaca aggttttgcg gatagtaaaa tgtttgaaaa cgacaatatg
    18901 caaattgtag caaacaatac acaagtgtta tcgaaagatg tattaaatcg tgtaacagct
    18961 ttggtaagta aaacgccaga ggttaacatt gatattgacg caatagcaaa taaagtaatt
    19021 gaaaaaataa atatgaaaga aaaggaatca gaaatcgatg ttgcagatag taaagtatca
    19081 gcaaatggat tttcaagatt ccttttttaa tacaaaaaat aggaggtcat aaaatgacta
    19141 taaatttatc ggaaactttc gcaaatgcga aaaacgaatt tattaatgca gtaaacaacg
    19201 gtgaaccgca agaaagacaa aatgaattgt acggtgacat gattaaccaa ctatttgaag
    19261 aaactaaatt acaagcaaaa gcagaagctg aaagagtttc tagtttacct aaatcagcac
    19321 aatctttgag tgcaaaccaa agaagtttct tcatggatat caataaaaac gttaactata
    19381 aagaagaaaa acttttgcca gaagaaacaa ttgatagaat ttttgaagat ttgacgacga
    19441 atcatccgtt attagctgat ttaggtatta aaaacgctgg tttgcgtttg aagttcttaa
    19501 aatctgaaac ttctggcgta gccgtttggg gtaaaatcta tggtgaaatt aaaggtcaat
    19561 tagatgctgc gttcagtgaa gaaacagcaa ttcaaaataa attgacagcg tttgttgttt
    19621 taccaaaaga tttaaatgat tttggtcctg cgtggattga aagatttgtt cgtgttcaaa
    19681 tcgaagaagc atttgcagtg gcgcttgaaa ctgcgttctt aaaaggtact ggtaaagacc
    19741 aaccaatcgg cttaaaccgt caagtacaaa aaggtgtatc ggtaactgag ggtgcttatc
    19801 cagagaaaga agaacaaggt acgcttacat ttgctaatcc gcgcgctacg gttaatgaat
    19861 tgacgcaagt gtttaaatac cactcaacta acgagaaagg taaatcagta gcggttaaag
    19921 gtaatgtaac aatggttgtt aatccgtccg atgcttttga ggttcaagca cagtatacac
    19981 atttaaatgc aaatggcgta tatgttactg ctttaccatt taatttgaat gttatcgagt
    20041 ctacagtcca agaagcaggt aaggttttaa cgtacgttaa aggtttatat gatggttatt
    20101 tagctggtgg tattaatgtt cagaaattta aagaaacact tgcgttagat gatatggatt
    20161 tatacactgc aaaacaattt gcttacggca aagcgaaaga taataaagtt gctgctgttt
    20221 ggaaattaga tttaaaagga cataagccag ctttagaagg taccgaagaa acactataaa
    20281 attttatgag gtgataaaat ggtgaaattt aaagttgtta gagcttttaa agacatagag
    20341 cacaatcaac acaagtacaa agtaggggag ttgtatccag ctgaagggta taacaatcct
    20401 cgtgttgaat tgttgacaaa tcaaatcaaa aataagtacg acaaagttta tatcgtacct
    20461 ttagataagc tgacaaaaca agaattatta gaactatgcg aatcattaca aaaaaagcgt
    20521 ctagttcaat ggttaaaagt gaaatcgtcg acttattgaa tggtgaagac aatgacgatt
    20581 gatgatttgc ttgtcaaatt taaatcactt gaaaagattg accataattc agaggatgag
    20641 tacttaaagc agttgttaaa aatgtcgtac gagcgtataa aaaatcagtg cggagttttt
    20701 gaattagaga atttaatagg tcaagaattg atacttatac gcgctagata tgcttatcaa
    20761 gatttattag aacacttcaa cgataattac agacctgaaa taatagattt ttcgttatct
    20821 ctaatggagg tatcagaaga tgaagaaagt gtttaaaaaa cctagaatta caactaaacg
    20881 tttaaatact cgtgttcatt tttataagta tactgaaaat aatggtccag aagctggaga
    20941 aaaagaagaa aaattattat atagctgttg ggcgagtatt gatggtgtct ggttacgtga
    21001 attagaacaa gctatctcaa acggaaccca aaatgacatt aaattgtata ttcgtgatcc
    21061 gcaaggtgat tatttaccca gtgaagaaca ttatcttgaa attgaatcaa gatatttcaa
    21121 aaatcgtttg aatataaagc aagtatcacc agatttggat aataaagact ttattatgat
    21181 tcgtggagga tatagttcat gagtgtgaaa gtgataggtg ataaagcatt agaaagagaa
    21241 ttagaaaaac gttttggcat aaaagagatg gtaaaagttc aagataaggc gttaatagct
    21301 ggtgctaagg taattgttga agaagtaaaa aaacaactaa agccctcaaa agatacggga
    21361 gcattaatta atgaggtaag ttttagtaaa cctgaatgga taaacggaaa acgtacaatt
    21421 actgttcatt ggcgaggttc taaagaccgt tataaaatcg tacatttaat tgaatatgga
    21481 cacgttcaaa aaggaacagg taaatttatc aaacctaaag ctatgggcgg tgttaataga
    21541 gcaataagac aagggcaaaa taagtatttt gagacgctaa aaagggagtt gaaaaaattg
    21601 tgattgatat tttgtacaaa gttcatgaag tgattagtca agacagaatt attagagagc
    21661 acgtaaatat caataatatt aagttcaata aataccctaa tgtaaaagat actgatgtac
    21721 cttttattgt tattgacgat atcgacgacc caatacctac aacttatact gacggagatg
    21781 agtgtgcata tagttatatt gtccaaatag atgtttttgt taagtacaat gatgaatata
    21841 atgcgagaat cataagaaat aagatatcta atcgcattca aaagttatta tggtctgaac
    21901 taaaaatggg aaatgtttca aatggaaaac cggaatatat agaagaattt aaaacatata
    21961 gaagctctcg cgtttacgag ggcatttttt ataaggagga aaattaaatg gcagtaaaac
    22021 atgcaagtgc gccaaaggcg tatattaaca ttactggttt aggtttcgct aaattaacga
    22081 aagaaggcgc ggaattaaaa tatagtgata ttacaaaaac aagaggatta caaaaaattg
    22141 gtgttgaaac tggaggagac ttgaaaacag catatgctga tggtggtcca atcgaatcag
    22201 ggaacacaga cggagaaggt aaaatttcgt tacaaatgca tgctttccct aaagagattc
    22261 gcaaaatagt attcaatgaa gagtatgatg aagacggtgt ttataaagaa actcaaggta
    22321 aacaaaacaa ctatgtagca atttggttca gacaagagcg tcgagacggc acatttagaa
    22381 cggttttatt acctaaagtc atgtttacaa atcctaaaat cgatggagaa acggctgaga
    22441 aagattggga tttctcaagt gaagaggttg aaggtgaggc acttttccct ttagttgata
    22501 ataaaaagtc agtacgtaag tatatctttg attcagctaa catgacaaat catgatggag
    22561 acggtgaaaa aggcgaagag gctttcttaa agaaaatttt aggcgaagaa tatactggaa
    22621 acgtgacaga gggtaacgaa gaaactttgt aacaaaaccg gcttcatcgg aaactgcggt
    22681 aaagtcggtt aatataccag atagcattaa aacacttaaa gttggcgaca catacgattt
    22741 aaatgttgta gtagagccat ctaatcaaag taagttattg aaatacacaa cagatcaaac
    22801 gaatattgta tcaatcaata gtgatggtca agttactgcg gaagcacaag gcattgctac
    22861 ggttaaagca acagttggta atatgagtga cactataaca ataaatgtag aagcataaga
    22921 gggggcaacc cctctatttt atttgaaaat aaggagagta ttataaaatg gcaaaattaa
    22981 aacgtaacat tattcaatta gtagaagacc cgaaagcaaa tgaaattaaa ttacaaacgt
    23041 acttaacacc acacttcatt tcatttgaaa ttgtatacga agcaatggat ttaatcgatg
    23101 atattgagga cgaaaatagc acgatgaaac caagagaaat cgctgacaga ttgatggata
    23161 tggttgtaaa aatttacgat aaccaattca cagttaaaga cctaaaagaa cgtatgcatg
    23221 cacctgatgg aatgaatgca cttcgtgaac aagtgatttt cattactcaa ggtcagcaaa
    23281 ctgaggaaac tagaaatttt atccagaaca tgaaataaag cctgaagatt taacatataa
    23341 agcaatgttg aaaaatatgg atactctcat gatggactta attgaaaatg gtaaagacgc
    23401 taacgaagtt ttaaaaatgc catttcatta tgtactttcc atatatcaaa ataaaaacaa
    23461 tgacatttct gaagaaaaag cagaggcttt aattgatgcg ttttaacctt aaccgtttgg
    23521 ttagggttat ttttttgaac ttttttagaa aggaggtaaa aaatgggaga aagaataaaa
    23581 ggtttatcta taggtttgga tttagatgca gcaaatttaa atagatcatt tgcagaaatc
    23641 aaacgaaact ttaaaacttt aaattctgac ttaaaattaa ccggtaacaa cttcaaatat
    23701 accgaaaaat caactcatag ttacaaacaa aggattaaag aacttgatgg aactatcaca
    23761 ggttataaga aaaacgttga tgatttagcc aagcaatatg gcaaggtatc tcaagaacag
    23821 ggcgaaaaca gcgcggaagc tcaaaaatta cgacaagaat ataacaaaca agcaaatgag
    23881 ctgaattttt tagaaaaaga actagaaaaa acaacaactg agtttgaaga gttcaaaaaa
    23941 gctcaagttg aagctcaaag aatggcagaa agtggctggg gaaaaaccag taaagttttt
    24001 gaaagtatgg gacctaaatt aacaaaaatg ggtgatggtt taaaatccat tggtaaaggt
    24061 ttgatgattg gtgtaactgc acctgtttta ggtattgcag cagcatcagg aaaagctttt
    24121 gcagaagttg ataaaggttt agatacagtt acccaagcaa caggagcaac cggcggagag
    24181 cttaagaagt tgcagaattc atttaaagat gtttatggca actttccagc agacgctgag
    24241 actgtaggcg gtgttttagg ggaagttaac acaaggttag gtttcactgg caaagaactt
    24301 gagagtgcca cagagtcatt cttgaaattt agtcacataa caggttctga cggcgtacaa
    24361 gccgttcaat taattacgcg tgcaatgggt gatgcaggta ttgaagctga tgagtatcaa
    24421 agtgtacttg atatggtagc gaaagcagca caggctagcg gtataagtgt tgatacatta
    24481 gctgatagca ttactaaata cggtgctcca atgagggcta tgggctttga gatgaaagaa
    24541 tcaatcgctt tattctctca atgggagaaa tcaggtgtta atactgaaat agccttcagt
    24601 ggtttgaaaa aagctatatc caattggggt aaagcgggta aagacccaag agaagaattt
    24661 aagaagacat tagcagaaat tgaaaggaca ccggatatag ctagcgcaac aagtttagcg
    24721 attgaagcat ttggtgcaaa agcaggtcct gatttagcag atgctattaa aggcggtcgc
    24781 tttagttacc aagagttctt aaaaactatc gaagattcgc aaggaacggt caatcagaca
    24841 tttaaagatt ctgaaagtgg ctccgaaaga tttaaagtag caatgaataa acttaaatta
    24901 gtaggtgctg atgtatgggc ttctattgaa agtgcgtttg ctccagtcat ggaagaatta
    24961 atcaaaaagc tatctgtagc agttgattgg ttttcaagtt taagtgatgg atctaaaagg
    25021 tcgattgtta tattcggtgg tattgctgct gcaattggtc ctgtagtttt tggattaggt
    25081 gcattcataa gcacaattgg caacgcagta actgtattag ctccattatt agctagtatt
    25141 gtaaaggctg gcggattgat tagtttttta tcaactaaag tgcctatttt aggaacagtc
    25201 ttcacagcat taactggtcc aattggtatc gtgttaggtg tactggctgg tttagcagtc
    25261 gcatttacaa tagcttataa gaaatctgaa acattcagaa attttgttaa tggtgcaatt
    25321 aacagtgtta aacaaacgtt tagtaatttc attcaattta tccaaccttt cattgattcc
    25381 gttaaaaacg tctttgaaca agcggtttca gcaatcgttg atttcgctaa agatatttgg
    25441 agtcaaatta atggattctt taatgaaaac ggaatttcta ttgttcaagc gcttcaaaat
    25501 atatgcaatt ttatcaaagc tatatttgaa tttatcttaa attttgtaat taaaccaatc
    25561 atgtttgcga tttggcaagt gatgcaattt atttggccgg cggttaaagc cttgattgtc
    25621 agtacttggg agaatataaa aggagtaata caaggtgctt taaatatcat acttggcttt
    25681 attaagttct tttcaagttt attcactggt aattggcgag gtgtttggga cggtattgtg
    25741 atgatactaa aaggcactgt gcagttaatt tggaatttaa tacaactgtg gtttgtaggt
    25801 aagattctag gtgttgttag atactttggt ggattgctta aaggtttaat atccggtatc
    25861 tggggtgtta tcaaaggtat tttcacaaaa tcattatctg caatttggaa tgcaacgaaa
    25921 agtatttttg gtttcttata caatagtgtt aaatctattt tcactaatat gaaaaactgg
    25981 ttatctagta cgtggaataa tatcaaaagc aataccgtcg gcaaggctca ttcgttattt
    26041 acgggtgtaa ggtctaaatt cacaagttta tggaatgcga cgaaagatat atttactaaa
    26101 ttaagaaatt ggatgtcaaa catctggaac tctattaaag ataacacggt aggtatagcg
    26161 ggtcgcttat gggatagagt gcgtaacatc tttggaagca tgcgtgacgg tttaaaatct
    26221 atcattagta aaattaaaga tcatatcggt ggtatggtag acgctgttaa aagaggtctt
    26281 aataaattaa ttgaaggttt aaactgggtc ggtggtaagt tgggtatgga caaaataccg
    26341 aagttacaca ctggtactga acatacacat actactacaa gattagttaa gaacggtaag
    26401 attgcacgtg acacattcgc tacagttggg gataagggac gcggaaatgg tccaaatggt
    26461 ttcagaaatg aaatgattga attccctaat ggtaaacgtg taatcacacc aaatacagat
    26521 actacggctt atttacctaa aggctcaaaa gtatacaacg gggcacaaac ttattcaatg
    26581 ttaaacggaa cgcttccgag atttcatttc ggtactacta tgtggaaaga tattaaatct
    26641 agtgcatcat cggcatttaa ctggacaaaa gatcaaatag gtaaaggtac caaatggctt
    26701 ggcgataaag ttggcgatgt aatggacttt attgataatc cgggtaagct tttaaattat
    26761 gtgctcaaag cgtttggtgt tgactttagc tctctaacta aaggtatggg tattgttggc
    26821 gatataacaa aagcgtcttg gaataagatt aaaagtaagg cgattaattg gataaaagaa
    26881 ggattagaga gccaagcggg agatggttct gtgtttgata gtttcagaat actacaacct
    26941 tattcagcac cgccaaaacc tcctaacccc aattatccat ttaacggagg cgttcatcat
    27001 ggtgttgact atgatacgcc gaccggtacc cctatacgta cgccaatggg tggacgtgtt
    27061 agaagttggt atgacaacta tggtggcggt aaagcaatta ctgttcaaaa aggtcgaaca
    27121 tttttgtggt tcatgcactt atctgaacaa ttgcgtagaa caggtgaaca aattaaagct
    27181 ggtcaattaa ttggtaaatc aggtaataca ggttctatga ctaattaccg ccatttacat
    27241 ttccaagtca atcaaggcgg agagtccaat aggtattcga cagaccctat tccttggtta
    27301 cggaaaaacg acaaaactgg tggaaagaat tcacctggag ggagtggttc tgaaaatgcg
    27361 cgcagagcga ttagaacagc tcaaaatata cttggaggtc aatacaaagc tagctggatt
    27421 acacacgaaa tgatgcgtgt agcaagacgt gaatccaatt atacagctaa tgcagttaat
    27481 aattgggata gcaacgcaag agctggtaca ccttcaagag gtatgttcca aatgatagat
    27541 ccttcattta gagcgtacgc aaagtcgggt tacaataatc ctcttaaccc aactcatcaa
    27601 gctatatcgg ctatgagata tattgtgggt aaatgggtac caagaacggg ctcatggaga
    27661 gctgcgttca aacgcgctgg tgattacgca tatgctactg gtggcaaagt ctacaacgga
    27721 ttgtaccact taggagaaga aggatatcca gagtgggtta ttcctactga tcctgcacgt
    27781 aaaaacgaag caatgaagat gttacattat gcagcagcag aagtaagagg gagaaaagcg
    27841 agtaaaaata agcgtcctag tcaattgtct agtgtaaatg ggtttgatga cccaagctta
    27901 ttattgaaaa tgattgaaca acagcaacaa caaatagctt tattactgaa aatagcgcaa
    27961 tccaacgatg tgattgcaga taaagattat cagccgatta ttgacgaata cgcttttgat
    28021 aaaaaggtga acgcgtctat agaaaagcga gaaaggcaag aatcaacaaa agtaaagttt
    28081 agaaaaggag gaattgctat tcaatgatag acactattaa agtgaacaac aaaacaattc
    28141 cttggttgta tgtcgaaaga gggtttgaaa taccctcttt taattatgtt ttaaaaactg
    28201 aaaatgtaga tggacgttcg gggtctatat ataaagggcg taggcttgaa tcttatagtt
    28261 ttgatatacc tttggtggta cgtaatgact atttatctca caacggcttt aaaacacatg
    28321 atgacgtctt gaatgaatta gtaaagtttt ttaactacga ggaacaagtt aaattacaat
    28381 tcaaatctaa agattggtac tggaacgctt attttgaagg accaataaag ctgcacaaag
    28441 aatttgcaat acctgttaag ttcactatca aagtagtact aacagaccct tacaaatatt
    28501 cagtaacagg atataaaaat actgcgattt cagaccaagt ttcagttgta aatagtggga
    28561 ctgctgacac tcctttaatt gttgaagccc gagcaattaa accatctagt tactttatga
    28621 tcactaaaaa tgatgaagat tattttatgg ttggtgatga tgaggtaacc aaagaagtta
    28681 aggattacat gcctcctgtt tatcatagtg agtttcgtga tttcaaaggt tggactaaga
    28741 tgattactga agatattcca agtaatgatt taggtggtaa agtcggcggt gactttgtga
    28801 tatccaatct tggcgaagga tataaagcaa ctaattttcc tgatgcaaaa ggttgggttg
    28861 gtgctggcac gaaacgaggg ctccctaaag cgatgacaga ttttcaaatt acctataaat
    28921 gtattgttga acaaaaaggt aaaggtgccg gaagaacagc acaacatatt tatgatagtg
    28981 atggtaagtt acttgcttct attggttatg aaaataaata tcatgataga aaaataggac
    29041 atattgttgt tacgttgtat aaccaaaaag gagaccccaa aaagatatac gactatcaga
    29101 ataaaccgat aatgtataac ttggacagaa tcgttgttta tatgcggctc agaagagtag
    29161 gtaataaatt ttctattaaa acttggaaat ttgatcacat taaagaccca gatagacgta
    29221 aacctattga tatggatgag aaagagtgga tagatggcgg taagttttat cagcgtccag
    29281 cttctatcat agctatctat agtgcgaagt ataatggtta taagtggatg gagatgaatg
    29341 gattaggttc attcaatacg gagattctac caaaaccgaa aggcgcaagg gatgtcatta
    29401 tacaaaaagg tgatttagtg aaaatagata tgcaagcaaa aagtgttgtc atcaatgagg
    29461 aaccaatgtt gagcgagaaa tcgtttggaa gtaattattt caatgttgat tctgggtaca
    29521 gtgaattaat catacaacct gaaaacgtct ttgatacgac ggttaaatgg caagatagat
    29581 atttatagaa aggagatgag agtgtgatac atgttttaga ttttaacgac aagattatag
    29641 atttcctttc tactgatgac ccttccttag ttagagcgat tcataaacgt aatgttaatg
    29701 acaattcaga aatgcttgaa ctgctcatat catcagaaag agctgaaaag ttccgtgaac
    29761 gacatcgtgt tattataagg gattcaaaca aacaatggcg tgaatttatt attaactggg
    29821 ttcaagatac gatggacggc tacacagaga tagaatgtat agcgtcttat cttgctgata
    29881 taacaacagc taaaccgtat gcaccaggca aatttgagaa aaagacaact tcagaagcat
    29941 tgaaagatgt gttgagcgat acaggttggg aagtttctga acaaaccgaa tacgatggct
    30001 tacgtactac gtcatggact tcttatcaaa ctagatatga agttttaaag caattatgta
    30061 caacctataa aatggtattg gatttttata tagagcttag ttctaatacc gtcaaaggta
    30121 gatatgtggt actcaaaaag aaaaacagct tattcaaagg taaagaaatt gagtatggta
    30181 aagatttggt tgggttaact aggaagattg atatgtcaga aatcaaaaca gcattaattg
    30241 ctgtgggacc cgaaaatgac aaaggaaagc gtttagagtt agttgtgact gatgacgaag
    30301 cacaaagtca attcaactta cctacccgtt atatttgggg aatatacgaa cctcaatcag
    30361 atgatcaaaa tatgaatgaa acacggttgc gttctttagc caaaacagag ttaaataaac
    30421 gtaagtcggc agttatgtca tatgagatta cttctactga tttggaagtt acgtatccgc
    30481 acgagattat atcaattggt gatacagtca gagtaaaaca tagagatttt aacccgccat
    30541 tgtatgtaga ggcagaagtt attgccgaag aatataacat aatttcagaa aatagcacat
    30601 atacattcgg tcaacctaaa gagttcaaag aatcagaatt acgagaagag tttaacaagc
    30661 gattgaacat aatacatcaa aagttaaacg ataatattag caatatcaac actatagtta
    30721 aagatgttgt agatggtgaa ttagaatact ttgaacacaa aatacacaaa agtgatacac
    30781 cgccagaaaa tccagtcaat gatatgcttt ggtatgatac aagtaaccct gatgttgctg
    30841 tcttgcgtag atattggaat ggtcgatgga ttgaagcaac accaaatgat gttgaaaaat
    30901 taggtggtat aacaagagag aaagcgctat tcagtgaatt aaacaatatt tttattaatt
    30961 tatctataca acacgctagt cttttgtcag aagctacaga attactgaat agcgagtact
    31021 tagtagataa tgatttgaaa gaggacttac aagcaagttt agacgctgtg attgatgttt
    31081 ataatcaaat taaaaataat ttagaatcta tgacacccga aactgcaacg attggtcggt
    31141 tggtagatac acaagcttta tttcttgagt atagaaagaa attacaagat gtttatacag
    31201 atgtagaaga tgtcaaaatg gccatttcag atagatttaa attattacag tcacaataca
    31261 ctgatgaaaa atataaagaa gcgttggaaa taatagcaac aaaatttggt ttaacggtga
    31321 atgaagattt gcagttagtc ggagaaccta atgttgttaa atcagctatt gaagcagcta
    31381 gagaatccac aaaagaacaa ttacgtgact atgtaaaaac atcggactat aaaacagaca
    31441 aagacggtat tgttgaacgt ttagatactg ctgaagctga gagaacgact ttaaaaggtg
    31501 aaatcaaaga taaagttacg ttaaacgaat atcgaaacgg attggaagaa caaaaacaat
    31561 atactgatga ccagttaagt gatttgtcca ataatcctga gattaaagca agtattgaac
    31621 aagcaaatca agaagcgcaa gaagctttaa aatcatacat tgatgctcaa gatgatctta
    31681 aagagaagga atcgcaagcg tatgctgatg gtaaaatttc ggaagaagag caacgcgcta
    31741 tacaagatgc tcaagctaaa cttgaagagg caaaacaaaa cgcagaacta aaggctagaa
    31801 acgctgaaaa gaaagctaat gcttatacag acaacaaggt caaagaaagc acagatgcac
    31861 agaggaaaac actgactcgc tatggttctc aaattataca aaatggtaag gaaatcaaat
    31921 taagaactac taaagaagag tttaatgcaa ccaatcgtac actttcaaat atattaaacg
    31981 agattgttca aaatgttaca gatggaacaa caatcagata tgatgataac ggagtggctc
    32041 aagctttgaa tgtggggcca cgtggtatta gattaaatgc tgataaaatt gatattaacg
    32101 gtaatagaga aataaacctt cttatccaaa atatgcgaga taaagtagat aaaaccgata
    32161 ttgtcaacag ccttaattta tcaagagagg gtcttgatat caatgttaat agaattggaa
    32221 ttaaaggcgg tgacaataac agatatgttc aaatacagaa tgattctatt gaactaggtg
    32281 gtattgtgca acgtacttgg agagggaaac gttcaacaga cgatattttt acgcgactga
    32341 aagacggtca cctgagattt agaaataaca ccgctggcgg ttcactttat atgtcacatt
    32401 ttggtatttc gacttatatt gatggtgaag gtgaagacgg tggttcatct ggtacgattc
    32461 aatggtggga taaaacttac agtgatagtg gcatgaatgg tataacaatc aattcctatg
    32521 gtggtgtcgt tgcactaacg tcagataata atcgggttgt tctggagtct tacgcttcat
    32581 cgaatatcaa aagcaaacag gcaccggtgt atttatatcc aaacacagac aaagtgcctg
    32641 gattaaaccg atttgcattc acgctgtcta atgcagataa tgcttattcg agtgacggtt
    32701 atattatgtt tggttctgat gagaactatg attacggtgc gggtatcagg ttttctaaag
    32761 aaagaaataa aggtcttgtt caaattgtta atggacgata tgcaacaggt ggagatacaa
    32821 caatcgaagc agggtatggc aaatttaata tgctgaaacg acgtgatggt aataggtata
    32881 ttcatataca gagtacagac ctactgtctg taggttcaga tgatgcagga gataggatag
    32941 cttctaactc aatttataga cgtacttatt cggccacagc taatttgcat attacttctg
    33001 ctggcacaat tgggcgttcg acatcagcgc gtaaatacaa gttatctatc gaaaatcaat
    33061 ataacgatag agatgaacaa ctggaacatt caaaagctat tcttaactta cctattagaa
    33121 cgtggtttga taaagctgag tctgaaattt tagctagaga gctgagagaa gatagaaaat
    33181 tatcggaaga cacctataaa cttgatagat acgtaggttt gattgctgaa gaggtggaga
    33241 atttaggatt aaaagagttt gtcacgtatg atgacaaagg agaaattgaa ggtatagcgt
    33301 atgatcgtct atggattcat cttatccctg ttatcaaaga acaacaacta agaatcaaga
    33361 aattggagga gtcaaagaat gaaggataac aaacaaggat tacaagctaa tcctgaatat
    33421 acaattcatt atttatcaca ggaaattatg aggttaacac aagaaaacgc gatgttaaaa
    33481 gcgtatatac aagaaaataa agaaaatcaa caatgtgctg aggaagagta atccttagca
    33541 ctatttttat acaaaaattt aaggaggtca tttaattatg gcaaaagaaa ttatcaacaa
    33601 tacagaaagg tttattttag tacaaatcga caaagaaggt acagaacgtg tagtatatca
    33661 agatttcaca ggaagtttta caacgtccga ttcagcaagt tatgcacaag attttaaatc
    33721 tgaggaaaac gctaaaaaga ttgctgaaac tttaaatctt ttatatcaat taacaggcaa
    33781 tcaaaacggt gtgaaagttg tgaaagaagt tgtggataga actgacttgt catctgataa
    33841 atcagttgat agcgaaacaa tgtaactata ctaagttatg agcattacgc tcatagcttt
    33901 cttagaaagt aggtgtagtt ttggatgata ttcagaaaat aaaaaaagag ctttctgaat
    33961 tagttgaacg tgttgatgat gttgaaatac tagcaaatga aacagctgat catgtgcttg
    34021 aacttagaga ggaacataag caacatcata atgaactaag agaatctcat aaagaactta
    34081 aagataagca agataaagtt gtagatgaga atttagagca aacaaagata ttaaacagaa
    34141 ttgaagaaag atatcaaacg caagtagatg ttgcgcaaaa aaatgaagaa aagacactcg
    34201 cccaaaataa atggctcgta ggtgccatat gggcgcttgt aacaattgtt atgattgcag
    34261 tcattactgc atcaattact gcgttattac cttaagggag gtggacataa tgagttgggc
    34321 aagatggtta tcatgttatt tgtatggtcg taaatgtaaa taatgttttt ggtcagtgca
    34381 tcggcactgg ctttttattt tgattgaaaa gaggtacgta catggtatta cacagctcaa
    34441 aagacaggaa gcatactgca agtgaagttg ggaagtgttg tcaataccaa gtaagtaaga
    34501 tatctgaaat gtataataga gtaaaaatga aatcttttta ttatattata gacaagtata
    34561 aaaaaggtat agtaatatat gtataagtaa ataatgatca ttccataatt attgtatata
    34621 actaataatt acttcaacaa aaataatcta ttatacaaat atttcggata ataacaagtt
    34681 tatatggaat tatgctttag aggtgagtaa aataaaaaaa acaacattta tactactttc
    34741 atttattgcc ctaacgttga taacaagtcc atttgtaaat tgtagcgaga aaagcgaaga
    34801 aataaatgga aaagatttgc aaaaaaagtc tgaattgcag ggaactgctt taagcaatct
    34861 tagacaaacc tattatcata atggaagtgc tataattgaa aataaagaga gtaatgatca
    34921 atttttaaag aacactatat tgtttaatga tttttttaca ggtcatcaat ggtataatga
    34981 tttattagta gaccttggtt caaaagacac cgccaatata tacaaaggga aaaaagtgga
    35041 tttatatggt gtttattatg gttatcaatg tactgggggt acaccattca aaacagcttg
    35101 tatgtatggc ggtgtaacgt tacatgataa taatcaattg gaggaagaaa agaaagtacc
    35161 gattaactta tggatagatg gtaaacaaaa tacagtacct ttgggaacgg ttaaaactaa
    35221 taaaaaagaa gtaactgttc aggagctaga ccttcagtca agacattatt tacatgaaac
    35281 atataattta tataacacag atgcatttaa tggaaaaata caaagaggat taattgagtt
    35341 tcacccttct tctggtgatt cggttggtta tgatttattt ggtgctcaag gacaatatcc
    35401 agatacacag ttgaggatat atagagataa taaaacgatt aagtctaaaa atatgcatat
    35461 tgatatatat ttatatacaa cttgagtgaa attttggctg aaaaaattta aaatctataa
    35521 aaagtaccat aagttatttt attactatac ttaaaacatt cactttttta ctgctgtttg
    35581 taagttttat aaaaaatttc tatagatagt tttgaacaaa gcgagaataa tctgaaagta
    35641 tacaagcagt aaaaaaagta tatgtgctat aatatgcttt gagcaagttg gatagatggt
    35701 ggctatctga gtataaggag gtggtgccta tggtggcatt actgaaatct ttagaaagga
    35761 gacgcctaat gattacaatt agtaccatgt tgcagtttgg tttattcctt attgcattga
    35821 taggtctagt aatcaagctt attgaattaa gcaataaaaa ataaccatcg ctaactttgg
    35881 ctggtttcga tggttaaatg gttattaatt taatctttaa tctaaaatag ccaccgtctt
    35941 tttaacgggc tcactagggt aacatgtttg cgcatgttgc cctttttcta tatataaatt
    36001 aacacaccat aatataaata tcaaatagac ggcttattgg tcgtcttttt attttggata
    36061 aaaggagata agaatatgat taattggaaa attagaatga aacaaaaatc attttgggta
    36121 gcgatattgt cagctatctt tttatttgct caaaacatcg ccaaagctat tgggtatgat
    36181 attcaagttt atacagagca attaacagac ggtttaaacg ctatattagg atttttagta
    36241 ttaactggtg tgattcaaga cccgactact aaaggtatag gtgatagcca ccaagcttta
    36301 gaatatgaag aaccaagaag aaaatactag gaggtaaaat aatgaaaaca tacagtgaag
    36361 caagagcaag gttacgttgg tatcaaggta gatatattga ttttgacggt tggtatggtt
    36421 accaatgtgc agatttagca gttgattaca tttattggtt gttagaaatt agaatgtggg
    36481 gaaatgcaaa agatgcaatc aataacgatt ttaaaaacat ggcaacagta tatgaaaaca
    36541 caccatcgtt tgttccacaa ataggtgatg tggctgtatt taccaaagga atatataaac
    36601 aatacggtca tattggttta gtgtttaatg gtggtaatac aaatcaattt ttaattttgg
    36661 aacagaacta tgacggtaac gcaaatacgc ctgcaaagtt acgttgggat aattattacg
    36721 gctgtactca ctttattaga cctaagtata aaagtgaggg cttaatgaat aagatcacaa
    36781 ataaagttaa accacctgct caaaaagcag tcggtaaatc tgcaagtaaa ataacagttg
    36841 gaagtaaagc gccttataac cttaaatggt caaaaggtgc ttattttaat gcgaaaatcg
    36901 acggcttagg tgctacttca gccactagat acggtgataa tcgtactaac tatagattcg
    36961 atgttggaca ggctgtatac gcgcctggaa cattaatata tgtgtttgaa attatagatg
    37021 gttggtgtcg catttattgg aacaatcata atgagtggat atggcatgag agattgattg
    37081 tgaaagaagt gttttaattc ttaggttaaa atgttaaata tt
//
LOCUS       DALPQQ010000013        36086 bp    DNA     linear   BCT 22-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus strain K18-6-464
            SAMD00233528-rid16434743.denovo.013, whole genome shotgun sequence.
ACCESSION   DALPQQ010000013 DALPQQ010000000
VERSION     DALPQQ010000013.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMD00233528
            Sequence Read Archive: DRR236061
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 36086)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 36086)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001543423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001543423.1
            Genome Coverage       :: 77x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/22/2022 17:09:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,811
            CDSs (total)                      :: 2,743
            Genes (coding)                    :: 2,689
            CDSs (with protein)               :: 2,689
            Genes (RNA)                       :: 68
            rRNAs                             :: 2, 4, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 4, 2 (16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 54
            CDSs (without protein)            :: 54
            Pseudo Genes (ambiguous residues) :: 0 of 54
            Pseudo Genes (frameshifted)       :: 27 of 54
            Pseudo Genes (incomplete)         :: 27 of 54
            Pseudo Genes (internal stop)      :: 10 of 54
            Pseudo Genes (multiple problems)  :: 10 of 54
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..36086
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMD00233528-rid16434743.denovo.013"
                     /strain="K18-6-464"
                     /db_xref="taxon:1280"
                     /geo_loc_name="Japan: Niigata"
     gene            69..515
                     /locus_tag="O7798_000550"
     CDS             69..515
                     /locus_tag="O7798_000550"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501131.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MarR family transcriptional regulator"
                     /protein_id="HDC2862826.1"
                     /translation="MYVENSYLSKQLCFLFYVSSKEIIKKYTNYLKEYDLTYTGYIVL
                     MAIENDEKLNIKKLGERVFLDSGTLTPLLKKLEKKDYVVRTREEKDERNLQISLTEQG
                     KAIKSPLAEISVKVFNEFNISEREASDIINNLRNFVSKNFDYSDKK"
     gene            731..1159
                     /locus_tag="O7798_000551"
     CDS             731..1159
                     /locus_tag="O7798_000551"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501132.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Hsp20/alpha crystallin family protein"
                     /protein_id="HDC2862827.1"
                     /translation="MILNFNQFENQNFFNGNPSDTFKDLGKQVFNYFSTPSFVTNIYE
                     TDELYYLEAELAGVNKEDISIDFNNNTLTIQATRSAKYKSEQLILDERNFESLMRQFD
                     FEAVDKQHITASFENGLLTITLPKIKPSNETTSSTSIPIS"
     gene            complement(1266..2435)
                     /locus_tag="O7798_000552"
     CDS             complement(1266..2435)
                     /locus_tag="O7798_000552"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501133.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NarK/NasA family nitrate transporter"
                     /protein_id="HDC2862828.1"
                     /translation="MYKTKGGFQLTLQTLSLVVGFMAWSIIAPLMPFIKQDVNVTEGQ
                     ISIILAIPVILGSVLRVPFGYLTNIVGAKWVFFTSFIVLLFPIFFLSQAQTPGMLMAS
                     GFFLGVGGAIFSVGVTSVPKYFPKEKVGLANGIYGMGNIGTAVSSFLAPPIAGIIGWQ
                     TTVRSYLIIIALFALIMFIFGDTQERKIKVPLMAQMKTLSKNYKLYYLSYWYFITFGA
                     FVAFGIFLPNYLVNHFGIDKVDAGIRSGVFIALATFLRPIGGILGDKFNAVKVLMIDF
                     VVMIIGAIILGISDHIALFTVGCLTISICAGIGNGLIFKLVPSYFLNEAGSANGIVSM
                     MGGLGGFFPPLVITYVANLTGSSHLAFIFLAVFGCIALFTMRHLYQKEYGSLKNG"
     gene            2805..3443
                     /locus_tag="O7798_000553"
     CDS             2805..3443
                     /locus_tag="O7798_000553"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015581906.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2268 domain-containing protein"
                     /protein_id="HDC2862829.1"
                     /translation="MYKINIIRSDSVYNNILKAPINDRDSIFTKEILVPFKKKFEVQH
                     MPIYNDDKQTMSAIQFLDAFQISPKDLRMSDQMSIQYLNNDFWSNCEKYLKVAIDQFS
                     NYSISSQVSNYHFTVLLGDRQKPLMYLNKNRGGDGGIPGYIMIYLVPSTSTINSMKSL
                     IAHEVNHNMRYQYIDWDGGSLIELIIAEGLAENYVESLYGKAHIGPWVTNTN"
     gene            3462..3719
                     /locus_tag="O7798_000554"
     CDS             3462..3719
                     /locus_tag="O7798_000554"
                     /inference="COORDINATES: protein motif:HMM:NF021537.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDC2862830.1"
                     /translation="MKNTIYNHLHLKHIFESMPYLYGDDINKLQGRPIVGLSHAAGYA
                     CGYHLVKYFLQKTNIPIEVATTLPAQKIINEVTEFWHTHTL"
     gene            3698..4438
                     /locus_tag="O7798_000555"
     CDS             3698..4438
                     /locus_tag="O7798_000555"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501136.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MerR family transcriptional regulator"
                     /protein_id="HDC2862831.1"
                     /translation="MAYTYTLKDIIEITGVTKRTLHYYDEIGLLVPDKNDKNYRVYKQ
                     QDLEKLQKILILKSFDFDIAKIKQYISYDNEQLRKLLSEQISKLDKKISDLQLIRRSV
                     CEFIKGLSLIDTSILNKTLQSQYDKEASIKYGHTKAYQSFIRRKDSLQSQDIRHKLTT
                     IFNKFNHMSLSHYPIQDCSDLVFEWKAFMNTIADFDDETLCCIAKTYEDDTRFKDYFN
                     SYDNQNLASYISEAVNYFLSNVNKSDNF"
     gene            complement(4696..5349)
                     /gene="nreC"
                     /locus_tag="O7798_000556"
     CDS             complement(4696..5349)
                     /gene="nreC"
                     /locus_tag="O7798_000556"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002464689.1"
                     /note="Involved in the regulation of the the nitrate
                     reductase operon narGHJI; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitrate respiration regulation response
                     regulator NreC"
                     /protein_id="HDC2862832.1"
                     /translation="MKIVIADDHAVVRTGFSMILNYQNDMEVVATAADGVEAYQKVME
                     YKPDVLLMDLSMPPGESGLIATSKIADSFPETKILILTMFDDEEYLFHVLRNGAKGYI
                     LKNAPDEQLLLAIRTVYKGETYVDMKLTTSLVNEFVSNSNQDTANTTDPFKILSKREL
                     EILPLIAKGYGNKEIAEKLFVSVKTVEAHKTHIMTKLGLKSKPELVEYALKKKLLEF"
     gene            complement(5372..6406)
                     /gene="nreB"
                     /locus_tag="O7798_000557"
     CDS             complement(5372..6406)
                     /gene="nreB"
                     /locus_tag="O7798_000557"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501138.1"
                     /note="Involved in the regulation of the the nitrate
                     reductase operon narGHJI; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitrate respiration regulation sensor histidine
                     kinase NreB"
                     /protein_id="HDC2862833.1"
                     /translation="MINEDSIQLDTLLKKYYEHSIEKIVFADDNGKIIAMNDAAKDIL
                     SEEDNYSAVANAICHRCEGYTNAYDVQSCKDCFLESMQVQATNFQVFMKTKDQKVMPF
                     TATYQLIDQDRGIHAFTLQNVSSQIEQQEKLHQQRMMRKTISAQENERKRISRELHDS
                     VIQEMLNVDVQLRLLKYQEDTTKLLEDAENIEYIVAKLIDDIRNMSVELRPASLDDLG
                     LEAAFKSYFKQFEENYGIKIIYTSNIKNTRFDSDIETVVYRVVQEAILNALKYADVNE
                     INVGIRQTGRHLVAEVIDAGNGFDPSSKPKGSGLGLYGMNERAELVSGSVNIETKIGE
                     GTNVTLNIPI"
     gene            complement(6430..6882)
                     /gene="nreA"
                     /locus_tag="O7798_000558"
     CDS             complement(6430..6882)
                     /gene="nreA"
                     /locus_tag="O7798_000558"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501139.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitrate respiration regulation accessory nitrate
                     sensor NreA"
                     /protein_id="HDC2862834.1"
                     /translation="MTPEAIIEDRRFQETLDKIRKEEGYDFAAIAFYESNKPSSPIKW
                     HYVSGNKNNRFKLIILRKGRGLAGTVMKTGKRMVIANVGLALGPEEKIDYPILLSESL
                     TAVLAVPLWYKNQVYGVLLFGQRDGRPLPKIFDNDDIQRKFGIFNDDK"
     gene            complement(6902..7579)
                     /gene="narI"
                     /locus_tag="O7798_000559"
     CDS             complement(6902..7579)
                     /gene="narI"
                     /locus_tag="O7798_000559"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501140.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="respiratory nitrate reductase subunit gamma"
                     /protein_id="HDC2862835.1"
                     /translation="MLNQFLWVIFPYLCLVVFVAGHIARYRYDKFSWTAKSSELIERK
                     RLMWGSLLFHLGIIPVFFGHVVGLLIPKPWMDAVGVSEHLYHIGAVYIGSIFGIITLI
                     GMFLLTARRVTTKSIRRLSSASDIFVNFLLLLIVFMGCYATLVTNIQHPDFNYRTSLS
                     IWFRQLFMLKPDASLMSGVPIAFKMHILLGFTIMACWPFTRLVHVWSVPLTYINRRYI
                     IYRKNKV"
     gene            complement(7572..8147)
                     /gene="narJ"
                     /locus_tag="O7798_000560"
     CDS             complement(7572..8147)
                     /gene="narJ"
                     /locus_tag="O7798_000560"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000606770.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitrate reductase molybdenum cofactor assembly
                     chaperone"
                     /protein_id="HDC2862836.1"
                     /translation="MINFDNFKKYQESFGYMAQQLCFPEKLTFHPKTFEETISKDHPA
                     YEDLVAFRNVMMTFSLSEIKAIYTDTFDFTKKAPLYMTYNKFDTQKERGQMLAKLKVL
                     YEMFGLEMVDNELSDYLPLMLQFLQVAEWRNDPRAEENIQLIIMIIEDGTYVMANALG
                     EDNNPYAYVIQALRKTLKLCLTSPKGVKHHA"
     gene            complement(8140..9699)
                     /gene="narH"
                     /locus_tag="O7798_000561"
     CDS             complement(8140..9699)
                     /gene="narH"
                     /locus_tag="O7798_000561"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009384084.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitrate reductase subunit beta"
                     /protein_id="HDC2862837.1"
                     /translation="MKIKAQVAMVLNLDKCIGCHTCSVTCKNTWTNRPGAEYMWFNNV
                     ETKPGVGYPKRWEDQEHYKGGWVLNRKGKLELKSGSRISKIALGKIFYNPDMPLIKDY
                     YEPWNYNYEHLTTAKSGKHSPVARAYSEITGDNIEIEWGPNWEDDLAGGHVTGPKDPN
                     IQKIEEDIKFQFDETFMMYLPRLCEHCLNPSCVASCPSGAMYKRDEDGIVLVDQDACR
                     GWRYCMTGCPYKKVYFNWKTNKAEKCTFCFPRIEAGMPTVCSETCTGRMRYLGVLLYD
                     ADRVHEAASAVDEKDLYEKQLDIFLNPFDEEVIAQAEKDGIGYDWIEAAQNSPIYKLA
                     IEYKLAFPLHPEFRTMPMVWYCPPLSPIMSYFEGKNTTQNPDAIFPAIEEMRLPIEYL
                     ANIFTAGDTEPVKGALQRMAMMRSYMRSQVTQQPFDTSRLERLGITERQTKDMYRLLG
                     LAKYEDRFVIPTSHKETYLDTYHAQGSTGYNYGGEHFGDNCEGCGVAVGSGKTGQEIY
                     NENFYGGIFRD"
     gene            complement(9689..13378)
                     /locus_tag="O7798_000562"
     CDS             complement(9689..13378)
                     /locus_tag="O7798_000562"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501143.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitrate reductase subunit alpha"
                     /protein_id="HDC2862838.1"
                     /translation="MGKFGLNFFKPTEKFNGNWSILESKSREWEKMYRERWSHDKEVR
                     TTHGVNCTGSCSWKVFVKNGVITWENQQTDYPSCGPDMPEYEPRGCPRGASFSWYEYS
                     PLRIKYPYIRGKLWDLWTEALEENNGNRVAAWASIVENEDKAKQYKQARGMGGHVRSN
                     WKDVTEIIAAQLLYTIKKYGPDRIAGFTPIPAMSMISYAAGARFINLLGGEMLSFYDW
                     YADLPPASPQIWGEQTDVPESSDWYNASYIIMWGSNVPLTRTPDAHFMTEVRYKGTKV
                     ISVAPDYAENVKFADNWLAPNPGSDAAIAQAMTHVILQEHYVNQPNERFINYAKQYTD
                     MPFLIMLDEDENGYKAGRFLRASDLGQTTEQGEWKPVIHDAISDSLVVPNGTMGQRWE
                     EGKKWNLKLETEDGSKINPTLSMTEGGYELETIQFPYFDSDGDGIFNRPIPTRQVTLA
                     NGDKVRIATIFDLMASQYGVRRFDHKLESKGYDDAESKYTPAWQEAISGVKQSVVIQV
                     AKEFAQNAIDTEGRSMIIMGAGINHWFNSDTIYRSILNLVMLCGCQGVNGGGWAHYVG
                     QEKCRPIEGWSTVAFAKDWQGPPRLQNGTSWFYFATDQWKYEESNVDRLKSPLAKTEE
                     LKHQHPADYNVLAARLGWLPSYPQFNKNSLLFAEEAKDEGIDSNEAILQRAIDEVKSK
                     QTQFAIEDPDLKKNHPKSLFIWRSNLISSSAKGQEYFMKHLLGTKSGLLATPNEDEKP
                     EEITWREETTGKLDLVVSLDFRMTATPLYSDIVLPAATWYEKHDLSSTDMHPYVHPFN
                     PAIDPLWESRSDWDIYKTLAKAFSEMAKDYLPGTFKDVVTTPLSHDTKQEISTPYGVV
                     KDWSKGEIEAVPGRTMPNFAIVERDYTKIYDKYVTLGPVLEKGKVGAHGVSFGVSEQY
                     EELKSMLGTWSDTNDDSVRANRPRIDTARNVADAILSISSATNGKLSQKSYEDLEEQT
                     GMPLKDISSERAAEKISFLNITSQPREVIPTAVFPGSNKQGRRYSPFTTNIERLVPFR
                     TLTGRQSYYVDHEVFQQFGESLPVYKPTLPPMVFGNRDKKIKGGTDALVLRYLTPHGK
                     WNIHSMYQDNKHMLTLFRGGPTVWISNEDAEKHDIQDNDWLEVYNRNGVVTARAVISH
                     RMPKGTMFMYHAQDKHIQTPGSEITDTRGGSHNAPTRIHLKPTQLVGGYAQISYHFNY
                     YGPIGNQRDLYVAVRKMKEVNWLED"
     gene            complement(13687..14664)
                     /gene="cobA"
                     /locus_tag="O7798_000563"
     CDS             complement(13687..14664)
                     /gene="cobA"
                     /locus_tag="O7798_000563"
                     /EC_number="2.1.1.107"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501144.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="uroporphyrinogen-III C-methyltransferase"
                     /protein_id="HDC2862839.1"
                     /translation="MSVEEYGKVYLIGAGPGNPNYLTKKAERLIREADVILYDRLVNP
                     LILQYANLTTEIIDVGKKPYAKHIQQEKINDCIVEAARRYNKVVRLKGGDPAIFGRVQ
                     EEVDTLNEHHIAFEIVPGVTSASAAVATMQTGLTMRTVAKSVTFSTGHFKDLEENEVD
                     VNSLVNGGTLAIYMGVKRLGKIITQIQQYTDIDYPIAIVFQASCFNEFVVKGRLSNII
                     SKLQHYSIEAKPGICIIGEVVDYTENTPKSYDPMKQFYVVSGSKHDALMLCEHLYDEG
                     YGCLLNPNDTSNGTYHSSQYDYYDAFIKQQENVTYISTDRADANTVLCH"
     gene            complement(14655..14969)
                     /gene="nirD"
                     /locus_tag="O7798_000564"
     CDS             complement(14655..14969)
                     /gene="nirD"
                     /locus_tag="O7798_000564"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501145.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitrite reductase small subunit NirD"
                     /protein_id="HDC2862840.1"
                     /translation="METKEKIKVTTIDELTPLIGKKVIVKGKEVGLFLTESGKIHAIH
                     NICPHKQGPLSEGTVSGEYVFCPLHDQKIDLNTGIVQEPDEGCVDVYEVEVTDGNVYI
                     CL"
     gene            complement(14973..17378)
                     /locus_tag="O7798_000565"
     CDS             complement(14973..17378)
                     /locus_tag="O7798_000565"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501146.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)/FAD-dependent oxidoreductase"
                     /protein_id="HDC2862841.1"
                     /translation="MAKQKLVMIGNGMAGIRTIEEILERANDLYDITVIGKEPYPNYN
                     RIMLSNILQNKMTVEETIMNPYEWYEEHGIELITNDPVIEVDRANQSVTTANGIEVSY
                     DKLIFATGSKAFVIPVPGSTLPSVIGWRTIDDTEQMMNIAKTKKKAIVIGGGLLGLEC
                     ARGLLDQGMEVTVLHLAEWLMEMQLDRKAGNMLKADLEKQGMKFEMQANTTEILGEDD
                     VEGVKLADGREIPADLVVMAVGIRPYTEVAKESGLDVNRGIVVNDVMQTSDSNVYAVG
                     ECAEHNGKVYGLVAPLYEQGKVLADHLTNKETNGYKGSTTFTSLKVSGCDLYSAGQIV
                     ENAEIKGIEIFNSVDNNYKKIFLKDGNVVGAVLYGDIDDGSRFYNMMKKGESTEDYTL
                     VSLLTKGGEEASLSIADMADDETICGCNGVDKGTIVNAITENGFTTVEEVTAKTKAGN
                     SCGKCKPQIAQILQHTLGDDFVAAKPAGICGCTDLTRDQIVTQIRAKGLKTSKEVRHV
                     LNFKNKGGCPKCRPAINYYLNMVYPHDHEDERESRFANERYHANIQNDGTFSVIPQMR
                     GGVTDADQLIRLGEVAKKYHVPLVKVTGSQRVGLYGVKKEELPNIWEDLGMRSASAYG
                     KKTRSVKSCVGKEFCRFGTQYTTRLGIRLEKTFEYIDTPHKFKMGVSGCPRSCVESGV
                     KDFGIISVENGFQIYIGGNGGTEVEKAEFLTTVETEDEVIKLCGALMQYYRETGIYAE
                     RTAPWLRRLGFENVKEVLLDPERQNELFERIMDAKKAVEAEPWEAITSNAQARRIFEV
                     EKV"
     gene            complement(17444..18175)
                     /locus_tag="O7798_000566"
     CDS             complement(17444..18175)
                     /locus_tag="O7798_000566"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501147.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sirohydrochlorin chelatase"
                     /protein_id="HDC2862842.1"
                     /translation="MNGNIIVAHGMRHGRQNQALEAFISELVKDDIHHYDIAFLESEH
                     QDLETVMTTLIQSGVDHFKIVPLLIFSAMHYLKDIPNIVHEMKRRYPDIKVEVSEPLG
                     THPLMRRLIEQRICDALAGDEQQVGVMVVAHGNINGKFTKAHEELQICAQNLQISKPT
                     YARTLYGEISFTHDLESISKRYQKLIVVPLFLYDGRLVNKVKQQMNDMVINTDIHFTP
                     SINFDPILKQIINDRLESLMIPMKI"
     gene            complement(18405..18941)
                     /locus_tag="O7798_000567"
     CDS             complement(18405..18941)
                     /locus_tag="O7798_000567"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501148.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HDC2862843.1"
                     /translation="MTKTMIRLASEQDAEKLQQLMHEAFTPLRELGIDWPSVNANLDA
                     VKENIDKNTTFVMTIDDEIISTITVRYPWGSVKSISGYPFVWWFATNPEYEGKGYGSQ
                     LLTYVEEAFLRDTLKSAAVTLGTSARLHPWLLKIYEKRGYEIYSEHENDDGDLGVIMR
                     KVLIPERFDETILGQPPF"
     gene            complement(19174..19998)
                     /locus_tag="O7798_000568"
     CDS             complement(19174..19998)
                     /locus_tag="O7798_000568"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501149.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="formate/nitrite transporter family protein"
                     /protein_id="HDC2862844.1"
                     /translation="MIENKKTVEDTYSTGAIVDSISSSVQMKQVMVQQTPGRYMLKAM
                     MAGFLLSIVTVFMFGIKTQFASTHVDGLINLMGAIAFSLGLILVVLTNSELLTSNFMY
                     FTVGWYYKVVSVKKMTWILLYCFLGNILGGFVLFFLMKFAHVMTPEMTQALTALVQKK
                     TVDSTWLNIFTKGIFCNFFINIGIFISMQFKGGLTKAFFIACGVVVFVYMGYEHVVFN
                     AGLYAGMVFFNLDAVSWLHVLKNIVFAFLGNFVGGGIFVGLVYAFLNGKRNRLEQQ"
     gene            complement(20215..20397)
                     /locus_tag="O7798_000569"
     CDS             complement(20215..20397)
                     /locus_tag="O7798_000569"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501150.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDC2862845.1"
                     /translation="MVERYIKVLILYIFTTLLSSISVTSKCVPNKVIRFILRTAIGYS
                     VFAYGLHYFSNLKKNK"
     gene            complement(20481..20948)
                     /locus_tag="O7798_000570"
     CDS             complement(20481..20948)
                     /locus_tag="O7798_000570"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501151.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SRPBCC domain-containing protein"
                     /protein_id="HDC2862846.1"
                     /translation="MTIKVEDNKIIFSRTIEAPIEKVFDAYTTKALFEKWFHPKDAST
                     KVFRFNAVSGGDAFYAIKTPTMTSYTLAEYKTVKRPYLIEYIDSFATPQGAKDTKMPS
                     MKITLSFSKSNTTKTTVTSTSVFPTKEAAQQVINMGVEQGMNQTLDQLDALLK"
     gene            complement(21134..22684)
                     /gene="adcA"
                     /locus_tag="O7798_000571"
     CDS             complement(21134..22684)
                     /gene="adcA"
                     /locus_tag="O7798_000571"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501152.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc ABC transporter substrate-binding
                     lipoprotein AdcA"
                     /protein_id="HDC2862847.1"
                     /translation="MKKKLGMLLLVPAVTLSLAACGNDDGKDKDGKVTIKTTVYPLQS
                     FAEQIGGKHVKVSSIYPAGTDLHSYEPTQKDILSASKSDLFMYTGDNLDPVAKKVAST
                     IKDKDKKLSLEDKLDKAKLLTDQHEHGEEHEHEGHDHEKEEHHHHHGGYDPHVWLDPK
                     INQTFAKEIKDELVKKDPKHKDDYEKNYKKLNDDLKKIDNDMKQVTKDKQGNAVFISH
                     ESIGYLADCYGFVQKGIQNMNAEDPSQKELTKIVKEIRDSNAKYILYEDNVANKVTET
                     IRKETDAKPLKFYNMESLNKEQQKKDNITYQSLMKSNIENIGKALDSGVKVKDDKAES
                     KHDKAISDGYFKDEQVKDRELSDYAGEWQSVYPYLKDGTLDEVMEHKAENDPKKSAKD
                     LKAYYDKGYKTDITNIDIKGNEITFTKDGKKHTGKYEYNGKKTLKYPKGNRGVRFMFK
                     LVDGNDKDLPKFIQFSDHNIAPKKAEHFHIFMGNDNDALLKEMDNWPTYYPSKLNKDQ
                     IKEEMLAH"
     gene            complement(22873..22944)
                     /locus_tag="O7798_000572"
                     /pseudo
     CDS             complement(22873..22944)
                     /locus_tag="O7798_000572"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501155.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            complement(22979..23244)
                     /locus_tag="O7798_000573"
                     /pseudo
     CDS             complement(22979..23244)
                     /locus_tag="O7798_000573"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501153.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="Txe/YoeB family addiction module toxin"
     gene            complement(23244..23495)
                     /locus_tag="O7798_000574"
     CDS             complement(23244..23495)
                     /locus_tag="O7798_000574"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501154.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system Phd/YefM family
                     antitoxin"
                     /protein_id="HDC2862848.1"
                     /translation="MIIKNYSYARQNLKALMTKVNDDSDMVTVTSTDDKNVVIMSESD
                     YNSMMETLYLQQNPNNAEHLAQSIADLERGKTITKDIDV"
     gene            complement(23660..23761)
                     /locus_tag="O7798_000575"
     CDS             complement(23660..23761)
                     /locus_tag="O7798_000575"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501155.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDC2862849.1"
                     /translation="MLRSVSDTNLLGQYEKAISISDMIEIVFLMYEV"
     gene            complement(23768..24367)
                     /locus_tag="O7798_000576"
     CDS             complement(23768..24367)
                     /locus_tag="O7798_000576"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501156.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DsbA family protein"
                     /protein_id="HDC2862850.1"
                     /translation="MTKKLLTLFIVSMLILTACGKKESATTSSKNGKPLVVVYGDYKC
                     PYCKELDEKVMPKLRKNYIDNHKVEYQFVNLAFLGKDSIVGSRASHAVLMYAPKSFLD
                     FQKQLFAAQQDENKEWLTKELLDKHIKQLHLDKETENKIIKDYKTKDSKSWKAAEKDK
                     KIAKDNHIKTTPTAFINGEKVEDPYDYESYEKLLKDKIK"
     gene            complement(24386..24748)
                     /locus_tag="O7798_000577"
     CDS             complement(24386..24748)
                     /locus_tag="O7798_000577"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000819849.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4467 domain-containing protein"
                     /protein_id="HDC2862851.1"
                     /translation="MKRFVATVLLLLVFISGCGNDKYVKEIDEAVKIQNQKQEQLAKK
                     GNGDRVDHFERKDANIYVYDKDKIIILAYKPLSNDDEVHYYAYDFSDKRVSYKQDFDS
                     RRYYQQHDADYHEENMTN"
     gene            25004..26254
                     /gene="fmhA"
                     /locus_tag="O7798_000578"
     CDS             25004..26254
                     /gene="fmhA"
                     /locus_tag="O7798_000578"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501158.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FemA/FemB family glycyltransferase FmhA"
                     /protein_id="HDC2862852.1"
                     /translation="MNFVTLTSDEFNAFTTKHFSHYTQSAIHYNHRVDLKGDVHLVGV
                     KDDNGQVIAGCLLTEARTLKFFKYFYTHRGPVMDYTNQSLVAFFFKALTSYLKKHNCL
                     YVLVDPYLIENLRNADGEIVKSYDNRAFVRTMDKLGYKHQGFPVGYDSMSQIRWLSVL
                     DLKDKTEDQLLKEMDYQTRRNIKKTYDIGVKTKTLTIDETQTFFDLFHMAEEKHGFKF
                     RELPYFEEMQKLYDDHAMLKLAYIDLNEYLKTLQLKQQQLTAELSGVEEALEESPNSK
                     KNKTKRTQLEQQLNSNKRKIDNTIEQIEQDGAVLNLASALFIYNEHEVYYLSSGSNPK
                     YNAYMGSYHLQWEMIKFAKAHHIDRYNFYGITGDFSESSEDYGVQQFKKGFNAHVEEY
                     IGDFIKPIKPLLYKVQTYLNHKRR"
     gene            complement(26351..27082)
                     /locus_tag="O7798_000579"
     CDS             complement(26351..27082)
                     /locus_tag="O7798_000579"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501159.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter ATP-binding protein"
                     /protein_id="HDC2862853.1"
                     /translation="MIQLNNIHKSFNDVEVIKGIDLSVEQGEVVTLIGRSGSGKTTLL
                     RMINALEIPTEGTVYVNGKTYTSKDKKSQIEVRKQSGMVFQSYNLFPHKTALENVMEG
                     LITVKKLKKDEARGKSLELLEKVGLTHVKDQRPHALSGGQQQRVAIARALAMNPKVML
                     FDEPTSALDPELVNDVLKVIKDLANEGMTMVIVTHEMRFAKEVSNNIVFIHEGMIGEQ
                     GAPEEMFNRPKTEELRRFLNVINEE"
     gene            complement(27079..27798)
                     /locus_tag="O7798_000580"
     CDS             complement(27079..27798)
                     /locus_tag="O7798_000580"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501160.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter permease"
                     /protein_id="HDC2862854.1"
                     /translation="MFLNLNSEQQHALDAAKQAFGPMLEGLVKYSIPITLVTFVLGLI
                     IALFTALMRISTSKILRSISRVYVSIIRGTPMIVQLFIIFYGIPELGRLLTNDADNQW
                     TLAPVVAAIIGLSLNVGAYASEIIRGGIISIPKGQTEAAYSIGMTYGQTIQRIILPQA
                     IRVSIPALGNTFLSLIKDTSLLGFILVAEMFRKAQEVASTTYEYLTIYVLVALMYWVV
                     CFIISIIQGIYESYIERGYRS"
     gene            complement(27779..28558)
                     /locus_tag="O7798_000581"
     CDS             complement(27779..28558)
                     /locus_tag="O7798_000581"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501161.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transporter substrate-binding domain-containing
                     protein"
                     /protein_id="HDC2862855.1"
                     /translation="MKRLLFVMIAFVFILAACGNNSSKDKEASKDSKTINVGTEGTYA
                     PFSFHDKDGKLTGYDIDVIKAVAKEEGLKLKFNETSWDSMFAGLDAGRFDVIANQVGI
                     NPDREKKYKFSKPYTFSSAVLVIRENEKDIKDFDDVKGKKLAQTFTSNYGKLAKDKGA
                     DITKVDGFNQSMDLLLSKRVDGTFNDSLSYLDYKKQKPNAKIKAIKGNAEQSRSAFAF
                     SKKADDETVQKFNDGLKKIEENGELAKIGKKWFGQDVSKSK"
     gene            complement(28679..30118)
                     /gene="mdeA"
                     /locus_tag="O7798_000582"
     CDS             complement(28679..30118)
                     /gene="mdeA"
                     /locus_tag="O7798_000582"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000038968.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux MFS transporter MdeA"
                     /protein_id="HDC2862856.1"
                     /translation="MSKKQKLTMIITMLMGGFFGLLNETLLVTALPSIMKDFEISYTQ
                     VQWLTTAFLLTNGIVIPLSALVIQRYTTRQVFLVGISIFFLGTLLGGLSPHFATLLVA
                     RIIQALGAGIMMPLMMTTILDVFQPHERGKYMGIFGLVIGLAPAIGPTLSGYLVEYFN
                     WRSLFHVVAPIAAVTFLIGFKTIKNVGTTIKVPIDFISVIFSVLGFGGLLYGTSSISE
                     KGFDNPIVLVSMIGGVVLVALFVLRQYRLSTPLLNFAVFKNKQFTVGIIIMGVTMVSM
                     IGSETILPIFVQNLLHRSALDSGLTLLPGAIVMAFMSMTSGALYEKFGPRNLALVGMA
                     IVVITTAYFVVMDEQTSTIMLATVYAIRMVGIALGLIPVMTHTMNQLKPEMNAHGSSM
                     TNTVQQIAGSIGTAALITILSHASKNFSPTMSDYNGMNKIDMMNQIKVDTMLHGYHAG
                     FLFALLITVVSFFCSFMLQGKKKEVDSRQ"
     gene            30292..30396
                     /locus_tag="O7798_000583"
     CDS             30292..30396
                     /locus_tag="O7798_000583"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501164.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="putative metal homeostasis protein"
                     /protein_id="HDC2862857.1"
                     /translation="MKLDLQTARRNLNSPNIKTRKRALKIIKQHKRAK"
     gene            complement(30550..31236)
                     /locus_tag="O7798_000584"
     CDS             complement(30550..31236)
                     /locus_tag="O7798_000584"
                     /EC_number="5.4.2.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501165.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2,3-diphosphoglycerate-dependent
                     phosphoglycerate mutase"
                     /protein_id="HDC2862858.1"
                     /translation="MPKLILCRHGQSEWNAKNLFTGWEDVNLSEQGINEATRAGEKVR
                     ENNIAIDVAFTSLLTRALDTTHYILTESKQQWIPVYKSWRLNERHYGGLQGLNKDDAR
                     KEFGEEQVHIWRRSYDVKPPAETEEQREAYLADRRYNHLDKRMMPYSESLKDTLVRVI
                     PFWTDHISQYLLDGQTVLVSAHGNSIRALIKYLEDVSDEDIINYEIKTGAPLVYELTD
                     DLEVIDKYYL"
     gene            complement(31563..32429)
                     /locus_tag="O7798_000585"
     CDS             complement(31563..32429)
                     /locus_tag="O7798_000585"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501166.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cation transporter"
                     /protein_id="HDC2862859.1"
                     /translation="MSHNENLKLAQRGAYLSLIVYIILSIVKYVTGFVFNSAAVRADA
                     LNNMTDIIVSLAVIIGLKISIKPADRNHPYGHLKSENISSLLVSFVIMFVGIQVVIQN
                     APRLFKEDDVVPNAITIIVSLISGLVMLIVFAVNQRLAKRTKSSSLNSAAKDNLSDSL
                     VSIGTAIGLIFTQIGFPIVDIILATLLGLLIVYTGFGIFKEAIFMLSDGFNETELEAY
                     RNDILEVDEVQEVKSIKGRYHGSSVFIDVTIVVDANLSLVEAHQICDNVEHHLHKKGI
                     SSVYVHPEPDHL"
     gene            complement(32982..33086)
                     /locus_tag="O7798_000586"
     CDS             complement(32982..33086)
                     /locus_tag="O7798_000586"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501167.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDC2862860.1"
                     /translation="MLTNRLTSVNYVKKRLIQNIQRILSKEVLYGEMQ"
     gene            33181..34491
                     /gene="sbi"
                     /locus_tag="O7798_000587"
     CDS             33181..34491
                     /gene="sbi"
                     /locus_tag="O7798_000587"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501168.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="immunoglobulin-binding protein Sbi"
                     /protein_id="HDC2862861.1"
                     /translation="MKNKYISKLLVGAATITLATMISNGEAKASENTQQTSTKHQTTQ
                     NNYVTDQQKAFYQVLHLKGITEEQRNQYIKTLREHPERAQEVFSESLKDSKNPDRRVA
                     QQNAFYNVLKNDNLTEQEKNNYIAQIKENPDRSQQVWVESVQSSKAKERQNIENADKA
                     IKDFQDNKAPHDKSAAYEANSKLPKDLRDKNNRFVEKISIEKAIVRHDERVKSANDAI
                     SKLNEKDSIENRRLAQREVNKAPMDVKEHLQKQLDALVAQKDAEKKVAPKVEAPQIQS
                     PQIEKPKVESPKVEVPQIQSPKVEVPQSKLLGYYQSLKDSFNYGYKYLTDTYKSYKEK
                     YDTAKYYYNTYYKYKGAIDQTVLTVLGSGSKSYIQPLKVDDKNGYLAKSYAQVRNYVT
                     ESINTGKVLYTFYQNPTLVKTAIKAQETASSIKNTLSNLLSFWK"
     gene            35027..35956
                     /gene="hlgA"
                     /locus_tag="O7798_000588"
     CDS             35027..35956
                     /gene="hlgA"
                     /locus_tag="O7798_000588"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501170.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bi-component gamma-hemolysin HlgAB subunit A"
                     /protein_id="HDC2862862.1"
                     /translation="MIKNKILTATLAVGLIAPLANPFIEISKAENKIEDIGQGAEIIK
                     RTQDITSKRLAITQNIQFDFVKDKKYNKDALVVKMQGFISSRTTYSDLKKYPYIKRMI
                     WPFQYNISLKTKDSNVDLINYLPKNKIDSADVSQKLGYNIGGNFQSAPSIGGSGSFNY
                     SKTISYNQKNYVTEVESQNSKGVKWGVKANSFVTPNGQVSAYDQYLFAQDPTGPAARD
                     YFVPDNQLPPLIQSGFNPSFITTLSHERGKGDKSEFEITYGRNMDATYAYVTRHRLAV
                     DRKHDAFKNRNVTVKYEVNWKTHEVKIKSITPK"
BASE COUNT        11768 a         6883 c         5097 g        12338 t
ORIGIN      
        1 gcgatgaaat cagtacttga caactattac acttcataat attgtttatt ttaacaagga
       61 gtgattggat gtatgtagaa aacagctatc ttagcaaaca gttgtgtttt ttattttatg
      121 tttcttcaaa agaaataatt aaaaaataca caaactatct taaggaatat gatttaacct
      181 atactggtta cattgtttta atggcgattg aaaatgatga aaaacttaac atcaaaaaat
      241 taggtgaacg tgtgttctta gattctggaa cactgacacc attactaaag aaattagaaa
      301 agaaagatta cgttgttcga acacgtgaag agaaagatga aagaaaccta caaatttctc
      361 taacagaaca aggtaaagca ataaaaagcc ctcttgctga aatttctgtt aaggtcttta
      421 atgaattcaa catttcagaa cgagaagcat cagatataat taataatttg cggaattttg
      481 tttctaaaaa ttttgactat tccgacaaaa aataactccc tatcataagg tgatgggcag
      541 aagtatgcat cgatatgttt attcattatc tttattgctt gtataaatct cgatgctcag
      601 ttcttttgcc ctgattcctt atcaggcaca aatctaccca tttattactt ttttatctcc
      661 ccttttactt taactttttt aatactactc atataatggc tttgtaatac aaatttctat
      721 aatggaagtg atgatattga acttcaatca attcgagaat caaaactttt ttaacggtaa
      781 tccaagtgat acatttaaag atttaggtaa acaagtattt aattactttt caacaccttc
      841 atttgtaacg aatatatatg aaacagacga attatattac ttagaagctg aactagcagg
      901 tgtaaataaa gaagatatta gtatcgattt caataataat acgctcacta ttcaagctac
      961 tagaagcgca aaatacaaat ctgaacaact cattttagat gagcgtaact tcgaatcatt
     1021 aatgcgtcaa tttgattttg aagctgttga taagcaacat attactgcta gttttgaaaa
     1081 tgggttatta accattacct tgcctaaaat caaaccaagc aatgaaacta cttcatcaac
     1141 atctattcca atttcatagt taaatttaaa atgaatacac tactaaagcc ttaatgtcat
     1201 gctacgaata ttgcgcatga tattaaggct ttgtatttaa ctaaatgaat ggcatgtatt
     1261 acatatcaac cgtttttcaa tgagccatat tctttttggt ataaatgacg catggtaaat
     1321 aatgcaatac atccaaatac cgctaagaaa ataaatgcta aatgacttga tcctgttaaa
     1381 ttagctacgt acgtgattac tagtggtggg aagaatcctc ctaaaccacc catcattgat
     1441 acgataccat ttgcggatcc cgcttcattt aagaagtatg atggtactaa tttgaagatt
     1501 aagccgttac caatacctgc acaaatactt attgttaaac agcctacagt gaataatgcg
     1561 atatggtctg aaatacctaa aataatggca ccgataatca taacaacaaa atcaatcatc
     1621 aatactttaa ctgcattaaa tttatcacct aaaatgccac ctattggtct taagaatgtt
     1681 gccagcgcaa tgaatacacc tgatcgaata ccagcatcta ctttgtcaat tccaaaatga
     1741 tttactaagt agttaggtaa gaaaatacca aatgctacaa aagcaccaaa agtaataaaa
     1801 taccaataac ttaagtaata taatttgtag tttttagata atgttttcat ttgagccatt
     1861 aatggtactt taattttacg ttcttgtgtg tcaccaaaaa tgaacataat taatgcaaat
     1921 aaagcgataa taattaagta acttctaact gttgtttgcc aaccaataat acccgctatc
     1981 ggtggtgcta aaaatgaaga aactgctgta ccgatatttc ccataccata aataccattt
     2041 gctagaccta ctttttcttt agggaaatat ttaggaactg atgtaacacc aactgagaaa
     2101 attgcaccac ctacaccaag gaaaaatcct gaagccatta acatacccgg tgtttgtgct
     2161 tggcttaaga aaaatatcgg gaataacaat acgataaaac tagtaaagaa tacccattta
     2221 gcgccaacaa tgtttgttaa ataaccaaat ggcacacgga gcaccgatcc caaaataact
     2281 ggtatcgcta aaatgattga tatttgacct tcagtaacat tgacatcttg tttaataaag
     2341 ggcattaatg gcgcaattat actccaagcc ataaacccaa ccactaaact taatgtttgt
     2401 aatgtaagtt gaaagccacc ttttgttttg tacatacgtt tcaccttcat caaaatcatt
     2461 tattttttaa tagatatcaa tactctgcct atatattaga ggtcaatgtt atttaaaaat
     2521 gctttcattt atatgaaaac attcaatata gacaaagtat tgactacata tatattttat
     2581 tatgattgtg aaaaagtgaa cataaggatt ttcccttatt tatgaagtga tttaccctat
     2641 acaatgtccc tttaagatgc ttttagacac ttattcgcca tcattttaat catattattt
     2701 aggaacactc acatactttt cttaattttt ttcaattagt tacaattact gcttgaaaat
     2761 cacgttacgt tatcctttat gctgacaaca taaggaggtt tatcatgtat aaaatcaata
     2821 ttattagatc agattccgtc tataataata tactcaaggc accaataaac gaccgtgatt
     2881 caattttcac taaagaaata ttagtacctt ttaaaaagaa atttgaggta caacatatgc
     2941 ctatttataa tgatgacaaa cagacaatga gtgcgattca atttttagat gcctttcaaa
     3001 tttctcccaa agatttacgc atgtctgacc aaatgtcaat acaatacctg aataatgatt
     3061 tctggagtaa ttgcgaaaaa tatttaaaag ttgctataga tcaattttca aattatagta
     3121 tctcatctca agtttctaac tatcatttca cagtattact tggagatcgc caaaaaccac
     3181 ttatgtatct aaataaaaat cgcggtggtg atggtggcat accaggttat attatgattt
     3241 atttagtgcc gagtacaagt acaattaatt ctatgaaaag cttaattgca catgaagtaa
     3301 atcataatat gcgctatcaa tatattgatt gggatggcgg aagtttgatt gaattgatta
     3361 ttgcagaagg attagctgaa aactatgtag aatcattgta tggtaaagcg catattggac
     3421 cgtgggtaac aaatactaat tgaagtcgtg ataacgtaaa aattaaaaat actatttata
     3481 atcatttaca tttaaagcat atatttgaat cgatgcctta tctctatggt gatgatatta
     3541 ataaacttca aggtaggcct atcgttggct tatctcatgc tgccgggtat gcatgtggct
     3601 atcacttggt aaaatacttt ttacaaaaaa caaacatacc tattgaagtt gctacaacac
     3661 ttccagcaca aaaaataata aatgaggtga ctgaattttg gcatacacat acactttaaa
     3721 agatattatt gaaattacag gtgtaactaa aagaacttta cattattacg atgaaatagg
     3781 attattagtt ccagataaaa atgataaaaa ttatcgcgtt tataaacagc aagacttaga
     3841 aaaattacaa aagattttaa tactcaagtc ttttgatttt gatatcgcta aaataaaaca
     3901 atacatttcg tatgataatg aacaattgcg aaagttatta tcagagcaaa taagcaagtt
     3961 agataaaaag atttctgact tacaattaat tagacgctct gtatgtgaat ttattaaagg
     4021 actctctcta atagatacca gcattttaaa caagacacta cagtcacaat atgataaaga
     4081 agcatctata aaatatggtc atacgaaagc atatcaatca tttattagac gtaaagacag
     4141 cttacaatcg caggatatca gacataaatt gacaactatc ttcaataaat ttaatcatat
     4201 gtctttgagt cattatccaa tccaagattg tagtgatctc gtatttgagt ggaaggcatt
     4261 tatgaacact atcgctgatt ttgatgatga aacattatgc tgtattgcta aaacatatga
     4321 agatgatacg cgtttcaaag attactttaa ttcatatgat aatcaaaatt tagcatcata
     4381 catttcagaa gctgttaatt attttttgag caatgtgaat aagagcgaca atttttaatc
     4441 ctcatacaga tgctacaaca ctgaatacac caactaaaat aattgttcaa agtagaaaac
     4501 taatcattta ttctctaaat caataactat attaaaagtt atacctttgc aaagcgaatt
     4561 agtataggtt accgaaagga gaaaggatta ggttccattc gatttataaa aaaatatatt
     4621 tcgaaacata caaaagcgcc agaagataat catttcctct cgcgctttta tactgaatta
     4681 tattaatttc aaactctaaa actctaataa tttctttttc aatgcatatt caactagctc
     4741 aggtttactc tttaagccaa gctttgtcat aatatgcgtc ttatgtgctt ctactgtttt
     4801 cacagataca aataatttct ctgcaatttc tttattcccg taacctttgg caataagtgg
     4861 caatatttct agttctcgtt ttgataagat tttaaaagga tctgttgtgt ttgcagtgtc
     4921 ctgatttgaa ttagatacaa attcattcac taaagatgtt gtaagtttca tatctacata
     4981 tgtttcacct ttatatacag ttcgaatagc taacaataat tgttcatcag gtgcattttt
     5041 caatatgtaa cctttcgcac cattacgcaa cacatggaac aaatactcct catcatcaaa
     5101 cattgttaat attagtattt tagtttcagg aaaactgtca gcaattttac tcgtagcgat
     5161 aagacctgac tcacctggtg gcatacttaa atccattagt aacacatcag gtttatattc
     5221 cattactttt tggtaagctt cgacgccatc tgcagccgtt gcaacaactt ccatatcatt
     5281 ttgataattt aaaatcatag agaaccccgt acggacaaca gcgtgatcat cggcaatgac
     5341 tattttcaat tttattcccc caatgtatgt ttcaaattgg aatgttcaat gtaacattgg
     5401 taccctcacc aattttcgtt tcaatattga cgctaccgct gactaactca gctcgctcat
     5461 tcattccata taaaccgagt ccagaacctt taggcttaga acttggatca aaaccatttc
     5521 ccgcatctat cacttctgct accaaatggc gcccagtttg acggatacct acatttattt
     5581 catttacatc agcgtatttc aacgcattta aaatagcttc ttgcactact cgataaacaa
     5641 ccgtttcaat atcactatca aagcgagtat ttttaatatt tgatgtatat atgattttta
     5701 ttccataatt ttcttcaaac tgtttaaaat atgatttaaa agctgcttca aggcctagat
     5761 catccaaaga agcgggtctt aattcaaccg acatattacg tatatcatca attaatttag
     5821 cgacaatata ttcaatattt tctgcgtctt ccaaaagctt agttgtatct tcttgatatt
     5881 ttaataatct caattgaaca tctacattga gcatttcttg aatcacacta tcatgtaact
     5941 ctctagaaat tcgctttctt tcattttctt gggctgagat tgttttacgc atcatacgtt
     6001 gttgatgcaa tttctcttgc tgttcaattt gtgatgaaac attttgaagc gtaaatgcat
     6061 gaattcccct gtcttgatca atcaactgat atgttgctgt aaatggcatc actttttgat
     6121 ctttcgtctt cataaatact tggaaattcg tagcttgtac ttgcatcgat tctaagaaac
     6181 agtctttaca tgattgtaca tcataggcat ttgtataccc ttcacatctg tgacaaatcg
     6241 cattcgccac agcactgtaa ttatcttctt cagataatat atctttagca gcatcattca
     6301 ttgcaataat tttaccgtta tcatcagcaa aaactatctt ttcgattgaa tgctcataat
     6361 attttttcaa taaagtatct aactgtatac tgtcctcatt aatcatgact tacaccctaa
     6421 ttcatctcat tatttatcat cattgaaaat accaaactta cgttgaatat catcattatc
     6481 aaatattttt ggtaaaggac gaccatctct ttgaccaaat aatagtacgc catacacttg
     6541 attcttatac caaagcggca ctgctaaaac tgctgttaat gattcgctca ataaaattgg
     6601 atagtcaatc ttttcttcag gccctaaagc taaaccaaca ttggctatta ccatacgctt
     6661 tcctgttttc ataacagttc cagctaatcc acgacctttt cttaaaataa tcaatttaaa
     6721 tcgattattt ttattacctg aaacatagtg ccattttatt ggagatgatg gtttgttaga
     6781 ttcatagaaa gcgattgccg caaaatcata accctcttct ttgcgtattt tatctaatgt
     6841 ctcttgaaat ctacgatctt caattattgc ttctggtgtc aaatcctttc acctcttatg
     6901 cttacacttt attcttacgg taaataatat atctgcgatt tatatatgtc aaaggtacac
     6961 tccaaacatg caccaaacgt gtaaatggcc aacaagccat aatagtgaaa cctaacaata
     7021 tatgcatttt aaatgcaatc ggcacaccac tcatcaatga cgcatctggt tttaacataa
     7081 ataattgtct aaaccaaatt gataatgaag ttctgtagtt aaagtctgga tgttgtatat
     7141 ttgttactaa tgttgcgtaa catcccataa atacgataag taataataag aaatttacaa
     7201 atatatccga cgctgaactt aatcttcgaa tacttttcgt agtaacacgt ctcgctgtta
     7261 ataaaaacat ccctatcaaa gttattatac caaagatgct accaatataa acagcgccta
     7321 tatgatataa atgctcagac acacccactg catccatcca tggtttcggt attaacaatc
     7381 caactacgtg tccaaaaaac actggaataa tacctaagtg aaataataaa cttccccaca
     7441 tcaacctttt tctttctatt aattcactag atttagctgt ccaagaaaat ttatcataac
     7501 gataacgtgc aatatgacct gcgacaaaga caactaaaca taaatacgga aatataaccc
     7561 ataaaaactg attaagcatg atgtttcact ccttttggtg atgtcaaaca taatttcaat
     7621 gtttttctaa gtgcttgaat cacataggca tatggattgt tatcttcacc aagtgcattc
     7681 gccatcacat atgttccatc ctcaataatc ataatgatta attgaatatt ctcttcagct
     7741 cttggatcat ttcgccattc tgccacttgc aaaaattgaa gcatcaacgg tagataatca
     7801 gaaagttcat tatctaccat ttctagtcca aacatttcat ataatacctt taatttagct
     7861 aacatttgcc cacgttcttt ttgcgtatca aatttgttat acgtcatata taatggtgct
     7921 tttttcgtaa aatcaaatgt atctgtataa atcgctttga tttctgataa tgaaaatgtc
     7981 atcattacat ttctaaatgc tactaaatct tcatatgctg gatgatcttt cgaaattgtt
     8041 tcttcaaaag tttttggatg aaaagttaat ttttctggaa aacataactg ttgtgccata
     8101 tatccaaaac tttcttgata ttttttaaaa ttatcgaaat taatcacgga aaatccctcc
     8161 atagaaattc tcattataaa tttcttgacc agttttccct gaacctactg caacgccaca
     8221 gccttcacag ttatctccaa aatgctcgcc gccgtaattg tatcctgtac taccttgtgc
     8281 gtgatacgta tctaaatagg tttctttgtg tgatgttgga ataacaaatc gatcttcata
     8341 tttggctagt cctaataaac gatacatgtc tttagtttgg cgctcggtta tacctaatcg
     8401 ctctaatcga gacgtgtcaa atggctgttg agtaacttga gatctcatat aacttctcat
     8461 cattgccata cgttgtaggg ctccttttac tggctctgta tctcctgcag tgaaaatatt
     8521 agctaagtat tcaataggta aacgcatttc ttcaatggct gggaaaatcg catctggatt
     8581 ttgagttgta tttttacctt caaaatagct cataattggg ctaagtggtg ggcaatacca
     8641 aaccatcggc atcgttctaa attcaggatg taacggaaat gcaagtttat attcaattgc
     8701 taacttataa attggagagt tttgtgcagc ttcaatccaa tcgtaaccaa taccatcttt
     8761 ttcagcttga gcaatgactt cttcgtcaaa tgggtttaag aatatatcta attgtttttc
     8821 atataaatct ttctcgtcta ctgctgaagc tgcttcatga actcgatctg catcatataa
     8881 taaaacacct aagtaacgca tacgtcctgt acaagtttca gagcataccg taggcatacc
     8941 cgcctcgatt ctcgggaaac agaaagtaca cttttcagct ttgttcgttt tccaattgaa
     9001 gtaaactttc ttatatggac aacctgtcat acagtaacgc catccacgac atgcgtcttg
     9061 gtcaactaat acaatgccat cttcatcacg tttatacata gcacctgaag gacacgatgc
     9121 aacgcaactt ggattcaagc aatgttcaca taaacgtggt aaatacatca taaaagtttc
     9181 gtcaaattgg aatttaatat cttcttctat tttttggatg ttaggatctt ttggacctgt
     9241 aacatgacca cctgctaagt catcttccca gttaggtccc cattcaattt caatgttatc
     9301 ccccgtaatt tctgaatacg ctctagcaac tggcgaatgc ttccctgatt tcgcagttgt
     9361 taaatgttca taattatagt tccatggctc ataataatct ttaattaatg gcatatctgg
     9421 gttataaaaa attttaccta aagcaatttt tgaaattcta cttccagatt ttaattcaag
     9481 tttcccttta cgatttagta cccaaccacc tttgtagtgt tcttggtctt cccaacgttt
     9541 cggataccct acacctggct tcgtttctac gttgttgaac cacatgtact cagcacctgg
     9601 acgatttgtc caagtgtttt tacatgtcac actacacgta tggcatccta tgcatttatc
     9661 taaatttaat accatcgcaa cttgcgcttt aatcttcaag ccaattaacc tccttcatct
     9721 ttctaactgc tacatataaa tccctttggt tcccaattgg tccataataa ttaaagtgat
     9781 aactaatttg tgcgtatcct ccgactagtt gtgttggttt caaatggatt ctagtcggcg
     9841 cgttgtgtga accaccacgt gtatctgtaa tttctgaccc aggcgtttga atatgtttat
     9901 cttgtgcatg atacataaac attgtacctt taggcatacg atgcgaaata actgctcttg
     9961 ccgttacaac accattacgg ttatacactt ctagccaatc attatcttgg atatcgtgtt
    10021 tttcagcatc ttcatttgat atccaaaccg ttggaccacc tctaaatagt gtcaacatat
    10081 gcttattatc ttgatacatt gagtgtatat tccattttcc atgaggcgtt aaataacgca
    10141 gtaccaaagc atctgtacca cctttaattt tcttatctct attcccaaat accattggcg
    10201 gcaatgtcgg tttatatact ggtaagctct ccccaaattg ttggaaaact tcgtgatcca
    10261 cataataact ttgacgtcct gttaatgttc taaaaggtac tagacgttct atattcgttg
    10321 taaatggtga atatcgtcga ccttgtttat ttgaacctgg gaatactgct gtcggtatta
    10381 cttctcgtgg ttgtgaagtt atatttaaaa acgaaatttt ctcagcagcg cgttcgctag
    10441 aaatatcttt taacggcatt ccagtttgtt cttcgagatc ttcatatgat ttttgtgata
    10501 atttaccatt cgtagcagat gaaatactta gtattgcatc agctacatta cgtgctgtat
    10561 caatacgtgg acgattcgct ctcacagaat catcatttgt atcactccac gtacctaaca
    10621 tactttttaa ttcttcatat tgttcactga caccgaaact tacaccatgt gctccaactt
    10681 tccctttttc aagtacagga ccaagcgtga catatttgtc gtaaatttta gtgtagtcgc
    10741 gttctacaat tgcaaagtta ggcattgtac gtccaggtac cgcttcaatt tcacccttcg
    10801 accaatcttt cactacgccg tatggtgttg aaatttcttg ctttgtatca tgactaagtg
    10861 gagttgtcac aacatcttta aacgttccag gtaaatagtc ttttgccatt tctgaaaatg
    10921 cttttgccaa cgttttataa atatcccagt ctgaacgcga ttcccataac ggatcaatgg
    10981 caggattgaa aggatgtaca tatggatgca tatccgttga tgataaatca tgtttttcat
    11041 accaagtcgc tgccggcaaa acaatgtcag aatataacgg tgttgccgtc attctgaagt
    11101 ctaaagagac cactaaatct aacttacctg ttgtttcttc acgccacgta atttcttctg
    11161 gcttttcatc ttcatttggt gtagctaata accctgattt tgtgccaagt aaatgcttca
    11221 taaagtattc ttgacctttt gcagaacttg aaattaagtt tgaacgccat ataaataatg
    11281 attttggatg attctttttc aaatcaggat cttctattgc aaattgtgtt tgttttgatt
    11341 tcacttcatc aattgcacgt tgcaaaatcg cttcatttga atctatacct tcatctttag
    11401 cttcttctgc aaacaacaaa ctatttttat taaattgtgg atatgatggt aaccaaccaa
    11461 gtctagctgc taaaacatta taatcagctg gatgttgatg ctttaactcc tctgttttag
    11521 ctaatggaga ttttaaacga tctacatttg actcttcata tttccattgg tctgttgcaa
    11581 aatagaacca acttgttccg ttttgcaaac gtggtggtcc ttgccagtct ttcgcaaatg
    11641 cgacagtact ccatccttca atcggacgac atttttcttg tcccacatag tgagcccaac
    11701 cgccaccatt cacaccttga cagccacata acataactaa gtttaagatt gaacgataaa
    11761 tcgtatctga gttaaaccaa tggttaatac ccgcacccat gataatcatt gaacgccctt
    11821 cagtatcgat agcgttttgc gcaaattctt tcgctacttg aatgacaaca ctttgtttta
    11881 cgcctgaaat ggcttcttgc caagcaggtg tatattttga ttctgcatcg tcgtatcctt
    11941 ttgattctaa tttatgatca aaacgacgca cgccatattg acttgccatt aagtcaaaaa
    12001 ttgtagcaat acggactttg tcaccatttg ctaaagtgac ttgtcgagtt ggaattggac
    12061 gattgaatat cccatctcca tcactatcaa agtatgggaa ttgaattgtt tctaattcgt
    12121 atccaccttc tgtcattgat aatgtagggt taattttaga accatcttct gtttctagtt
    12181 ttaagttcca cttcttacct tcttcccaac gttgacccat tgtgccatta ggtactacta
    12241 aactatcgct gattgcatca tgaataactg gcttccattc gccttgctct gttgtttgac
    12301 ctaagtcact cgctcttaaa aatcgacccg ctttatatcc attttcatct tcatccagca
    12361 tgataagaaa cggcatatct gtatattgtt tagcgtaatt tataaagcgt tcattaggtt
    12421 gattaacata atgttcttgt aaaataacat gcgtcattgc ttgtgcaatt gcagcatctg
    12481 aaccaggatt cggtgctagc cagttatctg caaatttcac attttctgcg taatctggtg
    12541 ctactgaaat gacttttgta cctttatagc ggacttcagt cataaaatgt gcatccggag
    12601 tacgtgttaa aggtacatta gagccccaca taataatgta tgatgcgtta taccagtcac
    12661 ttgattcagg cacatctgtt tgctctcccc aaatttgtgg agaggcaggt ggtaaatctg
    12721 cataccagtc ataaaaacta agcatttcac caccaagcaa attgatgaat cgagcacctg
    12781 ctgcataact aatcattgac atcgctggaa taggtgtaaa tcctgcgatt cgatctggac
    12841 catatttttt tattgtatac agtaattgtg ctgcgattat ctctgtaacg tctttccaat
    12901 ttgaacgcac gtgccctccc atacctcggg cttgcttata ttgtttggct ttgtcttcat
    12961 tttcaacaat agacgcccat gcagcaacgc gattaccatt gttttcttct aatgcttcag
    13021 tccataaatc ccagagtttt ccacgaatat atggatattt gattcgaagc ggactgtatt
    13081 cataccaaga gaatgacgca cctcgtggac atcctctcgg ttcatattca ggcatatccg
    13141 gaccacaact tggatagtca gtttgttgat tttcccaggt aatcacacca tttttcacaa
    13201 atactttcca agaacatgag cctgtacagt taacaccatg tgttgttctt acttctttat
    13261 cgtggctcca acgttctctg tacatttttt cccattctct acttttactt tctaggatcg
    13321 accaattccc attaaatttt tctgttggct taaagaaatt caatccaaat tttcccatat
    13381 ttatatcctc ctacgtataa aaatacgatg tgtagatgtc gtgtttttaa atactttaaa
    13441 atgcccaaga ctattgcttt aattagattg tacatttttt cacaaacata aaatattagg
    13501 gaatcaccta attacttaag gaatttccct atcaataacg ggatttcatt gaaataatac
    13561 acaatcatgt atggtcatgc ttattgccaa tctaaatcgt tcaaatttgg cacaacgaca
    13621 aataaggctt caacacgaat atattctctc ggttgaaacc ttacttattc atttattttt
    13681 tataaattag tgacataaca ctgtattagc atctgcacga tcggttgaaa tatatgttac
    13741 attttcttgc tgcttaataa atgcatcata gtaatcatat tgcgacgaat gatatgtgcc
    13801 attcgatgta tcatttgggt ttagcaaaca gccataacct tcgtcatata aatgttcaca
    13861 gagcataagg gcgtcatgtt tagaaccact tactacataa aattgcttca taggatcata
    13921 tgatttagga gtgttttcag tataatcaac aacttcccct ataatacata tacctggttt
    13981 cgcctcaatt gaatagtgtt gcaattttga aataatatta cttaaacgcc ccttaacaac
    14041 aaactcgtta aaacacgatg cttgaaagac aatcgctatc gggtaatcaa tatctgtgta
    14101 ttgttgtatc tgtgtgataa ttttccctaa acgttttacc cccatataaa ttgctaacgt
    14161 gccaccattc actaaggaat tgacatccac ttcattttct tctaaatctt taaagtgacc
    14221 tgtagaaaat gtcacacttt tagcaactgt acgcattgtc aaacctgtct gcatagtagc
    14281 aactgctgcg ctcgctgatg tcacccctgg tacaatttca aacgcaatat gatgttcatt
    14341 tagtgtgtcg acttcttctt gcacacgacc aaatatcgct ggatcgccac ctttaagtct
    14401 aacaaccttg ttatatcgac gcgctgcttc cacgatacag tcatttattt tttcttgctg
    14461 aatatgtttt gcatacggct ttttaccaac atcgataatt tcagtagtca aattcgcata
    14521 ttgtaaaatt aacggattca ctaatcgatc atatagaatg acatccgctt cacgtattaa
    14581 acgctcagcc tttttcgtca aataattcgg attacctgga cccgcaccta tcaagtaaac
    14641 cttgccatat tcctctacag acatatatat acgttcccgt ctgtaacttc tacctcataa
    14701 acatctacac aaccttcatc aggttcttga acaatacctg tatttaaatc aattttttga
    14761 tcgtggagcg ggcaaaatac atattcccca ctcactgtcc cttcagacaa tggtccttgt
    14821 ttgtgtggac agatattgtg aatcgcatga attttgccac tttctgttaa aaacaaccct
    14881 acctctttgc ctttgacaat aacctttttt ccaattaggg gtgttaattc atctatagtt
    14941 gtcactttaa ttttttcttt tgtttccatg tattacacct tctccacttc aaaaattcta
    15001 cgtgcttgcg cattgctagt tattgcttcc caaggttcag cttcgactgc ttttttagca
    15061 tccataatgc gttcaaatag ttcattttgt ctttctgggt caagtaagac ttcttttaca
    15121 ttttcaaatc caagtcttct taaccatggc gctgttcttt cagcatatat acctgtttcg
    15181 cgataatatt gcatcaaagc accacataat ttgattactt catcttctgt ttctacagtt
    15241 gttaaaaatt cagctttttc aacttctgta ccaccattac caccgatata gatttggaat
    15301 ccattttcaa ctgagataat accaaaatct ttaacacctg attcaacaca acttcttggg
    15361 cagcctgata cacccatttt gaatttatga ggtgtatcga tgtattcaaa tgttttttct
    15421 aaacgaatgc caagtcgtgt cgtgtattgc gtaccaaatc gacaaaactc tttaccaaca
    15481 cagcttttaa ctgagcgtgt tttcttacca taagctgatg ctgaacgcat acctaggtct
    15541 tcccatatat ttggtaattc ttctttttta actccataca aaccaacacg ttgtgaacct
    15601 gtcactttaa ctagtggcac atgatatttc ttagccactt ctcctagacg aatcagttgg
    15661 tctgcatctg taacaccccc acgcatttga ggtataacag aaaatgtacc atcattttga
    15721 atattcgcat ggtaacgttc gttagcaaat cttgattctc tttcatcttc atgatcatgt
    15781 ggataaacca tgtttaaata atagttgatt gctggtcgac attttggaca tccaccttta
    15841 tttttaaagt ttaaaacatg tcgaacttct ttagatgttt ttaaaccttt cgctcttatt
    15901 tgcgttacta tttgatcgcg tgtcaaatca gtacaaccac atataccagc aggttttgcg
    15961 gcaacaaagt catctcctaa ggtgtgctgc aatatttgag caatttgcgg tttacattta
    16021 ccacatgaat tccccgcttt tgttttagcc gttacttctt caactgttgt aaagccattt
    16081 tccgtaatcg catttactat agtaccttta tcaacaccat tacaaccaca aattgtttca
    16141 tcatcagcca tatcagcaat tgatagcgat gcctcttctc cacctttagt aagcaatgat
    16201 acaagtgtgt aatcttcagt ggattcacct tttttcatca tgttataaaa gcgtgaacca
    16261 tcatcgatat caccatatag tactgcacca actacattac cgtcttttaa aaagattttt
    16321 ttatagttat tatcaacact attaaatatt tcaatacctt taatttctgc attttctaca
    16381 atttgaccag cactatacaa gtcacaccca gaaactttta atgacgtaaa tgttgttgat
    16441 cccttgtatc cgttcgtttc tttatttgtt aaatgatcag ctaatacttt accttgttca
    16501 tatagtggtg caacgagtcc ataaactttg ccgttatgtt ctgcacattc accaactgca
    16561 tatacattgc tatcacttgt ttgcatcaca tcattgacaa caataccacg attaacatct
    16621 agacctgatt ctttggctac ttctgtgtat ggtcgtatac ctactgccat aacaactaag
    16681 tctgccggaa tctcgcgtcc atcagccaat ttaacaccct caacatcatc ttctcctaag
    16741 atttcagttg tgttggcttg catttcaaac ttcatacctt gcttttctag atctgcttta
    16801 agcatatttc cagctttacg gtctagttgc atttccatca accattcagc taaatgtaac
    16861 accgttactt ccataccttg atctaataaa ccacgtgcac actctaaacc tagtaatcct
    16921 ccaccaatta caattgcttt ctttttagtc ttagcaatgt tcatcatttg ttcagtatca
    16981 tcaatcgttc tccaaccaat tacactcggt aatgtcgaac ctggaactgg aatgacgaat
    17041 gctttagaac ctgtcgcaaa aatcaattta tcgtatgata cttcaatacc atttgcagta
    17101 gtaactgatt gatttgctct atctacttca attacaggat catttgtaat taactcgata
    17161 ccatgttcct cataccactc atatggattc ataattgttt cttcaactgt cattttattt
    17221 tgtaaaatat ttgaaagcat gatgcggtta tagtttggat aaggttcttt acctattacc
    17281 gtaatatcat ataaatcgtt ggcgcgctct aatatttctt cgattgttcg aatgcccgcc
    17341 ataccgttac caatcattac tagtttttgc tttgccataa aatatgcccc tttactccat
    17401 aatatttatt tcaaaaaaag gtattaattt ttcgttagtg cttttatatt ttcattggaa
    17461 tcattaagct ttctaatcta tcgttaatga tttgctttaa aattgggtcg aagttaattg
    17521 aaggtgtgaa gtgtatatct gtattaataa ccatgtcatt catttgctgc ttcactttgt
    17581 taacaagtct tccgtcatat aaaaataatg gtacgacaat caatttttga taccgtttcg
    17641 agatgctttc taaatcatgt gtaaaactaa tctctccata tagcgttctc gcatatgtcg
    17701 gcttgctaat ttgcaaattt tgagcgcata tttgtaactc ttcgtgtgcc ttagtaaact
    17761 ttccattaat attgccgtgt gcaacaacca taactccaac ttgttgttcg tcacctgcta
    17821 atgcgtcaca aatacgttgt tcaattaatc gtctcattaa aggatgtgtg ccaagtggct
    17881 cgcttacttc tacctttatg tctggatacc gtcgtttcat ttcatgaacg atattcggta
    17941 tatccttgag ataatgcatt gcactaaaga ttagcaatgg tacaatttta aaatggtcaa
    18001 ccccactttg aatcaacgtc gtcattaccg tctctaaatc ctgatgctca ctttctaaaa
    18061 acgcaatatc atagtgatgt atatcatctt ttactaattc agaaataaat gcttctaacg
    18121 cttgattctg tcgtccgtgc ctcatgccat gtgcaacaat gatattccca ttcacattta
    18181 ccaacccttt cacacgtatt gtataccaaa tcattttgtt tttgtgaaaa gaatcacatt
    18241 ataatgtaaa atcagggaat tccctgatgc ctgtagtcat gcatattcct tatacatttt
    18301 ccctttttgt taaatcaaaa aaagcgaccg atatatgaat ccctactcaa catttatttg
    18361 agcaagcatt aatatatcgg tcgcttgtag tgtatattat tatcttaaaa tggtggttgg
    18421 cctaatattg tttcgtcaaa gcgctcgggt atcaatactt tgcgcatgat cacacctaaa
    18481 tcgccatcat cattttcatg ttcgctgtat atttcataac ctcttttttc ataaatttta
    18541 agtaaccacg gatgcaatct tgcagatgta cctaaagtaa ctgccgctga ctttaacgta
    18601 tctcgcaaaa atgcttcttc aacataagta agtaattggc taccatagcc tttcccttca
    18661 tactcaggat ttgtcgcaaa ccaccagaca aaaggataac ccgaaatact tttcacactt
    18721 ccccaaggat atctaaccgt aatcgtagat ataatttcat catcaattgt catgacaaat
    18781 gtagtatttt tatctatatt ttctttaaca gcatctaaat tagcattaac cgaaggccaa
    18841 tcaataccta gttctcttag aggcgtaaat gcttcatgca tgagttgttg caatttttct
    18901 gcatcttgtt cacttgcgag tcgaatcatc gtttttgtca tattaatccc cactcttttt
    18961 taaatgattt aaccatattt tatttttaaa ataaatatcc atcaaagtgt atcaataaat
    19021 ttatcacatg tcagaaagta tgcttcatct gaatacacca atactctcat gaaacttatt
    19081 aaaaattact ctctcaacgt aaaaaaacat tcaaattcat gaatggtttg gaagaatgat
    19141 tcattgttac gctatttaat cactacatct taattattgt tgctctaaac gattacgctt
    19201 accatttaag aaagcataaa cgagacctac aaaaataccg ccaccgacaa agttacctaa
    19261 gaaagcaaaa acgatatttt ttaaaacgtg taaccatgaa actgcatcaa ggttaaagaa
    19321 taccatacct gcatatagac ctgcattgaa cacaacgtgc tcatatccca tgtatacaaa
    19381 gaccacgaca ccacaagcta tgaagaatgc ctttgttaag ccgcctttga attgcataga
    19441 gatgaaaata ccaatattaa taaagaagtt acagaaaata ccttttgtaa aaatattcaa
    19501 ccatgttgaa tcaacagtct ttttctgaac taaagctgtt aaagcttgtg tcatttcagg
    19561 tgtcatgaca tgcgcaaatt tcattaagaa aaataacaca aacccaccta aaatatttcc
    19621 taagaaacaa tataataaaa tccaagtcat cttcttaaca gaaacgactt tataatacca
    19681 gcctactgta aagtacatga agttacttgt taataattca gagttagtta atacaactaa
    19741 aatcaaacct aaactaaacg caatggctcc cattaaattg ataagtccat ctacgtgagt
    19801 actcgcaaac tgcgtcttta ttccgaacat aaatacagta acgattgaga gtaaaaatcc
    19861 ggccatcatt gctttaagca tatatcggcc aggtgtttgc tgtaccatta cttgcttcat
    19921 ttgtactgaa gatgatattg aatcaacaat tgcgcctgtt gaatatgtat cttcaactgt
    19981 tttcttattt tctatcacag tacttccccc atttactttg atcaaataaa atttactttc
    20041 taattatatt agtaaatcaa tgtaattgat agattaaatt tcagaaaaat ctttttattc
    20101 tctcgaaaat gtagttttct ttcataaaaa cagcgagata aatcgcgtga ttggctaata
    20161 tctttatgat ttaagatatt acgacgctca ttttatctcg ctttatgtaa agtattactt
    20221 attctttttt aaatttgaaa agtaatgtaa accatatgca aatacactgt aaccaattgc
    20281 agtacgtaaa ataaacctta taactttatt aggtacacat tttgacgtta ctgaaataga
    20341 agatagtagt gttgtgaaaa tatataatat taaaactttg atataacgtt ctaccatcga
    20401 atcatccctc atttttataa tattacaaga ttattataaa ccgaatgaaa caaaaaagtt
    20461 tttacatatt ttcaacaact ttatttcaat aaagcatcaa gttgatctaa agtttgattc
    20521 ataccttgtt caacacccat gtttatgact tgttgagcgg cttcttttgt tggaaatacc
    20581 gatgttgatg tcactgtcgt tttcgttgta ttgctcttgg aaaatgacaa agtaattttc
    20641 atgcttggca tttttgtatc ttttgcacct tgaggtgtcg caaatgagtc aatatattca
    20701 attaaatatg gacgcttaac cgttttatat tctgctaatg tatagctggt cattgtaggt
    20761 gttttaatcg cataaaatgc atcaccgcct gaaacagcat taaagcgaaa cactttggta
    20821 ctagcgtctt ttggatgaaa ccatttttca aataatgctt ttgtcgtata ggcatcaaac
    20881 accttttcaa tcggtgcttc tatcgttctt gaaaaaataa ttttattatc ttcaacttta
    20941 atcgtcatct tcccactccc tatcttttat atttactcat cttaacatgc attgagtaac
    21001 atatgttacc aaatcatttg ttataaacta tagtaatatt aatcattccc tctgttgaaa
    21061 ttgataacta cgaaataaaa aacacactct attcagctat taacagttga gtagagtgtg
    21121 caaacctgtt gaattaatgc gctaacattt cttctttgat ttggtcttta tttaattttg
    21181 aaggataata tgttggccag ttatccattt cttttaataa cgcgtcatta tcattaccca
    21241 taaagatatg gaagtgttct gcctttttag gtgcaatgtt gtgatcgcta aattggatga
    21301 atttcggtaa gtctttatca ttaccatcga ccaatttaaa cataaatctc acgccacggt
    21361 tacctttagg atatttcaat gttttcttac cattgtattc atatttacca gtgtgtttct
    21421 taccatcttt agtaaatgta atttcatttc cttttatatc aatgttagta atatcagttt
    21481 tatatccttt gtcataataa gcttttaaat ctttagcaga tttcttcgga tcattttcag
    21541 ctttatgttc catcacttca tcaagcgtac cgtcttttaa gtaagggtaa acagattgcc
    21601 attcaccagc ataatcgctt aattcacggt ctttaacttg ctcatcttta aaatacccat
    21661 cagaaattgc tttgtcatgt ttactttcag ctttgtcgtc tttcacttta acaccactgt
    21721 ctaaagcttt accgatattt tcaatattag atttcattaa tgattgatac gtaatattat
    21781 cttttttctg ttgttcttta tttaaagact ccatgttgta gaattttaaa ggcttcgcat
    21841 ctgtttcttt acgaattgtt tcagtcactt tattcgcaac attatcttcg taaagaatat
    21901 atttagcatt gctatctcta atttctttaa caattttagt taattctttt tgtgatggat
    21961 cttcagcatt catgttttga ataccttttt gaacaaaacc ataacaatca gctaagtatc
    22021 caattgattc atgtgaaatg aatactgcat taccttgctt atcttttgta acttgcttca
    22081 tatcgttatc aattttctta agatcgtcgt ttaatttttt gtagtttttc tcatagtcat
    22141 ctttatgttt tggatctttt ttcactaatt catctttaat ttctttagcg aaagtttggt
    22201 taattttagg atctaaccat acgtgtggat catatccacc atgatgatga tgatgttctt
    22261 ctttctcatg atcatgtccc tcatgttcat gctcttcacc atgctcgtgt tgatcagtta
    22321 aaagctttgc tttatctaat ttatcctcta aagacagttt tttatcttta tctttgatag
    22381 tagatgcaac tttcttagca accggatcta aattatcccc tgtatacata aacaagtctg
    22441 acttgcttgc acttaatata tctttttgtg ttggttcata gctatgtaaa tctgtccctg
    22501 ctggatagat tgatgatacc ttcacgtgtt ttccaccaat ttgctctgca aatgattgca
    22561 atggataaac tgtcgtttta attgttacct tgccatcttt atcttttcca tcatcattcc
    22621 cacatgcggc taatgataaa gttacggctg gtacaagaag taacatacct aatttctttt
    22681 tcatagtcac cctcctaaat agtaatcttt acgttttaaa attatatact catgctactt
    22741 aaaatacaag cactgttttt ataaataata taaagtcgaa tcatacttta ggtatttacc
    22801 acttttcgtt ttatctaata catgactatt gtacaaatat gatacagaaa actttatagt
    22861 atttacgaac gtcataatat aagaaaaaaa gacaatctct atcatattgc taatagaaat
    22921 tgccttttca tattgtccta aaataactta ccctattttt atagtgtgac ttttagattt
    22981 aataatggta tttacatgat gctattttta tatgattgtc atctactgta taaaccaatc
    23041 tatgttcgtg attgatacgt ctactataat acccagtcag attcgatttt aacttttcag
    23101 gcttacctat accttccaat gcaccatttc tgtcaatact tttaagtaac tcattaatct
    23161 tcttcaccat tttttatcgt tctgctgaaa atacttataa tcttcaaagg cttgaggcga
    23221 aaacgtaata tttaacctag ccattataca tctatatctt tcgttatagt tttcccacgt
    23281 tctagatctg caattgattg agctaagtgt tcagcattat ttgggttctg ttggaggtaa
    23341 agtgtttcca tcatggagtt ataatctgat tctgacatga ttactacgtt tttatcatca
    23401 gtagatgtta cagttaccat atcactatca tcatttactt ttgtcataag tgcctttaaa
    23461 ttctgtcgag cgtatgaata atttttaata atcatattta tcgcctcctt ttaacacacc
    23521 tcaattgtac aaatatctgt acaataaaac aagcgacaca gaaaaaaact actaatcaag
    23581 atttcgcacg gggaagaatc aatacctatc ctgtactgat tccctactaa acaatgttta
    23641 catgataatt tccacctatt tagacttcat acattaaaaa gacaatctct atcatatcgc
    23701 taatagaaat tgccttttcg tattgtccta ataaattggt atcacttact gatctcaaca
    23761 attaagacta tttgatttta tcttttaata acttctcata actttcataa tcatatggat
    23821 cttcaacttt ctcgccatta ataaatgcag ttggtgtcgt ttttatatga ttatctttcg
    23881 ctattttttt atctttctct gcagctttcc aagacttgct atcttttgtc ttgtaatctt
    23941 ttataatttt attttccgtc tctttatcta aatgcagttg tttaatatgt ttatctaata
    24001 gttcttttgt taaccattct ttattttcat cttgctgggc agcaaataat tgcttttgaa
    24061 aatctaaaaa tgatttaggt gcatacatca atactgcatg actcgcacgc gaaccaacaa
    24121 ttgagtcttt acctaagaaa gctaaattga caaattggta ttccactttg tgattatcta
    24181 tataattttt acgcaacttt ggcatgactt tttcatctaa ttctttacaa taaggacatt
    24241 tatagtcgcc atatacgaca actaatggtt tgccgttttt cgaagatgtc gttgctgatt
    24301 cttttttacc gcaagctgtt aaaattaaca tgctcactat aaataatgtt agtaattttt
    24361 tagtcataat aactcctatt catatctagt tcgtcatatt ttcttcatga taatccgcat
    24421 catgttgttg ataatatcgt ctcgaatcaa aatcttgctt atatgataca cgtttatcac
    24481 taaaatcata tgcataataa tgcacttcat catcattact caaaggttta taagctaaaa
    24541 tgataatttt atccttatca tagacataaa tattagcatc tttgcgttca aaatgatcaa
    24601 cacgatcacc gttgcctttt ttggcaagtt gttcttgttt ttgattttga attttaactg
    24661 cttcatctat ttctttcaca tatttatcat taccacatcc tgatataaag actagtaata
    24721 ataataccgt cgccacaaat cgcttcaatg ctcccactcc tactatcaac ttccaactaa
    24781 ctttcaatat aattaatact atacaccgtc aaacattaat gcgctacaac tactaccaat
    24841 gcatttaata taaatatcca aagaaataac agttatgtat agtcaaagaa aaatatattt
    24901 cattttctat gtgtatttgt aatcagtttt tgataaaata aaaaaaatag cattattaat
    24961 aaattcaaaa attatagttc aattcagaga gggatgggat aaaatgaact ttgtaacgtt
    25021 gacttcggat gagttcaatg cgtttacaac aaagcatttt tcacattaca cacaatcagc
    25081 tattcattac aatcatagag ttgatttaaa aggcgatgtg catcttgtag gggttaaaga
    25141 tgacaatggt caagtgattg caggatgctt attgacagaa gcacgcacac ttaaattttt
    25201 caaatatttt tatacacatc gcgggccagt gatggattat acaaatcaat cattagtagc
    25261 atttttcttt aaagcattaa cgtcatattt aaagaaacac aattgtttat atgtccttgt
    25321 agatccatat ttaattgaaa atttacgcaa tgcagacggt gaaattgtta aatcttatga
    25381 taaccgagca tttgttagaa caatggataa attaggttat aaacaccaag gtttccctgt
    25441 aggttatgat tcaatgagcc aaatccgttg gctgtcagtg ttagatttaa aagataagac
    25501 tgaagaccaa cttttaaaag aaatggatta tcaaacgaga cgtaatatta aaaaaacata
    25561 tgatattggt gtcaaaacta aaacgttaac gattgatgaa acgcaaactt ttttcgactt
    25621 attccatatg gctgaggaaa agcacggttt caaattccgt gagttaccat actttgaaga
    25681 aatgcaaaag ttatacgatg accacgccat gttaaagttg gcgtatattg atttaaacga
    25741 gtatttaaaa acgttacaat taaagcaaca acaattaaca gctgaactct caggtgttga
    25801 agaagcattg gaagaaagtc ctaattcaaa gaaaaataaa acgaaacgca cacagctaga
    25861 acaacagcta aatagcaata agcgtaaaat cgacaataca atagaacaaa ttgaacaaga
    25921 tggtgcagtc ttaaacttag cttctgcttt atttatctac aatgagcatg aagtttatta
    25981 cttatctagt ggttcaaacc ctaaatataa tgcttatatg ggttcctacc atttgcagtg
    26041 ggaaatgatt aagtttgcta aagcgcatca tattgatcgc tataattttt atggtattac
    26101 cggtgacttt tcagagtcat cagaagacta tggcgtccaa caattcaaaa aaggttttaa
    26161 cgcacatgta gaagagtata tcggtgactt tattaagcct atcaaaccat tactatataa
    26221 ggtacaaacg tacttaaatc ataaacgtcg ttaaaatatc gctccaagat tatgacaaca
    26281 taacaaagaa ccacgcatca tgtatatggc ttcatcgcca tactaaaaca tgatacgtgg
    26341 ttctatttga ttattcttca tttataacat ttaagaaacg tcttaattct tctgttttcg
    26401 gacgattgaa catctcttct ggagcccctt gttctccgat catgccttca tgaataaata
    26461 caatgttatt agatacttct ttagcaaaac gcatttcatg tgtcacaatg accattgtca
    26521 tgccttcatt agccaaatct ttaataacct ttaaaacatc attcacaagt tcaggatcaa
    26581 gtgcagatgt tggttcatca aacaacatca ctttagggtt cattgctagt gctcttgcaa
    26641 tagcaacacg ttgttgttga ccacctgata atgcatgtgg acgttgatct ttgacatgtg
    26701 ttaaaccaac tttctcaagt aactcaagtg atttcccacg tgcctcatcc tttttcaact
    26761 ttttaactgt gataagacct tccattacat tttctaatgc cgtcttatgc ggaaaaaggt
    26821 tataactttg aaataccata ccagactgtt tacgaacttc tatttgtgat tttttatctt
    26881 tagatgtata tgttttgccg ttaacataaa ctgtaccttc agttggaatt tctaatgcat
    26941 taatcatacg taacaatgtt gttttacctg aaccagatcg accgattaag gttacaacct
    27001 caccttgttc aacagataaa tcaatacctt tgatgacttc aacatcatta aatgatttat
    27061 ggatattgtt caattgaatc atgagcgata ccctctttca atataagatt catagatacc
    27121 ttggataatt gaaataataa agcataccac ccagtacatt agcgcaacta acacataaat
    27181 tgttaaatat tcatatgttg tagacgcaac ttcttgagct tttctaaaca tttcagccac
    27241 taaaataaat cctaataatg atgtatcttt gattaaactt aaaaatgtat tacctagtgc
    27301 aggaatcgac actcgaattg cctgcggtaa aatgatacgt tgtatcgttt gaccatacgt
    27361 cataccgatg gaatatgcag cttctgtttg tcctttcggt atagaaataa taccgccacg
    27421 aataatttcc gaagcatacg cacctacatt taatgataaa ccaataatag cagccactac
    27481 aggtgccaat gtccattggt tgtcagcgtc atttgttaat aatctaccta attctggaat
    27541 accataaaat atgataaata gttgtactat cattggtgtt cctcgaataa tagatacata
    27601 gacacgtgaa atacttctta aaattttact cgttgaaatt cgcattaatg ctgtaaataa
    27661 tgcaataatc aatcctaaaa caaatgtaac taatgtaata ggaattgaat atttgaccaa
    27721 accttctagc ataggtccga aagcttgttt tgcagcatct agcgcatgtt gttgttcgct
    27781 atttagattt agaaacatct tgaccaaacc atttcttacc tattttagct aattcaccgt
    27841 tttcctcgat ttttttcaag ccatcattga atttttgaac tgtttcatca tctgcttttt
    27901 tagaaaatgc aaatgcagat ctactttgtt cagcattacc tttgattgct ttgatcttag
    27961 cattaggttt ttgtttttta taatccaagt atgacagact atcattaaat gtaccatcaa
    28021 cacgcttaga caataataaa tccattgatt ggttaaagcc atcaactttt gtaatatcag
    28081 cacctttatc cttagctaat ttaccataat tagatgtgaa tgtttgtgct aacttcttac
    28141 ctttaacatc atcaaaatct ttaatatctt tttcattttc acgaataact aaaacagcac
    28201 ttgagaatgt gtaaggctta gaaaatttat atttcttttc tctatcagga ttaataccta
    28261 cttggttcgc gattacatca aaacgccctg cgtctaaacc tgcaaacata gaatcccaag
    28321 aagtttcatt aaatttaagt tttaaacctt cttctttagc cactgcttta ataacatcaa
    28381 tatcgtaacc agttaattta ccatctttat cgtggaaact aaatggtgca taagtcccct
    28441 cagtcccaac attaattgtc ttgctatctt tactagcttc cttgtctttc gacgaattgt
    28501 ttccgcatgc agccaatatg aaaacgaaag ctatcatcac aaataaaagt cttttcatag
    28561 aatatatctc cttattctta ttattctaat cggaataaaa atattttaat ctgaaatgcc
    28621 ggataagtca atatgttgaa cttttgctaa aaagctttat atagctagca acttatattt
    28681 attgacgaga atcaacttct tttttcttac cttgtaacat aaatgaacaa aagaaactaa
    28741 caactgtaat caataatgca aataaaaatc cagcgtgata accatgcaac atcgtatcaa
    28801 ctttaatttg attcatcata tcaattttgt tcatgccatt atagtctgac atagttggag
    28861 aaaagttttt gcttgcatgg gataaaatag taattaatgc agctgttccg atagaaccag
    28921 caatttgttg tactgtgttt gtcatagatg aaccatgtgc attcatttct ggctttaatt
    28981 gattcatcgt atgggtcatt actggaatta atcctaacgc gataccaacc attcgaatcg
    29041 cataaactgt tgccaacatg attgttgatg tttgttcatc cattacaaca aaataagccg
    29101 tagtaataac aacaatcgcc atacctacta aagcaagatt tctaggacca aacttttcat
    29161 ataaagcacc cgaagtcatc gacataaatg ccataacaat tgctcctggt aataaagtta
    29221 atccagaatc taaagctgaa cgatgcaata aattttgcac aaagataggt aaaatcgttt
    29281 ccgaaccaat catcgatacc attgtgacac ccataataat gataccaact gtaaattgtt
    29341 tatttttaaa tacagcaaaa tttaataatg gtgttgatag ccgatattga cgtaatacaa
    29401 ataatgcgac taaaacaacg cctccaatca tagatactaa tacgatagga ttatcaaaac
    29461 ctttttctga aattgaactc gttccataca ataacccgcc gaaacctagt acagaaaaaa
    29521 tgacagaaat aaaatcaata ggtactttaa ttgtagttcc aacatttttt atcgttttaa
    29581 atccaattaa aaatgtcaca gctgcaattg gagcgacaac atggaaaagc gatctccagt
    29641 taaaatattc aacaaggtaa cctgaaagag taggtccaat agctggtgct aaaccaatta
    29701 ccaaaccaaa tatccccata tatttaccgc gttcatgtgg ttggaaaaca tccaaaatcg
    29761 ttgtcatcat caatggcatc ataatacctg cgcctaacgc ctgaataatt ctagcaacta
    29821 ataatgttgc aaagtgcgga ctcaagccgc cgagtaatgt acctaagaaa aagatagaaa
    29881 tacccactaa aaacacttgt cttgttgtat aacgttgtat aacaagcgcg gacaaaggaa
    29941 taacaatccc attagtcaat aaaaaagctg ttgtcagcca ttgaacttgt gtatatgaaa
    30001 tttcaaaatc tttcataata cttggtaaag ccgtcactaa tagtgtttca tttaataatc
    30061 caaaaaatcc acccatcagc atagtaataa tcatcgttaa tttttgtttc ttcgacattt
    30121 aaagcttccc cctcaccatc taaaaaacga cacacatttt tagatatccg gtaattatac
    30181 ccattttcca aaaaattagc acgactttat tacaatttct ttaaaacgta atcattacta
    30241 tttacatatg agtagttatc ggtcataata tatttacaag gagggataga gatgaaatta
    30301 gatttacaga ctgctcgtcg taatttaaat agccctaaca ttaaaacaag aaagcgtgct
    30361 ttaaagatta ttaagcaaca taaaagagcg aaataattgt tttaatttga ctatattgta
    30421 tgtctaacta tattttcgag tatccctagc tcgttaatat aaactctata cttaactatt
    30481 tccttacatt acttcacata tttaagagct gcatatacac tcactccttg tgtacatgca
    30541 gctctttttt tataagtagt atttatctat aacttctaaa tcatccgtta attcataaac
    30601 aagcggtgca cctgttttaa tttcataatt aatgatatct tcatctgaca catcttcaag
    30661 atatttaatc aatgcgcgaa ttgaatttcc gtgtgcagaa actaataccg tttgaccatc
    30721 tagcaaatat tgtgaaatat gatctgtcca aaatggtatc actcgaacta aagtatcttt
    30781 cagactttca gaataaggca tcatacgttt atctaaatga ttatatcgac gatcagctaa
    30841 gtaagcttca cgttgttctt cggtttcagc aggtggtttc acatcataag aacgacgcca
    30901 aatatgtact tgttcttctc caaattcttt tctagcatca tctttattta agccttgcaa
    30961 tccaccatag tggcgttcat ttaaacgcca gcttttatat acaggaatcc attgttgttt
    31021 agattcagtt aaaatataat gcgttgtatc taaagcacgt gttaataacg atgtaaaagc
    31081 tacatcgatg gcaatgttat tttctcttac tttttcacct gctctagtcg cttcattaat
    31141 accttgttca gataaattaa catcttccca tccagtaaat aagtttttag cattccactc
    31201 gctttgtcca tgacgacata aaattaattt tggcataact tataacctct ttcctttaat
    31261 ctttaggacg ttatttcagg gatattttaa gatgatttaa tcttagtaat tttcttttca
    31321 atatatttta aaattcaatg attaaatcaa ttatcactag acattaaata cataaatcct
    31381 attccccatt ttcatttttt aattcataaa tgaatcaata accacctaat aacaaatcat
    31441 attatacacc tttgttcgct atttttctaa ggtttaaaaa atatttttag gtaaacctaa
    31501 aaatagatgt aataaaaacg cctcctcaga tatttatata tctatgaaga cgtttaaata
    31561 cattatagat ggtctggttc tgggtgaacg tatactgagg aaataccttt tttgtgcaaa
    31621 tgatgttcga cattgtcaca aatttgatgc gcttctacta aggaaaggtt agcatctaca
    31681 acaattgtga catcaataaa cacactactt ccatggtaac gccctttaat acttttaact
    31741 tcttgtactt catcaacttc taaaatatca ttgcgatacg cttctaattc agtttcattg
    31801 aaaccatcac tcaacataaa aattgcttct ttaaaaatac caaaaccagt ataaacgatt
    31861 agtaagccta gtaatgttgc taaaataata tcgacaattg ggaaaccgat ttgcgtaaaa
    31921 attaatccta tcgctgttcc aatgctgact aaactatccg ataaattatc tttggcagcc
    31981 gaatttaaag aactactttt cgttcttttc gctagtcttt gattgactgc aaatacaatc
    32041 aacattacaa gaccactgat taagctgacg ataattgtta ttgcgttagg tacaacgtca
    32101 tcttctttga acaaacgagg tgcattttga ataactactt ggatacctac aaacataatg
    32161 acaaatgaca ccaataatga agaaatattt tcagacttca aatggccata aggatgattt
    32221 cgatcggcag gtttaattga aattttcaat ccaataataa cagctaaaga aacgataata
    32281 tctgtcatat tgtttaatgc atcggctctt acagctgcag agttaaagac aaaacccgtg
    32341 acatacttaa caatagataa gattatatat acaattaaac tcaaataagc accgcgttgc
    32401 gccaatttaa gattttcatt atgagacatg cgttgaacca ccttgaatta gtatagtaac
    32461 aatattatga atgattcatt ttaattttac aacgttttta atttttataa atttttataa
    32521 aattaaacta atttattcat tcgcaacccc taaaaataat ttttagcctt tctgcgaatt
    32581 ttatgagcta gaaaggcgcc caactctccc tgtttgttaa ctttcgcctc gaaagtttct
    32641 atgttgggac cctatgcatt agtagcgaag ctatctaatg tgttccttta ttttctgcga
    32701 attttatgag ctagaaaggc ttatgcagtt gacgttttac gtccaactgc gttcctccgt
    32761 cttcttcaaa tttatttgtt agaaaggcac ccaactctcc ctgtttgtta actttcgcct
    32821 cgaaagtttc tatgttagaa ccctatgcat gagttgcgaa gctatctaat gtcgtgaact
    32881 aattatatag aagaaaaagt gcatcaatga caaattaaat gagatttcta ctctaccaaa
    32941 ctctcttcga aagacaattt tctcctctat ttattagcaa actattgcat ttctccatat
    33001 agtacttcct tacttaaaat acgctgaatg ttctgaatta aacgcttttt tacatagtta
    33061 acactagtta atctattagt taacattagt taataattag ttaatttcca tttgtattct
    33121 catgtgataa attctaaaag catacaataa atttaatatg taaaaagaaa gggaatacac
    33181 atgaaaaata aatatatctc gaagttgcta gttggggcag caacaattac gttagctaca
    33241 atgatttcaa atggggaagc aaaagcgagt gaaaacacgc aacaaacttc aactaagcac
    33301 caaacaactc aaaacaacta cgtaacagat caacaaaaag ctttttatca agtattacat
    33361 ctaaaaggta tcacagaaga acaacgtaac caatacatca aaacattacg cgaacaccca
    33421 gaacgtgcac aagaagtatt ctctgaatca cttaaagaca gcaagaaccc agaccgacgt
    33481 gttgcacaac aaaacgcttt ttacaatgtt cttaaaaatg ataacttaac tgaacaagaa
    33541 aaaaataatt acattgcaca aattaaagaa aaccctgata gaagccaaca agtttgggta
    33601 gaatcagtac aatcttctaa agctaaagaa cgtcaaaata ttgaaaatgc ggataaagca
    33661 attaaagatt tccaagataa caaagcacca cacgataaat cagcagcata tgaagctaac
    33721 tcaaaattac ctaaagattt acgtgataaa aacaaccgct ttgtagaaaa aatttcaatt
    33781 gaaaaagcaa tcgttcgtca tgatgagcgt gtgaaatcag caaatgatgc aatctcaaaa
    33841 ttaaatgaaa aagattcaat tgaaaacaga cgtttagcac aacgtgaagt taacaaagca
    33901 cctatggatg taaaagagca tttacagaaa caattagacg cattagttgc tcaaaaagat
    33961 gctgaaaaga aagtggcgcc aaaagttgag gctcctcaaa ttcaatcacc acaaattgaa
    34021 aaacctaaag tagaatcacc aaaagttgaa gtccctcaaa ttcaatcacc aaaagttgag
    34081 gttcctcaat ctaaattatt aggttactac caatcattaa aagattcatt taactatggt
    34141 tacaagtatt taacagatac ttataaaagc tataaagaaa aatatgatac agcaaagtac
    34201 tactataata cgtactataa atacaaaggt gcgattgatc aaacagtatt aacagtacta
    34261 ggtagtggtt ctaaatctta catccaacca ttgaaagttg atgataaaaa cggctactta
    34321 gctaaatcat atgcacaagt aagaaactat gtaactgagt caatcaatac tggtaaagta
    34381 ttatatactt tctaccaaaa cccaacatta gtaaaaacag ctattaaagc tcaagaaact
    34441 gcatcatcaa tcaaaaatac attaagtaat ttattatcat tctggaaata atcaatcaaa
    34501 aatatcttct ctagttttac atcatttttt aaataatttt cgtaacaaac cgtgattaaa
    34561 aagaaccgtt gattctcaat cgaatctacg gttctttttt cattttccat caattaaatg
    34621 cttcttcgct atttgtcagc ccactttttt acctgcaact tgttaaataa tccttacatc
    34681 gttaacgaat agttcatcat ttagttgaat cagctcaact ttattaactt catattttca
    34741 caaactattg cgcaattcat tccttttcca ctacaagcac cataattaaa caacaattca
    34801 ataaaataag acttgcaaag catagttatg tagctatata aacgcctgcg accaataaat
    34861 cttttaaaca taacataatg taaaaacatc atttaacaat gctaaaaatg tctcttcaat
    34921 acatgttgat agtaattaac ttttaacgaa cagttaattc gaaaacgctt acaaatggat
    34981 tattatatat atgaacttaa aattaaatag aaagaaagtg atttctatga ttaaaaataa
    35041 aatattaaca gcaactttag cagttggttt aatagcccct ttagccaatc catttataga
    35101 aatttctaaa gcagaaaata agatagaaga tatcggccaa ggtgcagaaa tcatcaaaag
    35161 aacacaagac attactagca aacgattagc tataactcaa aacattcaat ttgattttgt
    35221 aaaagataaa aaatataaca aagatgccct agttgttaag atgcaaggct tcattagctc
    35281 tagaacaaca tattcagact taaaaaaata tccatatatt aaaagaatga tatggccatt
    35341 tcaatataat atcagtttga aaacgaaaga ctctaatgtt gatttaatta attatcttcc
    35401 taaaaataaa attgattcag cagatgttag tcagaaatta ggctataata tcggcggaaa
    35461 cttccaatca gcgccatcaa tcggaggcag tggctcattc aactactcta aaacaattag
    35521 ttataatcaa aaaaactatg ttactgaagt agaaagtcag aactctaaag gtgttaaatg
    35581 gggagtgaaa gcaaattcat tcgttacacc gaatggtcaa gtatctgcat atgatcaata
    35641 cttatttgca caagacccaa ctggtccagc agcacgagac tatttcgtcc cagataatca
    35701 actacctcct ttaattcaaa gtggctttaa tccatcattt attacaacat tgtcacacga
    35761 aagaggtaaa ggtgataaaa gcgagtttga aatcacttac ggcagaaaca tggatgctac
    35821 atatgcttac gtgacaagac atcgtttagc cgttgataga aaacatgatg cttttaaaaa
    35881 ccgaaacgtt acagttaaat atgaagtgaa ctggaaaaca catgaagtaa aaattaaaag
    35941 catcacacct aagtaaacag ttcaatcatc ttaaaaaatc ctgggacact tcatacttgt
    36001 ctcaggattt tttaacaaat tgaatcagcc tcataacatt aaattatttt atcgtacatt
    36061 aaatttaata ataacaactg attttt
//
LOCUS       DALPQQ010000014        34266 bp    DNA     linear   BCT 22-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus strain K18-6-464
            SAMD00233528-rid16434743.denovo.014, whole genome shotgun sequence.
ACCESSION   DALPQQ010000014 DALPQQ010000000
VERSION     DALPQQ010000014.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMD00233528
            Sequence Read Archive: DRR236061
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 34266)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 34266)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001543423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001543423.1
            Genome Coverage       :: 77x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/22/2022 17:09:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,811
            CDSs (total)                      :: 2,743
            Genes (coding)                    :: 2,689
            CDSs (with protein)               :: 2,689
            Genes (RNA)                       :: 68
            rRNAs                             :: 2, 4, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 4, 2 (16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 54
            CDSs (without protein)            :: 54
            Pseudo Genes (ambiguous residues) :: 0 of 54
            Pseudo Genes (frameshifted)       :: 27 of 54
            Pseudo Genes (incomplete)         :: 27 of 54
            Pseudo Genes (internal stop)      :: 10 of 54
            Pseudo Genes (multiple problems)  :: 10 of 54
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..34266
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMD00233528-rid16434743.denovo.014"
                     /strain="K18-6-464"
                     /db_xref="taxon:1280"
                     /geo_loc_name="Japan: Niigata"
     gene            complement(131..1402)
                     /locus_tag="O7798_000589"
     CDS             complement(131..1402)
                     /locus_tag="O7798_000589"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500271.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional folylpolyglutamate
                     synthase/dihydrofolate synthase"
                     /protein_id="HDC2862863.1"
                     /translation="MNYLESLYWIHERTKFGIKPGVKRMEWMLAQFNNPQNNIKGIHV
                     GGTNGKGSTVAYLRTALVENGYEVGTFTSPFIETFNERISLNGVPISNDAIVELVSRI
                     KPVSEMMERETDLGVATEFEIITAMMFLYFGEIHPVDFVIVEAGLGIKNDSTNVFTPV
                     LSILTSIGLDHTDILGGTYLDIARDKGAIIKPNVPVIYAVKNEDALKYVRERAIEQHA
                     KPIELDREIVVVSQNDEFTYRYKDYELETIILSMLGEHQKQNAALAITALIELNEQGL
                     IELDFNKMIDGIESVRWTGRIEQVHDKPLIILDGAHNSESIDALIDTIKQYHDKEKVD
                     ILFSAINGKPINEMVKHLSLIAHTFYATEFDFPKALRKEEIVGSIENDEIQLVDDYVE
                     FIKNYQGDTLVITGSLYFISEVKSKLDFEAL"
     gene            complement(1415..4045)
                     /locus_tag="O7798_000590"
     CDS             complement(1415..4045)
                     /locus_tag="O7798_000590"
                     /EC_number="6.1.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500272.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="valine--tRNA ligase"
                     /protein_id="HDC2862864.1"
                     /translation="MEMKPKYDPREVEAGRYEEWVKNGYFKPSEDKSKETYTIVIPPP
                     NVTGKLHLGHAWDTTLQDIITRMKRMQGYDTLYLPGMDHAGIATQAKVEAKLNEQGIT
                     RYDLGREKFLEQAWDWKEEYASFIRAQWAKLGLGLDYSRERFTLDEGLSKAVKKVFVD
                     LYNKGIIYRGERIINWDPKARTALSDIEVIHEDVQGAFYHFKYPYADGEGFIEIATTR
                     PETMLGDTAIVVNPNDERYKDVIGKTVILPIVGRELPILADEYVDIDFGSGAMKVTPA
                     HDPNDFEIGQRHQLENIIVMDENGKMNDKAGKYEGMDRFDCRKQLVKDLKEQDLVIKI
                     EDHVHSVGHSERSGAVVEPYLSTQWFVRMEDLAKRSLDNQKTDDRIDFYPQRFEHTFN
                     QWMENIRDWTISRQLWWGHQIPAWYHKETGEIYVGEEAPTDIENWQQDEDVLDTWFSS
                     ALWPFSTLGWPDLESEDFKRYYPTNALVTGYDIIFFWVARMIFQGLEFTDRRPFNDVL
                     LHGLVRAEDGRKMSKSLGNGVDPMDVIDEYGADSLRYFLATGSSPGHDLRYSTEKVES
                     VWNFINKIWNGARFSLMNIGEDFKVEDIDLSGNLSLADKWILTRLNETIATVTDLSDK
                     YEFGEVGRALYNFIWDDFCDWYIEMSKIPMNSNDEEQKQVTRSVLSYTLDNIMRMLHP
                     FMPFVTEKIWQSLPHEGDTIVKASWPEVRESLIFEESKQTMQQLVEIIKSVRQSRVEV
                     NTPLSKEIPILIQAKDKEIETTLSQNKDYLIKFCNPSTLNISTDVEIPEKAMTSVVIA
                     GKVVLPLEGLIDMDKEISRLEKELAKLQSELDRVDKKLSNENFVSKAPEKVINEEKRK
                     KQDYQEKYDGVKARIEQLKA"
     misc_binding    complement(4089..4390)
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00230"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="T-box leader; Derived by automated computational
                     analysis using gene prediction method: cmsearch."
                     /bound_moiety="tRNA"
                     /db_xref="RFAM:RF00230"
     gene            4448..5008
                     /locus_tag="O7798_000591"
     CDS             4448..5008
                     /locus_tag="O7798_000591"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500273.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-3-methyladenine glycosylase I"
                     /protein_id="HDC2862865.1"
                     /translation="MNECAFGTKDPVYLDYHDHVWGQPLYDSKALFKLLALESQHAGL
                     SWLTILKKKEAYEEAFYDFEPEKVAQMTAQDIDRLMTFPNIVHHRKKLEAIVNQAQGY
                     LKIEQAYGSFSKFLWSYVNGKPKDLQYEHASDRITVDDTATQLSKDLKQYGFKFLGPV
                     TVFSFLEAAGLYDAHLQDCPSKPKHN"
     gene            complement(5231..6304)
                     /locus_tag="O7798_000592"
     CDS             complement(5231..6304)
                     /locus_tag="O7798_000592"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500274.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AbrB family transcriptional regulator"
                     /protein_id="HDC2862866.1"
                     /translation="MAMIYRNNFIVFVLSFFISILLYSSHVLLPFMFGPIIASIICVK
                     VFKLDIKWPFLLSELGIVLLGVQIGSTFTKNVVMDIKNNWLSIIVVSISILLIAIVMA
                     FVFKKIARINTETAILSVIPGALTQMLVMAEQDKRANLLVVSLTQTSRIIFVVVLVPF
                     ISYFFHDGNMHANGKLTKVLPLSQVLNIGQIVILAIAIFIVYLIMSKIKFPTFQLLAP
                     LIVLIVWNFSTGLTFTLDHWLLNMAQLIYMIRIGVQIAHLLSDLKGRLAIAITIQNIM
                     LIIGALIMVYIIHFFDNNPINELFLGAAPGGVNQIVLVALATGADVAMITSYHIFRIF
                     FILFIIAPGINYFLKYRSNKRED"
     gene            complement(6338..6439)
                     /locus_tag="O7798_000593"
     CDS             complement(6338..6439)
                     /locus_tag="O7798_000593"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500275.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDC2862867.1"
                     /translation="MGGDLIVKVHICFVVKTASGYCYLNKREAQAAI"
     gene            complement(6500..7786)
                     /gene="hemL"
                     /locus_tag="O7798_000594"
     CDS             complement(6500..7786)
                     /gene="hemL"
                     /locus_tag="O7798_000594"
                     /EC_number="5.4.3.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500276.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate-1-semialdehyde 2,1-aminomutase"
                     /protein_id="HDC2862868.1"
                     /translation="MRYTKSEEAMKVAETLMPGGVNSPVRAFKSVDTPAIFMDHGKGS
                     KIYDIDGNEYIDYVLSWGPLILGHRDPQVISHLHEAIDKGTSFGASTLLENKLAQLVI
                     DRVPSIEKVRMVSSGTEATLDTLRLARGYTGRNKIVKFEGCYHGHSDSLLIKAGSGVA
                     TLGLPDSPGVPEGIAKNTITVPYNDLDALKIAFEKFGNDIAGVIVEPVAGNMGVVPPI
                     EGFLQGLRDITTEYGALLIFDEVMTGFRVGYHCAQGYFGVTPDLTCLGKVIGGGLPVG
                     AFGGKKEIMDHIAPLGNIYQAGTLSGNPLAMTSGYETLSQLTPETYEYFNMLGDILED
                     GLKRVFAKHNVPITVNRAGSMIGYFLNEGPVTNFEQANKSDLKLFAEMYREMAKEGVF
                     LPPSQFEGTFLSTAHTKEDIEKTIQAFDTALSRIVK"
     gene            complement(7834..8808)
                     /gene="hemB"
                     /locus_tag="O7798_000595"
     CDS             complement(7834..8808)
                     /gene="hemB"
                     /locus_tag="O7798_000595"
                     /EC_number="4.2.1.24"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001633925.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="porphobilinogen synthase"
                     /protein_id="HDC2862869.1"
                     /translation="MKFDRHRRLRSSATMRDMVRENHVRKEDLIYPIFVVEKDDVKKE
                     IKSLPGVYQISLNLLESELKEAYDLGIRAIMFFGVPNSKDDIGTGAYIHDGVIQQATR
                     IAKKMYDDLLIVADTCLCEYTDHGHCGVIDDHTHDVDNDKSLPLLVKTAISQVEAGAD
                     IIAPSNMMDGFVAEIRRGLDEAGYYNIPIMSYGVKYASSFFGPFRDAADSAPSFGDRK
                     TYQMDPANRLEALRELESDLKEGCDMMIVKPALSYLDIVRDVKNHTNVPVVAYNVSGE
                     YSMTKAAAQNGWIDEERVVMEQMVSMKRAGADMIITYFAKDICRYLDK"
     gene            complement(8811..9479)
                     /locus_tag="O7798_000596"
     CDS             complement(8811..9479)
                     /locus_tag="O7798_000596"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500278.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="uroporphyrinogen-III synthase"
                     /protein_id="HDC2862870.1"
                     /translation="MKPVVVMTQTNDMQSDLVSIIHKPFIDIKPLNFDIHLLNQRYDW
                     LIFSSKNAVKFFYKYLKGINVDNIAVIGSKTAQYCESLGIRVDFMPNDFSQEGFLKSF
                     NQTNQKILLPSSELARPLLLAALSKDNEVVKIDLYTSVPNKQNIQDVKEMIEHQQIDA
                     LTFSSSSAVRYYFNEGFVPKFKSYFAIGEQTARTIKSYQQPVTIAEIQTLESLIEKIL
                     ESRG"
     gene            complement(9501..10427)
                     /gene="hemC"
                     /locus_tag="O7798_000597"
     CDS             complement(9501..10427)
                     /gene="hemC"
                     /locus_tag="O7798_000597"
                     /EC_number="2.5.1.61"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500279.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydroxymethylbilane synthase"
                     /protein_id="HDC2862871.1"
                     /translation="MRKLVVGSRRSKLALTQSQQFIDKLKAVEPNLEIEIKEIVTKGD
                     RIVDKQLSKVGGKGLFVKEIQHELFEKNIDMAIHSLKDVPSVIPEGLTLGCIPDRELP
                     FDAYISKTHTPLSQLPEGSIIGTSSLRRGAQILSKYPNLEIKWIRGNIDTRLEKLQTE
                     DYDAIILAAAGLRRMGWSDDIVTSYLDRDTLLPAIGQGALGIECRSDDEELLTLLSKV
                     HNDEVAKCVTAERTFLAEMDGSCQVPIAGYATISDQNEIEFTGLIMTPDGKERFEYTM
                     NGTDPVELGKTVSNKLKEQGAYEIIKRLNEQH"
     gene            complement(10469..11284)
                     /gene="ccsA"
                     /locus_tag="O7798_000598"
     CDS             complement(10469..11284)
                     /gene="ccsA"
                     /locus_tag="O7798_000598"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500280.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c biogenesis protein CcsA"
                     /protein_id="HDC2862872.1"
                     /translation="MQENLFIRFNEIILLIYLISIICYFYDFVQKSHKIRSLGIYLLG
                     IVWVLQTISLSIFIIQTRHIPLGSISDVFYTLSWLIISISLILNLIKVLNFSVFFLNL
                     IGLTLLGMNTFQPTHYTNKVQKIAVVDELLLVHIGLAVLSYVFFALAFVNALLYIMQY
                     RNLKEKRFDQKYFRIGSVATLESIVFYSTLSGWIILIFSIILGTQWGVISVGERIFID
                     PKVILSSIITVLYGSYILLRINKWLNSRYLIYYNIILFCLNMINLFFATHFVN"
     gene            complement(11306..12652)
                     /locus_tag="O7798_000599"
     CDS             complement(11306..12652)
                     /locus_tag="O7798_000599"
                     /EC_number="1.2.1.70"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500281.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamyl-tRNA reductase"
                     /protein_id="HDC2862873.1"
                     /translation="MHFIAISINHRTADVALREQVAFRDDALRIAHEDLYETKSILEN
                     VILSTCNRTEVYAVVDQIHTGRYYIQRFLARAFGFEVDDIKAMSEVKVGDEAVEHLLR
                     VTSGLDSIVLGETQILGQIRDAFFLAQSTGTTGTIFNHLFKQAITFAKRAHNETDIAD
                     NAVSVSYAAVELAKKVFGKLKSKQAIIIGAGEMSELSLLNLLGSGITDITVVNRTIEN
                     AMKLAAKHQVKYDELSSLPNLLESADIVISSTSAQSYIITNEMIERIAENRKQDSLVL
                     IDIAVPRDIEPGISAITNIFNYDVDDLKGLVDANLRERQLAAATISEQIPAEIHAHNE
                     WISMLGVVPVIRALREKAMAIQAETMDSIDRKLPGLSERERKIISKHTKSIINQMLKD
                     PIKQAKELSSDKKSNEKLELFQNIFDIEAECPHEQAKQQKESKVKEISARRIFSFE"
     gene            complement(12869..13459)
                     /locus_tag="O7798_000600"
     CDS             complement(12869..13459)
                     /locus_tag="O7798_000600"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500282.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YihA family ribosome biogenesis GTP-binding
                     protein"
                     /protein_id="HDC2862874.1"
                     /translation="MKVNPNNIELIISAVKEEQYPETELSEVALSGRSNVGKSTFINS
                     MIGRKNMARTSQQPGKTQTLNFYNIDEQLIFVDVPGYGYAKVSKTQREKFGKMIEEYI
                     TKRENLQLVIQLVDLRHDPTQDDILMYNYLKHFDIPTLVICTKEDKIPKGKVQKHIKN
                     IKTQLDMDPDDTIVSYSSIQNNKQQQIWNLIEPYIS"
     gene            complement(13613..14875)
                     /gene="clpX"
                     /locus_tag="O7798_000601"
     CDS             complement(13613..14875)
                     /gene="clpX"
                     /locus_tag="O7798_000601"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001830765.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent Clp protease ATP-binding subunit
                     ClpX"
                     /protein_id="HDC2862875.1"
                     /translation="MFKFNEDEENLKCSFCGKDQDQVKKLVAGSGVYICNECIELCSE
                     IVEEELAQNTSEAMTELPTPKEIMDHLNEYVIGQEKAKKSLAVAVYNHYKRIQQLGPK
                     EDDVELQKSNIALIGPTGSGKTLLAQTLAKTLNVPFAIADATSLTEAGYVGDDVENIL
                     LRLIQAADFDIDKAEKGIIYVDEIDKIARKSENTSITRDVSGEGVQQALLKILEGTTA
                     SVPPQGGRKHPNQEMIQIDTTNILFILGGAFDGIEEVIKRRLGEKVIGFSSNEADKYD
                     EQALLAQIRPEDLQAYGLIPEFIGRVPIVANLETLDVTALKNILTQPKNALVKQYTKM
                     LELDDVDLEFTEEALSAISEKAIERKTGARGLRSIIEESLIDIMFDVPSNENVTKVVI
                     TAQTINEETEPELYDAEGNLINNSKTSA"
     gene            complement(15026..16327)
                     /locus_tag="O7798_000602"
     CDS             complement(15026..16327)
                     /locus_tag="O7798_000602"
                     /EC_number="5.2.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500284.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="trigger factor"
                     /protein_id="HDC2862876.1"
                     /translation="MTATWEKKEGNEGLLTVTVPAEKVNKALDQAFKKVVKQINVPGF
                     RKGKVPRPIFEQRFGVEALYQDAIDILLPDAYGEAIDETDIKPVAQPEVSVTQIEKGK
                     DFIFEATVTVEPEVKLGDYKGLEIEKQETELSDDELQEAIDHSLGHLAEMVVKEDGVV
                     ENGDTVNIDFSGSVDGEEFEGGQAEGYDLEIGSGSFIPGFEEQLEGMKVDEEKDVVVT
                     FPEEYHAEELAGKEATFKTKVNEIKFKEVPELTDEIANELDAEANTVDEYKENLRKRL
                     AEQKATDAENVEKEEAITKATDNTTIDIPEAMVNTELDRMVSEFAQRIQQQGLDLQTY
                     FQISGQDETQLREQMKDDAEQRVKTNLTLTAIAEAEKIEATDEDIDKELEKMSKQFNI
                     SVEDIKNTLGNTDIIKNDVRIQKVIDLLRDNAKFVEGTKED"
     gene            complement(16375..16485)
                     /locus_tag="O7798_000603"
     CDS             complement(16375..16485)
                     /locus_tag="O7798_000603"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500285.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDC2862877.1"
                     /translation="MQNNTQHFNIVLTKKVDLQIYKRCDFNVCIGNRPMI"
     gene            complement(16490..17419)
                     /locus_tag="O7798_000604"
     CDS             complement(16490..17419)
                     /locus_tag="O7798_000604"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500286.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDC2862878.1"
                     /translation="MSDIIQFPNSSKKLYKDIKRAEQDQNYDLMYEYIVQYERQFELT
                     EEIAMMKCRMLYETGSFLELREETIVLLKTGIQQYDALMIYYVKSLIGLGQYFEAVEV
                     IHQIIDEVKDHKTRMALHPLKEFAKSKLIEDEKRLTQSLADFDTLSMREQTHLILKLI
                     DNGHFQFQETVLYILKSNTYSYNLISLMIEYLRFANCTQELTIEKYGMDVTFVPANLK
                     GLEHTTLKEKVIPNVMETLNDGALHIAEEAHHIMNNHSIMIYPIDIETLFETNKWINA
                     YECYFKNMLGLKCELQSIDAFNFIQQLDLNNNS"
     gene            complement(17438..18046)
                     /locus_tag="O7798_000605"
     CDS             complement(17438..18046)
                     /locus_tag="O7798_000605"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500287.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NUDIX domain-containing protein"
                     /protein_id="HDC2862879.1"
                     /translation="MSKFDEQIIVVPREIIFNNEKNTFNGFLNKNKPEGQNIFDALSQ
                     YEVKRRGDMEEDPSYKQLISYCLLENEHGEILVYERLSGGGEARLHGQSSIGVGGHMN
                     DVPGTESINEVLRVNAQRELEEEVGLSEQDSQNMEYIGFINDDNNEVGKVHIGVVFKI
                     TVSTNDVEAKETDTLRIKWVEKGNIESYDDFETWSALILQDL"
     gene            complement(18188..18544)
                     /gene="rplT"
                     /locus_tag="O7798_000606"
     CDS             complement(18188..18544)
                     /gene="rplT"
                     /locus_tag="O7798_000606"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500289.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L20"
                     /protein_id="HDC2862880.1"
                     /translation="MPRVKGGTVTRARRKKTIKLAKGYFGSKHTLYKVAKQQVMKSGQ
                     YAFRDRRQRKRDFRKLWITRINAAARQHEMSYSRLMNGLKKAGIDINRKMLSEIAISD
                     EKAFAQLVTKAKDALK"
     gene            complement(18591..18791)
                     /gene="rpmI"
                     /locus_tag="O7798_000607"
     CDS             complement(18591..18791)
                     /gene="rpmI"
                     /locus_tag="O7798_000607"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001830767.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L35"
                     /protein_id="HDC2862881.1"
                     /translation="MPKMKTHRGAAKRVKRTASGQLKRSRAFTSHLFANKSTKQKRQL
                     RKARLVSKSDMKRVKQLLAYKK"
     gene            complement(18820..19347)
                     /gene="infC"
                     /locus_tag="O7798_000608"
     CDS             complement(18820..19347)
                     /gene="infC"
                     /locus_tag="O7798_000608"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500291.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="translation initiation factor IF-3"
                     /protein_id="HDC2862882.1"
                     /translation="MSTIAKDQTQINDKIRAKELRLIGQDGEQIGVKSKREALEMAER
                     VDLDLVVVAPNAKPPVARIMDYGKFKFEQQKKEKEMKKKQKIINVKEIRLSPTIEEHD
                     FQTKLKNGRKFLTKGDKCKVSIRFRGRAITHKEIGQRVLEKYADECKDIATVEQKPKM
                     DGRQMFIMLAPTAEK"
     misc_feature    complement(19376..19501)
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00558"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="ribosomal protein L20 leader region; Derived by
                     automated computational analysis using gene prediction
                     method: cmsearch."
                     /db_xref="RFAM:RF00558"
     gene            complement(19576..21069)
                     /locus_tag="O7798_000609"
     CDS             complement(19576..21069)
                     /locus_tag="O7798_000609"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500292.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid permease"
                     /protein_id="HDC2862883.1"
                     /translation="MSKVQNESNNVVKRGLKDRHISMIAIGGCIGTGLFVTSGGAIHD
                     AGALGALIGYAIIGIMVFFLMTSLGEMATYLPVSGSFSTYATRFVDPSLGFALGWNYW
                     FNWVVTVAADITIAAQVIQYWTPLQGIPAWAWSALFLVIIFSLNSLSVRVYGESEYWL
                     ALIKVVTVIVFIAIGLLTIVGIMGGHVVGFEIFNKGEGPILGGNLGGSLLSILGVFLI
                     AGFSFQGTELIGITAGESENPERAVPKAIKQVFWRILLFYILAIFVIGMLIPYDSSAL
                     MGGSDNVATSPFTLVFKNAGFAFAASFMNAVILTSVLSAGNSGMYASTRMLYSMSKDK
                     LAFEAFGKTNKNGVPYMSLLVTAIIVVIIFVLQSLTKGAYEYIVAASGLTGFIAWVGI
                     AVSHYRFRRAFDKQNYDKSKLKYTAKLFPFGPLFAGFLCIVVIIGQDVDFIKTGDFNF
                     SRFLITYMGIPVFLAFFIYHKLRYKTKKIPLEQVDLRQDVSMDEIKG"
     gene            complement(21495..23432)
                     /gene="thrS"
                     /locus_tag="O7798_000610"
     CDS             complement(21495..23432)
                     /gene="thrS"
                     /locus_tag="O7798_000610"
                     /EC_number="6.1.1.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500293.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="threonine--tRNA ligase"
                     /protein_id="HDC2862884.1"
                     /translation="MEQINIQFPDGNKKAFDKGTTTEDIAQSISPGLRKKAVAGKFNG
                     QLVDLTKPLETDGSIEIVTPGSEEALEVLRHSTAHLMAHAIKRLYGNVKFGVGPVIEG
                     GFYYDFDIDQNISSDDFEQIEKTMKQIVNENMKIERKVVSRDEAKELFSNDEYKLELI
                     DAIPEDENVTLYSQGDFTDLCRGVHVPSTAKIKEFKLLSTAGAYWRGDSNNKMLQRIY
                     GTAFFDKKELKAHLQMLEERKERDHRKIGKELELFTNSQLVGAGLPLWLPNGATIRRE
                     IERYIVDKEVSMGYDHVYTPVLANVDLYKTSGHWDHYQEDMFPPMQLDETESMVLRPM
                     NCPHHMMIYANKPHSYRELPIRIAELGTMHRYEASGAVSGLQRVRGMTLNDSHIFVRP
                     DQIKEEFKRVVNMIIDVYKDFGFEDYSFRLSYRDPEDKEKYFDDDDMWNKAENMLKEA
                     ADELGLSYEEAIGEAAFYGPKLDVQVKTAMGKEETLSTAQLDFLLPERFDLTYIGQDG
                     EHHRPVVIHRGVVSTMERFVAFLTEETKGAFPTWLAPKQVQIIPVNVDLHYDYARQLQ
                     DELKSQGVRVSIDDRNEKMGYKIREAQMQKIPYQIVVGDKEVENNQVNVRQYGSQDQE
                     TVEKDEFIWNLVDEIRLKKHR"
     gene            complement(23630..23752)
                     /locus_tag="O7798_000611"
     CDS             complement(23630..23752)
                     /locus_tag="O7798_000611"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500294.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDC2862885.1"
                     /translation="MFDENMVNKLDDYYFIYGICNEYPDQDRYLKQRYLIHKLY"
     gene            complement(23845..24765)
                     /gene="dnaI"
                     /locus_tag="O7798_000612"
     CDS             complement(23845..24765)
                     /gene="dnaI"
                     /locus_tag="O7798_000612"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500295.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="primosomal protein DnaI"
                     /protein_id="HDC2862886.1"
                     /translation="MKQFKSIINTSQDFEKRIEKIKKEVINDPDVKQFLEAHRAELTN
                     AMIDEDLNVLQEYKDQQKHYDGHKFADCPNFVKGHVPELYVDNNRIKIRYLQCPCKIK
                     YDEERFEAELITSHHMQRDTLNAKLKDIYMNHRDRLDVAMAADDICTAITNGEQVKGL
                     YLYGPFGTGKSFILGAIANQLKSKKVRSTIIYLPEFIRTLKGGFKDGSFEKKLHRVRE
                     ANILMLDDIGAEEVTPWVRDEVIGPLLHYRMVHELPTFFSSNFDYSELEHHLAMTRDG
                     EEKTKAARIIERVKSLSTPYFLSGENFRNN"
     gene            complement(24765..26165)
                     /locus_tag="O7798_000613"
     CDS             complement(24765..26165)
                     /locus_tag="O7798_000613"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500296.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="replication initiation and membrane attachment
                     family protein"
                     /protein_id="HDC2862887.1"
                     /translation="MGRQAFEFGLRPKDQFKVMQHFDLNTNHLEVLNRLYTPLIGTQA
                     VGLYHFMTQFVKESHNETLILSHYIFMNELKINLLEFRQQMDLLEAIGLLKAFVKHDE
                     QETQFVYQLIQPPSAHLFFNDPMLSIFLYSEVEHRRFHELKKYFEYQQIDLSEFKQVT
                     RQFTDVFKVPSTKIDIDTSDIPINEPYQGIDLSNESFDFEMLRQILGKHFISQDIVTK
                     DAKRLITQLATLYGLTADGMKHVILNSITSGQQLSFEEMRKQARSYYLMEHENQMPKL
                     QVKSPATSSSAGKSSEVNPKPQSDEWFELLEQTSPIDMLASWSESEPTISQKTMVEEL
                     IEREKMSFGVINILLQFVMLKEDMKLPKAYILEIASNWKKKGIKTAKEAYNYAKKVNQ
                     PKNEGSSGNYQKRGSYYGQRNRISKEKTPKWLENRDKPSEEDSAKDNSVDDQQLEQDR
                     QAFLDKLSKKWEEDSQ"
     gene            complement(26166..26636)
                     /gene="nrdR"
                     /locus_tag="O7798_000614"
     CDS             complement(26166..26636)
                     /gene="nrdR"
                     /locus_tag="O7798_000614"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500297.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional repressor NrdR"
                     /protein_id="HDC2862888.1"
                     /translation="MKCPKCNSTQSKVVDSRHADELNAIRRRRECENCGTRFTTFEHI
                     EVSQLIVVKKDGTREQFSREKILNGLVRSCEKRPVRYQQLEDITNKVEWQLRDEGHTE
                     VSSRDIGEHVMNLLMHVDQVSYVRFASVYKEFKDVDQLLASMQGILSENKRSDA"
     gene            complement(26846..27871)
                     /gene="gap"
                     /locus_tag="O7798_000615"
     CDS             complement(26846..27871)
                     /gene="gap"
                     /locus_tag="O7798_000615"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500298.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I glyceraldehyde-3-phosphate dehydrogenase"
                     /protein_id="HDC2862889.1"
                     /translation="MSTNIAINGMGRIGRMVLRIALQNKNLNVVAINASYPPETIAHL
                     INYDTTHGKYNLKVEPIENGLQVGDHKIKLVADRNPENLPWKELDIDIAIDATGKFNH
                     GDKAIAHIKAGAKKVLLTGPSKGGHVQMVVKGVNDNQLDIEAFDIFSNASCTTNCIGP
                     VAKVLNNQFGIVNGLMTTVHAITNDQKNIDNPHKDLRRARSCNESIIPTSTGAAKALK
                     EVLPELEGKLHGMALRVPTKNVSLVDLVVDLEKEVTAEEVNQAFENAGLEGIIEVEHQ
                     PLVSVDFNTNPNSAIIDAKSTMVMSGNKVKVIAWYDNEWGYSNRVVDVAEQIGALLTS
                     KETVSAS"
     gene            complement(28041..28664)
                     /locus_tag="O7798_000616"
     CDS             complement(28041..28664)
                     /locus_tag="O7798_000616"
                     /EC_number="2.7.1.24"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500299.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dephospho-CoA kinase"
                     /protein_id="HDC2862890.1"
                     /translation="MPKVIGLTGGIASGKSTVSELLSVFGFKVVDADKAAREAVKKGS
                     KGLAQVREVFGDEAIDENGEMNRRYMGDLVFNHPEKRLELNAIIHPIVRDIMEEEKQE
                     YLKQGYNVIMDIPLLFENELENTVDEVWVVYTSESIQMDRLMQRNNLSLEDAKARVYS
                     QISIDKKSRMADHVIDNLGDKLELKQNLERLLEEEGYIEKLNYGEED"
     gene            complement(28680..29552)
                     /gene="mutM"
                     /locus_tag="O7798_000617"
     CDS             complement(28680..29552)
                     /gene="mutM"
                     /locus_tag="O7798_000617"
                     /EC_number="3.2.2.23"
                     /EC_number="4.2.99.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500300.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional DNA-formamidopyrimidine
                     glycosylase/DNA-(apurinic or apyrimidinic site) lyase"
                     /protein_id="HDC2862891.1"
                     /translation="MPELPEVEHVKRGIEPYVINQKIEHVIFSDKVIEGKAQGKETII
                     KGIELDTFKTLSEGYTITNVERRSKYIVFQLDNKREQRTLISHLGMAGGFFIVDELED
                     IMIPNYRKHWHVIFELSNDKKLIYSDIRRFGEIRNVASVASYPSFLEIAPEPFSNEAL
                     TYYLNRIHQQSNKNKPIKQVILDHKVIAGCGNIYACEALFRAGVLPDKKVKDLTHQQQ
                     EMVFYYVREVLEEGIKYGGTSISDYRHADGKTGEMQLHLNVYKQPVCKVCGSQIETKI
                     IATRNSHYCPVCQK"
     gene            complement(29568..32198)
                     /gene="polA"
                     /locus_tag="O7798_000618"
     CDS             complement(29568..32198)
                     /gene="polA"
                     /locus_tag="O7798_000618"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500301.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase I"
                     /protein_id="HDC2862892.1"
                     /translation="MNKLVLIDGNSLSFRAFYALPLLSNKAGIHTNAVYGFAMLLEKI
                     LKEEKPNHFLVAFDAGKTTFRHEKYSEYKGGRQKTPPELSEQFPYIRQLLDAYHIKRY
                     ELDNYEADDIIGTLSKEADKAGFQTIIITGDRDLTQLATDNVTIYYTKKGVTDVDHYT
                     PDFIAEKYNGLTPNQIIDMKGLMGDTSDNIPGVAGVGEKTAIKLLNQFDTVEGVYEHL
                     DEISGKKLKEKLQNSKEDALMSKELATINVDSPIEVKLEDTLMTHQDEQQEKIELFKK
                     LEFKQLLADIDQSASVEDAIEKTFEIETSFDNIDFTSLKEAAIHFELDGGNYLRNNIL
                     KFSLFTGEKHIVINADDINNYVELVSWLENPNSKKVVYDAKKTYVASHRLGIDIQNIS
                     FDIMLASYIIDPSRTISDVQSVVSLYGQSFVKDDVSIYGKGKKFKVPEDDVLNPYVAS
                     ITDAIYFAKPNMDKQLEEYNQVELLADLELPLAKILSEMEEIGIFTDVHDLEEMEKEI
                     QEKLDVLIRNIHDAAGEDFNINSPKQLGVVLFETLQLPVIKKTKTGYSTAVDVLEQLQ
                     GEHPIIDYILEYRQLSKLQSTYVEGLQKVISDDQRIHTRFNQTLAQTGRLSSVDPNLQ
                     NIPVRLEEGRKIRKAFKPTSKDSVILSADYSQIELRVLAHITQDESMKEAFINGDDIH
                     TATAMKVFGVEADQVDSLMRRQAKAVNFGIVYGISDYGLSQSLGITRKKAKAFIDDYL
                     ASFPGVKQYMSDIVKDAKALGYVETLLHRRRYIPDITSRNFNLRGFAERTAMNTPIQG
                     SAADIIKLAMVKFAQKMKETTYQAKLLLQVHDELIFEVPKSEVDSFSEFVEEIMENAL
                     QLDVPLKVDSSYGATWYDAK"
     gene            complement(32492..33979)
                     /locus_tag="O7798_000619"
     CDS             complement(32492..33979)
                     /locus_tag="O7798_000619"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500302.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDC2862893.1"
                     /translation="MKTIQLHKTTLILIAILLFYTFMGILLPLMHDDLQWFSNYNTDI
                     LKVGFASLNGRYIGNIFEIIAVHVSWLRWLSYGLISMGIIWMIMHITRCKAWTSYYLL
                     AFSLMLILPSAIYADTYGWFAGFYNYATSTLISLFIIYYCINAIIYKEKQPVSVTVLF
                     YVLCFFGQLFMENVTLFHCIILILAFLYEFTANRTLNYKLLFSFMIATIGTIIMFSNP
                     NYRKILFEGSEYQQVSNNQGIFSKFAEMISTSLPYGVIFSQIIILSMIAALIIYLLLR
                     SDRYVHLTILKRRIIMIGFITLPLYYLLFYNQFLLNKNTDIGLVGFVNVIVCGYFAFS
                     IFVGIYLSINDRKTQITLYSLLIAICVSASTLVIVTPIEPGNFLIVYTIHVIILIILL
                     KEFRKYKSINVNFIKGASLVLAVIYLSAFIYVHYEHEKRVQLLKQQIKDHPRQEVYTV
                     ESLPFEHYMHHPSPINKNYQEWFNNYEELPKMTKVKYIPFGSDDS"
BASE COUNT        10748 a         6523 c         4641 g        12354 t
ORIGIN      
        1 actgctcggc aaaattaata atggcaagaa attgaacctt ataaacacat acgatttaga
       61 gcataaaaaa taaccatgaa gctctaccta ttgattaaat agattcttca tggctatttt
      121 agttttagtt ttataatgct tcaaagtcta attttgattt aacttcactt atgaaataca
      181 gactaccggt aattactaat gtatcacctt gataattttt tataaattca acgtagtcat
      241 ctactaattg tatttcatca ttttcaatac tacctacaat ttcttctttg cgtaacgctt
      301 tcggaaaatc aaattcagtt gcataaaacg tatgcgcaat taaacttaaa tgtttgacca
      361 tctcgttaat cggttttccg tttattgctg agaacaaaat atctactttt tctttatcat
      421 ggtactgttt aattgtatca attagagcat ctatactctc tgaattatgt gcgccatcca
      481 aaatgattaa aggtttgtca tgcacctgct caatacgtcc agtccaacga actgattcaa
      541 taccgtctat catcttattg aaatctaatt caattaatcc ttgttcattt aattcaataa
      601 gagctgttat ggctaatgca gcattttgtt tctgatgttc acctaacatg cttaaaatga
      661 ttgtttctaa ttcataatct ttataacggt aagtaaattc atcattttgc gatacaacaa
      721 caatttctct atctaattca attggctttg catgttgttc aattgcgcgt tcacgaacat
      781 attttaatgc atcttcattt ttaacagcat atatcactgg aacgttaggc tttataatcg
      841 cgcctttatc cctagcaata tctagataag taccacctaa aatatctgta tggtctagac
      901 cgatactagt taagattgat aaaaccggtg taaagacatt tgtcgaatcg ttctttatac
      961 ccaatccagc ctcaacaatg acaaaatcaa caggatgtat ttcaccaaaa tataaaaaca
     1021 tcatcgctgt gattatttcg aattcagttg caacacctaa atctgtttca cgttccatca
     1081 tttcacttac tggtttaata cgtgatacta attctacaat agcgtcattt gatattggca
     1141 caccatttag actaattcgt tcattaaatg tttcaataaa cggcgacgta aatgtaccta
     1201 cttcataacc attttcaact aaagctgttc taaggtaagc aactgtagag cctttaccat
     1261 ttgtgccacc tacatgaata cccttaatgt tattttgagg attattaaat tgtgctagca
     1321 tccattccat acgtttaaca cctggtttga tgccaaattt agttctttcg tgtatccaat
     1381 acaagctctc taggtaattc attgttacta actcctatgc ttttaattgt tcaattcttg
     1441 ccttcacacc atcatatttt tcttgataat cttgtttttt acgtttttct tcatttataa
     1501 ccttttcagg tgctttactt acaaagtttt cattagagag ctttttatct actctatcta
     1561 attcgctttg aagtttagct aattcttttt ccaaacggct gatttcctta tccatatcaa
     1621 ttagcccttc taatggtaat accactttac ctgcaattac aactgatgtc attgctttct
     1681 caggaatttc cacgtcagtg ctaatattta aggtactagg attacagaat ttgattaaat
     1741 aatctttgtt ttgtgataaa gttgtttcaa tttctttatc tttagcttga attaaaatag
     1801 gtatttcttt agacaatggc gtatttactt ctacacgtga ttgtcttaca gatttaatga
     1861 tttcaacaag ttgttgcatt gtttgtttac tttcttcaaa aatcaatgat tcacgcactt
     1921 ctggccatga agctttaaca attgtgtcac cttcatgtgg taaactttgc catattttct
     1981 ctgttacaaa tggcatgaat ggatgtagca ttctcataat attgtctaaa gtataactca
     2041 atactgaacg tgtaacttgt ttttgttctt catcattact attcattgga attttactca
     2101 tttcaatgta ccaatcacag aaatcatccc aaatgaaatt atataatgca cgtccaactt
     2161 cgccgaattc atatttgtca cttaaatcag taactgttgc aatcgtttca tttaaacgtg
     2221 ttagaatcca tttatctgct aatgataagt taccacttaa atcgatatct tcaactttaa
     2281 agtcttcacc gatattcatt aaactgaaac gtgccccatt ccagatttta ttgataaagt
     2341 tccacactga ctcaactttt tcagttgagt atcttaaatc atgtcctgga gatgaacctg
     2401 ttgctaagaa gtaacgcaag ctatcagcac cgtattcgtc aataacatcc attggatcca
     2461 caccattacc taatgattta ctcatcttac gcccgtcttc agcacgaact aaaccgtgta
     2521 ataatacatc attaaatgga cgacgatctg taaattctaa gccttggaat atcatgcgtg
     2581 ctacccagaa aaagataata tcgtaacctg taactaaggc atttgttggg tagtatcgtt
     2641 taaagtcttc actttctaaa tcaggccaac ctaacgtaga gaaaggccat aaagcacttg
     2701 agaaccacgt atctaataca tcttcatctt gttgccaatt ttcaatatca gttggcgctt
     2761 cttctccaac atatatttcg cctgtttctt tatgatacca agccggaatt tgatgacccc
     2821 accataattg tcttgaaatc gtccaatctc taatattttc catccattgg ttaaatgtat
     2881 gttcgaaacg ttgcggataa aaatcaatac gatcatctgt tttttggtta tctaatgaac
     2941 gtttcgctaa gtcttccatg cgcacaaacc attgtgttga taaatatggt tcaacaacag
     3001 cgccagatcg ttctgaatga cctacagaat gaacatgatc ttcaatcttg ataactaaat
     3061 cttgttcttt taaatcttta actagctgtt tacgacaatc aaaacggtcc ataccttcat
     3121 atttacccgc tttgtcgttc attttaccat tttcatccat aacgataata ttttctaatt
     3181 gatgtctttg accaatttca aaatcattag ggtcatgtgc tggtgtcact ttcatagcac
     3241 cagaaccgaa gtctatatca acatactcat ctgctaaaat aggcagttcg cgtcctacga
     3301 ttggtaatat aacagtttta ccgattacat ctttgtatcg ttcgtcatta gggttaacaa
     3361 caatcgctgt atcacctaac atcgtttctg gtcttgttgt tgcaatttca ataaaacctt
     3421 caccatcagc gtaaggatat ttaaaatgat aaaacgcacc ttgaacatct tcatgtatta
     3481 cttcaatatc agataaagct gtacgtgctt taggatccca atttataata cgttcgccac
     3541 gataaataat tcctttattg tataaatcaa caaaaacttt tttaactgct ttacttaaac
     3601 cttcatctaa agtaaaacgt tctctactat aatctaaacc tagacctaat ttagcccatt
     3661 gcgcacgaat aaatgacgca tactcttctt tccaatccca tgcctgttct aaaaactttt
     3721 cacgaccaag atcatatcta gttattcctt gttcatttaa tttagcttct acctttgcct
     3781 gtgtcgcaat accagcatga tccatacctg gtaagtataa cgtatcgtat ccttgcatac
     3841 gtttcatacg tgtaatgata tcttgtaaag tcgtatccca tgcatgtcct aaatgtaatt
     3901 taccagttac atttggtggc gggataacaa ttgtatatgt ttcttttgat ttatcttctg
     3961 acggtttaaa ataaccattc tttacccatt cttcataacg tcccgcttca acttcacgag
     4021 gatcatattt tggtttcatt tccatttgct atacctccta aaaaaataaa aatatccatc
     4081 ctatatacaa ataggacgga tattccgtgg taccacctat attcaagaag gatgattaat
     4141 atcaaattca ctcttttaac ataattggaa taatcatacc aatactatca tcgtgaaatt
     4201 tgaaatgctt catctcttca agcactctag attatgatta acgctcaaac acgtcttagc
     4261 ctactattaa tcacgttcag ctaagatact ctgtgggcta ccttcagtaa aaatcattta
     4321 catactcaca ccaaatcata tgctctcttt aaaataattt gaacttactc ttcccaaatc
     4381 ctatattaaa ctcttaactt atagtataat gattgacaaa ataagtcaat gtataggtgg
     4441 gaataaaatg aatgaatgcg catttggtac taaagatcca gtctacttag actatcatga
     4501 tcatgtatgg ggacaaccgc tctatgatag caaggcattg tttaaacttt tagcattaga
     4561 atcacaacat gctgggctat cttggttaac tattttaaaa aagaaagaag cctatgaaga
     4621 agcattttat gatttcgaac cagaaaaggt agcacaaatg accgctcaag atatcgaccg
     4681 cttaatgact tttccaaata tcgttcatca tcgtaaaaaa ttagaagcaa ttgttaatca
     4741 agctcaaggg tatttaaaaa ttgaacaagc atatggtagt tttagtaaat ttttatggtc
     4801 atatgtaaat ggtaagccta aagatttgca gtatgaacat gcttctgatc gtatcacagt
     4861 tgatgatact gcaacacaac tatctaaaga tttaaaacaa tacgggttta aatttttagg
     4921 tccagtaaca gtattttcgt ttttagaagc agccggttta tatgatgcac atttacaaga
     4981 ttgtccatca aagcctaaac ataattaatt tgctatagca tcataaagta aacgagacat
     5041 catctatttt taactaatag actgtctcgt tttttaatgt gaaaatttat tcaaatcata
     5101 agttaaagtt ccaagttaat gctctgctaa tattagatat cttaatctaa aaatagatgt
     5161 acaacctttg cttaaacctt aataatgaat tctatcctaa gcataattca acttagatgg
     5221 atgatagttt ctaatcttca cgcttattcg aacgatattt taaaaagtaa ttaattcctg
     5281 gtgcaataat aaataggatg aaaaagattc ggaaaatatg ataactcgta atcatagcaa
     5341 catcggcacc agtagctaat gcaactaaaa ctatctgatt aacccctcct ggtgctgcac
     5401 caagaaacaa ttcattaata ggattattat caaagaaatg tatgatataa accatgatta
     5461 gcgcaccaat tatcaacata atattttgaa ttgtaattgc gattgctagt ctacctttta
     5521 aatctgacaa taaatgcgca atttgaactc caattctaat catatatatt agttgtgcca
     5581 tgttcaacaa ccaatgatct agtgtaaatg ttaaacctgt agaaaaattc caaacaatta
     5641 atacaatgag tggtgctaat aattgaaatg ttggaaactt tattttagac ataattagat
     5701 aaactataaa gatagctatc gctaaaataa ctatttgccc tatgtttaat acttgtgata
     5761 aaggcaagac ttttgttaac tttccattcg catgcatgtt accatcatga aaaaaatatg
     5821 aaatgaacgg tactaaaaca acaacaaata taattcgtga tgtttgcgtt aagctaacaa
     5881 ctaacaaatt agcacgtttg tcttgttcag ccatgaccag catttgtgtt agtgctcctg
     5941 gtataacact taaaatagct gtttctgtat taatacgtgc aattttttta aaaacaaatg
     6001 ccattactat tgcaattaat aatatcgaaa tagatacaac aataatcgaa agccaattgt
     6061 ttttaatatc cataacgaca tttttcgtaa acgttgatcc gatttgcaca cctaatagta
     6121 caatacctaa ttcactaagt aagaatggcc atttaatatc aagtttgaaa acttttacac
     6181 aaatgattga tgcgataata ggaccaaaca taaatggaag taatacgtgc gatgaataca
     6241 gtagaatact aataaaaaat gataaaacga acacaatgaa attatttcta tatatcattg
     6301 ccatgttttc cacttctttc aataaaaaat aaaatgacta aattgctgct tgagcttcac
     6361 gtttgttaag ataacaatat ccgctagcag ttttgactac aaagcatata tggactttca
     6421 ctatcaagtc gccgcccatg ccttatatac atttaaaaag agcctgaaca aagttcaggc
     6481 tctcaatttg tccgtatatt tattttacaa tacgacttaa agccgtatca aatgcttgaa
     6541 tcgttttttc aatatcttct ttcgtgtgtg ccgtagataa gaatgtacct tcaaattgag
     6601 atggtggtaa aaacacacct tcttttgcca tttctcgata catttctgca aataatttca
     6661 aatcactttt attcgcttgt tcaaaattag ttacaggtcc ttcatttaag aaataaccaa
     6721 tcattgaacc tgctctattt acagttattg gtacattgtg tttagcaaat acacgtttta
     6781 aaccgtcttc aagtatatcg cctaacatat taaaatactc atatgtctct ggcgttaatt
     6841 ggcttaacgt ttcataacca cttgtcattg caagaggatt tcctgataac gtacccgctt
     6901 gataaatatt tcctaatggt gctatatgat ccatgatttc ttttttacca ccaaatgcac
     6961 ctacaggtag tcctccaccg ataacttttc ctaagcaagt taaatctggt gtcacaccaa
     7021 agtaaccttg tgcacaatga taaccgactc tgaaaccagt cattacttca tcgaaaatta
     7081 gcaatgcgcc gtattcagtc gtaatatctc ttaatccctg taaaaaacct tcaatcggcg
     7141 gtacgacacc catattacca gcaacaggtt ctacgattac accagcaata tcgtttccaa
     7201 atttttcgaa agcgatttta agtgcatcta aatcattgta tggaactgta attgtatttt
     7261 tagcaatacc ttcaggcaca ccaggagaat ccggcaatcc taatgttgcc accccagaac
     7321 cagctttgat taataacgaa tcactatgac catgatagca accttcaaat ttcacaattt
     7381 tatttctgcc agtataacca cgtgctaatc ttaaagtatc caatgtagct tctgtaccag
     7441 atgacaccat acgcactttt tctattgaag gtactcggtc aataacgagc tgcgccaatt
     7501 tattttcaag taatgttgat gcaccaaaac ttgtaccttt atcaattgct tcatgtaaat
     7561 gactaataac ttgagggtct ctatgtccta aaataagtgg tccccaactt agtacatagt
     7621 cgatatactc gttaccatcg atatcataaa tttttgaacc tttaccgtga tccataaaaa
     7681 ttgctggtgt atctactgat ttaaatgcgc gtactggact atttacacca ccaggcatta
     7741 aagtttcagc aaccttcatt gcttcttctg atttcgtata tctcataaag taaattcctc
     7801 ctacagttta tggaaaatca taaatataaa accttattta tctaaatagc gacaaatgtc
     7861 ctttgcaaaa tacgtaataa tcatatcagc acctgcacgt ttcattgaaa ccatttgttc
     7921 cataacgaca cgttcttcat ctatccaacc attttgtgcc gctgctttag tcatactata
     7981 ttctccactc acattatatg caacaactgg aacattcgta tgatttttaa catctcgaac
     8041 tatatctaaa taacttagag caggtttaac aatcatcatg tcgcaccctt ctttaagatc
     8101 actttctaat tcacgaagtg cttccaaacg gttagcaggg tccatctgat acgtttttct
     8161 atccccaaat gatggcgctg aatctgctgc atctctaaaa ggtccaaaga aacttgatgc
     8221 atacttgaca ccataactca ttataggaat attgtaatag ccggcttcat ctaatccacg
     8281 acgaatttca gcaacaaaac catccatcat attacttggc gcaataatat cagcaccagc
     8341 ttccacttga gaaattgctg ttttaacaag tagtggcaat gatttatcat tgtcaacgtc
     8401 atgtgtatgg tcatcaatca cgccacaatg accatgatca gtatattcac ataaacaagt
     8461 gtctgcaaca attaataagt catcatacat ttttttagca atacgtgttg cctgttgaat
     8521 aacaccatcg tgaatgtatg caccagtacc tatatcatct tttgagtttg gaacaccgaa
     8581 aaacataatg gcacgtatgc ctaagtcata agcttctttt aattcacttt caagtaaatt
     8641 caaactgatt tggtatacac ctggcaatga cttaatttct tttttcacat cgtctttttc
     8701 aactacaaaa attggatata ttaaatcttc ttttcttaca tgattctctc taaccatatc
     8761 tctcattgtc gctgatgatc tcaatcttct atgtctatca aatttcattt ttagccccta
     8821 ctttctaaaa tcttttcaat tagtgattcg agtgtttgaa tttctgcaat tgttactggt
     8881 tgttgatatg atttaatggt ccgtgctgtt tgttctccaa tagcaaaata cgacttgaat
     8941 tttggtacaa atccttcatt aaaataataa cgtactgccg acgaacttga aaatgttaat
     9001 gcatcgattt gttgatgttc tatcatttct ttaacatctt gtatattttg tttgttaggc
     9061 actgaagtat ataaatctat tttaacaact tcattatctt tagataacgc tgctaataac
     9121 aatggtctcg ccaattcact cgaaggcaaa agtatttttt ggttagtttg attaaatgat
     9181 tttaaaaatc cttcttgaga aaagtcgttt ggcataaaat caactcgaat gccaagtgat
     9241 tcacaatatt gcgctgtctt acttcctatc acagcaatgt tatcaacatt aattcctttt
     9301 agatatttat aaaagaattt cacagcattt ttagatgaaa aaataagcca gtcatagcgt
     9361 tgatttaaca aatgaatatc aaaatttagt ggctttatat caataaaggg tttgtgaata
     9421 attgatacta aatcactttg catgtcattt gtttgtgtca taactacaac tggcttcata
     9481 tttaaacgtc actccattat ttaatgttgt tcatttaagc gttttataat ttcataagca
     9541 ccttgctctt ttaatttgtt actcactgtt ttgcctaact caaccggatc tgttccgttc
     9601 attgtatatt caaatcgttc tttaccatct ggggtcataa ttaaacctgt aaattcgatt
     9661 tcgttttgat ctgagattgt agcatatcct gcaattggca cctgacaact accatccatt
     9721 tctgctaaaa acgttcgttc agcagtcaca cattttgcaa cctcatcatt atgtactttg
     9781 cttaataatg ttaatagttc ttcatcgtca ctacgacatt ctatccctaa agcaccttgt
     9841 ccgattgcag gtaacaatgt atctctatca agataagatg ttacaatatc atctgaccag
     9901 cccattcttc ttaaaccagc tgcagctaaa ataatcgcat cataatcttc agtttgtaac
     9961 ttttctaatc gtgtatctat attacctcta atccatttaa tctctaaatt aggatactta
    10021 gataatattt gtgcaccacg acgtaatgaa ctagtaccaa taatactgcc ttctggcaat
    10081 tgggatagtg gtgtatgtgt tttagaaata tacgcatcaa aaggtaattc tctatcaggg
    10141 atacaaccta atgttaaacc ttccggaatt acacttggta cgtctttaag cgagtgtatt
    10201 gccatatcga tatttttttc aaaaagttca tgttgtattt ctttaacaaa taagcctttg
    10261 cctccgactt tagacaattg tttatctact atacgatcgc ctttcgtgac aatttcttta
    10321 atttcaattt ctagatttgg ctcgacagct tttaatttat caataaattg ctggctttgt
    10381 gttaaagcta atttacttct tctggagcca acgactaatt tacgcatgtt caattcctcc
    10441 taggaacgga ttgctctaga ttattttctc aattcacaaa atgtgttgca aaaaataaat
    10501 taatcatatt taagcaaaat aaaataatgt tatagtatat taaatatctt gaattcaacc
    10561 atttgttgat tctaagtaaa atataacttc catataatac tgtaataatt gaagagagta
    10621 ttaccttcgg gtcaatgaat atacgttcac caactgaaat tacaccccac tgtgtaccta
    10681 aaataatact aaatatgaga attatccacc cacttaacgt tgagtaaaac acaattgatt
    10741 caagtgtagc aacgctacca attctaaagt atttttgatc aaaacgtttt tccttcaaat
    10801 tacggtattg catgatatac agtaatgcat tgacaaaagc taaggcaaag aagacataac
    10861 ttaacacagc tagaccgata tggactaaca gtaactcgtc tacaacagca attttctgaa
    10921 ccttattagt ataatgtgtc ggttgaaatg tattcatccc taaaagtgtt aaccctatta
    10981 aattcaagaa aaacacagag aaattcaaaa ctttgataag gttaagaatt aaagagattg
    11041 aaataatcag ccaacttaaa gtatagaata catctgaaat agaccctaat ggaatatgtc
    11101 tagtttgtat aataaaaata gataaagaga ttgtttgtaa aacccaaaca atccccaata
    11161 aatatatgcc taaacttcta atcttatgac ttttttgtac aaaatcataa aaatagcaaa
    11221 tgatactgat taagtatatt aataatataa tttcattgaa tcgaataaac aggttttctt
    11281 gcatattatc accatattaa tatgcttatt caaaactaaa gatacgtcgc gctgaaattt
    11341 ccttgacctt gctttctttt tgttgcttcg cttgctcatg aggacattca gcttcgatat
    11401 caaatatatt ttgaaatagc tctaattttt cattactttt cttatcacta cttaattctt
    11461 tggcctgttt aataggatct ttcaacattt gattgatgat actttttgta tgtttagata
    11521 taattttacg ttctctttcg cttaaccctg gcaatttacg atcaatactg tccatcgttt
    11581 ctgcttgaat tgccatagct ttttcacgta aagctctaat cactggaaca acacccaaca
    11641 tactaatcca ctcattgtgt gcatgtattt ctgcaggaat ttgttccgaa attgttgcag
    11701 ccgctaattg tcgctcacgt aagtttgcat caactaaacc ttttaagtca tcaacatcat
    11761 aattaaagat gtttgtgatg gcactaatac caggttcaat atctcgagga actgcaatat
    11821 caatcaatac tagtgaatct tgctttctat tttctgcaat tctttctatc atttcatttg
    11881 taatgatata agattgtgca ctcgttgaac taatcacaat atctgcactt tcaagtaaat
    11941 ttggtaatga tgatagttca tcatatttca cttgatgctt tgctgctaat ttcatagcat
    12001 tttcaattgt tctatttact actgtaatat cagtaattcc agaaccaaga agatttaata
    12061 gtgataattc actcatttcc cctgcaccaa taatgatagc ttgcttactt ttcaatttgc
    12121 caaatacttt tttcgccaac tcgaccgcag cataagacac acttacagca ttatcagcta
    12181 tatctgtttc attatgtgct ctttttgcaa aagtaattgc ctgtttaaat agatgattaa
    12241 aaattgttcc tgtcgtacct gtgctttgcg ctaagaaaaa tgcatctctt atttgaccta
    12301 aaatttgagt ttctccaagt acgattgaat ctaaaccaga agtgacacgc aataaatgtt
    12361 ctactgcttc gtcccccact tttacttctg acattgcttt aatatcatct acttcaaatc
    12421 caaatgcacg agctagaaat cgttgaatat agtaacgacc tgtgtgaatt tgatcaacaa
    12481 cagcatatac ttcagttcga ttacatgttg ataatatgac attttctaaa atagatttag
    12541 tttcatataa atcttcatgg gcaattcgta aggcatcatc tctaaaagca acttgctctc
    12601 ttagtgcaac atcagctgtg cgatgattta tactaattgc aataaaatgc atttgaaacg
    12661 cccccatata tactaacaat acaaatatta taacataatt taaaatccaa ttaagtacga
    12721 tgcttaaata aattataatc tttctaattt acttttgagt ttttgacaaa atgatgaacg
    12781 ttgaaaaatg ttatcaattg tgtactaatt aaaagtttcg tgcttacatt atttttaaaa
    12841 tttttgtata agttttgacg tacaaaaact atgaaatata cggttcaatt aaattccata
    12901 tttgttgttg tttattattt tgaattgatg aataacttac aattgtatcg tctgggtcca
    12961 tatctaattg tgtcttaata tttttaatat gcttttgaac cttacctttt ggaattttgt
    13021 cttctttagt gcatataact aaagtaggaa tatcaaaatg tttcaaataa ttgtacatta
    13081 agatatcatc ttgtgttgga tcatgtctta aatcaactaa ttgaataact aattgcaaat
    13141 tctctctctt agttatatat tcctcaatca ttttcccaaa tttttcacgt tgtgttttac
    13201 ttactttagc atatccatac cctggaacat ccacaaaaat aagttgttca tctatattat
    13261 aaaaatttaa cgtttgcgtt ttgccgggtt gctgtgatgt acgtgccata ttttttctgc
    13321 caatcatact attgataaat gtagacttac ctacattaga tcgaccgctc agtgcaactt
    13381 cagacaattc tgtttctgga tattgttctt cttttactgc actaatgatt aattctatat
    13441 tattaggatt aactttcatt ttatatcctc acttttttat attctctttc aattctacca
    13501 ttatataata tttgaacctt tcggtataca ttataaaaaa gctccgatca aagttaaact
    13561 atttgagcgt caactttgat tggagctttt cacttttata acacatcaat gattaagctg
    13621 atgttttact attattaatt aaattgcctt ctgcgtcgta tagttctggt tcagtttctt
    13681 cattaattgt ttgtgctgta ataactacct tcgttacatt ttcgttagaa ggcacatcaa
    13741 acataatatc gattaacgat tcttctatga ttgaacgtaa accacgcgca cctgtttttc
    13801 tttcaattgc tttttcacta attgctgata aagcttcttc agtgaactct aaatccacat
    13861 catctaattc cagcatttta gtatattgtt tcacaagtgc atttttaggt tgcgttaaga
    13921 tgtttttcaa cgcagttaca tctaatgttt ctaaattagc tacaattggc acacgtccga
    13981 taaattcagg aatcaaacca taggcttgca aatcttctgg gcgaatttgt gctaataatg
    14041 cttgttcgtc atatttatca gcttcattgc ttgagaaacc aataactttt tcaccaagac
    14101 ggcgcttaat cacttcttca ataccatcaa aggcaccacc aagaataaat aagatatttg
    14161 ttgtatcaat ttgaatcatt tcttggtttg gatgtttgcg tccaccttgt ggcggaacac
    14221 ttgcagtcgt accttctaag attttaagca atgcttgttg aacaccttca cctgaaacgt
    14281 cacgtgttat agatgtgttt tcagatttac gtgcaatttt atcaatttca tctacataaa
    14341 taataccttt ttcggcttta tcaatgtcaa agtcagctgc ttgaattaat ctcaacaaga
    14401 tattttcaac atcatcgcct acataaccag cttcagttaa acttgtcgca tctgcaattg
    14461 caaatggtac attcaacgtc ttggctaagg tttgagctaa taatgtttta ccactacctg
    14521 ttggcccaat taatgcaatg ttactttttt gtaattcaac atcatcttct tttggtccta
    14581 attgttgaat acgcttatag tggttataaa cagctacagc taaagatttt ttagcttttt
    14641 cttgaccaat aacatattcg tttaaatgat ccataatttc tttaggagta ggtaattctg
    14701 tcatcgcttc agaagtgttt tgagctaatt cttcttcgac gatttctgag cataattcaa
    14761 tacactcatt acaaatatat acaccacttc ctgctacaag tttttttact tgatcttggt
    14821 cttttccgca gaaagagcat ttcaaatttt cttcatcttc attgaattta aacattcttt
    14881 ttacacccct attcgttaaa gactatacta gattggatgt tacaatgcaa catattaaca
    14941 tacaaacttt ttgcttaaag aatagtagca gatacataag ctatgcatct gctactcatt
    15001 tttgtaattt aatatttaat gaagattaat cttctttagt tccttcaacg aactttgcgt
    15061 tatctcttaa taaatcgata actttttgga tacgaacatc atttttaatg atatcagtat
    15121 tacctaaagt atttttgata tcttcaactg agatattaaa ttgtttactc attttttcta
    15181 attctttatc gatatcttca tcagtagctt cgattttttc agcttcagcg atcgcagtta
    15241 aagttaagtt agttttaaca cgttgttctg catcgtcttt catttgctct cttaattgag
    15301 tttcatcttg acctgagatt tggaagtacg tttgtaaatc taaaccttgt tgttgaattc
    15361 tttgtgcaaa ttcagacacc atacgatcta attcagtatt aaccattgct tcaggaatat
    15421 cgattgttgt attatcagta gcttttgtaa tcgcttcttc tttttcaaca ttttcagcat
    15481 ctgtagcttt ttgttcagct aaacgtttac gtaagttttc tttgtactcg tctactgtat
    15541 ttgcttctgc atctaattca ttagcaattt catctgttaa ttctgggact tctttaaatt
    15601 taatttcgtt aacttttgtt ttgaaagttg cttctttacc ggctaattct tcagcatggt
    15661 attcttctgg gaatgttacg acaacatctt tttcttcgtc aactttcata ccttctaatt
    15721 gctcttcgaa accaggtatg aatgaacctg aaccgatttc taaatcgtaa ccttcagctt
    15781 gtccaccttc gaattcttct ccgtcaactg aaccactaaa gtcgatgtta actgtgtcgc
    15841 cattttcaac aacaccatct tctttaacga ccatttcagc taaatgtcct aagctgtggt
    15901 caatcgcttc ttgtaactca tcatcagata attcagtttc ttgtttttca atttcaagac
    15961 ctttatagtc tcctaattta acttctggct caactgtaac tgttgcttca aaaatgaaat
    16021 ctttaccttt ttcaatttga gtaacactta cttctggttg tgcaactggt ttaatatcag
    16081 tttcgtcaat tgcttcacca taagcatctg gtaataaaat gtcgatagca tcttgatata
    16141 atgcttctac accaaagcgt tgttcaaaaa ttggacgtgg cactttacct ttacggaatc
    16201 caggtacgtt aatttgttta accacttttt tgaatgcttg atctaacgct ttgtttactt
    16261 tttctgcagg aacagtaaca gttaataaac cttcgttacc ttcctttttt tcccaagttg
    16321 ctgtcatgta tatatacctc catgattaac taatttattt tttcaacttc cctattatat
    16381 cataggtcta ttccctatac aaacattgaa atcacaacgt ttatatattt gtaaatcaac
    16441 ttttttcgtc aaaactatat taaaatgctg agtattattt tgcaacaatt taactattat
    16501 tattcaaatc taattgctga ataaaattaa atgcatcgat actttgtaat tcacatttaa
    16561 gtcctaacat atttttgaaa taacattcgt atgcattaat ccatttattc gtttcaaaca
    16621 aagtttcaat atcaattgga taaatcatga tagagtgatt attcataata tggtgtgctt
    16681 cttcagcgat atgtaaagca ccatcattta atgtttccat aacgttaggt ataacttttt
    16741 ctttaagtgt tgtatgttct agccctttta aattagctgg tacaaaagtt acatccatac
    16801 catacttttc aattgtcagt tcttgtgtac aatttgcgaa ccttaaatac tcaatcatta
    16861 aactaatgag gttataactg tacgtattag attttaatat atataatacc gtttcttgaa
    16921 attgaaaatg accattgtct attaacttca aaatcaagtg cgtctgttcc ctcattgata
    16981 acgtatcaaa atcagctaat gactgagtca atcgtttttc atcttcaatt aattttgact
    17041 tagcaaattc tttaagagga tgtaatgcca ttcttgtttt gtgatctttg acttcatcaa
    17101 taatttgatg aattacttct accgcttcaa aatattgtcc caaaccaatc aaacttttca
    17161 cgtaataaat catcaatgca tcatattgtt gtatgccagt tttcaataag acaattgttt
    17221 cttctcttaa ttcaagaaat gaccccgtct catataacat acggcatttc atcattgcta
    17281 tttcttcagt gagttcaaat tgacgttcat attgcacaat atattcatac atcaggtcat
    17341 agttttggtc ttgttcagca cgttttatat ctttatataa ctttttcgaa gagttaggaa
    17401 actgaataat atctgacata tatgtcacct cgtttgatta taaatcttga aggattaatg
    17461 cactccacgt ttcgaaatca tcatatgact ctatgttgcc tttttcaacc cattttattc
    17521 gtaaagtatc tgtttcttta gcttctacat cattcgtact tacagtgatt ttaaatacaa
    17581 caccaatatg taccttgccc acttcattat tatcgtcatt aataaaaccg atatattcca
    17641 tattttgtga atcttgctca cttaaaccta cttcttcttc taattctctc tgtgcattaa
    17701 ctctcaatac ttcgttaata gattctgttc ctggaacatc attcatatga ccgcctacac
    17761 ctattgaaga ttgtccatgc aatcgagctt ctccaccgcc agataatcgt tcatacacta
    17821 atatctcgcc atgctcattt tcaagtaaac aataagaaat gagttgttta tatgatggat
    17881 cctcttccat atcgccgcgt cgcttaactt catattgact tagcgcatca aaaatatttt
    17941 gaccttctgg tttattctta tttaaaaacc cattgaaagt attcttttca ttattaaaaa
    18001 taatttctct aggtactaca atgatttgtt catcaaattt agacatcgta taaaactcct
    18061 cactttaatg tttgttctct taaatgcatt ttagcaaata tgtcatattt tagcgattaa
    18121 atgtggcatt ttgctattta aaaaataaaa aagagatgac aatgccatct cttttttata
    18181 agtgttatta ttttaaagca tctttagctt tagttactaa ttgagcaaat gctttttcgt
    18241 cagaaattgc gatttctgat aacattttac ggttaatgtc gataccagct tttttcaaac
    18301 cgttcattaa acgtgagtag ctcatttcat gttgacgagc tgctgcgttg atacgtgtaa
    18361 tccataattt acggaagtca cgtttacgtt gacgacggtc acggaaagca tattgacctg
    18421 atttcattac ttgttgctta gctactttgt ataatgtatg ttttgaaccg aagtaacctt
    18481 tagctaattt aatcgttttt ttacgacgcg ctcttgttac tgttccacct ttaactcgtg
    18541 gcataaaaaa ttcctcctta ggtaattcct accgatttct gtatttgttc ttattttttg
    18601 tatgctaata attgttttac acgtttcata tcgctcttag acactaatct agctttacgt
    18661 aattgacgtt tttgtttagt gctcttgttt gcgaataagt gagatgtgaa agctcttgaa
    18721 cgttttaatt gacctgaagc agttctttta acacgtttag ctgctccgcg gtgagttttc
    18781 atttttggca taatataagt cctcctgtaa tagctttaat tatttttcag ctgttggcgc
    18841 taacatgata aacatttgac gcccgtccat tttaggtttt tgttcaactg ttgctatatc
    18901 tttgcattca tctgcatatt tttctagcac acgttgacca atttccttat gcgtaatggc
    18961 acgccctctg aaacgaatag atactttaca tttatcgcct ttagttaaga atttacgtcc
    19021 gtttttcaac ttcgtttgga aatcatgttc ctcaattgtt ggacttaaac gaatttcttt
    19081 aacattgata attttttgtt tctttttcat ttctttttct tttttctgtt gttcgaattt
    19141 gaatttaccg taatccataa ttcttgcaac tggtggtttc gcattcggtg caacgaccac
    19201 taagtctaaa tctacacgtt cagccatttc taaagcttca cgctttgatt taacaccaat
    19261 ttgttcacca tcttgaccga ttaaacgtaa ttcttttgca cgaattttgt cattgatttg
    19321 agtttgatct tttgctatgg ttgacacctc caaaattttt acgaaatttg caccaagcaa
    19381 aaaggaagag caggtataaa atacccgctc ttccttatac acagttatgt gtaatgtgat
    19441 taacctgcca actgctttat gcgtcgctac aggtgagaag cgggtgcttc tacttggttc
    19501 gtttcgtatt caacgttatt aatcatatca acaattcaca tttaagtcaa cactataact
    19561 gtaattattt ttattttaac cttttatttc atccattgac acgtcttgac gtaaatctac
    19621 ttgttctaat ggaatttttt tcgttttata tcgaagctta tgataaataa agaatgctaa
    19681 aaatactgga attcccatat acgtaattaa gaagcgacta aaattaaaat ctcctgtttt
    19741 aataaagtca acatcttgac caataattac tacaatacat aaaaagccag caaataatgg
    19801 tccgaatggg aataatttag cagtatattt taatttagat ttgtcataat tttgtttatc
    19861 aaatgctctt ctaaatcgat aatgacttac tgctatacct acccaagcaa taaaaccagt
    19921 taaaccactt gctgcaacga tatattcgta tgcacctttt gtaaggcttt gtaatacgaa
    19981 aattatcact acaatgattg ctgtaacgag taacgacata tatggcacac cgtttttatt
    20041 tgttttacca aatgcttcaa acgctaattt atctttactc attgaatata gcattcgagt
    20101 tgaagcatac atacctgagt tacctgctga taacacagac gttaaaatga ctgcattcat
    20161 aaatgatgct gcaaacgcaa atccagcatt tttaaacact aatgtgaatg gagacgttgc
    20221 tacattatca ctacccccca ttaatgcact actatcataa ggaattaaca taccgataac
    20281 aaaaatggct aaaatgtaaa ataataaaat tctccagaat acttgtttaa ttgctttcgg
    20341 cacagcacgt tcaggatttt ctgattcacc agccgtaata ccaattaact cagtaccttg
    20401 gaatgagaaa ccagcgatta agaatacacc tagaattgat aacaaacttc ctcctaagtt
    20461 gccaccaaga attggacctt cacctttatt aaatatttcg aatcctacaa catgaccacc
    20521 catgattccg acaatcgtta ataaaccaat tgcaatgaaa acaataactg taaccacttt
    20581 tatcaatgcc aaccagtatt cactttcacc atagacgcga actgataacg aattcagact
    20641 aaaaattata actaagaaca acgcactcca tgcccaagcg ggtatgcctt gcaatggtgt
    20701 ccaatattga atgacttgtg ctgcaatcgt aatatctgct gctacagtca ctacccagtt
    20761 aaaccaatag ttccaaccaa gcgcaaaccc taaagatgga tcaacaaatc ttgtagcata
    20821 tgtactaaat gaacctgata ctggcaaata cgtagccatt tcgccaagtg acgtcattaa
    20881 gaaaaatacc attattccga taattgcgta tcctattaat gcacccaaag cacctgcatc
    20941 atgaattgct ccaccagaag ttacaaataa acctgtacca atacaacccc caatcgcaat
    21001 catagaaata tgacgatctt taagtcccct tttgacaaca ttgttacttt cattttgaac
    21061 ttttgacata taagctccct ttccatgttt tagaggccaa gaaataaata acctttattc
    21121 actttcatac ccttttttac agaacatagt gatattaaaa gtaaaaaagt ggctacatac
    21181 ctttaagata tgcaaccact ttggcaatta tctatataag gtagcacatc acattctgtg
    21241 acagtacagt tcctattcga aaactgtccc aatagatata atttatggtt tatatctatt
    21301 tcggcatctt tacctttcac ttgttcaact tatgtaccat aaatacttct gacaagttac
    21361 taattaaaca tgcaacctct aactcaattt aatattttaa ctaacttgta atatacagga
    21421 ttcatcacgc ataatcaacc ctgtaaaact tgatacgcaa taaaagtttt aaagcatttt
    21481 attgcgacaa ctgtctatct atgttttttc aaacgaattt catcaactag attccagata
    21541 aattcatctt tttcaactgt ttcttggtct tgcgatccat attgacgcac attcacttga
    21601 ttattttcaa cttccttatc cccaactacg atttgataag gtattttttg catttgagct
    21661 tctctgattt tataacccat tttttcatta cggtcatcaa tacttacacg aacgccttga
    21721 gatttcaatt catcttgtaa ttggcgcgca taatcataat gtaaatcaac gttaactgga
    21781 atgatttgaa cttgttttgg cgctaaccaa gttgggaatg cacctttagt ttcttcagtt
    21841 aaaaatgcta caaatcgttc cattgttgat acaacaccac gatgaataac aactggacga
    21901 tgatgttcac catcttgacc aatataagtt aaatcaaaac gttctggtaa taagaaatca
    21961 agttgtgctg ttgataatgt ctcttcttta cccatcgctg ttttaacttg aacatctagt
    22021 ttcggaccat agaatgccgc ttcaccaatc gcttcttcgt acgataagcc aagctcatcc
    22081 gctgcctctt taagcatatt ttcagcttta ttccacatat catcatcatc aaagtacttt
    22141 tctttatctt cagggtctct ataacttaat ctaaagctat aatcctcgaa accaaagtct
    22201 ttatacacat caataatcat gtttacaacg cgtttgaatt cttctttaat ttgatcaggt
    22261 cgaacaaaga tatgtgaatc atttaaagtc ataccacgaa cacgttgtaa tcctgataca
    22321 gcaccacttg cttcatatct atgcatcgtt cctagctcag cgatacggat aggtaattca
    22381 cgatatgaat gtggtttatt cgcataaatc atcatatgat gtggacagtt cattggacgt
    22441 aataccatag attcagtttc atctaactgc attggtggga acatatcttc ttgatagtga
    22501 tcccagtgac cagatgtttt gtataaatca acattagcaa gtactggtgt ataaacgtgg
    22561 tcatatccca tgctaacttc tttatcaaca atgtaacgtt caatttcacg tctaattgtt
    22621 gcaccgttag gtaaccataa tggcaaacca gcaccaacta attggctatt tgtgaatagt
    22681 tctaactctt taccaatttt acgatgatca cgttctttac gctcttctaa catttgtaaa
    22741 tgtgctttca attctttttt atcaaagaaa gcagtaccgt atatacgttg taacattttg
    22801 ttgttactat ctccacgcca gtatgcacct gctgtagata atagtttaaa ctctttaatt
    22861 ttagctgttg atggaacgtg aactccacga cataaatcag taaaatcacc ttgactatat
    22921 aatgttacat tttcatcttc aggaatcgcg tcgattaatt ctaatttgta ttcatcattg
    22981 ctgaataact ctttcgcttc atctcgtgaa accacttttc gttcgatttt catattttcg
    23041 ttaacgattt gtttcattgt tttttcaatt tgttcaaagt catcagatga gatgttttgg
    23101 tcaatgtcga agtcatagta gaatccacct tctattacag gacctacacc aaatttaaca
    23161 ttaccatata accttttaat cgcgtgtgcc attaaatgtg cagtagaatg acgtaatacc
    23221 tctaacgctt cttcactacc tggtgtcaca atttcaattg atccatcagt ttcaagcggt
    23281 ttagttaaat ctacaagttg cccgttaaat ttgccggcaa cagctttttt acgtaatcca
    23341 ggactaattg attgtgctat atcttcagta gtagtacctt tatcaaacgc ctttttatta
    23401 ccatctggaa attgaatatt aatttgttcc atgttaaacc ctcctatttg ctttataaat
    23461 acttttatct gacctcgtta aaaaattgaa caacaatcat cgttttaaca ttaaacctat
    23521 taacaataaa cagggaattt atgacaccaa caaacattta tgtctgaaaa aaacaaaaaa
    23581 tcccgcccct atacaaggga cgagatcgtc gtggtaccac cctagttatc taatacaatt
    23641 tatgtattaa atatctctgc ttaagataac ggtcttgatc cgggtattca ttacaaatac
    23701 cataaatgaa gtagtaatca tctaatttat taaccatatt ctcatcaaac aatggctttc
    23761 tgtgtaatat tgattagatc atcttgtctt caatcattta aacgatttag atttgtattc
    23821 attatacacc aatcatttta aaattcaatt gtttctgaaa ttttctcctg ataaaaagta
    23881 tggtgttgac aaagatttga cacgttcaat aatacgtgct gctttagtct tctcttcacc
    23941 atcacgagtc atcgctaaat gatgttccaa ttcactatag tcaaaattag aactaaagaa
    24001 tgttggtaat tcatgaacca ttcgataatg tagcaaaggt ccaattacct catctctcac
    24061 ccatggagtc acttcttcag ccccaatatc atcaagcatt aaaatgtttg cttctcttac
    24121 gcgatgtaat ttcttttcaa aagaaccatc tttaaagcca ccttttaatg ttctaataaa
    24181 ttccggtaaa taaataattg tcgaacgtac cttcttagat ttgagctgat tcgcaattgc
    24241 acctagaata aaagatttac ctgtcccaaa tggaccataa aggtaaaggc ctttcacttg
    24301 ttccccatta gttattgctg tacaaatatc atctgctgcc atagctacat caagacggtc
    24361 tcgatgattc atataaatat ctttcaattt ggcatttaaa gtatctcgtt gcatatgatg
    24421 agatgtaatt agctcagctt caaagcgttc ttcgtcgtac ttgattttac atgggcattg
    24481 taaatagcgt attttaattc ggttattatc aacatataac tcaggcacat gcccctttac
    24541 gaaatttgga caatcagcaa atttatgacc gtcataatgt ttttgttgat ctttatactc
    24601 ttgtaacaca tttaagtctt catcaatcat agcattcgtt aattcagctc gatgcgcttc
    24661 caaaaattgc ttaacatctg ggtcattgat tacttctttt tttatctttt ctattctttt
    24721 ttcaaagtcc tgcgacgtgt taattatact tttaaattgc ttcattattg actgtcctcc
    24781 tcccattttt tagataattt atctagaaat gcttgtcgat cttgctctaa ttgttgatca
    24841 tctacgctat tatctttagc cgaatcttct tcactaggtt tatctctatt ttctaaccat
    24901 ttaggtgttt tttcttttga aatacgatta cgctgcccat agtatgaacc acgcttttgg
    24961 taatttccgc tagaaccctc atttttaggt tgattaactt ttttagcgta attatatgct
    25021 tctttagctg tcttaatacc ttttttcttc caatttgatg ctatttccaa aatatacgct
    25081 ttaggaagtt tcatatcttc ttttaacatg acaaattgca acaaaatatt aatgacgcca
    25141 aaagacattt tttcacgttc aattaattct tcaaccattg tcttttgcga tatagttggt
    25201 tctgattcag accaagaagc taacatatca attggactcg tttgttcaag taactcaaac
    25261 cattcatcac tttgtggctt tggattcact tctgaagatt tgcccgccga agatgatgta
    25321 gcaggagatt tcacctgtaa tttaggcatt tgattttcgt gttccattaa gtaatacgag
    25381 cgtgcttgtt tacgcatttc ttcaaaggat aactgttgtc cacttgtaat tgaatttaaa
    25441 ataacatgct tcatgccatc tgctgttaaa ccatataaag tcgcgagttg tgtaattaaa
    25501 cgctttgcat ctttggtaac aatgtcttga ctaataaaat gtttacctaa aatttgtctc
    25561 aacatttcaa agtcaaaaga ttcatttgat aaatcgatac cttggtacgg ttcattaatc
    25621 ggaatatcac ttgtatcgat atctattttt gtagacggca ctttaaaaac atcagtaaat
    25681 tgtcttgtta cctgtttaaa ttcactcaaa tcaatttgtt gatactcaaa gtatttcttc
    25741 aactcatgaa atcgacgatg ctcgacttca ctatataaaa agattgacaa cattggatca
    25801 ttaaaaaata aatgtgctga aggcggttga attaattggt aaacaaattg tgtttcttgt
    25861 tcatcatgtt tgacaaacgc ctttaacaat ccaatcgctt caagtaagtc catttgttgt
    25921 ctaaactcta gtaaattaat tttaagttca ttcataaaaa tataatgaga aagaatcaat
    25981 gtttcattat gactttcttt aacgaattga gtcataaaat gatataaacc cactgcttgc
    26041 gttccaatta gcggtgtata cagtcgattc aatacctcta aatgattcgt atttaaatca
    26101 aagtgttgca taactttgaa ttgatccttt ggtcttaagc cgaattcgaa ggcttgtcgt
    26161 cccatttaag catcactccg tttgttttcg cttaaaatcc cttgcatcga tgctaacaat
    26221 tgatcaacat ctttaaattc tttatagact gatgcaaatc taacatatga aacttgatca
    26281 acatgcatta acaagttcat aacgtgttca cctatatctc gtgaagacac ttccgtatga
    26341 ccttcatctc gtaattgcca ttcaaccttg ttagttatgt cttcaagttg ttgatatcta
    26401 actggtcgtt tctcacaaga acgcacaagt ccattaagta tcttttctct tgaaaactgc
    26461 tctcttgtgc catctttttt cacaactata agctgactaa cttcgatatg ttcaaatgta
    26521 gtgaaacgtg ttccacaatt ttcacattct cttcgtcttc gaatggcatt taattcatcg
    26581 gcatgccttg aatctacaac tttagattgt gtagaattac atttcgggca tttcattaca
    26641 tcaccctctt tattttgatt atgcctaatt atactataaa tctagagatg aaaaaagaat
    26701 ccctcaattt aattcattta accaaataat gaaacaataa aaaacattat atcgttactt
    26761 attaagtaat ttgcatgaca atattattgt attaaaaata aaaaacctaa ctccgaagtc
    26821 agagttaggc tataaattaa ttgtattaac ttgcacttac agtttctttt gatgtcaaaa
    26881 gtgctccaat ttgctcagca acatctacaa ctctatttga ataaccccat tcattatcat
    26941 accaagcaat aacttttact ttattccctg acatgaccat tgttgatttt gcatcaataa
    27001 tagctgaatt tggattagta ttaaaatcaa cagacactag tggttgatgt tcgacttcta
    27061 tgataccttc taaacctgca ttttcaaaag cttggtttac ttcttctgca gttacttctt
    27121 tttctaaatc aacaactaaa tcaacgagcg atacattctt tgttggtaca cgtaatgcca
    27181 tgccgtgtaa tttaccttct aattctggta atacttcttt taaagctttc gccgcaccag
    27241 tagaagtagg aataatgctt tcattacatg aacgtgcacg tcttaaatct ttatgtggat
    27301 tatcaatatt tttttggtca tttgtaatag cgtgaacagt agtcattaaa ccattaacta
    27361 ttccaaactg attatttaaa acttttgcaa ctggaccaat gcaattagta gtacatgaag
    27421 cattactaaa aatgtcaaat gcttctatat ctaattggtt atcatttacg cctttaacta
    27481 ccatttgaac atgtccacct tttgaaggac cagttaacaa aacttttttg gcacctgctt
    27541 taatatgtgc gatggcttta tcaccatgat taaatttacc agttgcatct atagcaatat
    27601 cgatatctaa ttctttccat ggcaagtttt caggattgcg atcagcaacc aatttaattt
    27661 tatgatctcc aacttgcaat ccattttcaa tcggttcaac ttttagatta tattttccat
    27721 gtgtcgtatc gtaattgatt aaatgtgcaa ttgtttcggg tggataacta gcatttatcg
    27781 ctactacatt taaattttta ttttgtaatg caatacgtaa taccattctt ccaattctac
    27841 ccataccatt aattgcaata ttcgttgaca ttaaaagcac cccttgatct ttatgtgtta
    27901 tactttatgg aattagtata gcatattata tgaaatttga aagcgttttc cgttgattta
    27961 tttatctttt ttataaaaaa tagtcattac ttacatacat caacgcgtac gtaaagtaat
    28021 gacttattta tagtgtaata ttaatcttct tctccgtaat tcagcttttc aatataacct
    28081 tcttcttcta acaatctctc aaggttttgt tttaattcaa gtttatcccc taaattatcg
    28141 ataacatgat cggccattcg gcttttttta tcaatagaaa tttggctata gacacgtgct
    28201 ttcgcatctt ctaatgacaa attattacgt tgcattaaac gatccatttg tatactttca
    28261 gaagtgtata caacccacac ttcgtctact gtattttcca attcattttc aaataataat
    28321 ggaatatcca tgattacatt atatccttgt tttaaatatt cttgcttttc ttcttccata
    28381 atatctcgca cgataggatg tatgatagca tttaattcta agcgtttttc tggatgatta
    28441 aacactagat cacccatata acgacgattc atctcaccat tttcatcaat tgcttcatca
    28501 ccaaagactt ctcgtacttg agctaaacct ttactcccct ttttaacagc ttccctggct
    28561 gctttatcag catctactac tttaaaaccg aatacggata agagttctga tactgttgat
    28621 tttcctgagg cgattccacc tgttagacca ataactttcg gcataatttc actctttctt
    28681 tatttttgac atactggaca ataatgacta tttcttgtcg cgatgatttt tgtttcaatt
    28741 tgacttccac acactttgca taccggctgc ttatatacat taagatgcaa ttgcatctca
    28801 ccagtttttc catcagcatg acgataatct gaaatacttg taccgccata tttaatacct
    28861 tcttctagta cttctctaac ataataaaaa accatttctt gttgttggtg tgttaagtct
    28921 tttacttttt tatctggtaa aacacctgca cgaaacaacg cttcacatgc gtaaatattt
    28981 ccacaacctg cgattacttt atgatccaaa atcacttgtt tgattggttt attcttatta
    29041 gactgttgat gaattcgatt taaataatac gtcaatgctt catttgaaaa aggttcaggc
    29101 gctatttcta aaaatgaagg ataagatgct acagacgcaa catttctaat ttctccaaaa
    29161 cgacgtatat ctgaataaat taactttttg tcatttgaca actcaaaaat aacatgccaa
    29221 tgcttacgat aattaggtat cataatatct tcaagttcat ctacaatgaa aaaaccgccc
    29281 gccataccta aatgactaat taatgtacgt tgttctcgtt tattatctag ctgaaaaacg
    29341 atatatttac ttcttcgttc tacatttgta atggtatagc cttccgataa agttttaaaa
    29401 gtatctaatt caattccttt tataattgtt tccttgcctt gagctttacc ttcgattact
    29461 ttatccgaaa atataacgtg ttcaattttt tgatttataa cgtagggttc aattcctctt
    29521 tttacatgtt ctacttctgg taattcgggc ataccattaa cctcacttta ttttgcatca
    29581 taccaggttg caccataact tgagtctact tttaatggaa catctaattg caatgcattt
    29641 tccattatct cttctacaaa ttcactaaat gaatctactt ctgacttagg tacttcaaaa
    29701 attaattcat cgtgtacttg taataatagt ttagcttgat atgttgtctc tttcattttt
    29761 tgagcaaatt taaccattgc cagtttaatg atatctgcag cactgccctg tattggcgta
    29821 ttcatagcag tacgttcagc aaagccgcgt aaattaaagt tacgactcgt aatatcagga
    29881 atatagcgtc gacgatgtag caatgtttcc acgtaaccta aagctttggc atcttttaca
    29941 atatcagaca tatattgttt tacacctggg aaactagcta aataatcatc aatgaatgct
    30001 tttgcttttt tacgagtaat acctaaactt tgacttaaac cataatcact tatcccataa
    30061 acaattccaa agttaactgc ttttgcttga cgacgcatta aactatcgac ttgatcagct
    30121 tctacaccaa atactttcat agcagttgct gtatgaatat catcgccgtt gataaatgct
    30181 tctttcatac tctcatcttg tgtaatgtgt gctaatacac gcaattcaat ttgagaataa
    30241 tctgctgata atataacgct atcttttgaa gttggtttaa aggcttttct tattttacgc
    30301 ccttcttcaa gtctaaccgg aatattttgt aaattaggat ctacacttga taaacgtcca
    30361 gtttgcgcta aagtttgatt aaaacgtgta tggatacgtt gatcatcact aattaccttt
    30421 tgcaatcctt caacataagt agactgtaac ttagataatt gacgatattc taaaatataa
    30481 tcaatgatag gatgttcacc ttgcaattgc tctaagacat ctacagcagt agaatatcct
    30541 gttttcgtct ttttaataac aggtaattgt aatgtctcaa acaatacaac acctaattgc
    30601 ttaggagaat ttatattaaa atcttcacca gctgcatcat ggatatttcg aatcaagacg
    30661 tctaattttt cttgaatttc tttttccatt tcttctaaat catgaacatc tgtaaatata
    30721 ccaatttctt ccatttcact taaaatctta gctagcggta gctctaaatc agccaagagt
    30781 tctacctgat tgtattcttc taattgttta tccatatttg gtttcgcaaa gtaaattgca
    30841 tcagtaatag aagcaacata tggatttaaa acatcatctt caggtacctt aaatttctta
    30901 ccttttccat atatactcac atcgtctttc acaaaacttt gaccgtacaa tgaaacaact
    30961 gattgaacat cactaatcgt acgagatgga tcaattatat aactggccaa cataatatcg
    31021 aaagaaatat tttgaatatc aatccccaat ctatgtgatg ctacatatgt ttttttagca
    31081 tcatatacga cttttttcga attcggattt tctaaccatg aaactagttc gacataatta
    31141 tttatgtcat ccgcattaat tacaatatgt ttctcacctg taaataaaga gaattttaaa
    31201 atattatttc gcaaatagtt accaccgtct aattcgaaat ggatggccgc ttctttcaat
    31261 gaagtaaaat caatattatc aaaagacgtt tcaatttcaa atgtcttttc tattgcatct
    31321 tcaacgcttg ctgattgatc aatgtcagcc aacaattgtt tgaattctaa cttcttaaac
    31381 aattcgattt tttcttgttg ttcatcttga tgagtcatta acgtatcttc aagttttact
    31441 tcaatcggac tatctacatt aatcgttgct aattctttac tcattaatgc atcttctttg
    31501 ctattttgaa gtttttcttt taacttttta cctgaaattt catctaaatg ttcatagaca
    31561 ccttctactg tgtcaaattg gtttagcaat tttattgctg ttttctctcc aacacctgca
    31621 acacctggta tattatcaga agtatctccc attaatcctt tcatatcaat aatttgatta
    31681 ggtgttaacc cgttgtattt ttccgcaata aagtcaggtg tataatgatc aacatcagta
    31741 acaccttttt tagtgtaata aatggttaca ttatccgttg caagttgtgt taaatctcgg
    31801 tctcccgtaa taataattgt ctgaaagccc gctttatctg cttctttact taaagttccg
    31861 ataatatcat ctgcctcata gttatctaat tcataacgtt taatatgata agcatctaat
    31921 aattggcgaa tataaggaaa ttgctcactt agttcaggcg gcgttttctg gcgtccacct
    31981 ttatattcac tatatttttc atgtctgaaa gtcgttttac ctgcatcaaa cgctactaaa
    32041 aaatgatttg gcttttcttc ttttaaaatc ttctctagta acattgcaaa accatatact
    32101 gcattggtat gaatgcctgc tttgtttgat aacaaaggta atgcataaaa agctctaaaa
    32161 cttaagctat taccatcgat taatactaat ttattcacaa ttttaacctc cagaactaat
    32221 ttatatatat tttagcatat tcgactgtga tgtcgtaatt aaagaaacta tctcatagag
    32281 tatttataca cgacctaatt tcaaataaaa caagtgccta tatagactta gctaaaaaat
    32341 aaaaaagaca taatcatgat tgttcttgat gagcactcca taaagtcagg ttaaaagtcc
    32401 aacttttgag atgcacatta tcatttcatg attatgtcta ctttttaata tttttatgct
    32461 gctattttaa atttttatag gtaagaataa gttatgaatc gtctgaacca aatggaatat
    32521 atttaacttt ggtcattttc ggtaattctt cataattatt aaaccactct tggtaatttt
    32581 tattgattgg tgacggatga tgcatataat gttcaaacgg caatgattcc actgtataaa
    32641 cctcttgtcg tggatgatct ttaatttgtt gttttaataa ctgaactctt ttttcatgtt
    32701 cataatgaac ataaataaat gcactaagat atatcacagc taaaactagt gatgcacctt
    32761 taataaaatt aacattgatt gacttatatt tccgaaattc ttttaataaa ataattaaaa
    32821 tgattacatg tatcgtataa acaatcaaaa aattacctgg ttctattgga gtaacaatga
    32881 ctagtgtcga cgccgaaaca catattgcaa taagtaagga atataaagtg atttgtgttt
    32941 tacgatcatt aatagacaaa taaataccta caaatatcga aaacgcaaag taaccacata
    33001 caattacgtt cacaaaacca accaatccaa tatctgtatt tttatttaat aaaaactgat
    33061 tgtaaaatag taaataataa agcggtaaag tgataaatcc tatcataatg atacgacgct
    33121 ttaatattgt taaatgtaca taccgatcac ttctaagcag tagataaata ataagcgctg
    33181 caatcatact taaaattata atctgactga aaatgacacc atatggaagt gacgttgata
    33241 tcatttctgc aaattttgaa aagatacctt gattatttga aacttgttga tattctgatc
    33301 cttcaaataa aattttgcga taatttggat tggaaaacat aatgattgta cctatagtag
    33361 caatcataaa tgaaaacaat aatttataat taagtgttcg atttgcagta aattcataca
    33421 gaaaagctaa aattaaaatg atacagtgga ataatgtcac attctccata aataattgac
    33481 cgaagaagca taaaacatag aatagtacag taacacttac cggctgcttt tctttatata
    33541 taattgcatt aatacaataa taaataataa agagtgaaat tagtgttgat gtcgcataat
    33601 tataaaatcc tgcaaaccag ccatatgtat ctgcataaat agcacttggt aaaattaaca
    33661 ttaaagaaaa tgctaacaaa taatagcttg tccacgcttt acaacgtgta atgtgcataa
    33721 tcatccaaat gatgcccata ctaatgaggc catatgaaag ccaacgtaac cagcttacat
    33781 gtacagctat aatttcaaag atatttccga tatagcgacc attaagtgat gcaaatccta
    33841 cttttaaaat atcagtatta taattgctaa accattgtaa atcatcgtgc atgagtggta
    33901 gtaagatacc cataaaagta taaaacaata atatcgcaat taatatcaaa gttgtcttgt
    33961 gtaattgaat tgttttcact ttgctaatcc tcaaatctag ttaaattttc ctcaacttgt
    34021 aggtcgaaaa attaattcaa tatttttaat gtatttctaa ttttcaccta tgcatgtttc
    34081 ctcaatcaaa ttagataaac aaggtattta atattacttt caacaattta tctaaatcgc
    34141 ccctcgtctt tttctatgac gaatgattac acttgtctat tcaagtgttt aaattaagat
    34201 ttatttccgt tcaaataaaa cttattactt tttaattaag catctatttc aagcgcgtta
    34261 ctaaaa
//
LOCUS       DALPQQ010000015        33953 bp    DNA     linear   BCT 22-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus strain K18-6-464
            SAMD00233528-rid16434743.denovo.015, whole genome shotgun sequence.
ACCESSION   DALPQQ010000015 DALPQQ010000000
VERSION     DALPQQ010000015.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMD00233528
            Sequence Read Archive: DRR236061
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 33953)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 33953)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001543423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001543423.1
            Genome Coverage       :: 77x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/22/2022 17:09:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,811
            CDSs (total)                      :: 2,743
            Genes (coding)                    :: 2,689
            CDSs (with protein)               :: 2,689
            Genes (RNA)                       :: 68
            rRNAs                             :: 2, 4, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 4, 2 (16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 54
            CDSs (without protein)            :: 54
            Pseudo Genes (ambiguous residues) :: 0 of 54
            Pseudo Genes (frameshifted)       :: 27 of 54
            Pseudo Genes (incomplete)         :: 27 of 54
            Pseudo Genes (internal stop)      :: 10 of 54
            Pseudo Genes (multiple problems)  :: 10 of 54
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..33953
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMD00233528-rid16434743.denovo.015"
                     /strain="K18-6-464"
                     /db_xref="taxon:1280"
                     /geo_loc_name="Japan: Niigata"
     gene            complement(74..1954)
                     /gene="vraE"
                     /locus_tag="O7798_000620"
     CDS             complement(74..1954)
                     /gene="vraE"
                     /locus_tag="O7798_000620"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501485.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide resistance ABC transporter permease
                     subunit VraE"
                     /protein_id="HDC2862894.1"
                     /translation="MTFNHIVFKNLRQNLKHYAMYLFSLFFSIVLYFSFTTLQFTKGV
                     NNDDSMAIIKKGALVGSIFLFIIIVIFLMYANHLFVKRRTREFALFQLIGLTRQNILK
                     MLALEQMIVFLITGVVGVLCGIAGAQLLLSIVSKLMSLSINLSIHFEPMALVLTIFML
                     IIAYVLILFQSALFLKRRSILSMMKDSIKTDATTAKVTTAEVISGVLGIAMIALGYYM
                     ATEMFGTFKALTMAMTSPFIILFLTVVGAYLFFRSSVSLIFKTLKKSKNGRVSITDVV
                     FTSSIMYRMKKNAMSLTIIAIISAVTVTVLCFAALSKSNTDQTLTSMAPNEFNVVATQ
                     DAKQFETKLSQQQITFSKNAYETITVDNVNDQVITLENGSDSGRTNSILSANNKLTGN
                     NAIITNTKSLPNIINIHLNKDLVVKGTKNETFRVTQEDKGKVYPLNLSFNSPVIEVSP
                     EKYQQLKTQNNVHTFYGYDIKQTSQKEKAQAIAKQFGDKVITYDEMKKEVDATNGILI
                     FVTSFLGLAFLVAAGCIIYIKQMDETEDELSNFRILKRIGFTHTDMLKGLLLKITFNF
                     GLPLLIAILHAVFAAIAFMKLMGNISFMPVIVVIVVYTLIYITFALIAFVHSNKLIKK
                     TI"
     gene            complement(1944..2702)
                     /gene="vraD"
                     /locus_tag="O7798_000621"
     CDS             complement(1944..2702)
                     /gene="vraD"
                     /locus_tag="O7798_000621"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501484.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide resistance ABC transporter ATP-binding
                     subunit VraD"
                     /protein_id="HDC2862895.1"
                     /translation="MTILSVQHVSKTYGKKHTFQALKDINFDIQKGEFVAIMGPSGSG
                     KTTLLNVLSSIDQISSGSVIANGQELNKLNQKALAKFRKESLGFIFQDYSILPTLTVK
                     ENIMLPLSVQKMSKATMEENYKAITTALGIYDLGNKYPSELSGGQQQRTAAARAFVHK
                     PQIIFADEPTGALDSKSANDLLQRLEEMNKSFDTTIVMVTHDPVAASFAERVIMLKDG
                     QIHTQLYQEGRSKQAFYEDIVHLQSVLGGVSNDI"
     gene            2985..3497
                     /locus_tag="O7798_000622"
     CDS             2985..3497
                     /locus_tag="O7798_000622"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501483.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HdeD family acid-resistance protein"
                     /protein_id="HDC2862896.1"
                     /translation="MEKGNQGIKWSSLIMGVLLLMLAVVIFTFPIENFYAITWLIGLF
                     VLINGVIQIVYRRKAKALVGGNQNWILFMGIVDILFGLLVIFNVGASSAFFIYMFAFW
                     FIFSSISGLFTFSGSGSLKLISVIFNLLGIVFGVILLFNPLMGIVFISTMIAIAFVFV
                     GVIYVVDALA"
     gene            complement(3631..4425)
                     /locus_tag="O7798_000623"
     CDS             complement(3631..4425)
                     /locus_tag="O7798_000623"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501482.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arylamine N-acetyltransferase"
                     /protein_id="HDC2862897.1"
                     /translation="MNIAKLENYLQIDSSRYNRPSIEALNYYATRFMLTVPFENIDVQ
                     NSKPISINIDALFNKIVHDKRGGFCYELNTFFKAYLQQKGFNPELMSATIHTPGGGRS
                     LNGSHASLVVSINDVFYVTDVGFGDLPLHAIPITSSEHTQPITDISGTFRAIFNNEDK
                     DIFYVQKFENDHWHTKYEAEFKPKQIEDFNSNIEYNQTHPDSIFVQHLLITMPQSFGR
                     ATMSENHLTLTRNGSSEKFDVTKDNYKHFLEKYFGLNVTINRIEKQ"
     gene            complement(4668..5684)
                     /locus_tag="O7798_000624"
                     /pseudo
     CDS             complement(4668..5684)
                     /locus_tag="O7798_000624"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501481.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="HoxN/HupN/NixA family nickel/cobalt transporter"
     gene            complement(5849..6424)
                     /locus_tag="O7798_000625"
     CDS             complement(5849..6424)
                     /locus_tag="O7798_000625"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501480.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding protein"
                     /protein_id="HDC2862898.1"
                     /translation="MTLPKIGKPATRALNSQGIYTLEAVSQYTKSSLMEMHGVGPKAI
                     SILEQALFQHQLHFKTEVQSSLPFKLTGDVSCNHAPKRQQMIDFIVVTAALDIELLRS
                     LVTTEFIWSVPGRFDIYGPQILIQELSNHYNQVASLNIHSSITHGCLGSMHGIEILKT
                     GKEIHFAHFFEFENHKKDAKLSKVTSYIVVG"
     gene            6649..7557
                     /gene="rarD"
                     /locus_tag="O7798_000626"
     CDS             6649..7557
                     /gene="rarD"
                     /locus_tag="O7798_000626"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501479.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EamA family transporter RarD"
                     /protein_id="HDC2862899.1"
                     /translation="MNSEYKKGIFLALSAYILWGILPIYWQFVDAIGAFEILAFRIIF
                     SAIFMIFILAVGQKQRNAFQRDMNQLLGKPIQLLAIVVAGYVITLNWGTFIWAVTNGH
                     VLQTSLGYYINPLVSILLALIFLKERFNKFEWLAILFAFIGVLYMTLKIGEFPIVSII
                     LALSFGTYGLLKKVVHIDAISSITIECIVTAPAGLIYVIYLWQQHQMSFGLNMSSFWL
                     LFSGAITAIPLILFSAGAKRIPLSLIGFIQYVGPTIMFVLGIFVFKEPFSIDQLITFI
                     FIWTGIVLYSLSQYIKLKKHPVAKTL"
     gene            complement(7970..9388)
                     /locus_tag="O7798_000627"
     CDS             complement(7970..9388)
                     /locus_tag="O7798_000627"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501478.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anion permease"
                     /protein_id="HDC2862900.1"
                     /translation="MENTVKYRKFILPIVVGLLIWALTPFKPDAVDPTAWYMFAIFVA
                     TIIACITQPMPIGAVSIIGFTIMVLVGIVDMKTAVAGFGNNSIWLIAMAFFISRGFVK
                     TGLGRRIALHFVKLFGKKTLGLAYSIVGVDLILAPATPSNTARAGGIMFPIIKSLSES
                     FGSKPKDGSARKMGAFLVFTEFQGNLITAAMFLTAMAGNPLAQNLASSTSNVHITWMN
                     WFLAALVPGLVSLIVVPFIIYKIYPPTVKETPNAKSWAENELATMGKIALAEKFMIGI
                     FVVALTLWIVGSFIHIDATLTAFIALALLLLTGVLTWQDILNETGAWNTLVWFSVLVL
                     MADQLNKLGFIPWLSKSIATSLGGLSWPIVLVILILFYFYSHYLFASSTAHISAMYAA
                     LLGVAIAAGAPPLFSALMLGFFGNLLASTTHYSSGPAPILFSSGYVTQKRWWTMNLIL
                     GFVYFIIWIGLGSLWMKVIGIF"
     gene            complement(9626..10090)
                     /gene="bstA"
                     /locus_tag="O7798_000628"
     CDS             complement(9626..10090)
                     /gene="bstA"
                     /locus_tag="O7798_000628"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501477.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bacillithiol transferase BstA"
                     /protein_id="HDC2862901.1"
                     /translation="MTTKTVFDVIDMGLGYLVNVYDAWKVEKVLDDYHKPFSNTIHWQ
                     FGHVLTIFESALAVAGKENIDLNIYRPLFGNGSSPDEWKDEVPSIERILEGLQTLPER
                     ARNLTEDDLAIELKQPIVGCNNLEELLVLNAIHIPLHAGKIEEMSRILKNLK"
     gene            10257..10595
                     /locus_tag="O7798_000629"
     CDS             10257..10595
                     /locus_tag="O7798_000629"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501476.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PadR family transcriptional regulator"
                     /protein_id="HDC2862902.1"
                     /translation="MSVSDQIMKGLLDGAILGLIAQGETYGYEIMTKLKNQEFPEISE
                     GSIYPVLMRLNKKGYVDTTIKKSSNGGPRRKYYTITDSGLKELKVFKSKWQVLNKGMI
                     NLFGGENDVK"
     gene            10585..11352
                     /locus_tag="O7798_000630"
     CDS             10585..11352
                     /locus_tag="O7798_000630"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501475.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDC2862903.1"
                     /translation="MLSKQSQDFLEKLRVELLFRGKTEAEVEELLEELEDHLTMAEKN
                     NEDTSSIINTPIKSMADQLSPEISLTTGLYKYITLYFAFILAVIIIPRFLDLGTFDVT
                     IAFLLYIASIVILGVVIGMLILRNTLVRFGDQKITYVINVTYGIIVFLWMILGGLIIK
                     KYPIYSFFELSDKQSFIVGLVLLIALIGTCILIKQKIYALIVLVISLPSLIARIAAIF
                     SKEPDTFNLVSVSILIILNIAFIIYTFVNFRKLKKED"
     gene            complement(11471..12109)
                     /gene="pcp"
                     /locus_tag="O7798_000631"
     CDS             complement(11471..12109)
                     /gene="pcp"
                     /locus_tag="O7798_000631"
                     /EC_number="3.4.19.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501474.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyroglutamyl-peptidase I"
                     /protein_id="HDC2862904.1"
                     /translation="MHILVTGFAPFDNQNINPSWEAVTQLEDIIGTHTIDKLKLPTSF
                     KKVDNIINKTLASNHYDVVLAIGQAGGRNAITPERVAINIDDARIPDNDDFQPIDQAI
                     HLDGAPAYFSNLPVKAMTQSIINQGLPGALSNSAGTFVCNHTLYHLGYLQDKHYPHLR
                     FGFIHVPYIPEQVIGKPDTPSMPLEKIVAGLTAAIEAISNDEDLHLALGTTE"
     gene            complement(12261..13217)
                     /locus_tag="O7798_000632"
     CDS             complement(12261..13217)
                     /locus_tag="O7798_000632"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501473.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rhodanese-related sulfurtransferase"
                     /protein_id="HDC2862905.1"
                     /translation="MNYQVLLYYKYMTIDDPEQFAQDHLAFCKAHHLKGRILVSTEGI
                     NGTLSGTKEETEQYMAHMHADERFKDMVFKIDEAEGHAFKKMHVRPRKEIVALDLEDD
                     IDPRHTTGQYLSPVEFRKALEDDDTVIIDARNDYEFDLGHFRGAIRPNITRFRDLPDW
                     IKENKALFADKKVVTYCTGGIRCEKFSGWLLKEGFEDVAQLHGGIATYGKDPETKGEY
                     WDGKMYVFDDRISVDINQVEKTIIGKDWFDGKPCERYINCANPECNKQILVSEENETK
                     YLGACSYECAKHERNRYVQANNISDNEWQQRLTNFDDLHQHA"
     gene            13461..14432
                     /locus_tag="O7798_000633"
     CDS             13461..14432
                     /locus_tag="O7798_000633"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501472.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SMP-30/gluconolactonase/LRE family protein"
                     /protein_id="HDC2862906.1"
                     /translation="MSQQDLPTLFYSGKSNSAVPIISESELQTITAEPWLEISKKGLQ
                     LEGLNFDRQGQLFLLDVFEGNIFKINPETKEIKRPFVSHKANPAAIKIHKDGRLFVCY
                     LGDFKSTGGIFAATENGDNLQDIIEDLSTAYCIDDMVFDSKGGFYFTDFRGYSTNPLG
                     GVYYVSPDFRTVTPIIQNISVANGIALSTDEKVLWVTETTANRLHRIALEDDGVTIQP
                     FGATIPYYFTGHEGPDSCCIDSDDNLYVAMYGQGRVLVFNKRGYPIGQILIPGRDEGH
                     MLRSTHPQFIPGTNQLIICSNDIEMGGGSMLYTVNGFAKGHQSFQFQ"
     gene            complement(14581..15096)
                     /locus_tag="O7798_000634"
     CDS             complement(14581..15096)
                     /locus_tag="O7798_000634"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501471.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polyisoprenoid-binding protein"
                     /protein_id="HDC2862907.1"
                     /translation="MTNFTFDGAHSSLEFQIKHLMVSKVKGSFDQFDVAVEGDINDFS
                     TLKATATIIPSSINTKNEARDNHLKSGDFFGTDEFDKITFVTKSVSESKVVGDLTIKG
                     ITNEETFDVEFNGVSKNPMDGSQVTGIIVTGTINREKYGINFNQALETGGVMLGKDVK
                     FEASAEFSISE"
     gene            15476..16324
                     /locus_tag="O7798_000635"
     CDS             15476..16324
                     /locus_tag="O7798_000635"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501470.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S-adenosyl-l-methionine hydroxide
                     adenosyltransferase family protein"
                     /protein_id="HDC2862908.1"
                     /translation="MGNYLVLQSDFGLSDGAVSAMYGVAYTVSDDIRVENLTHDIPPY
                     DIWVASYRLYQTVKYWPKGTVFVSVVDPGVGSDRRSIACLTYSGHYIITPDNGSLSHI
                     KHYEGIKKVIEIDEVKSRLPHSEESHTFHGRDVYAYNGARLAANKIAFERLGQAINVD
                     SIEALEIREVTKNEDSVTGSIDILDIRFGSLWTNIPLAFLKSLEIVHGNNLVVTIYHQ
                     DKKVYQNIIKFARSFADVNVGEPLVYVNSLVNIGVAVNQDSFSDLYHIGTGNDWTIHL
                     SKAPSI"
     gene            16353..16907
                     /locus_tag="O7798_000636"
     CDS             16353..16907
                     /locus_tag="O7798_000636"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501469.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ECF-type riboflavin transporter
                     substrate-binding protein"
                     /protein_id="HDC2862909.1"
                     /translation="MKKQDISVKTVVAIGIGAAVFVILGRFVVIPTGFPNTNIETSYA
                     FLALISAIFGPFAGLMTGLVGHAIKDFTTYGSAWWSWVICSGIIGCLYGWIGLKLNLS
                     SGRFSRKSMVYFNIGQIIANIICWALIAPTLDILIYNEPANKVYTQGVISAVLNIISV
                     GIIGTILLKAYASSQIKKGSLRKE"
     gene            16960..18672
                     /locus_tag="O7798_000637"
     CDS             16960..18672
                     /locus_tag="O7798_000637"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501468.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HDC2862910.1"
                     /translation="MTEPIISFKDFSFQYHSQAAPTLQNINVDIYPGEKVLVVGASGS
                     GKSTFANCINGLIPFKTKGNITGELYINNQDATVSCLHDRSNVVGTVLQDTDGQFIGL
                     TAAEDMAFLLENNCVEQDDMKKNVSYWAEKVGMIEHLNHRPQDLSGGQKQRVSLGGIL
                     IHRTPILILDEPLANLDPATGHETLRLLNNIHEETKSTMIIVEHRLEESLDDTFDRVL
                     LFKDGKIIANTTPSDLLKSSKLKEAGIREPLYCTALKYAEVDVESIDNLANLRDVCMS
                     EHVKFKVKKWIDETSANNDNKYKSEPLLELNEVCVQYSDYSNSVLNNVQLNVYRREML
                     SIVGHNGAGKSTLAKAICGFLDITGNIQFCNRGFNQLSISERSEFVGYVMQNPNHMIS
                     EKMIYDEVALGLRARGMKESDIKIRVENVLKICGLYAFRNWPIAALSYGQKKRVTIAS
                     VLVLNPEIIILDEPTAGQDFYHYNEIMSFLIELNRQGKTIIMITHDMHLLSEYSSRTV
                     VLSKGQVVADTTPVLVLNDKKICEIASLRQTSLFEMAEYIGISEPQKLVQLFINHDRK
                     VRRQ"
     gene            18669..19502
                     /locus_tag="O7798_000638"
     CDS             18669..19502
                     /locus_tag="O7798_000638"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501467.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="energy-coupling factor transporter transmembrane
                     protein EcfT"
                     /protein_id="HDC2862911.1"
                     /translation="MNQYNTIGFHPGNSRIHQLNATVKLLFLLVVSISAMVTYDTRYL
                     ILISASSILLVKYAHIEWKQVRFVVKFILFFTILNIIAVYIFDPEYGVKIYNQRTELV
                     NGIGRFTLTSQELFYLFNLILKYISTVPLALIFLFTTNPSHFAASLNQLGVNYKISYA
                     VSLALRYIPDIQETYFNISQAQQARGYDNSKKAKFTSRVKGIKRIVLPLIFSSIERID
                     TISTAMELRQFGQYKRRTWYVKKQLKKDDYVVLCLTLILLMLVVTLFFLNNSRYFNPW
                     H"
     gene            19549..20046
                     /locus_tag="O7798_000639"
     CDS             19549..20046
                     /locus_tag="O7798_000639"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501466.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HDC2862912.1"
                     /translation="MINTERLNLMIPSSSHLIELYNICSHPQANIYTPKGLHNSKLDT
                     QRWIEKWRNHWQQYQFGYFVLVKKIDCSVIGICGYEYRQLKKETVLNLFYKLHPSFEG
                     QGYACEAITAITNFVNYIDQETVKVIRTNKCNQRSINLAERLKFKRDDTMDDIINQGD
                     IVFYK"
     gene            20164..21288
                     /locus_tag="O7798_000640"
     CDS             20164..21288
                     /locus_tag="O7798_000640"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501465.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polysaccharide deacetylase family protein"
                     /protein_id="HDC2862913.1"
                     /translation="MHKKYLLLFFLLLSVALLYSCSKQNEKAQNKSVNPNEYAKHKSK
                     MDEHWETYHGQVYHVFYHPLITDPKVAFTGDTHQAKGNNDWMITVSEFKKSLNELYKN
                     NYIIVNPHDVYDLSSHHVKAKKIKLPKGKKPLIISIDDMNYYSYMRHHGYADRLVLDK
                     NKHVVSETTDKKGHATYSDDNDIVPILNKFVKEHPDFSLNGEKGVVALTGYEGVLGYR
                     TNELTSKDYTKNKKAAEEVVRAMKRDGWSFASHSYGHINFEKTSLEGIKRDTKRWKDE
                     VEPIVGKTDMFVFPHGAQDRHTQAYDYLVDEAEFKFIAGVGPNNFTDISATNVYQDRV
                     AIDGLNLFEFKYKLKPFFNPENVYSKQDRRYFKGNRDYEE"
     gene            21593..22411
                     /locus_tag="O7798_000641"
     CDS             21593..22411
                     /locus_tag="O7798_000641"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501464.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP phosphoribosyltransferase regulatory
                     subunit"
                     /protein_id="HDC2862914.1"
                     /translation="MNNSEQLIALKESETAFLKYFNKADYELVDFSVVEKLDWKQLNH
                     EDLQQMGERNFWQHEHQIYALRNDFTDQLLRYYSMYPTAATKVAYTGLIIRNNEAAVQ
                     VGLENYAPSLANVQQSLKLFIQFIQQQLRDNVHFVVLGHYQLLDALLDKSLQTPDILS
                     MIEERNLSGLVTYLSTEHPIVQILKENTQQQLNVLEHYIPNDHPALVELKIWERWLHK
                     QGYKDIHLDITAQPPRSYYTGLFIQCHFAENESRVLTGGYYKGSIEGFGLGLTL"
     gene            22429..23043
                     /locus_tag="O7798_000642"
     CDS             22429..23043
                     /locus_tag="O7798_000642"
                     /EC_number="2.4.2.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501463.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP phosphoribosyltransferase"
                     /protein_id="HDC2862915.1"
                     /translation="MLRIAIAKGRLMDSLINYLDVIEYTTLSETLKNRERQLLLSVDN
                     IECILVKGSDVPIYVEQGMADIGIVGSDILDERQYNVNNLLNMPFGACHFAVAAKPET
                     TNYRKIATSYVHTAETYFKSKGIDVELIKLNGSVELACVVDMVDGIVDIVQTGTTLKA
                     NGLVEKQHISDINARLITNKAAYFKKSQLIEQFIRSLEVSIANA"
     gene            23036..24286
                     /locus_tag="O7798_000643"
     CDS             23036..24286
                     /locus_tag="O7798_000643"
                     /EC_number="1.1.1.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501462.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidinol dehydrogenase"
                     /protein_id="HDC2862916.1"
                     /translation="MLNAQQFLNQFSLEAPLDESLYPIIRDICQEVKVHGDKALKMYN
                     LTFDHTKTDHLEISHEQIKAAFDTLDEKTKQALQQSYERIKAYQESIKQTNQQLEESV
                     ECYEIYHPLESVGIYVPGGKASYPSTVLMTATLAQVAGVENIVVVTPPQPNGVSQEVL
                     AACYITQVDQVFQVGGAQSIAALTYGTETIPKVDKIVGPGNQFVAYAKKYLFGQVGID
                     QIAGPTEIALIIDETADLDAIVYDVFAQAEHDELARTYAISEDAQVLKDLESRIAKAL
                     PNVDRYDIVSKSIANQHYLIHASNFDEACHVMNTIAPEHASIQTVNPQPYIEKVKYVG
                     ALFIGHYSPEVIGDYVAGPSHVLPTNRTARFTNGLSVNDFLTRNTVIHLSKDTFEQIA
                     DSAQHIAHVEALYNHQQSILIRQS"
     gene            24302..25315
                     /locus_tag="O7798_000644"
     CDS             24302..25315
                     /locus_tag="O7798_000644"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501461.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidinol-phosphate aminotransferase family
                     protein"
                     /protein_id="HDC2862917.1"
                     /translation="MIYIDKNESPVTPLDEKTMTSIISATPYNLYPDAAYEQFKEAYA
                     KFYGLSPEQIIAGNGSDELIQKLMLIMPEGPALTLNPDFFMYQAYAAQVNREIAFVDA
                     GSDLTFDLETILTKIDEVQPSFFIMSNPHNPSGKQFDTAFLTAIADKMKALNGYFVID
                     EAYLDYGTAYDVELAPHILRMRTLSKAFGIAGLRLGVLISTAGTIKHIQKIEHPYPLN
                     VFTLNIATYIFRHREETRQFLTMQRQLAEQLKQIFDTHVADKMSVFPSNANFVLTKGS
                     AAQQLGQYVYEQGFKPRFYDEPVMKGYVRYSIATASQLKQLEEIVKEWSAKYDLSKTT
                     KHS"
     gene            25284..25862
                     /gene="hisB"
                     /locus_tag="O7798_000645"
     CDS             25284..25862
                     /gene="hisB"
                     /locus_tag="O7798_000645"
                     /EC_number="4.2.1.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501460.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="imidazoleglycerol-phosphate dehydratase HisB"
                     /protein_id="HDC2862918.1"
                     /translation="MIYQKQRNTAETQLNISISDDQSPSHINTGVGFLNHMLTLFTFH
                     SGLSLNIEAQGDIDVDDHHVTEDIGIVIGQLLLEMIKDKKHFVRYGTMYIPMDETLAR
                     VVVDISGRPYLSFNASLSKEKVGTFDTELVEEFFRAVVINARLTTHIDLIRGGNTHHE
                     IEAIFKAFSRALGIALTATDDQRVPSSKGVIE"
     gene            25859..26437
                     /gene="hisH"
                     /locus_tag="O7798_000646"
     CDS             25859..26437
                     /gene="hisH"
                     /locus_tag="O7798_000646"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501459.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="imidazole glycerol phosphate synthase subunit
                     HisH"
                     /protein_id="HDC2862919.1"
                     /translation="MIVIVDYGLGNISNVKRAIEHLGYEVVVSNTSKIIDQAETIILP
                     GVGHFKDAMSEIKRLNLNAILAKNTDKKMIGICLGMQLMYEHSDEGDASGLGFIPGNI
                     SRIQTEYPVPHLGWNNLVSKHPMLNQDVYFVHSYQAPMSENVIAYAQYGADIPAIVQF
                     NNYIGIQFHPEKSGTYGLQILRQAIQGGFIND"
     gene            26430..27134
                     /locus_tag="O7798_000647"
     CDS             26430..27134
                     /locus_tag="O7798_000647"
                     /EC_number="5.3.1.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501458.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="1-(5-phosphoribosyl)-5-((5-
                     phosphoribosylamino)methylideneamino)imidazole-4-
                     carboxamide isomerase"
                     /protein_id="HDC2862920.1"
                     /translation="MIELWPAIDLIGSTSVRLTEGKYDSEEKMSRSAEESIAYYSQFE
                     CVNRIHIVDLIGAKAQHAREFDYIKSLRRLTTKDIEVGGGIRTKSQIMDYFAAGINYC
                     IVGTKGIQDTDWLKEMAHTFPGRIYLSVDAYGEDIKVNGWEEDTELNLFSFVRRLSDI
                     PLGGIIYTDIAKDGKMSGPNFELTGQLVKATTIPVIASGGIRHQQDIQRLASLNVHAA
                     IIGKAAHQASFWEGLK"
     gene            27131..27889
                     /gene="hisF"
                     /locus_tag="O7798_000648"
     CDS             27131..27889
                     /gene="hisF"
                     /locus_tag="O7798_000648"
                     /EC_number="4.1.3.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000592599.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="imidazole glycerol phosphate synthase subunit
                     HisF"
                     /protein_id="HDC2862921.1"
                     /translation="MIKKRIIPCLDVKDGRVVKGIQFKGLRDIGNPVDLAMYYNEAGA
                     DELVFLDISKTEEGHSLMLEVIEQTASRLFIPLTVGGGIQSLDDITQLLNHGADKVSL
                     NSSALKNPQLIKQASDKFGRQCICIAIDSYYDPERKAHYCCTTGGKKMTNIKVYDWVQ
                     QVEQLGAGELLVTSMGHDGMKQGFDIEHLANIKSLVNIPIIASGGGGNAQHFVELFDQ
                     TDVSAGLAASILHDRETTVQSIKEVIRQGGIAVR"
     gene            27886..28463
                     /locus_tag="O7798_000649"
                     /pseudo
     CDS             27886..28463
                     /locus_tag="O7798_000649"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000170495.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional phosphoribosyl-AMP
                     cyclohydrolase/phosphoribosyl-ATP diphosphatase HisIE"
     gene            28656..28835
                     /locus_tag="O7798_000650"
     CDS             28656..28835
                     /locus_tag="O7798_000650"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000837587.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDC2862922.1"
                     /translation="MKSKLSNSGIDVTVKDVEKYMNRYNEVMKGKNGEKAKELCLSLL
                     PINIIVVFTFFVFIL"
     gene            29556..31598
                     /gene="lip1"
                     /locus_tag="O7798_000651"
     CDS             29556..31598
                     /gene="lip1"
                     /locus_tag="O7798_000651"
                     /EC_number="3.1.1.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501455.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YSIRK domain-containing triacylglycerol lipase
                     Lip1"
                     /protein_id="HDC2862923.1"
                     /translation="MKSQNKYSIRKFSVGASSILIATLLFLSGGQAQAAEKQVNMGNS
                     QEDTVTAQSIGDQQTRENANYQRENGVDEQQHTENLTKNLHNDKTISEENHRKTDDLN
                     KDQLKDDKKSSLNNKNIQRDTTKNNNANPSDVNQGLEQAINDGKQSKVASQQQSKEAD
                     NSQDSNANNNLPSQSRIKEAPSLNKLDQTSQREIVNETEIEKVQPQQNNQANDKITNY
                     NFNNEQEVKPQKDEKTLSVSDLKNNQKSPVEPTKDNDKKNGLNLLKSSAVATLPNKGT
                     KELTAKAKDDQTNKVAKQGQYKNQDPIVLVHGFNGFTDDINPSVLAHYWGGNKMNIRQ
                     DLEENGYKAYEASISAFGSNYDRAVELYYYIKGGRVDYGAAHAAKYGHERYGKTYEGI
                     YKDWKPGQKVHLVGHSMGGQTIRQLEELLRNGNREEIEYQKKHGGEISPLFKGNHDNM
                     ISSITTLGTPHNGTHASDLAGNEALVRQIVFDIGKMFGNKNSRVDFGLAQWGLKQKPN
                     ESYIDYVKRVKQSNLWKSKDNGFYDLTREGATDLNRKTSLNPNIVYKTYTGEATHKAL
                     NSDRQKADLNMFFPFVITGNLIGKATEKEWRENDGLVSVISSQHPFNQAYTKATDKIQ
                     KGIWQVTPTKHDWDHVDFVGQDSSDTVRTREELQDFWHHLADDLVKTEKLTDTKQA"
     gene            complement(31989..33041)
                     /gene="icaC"
                     /locus_tag="O7798_000652"
     CDS             complement(31989..33041)
                     /gene="icaC"
                     /locus_tag="O7798_000652"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501454.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polysaccharide intercellular adhesin
                     biosynthesis/export protein IcaC"
                     /protein_id="HDC2862924.1"
                     /translation="MKKIRLELVYLRAIICAIIIITHLLTQITLKHENMEGGSLVLQF
                     YIRNIVIFGTPCFIILSQLLTTLNYQKVTYRYLTTRVKYILIPYILMGLFYSYSESLL
                     TDSSFNKQFIENVLLGQWYGYFIVVIMQFFILSYIIFKINYNLFNSKILLLLSFILQQ
                     SFLYYFTNNTAFHDTVLHYYPLSENTIIFGWIFYFFLGAYMGYNYERVLNFLERYLVI
                     MIVLAVATYFVFIALANGDYWNVTSFSYSLTPYNSIMFIVILGICTHFKTMLFNTIQM
                     ISAFSFFIYLLHPIILDSLFAYTNIFEDNTMVFLAISLLFILGLCIGVGMILREFYIF
                     RFIIGKQPYKLNINAY"
     gene            complement(33028..33900)
                     /gene="icaB"
                     /locus_tag="O7798_000653"
     CDS             complement(33028..33900)
                     /gene="icaB"
                     /locus_tag="O7798_000653"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501453.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="intercellular adhesin biosynthesis
                     polysaccharide N-deacetylase"
                     /protein_id="HDC2862925.1"
                     /translation="MKYRKFIILVLSILIILPVSTLDGHHIANADDDSPKKLKYKENS
                     ALALNYHRVRKANFLNNFIYFFSSSKEIKNYSVSQSQFESQIKWLKSHDAKFLTLKEF
                     LYYKKKGKFPKRSVWINFDDMDETIYENAYPILKKYKIPATGFIITGHVGEENFHNLD
                     MISKKELKEMYKTGLWEFETHTHDLHNLSKNNKSKLMKASEATIIKDLNKSEKYLTKN
                     FKKSQKTIAYPYGLMNDDKLPVIKKAGLKYGFSLEEKAVTPNSNDYYIPRILISDDAF
                     EHLIKRWDGFHEKD"
BASE COUNT        11927 a         5127 c         6064 g        10835 t
ORIGIN      
        1 ttaaatcaat taatagttat actgcattgc ttaaaatcaa aatatctaat gaagcatctt
       61 ttaatcgtaa gtgttaaatg gttttcttaa tcaatttgtt tgaatgtaca aaagcaatta
      121 aagcaaaagt aatgtaaatg agggtgtata caacaattac tacaataacc ggcatgaagg
      181 aaatattacc catcaatttc ataaatgcta ttgcggcgaa tactgcatgt aatatagcaa
      241 tcaataatgg taaaccgaag ttgaaagtaa tttttaataa taatccctta agcatatctg
      301 tatgcgtaaa gcctatgcgt tttaatattc tgaagttact tagttcatcc tcagtttcat
      361 ccatttgttt aatataaata atacatccag ctgctactaa aaatgctaat cctaaaaatg
      421 atgtaacaaa tattagaata ccgttagtag catcgacctc ttttttcatt tcatcatacg
      481 tgatgacttt gtctccaaac tgttttgcaa ttgcttgagc tttttccttt tgtgatgttt
      541 gtttaatatc atatccataa aaagtatgaa cgttattttg tgttttcaac tgctgatact
      601 tttcaggact tacttcgatg acaggtgagt tgaagcttag atttaaagga taaaccttac
      661 ctttgtcttc ttgtgtaaca cggaaagttt cattcttagt accttttact actaaatctt
      721 tgtttaaatg gatattaata atgttaggca gcgattttgt atttgtaatg atggcattgt
      781 tgcctgttaa cttgttattt gcacttaaaa tagaattcgt gcgacctgaa tcactaccat
      841 tttccaaagt aataacctga tcattaacat tatctacagt aatagtttcg taagcatttt
      901 tagaaaatgt aatttgttgt tggcttagtt tagtttcaaa ttgtttagca tcttgagtag
      961 cgaccacgtt aaattcattt ggtgccatag atgtaagggt ttgatctgta tttgatttag
     1021 ataatgccgc aaaacacaat acagttactg taactgcaga aataattgca atgatagtta
     1081 aagacatggc atttttcttc attctgtaca taatagacga tgtgaataca acatcggtaa
     1141 tagatacgcg tccatttttt gattttttca atgttttaaa aataagtgac acggaacttc
     1201 tgaagaataa ataggcgcct acaaccgtta aaaataaaat gataaacggt gatgtcatag
     1261 ccatagttag tgctttgaac gtaccaaaca tttctgtcgc catataatag cctagtgcaa
     1321 tcatagcaat acctaatacg cctgaaataa cctctgcagt cgttacttta gcagttgtgg
     1381 catcagtttt aattgaatct ttcatcattg ataagatact acgtcttttt agaaataaag
     1441 cactttgaaa taaaatcagt acatacgcaa taattagcat gaaaatagtt aaaacaaggg
     1501 ccataggttc gaaatgtatc gataagttaa tcgataacga catcaattta gatactatgg
     1561 aaagcaataa ttgtgcacct gcaatgccac ataatacacc gacaacacct gtgattaaaa
     1621 atacgatcat ttgttcaagt gctaacattt tcaaaatgtt ttgtcgtgtt aaaccaatca
     1681 actgaaatag cgcaaattca cgtgtacggc gttttacgaa taaatgattg gcatacatta
     1741 aaaagatgac aataatgata aataaaaata ttgatccgac taaagcacct ttcttaatga
     1801 tggccatcga gtcgtcatta tttacacctt tagtaaactg taaggttgta aaactgaaat
     1861 ataagacgat gctaaaaaat aatgaaaata aatacattgc ataatgtttt aagttttgtc
     1921 gtaagttttt gaaaacgata tggttaaatg tcatttgaga caccacctaa tactgattga
     1981 agatgtacaa tgtcttcata aaaggcctgt ttagaacgtc cttcctgata aagttgtgta
     2041 tgaatttggc catcttttag catgatgaca cgttctgcaa aacttgctgc aaccggatca
     2101 tgtgtaacca tgacaatagt tgtatcaaac gatttattca tttcttccaa acgttgtaat
     2161 aggtcatttg cacttttcga gtcgagtgcg cctgttggct catctgcaaa tatgatttgt
     2221 ggtttgtgaa caaatgctct cgctgctgca gttctttgtt gttgaccacc agataattcg
     2281 ctagggtatt tatttcctag gtcataaata cctaatgctg tcgtgatcgc tttataattt
     2341 tcttccattg ttgccttcga cattttttga acagataaag gtaacataat gttttcttta
     2401 acggttaatg tcggcagaat actgtaatct tggaagatga aacctaatga ttctttgcgg
     2461 aatttggcaa gtgctttttg attaagttta ttaagctctt gtccgttagc aatcacgcta
     2521 ccgctagaaa tttggtcaat tgaacttagt acatttaata aggttgtctt acctgatcca
     2581 gaaggcccca taatcgcaac gaattcgcct ttttgtatgt caaagttaat atctttaagt
     2641 gcttgaaatg tgtgcttttt accgtatgtt tttgaaacat gttgcactga taatatcgtc
     2701 atagtctcac tccttttgta tttaatttca ttttaaataa tgtttggagt agtagccttt
     2761 atctaaactt acaattcaat gaatgaacct tacagagttg aaagctatcg ctacttagta
     2821 gatttttgag tgaggataca gattcatcgt acatattaga caaaagcaat ggtgctttct
     2881 aagtgatgat gtttgtgtaa attgagaaaa gggaatttaa ttattgtata ataaattttt
     2941 tgtaaaaatt aaaagagggt tttatttgaa aggaattgat tgttatggaa aaaggaaatc
     3001 aaggtattaa atggtctagt ttaataatgg gtgtattatt attaatgttg gcagtcgtta
     3061 tttttacatt tccaattgaa aatttttatg ctattacctg gttgattgga ctgtttgtat
     3121 taattaacgg tgtgattcaa atcgtttacc gtagaaaagc aaaagcttta gtaggtggta
     3181 accaaaattg gattctgttt atggggattg tagatattct atttggtcta ttagttattt
     3241 ttaatgttgg cgcaagttca gcattcttta tttatatgtt tgctttttgg tttattttta
     3301 gttctatctc tggattattt acgttttcgg gtagtggtag cttaaaacta atttcagtga
     3361 tttttaattt attaggtatt gttttcggtg tcattttatt atttaatcca ttaatgggta
     3421 tcgtctttat ttcgacgatg attgctattg catttgtatt cgtaggtgtc atttatgttg
     3481 tagatgcact tgcttaagta aaatgaagcg gttcaaaaga agggtgtgac atgaagtttg
     3541 tgtcatatcc tttttgttgt gtttatgaag cataaaaaag gggcgctacc tacaataagt
     3601 aagatacgcc catattttta tattttacta ttattgtttt tcaatacgat taatagttac
     3661 atttagtcca aaatattttt ctaaaaaatg tttatagtta tctttagtga catcaaattt
     3721 ttctgagcta ccattccttg ttaaagttaa atgattttca gacattgtag cacggccaaa
     3781 tgattgtggc attgtaatta ataaatgctg tacaaatatt gaatctggat gcgtttgatt
     3841 atattcgatg ttgctattaa aatcttctat ttgtttaggt ttgaattcag cttcatattt
     3901 tgtatgccaa tgatcatttt cgaatttttg aacatagaaa atatccttgt cttcgttgtt
     3961 aaaaatagcg cggaatgtac cactgatatc agtaattggt tgtgtatgct cagatgaagt
     4021 aataggaatg gcatgtagag gtaagtctcc aaagccaaca tcagttacat agaatacatc
     4081 atttatagaa acaacaagtg aagcatgtga accgttcaga ctacgaccgc caccgggtgt
     4141 gtgaatagta gctgacatta attcaggatt aaatcctttt tgttgtaaat aggctttgaa
     4201 aaatgtattt aattcataac aaaaaccacc acgtttatca tgaacaattt tattaaaaag
     4261 tgcatcgata tttatagata tcggcttact attttgaaca tcaatatttt caaaaggtac
     4321 agttaacata aaacgtgttg cataataatt taatgcttca atactcggtc gattataacg
     4381 agatgaatca atttgtaaat aattctctaa cttcgcaata ttcataagca tagcgcctcc
     4441 tgtattaaag attataatta aattttaaac agaaatactg aaattttaaa ttcgaaagca
     4501 ttgaattttg gataaataca ttttaaatag aaaaatacgc tctcaaaatg aagtcatctc
     4561 taaaagaaac gatttaaaga tgactactga gagcgtagca taatggaaga agtgtgcagg
     4621 gtgtctaaaa atgcaacaat acaaaggtag ttgcaagaca agttgcctta tctagaccat
     4681 ttgtgttcta tgcgaccaaa cttccaaatt aaacttgaaa taagccaagt aattaaaaat
     4741 aatgcaacta aaatatagcc taaataatca aattcgatcg aaccaatgaa tgctcaaaac
     4801 gcaccatgta aatctaactt atcagcaaga atttgtagca attcaatcat cccaatcact
     4861 aatgctgcca tgactgatat cgcagtaatc gttatattgt aatagatttt gcgaatagga
     4921 ttgaagaatg cccaattata ggcatacttc attacaacac catctaatgt atccaataaa
     4981 ctcatacctg atgcgaataa aattggtaaa gataagattc cgataaatga aatggcttgt
     5041 tgtgatgcgc ctgaagaaag agcgagtaac gcaatttcac tagctgtatc aaaaccaagt
     5101 ccaaataaaa agccaagtgg caatacgtgc caactacgcg tgattaattt gaaataaggt
     5161 cctacaaatc gagaaaccaa tcctctagat tcaagtaatg catcgacttc agcttcttca
     5221 atgtgttcac gacgtaattt agcgaacaag ttaattaaag agattaaaat aattagattc
     5281 aacacaccga taagcactaa aaagaaacct gaaactagtg taccaatcgt tccaccaata
     5341 tcttggaaat gcggtaattc atctttagcc cattttacag atacccctaa aaaaacagcc
     5401 attaaaaata cgacagatga atgtccaatt gaaaaataga aacccacacc agatggatct
     5461 ttgcgttgct gtaataattt gcgaaccgta ttatctattg cagcaatgtg atctgcatca
     5521 aatgcatgac gcaaacctaa tgtatatgca agaatcccca taccaaataa gatatgatgg
     5581 tcttttccag caatccataa aaaactaaac ccaataacgt gtaacaaaat gacaatagct
     5641 atgtatggta accagcttaa gcgctcattt ttaaaaacag tcaaaatata tccttctttc
     5701 ataacatgat atttaatcat actgtatgtt caatgggcac tctagtaata agtgttcata
     5761 taacaaaaat gttatgccaa attatttgtt atataaaaat atacatgtaa ccacaaaaga
     5821 ttttttgcga tatatataat ttgataaatt aaccaacaac aatgtaagat gtcactttgc
     5881 ttaacttggc atccttttta tgattttcaa attcaaaaaa atgagcaaaa tgaatctctt
     5941 taccagtttt taatatttca ataccatgca tggaacctaa gcacccatgt gtgatgctgg
     6001 aatggatatt gagactagca acctgattgt aatgattaga tagttcttga attaatattt
     6061 gaggtccgta tatgtcaaag cggccaggga cagaccaaat aaattctgtt gtaaccagtg
     6121 aacgtaataa ttcaatatct aatgctgctg taacaactat aaaatctatc atttgttgac
     6181 gtttaggcgc atgattgcat gacacatctc ctgttaactt aaaaggtaat gatgactgaa
     6241 cttccgtttt aaaatgtagt tggtgctgaa ataaagcttg ttccaatatt gatatagctt
     6301 taggaccaac gccatgcatc tccattagag atgacttcgt atattgtgat actgcttcta
     6361 atgtgtatat accttgtgaa tttagcgcgc gtgttgcagg ctttccaatt ttaggtaaag
     6421 tcatttgtat ccatccttta tgttgtatgg tagtctttct ggcaatatac cctgatttgt
     6481 acagaattat ttataaaatt aatattgttt agtggttggt gaataaatgt gggaaatata
     6541 aacaaaatga tatctttatc gaaatattat tagtaaaatc gttatattag cataaccaag
     6601 tgagcgtatg cagtaaatta aaaattagga aagtaaggag gtttgaaggt gaattcagag
     6661 tataaaaaag gcatattttt agcactcagt gcatacattc tgtggggaat actacctata
     6721 tattggcagt tcgttgatgc aataggcgca tttgaaattt tagcctttcg tattatattt
     6781 tcagcaatat tcatgatttt catactcgcg gttggacaaa aacaacgcaa tgcatttcaa
     6841 cgagatatga atcaattgtt aggcaagccc attcagctat tagcgattgt cgtagcaggc
     6901 tatgtcatta cattaaattg gggtacattt atttgggctg taacgaacgg tcacgtccta
     6961 caaacaagtt taggttatta tataaatcca cttgttagca ttttgctcgc acttatcttt
     7021 ttaaaagaaa gattcaataa atttgaatgg ctagccattt tattcgcatt catcggtgta
     7081 ttatatatga cgctcaagat tggagaattc ccaatcgtct ctattatatt agcgttatcc
     7141 tttggtacat acggattatt gaaaaaagta gtacatattg atgccatcag cagtattacg
     7201 attgaatgta ttgttaccgc acctgctgga ctaatatacg ttatttattt atggcagcaa
     7261 catcagatgt catttggatt gaacatgtca tcattttggt tgttattttc tggtgctatt
     7321 acggcaatac cactaatcct attctcagcc ggggcaaaac gtattccact ttcgctaata
     7381 ggatttattc aatacgttgg accaacaata atgtttgtac tcggcatatt tgttttcaaa
     7441 gagcctttta gtatagatca attaattacg tttatattta tttggacagg tattgtgtta
     7501 tatagtcttt ctcaatacat taaattgaag aaacatccgg tcgcaaaaac cctataaaat
     7561 acgaggaaag ataattatac gtgttttcaa tatcctttgt gtcatgatga ggtgagactg
     7621 aggtatgtgt gcagtaacag tgacagacgt ataaatttga aacattaaat atgaaataag
     7681 gcactttcgt tgaattcgca attaaaatga atttaaacga aggtgttttt tgtatgatga
     7741 tttatgaggg catacgtaat gttaatcaat gaagcggaat agtatagaaa tgtattttat
     7801 gtgatgttac gtaatgactt aaatctttat acaaattttc agtgaagcac gcaatgattt
     7861 aaaggataaa cgtattttaa aaagggagtc ttgatttagc aaaggttgat tttaaataca
     7921 aattaaaaag cgcccaaatc aatgagattc gagcgctaat ttaaatattt taaaatatac
     7981 caattacttt catccaaagt gatcctaaac caatccagat aataaagtag acgaaaccta
     8041 atattaagtt cattgtccac caacgttttt gagtcacgta acctgaagag aatagaatcg
     8101 gcgctggacc actactatag tgtgttgttg aagctaatag gttaccgaag aaacctaaca
     8161 ttaatgcact gaataatggt ggtgcaccgg ctgcgatggc aacgcctagt aatgctgcat
     8221 acatcgcact gatatgtgct gtagaacttg caaataagta atgtgaatag aagtagaaca
     8281 atattaaaat gaccaggact ataggccagc ttaagccacc aagacttgta gcaatggatt
     8341 tacttaacca aggaataaat ccaagcttgt ttaattggtc ggccattaac actaatactg
     8401 agaaccatac taatgtgttc caagcacctg tttcgtttaa aatgtcttgc catgttaaga
     8461 cgcctgtcaa taataacaat gctagcgcaa taaaggccgt taaagttgca tcaatatgaa
     8521 tgaaacttcc gacaatccat agtgttaacg caacgacaaa aataccaatc ataaattttt
     8581 cagctaaagc gattttaccc atagtcgcta attcattttc agcccaactc ttagcatttg
     8641 gtgtttcttt aacagttggt ggataaattt tataaataat aaaaggtaca acaattaagg
     8701 aaacaagtcc aggaactaaa gcagctagaa accaattcat ccatgtaatg tgaacattag
     8761 atgtgctaga tgctaaattt tgtgcaaggg ggttaccggc cattgcagtt aaaaacatag
     8821 ccgcagtaat taaattacct tggaattctg tgaaaacaag aaatgcaccc attttgcgtg
     8881 ctgatccgtc tttcggtttc gaaccaaatg attcagaaag tgatttgata attgggaaca
     8941 tgattccacc agcacgcgcg gtattacttg gtgtagcagg cgctagaatt aaatctacac
     9001 cgacgataga atatgctaat cctaatgttt ttttaccaaa taatttgacg aaatgaagtg
     9061 cgatacgtct accaagacct gttttcacaa atcctctcga aatgaaaaat gccatagcaa
     9121 ttaaccaaat gctattatta ccaaaaccag cgacagccgt tttcatgtca acaatgccaa
     9181 cgagtaccat gattgtaaat ccaattatag agacggcccc aattggcatc ggttgtgtaa
     9241 tacaagcaat gattgtcgcg acgaatattg cgaacatata ccatgctgtt ggatccacag
     9301 catccggttt aaaaggtgta agtgcccaaa taaggagacc tacaacgata gggagtataa
     9361 acttacgata tttaaccgtg ttttccatgt taaaacgtcc ttctttctat gttttataca
     9421 tatttcaatt taagaataaa gctaactaca aaagatgtac agtaataatt aaatataaaa
     9481 ttaaattaac gaaatcatta atataattat ttttcgagaa tcggtgaaga actggtatag
     9541 atggtgttta ttaaattcaa aaaagtgacc ttttaaacaa ataaaaaacc cgttaacgtg
     9601 ttgttaacgg ttaataagca catatttatt ttaaattttt taatatacga gacatctctt
     9661 caattttacc agcatgaagt gggatgtgaa tggcatttaa tactaataac tcttctaagt
     9721 tattacaacc gacaattggc tgtttcaatt caattgctaa atcatcttca gttagatttc
     9781 gtgcacgttc aggtaaagtt tggagacctt ctaaaatcct ttcaatactc ggtacttcat
     9841 ccttccattc atctggagac gaaccatttc cgaataaagg tctatagata tttaaatcaa
     9901 tattctcttt accagcaaca gctaaggccg attcaaaaat tgttaataca tgaccaaatt
     9961 gccaatgaat ggtattagaa aaaggcttat gataatcatc aagtaccttt tcaactttcc
    10021 aagcatcata cacatttact aaatatccta accccatatc aatgacatca aatactgttt
    10081 ttgtagtcat tattaattcc tcccccataa ataaaatata cttccgtaag tattacccta
    10141 ttaacaaagt tgttagtcat ttaaggaatg tgtacaacaa ctaccttaca ataaaagata
    10201 gttgacgaaa agttctcaat gtactatctt attatgtaag atagtaggtg attaaaatgt
    10261 cagtgtcaga tcagattatg aaaggtctct tagatggggc gatattaggt ctcattgccc
    10321 aaggcgaaac gtatggatat gaaattatga cgaaacttaa gaatcaagag tttccagaga
    10381 taagtgaggg tagtatttat ccagttttaa tgcgtttaaa caaaaaagga tacgttgata
    10441 cgacaataaa aaaatctagt aatggcggcc cgaggcggaa atactatacg attaccgatt
    10501 caggtttaaa ggaactaaaa gtatttaaat cgaaatggca agttttgaat aaagggatga
    10561 ttaacttgtt tggaggggaa aacgatgtta agtaaacaat ctcaagattt tttagaaaaa
    10621 ttacgtgttg aattgttatt tagaggtaag actgaagcag aagtagaaga gttattggaa
    10681 gagctcgaag atcatttaac tatggctgaa aaaaataacg aagatacaag ttcaattatt
    10741 aatacaccga ttaagtcaat ggctgatcaa ttatcacctg agataagtct tactaccggt
    10801 ttgtataaat atattacttt gtacttcgct tttattttag cagtcattat aattcctagg
    10861 tttttagatt tgggtacatt tgatgtgaca attgcatttt tactttatat agctagtatc
    10921 gttattttag gtgttgtcat tggtatgctg attctacgaa atacattagt ccgatttggt
    10981 gaccaaaaaa taacgtatgt tataaatgtg acttatggaa ttatcgtatt tttatggatg
    11041 attttaggtg gcttgattat taaaaaatat cctatctata gtttctttga gttaagtgac
    11101 aaacagagtt tcatcgttgg gttagtactt ttaattgcgc tcattggaac ttgtatttta
    11161 attaaacaga aaatttatgc gctcatcgtg ttggtaattt cattgccaag tttgatagca
    11221 aggatagcag ctatctttag taaagaacca gacactttta atttagtttc agtaagtata
    11281 ctcatcattc taaatatagc atttattatt tatacatttg taaattttag gaagttaaaa
    11341 aaagaagact aaacaatgtc gtttagctaa aatacatcat tatagtaaaa ctgtatacca
    11401 atcatccaaa agcaccctaa agttagactt aaactaacaa attagggtgc ttttgtttgt
    11461 gcacttataa ctattccgtt gtgcccaggg ctaggtgtaa atcctcatca ttagaaatag
    11521 cttcaatggc tgcagtcaaa cctgcaacta tcttttctaa tggcatagat ggtgtatcgg
    11581 gtttaccaat gacctgctct ggtatgtatg gcacatgaat aaatccgaat cgtaggtgag
    11641 ggtaatgctt atcttgtaaa taacctaagt gataaagtgt gtgattacaa acaaatgtac
    11701 ctgcgctatt tgaaagtgct ccaggaagtc cttgattaat aatactttga gtcattgctt
    11761 taactggtaa atttgaaaaa taagctggcg caccgtctaa gtgaatggct tgatcaatag
    11821 gttgaaaatc atcattatct ggaatacgtg catcatcaat attaatggcg acacgttctg
    11881 gggtaatggc atttctacca ccagcttgtc ctatagctag tacaacatca taatgattag
    11941 atgccaacgt tttatttata atattatcta ctttcttaaa agaggttggt agttttaatt
    12001 tatcgattgt atgtgtgcca ataatatctt ctagttgagt cacagcttcc catgagggat
    12061 tgatattttg attgtcaaaa ggcgcaaacc ctgttactaa aatgtgcatt ttaagacacc
    12121 ccgcagtatt aaaatttaat ttagtataac acgcgcataa ttaaaaacat atcaggttat
    12181 gtatgcgcat aaaaaacagc cttgaaaaac ctttataaat cggattttca aagcgtgttt
    12241 tgaaaggtat ttaattaaaa ctaagcatgt tgatgtaaat catcaaagtt tgttaaacgt
    12301 tgttgccact cattatcact aatattattt gcttgaacat aacgattacg ctcatgttta
    12361 gcacattcat aagagcatgc acctaaatat ttagtttcgt tttcttcaga aactaatatt
    12421 tgtttattac attctgggtt agcgcaatta atataacgtt cacatggttt gccatcaaac
    12481 caatccttac caataattgt tttttcaact tggttgatat caacactgat acggtcatca
    12541 aatacgtaca ttttaccgtc ccaatattca ccttttgttt caggatcttt accatatgta
    12601 gcaataccgc catgaagttg agctacatct tcgaaacctt cttttaaaag ccatccagaa
    12661 aatttttcgc atcgaatgcc accagtacag tacgtaacca cttttttatc tgcaaataac
    12721 gctttattct ctttaatcca gtcaggcaaa tctctaaaac gtgtgatatt tggacgaatt
    12781 gcacctcgga aatgacctaa atcaaattca taatcattac gtgcatcaat aatgactgtg
    12841 tcatcatctt caagagcttt tctaaattct acaggtgata aatattggcc agttgtgtgt
    12901 cttggatcga tgtcatcttc taaatctaaa gcaacgattt cttttcgagg acgtacatgc
    12961 attttcttaa aagcatgtcc ttcagcttca tcaattttaa acaccatatc tttgaatcgt
    13021 tcatcggcat gcatatgtgc catatattgt tcggtttctt cttttgtacc agataatgtg
    13081 ccgttaatac cttctgtaga aacaagaatt ctacctttta aatggtgtgc tttacaaaag
    13141 gctaagtgat cctgagcaaa ctgttcaggg tcatcaatcg tcatatattt ataatataaa
    13201 agaacttgat agttcatagg ttaatctcct tctataaaca tgttataagc atgttaattt
    13261 ttaaaataaa gcgtcaatac gcatatttgt ctacgtccat cattttaaca gagttgtatt
    13321 gtcattcaat atttctagct tgaaatcagc cactagaccg ataaaataga tagatgaaac
    13381 cgttatcatt ttatttgata gttatcttgt ttaaaataaa attgatagtt aaaacgaatg
    13441 aaatgaaagg aatgatcatg atgtcacaac aagatttacc tacattattt tatagcggga
    13501 agtccaatag tgctgttcca attatatctg aaagtgaatt acaaacaatt acagctgaac
    13561 catggcttga aatttccaaa aaaggattgc aactagaagg attgaacttt gatcggcagg
    13621 gacaactctt tttattggat gtattcgaag gcaatatttt caaaatcaat cctgaaacga
    13681 aggaaatcaa acgacctttt gtaagtcaca aagcgaatcc tgcagcaatc aaaatacata
    13741 aagatggccg attattcgtt tgttatttag gagattttaa atctacagga ggcatttttg
    13801 cagctacaga aaatggtgac aacttacaag atattattga agatctttca acagcatatt
    13861 gtattgatga catggtattt gattctaaag gtggatttta ttttacagat tttagaggat
    13921 actctaccaa tccactagga ggcgtttatt atgtttcgcc ggactttaga acagtgacgc
    13981 ctatcattca aaatattagc gtagcaaatg gtattgcttt aagtacagat gaaaaagtac
    14041 tatgggtaac agaaacaaca gccaatcgat tacatcgcat tgcacttgaa gatgatggtg
    14101 tgacgataca accatttgga gctaccatac cgtactattt tacaggtcat gaaggaccag
    14161 actcatgttg tattgatagt gacgataatt tatacgtagc aatgtatggt caaggtcgag
    14221 tgttagtttt taataaaagg ggttatccaa taggacaaat attgatacca ggccgagatg
    14281 aagggcatat gttacgttct actcatccgc aatttatacc tggaacaaat caactcatca
    14341 tttgttccaa tgatatagaa atgggcggag gatctatgct ttatacagtt aatggctttg
    14401 caaaaggtca tcaaagtttt cagtttcaat aagacctacc tgaatgaaag gcgtctaaaa
    14461 ttagggtgaa cagttagtgc ttgttacaca tgagttaaac gaaaaatgcc aactatacct
    14521 agggatgata tagttggcat ttcgtatata tattaaaaca atgaggattg tgtaatgaga
    14581 ttattctgag attgagaatt cagctgatgc ttcgaattta acatctttgc ctagcattac
    14641 gccaccagtt tcaagtgctt ggttaaagtt aatgccatat ttttctctat tgattgtacc
    14701 agtaacaata atacctgtta cttgagaacc atccatagga ttcttactta ctccgttgaa
    14761 ttcaacatcg aatgtttctt cgttagtgat gcctttaatt gttaaatcac caacaacttt
    14821 gctttcagat actgattttg tcacaaatgt aattttatca aattcgtcag taccaaagaa
    14881 atcaccagat tttaagtggt tatcacgtgc ttcgttttta gtgttaattg agcttggaat
    14941 aattgttgca gtagctttca aagtactgaa gtcattaata tctccttcaa cagctacatc
    15001 aaattgatca aatgaacctt tcactttaga aaccattaaa tgtttaattt ggaattctaa
    15061 actactgtgt gcaccatcaa aagtaaagtt agtcataata taaaacctcc atatttttat
    15121 ctcttagata tattttttat acttgatata catacaatac cacctaaaaa acaaagatgc
    15181 aagcatttta tttcgaattc gaatattttc tgtgatgtat ttaaagaatg acctataaaa
    15241 caccacacta ttgttatacc ctagtcaatt aattcaaaca taaagaagtg attacaagtc
    15301 cgtgaaattt agttaatgag ataaatctga ctattattat catttttata gtcactacta
    15361 ttgactttgc atcaagtgac tcgtactatt ttaatataat tctgaaaatt caaaatatag
    15421 aacattaaat atgtagataa tatttttttg aagttttaaa aaaaggaggc attttatggg
    15481 aaattatttg gtattgcaat cagattttgg acttagtgat ggcgctgtaa gtgcaatgta
    15541 tggagttgca tatactgtaa gtgatgatat acgtgttgaa aacttaacgc atgatatacc
    15601 accgtatgac atttgggtag cgtcatatcg tttatatcaa actgtaaaat actggcctaa
    15661 aggcacagtt tttgtatcag tggtagaccc gggtgtaggt agtgataggc ggagcattgc
    15721 ttgcttaaca tattcaggtc attacattat tacacctgat aatggttctt taagtcatat
    15781 taaacattac gaaggtatta aaaaagttat cgaaattgat gaagtgaaaa gccgattgcc
    15841 tcattcggaa gaaagtcata cttttcatgg tagagatgtt tatgcataca atggtgcgag
    15901 attagctgca aataagatag cgtttgaacg tctcggtcag gcaattaatg ttgatagtat
    15961 tgaggcatta gaaataagag aagtgacaaa aaatgaggat tctgttacag gaagcattga
    16021 tattttagat atcagatttg ggtcattatg gacaaatatt ccattggcat tcttaaaatc
    16081 cttggaaatt gttcatggta ataatttggt ggtaacaatt tatcatcaag ataagaaagt
    16141 ctatcaaaat attattaaat ttgcgcgatc gtttgcagat gttaatgtgg gtgaacctct
    16201 tgtgtatgtt aactcgctag taaatattgg tgtagcagtc aatcaagact cattttcaga
    16261 tttatatcat attggtactg gaaatgattg gacgattcat ttatctaaag caccatcaat
    16321 ataatgaatt ttttatgtaa ggagtaatga agatgaaaaa acaagatatt tcagttaaaa
    16381 ctgttgttgc aattggtata ggagcagcgg tatttgtaat tttagggcgt tttgttgtaa
    16441 taccaacagg ttttcctaat acgaatatag aaacatcata tgcattttta gcattaatat
    16501 ctgcaatatt tggacctttt gctggtttaa tgactggatt agttggacat gctattaaag
    16561 attttacgac atacggtagt gcctggtgga gttgggttat ttgctcggga attataggct
    16621 gtttatatgg ctggattgga ctaaaattaa atctttcttc aggccgattt tctaggaaat
    16681 cgatggttta ttttaatatc ggtcaaatta ttgcgaatat tatttgctgg gcacttattg
    16741 caccaacatt agatattttg atttataacg aaccagctaa caaggtttat acacaaggtg
    16801 ttatctctgc agtattaaat attatttcag ttggcattat tgggacaata ttattaaaag
    16861 catatgcttc atctcaaatt aaaaaaggta gtttacgtaa ggaatagtta ttttgttgaa
    16921 tcagatatgt aaatgaatat agaaaggtaa tgatatatca tgactgaacc aattatctcg
    16981 ttcaaagact ttagttttca atatcatagt caagcagcac ctacattaca gaatataaat
    17041 gttgatattt atccaggaga aaaagtatta gtagttggtg cttcgggtag tggtaaatcg
    17101 acttttgcaa attgcataaa cggattaatt ccatttaaaa ctaaaggtaa cataactggg
    17161 gaactatata taaataatca agatgcaacc gttagttgtt tacatgatag atctaatgtt
    17221 gttggtacag ttttacaaga tacagatgga cagttcatag gcttaacagc agctgaagat
    17281 atggcctttt tattagaaaa taattgtgtt gaacaagatg atatgaagaa aaatgtaagt
    17341 tattgggctg aaaaagttgg catgatagaa catttaaatc accgaccgca agatttatct
    17401 ggaggtcaaa aacaacgcgt ttcattaggt ggtatattaa tccatcgtac gcctatttta
    17461 atattggatg agccactggc caatttagat cctgcgacag gacatgaaac gctgagattg
    17521 ttaaacaata ttcatgaaga aacaaagtca acgatgatta ttgtcgaaca tcgattagaa
    17581 gaatcattag atgatacgtt tgatagagtt cttcttttta aagatggaaa aatcatcgct
    17641 aatacaacgc ctagtgattt gctaaaatca tctaagctta aagaagcagg catacgtgaa
    17701 ccattatact gtacagcgct taaatatgca gaagtagatg tcgaatccat tgataactta
    17761 gcgaatttac gtgacgtttg tatgagtgaa catgttaaat ttaaagtgaa aaaatggata
    17821 gatgaaacat ctgcaaataa tgataataag tacaaatctg aaccgctatt agaattaaat
    17881 gaggtatgtg ttcaatatag tgactatagt aatagtgtac ttaataatgt tcaattaaat
    17941 gtttatagaa gagaaatgct tagtatagtt ggtcacaatg gtgccggcaa atcaacactt
    18001 gctaaagcaa tttgtggatt tttagatata acaggtaata tccaattttg taatagggga
    18061 tttaatcaat tgtcaattag cgaacgatct gaattcgtag gttatgtgat gcaaaatcca
    18121 aatcatatga tttctgaaaa aatgatttac gatgaagtag cattagggtt aagagcacga
    18181 ggtatgaaag aatcagatat aaagatacga gtagagaatg tgctcaaaat atgcggactt
    18241 tatgcatttc ggaattggcc aattgcagct ttaagctatg gtcaaaaaaa gagggtcact
    18301 atagcatctg ttttagtctt aaatccggaa ataatcatat tggatgaacc gactgctggt
    18361 caagatttct atcattataa tgagataatg tcatttttaa ttgaactaaa cagacagggg
    18421 aagacgatta ttatgattac gcatgatatg catttattgt ctgagtatag ttcaagaaca
    18481 gttgtattat caaaaggtca agtcgttgct gataccacgc cagtattggt tttaaatgat
    18541 aaaaaaatct gtgagattgc atcattgaga caaacatcgc tatttgaaat ggccgaatat
    18601 atagggatta gcgagccaca gaaattagta caattattta ttaaccatga taggaaggtg
    18661 agacgccaat gaatcaatat aatactatag gttttcaccc gggaaatagt cgtattcatc
    18721 aattaaatgc gactgttaaa cttttattct tattagttgt ttctatttct gcaatggtga
    18781 cttatgacac aagatattta attttaatta gtgcttcatc tattttattg gtcaaatatg
    18841 ctcatattga atggaaacaa gttcgctttg ttgttaaatt cattctgttt ttcacaatat
    18901 taaatattat tgccgtgtac atatttgacc ctgaatatgg tgtgaagatt tataatcagc
    18961 gtacagagtt agtcaatggt attggtcgat ttacgctaac atcacaggaa ttattctatc
    19021 tttttaatct aatattaaaa tatattagta cagttccttt agcgttaata tttttattca
    19081 caacgaatcc gagtcatttt gctgcaagtt taaatcagct aggtgtgaat tataaaatca
    19141 gttacgcagt ctcactagca ttaaggtata ttccagatat tcaagaaaca tattttaata
    19201 tttcacaagc gcaacaagca agaggatatg ataattcgaa aaaagcaaaa tttactagcc
    19261 gtgttaaagg tatcaaacgc attgtgttac ctttaatatt ttctagtatc gaaagaattg
    19321 acactattag tactgctatg gagttaagac aattcggaca gtataaaagg agaacctggt
    19381 acgtcaaaaa acaattaaaa aaagatgatt atgttgtttt gtgtttgacg ttaatacttc
    19441 tgatgttagt agttacatta ttctttttaa ataatagtcg atatttcaac ccgtggcatt
    19501 agtattcata taaatagtct ttaaatagaa ataggaggga gacatttaat gataaatact
    19561 gaaagattaa atttaatgat tccaagttcc tcgcatttaa ttgaacttta taatatttgt
    19621 agtcatccac aagcaaatat atacactccc aaaggtttac ataattccaa attagacaca
    19681 caacggtgga ttgaaaaatg gcgaaaccat tggcaacaat atcaatttgg ttactttgta
    19741 ttggtaaaaa aaatagattg tagtgttatt ggtatttgtg gatatgaata tcgacaatta
    19801 aagaaagaaa cagtattaaa tttattttat aaattacatc caagttttga aggacaaggg
    19861 tacgcatgtg aggctattac agcaatcaca aattttgtga attatatcga tcaagaaaca
    19921 gtaaaagtta tcaggacaaa taagtgtaac caacgttcaa taaatttagc agaaaggctt
    19981 aaattcaagc gagacgatac tatggacgac attatcaatc aaggagatat tgtgttttat
    20041 aaataaaata ctatgacatt atctaaaaaa taaaattaaa atcccaacag tttcttaaaa
    20101 agttatgagc cacataataa aaatgttata attgtgcata ataaaacata gggagaatgt
    20161 ttaatgcata aaaaatattt attgctattt tttctgttat tatcagttgc attgttatat
    20221 agctgttcca agcaaaatga gaaagctcaa aataaatctg ttaatccaaa tgagtatgca
    20281 aagcataaat cgaaaatgga tgaacattgg gaaacatatc acggccaagt ttatcatgtg
    20341 ttttatcacc cattaattac agacccaaaa gttgcgttta caggagatac acaccaagct
    20401 aagggcaaca atgattggat gattactgta agtgaattta aaaaatcatt gaacgaatta
    20461 tataaaaata attacatcat cgttaatcca catgatgtat acgacttatc atctcatcat
    20521 gtaaaagcca aaaaaataaa attgccgaaa ggtaaaaagc cactaatcat ctcaattgat
    20581 gatatgaatt actatagtta catgagacac catggttatg ctgaccgttt agtactcgat
    20641 aaaaataaac atgttgtttc tgaaactaca gacaaaaaag gccatgctac ttattctgat
    20701 gacaatgata tcgtgccaat tttaaataaa tttgtaaaag agcatccaga tttttcttta
    20761 aatggtgaaa aaggtgttgt tgctttaacc ggttatgagg gcgtattagg ttatcgcacg
    20821 aatgaattaa cgagtaaaga ttatacaaag aataaaaagg cagctgagga agttgttcgc
    20881 gcaatgaaac gggatggatg gtcatttgcg agtcattcat atggtcacat taattttgaa
    20941 aaaacatctt tagaaggtat taaacgtgat actaaaagat ggaaagatga agttgaacca
    21001 attgtaggta aaacagatat gtttgtattt ccacatggcg cacaggatag acatacacaa
    21061 gcgtatgatt atttggtaga tgaagcagag tttaagttta ttgcaggtgt cggtccaaac
    21121 aattttacag atatatcagc aacgaacgtt taccaagata gggttgcgat tgatggtcta
    21181 aacttatttg aatttaaata taaactcaaa ccgtttttta atcctgaaaa tgtatatagt
    21241 aaacaagata gacgttactt taaagggaat cgggattatg aagaatagtt aaatttaata
    21301 aaaagataga aagaaaataa ctttacataa taaggcaagg acaatatgtg caagaagtac
    21361 aacttcaata taaaaatctt ggttaagcat ttttataggc acaaatgtct tgcctttttt
    21421 attttaaaaa attttaaaat caatacaccg aattttctga aaaaggttgt aatgtattgc
    21481 taaaaatgat aagttattaa tcatattaca ctttagcgtg gtagagaagt aaagcaaaca
    21541 acgaaaatac caagtgattt taaatacagt attgaaagta aagggtggtc gagtgaataa
    21601 ttcagaacaa ttaattgcgt taaaagaatc ggaaacagca tttttaaaat attttaataa
    21661 agcggattat gagttagttg attttagtgt ggttgaaaag ttggactgga aacaattgaa
    21721 ccatgaggat ttgcagcaga tgggtgagcg aaatttttgg caacatgagc atcaaattta
    21781 tgcacttcga aatgatttta cagatcaatt attgcgttat tactcaatgt atccaactgc
    21841 agcaacaaaa gtggcataca caggtttaat cattcggaat aatgaagcgg ctgtacaagt
    21901 tggtttggaa aactatgcac catcattagc gaatgtgcaa cagagcttaa agctctttat
    21961 tcagtttatt caacagcagt tgagagacaa cgtgcatttt gttgtattgg gacattatca
    22021 attgcttgat gccttactcg ataaatcgtt acaaacacca gacatactat caatgattga
    22081 ggaacgtaat ttatcgggac tggttacata tttgtcgact gaacatccaa tcgtgcaaat
    22141 cttgaaagag aatacgcaac aacaattaaa tgtattggaa cactatattc caaatgacca
    22201 tccagcactc gttgaattaa aaatatggga acgttggtta cataaacaag gttacaaaga
    22261 catccattta gatattactg cgcagccacc tagatcctat tacacaggtt tatttattca
    22321 atgtcatttt gctgaaaatg aatctcgagt tttaacaggt ggttattaca aaggaagcat
    22381 cgaagggttt ggattaggat taacacttta agtaagggag tatgcacaat gttaagaatc
    22441 gccatagcca aaggacgtct aatggatagt ttaattaact atttagatgt aattgaatat
    22501 acgacattat cagaaacatt aaaaaataga gaacgccaat tattattaag tgtagataat
    22561 attgaatgca ttttagtaaa aggaagtgac gtgccaatct atgtggaaca aggaatggca
    22621 gacataggca ttgttggtag cgacatatta gatgagcgcc aatataatgt taataatttg
    22681 ttgaatatgc cttttggagc atgtcatttt gcggttgcag cgaaacctga aacgaccaat
    22741 tatcgtaaaa tcgcaacgag ttatgttcat actgctgaaa catattttaa atcaaaaggt
    22801 attgatgtcg aattgattaa attgaatggc tctgttgaat tggcctgtgt tgtagatatg
    22861 gtagacggaa ttgtcgacat cgttcaaaca ggtactacgc taaaagcgaa cggactggtt
    22921 gaaaagcaac atattagtga tatcaatgca agattaataa ctaataaagc agcttatttt
    22981 aaaaaatcac aattaataga gcaatttatt cgctctttgg aggtgtctat tgccaatgct
    23041 taatgcacaa caatttttaa atcaattttc attagaagca ccattagatg agtcattgta
    23101 tccaattatt cgcgatattt gtcaggaagt taaagttcat ggagataagg ctttgaaaat
    23161 gtataatcta acattcgatc atacgaaaac agatcattta gaaattagtc atgaacaaat
    23221 taaagcagca tttgacacat tagatgaaaa aacaaaacaa gcattacaac aaagttatga
    23281 aagaattaaa gcatatcaag aaagtattaa acagacgaat caacagttag aagaatcagt
    23341 ggagtgttat gaaatatacc atccactaga aagtgtcggt atttatgtgc ctggtggtaa
    23401 agcaagttat ccttcaacgg tattaatgac agcgacgtta gcacaagtag caggtgtgga
    23461 aaatattgtc gttgtgacac cacctcaacc taatggtgtg tctcaagaag tattagcagc
    23521 atgctatatt acgcaagttg atcaagtatt tcaagttggt ggtgctcaaa gtattgctgc
    23581 gttaacttat ggcacagaaa cgatacctaa agttgataag attgtaggtc caggcaatca
    23641 atttgttgca tatgccaaga aatatttatt tggacaagta ggtattgacc aaatagctgg
    23701 accaacagaa atagcactta ttattgatga aacagcagat ttagatgcca tcgtatatga
    23761 tgtttttgca caagcagaac atgatgaatt agcacgtaca tatgccatta gtgaagatgc
    23821 gcaagtcctt aaagatttag aatcacgtat tgctaaagca ttgcctaatg tggacagata
    23881 cgacattgtt tctaaaagta tcgctaatca acactacctt atccatgcta gtaattttga
    23941 tgaagcatgc catgtcatga atacaatcgc gcctgaacat gcgtcgattc aaacagtaaa
    24001 tcctcaacca tatattgaaa aagtgaaata tgtgggtgca ttgtttattg gacattattc
    24061 gccagaggtc ataggagatt acgttgcagg tccaagtcat gtattaccta caaatagaac
    24121 agctagattt accaatgggt tatcggtcaa tgatttctta acacggaaca cggtcatcca
    24181 tttatcaaaa gatacgtttg aacaaattgc tgattcagca caacatattg ctcatgttga
    24241 agcattatac aatcaccagc agtctatttt aatacgtcag tcttagggga gtgtaattga
    24301 aatgatttat attgataaaa atgaaagtcc agttacgccg ttggatgaaa aaacaatgac
    24361 gtctattatt agtgcaacgc catataattt atatcctgat gcagcatatg aacaattcaa
    24421 ggaagcttat gctaagtttt acggattatc gcctgaacaa attattgcag gaaatggatc
    24481 tgatgaattg attcaaaagt taatgctgat catgccagaa ggtccggcat taacgctaaa
    24541 tcctgatttt tttatgtatc aagcatatgc ggcacaagta aatcgtgaaa ttgcatttgt
    24601 agatgcagga tcagatttaa cgtttgattt ggaaaccatt ttaacgaaaa tcgatgaagt
    24661 acaaccatca ttttttatta tgagtaatcc acataaccct tcaggcaagc aatttgatac
    24721 ggcattttta acagctattg cagataagat gaaagcatta aacggatact ttgtcattga
    24781 tgaagcatat ttagattatg gtacggcata tgacgtggaa ctggcaccac acatcttaag
    24841 aatgcgtaca ttatcaaagg cgtttggaat tgccggctta agattaggtg tcttaattag
    24901 tactgctgga acgataaagc atattcaaaa aatagaacat ccatatccat taaatgtatt
    24961 tacgctaaat attgcgactt atatttttag acatagagaa gagacaagac aatttttaac
    25021 gatgcaacga cagttagctg agcagttaaa acaaatattt gatacacatg ttgcagataa
    25081 aatgtcagtg ttcccatcaa atgctaattt tgtacttact aaaggctcag cagcgcaaca
    25141 attaggacaa tacgtatatg aacaaggatt taaacctcgc ttttatgatg agccggtgat
    25201 gaagggctat gtaagatact caattgcaac agcatcacag ttaaagcaat tagaagaaat
    25261 tgttaaagaa tggagtgcaa aatatgattt atcaaaaaca acgaaacaca gctgaaacgc
    25321 aactaaatat ttcaatatct gatgatcagt caccatcgca tattaataca ggtgtgggct
    25381 ttttaaatca tatgttaacc ttgtttacat ttcatagcgg tctgtcatta aacattgagg
    25441 cacaaggtga tattgacgta gatgatcacc acgtaactga agatatcggc attgtcattg
    25501 gccaattgtt acttgaaatg attaaagata aaaagcattt cgttcgttat ggaacgatgt
    25561 acattccaat ggatgaaaca ttagcacgtg tcgttgtgga tataagtggg cgcccatacc
    25621 tatcattcaa tgcatcatta agtaaagaaa aagttggtac gtttgatacg gagttagtag
    25681 aagaattttt tagagcggtc gtaatcaatg caagattaac aacgcatatt gatttaattc
    25741 gtggaggtaa tacacaccat gaaattgaag ctatattcaa agcgttttcc cgtgcattag
    25801 gcatagcgct aactgcaact gatgatcagc gtgtgccgtc atcgaaaggt gtgattgaat
    25861 gattgtcatc gttgattatg gattagggaa tattagtaat gtaaaacgcg ctattgaaca
    25921 tttagggtat gaggtggttg tctcaaatac ctcaaaaata atcgatcaag cagaaacaat
    25981 catattgccc ggtgtcggcc attttaaaga tgcgatgtca gagataaaac gattaaatct
    26041 caatgcaata ttggctaaga atactgataa gaagatgatt ggtatttgtt taggcatgca
    26101 attaatgtat gagcatagtg atgaaggcga tgcatctgga ttagggttta tcccaggaaa
    26161 tatttcgcgt atccaaacag aatacccagt gccacactta ggctggaata atttagtgag
    26221 taagcaccct atgttaaatc aagatgttta tttcgtacat tcttatcaag cgccgatgtc
    26281 agaaaatgta attgcatatg cgcagtatgg ggctgatatt ccggcaattg ttcaatttaa
    26341 caattatatt ggtattcaat tccatcctga aaaaagcggt acatatgggt tacaaatttt
    26401 gcgtcaggca atacaagggg gatttataaa tgattgaatt atggccagcg attgatttga
    26461 ttgggtcaac aagtgtgagg ttaacagagg gtaaatatga tagtgaagaa aaaatgtcac
    26521 gctcggctga agaaagtatt gcttactata gtcaatttga atgtgtgaat cgtattcata
    26581 tcgtcgactt gataggtgct aaggcacagc atgcccgaga gtttgattat attaagtcat
    26641 tgaggagatt aacaaccaaa gatattgaag taggtggtgg cattcgtacg aagtcacaaa
    26701 tcatggacta ctttgccgca gggattaatt attgcatagt tggaacgaaa ggtattcaag
    26761 atactgattg gcttaaagag atggcacata catttccagg tcgcatttat ttatctgttg
    26821 atgcctatgg agaagatatt aaagtgaacg gatgggaaga ggacacagag ttaaatttat
    26881 ttagttttgt gagacggtta tcggatatac ctcttggcgg cattatatat actgatattg
    26941 ctaaagatgg caaaatgtcc ggacctaact ttgaattaac tggtcaatta gtaaaggcaa
    27001 cgacgattcc tgtcattgct tccggtggta ttagacatca gcaagatatt caacgattag
    27061 cgtcgctaaa tgttcacgct gctattatag gaaaggctgc acatcaagca tctttttggg
    27121 aggggctaaa atgattaaaa aacgtatcat tccatgttta gatgtcaaag atggtcgtgt
    27181 cgttaaaggg attcaattta aaggattaag ggatattggg aatcctgttg atttagcaat
    27241 gtattacaat gaagcgggtg ctgatgaatt agtattttta gacatctcta agacggaaga
    27301 gggtcatagc ttaatgctag aagtgattga acagacagcg tcacgcttgt ttatccctct
    27361 tactgtaggg ggtgggattc aaagtctcga tgatattacc caattgctaa atcatggtgc
    27421 agataaagta tcattaaatt caagtgcttt aaaaaatcca cagctcatta aacaagcgag
    27481 tgataaattc ggtagacaat gcatctgcat agcaattgat agctattatg atcctgaaag
    27541 aaaagcacat tattgttgta cgactggtgg taaaaaaatg acaaatatta aagtatatga
    27601 ctgggtacag caagtagaac agttaggtgc aggtgagctc ctcgttacaa gtatgggaca
    27661 tgatggtatg aaacaaggct ttgatattga acacctagca aatattaagt ctcttgtaaa
    27721 tattccaatc attgcttctg gtggtggtgg caatgcacaa cactttgtag aattatttga
    27781 tcagacggat gtttctgcag gtttagctgc aagtatatta catgatcgag aaacgacggt
    27841 tcaatctatt aaagaagtga tacggcaagg gggtatagca gtaagatgac caaatataaa
    27901 attgatttta gcaaaggttt agtgccagca attttacaag ataatcaaac aaaacaagta
    27961 ttgatgttgg gttatatgaa ccaagaagct tttgataaaa cgatagaaga tggtgtggta
    28021 tgtttctatt cgcggtcgaa acaacggcta tggacaaaag gtgaaacatc tggtcatacg
    28081 caacgtgtta aagatattca tgtagattgc gacaatgaca ctattttaat tgatgtcata
    28141 ccaaatggac caacatgtca tacaggcagt caaagttgtt tcaacacaga agttccattt
    28201 tcagtgcaaa cattagcgca gacagttcaa gatagtgccc aatccaataa tgaaaagtca
    28261 tatacaaaat atttattaac agaaggtata gaaaagatta caaaaaagca tttgtaagtg
    28321 aagtagcaga tgaactttat catttatttg tcttgatgca tgcgcttggc gtcgattttt
    28381 cagaaattga ggcggaatta gcgcgtagac atcataagcg caataacttt aaaggtgaac
    28441 gacaaaatat cgaacagtgg taaagcaagt atggactaag atataaggaa aaggatcatg
    28501 gcttatacac ttacaaatat tgtggaaaac gtgacatttt caagtttaaa atacgacacc
    28561 aacatatttt aactatgaat gctgtgatgg tactaaagtt gcgaactcgt tatagataag
    28621 tagtggataa tcacaatacg aaatcaaaaa taattataaa aagtaaattg agcaactcag
    28681 gaatagatgt cactgttaaa gatgtcgaaa agtatatgaa tcgatataat gaagttatga
    28741 agggaaaaaa tggcgaaaaa gctaaagagt tatgtttgtc gttactacct attaatatca
    28801 tagttgtctt tacattcttt gtatttatac tataaataca aatatatcta gcctgaaata
    28861 gaaatgtcat agcctattta aaagacaatc tccattagaa ctaagatatg catcccgaaa
    28921 gttagactaa aaaactaact ttatgggatg tatttttatg ctaatcatca taaattcgag
    28981 attaagttaa aggtagttca agagtaatta aacaataaat taaaaatagt aggatactta
    29041 ctttgaggga agaaaattaa ctgtatatat ttagtttagg aacaagtatt acggtttatc
    29101 ctgatacaat tattgtggat gggatgatat ttttaggttt aaaatacgac accagcaaac
    29161 ataataactg taatagctca taaatctccc catatagcta atctaaaaaa ataatacatc
    29221 attggaatta agccccaagc atgtaaatat taaaaatcaa aaaagatata tgtaaaaaaa
    29281 ttacaatttg cataattaaa ttgtgtctaa ttattgacta attaaatttt gccaaatata
    29341 atattaatta ataatttgaa atgattagcg tatacacttt aaattctctt tggagaatat
    29401 attttttaaa tacaaatgta aacgctttct cgtcaaatta aacaatagaa aggatggtca
    29461 ttatgagtgc ttggttaagt aaattatttg agtttattcc tcgaataatt atcaatttgt
    29521 ttatctaaaa taaaaaaata gaggtgctga caatgatgaa aagtcaaaat aagtatagta
    29581 ttcgtaaatt tagtgtaggt gcatcttcca ttttaatagc tacattacta tttttaagtg
    29641 gtggacaagc acaagcagct gagaagcaag tgaatatggg aaattcacag gaggatacag
    29701 ttacagcaca atctattggg gatcaacaaa ctagggaaaa tgctaattat caacgtgaaa
    29761 acggtgttga cgaacagcaa catactgaaa atttaactaa gaacttgcat aatgataaaa
    29821 caatatcaga agaaaatcat cgtaaaacag atgatttgaa taaagatcaa ctaaaggatg
    29881 ataaaaaatc atcgcttaat aataaaaata ttcaacgtga tacaacaaaa aataacaatg
    29941 ctaatcctag cgatgtaaat caagggttag aacaggctat taatgatggt aaacaaagta
    30001 aagtggcgtc acagcaacag tcaaaagagg cagataatag tcaagattca aacgctaata
    30061 acaatctacc ttcacaaagt cgaataaagg aagcaccatc attaaataag ttagatcaaa
    30121 caagtcaacg agaaattgtt aatgagacag aaatagagaa agtacaacca caacaaaata
    30181 atcaagcgaa tgataaaatt actaactaca attttaacaa tgaacaagaa gtgaaacctc
    30241 aaaaagacga aaaaacacta tcagtttcag atttaaaaaa caatcaaaaa tcaccagtag
    30301 aaccaacaaa ggacaatgac aagaaaaatg gattaaattt attaaaaagt agtgcagtag
    30361 caacgttacc aaacaaaggg acaaaggaac ttactgcaaa agcgaaagat gatcaaacga
    30421 ataaagttgc caaacaaggg cagtataaaa atcaggatcc tatcgtttta gtgcatggtt
    30481 tcaatgggtt tacagatgat attaatcctt cagtgttagc tcattattgg ggcggtaata
    30541 aaatgaacat tcgccaagat ttagaagaaa atggttacaa agcttatgaa gcaagtataa
    30601 gtgcttttgg aagtaactat gaccgcgcag ttgaacttta ttattatatc aaaggcggtc
    30661 gtgtagatta tggtgcagca catgcagcaa aatatggaca tgaacgttat ggaaaaacat
    30721 acgaaggaat ttacaaagac tggaaaccag gacagaaggt acacctagtt ggacatagta
    30781 tgggcggtca aacgatacgt caactagaag aattactgcg taatggtaat cgtgaagaaa
    30841 tagagtatca aaagaaacat ggtggcgaaa tttctccact attcaaaggt aatcatgaca
    30901 atatgatttc atcaattact actttaggaa caccacataa tggtacacac gcatcagatt
    30961 tagctggtaa tgaagcttta gtgagacaaa tcgtatttga tatcggtaaa atgtttggta
    31021 ataaaaattc aagagtagac ttcgggttgg ctcaatgggg tctaaaacag aagccaaatg
    31081 aatcatatat tgattatgtc aaacgcgtta aacaatctaa tttatggaaa tcaaaagata
    31141 atggatttta cgatctgacg cgtgagggtg caacagattt aaatcgtaaa acgtcgttga
    31201 accctaacat tgtgtataaa acatacactg gtgaagcaac gcacaaagca ttaaatagcg
    31261 atagacaaaa agcagactta aatatgtttt tcccatttgt gattactggt aacttaatcg
    31321 gtaaagctac tgaaaaagaa tggcgagaaa acgatggttt agtatccgtt atttcttctc
    31381 aacatccatt taatcaagct tatacaaaag cgacagataa aattcaaaaa ggcatttggc
    31441 aagtgacgcc tacaaaacat gattgggatc atgttgactt tgtaggacaa gacagttctg
    31501 atacagtgcg cacaagagaa gaattacaag atttttggca tcatttagca gacgatttag
    31561 tgaaaactga aaagctgact gatactaagc aagcataatt tataaagtaa agggaggaat
    31621 taataatgac tgcagacttc tttcaattaa tcggatcatt atttagaatt ctaaaagaat
    31681 tattcaagta aaacattggc gaggccccaa cataaagaat ttcgaaaaga aattctacaa
    31741 acaatgcaag ttggcggggc cccaacaaag aagctggcgg aaagtcaggt tacaataatg
    31801 tgcaagttgg ggtgggacga cgaaataaat tttgcgaaaa tatcatttct gtcccactcc
    31861 cattggcatt tacgaagttt aaatgtgcaa ttagaatata tgtataacaa tattaaacac
    31921 gcggtaaaac gaagtcagtc aattcaaact gatttcgccc accgcgtgtt tttaacatag
    31981 cttaataatt aataagcatt aatgttcaat ttatatggtt gttttccaat aataaaccta
    32041 aagatataga attcacgcaa tatcatgccg acacctatac ataatcctaa aatgaatagt
    32101 agtgatatcg ctagaaagac cattgtatta tcctcaaata tatttgtata tgcaaacaat
    32161 gagtctagaa tgattggatg taataaataa ataaagaatg agaaagcact aatcatttga
    32221 atcgtattaa ataacattgt tttaaaatgc gtgcaaatac ccaagataac aataaacata
    32281 atactattat atggtgttaa tgaatatgaa aagctggtaa cgttccaata gtctccattt
    32341 gctaacgcaa taaacacaaa ataagtagct acagctaata caatcataat aactaaataa
    32401 cgttctaaga aatttaatac acgttcgtag ttataaccca tatatgcacc taagaagaaa
    32461 taaaaaatcc atccgaatat tatagtattt tcacttaatg gataatagtg tagcacggta
    32521 tcgtgaaacg ctgtgttgtt cgtaaagtaa tataaaaatg attgctgtaa aataaaagat
    32581 aacaataata atattttact gttgaatagg ttatagttaa ttttaaaaat gatataactc
    32641 aaaataaaga attgcatgat aacaacgata aaatagccat accattgacc taataggaca
    32701 ttttcaatga attgtttatt gaaacttgaa tctgttaata atgattcact ataactgtaa
    32761 aacaatccca ttaatatgta aggaataagt atatatttta cgcgtgtagt taagtatcta
    32821 taggtgactt tttggtaatt caaggttgtc agtaactgtg acaagataat aaagcaaggt
    32881 gtaccaaaaa tcacaatatt acgaatgtaa aattgtaaca ctaaggatcc accctccata
    32941 ttttcatgtt ttaaagtaat ttgtgtaagt aaatgtgtga taataataat tgcacatata
    33001 atagcacgta aatatacgag ttcaagtcta atctttttca tggaatccgt cccatctctt
    33061 aattaaatgc tcaaaagcat catcactaat taatattcta gggatgtaat aatcattgga
    33121 gttcggagtg actgcttttt cctctaatga aaaaccgtat tttaacccag cttttttgat
    33181 taccggtaat ttatcgtcat tcatcaagcc ataaggatag gctatagttt tctgcgactt
    33241 tttaaagttt ttagttagat atttttcact tttgtttaaa tcttttatga ttgtagcttc
    33301 agaagctttc attaattttg acttattatt tttagataag ttatgcaaat cgtgggtatg
    33361 tgtttcaaat tcccataacc cagttttata catttctttt agttcttttt tactaatcat
    33421 atcgaggttg tgaaagtttt cttccccaac atgacctgtg ataataaacc cagttgccgg
    33481 tattttatat ttttttaaga ttggataagc attttcataa atagtttcat ccatatcatc
    33541 aaagttaatc catacacttc gttttggaaa cttacctttt ttcttgtaat ataaaaattc
    33601 tttcaaggtt aaaaatttag catcatgtga ttttagccat tttatttgag attcaaattg
    33661 tgattgacta acactataat ttttaatttc tttactacta gaaaagaagt aaataaaatt
    33721 attcagaaaa ttcgcttttc ttacacggtg ataatttaat gccagagcac tattttcttt
    33781 atatttcagt tttttaggtg aatcgtcatc tgcatttgca atatgatgac catccagtgt
    33841 gcttacaggc aatatgatca agatactcaa cactaaaatt ataaattttc tatacttcac
    33901 gattctcttc ctctctgcca tttttgaatc aatatgctaa ttgtaaaaaa tac
//
LOCUS       DALPQQ010000016        31909 bp    DNA     linear   BCT 22-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus strain K18-6-464
            SAMD00233528-rid16434743.denovo.016, whole genome shotgun sequence.
ACCESSION   DALPQQ010000016 DALPQQ010000000
VERSION     DALPQQ010000016.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMD00233528
            Sequence Read Archive: DRR236061
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 31909)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 31909)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001543423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001543423.1
            Genome Coverage       :: 77x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/22/2022 17:09:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,811
            CDSs (total)                      :: 2,743
            Genes (coding)                    :: 2,689
            CDSs (with protein)               :: 2,689
            Genes (RNA)                       :: 68
            rRNAs                             :: 2, 4, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 4, 2 (16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 54
            CDSs (without protein)            :: 54
            Pseudo Genes (ambiguous residues) :: 0 of 54
            Pseudo Genes (frameshifted)       :: 27 of 54
            Pseudo Genes (incomplete)         :: 27 of 54
            Pseudo Genes (internal stop)      :: 10 of 54
            Pseudo Genes (multiple problems)  :: 10 of 54
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..31909
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMD00233528-rid16434743.denovo.016"
                     /strain="K18-6-464"
                     /db_xref="taxon:1280"
                     /geo_loc_name="Japan: Niigata"
     gene            complement(1..1080)
                     /locus_tag="O7798_000654"
                     /pseudo
     CDS             complement(1..1080)
                     /locus_tag="O7798_000654"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500098.1"
                     /note="frameshifted; incomplete; missing C-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            complement(1073..2002)
                     /locus_tag="O7798_000655"
     CDS             complement(1073..2002)
                     /locus_tag="O7798_000655"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001646493.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1672 domain-containing protein"
                     /protein_id="HDC2862926.1"
                     /translation="MKKFIGSVLATTLILGGCSTMENESKKDTKTETKSVPEEMEASK
                     YVGQGFQPPAEKNVIEFAKKHRKEFEKVGEQFFKDNFGLKVKATNVVGKDDGVEVYVH
                     CEDHGIVFNASLPLYKDAIHQKGSMRSNDNGDDMSMMVGTVLSGFEYRAQKEKYDNLY
                     KFFKENEKKYQYTGFTKEAINKTQNVGYKNEYFYITYSSRSLKEYRKYYEPLIRKNDK
                     EFKEGMERARKEVNYAANTDAVATLFSTKKNFTKDNTVDDVIELSDKLYNLKNKPDKS
                     TITIQIGKPTINTKKAFYDDNRPIEYGVHSKDE"
     gene            complement(2247..3998)
                     /gene="srrB"
                     /locus_tag="O7798_000656"
     CDS             complement(2247..3998)
                     /gene="srrB"
                     /locus_tag="O7798_000656"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500100.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-component system sensor histidine kinase
                     SrrB"
                     /protein_id="HDC2862927.1"
                     /translation="MMSRLNSVVIKLWLTIILIVTTVLILLSIALITFMQYYFTQETE
                     NAIREDARRISSLVEQSHNKEEAIKYSQTLIENPGGLMIINNKHRQSTASLSNIKKQM
                     LNEVVNNDHFDDVFDKGKSVTRNVTIKEKGSSQTYILLGYPTKAQKNSHSKYSGVFIY
                     KDLKSIEDTNNAITIITIITAVIFLTITTVFAFFLSSRITKPLRRLRDQATRVSEGDY
                     SYKPSVTTKDEIGQLSQAFNQMSTEIEEHVDALSTSKNIRDSLINSMVEGVLGINESR
                     QIILSNKMANDIMDNIDEDAKAFLLRQIEDTFKSKQTEMRDLEMNARFFVVTTSYIDK
                     IEQGGKSGVVVTVRDMTNEHNLDQMKKDFIANVSHELRTPISLLQGYTESIVDGIVTE
                     PDEIKESLAIVLDESKRLNRLVNELLNVARMDTEGLSVNKEVQPIAALLDKMKIKYRQ
                     QADDLGLNMTFNYCKKRVWSYDMDRMDQVLTNLIDNASRYTKPGDEIAITCDENESED
                     ILYIKDTGTGIAPEHLQQVFDRFYKVDAARTRGKQGTGLGLFICKMIIEEHGGSIDVK
                     SELGKGTTFIIKLPKPE"
     gene            complement(3979..4704)
                     /gene="srrA"
                     /locus_tag="O7798_000657"
     CDS             complement(3979..4704)
                     /gene="srrA"
                     /locus_tag="O7798_000657"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500101.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-component system response regulator SrrA"
                     /protein_id="HDC2862928.1"
                     /translation="MSNEILIVDDEDRIRRLLKMYLERESFEIHEASNGQEAYELAME
                     NNYACILLDLMLPEMDGIQVATKLREHKQTPIIMLTAKGEETNRVEGFESGADDYIVK
                     PFSPREVVLRVKALLRRTQSTTVEQSEPHARDVIEFKHLEIDNDAHRVLADNQEVNLT
                     PKEYELLIYLAKTPNKVFDREQLLKEVWHYEFYGDLRTVDTHVKRLREKLNRVSSEAA
                     HMIQTVWGVGYKFEVKSNDEPAK"
     gene            complement(4837..5574)
                     /locus_tag="O7798_000658"
     CDS             complement(4837..5574)
                     /locus_tag="O7798_000658"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500102.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rRNA pseudouridine synthase"
                     /protein_id="HDC2862929.1"
                     /translation="MTKELERLQKRIANSGYTSRRKAETLISEGKVKVNGTTVTELGT
                     KVKPSDTIEVEGIKIELEDKIYILFHKPTQVITSVSDDRGRTVVTDYFKDIEARIYPV
                     GRLDYDTSGLLLLTNDGEFTNLMTHPRYQIKKKYVAKLKGYLMREEVKALEKGIELED
                     GMTQPAEVKVKKQDKDKNTTLVEITITEGRNRQVRRMFEHFGHQVTKLSRIEYGPLNV
                     VGLNAGEGRVLTPHEVKVMRHLAEHGK"
     gene            complement(5567..6109)
                     /gene="scpB"
                     /locus_tag="O7798_000659"
     CDS             complement(5567..6109)
                     /gene="scpB"
                     /locus_tag="O7798_000659"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500103.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SMC-Scp complex subunit ScpB"
                     /protein_id="HDC2862930.1"
                     /translation="MDNHGILESLLFTAGDEGLDEKQLLEILDMSKDQLVELIENYSS
                     HGLMIQRFGMTYVLTTKKEAATYIEQLIEQKSQMKLSQAAMEVLSIIAYNQPLSRSDI
                     ELIRSINSDGAVKTLIAKGLVEAKVVNEQRSQQLITTDLFLNVFGISNIEDLPTTEED
                     DEEMDAFFSNLVNQKGENND"
     gene            complement(6102..6833)
                     /locus_tag="O7798_000660"
     CDS             complement(6102..6833)
                     /locus_tag="O7798_000660"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500104.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="segregation/condensation protein A"
                     /protein_id="HDC2862931.1"
                     /translation="MYEVKLDAFNGPLDLLLHLIQKFEIDIYDIPMQALTEQYMQYVH
                     AMKQLEINIASEYLVLASELLMIKSKMLLPQSTSDMDVDDDPREDLVGRLIEYQNYKE
                     YTAILNDMKEERDFYFTKRPTDLSHLETDESWDPNHTIDLTELIVAYQRVKNRVELNT
                     PKSVEIRKETFTIQQATEQVTSRLKDKDHFNFFSLFTFSEPIEQVVTHFLAILEMSKA
                     GIINIEQQRNFEDINIIRGVNYHFG"
     gene            6925..7431
                     /locus_tag="O7798_000661"
     CDS             6925..7431
                     /locus_tag="O7798_000661"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500105.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF309 domain-containing protein"
                     /protein_id="HDC2862932.1"
                     /translation="MQQALINFYYQFHTKQHYFLCHDILEDAWKAENNYSKQDAVVSL
                     ILFATACYHYRRNNLKGAYKSFNKSKEIIQNAKDRDALYLNLNDYQLLIEQQIAKLNA
                     AKPFSSVILPITPVFERIIKANYPDYDYNQETATDPFIVDHHMRRDRSEVIAAKEEAI
                     QLRKHRRN"
     gene            complement(7509..8396)
                     /gene="xerD"
                     /locus_tag="O7798_000662"
     CDS             complement(7509..8396)
                     /gene="xerD"
                     /locus_tag="O7798_000662"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500106.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="site-specific tyrosine recombinase XerD"
                     /protein_id="HDC2862933.1"
                     /translation="METIIEEYLRFIQIEKGLSSNTIGAYRRDLKKYQDYMTEHHISH
                     IDFIDRQLIQECLGHLIDQGQSAKSIARFISTIRSFHQFAIREKYAAKDPTVLLDSPK
                     YDKKLPDVLNVDEVLALLETPDLNKINGYRDRTMLELLYATGMRVSELIHLELENVNL
                     IMGFVRVFGKGDKERIVPLGDAVIEYLTTYIETIRPQLLKKTVTEVLFLNMHGKPLSR
                     QAIWKMIKQNGVKANIKKTLTPHTLRHSFATHLLENGADLRAVQEMLGHSDISTTQLY
                     THVSKSQIRKMYNQFHPRA"
     gene            complement(8445..8894)
                     /locus_tag="O7798_000663"
     CDS             complement(8445..8894)
                     /locus_tag="O7798_000663"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500107.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional repressor"
                     /protein_id="HDC2862934.1"
                     /translation="MEERLNRVKQQLQQSSYKLTPQREATVRVLIENEKDHLSAEDVY
                     LKVKDKAPEIGLATVYRTLELLAELKVVDKINFGDGVARFDLRKEGAKHFHHHLVCME
                     CGRVDEIDEDLLPEVENRVENEFNFKILDHRLTFHGVCETCQAKGKG"
     gene            complement(8999..9541)
                     /locus_tag="O7798_000664"
     CDS             complement(8999..9541)
                     /locus_tag="O7798_000664"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500108.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NUDIX hydrolase"
                     /protein_id="HDC2862935.1"
                     /translation="MDLNEKTIDRTVIYNGKIVDVEIHTVTLPNGETSTRELVYHNGA
                     VAVCAVTPKKEVVLVKQYRKPVEKPLLEIPAGKLEDDEDRVEAAKRELEEETGYIAKE
                     LTHVVDMYGSPGFCDEQLSIYFTDNLEEGTVHLDEDEFVEVIKVPIENVKSMLMNKEI
                     EDAKTIIALQHLLLNYNHSK"
     gene            9623..10531
                     /locus_tag="O7798_000665"
     CDS             9623..10531
                     /locus_tag="O7798_000665"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500109.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aldo/keto reductase"
                     /protein_id="HDC2862936.1"
                     /translation="MQKNILKSGISLSELGLGCMSLGTDLKKAEQIIDCAVENGITYF
                     DTADMYDKGINESVVGKALLKYQQRDDIFIGTKVGNRLTKDGSTTWDPSKSYIKEAVK
                     GSLKRLGIDHIDLYQLHGGTIDDPLDETISAFDELKQEGIIRAYGISSIRPNVIDYYL
                     KHSQIETIMSQFNLIDNRPESLLDAIHNNDVKVLARGPVSKGLLTSNSVNVLDNKFKD
                     GIFDYSHDELGETIASIKEIESNLSALTFSYLTSHDVLGSIIVGASSVDQLKENIENY
                     HTKVSLDQIKTARARVKDLEYTNHLV"
     gene            complement(10747..10995)
                     /locus_tag="O7798_000666"
     CDS             complement(10747..10995)
                     /locus_tag="O7798_000666"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500110.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDC2862937.1"
                     /translation="MNCQSESVVRLCVRYAEQLSVFEEFTVLDILGDISVDQISDGTL
                     YYTCEKFKLLVLQGNVLGVQIITNNDESTCEVKYRKMF"
     gene            complement(11011..11766)
                     /locus_tag="O7798_000667"
     CDS             complement(11011..11766)
                     /locus_tag="O7798_000667"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500111.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HDC2862938.1"
                     /translation="MKGQHFIVTGGTSGLGLSIVRKLLENKVHVTLLVRDVDKATRIF
                     EQELGKTINVIPCDLNDLKSIQALQFEDNTSFDGFIYSAGLGYFKSISDHSFSEMIET
                     YQLNLISFNVLYTVLRPYLTSNAHIVGISSQAAFSTQANAAHYGASKAGFYALMNALR
                     LESPNLHIMTVNVGPIDTPFHQKADPSMKYAKKMGEIMLDANQLAEDIIYGIKTKQLE
                     INRPKWMHHALKMYQIAPRFFERCFPKLFKNKA"
     gene            11908..12723
                     /gene="proC"
                     /locus_tag="O7798_000668"
     CDS             11908..12723
                     /gene="proC"
                     /locus_tag="O7798_000668"
                     /EC_number="1.5.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002485765.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyrroline-5-carboxylate reductase"
                     /protein_id="HDC2862939.1"
                     /translation="MKLVFYGAGNMAQAIFTGIINSSNLDANDIYLTNKSNEQALKAF
                     AEKLGVNYSYDDATLLKDADYVFLGTKPHDFDALATRIKPHITKDNCFISIMAGIPID
                     YIKQQLECQNPVARIMPNTNAQVGHSVTGISFSNNFDPKSKDEINDLVKAFGSVIEVS
                     EDHLHQVTAITGSGPAFLYHVFEQYVKAGTKLGLEKEQVEESIRNLIIGTSKMIERSD
                     LSMAQLRKNITSKGGTTQAGLDTLSQYDLVSIFEDCLNAAVDRSIELSNIEDQ"
     gene            complement(12828..13748)
                     /gene="rnz"
                     /locus_tag="O7798_000669"
     CDS             complement(12828..13748)
                     /gene="rnz"
                     /locus_tag="O7798_000669"
                     /EC_number="3.1.26.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500113.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease Z"
                     /protein_id="HDC2862940.1"
                     /translation="MEVTFFGTSAGLPTKERNTQAIALNLEPYSNSIWLFDVGEGTQH
                     QILHHAIKLGKVTHIFITHMHGDHIFGLPGLLSSRSFQGGEQKPLTLVGPKGIKAYVE
                     MSMNLSESHLNYPITYIEIDDHLTYHHDGFTVEAHLLNHGIPSYGYRVMAPETTGTIN
                     VEALKNIGLEPGPKYQEVKSHDTFEHNGQVYQSKDFRGESKQGPVVAIFGDTKPCSNE
                     RVISRDADVMVHEATYIDGEKHLANNYHHSHIEDVFALIKEANVKRTLITHLSNRYNT
                     EDINEIYQTLIQNEDTPNFNFVKDFDSFKI"
     gene            14061..15545
                     /locus_tag="O7798_000670"
     CDS             14061..15545
                     /locus_tag="O7798_000670"
                     /EC_number="1.1.1.49"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500114.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucose-6-phosphate dehydrogenase"
                     /protein_id="HDC2862941.1"
                     /translation="MSTKNKHIPCLITIFGATGDLSHRKLFPSIFHLYQQDNLDEHIA
                     IIGIGRRDITNDDFRNQVKSSIQKHVKDTNKIDAFMEHVFYHRHDVSNEESYQELLDF
                     SNELDSQFELKGNRLFYLAMAPQFFGVISDYLKSSGLTDTKGFKRLVIEKPFGSDLKS
                     AEALNNQIRKSFKEEEIYRIDHYLGKDMVQNIEVLRFANAMFEPLWNNKYISNIQVTS
                     SEILGVEDRGGYYESSGALKDMVQNHMLQMVALLAMEAPISLNSEDIRAEKVKVLKSL
                     RHFQSEDVKKNFVRGQYGEGYIDGKQVKAYRDEDRVADDSNTPTFVSGKLTIDNFRWA
                     GVPFYIRTGKRMKSKTIQVVVEFKEVPMNLYYETDKLLDSNLLVINIQPNEGVSLHLN
                     AKKNTQGIETEPVQLSYSMSAQDKMNTVDAYENLLFDCLKGDATNFTHWEELKSTWKF
                     VDAIQDEWNMVDPEFPNYESGTNGPLESDLLLARDGNHWWDDIQ"
     gene            15775..16641
                     /locus_tag="O7798_000671"
     CDS             15775..16641
                     /locus_tag="O7798_000671"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014373838.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AraC family transcriptional regulator"
                     /protein_id="HDC2862942.1"
                     /translation="MDVIKQIQQAIVYIEDRLLEPFNLQELSDYVGLSPYHLDQSFKM
                     IVGLSPEAYARARKMTLAANDVINGATRLVDIAKKYHYANSNDFANDFSDFHGVSPIQ
                     ASTKKDELQIQERLYIKLSTTERAPYPYRLEETDDISLVGYARFIDTKYLSHPFNVPD
                     FLEDLLIDGKIKELRRYNDVSPFELFVISCPLENGLEIFVGVPSERYPAHLESRFLPG
                     KHCAKFNLQGEIDYATNEAWYYIESSLQLTLPYERNDLYVEVYPLDISFNDPFTKIQL
                     WIPVKQSPYDED"
     gene            complement(16724..18373)
                     /locus_tag="O7798_000672"
     CDS             complement(16724..18373)
                     /locus_tag="O7798_000672"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500116.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-glucosidase"
                     /protein_id="HDC2862943.1"
                     /translation="MNKQWWKEAVAYQVYPRSFNDSNHDGIGDLPGMIDKLDYLKDFG
                     IDVIWLSPMFKSPNDDNGYDISDYQEIMDEFGTMEDFDRLLKGVHDRGMKLILDLVVN
                     HTSDEHPWFIESKSSKDNPKRDWYIWQDPKPDGSEPNNWESIFNGSTWEYDANTEQYY
                     FHLFSKKQPDLNWGNPEVRDAVFEMMNWWFDKGIDGFRVDAITHIKKTFEAGDLPVPE
                     GKTYAPAFDVDMNQPGIQTWLQEMKDRSLSKYDIMTVGEANGVSPDDADDWVGEENGK
                     FNMIFQFEHLGLWNSGDSHFDVNSYKSVLNRWQKQLENKGWNALFIENHDQPRRVSTW
                     GDDDKYWYESATSHAAVYFLQQGTPFIYQGQEIGMTNYPFESIETFNDVAVKNDYQIV
                     KAQGGDVDALLAKYKDENRDNSRTPMQWDDTLNGGFTNGEPWFPVNPNYKTINVAQQL
                     EDEHSVLQFYKDLIQLRKSNDVYVYGQFDLVDAENSQVFAYTRTLNEKQVLIVGNLTN
                     HEAELTVPFDLSHGEVKLFNYDAKVNLKQLRPYEACVIELN"
     gene            complement(18389..19408)
                     /locus_tag="O7798_000673"
     CDS             complement(18389..19408)
                     /locus_tag="O7798_000673"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500117.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LacI family DNA-binding transcriptional
                     regulator"
                     /protein_id="HDC2862944.1"
                     /translation="MVTIKDVALKAGVSPSTVSRVIKGNQRISEATISKVKKVMEELN
                     YFPNTAARTLITNQTYKIGLVLKGSEEPIRLNPFYINVLLGISETCNQHGYGTQTTVS
                     NNMNDLMDEVYKMIKQRMVDAFILLYSKENDPIKQMLIDESMPFIVIGKPTSDIDHQF
                     THIDNDNILASENLTRHVIEQGVDELIFITEKGNFEVSKDRIQGFETIASQNKINYQI
                     IETSNEREVIFNYMQNLHTRLKDPNIKQAIISLDAMLHLAILSVLYELNIEIPKDVMT
                     ATFNDSYLTEIASPPQTCIDIKPRMLGQQAGAAILNILKNKAQDVIELVIIDTELKIR
                     KSTQR"
     gene            complement(19409..19663)
                     /locus_tag="O7798_000674"
     CDS             complement(19409..19663)
                     /locus_tag="O7798_000674"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500118.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDC2862945.1"
                     /translation="MVNVYLIFKMAKVTILQLVTKQSILIFIQTFILIFGLNFSMKVL
                     FLSFYAIVCTNLLTFLESVTKLVLYSGWKRFPMQKLTGGD"
     gene            complement(19602..19973)
                     /locus_tag="O7798_000675"
     CDS             complement(19602..19973)
                     /locus_tag="O7798_000675"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500119.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HDC2862946.1"
                     /translation="MEKLNQVMLYVDDVEKAKAFWTETLEFVVVSETPLAEDYVAVEV
                     SPTKDAETSLTIMAKEFIEKHSPEVNLGTPSLMFKEKNFDALYSKLNDLGLTGHDIVE
                     MNGQRVFNFQDGQGNYFAVSD"
     gene            complement(20192..21598)
                     /gene="gndA"
                     /locus_tag="O7798_000676"
     CDS             complement(20192..21598)
                     /gene="gndA"
                     /locus_tag="O7798_000676"
                     /EC_number="1.1.1.44"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500120.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADP-dependent phosphogluconate dehydrogenase"
                     /protein_id="HDC2862947.1"
                     /translation="MTQQIGVIGLAVMGKNLAWNIESRGYSVSVFNRSSEKTDLMVEE
                     SKGKNIHPTYSLEEFVNSLEKPRKILLMVQAGKATDATIDSLLPLLDDGDILIDGGNT
                     NYQDTIRRNKALAQSAINFIGMGVSGGEIGALTGPSLMPGGQEEAYNKVADILDAIAA
                     KAKDGATCVTYIGPNGAGHYVKMVHNGIEYADMQLIAESYAMMKELLGMSHEDIAQTF
                     KDWNAGELESYLIEITGDIFMKLDENKEALVEKILDTAGQKGTGKWTSINALELGIPL
                     TIITESVFARFISSIKEERVNASKELNGPKASFDGDKKDFLEKIRKALYMSKICSYAQ
                     GFAQMRKASEDNEWNLKLGDLAMIWREGCIIRAQFLQKIKDAYDNNPGLQNLLLDPYF
                     KNIVTEYQDALRDVVATGVQNGVPTPGFSSSINYYDSYRAADLPANLIQAQRDYFGAH
                     TYERKDKEGVFHTQWIEE"
     gene            complement(21666..22799)
                     /locus_tag="O7798_000677"
     CDS             complement(21666..22799)
                     /locus_tag="O7798_000677"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500121.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M20/M25/M40 family metallo-hydrolase"
                     /protein_id="HDC2862948.1"
                     /translation="MINEQRLLNTFFELVQIDSETGNESTIQPILKEKFIALGLDVKE
                     DEAAKHPKLGANNLVCTMNSTIEEGEVPKLYLTSHMDTVVPAINVKPIVKDDGYIYSD
                     GTTILGADDKAGLAAMLEVLQVIKEQQIPHGQIQFVITVGEESGLIGAKELNSELLDA
                     DFGYAIDASADVGTTVVGAPTQMLISAKIFGKTAHASTPKEGVSAINIAAKAISRMKL
                     GQVDEITTANIGKFHGGSATNIVADEVILEAEARSHDPERIKTQVKHMTDVFETTASE
                     LGGKAVVTVEQSYPGFKINDNEAVVKIAQESARNLGLSANTIISGGGSDGSIINTFGI
                     PSVILGVGYEKIHTTNERMPIKSLNLLASQVLEIIKIVARHSK"
     gene            23062..23241
                     /gene="prli42"
                     /locus_tag="O7798_000678"
     CDS             23062..23241
                     /gene="prli42"
                     /locus_tag="O7798_000678"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500122.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="stressosome-associated protein Prli42"
                     /protein_id="HDC2862949.1"
                     /translation="MLVISSQVKSFISYVVIINTKVIHLEAHKMQNKVLRIIIIVMLV
                     SVVLALLLTSIIPIL"
     gene            complement(23368..24348)
                     /locus_tag="O7798_000679"
     CDS             complement(23368..24348)
                     /locus_tag="O7798_000679"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500124.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aromatic acid exporter family protein"
                     /protein_id="HDC2862950.1"
                     /translation="MLKLNPYKIGFRTIKTAVGMTLGVIISKLLGLDNYASSAILVVL
                     CIKHTKVHSLQAIISRLVSCFLVLFLGSAIFSLLGQSPIVLGIIVLLFIPLTVVLKVQ
                     EGVITSCVILLHVFNAKSIDAHLIVNETLLLLIGLSIAFTMNLMMPSLDKQLDEYKCK
                     IEQQIADIFSKYSYICEKYEDTIAIEFEVLLLNIKKAKSIAFRDVKNHFVRNENSYYH
                     YFDMREEQVELLMRMKPLIESICHKDPLLNDVASLLKEIGLNVNSNDYTAMRLHNLYE
                     TRLKLDELPLPTTHKALNSRASIIQILNELEEYLQIKSQFGSLKMHSEVA"
     gene            complement(24362..24799)
                     /locus_tag="O7798_000680"
     CDS             complement(24362..24799)
                     /locus_tag="O7798_000680"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500125.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BrxA/BrxB family bacilliredoxin"
                     /protein_id="HDC2862951.1"
                     /translation="MDMNFDLYMNGVVEQARNEIESAGYEQLTTAEDVDKVLKQDGTT
                     LVMINSVCGCAGGIARPAASHALHYDVLPDRLVTVFAGQDKEATQRAREYFEGYAPSS
                     PSFALVKDGKITEMIERHQIEGHDVMNVINQLQTLFNKYCEER"
     gene            complement(25150..26424)
                     /locus_tag="O7798_000681"
     CDS             complement(25150..26424)
                     /locus_tag="O7798_000681"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500126.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-oxo acid dehydrogenase subunit E2"
                     /protein_id="HDC2862952.1"
                     /translation="MEITMPKLGESVHEGTIEQWLVSVGDHIDEYEPLCEVITDKVTA
                     EVPSTISGTITEILVEAGQTVAIDTIICKIETADEKTNETTEEIQAKVDEHTQKSTKK
                     ASATVEQTSTAKQNQPRNNGRFSPVVFKLASEHDIDLSQVVGSGFEGRVTKKDIMSVI
                     ENGGTTAQSDKQVQTKSTSVDTSSNQSSEDNSENSTIPVNGVRKAIAQNMVNSVTEIP
                     HAWMMIEVDATNLVNTRNHYKNSFKNKEGYNLTFFAFFVKAVADALKAYPLLNSSWQG
                     NEIVLHKDINISIAVADENKLYVPVIKHADEKSIKGIAREINTLATKARNKQLTAEDM
                     QGGTFTVNNTGTFGSVSSMGIINHPQAAILQVESIVKKPVVINDMIAIRNMVNLCISI
                     DHRILDGLQTGKFMNHIKQRIEQYTLENTNIY"
     gene            complement(26437..27420)
                     /locus_tag="O7798_000682"
     CDS             complement(26437..27420)
                     /locus_tag="O7798_000682"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500127.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-ketoacid dehydrogenase subunit beta"
                     /protein_id="HDC2862953.1"
                     /translation="MAKLSYLEAIRQAQDLALQQNKDVFILGEDVGRKGGVFGTTQGL
                     QQKYGEDRVIDTPLAESNIVGTAIGAAMVGKRPIAEIQFADFILPATNQIISEAAKMR
                     YRSNNDWQCPLTIRAPFGGGVHGGLYHSQSIESIFASSPGLTIVIPSTPYDAKGLLLS
                     SIESNDPVLYFEHKKAYRFLKEEVPEEYYTVPLGKADVKREGEDLTVFCYGLMVNYCL
                     QAADILAADGINVEVVDLRTVYPLDKETIIDRAKHTGKVLLVTEDNLEGSIMSEVSAI
                     IAEHCLFDLDAPIMRLAAPDVPSMPFSPVLENEIMMNPEKILNKMRELAEF"
     gene            complement(27420..28412)
                     /locus_tag="O7798_000683"
     CDS             complement(27420..28412)
                     /locus_tag="O7798_000683"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500128.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine pyrophosphate-dependent dehydrogenase
                     E1 component subunit alpha"
                     /protein_id="HDC2862954.1"
                     /translation="MIDYKSLGLSEEDLKVIYKWMDLGRKIDERLWLLNRAGKIPFVV
                     SGQGQEATQIGMAYALEEGDITAPYYRDLAFVTYMGISAYDTFLSAFGKKDDVNSGGK
                     QMPSHFSSRAKNILSQSSPVATQIPHAVGAALALKMDGKKKIATATVGEGSSNQGDFH
                     EGLNFAGVHKLPFVCVIINNKYAISVPDSLQYAAEKLSDRALGYGIHGEQVDGNDPLA
                     MYKAMKEARDRAISGQGSTLIEAVTSRMTAHSSDDDDQYRTKEERETLKKADCNEKFK
                     KELLSAGIIDDAWLAEIEAEHKDIINKATKAAEDAPYPSVEEAYAFVYEEGSLN"
     gene            complement(28428..29849)
                     /gene="lpdA"
                     /locus_tag="O7798_000684"
     CDS             complement(28428..29849)
                     /gene="lpdA"
                     /locus_tag="O7798_000684"
                     /EC_number="1.8.1.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500129.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydrolipoyl dehydrogenase"
                     /protein_id="HDC2862955.1"
                     /translation="MSEKQYDLVVLGGGTAGYVAAIRASQLGKKVAIVERQLLGGTCL
                     HKGCIPTKSLLKSAEVFQTVKQAAMFGVDVKDANVNFENMLARKEDIINQMYQGVKHL
                     MQHNHIDIYNGTGRILGTSIFSPQSGTISVEYEDGESDLLPNQFVLIATGSSPAELPF
                     LSFDHDKILSSDDILSLKTLPSSIGIIGGGVIGMEFASLMIDLGVDVTVIEAGERILP
                     TESKQASQLLKKSLSARGVKFYEGIKLSENDINVNEDGVTFEISSDIIKVDKVLLSIG
                     RKPNTSDIGLNNTKIKLSTSGHILTNEFQQTEDKHIYAAGDCIGKLQLAHVGSKEGVV
                     AVDHMFEGNPIPVNYNMMPKCIYSQPEIASIGLNIEQAKAEGMKVKSFKVPFKAIGKA
                     VIDSHDTNEGYSEMVIDQSTEEIVGINMIGPHVTELINEASLLQFMNGSALELGLTTH
                     AHPSISEVLMELGLKAESRAIHV"
     gene            complement(30000..31679)
                     /gene="recN"
                     /locus_tag="O7798_000685"
     CDS             complement(30000..31679)
                     /gene="recN"
                     /locus_tag="O7798_000685"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500130.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA repair protein RecN"
                     /protein_id="HDC2862956.1"
                     /translation="MLQTLSIKQFAIIEELEIQFSDGLTVLSGETGSGKSIIIDAIGQ
                     LIGMRASSDFVRHGEKKAVIEGIFDIDESKDAIHILKNMDIDVDEDFLLVKREIFSSG
                     KSLCKINNQTVTLQDLRKVMQELLDIHGQHETQSLLKQKYHLTLLDNYAESRYQDLLD
                     KYHQTFQNYKAKKQELEDLESADQALLQRLDLMKFQLEELSEAHLKEGEIEQLEIDIK
                     RIQNSEKLSLALNNAHMTLTDENAITDRLYELSNHLLTINDIVPNKYDKLKEDIDQFY
                     YILEDAKHELYDEMANTEFDEQVLNEYESRMNLLNNLKRKYGKDISELIAYQEKLNNE
                     INKIENYEQSTSQLREEINALYNQVIEVGQALSKQRRIVARELRDHIVSEIQNLQMKD
                     ANLEISFKKLEEPNIDGIEFVEFLISPNKGEPLKSLNKIASGGELSRIMLALKSIFVK
                     SRGQTAILFDEVDSGVSGQAAQKMAEKMRDIAEYIQVICISHLPQVASMSDHHLLISK
                     SSKDDRTTTQVQELISDDKVDEIARMISGASVTDLTRENAREMIQHNQRRR"
     gene            complement(31695..>31909)
                     /locus_tag="O7798_000686"
     CDS             complement(31695..>31909)
                     /locus_tag="O7798_000686"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500131.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="arginine repressor"
                     /protein_id="HDC2862957.1"
                     /translation="LMDSFVNIDGTDNLLVLKTLPGNAQSIGAILDQINWEEVLGTIC
                     GDDTCLIICRSKEASDEIKSRIFNLL"
BASE COUNT         9970 a         5930 c         4482 g        11527 t
ORIGIN      
        1 tatctgcaaa atttttattt tcattttctg agatgttaaa actttcattt aaaaagatta
       61 cgcattctgc taacatacca cttgtttcac cagtaatcag tttactcaac gcatcaagat
      121 tttctaaatt aagtttaatt aaagttcctc ttccagaacg tgcaatcgaa tctcctgtcc
      181 aaacatttat tggaattcgc ccatccatat ctaatgttat gttaatagtc ttttttactt
      241 ttttccattt ttaatttctg tatcttttac cgactttatt ttgattagtg gtacagtatc
      301 gtatgtgtta tcttttctat ttaacttcct tttataacct acatggctgt ctattaaagt
      361 atctaacctg ggcacaccat cattaatgtt aacgcgtttt cctggcatat ctttgatgaa
      421 tggatcttgt aaccatgtta ataaatcgtt ggtactatta aaactaatca tattatcaaa
      481 gcgtggtcta gcaaatttct gccaagcagc ataaggaatc attgctgagt cagtagcaac
      541 aactttttca ttcggatgtt tcgctccttg atattttgct cctgcaccgc cttccgaatt
      601 accgccatcc gccacaatgg ttttgttttt gaagttactt gattccattc tatatttttt
      661 taaaaaatca ctatttgata atctatctgc atcttctaac tttattttat attgatttga
      721 taattgatct gtttgcttta aataatctgt gctttcatta tcattattca ttaatttagc
      781 attttggagc caatcatctc caaaccccga tgattttaat ggattatttg gattaattgc
      841 ctcattagat gttccttgat aaattattgt ctgttgacca gttggtttac ttttatcatc
      901 taataactca tatattttaa tatcagcagc accattcaaa ttactattct tatcatcatt
      961 ataactgtct acttgtttaa acctttttcc attaacttta aattcttttt ttatatcaat
     1021 attttgataa acccagtaac tacttaattc tgttaaatcc ctatcattaa ttttattcat
     1081 ctttactgtg caccccatat tctattggac gattatcatc ataaaaggct ttcttagtat
     1141 taatagtggg tttccctatt tgtattgtga ttgtagattt atctggttta ttttttaaat
     1201 tatataattt atcacttagt tcgattacat catctactgt attgtcttta gtaaagtttt
     1261 tcttagtaga aaaaagtgta gcaacagcat ctgtatttgc agcgtaattc acttcttttc
     1321 ttgctcgttc cattccttct ttaaattctt tatcattttt tcgaatcagt ggttcataat
     1381 actttcgata ttcttttaaa cttctagaag agtatgtaat ataaaaatat tcatttttat
     1441 atccgacatt ttgtgtcttg ttaattgcct cttttgtaaa gcctgtatat tgatatttct
     1501 tttcattttc tttgaagaat ttatataagt tatcatactt ttctttttgc gctcgatatt
     1561 caaagccact cagcactgta cccaccatca tactcatatc atcaccattg tcattactgc
     1621 gcattgatcc tttttgatgg atggcatctt tgtacaaagg tagacttgca ttaaatacaa
     1681 tgccatgatc ttcacaatgc acataaactt ctacaccatc atctttacct acaacatttg
     1741 tagctttaac ttttagtcca aagttatctt taaagaattg ttcacctact ttttcaaatt
     1801 ctttacgatg cttcttcgca aattcaatca catttttttc tgcaggcggt tggaagcctt
     1861 ggcctacata ttttgaagct tccatttctt ctggtacaga ttttgtttct gtttttgtgt
     1921 ctttttttga ttcattttcc atcgtggaac atccccctaa aattaatgtc gtagctaaaa
     1981 ctgatccaat gaattttttc atatgacacc tcgaataatt taattaatac aatatatcta
     2041 tattttaccc tatttttata atcaaataaa taactttatc aaactttata tttttgtata
     2101 aattagtaat atatttaata gttgatattc gcaaaaaccc taagttctaa tccacataca
     2161 aaattcccca catcaatcaa aaaacgcatg ctataaatta gagtctctaa tcaataacat
     2221 gcgttctgaa ataactatat tcaattttat tctggttttg gtagtttaat aataaatgtt
     2281 gtgcctttcc ctaattcgct tttaacatct atggaaccac catgctcttc gataatcatt
     2341 ttacaaatga acaaacctaa accggtacct tgtttacctc gcgttctcgc tgcatcaact
     2401 ttataaaaac gatcaaatac ttgttgtaaa tgttctggtg caatgcctgt acctgtatct
     2461 ttaatgtata aaatatcttc gctttcattt tcatcacaag taattgcaat ttcatctcca
     2521 ggtttcgtat aacgtgatgc attatcaatt aagttcgtta gtacttggtc catgcgatcc
     2581 atatcataac tccaaacacg cttcttacaa taattaaaag tcatatttag acctaaatca
     2641 tcagcttgtt ggcgatactt aattttcatc ttatctagta acgctgcaat aggctgaact
     2701 tctttattta cggataaccc ttcagtatcc atgcgtgcga catttaacaa ttcattaact
     2761 aaacgattta aacgtttcga ttcatcaagg acaatggcaa gcgattcttt tatttcatcc
     2821 ggttctgtaa caataccatc tacaattgat tcagtataac cttgaagtaa tgatatcggt
     2881 gtacgtaatt catgtgatac attagcaatg aaatctttct tcatttgatc tagattgtgc
     2941 tcattagtca tatcacgaac tgtcacaaca acaccacttt tacctccctg ttcaatcttg
     3001 tcgatatagc ttgtggtcac aacaaagaat cgtgcattca tttctaaatc gcgcatttca
     3061 gtttgttttg atttaaaagt atcttctatt tgtcttaata agaaagcttt agcatcttca
     3121 tcaatattgt ccataatatc attcgccatc ttattagata agataatttg tcgactctca
     3181 ttaataccta ggacaccttc taccatagag ttaattaagc tgtctctaat atttttagat
     3241 gtggataatg cgtcgacatg ctcttcgatt tctgtactca tctgattaaa tgcctgcgat
     3301 aattgaccaa tttcatcttt cgttgtgaca gaaggtttat aagagtaatc cccttcagat
     3361 acacgtgtag cttggtctct taaacgtctt aaaggttttg taattcttga cgataagaaa
     3421 aacgcaaaga ctgttgtaat tgttaagaaa ataacagccg taattatggt gataatcgta
     3481 atagcattat ttgtatcttc gattgatttc aagtctttat atataaagac tccactatat
     3541 ttgctatgac tattcttctg tgcttttgtt ggatagccta acaaaatata tgtttgagat
     3601 gagccctttt ctttaatcgt tacatttcga gtaacagatt tacctttatc aaacacatcg
     3661 tcaaaatggt cgttgttgac tacttcattc aacatttgct ttttaatatt agaaagtgaa
     3721 gccgttgatt gacgatgttt attatttata atcatcaacc caccaggatt ttcaattaat
     3781 gtttgactat attttattgc ttcttcttta ttatgtgatt gttcgaccag tgaacttata
     3841 cgtctagcat cttctcttat ggcattttcg gtttcttgtg tgaaatagta ttgcataaag
     3901 gtaattaaag caatacttaa taaaattaaa actgtcgtca ctattaaaat aatagttaac
     3961 cacagtttaa ttacgacact atttagccgg ctcatcatta gatttaacct caaatttata
     4021 cccaacgccc cagactgttt gaatcatatg cgcagcttca ctagacacac gatttaactt
     4081 ttctctaagt cgtttaacat gagtatcaac tgttcttaaa tcaccataga attcataatg
     4141 ccaaacttct tttaataatt gttcacggtc aaatacttta tttggtgttt tagctaaata
     4201 tattaataat tcgtactctt taggagtcaa attaacttct tgattatcag caagtacgcg
     4261 atgtgcatca ttatctattt ctaaatgttt aaattcaatc acatcacgtg cgtgaggttc
     4321 gctttgttct acagttgtag attgcgttct tcttagaagt gctttaactc ttaagactac
     4381 ttctcttggt gaaaatggtt tgacgatata atcatctgca ccagattcaa aaccttcaac
     4441 acggtttgtt tcttcacctt tagcagtcaa cataataatc ggtgtttgtt tatgttcacg
     4501 caatttagtt gccacctgga taccatccat ttcaggcaac attaaatcta gtagtatgca
     4561 agcataatta ttctccattg caagttcata agcctcttgg ccattacttg cttcatggat
     4621 ttcaaaagat tctctttcta aatacatttt aagtaatctt ctgattctat cctcatcatc
     4681 tacgataagt atttcgttcg acatacaggt catacctccc acacatgctt ttctttacaa
     4741 aagtattata tcacaggaaa gcgcatacag ttattaaaaa cctaaaattt tgtgaaaaaa
     4801 ttctcaaact ttgtgataaa tacatatttt atttaattat ttcccatgtt ctgctaaatg
     4861 acgcatcact tttacttcat gaggcgtcaa tacacgtcct tcaccagcat tcaaaccgac
     4921 aacatttaaa ggcccatatt caatacgaga cagtttcgtc acttgatgac caaaatgttc
     4981 gaacattctt ctgacttggc gattacgacc ttctgtaatt gtaatttcaa ccaatgttgt
     5041 gtttttatct ttatcttgtt tcttaacttt cacttcagcc ggttgcgtca taccatcttc
     5101 taattcaata cctttttcta gcgctttcac ttcttctctc attaaataac cttttaattt
     5161 cgcaacatat tttttcttaa tttgatatct tggatgtgtc attaaattag taaattcacc
     5221 atcatttgtg agtaataaca atccagaagt atcatagtct aaacgaccaa caggataaat
     5281 acgtgcttct atatctttaa agtaatctgt aaccactgta cgtcctctat catcagatac
     5341 acttgttatc acttgagttg gtttatggaa taaaatgtaa attttgtctt ctagttctat
     5401 tttaatacct tcaacttcaa tcgtatctga tggcttcact tttgttccta attcagtgac
     5461 agtcgtacca ttcactttca cttttccttc agaaattaaa gtttctgcct tacgtcttga
     5521 agtataaccg ctattagcta tacgtttttg taatcgttct aattctttag tcattatttt
     5581 ctcctttttg attgactaga ttactgaaaa aagcatccat ttcttcatcg tcttcttcag
     5641 ttgtcggcaa atcttctata ttggaaatac caaatacatt taaaaataaa tcagtagtaa
     5701 ttaactgttg gctacgctgt tcattaacca ctttagcctc aactagtcct ttggcaatca
     5761 atgtcttaac tgcaccatct gaattgatac tacgaattaa ttcaatatca cttcttgata
     5821 atggctggtt ataagcaata attgatagta cttccattgc tgcttgtgat aatttcattt
     5881 gtgacttttg ttcaattaat tgttcaatat acgttgccgc ttctttttta gtcgttaaaa
     5941 catacgtcat tccaaatcgt tgtatcatta atccatgtga tgaataattt tcaattaatt
     6001 caacgagttg gtctttcgac atatctaata tttctaatag ttgtttttca tctaaacctt
     6061 catcgccagc tgtaaataaa agcgactcta atataccatg attatccaaa atggtagttc
     6121 actcctctaa taatgttaat atcttcaaaa ttacgttgtt gctcaatatt aattattcct
     6181 gcttttgaca tctctaaaat agctaaaaag tgagtgacta cttgttcaat tggctcagaa
     6241 aacgtaaaca gactaaagaa gttaaaatga tctttatctt tcaatctcga tgtcacttgt
     6301 tctgtagctt gttgaatggt aaatgtctct tttcggattt caacagattt aggtgtattt
     6361 aactcaactc tatttttaac tctttgataa gctacaatta attcagttaa atcaatcgta
     6421 tgatttggat cccaagattc atctgtttcc aaatgagata aatctgtcgg tctttttgta
     6481 aaataaaaat ctctttcttc tttcatgtca tttaaaatag cagtatattc tttataattt
     6541 tgatattcta ttaaacgccc aactaaatct tcccgtgggt catcatcaac atccatatct
     6601 gatgttgatt gtggtaatag catcttactt ttaatcatta agagttctga cgctaatact
     6661 aggtattcac ttgcaatatt aatttcaagc tgtttcattg catgaacgta ctgcatatac
     6721 tgctctgtta atgcttgcat aggaatatca taaatatcta tttcaaattt ttggataaga
     6781 tgcagcaata aatctaatgg tccattgaaa gcatctaatt taacttcata cataatatct
     6841 acctcgtatt gcgtcatatg tgcataattc tctaaaatat tatagcatga aaataactta
     6901 cttttaaatt ggggtgataa caaaatgcaa caggcactga taaatttcta ttatcaattt
     6961 catactaagc aacattattt cctatgtcat gacattttag aagatgcatg gaaagctgaa
     7021 aataactaca gtaagcaaga tgcagttgtt agtttaatct tgtttgcaac tgcttgttac
     7081 cattatcgcc gcaataattt aaaaggcgcc tataagtctt ttaataaatc taaagaaata
     7141 atacaaaatg ctaaagatag agatgcgtta taccttaatt taaatgatta tcagttgtta
     7201 attgagcaac agattgcaaa attgaatgca gcaaagcctt tttcatctgt tatattacca
     7261 ataactccag tctttgaacg catcatcaag gccaactatc cagactatga ttataatcag
     7321 gaaacagcaa cagatccttt tattgtagac catcacatgc gccgtgatcg ttcagaagtg
     7381 attgcagcaa aagaagaagc gattcaatta agaaaacata gacgtaatta atcaaccaat
     7441 ttaaaaaagc cacaatagca cagacatttt tagtcatgtg tattgtgact tttgagttat
     7501 tgttcacttt atgctctagg atgaaattgg ttatacattt ttctaatttg agatttcgaa
     7561 acatgtgtat agagttgggt agtagatatg tcagagtgac ctaacatctc ttgcactgct
     7621 cttaaatctg cgccattttc caataaatgt gtcgcaaaag agtggcgtaa cgtatgtggc
     7681 gttaacgtct ttttaatgtt tgcctttaca ccattttgtt taatcatttt ccatattgct
     7741 tgtcgtgata aaggtttacc atgcatattt aaaaataaga cttcagtaac agtctttttt
     7801 aaaagttgcg gtctaatcgt ttcaatataa gtagttaagt actcaatgac tgcgtcgcct
     7861 aatggtacaa ttctttcttt atcgccttta ccaaatacgc gtacaaatcc cattattaag
     7921 ttcacgtttt ctaactctaa atgtatcaat tcagatacac gcattcccgt tgcgtacaga
     7981 agttctaaca tcgtacgatc acgatatcca ttaattttat ttaaatctgg cgtttctaat
     8041 aaagccaaca cttcgtcaac atttaaaacg tcaggcaatt ttttgtcata ttttggtgaa
     8101 tctaataata ccgttggatc tttcgccgca tatttttctc ttatagcaaa ttgatgaaaa
     8161 ctacggattg ttgaaataaa tcgcgcaata gatttagcag attgcccttg gtctattaaa
     8221 tgccccaaac actcttgaat taattgtcga tctataaaat caatatgcga gatatgatgt
     8281 tcagtcatat aatcttgata ctttttcaaa tcacgtctat aagcaccaat tgtgttagaa
     8341 cttagtcctt tttcaatttg tataaaacgc aaatattctt caataattgt ttccataacc
     8401 acacctctaa aaaaagcgaa ggttaattta acctacgcaa tttactatcc tttaccttta
     8461 gcttggcacg tttcacacac accatggaaa gttaaacgat gatctaaaat tttaaaattg
     8521 aactcatttt caactcgatt ttcaacttct ggtaacaaat cttcatcgat ttcatctaca
     8581 cgaccacatt ccatacatac taaatgatgg tggaaatgtt ttgcgccttc ttttcttaaa
     8641 tcaaaacgag cgacgccatc accaaagtta attttgtcga caacttttag ttcagctaac
     8701 aactctaacg ttctgtatac tgtcgccaag ccaatttcag gcgctttatc ttttactttc
     8761 agatatacgt cttcagcact tagatgatct ttttcatttt caattagaac tctaacagta
     8821 gcttcgcgtt gtggcgttag cttatatgat gattgttgta attgttgctt aacgcgattt
     8881 aatcgttctt ccaacgatgt ccactcccct actaataatt aaaatcatta caaattattt
     8941 caaacttcac aattaaaact aacagttttc tcaataaaat gcaagctttt ctcatttgtt
     9001 atttagaatg attataattt aataataggt gttgcaatgc aatgatagtc ttcgcatctt
     9061 ctatttcttt attcattagc atcgatttaa cattctcaat cggaacttta atgacttcga
     9121 caaattcatc ttcatctaag tgaactgtgc cttcttctaa attatccgta aaatatattg
     9181 ataattgttc atcgcaaaaa cctggtgaac catacatatc tacaacatgt gttaactctt
     9241 tggcaatata tcctgtttct tcttctaatt cacgttttgc cgcttcgact ctatcttcat
     9301 catcttctaa tttaccagct ggaatttcta gcaatggttt ttctactggt ttacgatact
     9361 gtttcactaa tacgacttct tttttaggtg tcactgcaca aacagcaact gcaccattat
     9421 gataaactaa ttctcttgtt gacgtttcac cgtttggtaa tgtcactgta tgaatttcta
     9481 catctacaat tttgccatta taaataactg ttcgatcaat tgttttttca tttaaatcca
     9541 ttataatcac gttcctttaa attcatatta tatattgata cactatgctt gttagctaaa
     9601 gtgtatcgaa aggagaacag acatgcaaaa aaatatatta aaaagtggta tttcattatc
     9661 tgaattaggt ctaggttgca tgagtttagg tacagattta aaaaaagccg aacaaattat
     9721 agattgtgct gttgaaaatg gtatcactta ttttgataca gcagatatgt acgataaagg
     9781 tataaatgaa tcagttgttg gtaaggcact tcttaaatat caacaacgcg atgatatttt
     9841 tattggtaca aaagtaggca atcgtttaac aaaagatggc agtacaacat gggatccgag
     9901 taaatcctat attaaagagg cagttaaagg ttcactaaag cgtttaggta tcgatcatat
     9961 cgatttatat caacttcatg gcggaaccat tgatgaccca ttagacgaaa caataagcgc
    10021 atttgatgaa ttgaaacaag aaggaattat acgtgcttac ggtatttctt ctattcgccc
    10081 aaatgtaatt gattattatt taaaacatag tcaaatcgaa acgataatgt ctcaattcaa
    10141 tttgattgat aatcgtccag aatcattatt agatgcaatt cacaacaatg atgttaaagt
    10201 attggcaaga ggacctgtgt ctaaaggatt attaacttca aacagtgtta atgtgctcga
    10261 caataaattt aaagatggta tttttgatta ttctcatgat gaattgggtg aaacaatagc
    10321 ctctattaaa gaaattgaaa gtaatttatc tgcattgaca tttagttatt taacatcaca
    10381 tgacgtgctt ggttccatca ttgtaggtgc aagtagcgtc gaccaattaa aagaaaatat
    10441 tgaaaactat catactaaag ttagtttaga tcagattaaa acagcaagag ctcgtgtaaa
    10501 ggatttggaa tataccaatc atttagtgta gaagtcattt tcagtaataa aaacagcagc
    10561 atgaggcgtt tcattataaa aatgccttac tgctgttgtt tatgtacaat tcgctataat
    10621 ttatgattat gattactcac ttatgataga aattaaagcg ttgtcctcac gcatcagtat
    10681 ttagtaattt cgccttgcgg cattgcctta agcaaacttc tgccacttca tctcttaata
    10741 attttattaa aacatctttc tatatttcac ttcgcatgtt gattcatcat tattagttat
    10801 tatttgtaca cccagcacat ttccttgcaa cacaagtagt ttgaattttt cacaagtata
    10861 atataatgta ccgtctgaaa tttggtctac agaaatatcg cctaaaatat ccagcactgt
    10921 aaattcttca aatactgata gttgttccgc atatcgtaca caaagtctta ccacactctc
    10981 cgattgacag ttcattgcca tcccacctat ttatgcttta tttttaaata atttagggaa
    11041 acatcgttca aaaaatctag gcgcaatttg atacattttc aacgcatgat gcatccattt
    11101 aggccgatta atttccaatt gttttgtttt aatgccataa atgatatctt ctgcaagctg
    11161 attagcatca agcataattt cccccatctt tttagcatac ttcattgatg ggtcggcttt
    11221 ttgatgaaaa ggtgtatcaa tcgggccaac attaactgtc atgatatgta agtttggtga
    11281 ctctagtctt aaagcattca ttaatgcata aaaccctgct ttcgatgccc cataatgtgc
    11341 agcatttgct tgtgtggaaa atgcagcttg acttgaaata cctacaatat gtgcgttaga
    11401 tgttaaatat ggtctcaaca cagtatataa aacattaaaa ctaattaaat taagctgata
    11461 cgtttcaatc atttctgaaa aactatggtc tgaaatagat ttgaaataac ctaaacctgc
    11521 actataaatg aatccatcga atgatgtatt gtcttcaaat tgcagtgcct gtatcgactt
    11581 caaatcattt aagtcacaag gaataacatt tatagttttc cccaattcct gttcaaagat
    11641 tctagttgct ttatcaacat cacgcaccaa caacgttaca tgcactttat tttctagtaa
    11701 ctttcggaca atcgataaac ctaaaccact cgtaccacca gtcactataa aatgttgtcc
    11761 tttcatcaat taaccttcct tttcaattat atagaatgca atttatcaac tttacataat
    11821 tgagacaagt tgattatctt tcctaatata tatacaataa taagaaaata taacatacaa
    11881 atcaaaaact aaagggatgt gacgttaatg aaactcgtat tttatggagc tggtaatatg
    11941 gcacaagcta tatttacagg aattattaac tcaagcaact tagatgccaa tgatatatat
    12001 ttaacaaata aatctaatga acaagcttta aaagcattcg ctgaaaaact aggtgttaac
    12061 tatagttatg atgatgcgac attattaaaa gatgcagatt atgtattttt aggtaccaaa
    12121 ccacatgact ttgatgctct agcaacacgc atcaaaccac atattacaaa agacaattgc
    12181 ttcatttcaa ttatggcagg tattccgatt gattatatta aacaacaatt agaatgccaa
    12241 aatccagttg ctagaattat gccaaacaca aatgcgcaag ttggacactc tgttactggc
    12301 attagttttt caaacaactt tgaccctaaa tctaaagatg aaattaacga tttagttaaa
    12361 gcatttggtt ctgtaattga agtatcagaa gatcatttac atcaagtaac agctatcacc
    12421 ggaagcggcc cagcattttt atatcatgta ttcgagcaat atgttaaagc tggtacgaaa
    12481 cttggtctag aaaaagaaca agttgaagaa tctatacgca accttattat aggtacaagt
    12541 aagatgattg aacgttcaga tttgagcatg gctcaattaa gaaaaaatat tacctctaaa
    12601 ggtggtacga cacaagctgg ccttgataca ttgtcacaat atgatttagt atctattttc
    12661 gaagattgtc taaacgctgc cgtcgaccgt agtattgaac tttctaatat agaagaccaa
    12721 taaaaacaaa cccgccaaca catgtatgca tcatcgcaag cactgtgttt gacgggttat
    12781 ttttataatt tattgttatt tggcaagcat tgtttattac tttgtcatta gattttaaaa
    12841 ctatcaaaat cttttacaaa attaaaatta ggtgtatctt cattttgtat caatgtttga
    12901 taaatttcat ttatatcttc tgtattatag cgattgctca aatgtgtaat caacgtacgt
    12961 ttaacattgg cttcttttat caatgcaaat acgtcttcaa tatggctatg atgataattg
    13021 ttggctaaat gcttttcacc atctatatag gtcgcttcat gtaccatcac atcagcatct
    13081 ctagaaatca cacgttcatt agaacatggt tttgtatcac caaaaattgc tacaactgga
    13141 ccctgtttgg actcacctct aaaatctttt gattgataaa cttgaccatt atgttcaaat
    13201 gtatcatgag attttacttc ttgatattta ggacctggtt caagaccaat gttttttaac
    13261 gcttcaacat tgattgtacc tgtagtttca ggtgccatta ctctatatcc atatgatgga
    13321 ataccatgat taagtaaatg cgcctctaca gtaaaaccat catgatgata tgtcagatga
    13381 tcatcgattt caatatatgt aattggatag tttaaatgtg actctgataa attcatagac
    13441 atttccacat atgctttaat tccttttggt ccaaccaatg taagcggctt ctgttcaccg
    13501 ccctgaaaag aacgactaga aagtaatcct ggcaaaccaa aaatatgatc gccatgcata
    13561 tgagtaataa atatatgtgt cacttttcct aatttaattg catgatgtaa aatttggtgc
    13621 tgtgtacctt caccaacgtc gaaaagccat atggaattgg aatatggttc taaatttaag
    13681 gcgattgctt gtgtatttct ctcttttgta ggcaaacctg cactcgttcc aaaaaatgta
    13741 acttccatat atgcccctcc ttttcttcaa ttcattttat cataaaattt gtatcaattt
    13801 agttttaatt tatacttgaa tcaaaatctg ttaaaaattc gtctttgcta gttaattttt
    13861 ctaactttaa cgtagacata actatataaa ttttgataat tacgttatac ttatcattaa
    13921 taagtatcac attaaacatg atacatgaat cgatatttca tttaagacac tgcatacagt
    13981 cgagcatatt gtatgaccta ctgaatggat tatcttataa taataaatca tatatctaat
    14041 taagaattga ggttttaatc ttgagtacta aaaacaaaca catcccatgt ttaatcacaa
    14101 tctttggtgc aactggtgac ttaagccatc gtaagttgtt tccatcaata ttccatctct
    14161 accaacaaga caatttagat gaacatattg ccatcatcgg tattggacgt cgtgacatta
    14221 ctaatgatga tttccgtaat caagtaaaat catcaattca aaagcacgta aaagatacaa
    14281 acaaaattga cgcgtttatg gaacatgtct tctatcatag acatgatgtt agtaatgaag
    14341 aaagctatca agaattacta gattttagta atgaattaga tagccaattt gaattaaaag
    14401 gtaatcgact attctattta gcaatggcac cacaattctt tggcgttatt tctgattatc
    14461 taaaatcttc tggtcttact gatacaaaag gatttaaacg ccttgttatc gaaaaaccat
    14521 tcggtagtga tttaaaatca gccgaagcat taaacaatca aattcgtaaa tcatttaaag
    14581 aagaagaaat ttatcgtatt gaccactatt taggaaaaga catggttcaa aatatcgagg
    14641 tattacgttt tgcgaatgcg atgtttgaac cattatggaa taacaaatat atttcaaaca
    14701 tccaagttac atcttctgaa atactaggtg ttgaagatcg tggtggttat tatgaatcaa
    14761 gtggcgcgct aaaagatatg gtgcaaaacc acatgttaca aatggttgca ttattagcta
    14821 tggaagcacc tattagttta aatagtgaag atatccgtgc tgagaaagta aaagtactta
    14881 aatcactgcg tcatttccaa tctgaagatg ttaaaaagaa ctttgttcgt ggtcaatatg
    14941 gcgaaggcta tatcgatggt aaacaagtta aagcataccg tgatgaagat cgcgttgcag
    15001 atgactctaa cacacctacc tttgtttcag gtaaattaac aattgataac tttagatggg
    15061 ctggtgtacc attctatatt cgtactggta aacgtatgaa atctaaaaca attcaagttg
    15121 tcgttgaatt taaagaagta ccaatgaact tatactatga aactgataaa ctgttagatt
    15181 caaacctatt agtaatcaat atccaaccta atgaaggtgt atctttacat ctaaatgcta
    15241 agaaaaatac acaaggtatc gaaacagaac ctgtccaatt gtcttactca atgagcgctc
    15301 aagataaaat gaatactgta gatgcatatg aaaatctatt atttgattgt cttaaaggtg
    15361 atgccactaa cttcacgcac tgggaagaat taaaatcaac atggaaattt gttgatgcaa
    15421 ttcaagatga atggaatatg gttgatccag aattccctaa ctatgaatca ggtactaatg
    15481 gtccattaga aagtgattta ctacttgctc gtgatggtaa ccattggtgg gacgatattc
    15541 aataattgaa ttaaaacgca catgttaaac aaaaataaat gagcgaatga caaggattga
    15601 ttacgaatca agtaaatcaa ttgttctatc attcgctttt tttctagact atattatgaa
    15661 attatatttt acaatgccca aaactatttt aataatcatt gaacaaatgg gtgtataatt
    15721 tatagaaata atgtagaata aaaataaatg attgaattaa ttggagtgaa agttttggac
    15781 gttatcaagc aaatacaaca ggcaattgtt tatattgaag atcgtttatt agagcctttc
    15841 aatttgcaag aattaagtga ttacgttggt ctttcgccat accatcttga tcaatcattt
    15901 aaaatgattg tcggcttatc tccagaagct tatgcacgcg cgcgtaaaat gacactcgct
    15961 gcaaatgatg tgattaatgg tgctacacga cttgtagata tcgctaaaaa atatcactat
    16021 gcaaattcaa atgattttgc aaatgatttt agtgattttc acggcgtatc acctattcaa
    16081 gcctctacta aaaaagatga attacaaatt caagagcgat tatatatcaa attatcaact
    16141 actgagagag caccttatcc atacagatta gaagagacag atgatatttc attggttgga
    16201 tatgcacgat ttatagacac taagtatttg tcacatcctt ttaatgttcc ggatttttta
    16261 gaagacttgc tcattgatgg taaaattaaa gagttacgac gatataatga cgttagtcca
    16321 tttgaactat ttgttattag ttgtcctctt gaaaatggtt tagaaatatt tgtaggtgta
    16381 ccaagtgaac gttatcctgc acacttagaa agtcgatttt tacctggcaa acattgtgcg
    16441 aaattcaatt tacaaggtga aattgattat gcaactaatg aagcttggta ctatattgaa
    16501 tcaagtttgc agttaacatt gccatatgaa cgaaatgatt tatatgttga agtgtaccct
    16561 ctcgatattt catttaatga cccattcact aaaattcagc tttggattcc tgttaaacag
    16621 agtccttatg acgaagatta aataataaaa aacaaagaag ccccctaata tatctatagg
    16681 tctacaaatg gccttagatt ctattagggg gcatattaat atgttaattt agttcgataa
    16741 cacatgcttc atatggacgt aactgtttta aattaacttt ggcatcataa ttaaatagct
    16801 ttacttctcc atggcttaaa tcaaatggta cagttaattc tgcttcgtgg ttagtaagat
    16861 tacctacaat aagaacttgc ttttcattta atgttctcgt gtacgcaaaa acttgtgaat
    16921 tttcagcatc tactaaatca aattgaccat atacgtatac atcattagac tttcttaatt
    16981 gaattaaatc tttataaaat tgtaatactg aatgctcatc ttctaattgt tgtgcaacat
    17041 tgatagtttt ataattcgga ttcactggga accacggttc accatttgta aatcctccat
    17101 ttaacgtatc atcccattgc attggtgtgc gagaattatc tcggttctca tctttatatt
    17161 tcgcaagtaa agcgtctaca tctccacctt gagctttcac tatttgatag tcatttttaa
    17221 cagcaacatc gttaaacgtt tcaatacttt caaatggata attcgtcata ccaatttctt
    17281 gaccttgata aatgaatggc gtaccttgtt gcaagaaata aacagctgca tgacttgttg
    17341 ctgattcata ccaatacttg tcatcgtcac cccacgtcga tacacgtcgt ggttggtcgt
    17401 gattttcaat aaacaacgca ttccaacctt tattttcaag ttgtttttgc catctattta
    17461 atacagattt atacgaattt acatcaaagt gagaatcacc actattccac agtcccaaat
    17521 gttcaaattg gaatatcata ttaaatttac cattttcttc cccgacccag tcatcagcat
    17581 catcagggct tacaccattc gcttcaccaa cagtcataat gtcatactta cttaatgagc
    17641 gatctttcat ctcttgtaac caagtttgta tacctggctg attcatatct acatcaaatg
    17701 ctggggcata tgttttaccc tcaggtacag gtaagtcacc cgcttcaaac gtcttcttaa
    17761 tatgcgtaat tgcatctact ctaaatccat caatgccttt atcaaaccac cagttcatca
    17821 tttcaaatac agcatctcta acttccggat taccccaatt caaatcaggt tgttttttac
    17881 tgaataaatg gaaataatat tgctcagtat tagcatcata ttcccatgta gatccattaa
    17941 atatactttc ccagttgtta ggttcagagc catctggctt tggatcttgc caaatgtacc
    18001 aatcacgttt gggattgtct ttactagatt tggattctat aaaccaagga tgttcatcag
    18061 atgtatgatt tacaactaaa tctaaaataa gcttcatgcc tctatcatga acacctttta
    18121 ataaacgatc aaagtcttcc atcgttccaa attcatccat aatctcttgg tagtcactaa
    18181 tatcataacc attgtcatca ttaggtgatt taaacattgg actgagccaa atgacatcga
    18241 taccgaaatc ttttaagtag tccaatttat caatcattcc aggtaaatcc ccaataccat
    18301 cgtgattact atcattaaaa cttcttggat atacttgata tgctactgct tctttccacc
    18361 attgcttatt cattttaaaa ctcctttgct atcgctgtgt tgattttctt atttttaatt
    18421 ctgtatctat aatgacgagt tcaataacat cctgtgcttt gtttttcaat atatttaaaa
    18481 ttgctgcacc agcctgttga cctaacattc gaggcttgat gtcaatacag gtttgtggtg
    18541 gtgacgcaat ttcggttaaa taagaatcat tgaacgttgc tgtcattaca tctttcggaa
    18601 tttcaatatt aagttcatat aggacactta aaatcgctaa atgtaacata gcatctaacg
    18661 aaatgattgc ctgtttaata tttgggtcct tcaaacgcgt atgtagattt tgcatgtaat
    18721 taaaaataac ttctctttca ttactagtct caataatttg ataattaatt ttattttgag
    18781 aagctatcgt ttcaaatcct tgaattctat cttttgaaac ttcaaaattt cctttttctg
    18841 taataaatat taattcatct acaccttgtt caataacatg tcgtgtcaaa ttttcagaag
    18901 ctaatatatt atcattatct atatgtgtaa attgatgatc tatatccgat gtaggcttac
    18961 caatcacaat aaatggcatg ctttcatcaa ttaacatttg tttaatcgga tcattttctt
    19021 ttgaatagag cagtataaac gcatcaacca ttcgttgttt aatcatttta taaacttcat
    19081 ccattaaatc attcatatta tttgagactg tcgtttgtgt accatagcca tgctggttac
    19141 acgtttcaga aattcctagc aatacattga tgtagaatgg attcagtcga ataggctcct
    19201 cagacccttt taacactaaa ccaattttat atgtttggtt tgtaattaaa gttctagcag
    19261 cggtattagg aaaataattc aattcttcca taactttctt cacttttgaa attgtcgctt
    19321 cgctaatacg ttgatttcct tttataactc ttgaaactgt cgaaggagaa acaccggctt
    19381 ttagtgcaac atctttaatc gtaaccattt aatcacctcc tgttaatttc tgcattggaa
    19441 aacgcttcca accactgtat aataccagtt tagtcacact ttctaaaaaa gtcaaaagat
    19501 ttgtgcaaac gattgcataa aacgataaaa ataaaacctt catactgaaa ttcaatccga
    19561 aaatcaatat aaaggtttgt ataaatatta aaatcgattg tttagtcact aactgcaaaa
    19621 tagttacctt ggccatcttg aaaattaaat acacgttgac cattcatttc tactatatca
    19681 tgcccagtta aacctaaatc atttaatttt gagtataatg catcaaagtt tttctcttta
    19741 aacattaaag atggtgttcc taggttcact tccgggctat gcttttcaat aaattctttt
    19801 gccataatcg tcaatgacgt ttcagcatct ttggtaggtg atacttcaac tgcaacatag
    19861 tcctcagcta acggtgtttc acttacaaca acaaattcta aagtttctgt ccaaaatgct
    19921 ttcgcttttt cgacatcatc aacatataac ataacttgat ttaacttttc cataaaatag
    19981 tacctctatt tctctatagt acatgctatc ataacacagt aaatatttta ttacttcaca
    20041 aaatgcttaa aaatatggcg ggatgctttt aaggtcaagg ataatacttg tgtaattttt
    20101 tataggttgt agctactcta tcacactctc ttttatattt atcaaaagat ataaaaaagg
    20161 atagtatctt tcaactatcc tttaatcaat attattcttc aatccattgt gtatggaata
    20221 cgccttcttt atcttttctt tcgtacgtat gagcaccgaa gtagtcacgt tgtgcttgaa
    20281 ttaagtttgc aggtaaatca gcagcacggt aactatcata gtaattaata cttgatgaga
    20341 aaccaggtgt tggtacacca ttttgaacac cagttgcgac aacatcacgt aacgcatctt
    20401 gatattcagt aacgatgttt ttaaagtaag gatctagcaa taagttttgt aatcctggat
    20461 tattatcgta agcatctttg atcttttgta agaattgtgc acggataatg caaccttctc
    20521 tccaaatcat agctaaatca ccaagtttta aattccattc attatcttca cttgctttac
    20581 gcatttgcgc gaaaccttgt gcataagaac aaattttact catatataat gctttacgaa
    20641 ttttttctaa aaagtctttc ttgtcaccat caaatgatgc ttttggacca tttaattctt
    20701 tagaagcatt tacgcgctct tctttgattg aagagataaa acgtgcaaat acagattcag
    20761 taatgattgt taatggaata cctaattcta atgcgttaat tgaagtccat tttcctgtac
    20821 ctttttgacc tgcagtatca agaatttttt caactaatgc ttctttattt tcatctaatt
    20881 tcatgaaaat atcaccagtg atttcaatta aataactttc taattcacca gcattccagt
    20941 ctttgaacgt ttgagcaatg tcttcatgag acatgcctaa taattctttc atcatagcat
    21001 aactttctgc aattaattgc atgtcagcat attcgatacc attgtgtacc attttcacat
    21061 agtgtccagc accattaggt ccaatataag taacacatgt agcaccgtct tttgcctttg
    21121 cagcaattgc atcaagaata tctgcaactt tgttataagc ttcttcttgt ccacccggca
    21181 ttaatgacgg accagttaac gctccaattt caccaccaga aacgcccata ccaataaagt
    21241 tgattgcact ttgtgctaat gctttattac gtctgatagt atcttgatag tttgtattac
    21301 caccatcaat taaaatatct ccatcatcta ataaaggtaa caaactatca atcgttgcgt
    21361 ccgtagcttt acctgcttga accattaata aaattttacg tggtttttct aaagaattaa
    21421 caaattcttc caatgaatac gttggatgaa tatttttccc ttttgattct tcaaccatta
    21481 aatcagtttt ttcacttgag cggttaaata cagatacact atatccgcgt gattcaatat
    21541 tccaagctag gtttttaccc ataacggcta aaccaataac tccaatttgt tgtgtcatat
    21601 tacttacctc acttgttgat ttttcattag tattgtatca caaaatagac atacactaca
    21661 ctaaatcatt tcgaatgtcg cgcaactatt ttgattattt ctaacacttg acttgcaagc
    21721 aagttcaatg atttaatcgg cattctctca tttgttgtat ggattttttc ataacccact
    21781 cctaaaatga ctgaaggaat accaaatgta ttaataatac tgccgtctga accgccacca
    21841 gaaataattg tatttgcaga taatcctaaa ttacgagcac tttcttgtgc aattttaaca
    21901 accgcttcat tatcattaat tttaaatcct ggataacttt gctccactgt aactactgct
    21961 ttcccaccta attctgatgc agtagtttca aacacatcag tcatatgttt gacttgtgtt
    22021 tttattcttt ctggatcgtg agaacgtgcc tctgcttcta aaatgacttc atctgcaaca
    22081 atattcgtag ctgaaccgcc atgaaactta ccaatattgg cagtagttat ttcatcaact
    22141 tgtcctaatt tcattcgact aattgctttc gccgcaatat taatagcact aacaccctct
    22201 tttggcgtac ttgcatgagc cgttttgcca aaaattttag ctgaaattaa catttgcgtc
    22261 ggtgcaccta caaccgtagt accgacatca gcacttgcat caatagcata accaaagtcc
    22321 gcgtccaaca actctgaatt taattcttta gcaccaatta aacctgattc ttctccaaca
    22381 gtaatcacaa attgaatttg tccatgtggg atttgttgtt cctttatcac ttgcaaaact
    22441 tcaagcatcg ctgctaatcc tgctttatca tctgcaccta gaatagtcgt accatcagag
    22501 tatatgtagc cgtcatcttt tacaattggc tttacattaa ttgcgggtac aacagtatcc
    22561 atatggctcg tcaaatataa tttaggtact tcgccttctt cgatagtact attcattgta
    22621 cacactagat tattggcacc taatttagga tgtttagccg cttcatcttc tttaacatct
    22681 aaccctaatg ctatgaattt ttcttttaaa ataggttgga ttgttgattc attccctgtc
    22741 tcagaatcga tttgtacaag ttcaaaaaac gtattaagta atctttgctc attaatcata
    22801 atggaacccc ttttatcaaa attttcatgt acgccaaacg gtaaaaattg atgaaataaa
    22861 atgttacagt aattgacgtt acacagattt atcaggtttg taaattgtgt catattattt
    22921 tcaatttatt atatataatt attgtaactc aaactaagct ttgtcaaaaa tatattgatt
    22981 gatttttcaa agatatcgta taatgaggaa aatgacataa gcaaacttac tcatgttttt
    23041 tattatattc ctttatgatg attgctagtt atatcgtctc aagttaaaag ttttatatct
    23101 tatgtcgtaa ttattaatac aaaggttatt catttggagg cacacaaaat gcaaaataaa
    23161 gttttaagaa ttatcattat cgttatgctt gtatcagttg tattagcatt gttattaacg
    23221 agtatcattc caattttata aactatatct caactaccta tacaaaatca tacaattaaa
    23281 aatccatcca ttataaacgc atgtattaat aagttatcgt attgcaacga ttactttcaa
    23341 acatgggtca tacggatgga ttatttttta agctacttca ctatgcattt tcaatgaacc
    23401 aaattgcgat ttgatttgta aatattcttc taattcattt aatatttgaa taatacttgc
    23461 tctcgagtta agcgctttgt gtgttgttgg caatggcagt tcatccaatt tcaaacgcgt
    23521 ctcatacaaa ttgtgtaaac gcattgctgt atagtcatta ctattcacat ttagaccaat
    23581 ttctttcagc agtgacgcaa catcatttaa aagcggatct ttatgacaga tactttcgat
    23641 gagcggtttc attctcatta acaattccac ttgctcttct cgcatatcaa aataatgata
    23701 gtatgaattt tcgtttctaa caaaatgatt tttaacatct cggaacgcga tagacttcgc
    23761 ctttttaata tttaaaagta acacttcaaa ttcaatcgca atggtatctt catatttttc
    23821 acaaatataa ctatatttac taaaaatatc agcaatttgt tgctcaattt tacatttgta
    23881 ttcgtctagt tgtttgtcta aacttggcat cattaaattc attgtaaatg caatgcttag
    23941 tccaattaac agtaataatg tttcattaac aattaaatgt gcatcaattg attttgcatt
    24001 aaaaacatga agtaatataa cgcaactcgt aatgacacct tcttgtactt ttaatacgac
    24061 agttaatggt ataaataaca atacgataat accgagtaca attggactct gacctaataa
    24121 actaaatatt gctgaaccta aaaacaatac taaaaaacat gatactaatc ttgaaataat
    24181 cgcttgtagc gaatgtactt ttgtatgttt aatacataat acgactaata tggcgcttga
    24241 agcataatta tctaaaccta acagcttact aataattaca cctaaagtca tacccactgc
    24301 tgtttttatt gttctaaatc caatcttgta aggatttaac tttaacatgg gttagcgcct
    24361 cttatctttc ttcacaatat ttattgaata atgtttgtaa ttgattaatt acgttcatca
    24421 catcatgacc ttcgatttga tgtctttcaa tcatttctgt aatctttcca tcttttacta
    24481 atgcaaatga cggacttgaa ggcgcataac cttcgaagta ttcacgcgct ctttgtgtcg
    24541 cttctttatc ttgtccagca aatactgtca ctagacgatc aggtaatacg tcataatgta
    24601 aagcatgtga tgctgctggt cttgcgatac cacctgcaca accacataca gaattgatca
    24661 taactagtgt tgtaccatct tgtttaagaa ctttgtcaac atcttctgca gtagttaatt
    24721 gctcatatcc cgcagattca atttcattcc ttgcttgttc tacaacaccg ttcatgtata
    24781 aatcgaaatt catgtccata agttcaatca cctatccctt tatatttaaa ctatcctcat
    24841 tctactaatt aataacatat tgttcaataa actaatctga atcacaccta tatttagaca
    24901 caattttaac aatataccaa acattattgt gcttaaaatc atggtaacta atttgttcac
    24961 atgttttcat taatatgttt caagtatgat gtcttatttt gactttactg caaaaatgca
    25021 ttcaaccatg ttgattattg ttctttatct tttttgaata tattgcacat attttagtgc
    25081 caaaaaataa tacatccatc gacaagaaca agataaaaca agttgtcgat agatgcatct
    25141 atgttatcac taatatatat ttgtattttc taaagtatac tgttcgatac gctgtttaat
    25201 atgattcata aatttacctg tttgtaaacc atctaaaata cgatgatcaa ttgaaataca
    25261 taaattaacc atgttacgaa ttgcaatcat atcattaatt actactggct ttttaacgat
    25321 tgattctact tgtaaaatcg ctgcttgtgg atgatttata atacccattg atgatactga
    25381 accaaatgta ccagtattat ttaccgtaaa tgtaccgccc tgcatatctt cagctgtcaa
    25441 ttgcttatta cgcgctttcg ttgctaaagt attaatttct ctagctatac ctttgattga
    25501 cttttcgtct gcatgcttaa tcacaggtac gtataattta ttttcatcag caacagcaat
    25561 tgaaatatta atgtctttat gtaagacaat ttcatttcct tgccagctac tatttaataa
    25621 aggatatgct tttaaagcat ctgctacagc ttttacaaag aaagcaaaga acgttagatt
    25681 atatccttct ttatttttaa agctgttttt ataatgattt ctcgtattca caagatttgt
    25741 agcatctact tcaatcatca tccatgcatg tggaatctct gttacactat taaccatatt
    25801 ttgcgcaatt gctttacgca caccatttac tggtattgtg ctgttttcac tattgtcttc
    25861 agatgattgg ttacttgatg tatctactga tgttgatttt gtttgaactt gtttgtcaga
    25921 ttgagctgtg gtaccaccat tttcaataac tgacattata tccttcttag ttacacgacc
    25981 ttcaaatcca ctacctacaa cttgtgataa atcaatgtca tgctctgaag cgagtttaaa
    26041 tacaacaggt gaaaagcgac cattattacg tggttgattt tgtttagcag tagatgtctg
    26101 ttccactgtt gcactagctt ttttagtaga tttctgagta tgctcatcca cttttgcttg
    26161 tatctcttca gttgtttcat ttgtcttttc atcagcagtt tcaattttac agataattgt
    26221 atcaatagct actgtctgcc ccgcttcaac taaaatttct gtaattgttc ctgatatcgt
    26281 ggaagggact tcagctgtca ctttatctgt aataacttca cataatggtt catattcatc
    26341 aatatgatca ccaacagaaa ctaaccattg ttcaatggtg ccttcatgaa cactctcacc
    26401 taacttaggc attgttattt ccatgacttt ccctccctag aattctgcta attcacgcat
    26461 tttatttaag attttttctg gattcatcat aatttcattt tctaatacag gagaaaatgg
    26521 catagatggt acatctggag cagctaaacg catgattggt gcatctaaat cgaacaagca
    26581 atgctctgca ataatcgctg acacttctga cataatacta ccttctaaat tatcttcagt
    26641 tacaagtaaa actttacctg tatgtttagc acgatcaata attgtttctt tatctaatgg
    26701 ataaacagtt cgtaaatcaa cgacttcaac attgataccg tctgcagcta aaatatccgc
    26761 tgcttgtaaa caataattga ccattaatcc ataacaaaat actgttaaat cttcaccttc
    26821 acgtttcaca tctgcttttc ctaaaggtac agtgtaatat tcttctggca cttcttcctt
    26881 taagaaacga taagcttttt tatgctcaaa gtacaatact ggatcatttg attcgataga
    26941 tgataataaa agccctttag catcatacgg tgtggaagga ataacaattg ttaaacctgg
    27001 cgatgaagca aatatacttt caatactttg tgaatgatat agtcctccgt gaacaccgcc
    27061 accaaatggt gcacgaatcg ttaatgggca ttgccaatca ttatttgaac gataacgcat
    27121 tttcgcagct tcactaataa tttgatttgt cgcaggtaaa ataaaatctg caaattgaat
    27181 ttctgcaatt ggtcttttac ctaccatagc tgcaccaatg gcagttccaa caatatttga
    27241 ctcagctaat ggcgtatcga taactctgtc ttcaccatat ttttgttgca gtccttgagt
    27301 agtaccaaat acgccacctt ttctaccaac atcttcacca agaataaaca catctttatt
    27361 ttgttgtaat gctaagtctt gtgcctggcg tatcgcctct aaataagata atttagccat
    27421 tagttaagac tcccttcttc gtacacaaat gcataggctt cttcgacact tggatatggc
    27481 gcgtcttcag cagcctttgt cgctttattg atgatgtctt tatgctccgc ttctatttct
    27541 gccaaccaag catcatcgat aatgccagct gaaagcaact cttttttgaa cttttcattg
    27601 cagtctgctt ttttaagcgt ttcacgctct tctttcgtac gatattggtc gtcatcatct
    27661 gatgaatgag ctgtcatacg acttgttact gcttcaatca aagttgaacc ttgaccagaa
    27721 atagctcgat ctcttgcttc tttcatcgct ttatacattg ctaatggatc attaccatct
    27781 acttgttcac catgtatacc gtaaccaagt gctctatccg ataatttttc agctgcgtat
    27841 tgtaatgaat caggtactga aattgcatat ttattattta taatgacaca tacaaaagga
    27901 agtttgtgta cacccgcgaa gtttaaacct tcatggaagt caccttggtt tgagctacct
    27961 tcaccaacag ttgctgttgc aattttcttc ttaccatcca tttttaaagc taaagcagca
    28021 ccaacagcat ggggtatttg agttgctacc ggtgaacttt gagacaaaat attcttagct
    28081 ctactactaa agtgtgatgg catttgtttt ccaccagagt taacatcgtc tttctttcca
    28141 aacgctgata aaaacgtatc atacgctgag atacccatat aagtaacgaa agctagatct
    28201 ctataataag gcgctgtaat atcaccttct tctaatgcgt atgccatccc aatctgagtt
    28261 gcttcttgtc cttgaccact tacaacaaat ggaattttac ctgcacggtt caataaccac
    28321 agtctttcat ctatttttct acctaaatcc atccatttat atattacttt taggtcttct
    28381 tcgctaaggc ctaatgattt ataatcaatc atgttaaatc ctcctattta tacgtgaata
    28441 gctctacttt ctgctttcaa tcctaattcc atcaacactt cagagatgga aggatgtgcg
    28501 tgtgttgtta gtcctaattc taatgccgag ccattcatga actgtaacag tgatgcctca
    28561 ttaatcaatt ctgttacatg tggaccaatc atattaatac ccacaatttc ttcagttgat
    28621 tgatcaatca ccatttcgct atacccttcg tttgtgtcat ggctatcaat cactgcttta
    28681 ccaattgctt taaatggtac tttaaaactt ttaactttca ttccctctgc ctttgcttgt
    28741 tcaatgttta aaccgataga agcaatttca ggttgtgaat aaatacactt aggcatcatg
    28801 ttatagttta ctgggattgg gttcccctca aacatatgat caacagccac aacaccttct
    28861 tttgatccaa catgtgccaa ttgtaatttt cctatacaat caccagctgc ataaatatgt
    28921 ttatcttcag tttgttgaaa ttcgttcgtt aaaatatgtc ctgatgttga aagttttatt
    28981 ttagtgttgt ttaaaccaat atctgatgtg ttaggttttc taccaatcga tagcaacact
    29041 ttatctactt taattatgtc tgaggaaatt tcaaacgtaa caccatcttc gttaacattt
    29101 atatcatttt cagaaagttt tattccctca tagaatttaa caccacgtgc tgacaatgat
    29161 ttttttaata gttgtgaagc ttgtttactt tcagttggta aaattctttc acctgcttct
    29221 ataactgtta cgtcaacacc taaatctatc atcaatgatg caaattccat tccgataaca
    29281 ccaccaccaa taataccaat acttgatggt aacgtcttta atgataatat atcatcgcta
    29341 gataaaattt tatcatgatc aaatgataag aatggcaact ctgcaggcga agaaccagtt
    29401 gcaattaata caaattggtt gggtaataag tctgattcac catcttcata ttcgacagaa
    29461 attgtgccac tttgaggtga aaatatagat gtacctagaa tacgtcccgt gccattataa
    29521 atgtcaatgt gattgtgttg cattaaatgc tttacacctt gatacatttg attaataatg
    29581 tcttcttttc gtgccaacat attttcaaaa ttaacattag catctttgac atcaacgcca
    29641 aacattgctg cctgttttac tgtttgaaat acttcagcag atttaagcag cgatttagta
    29701 ggaatacaac ctttatggag acaagtacct cctaatagtt gtcgttctac tattgccact
    29761 tttttaccta attgagacgc acgtatcgca gcaacatatc ctgcagtacc tccaccgaga
    29821 acgactaaat catattgttt ctctgacatg ttcttactcc taactaatga tatatatcca
    29881 ttgaaaattt attaatacat agttttcatg tccattaatt acctatttta catgattgtc
    29941 tatttagttt gaatgcacat aaataaatcc ataaatgagt attcaacaca ctttggaaat
    30001 tatctacgtc tttgattgtg ttgtatcatt tctcttgcat tttctcgagt taaatcagta
    30061 acacttgcac ctgaaatcat tcgtgcaatt tcatctactt tatcatcgct aattaactct
    30121 tgaacttgtg ttgttgtacg atcatctttt gatgatttcg aaattaataa atgatggtcg
    30181 ctcatcgatg caacttgtgg taagtgagag atacaaataa cttgtatata ttctgctata
    30241 tctcgcattt tctctgccat tttttgtgca gcttgtccag atacacctga gtcaacctca
    30301 tcgaataaaa ttgcagtttg acctctcgat ttaacaaaaa tactttttaa cgctaacata
    30361 attctagaaa gttctccacc tgacgcaatt ttatttaaac tttttaatgg ttccccttta
    30421 tttggactga ttaaaaattc tacaaattcg attccatcaa tattcggttc ttctaatttt
    30481 ttaaatgaaa tctcaagatt tgcgtctttc atttgtaagt tttgaatttc cgatacaatg
    30541 tggtctctta actccctagc gactatacga cgctgctttg ataacgcttg tccaacctct
    30601 ataacttgat tatacaatgc atttatttct tctcgtaact gcgatgtact ttgttcatag
    30661 ttttcaattt tattgatttc attattaagc ttttcttgat atgcgattaa ttctgaaata
    30721 tcttttccat atttacgttt taaattattc agcaaattca tacgagattc atactcgttt
    30781 aacacttgtt cgtcgaattc tgtattagcc atttcatcat ataactcatg ttttgcatct
    30841 tctaaaatgt agtaaaattg atcaatatct tcttttaatt tgtcatattt gtttggaact
    30901 atatcgttta ttgttaacaa atggttgctt agttcatata aacgatcagt gatagcattt
    30961 tcatccgtta atgtcatatg tgcgttatta agcgctaagc ttaatttttc agagttttga
    31021 atgcgtttaa tatctatttc aagttgctct atttcgcctt cttttagatg tgcttcagac
    31081 aattcttcta attggaattt cattaaatct aaacgctgta gcaatgcttg gtctgctgat
    31141 tctaaatctt ctaactcttg ctttttggct ttataatttt gaaaagtttg gtgatattta
    31201 tccaacaaat cttgataacg tgattctgcg taattatcca ataatgttaa atggtatttt
    31261 tgtttcaaca aagactgcgt ttcatgttgg ccatgaatat ctaataattc ttgcataact
    31321 tttcgtaaat cttgtaaagt aactgtttga ttattaattt tacaaagact tttaccagag
    31381 ctgaaaattt cccgtttaac taataaaaaa tcttcatcta catcaatatc catatttttc
    31441 aatatatgta tagcatcttt actctcgtca atatcaaata taccttcgat gacagccttt
    31501 ttttcaccat gtcttacaaa atcagatgaa gctctcattc caattaattg tccaattgca
    31561 tctataataa ttgacttacc tgaacccgtt tcaccactta aaacagttaa accatcagaa
    31621 aattgaattt ctaattcttc aataatagca aattgcttga ttgataaggt ttgtaacata
    31681 aactcatcgc atccttataa caaattgaaa attcttgact tgatttcatc acttgcctct
    31741 ttgcttcgac aaataattaa acaagtatca tcaccacaaa ttgtgcctag tacttcttcc
    31801 caattgattt ggtctaatat agctccaata gattgtgcat taccaggtaa tgtttttaga
    31861 acaagtaaat tatcagtacc atctatatta acaaaggaat ccattaaat
//
LOCUS       DALPQQ010000017        31167 bp    DNA     linear   BCT 22-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus strain K18-6-464
            SAMD00233528-rid16434743.denovo.017, whole genome shotgun sequence.
ACCESSION   DALPQQ010000017 DALPQQ010000000
VERSION     DALPQQ010000017.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMD00233528
            Sequence Read Archive: DRR236061
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 31167)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 31167)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001543423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001543423.1
            Genome Coverage       :: 77x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/22/2022 17:09:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,811
            CDSs (total)                      :: 2,743
            Genes (coding)                    :: 2,689
            CDSs (with protein)               :: 2,689
            Genes (RNA)                       :: 68
            rRNAs                             :: 2, 4, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 4, 2 (16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 54
            CDSs (without protein)            :: 54
            Pseudo Genes (ambiguous residues) :: 0 of 54
            Pseudo Genes (frameshifted)       :: 27 of 54
            Pseudo Genes (incomplete)         :: 27 of 54
            Pseudo Genes (internal stop)      :: 10 of 54
            Pseudo Genes (multiple problems)  :: 10 of 54
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..31167
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMD00233528-rid16434743.denovo.017"
                     /strain="K18-6-464"
                     /db_xref="taxon:1280"
                     /geo_loc_name="Japan: Niigata"
     gene            complement(128..721)
                     /locus_tag="O7798_000687"
     CDS             complement(128..721)
                     /locus_tag="O7798_000687"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499444.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidylprolyl isomerase"
                     /protein_id="HDC2862958.1"
                     /translation="MANYPQLNKEVQQGEIKVVMHTNKGDMTFKLFPNIAPKTVENFV
                     THAKNGYYDGITFHRVINDFMIQGGDPTATGMGGESIYGGAFEDEFSLNAFNLYGALS
                     MANSGPNTNGSQFFIVQMKEVPQNMLSQLADGGWPQPIVDAYGEKGGTPWLDQKHTVF
                     GQIIDGETTLEDIANTKVGPQDKPLHDVVIESIDVEE"
     gene            785..1168
                     /locus_tag="O7798_000688"
     CDS             785..1168
                     /locus_tag="O7798_000688"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499443.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="kinase-associated lipoprotein B"
                     /protein_id="HDC2862959.1"
                     /translation="MKLYRFSHKTGSYGVTIVEENGDDVLVKVEQVIKHPKQGDLHNP
                     TETEGVFFHDRKALSHFEKRYTKRSQLRDFNVDVLRYEDSLQQAITDLETKIKAQQTK
                     HAEMSLASLARLKEDYSLQYKENFK"
     gene            1299..3704
                     /gene="mnhA1"
                     /locus_tag="O7798_000689"
     CDS             1299..3704
                     /gene="mnhA1"
                     /locus_tag="O7798_000689"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499442.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Na+/H+ antiporter Mnh1 subunit A"
                     /protein_id="HDC2862960.1"
                     /translation="MSLLHIAVILPLIFALIIPILYRFFKRIHLGWFVLPVPIVIFIY
                     MLTLIKTTMSGNTVMKTLNWMPHFGMNFDLYLDGLGLLFSLLISGIGSLVVLYSIGYL
                     SKSEQLGNFYCYLLLFMGAMLGVVLSDNVIILYLFWELTSFSSFLLISFWRERQASIY
                     GAQKSLIITVFGGLSLLGGIILLAIPTQSFSIQYMIQHASEIQNSPFFIFAMILIMIG
                     AFTKSAQFPFYIWLPDAMEAPTPVSAYLHSATMVKAGLYLIARMTPIFAASQGWVWTV
                     TLVGLITLFWASLNATKQQDLKGILAFSTVSQLGMIMAMLGIGAISYHYQGDDSKIYA
                     AAFTAAIFHLINHATFKGALFMITGAVDHSTGTRDVKKLGGLLTIMPISFTITVITAL
                     SMAGVPPFNGFLSKESFLETTFTASQANLFSVDTLGYLFPIIGIVGSVFTFVYSIKFI
                     MHIFFGQYKPEQLPKKAHEVSILMLLSPAILATLVIVFGLFPGILTNSIIEPATSSIN
                     HTVIDDVEFHMFHGLTPAFLSTLVIYILGILLIVTFSYWVKLLQRQPGKLTFNYWYNR
                     SANVIPNYSEKMTNSYVTDYSRNNLVIIFGALILLTFVTIFSVPFNINFKDVSPIRIF
                     EVCIVILLLSAAFLILFAKSRLFSIIMLSAVGYAVSVLFIFFKAPDLALTQFVVESIS
                     TALFLLCFYHLPNLNRYNEKRSFQLTNALIAGGVGLSVIIIGLIAYGNRHFESISKFY
                     QEHVYDLAHGKNMVNVILVDFRGMDTLFESSVLGIAGLAVYTMIKLRKKRQTQGNEVK
                     NHE"
     gene            3697..4125
                     /gene="mnhB1"
                     /locus_tag="O7798_000690"
     CDS             3697..4125
                     /gene="mnhB1"
                     /locus_tag="O7798_000690"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499441.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Na+/H+ antiporter Mnh1 subunit B"
                     /protein_id="HDC2862961.1"
                     /translation="MNRQQNDLILQFAAVIIFFMVMVFGFSLFLAGHYTPGGGFVGGL
                     LFASSLVIITIAFDIETMRKIFPLDFKILIGIGLVFCIATPIASWFLGKNFFTHVTFD
                     IPLFILEPVHMTTAVFFDFGVLCAVVGTVMTIIISIGENE"
     gene            4125..4466
                     /gene="mnhC1"
                     /locus_tag="O7798_000691"
     CDS             4125..4466
                     /gene="mnhC1"
                     /locus_tag="O7798_000691"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000402803.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Na+/H+ antiporter Mnh1 subunit C"
                     /protein_id="HDC2862962.1"
                     /translation="MEIIMIFVSGILTAISVYLVLSKSLIRIVMGTTLLTHAANLFLI
                     TMGGLKHGTVPIYEANVKSYVDPIPQALILTAIVIAFATTAFFLVLAFRTYKELGTDN
                     VESMKGVPEDD"
     gene            4459..5955
                     /gene="mnhD1"
                     /locus_tag="O7798_000692"
     CDS             4459..5955
                     /gene="mnhD1"
                     /locus_tag="O7798_000692"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499439.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Na+/H+ antiporter Mnh1 subunit D"
                     /protein_id="HDC2862963.1"
                     /translation="MIESNMLVLTLVIPVITAILLVFIGKRPIIKRYVALGGTLLTLV
                     AAIINLANVVKHGPIRVELGSWKAPYSIVFVLDIFSALLIITSIIITAIVILYSYQTI
                     GIERERYYYYFSVLFMLIGIIGAFTTGDIFNLFVFFEVFLMSSYFLLVIGSTKIQLQE
                     TIKYVLVNVVSSSFFVMGVAILYSVVGTLNLADISNKLANLSAHDSGLVNIVFILFIF
                     VFATKAGVFPMFVWLPSAYYAPPIPIIAFFGALLTKVGVYAIARTLSLFFSDNVSFSH
                     YVILFLALLTIIFGCVGAVAYANIKKIILYNVMIAVGVILVGIAMMTESGMIGAIYYT
                     LHDMLVKLALFLLIGIMIKITGTADLRQFGGLIKRYPVLGWSFFIAALSLAGIPPLSG
                     FYGKFFIVQSTFERGFYLSGVIVLLSSLVVLYSVIRIFLQGFFGQPKGYDLNNKVDVK
                     YLTTIAIVAVVITVLYGLSADYLYPMVKAGAETFYNPSTYVKAVLGGK"
     gene            5957..6436
                     /gene="mnhE1"
                     /locus_tag="O7798_000693"
     CDS             5957..6436
                     /gene="mnhE1"
                     /locus_tag="O7798_000693"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499438.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Na+/H+ antiporter Mnh1 subunit E"
                     /protein_id="HDC2862964.1"
                     /translation="MAVQLVLNFIIAVFWLFVTNSYTTNNFVLGFIFGLVLVYLLHRV
                     LPGRFYVITLYRIIKLVIIFLIELIKANFDVLKIIIKPSIKNEPGFFVYHTDLKKDWQ
                     IVLLSNLITLTPGTVVLGVSDDRTKIYIHAIDFSTKEQEVESIKTSLEKIVREVGEI"
     gene            6436..6729
                     /gene="mnhF1"
                     /locus_tag="O7798_000694"
     CDS             6436..6729
                     /gene="mnhF1"
                     /locus_tag="O7798_000694"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499437.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Na+/H+ antiporter Mnh1 subunit F"
                     /protein_id="HDC2862965.1"
                     /translation="MNHNVIIVIALIIVVISMLAMLIRVVLGPSLADRVVALDAIGLQ
                     LMAVIALFSILLNIKYMIVVIMMIGILAFLGTAVFSKFMDKGKVIEHDQNHTD"
     gene            6707..7063
                     /gene="mnhG1"
                     /locus_tag="O7798_000695"
     CDS             6707..7063
                     /gene="mnhG1"
                     /locus_tag="O7798_000695"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499436.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Na+/H+ antiporter Mnh1 subunit G"
                     /protein_id="HDC2862966.1"
                     /translation="MIKIILISLALIFVIIGALISALAAIGLLRLEDVYSRAHAAGKA
                     STLGAMSLLFGTFLYFIATQGFVNMQLIVAIIFVLITGPLSSHMIMKAAYNIKTPYTK
                     KTKVDEISEDLKDTKL"
     gene            7312..8466
                     /locus_tag="O7798_000696"
     CDS             7312..8466
                     /locus_tag="O7798_000696"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499435.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD/NAD(P)-binding protein"
                     /protein_id="HDC2862967.1"
                     /translation="MHWTIIGGGIQGTAIAQKLLSSGLTTDRLTIIDPHETFCQRFNS
                     YTNRIEMPYLRSPIVHHVHPQPFHLKQFAKQHQYTNAFYGPYQRPELTMFMDHIAHAS
                     KQYQLEDCLVQGLVQTLDKQEDKWHIKLEDGQIITTDCVVIAIGSTNIPFMPDILKDK
                     QNVNHIFEKELDQVVYDKTDHIVGSGITAAHLALKLLNHDNDKKIHLWLNKDIEIHDF
                     DADPGWLGPKNMSSFLSTKSMPERNAIVQRERHKGSMPHELYLRLKKHIKNGRINVHK
                     TPITQISGGVINTENDSVPYQQIMVATGFEQDFMSQPLIKQLIQNYDAPINECNYPVI
                     SEKLEWIPNLFVAGCFADLELGPFGRNVMGGRKAAERIEQAFLKLQQYSA"
     gene            complement(8522..8896)
                     /locus_tag="O7798_000697"
     CDS             complement(8522..8896)
                     /locus_tag="O7798_000697"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499434.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PaaI family thioesterase"
                     /protein_id="HDC2862968.1"
                     /translation="MTHLLETFEMSIDHQEDGLVVISMPVTDKVKQPFGYLHGGASIA
                     LGETACSLGSANLIDTTKFIPLGLEMNANHIHSAKDGRVTATAEIIHRGKSTHVWDIK
                     IKNDKEQLITVMRGTVAIKPLK"
     gene            complement(8915..10231)
                     /locus_tag="O7798_000698"
     CDS             complement(8915..10231)
                     /locus_tag="O7798_000698"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499433.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Na+/H+ antiporter family protein"
                     /protein_id="HDC2862969.1"
                     /translation="MINAVVIAVILMIVLCLCRLNVVISLFISALVGGLISGMSIEKV
                     INVFGKNIVDGAEVALSYALLGGFAALISYSGITDYLVGKIINAIHAENSRWSRVKVK
                     VTIIIALLAMSIMSQNLIPVHIAFIPIVIPPLLSLFNDLKIDRRLIGLIIGFGLCFPY
                     VLLPYGFGQIFQQIIQSGFAKANHPIEFNMIWKAMLIPSMGYIVGLLIGLYVYRKPRE
                     YETRKISDSDNVTELKPYILIVTIVAILATFLVQTFTDSMIFGALAGVLVFFISRAYN
                     WYELDAKFVEGIKIMAYIGVVILTANGFAGVMNATGDIDELVKTLTSITGDNKLFSII
                     MMYVIGLIVTLGIGSSFATIPIIASLFIPFGASIGLDTMALIALIGTASALGDSGSPA
                     SDSTLGPTAGLNVDGQHDHIRDTCVPNFLFYNIPLMIFGTIAAMVL"
     gene            complement(10642..12117)
                     /locus_tag="O7798_000699"
     CDS             complement(10642..12117)
                     /locus_tag="O7798_000699"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499432.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M17 family metallopeptidase"
                     /protein_id="HDC2862970.1"
                     /translation="MNFKLNNTLSNEINTLIIGIPEHLNQLERISFNHIDITESLERL
                     KHQHIIGSKVGKIYTTAFDVQDQTYRLITVGLGNLKTRSYQDMLKIWGHLFQYIKSEH
                     IEDTYLLMDSFISKYDQLSDVLMACGIQSERATYEFDHYKSSKKAPFKTNLNLISESL
                     IELDFIHEGISIGQSINLARDFSNMPPNVLTPQTFAEDIVNHFKNTKVKVDVKDYDTL
                     VSEGFGLLQAVGKGSKHKPRLVTITYNGKDKDEAPIALVGKGITYDSGGYSIKTKNGM
                     ATMKFDMCGAANVVGIIEAASRLQLPVNIVGVLACAENMINEASMKPDDVFTALSGET
                     VEVMNTDAEGRLVLADAVFYANQYQPSVIMDFATLTGAAIVALGDDKAAAFESNSKVI
                     LNDILQISSEVDEMVFELPITATERASIKHSDIADLVNHTNGQGKALFAASFVTHFSG
                     QTPHIHFDIAGPATTNKASYNGPKGPTGFMIPTIVQWLKQQ"
     gene            complement(12248..13456)
                     /locus_tag="O7798_000700"
     CDS             complement(12248..13456)
                     /locus_tag="O7798_000700"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499431.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)/FAD-dependent oxidoreductase"
                     /protein_id="HDC2862971.1"
                     /translation="MAQDRKKVLVLGAGYAGLQTVTKLQKAISTEEAEITLINKNEYH
                     YEATWLHEASAGTLNYEDVLYPVESVLKKDKVNFVQAEVTKIDRDAKKVETNQGIYDF
                     DILVVALGFVSETFGIEGMKDHAFQIENVITARELSRHIEDKFANYAASKEKDDNDLS
                     ILVGGAGFTGVEFLGELTDRIPELCSKYGVDQNKVKITCVEAAPKMLPMFSEELVNHA
                     VSYLEDRGVEFKIATPIVACNEKGFVVEVDGEKQQLNAGTSVWAAGVRGSKLMEESFE
                     GVKRGRIVTKQDLTINGYDNIFVIGDCSAFIPAGEERPLPTTAQIAMQQGESVAKNIK
                     RILNGESTEEFEYVDRGTVCSLGSHDGVGMVFGKPIAGKKAAFMKKVIDTRAVFKIGG
                     IGLAFKKGKF"
     gene            complement(13910..14269)
                     /locus_tag="O7798_000701"
     CDS             complement(13910..14269)
                     /locus_tag="O7798_000701"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499430.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron-sulfur cluster assembly accessory protein"
                     /protein_id="HDC2862972.1"
                     /translation="MPTVILTEAAAYEVKDMLKANEMPDGYLKIKVNGGGCTGLTYGM
                     GAEEAPGENDEVLEYFGLKVLVDKKDAPVLNGTTIDFKQSLMGGGFQIDNPNAIASCG
                     CGSSFRTAKVAGNPENC"
     gene            complement(14282..14518)
                     /locus_tag="O7798_000702"
     CDS             complement(14282..14518)
                     /locus_tag="O7798_000702"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499429.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YuzB family protein"
                     /protein_id="HDC2862973.1"
                     /translation="MNPIVEFCLSNMAKGGDYVFNQLENDPDVDVLEYGCLTHCGICS
                     AGLYALVNGDIVEGDSPEELLQNIYAHIKETWIF"
     gene            14835..15899
                     /locus_tag="O7798_000703"
     CDS             14835..15899
                     /locus_tag="O7798_000703"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499428.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)/FAD-dependent oxidoreductase"
                     /protein_id="HDC2862974.1"
                     /translation="MKNLVLLGGGYGNMRIMSRILTTSLPQDYTVTLVDRMPFHGLKP
                     EFYALAAGTKSDKDVRMKFPNHPQVNTVYGEINDIDLDAQIVSVGNSKIDYDELIIGL
                     GCEDKYHNVPGAEEYTHSIQTLSKARDTFHSISELPEGAKVGIVGAGLSGIELASELR
                     ESRSDLEIYLYDRGPRILRNFPEKLSKYVAKWFAKNNVTVVPNSNINKVEPGKIYNCD
                     EPKDIDLVVWTAGIQPVEVVRNLPIDINSNGRVIVNQYHQVPTYRNVYVVGDCADLPH
                     APSAQLAEVQGDQIADVLKKQWLNEPLPDKMPELKVQGIVGSLGDKQGFAYIMDRTVT
                     GRLASILKSGVLWLYKYHNG"
     gene            complement(15958..16281)
                     /locus_tag="O7798_000704"
     CDS             complement(15958..16281)
                     /locus_tag="O7798_000704"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499427.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YuzD family protein"
                     /protein_id="HDC2862975.1"
                     /translation="MEHVSVVVYGADVICASCVNAPTSKDIYDWLQPLLKRKYPNISF
                     KYTYIDITKDNDNLTDHDLQFIERIEQDELFYPLITMNDEYVADGYIQTKQITRFIDQ
                     KLVNE"
     gene            16382..16624
                     /locus_tag="O7798_000705"
     CDS             16382..16624
                     /locus_tag="O7798_000705"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499426.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NifU family protein"
                     /protein_id="HDC2862976.1"
                     /translation="MPTEDTTMFDQVAEVIERLRPFLLRDGGDCSLIDVEDGIVKLQL
                     HGACGTCPSSTITLKAGIERALHEEVPGVIEVEQVF"
     gene            complement(16887..18062)
                     /gene="dltD"
                     /locus_tag="O7798_000706"
     CDS             complement(16887..18062)
                     /gene="dltD"
                     /locus_tag="O7798_000706"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499425.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-alanyl-lipoteichoic acid biosynthesis protein
                     DltD"
                     /protein_id="HDC2862977.1"
                     /translation="MKLKPFLPILISGAVFIVFLLLPASWFTGLVNEKTVEDNRTSLT
                     DQVLKGTLIQDKLYESNKYYPIYGSSELGKDDPFNPAIALNKHNANKKAFLLGAGGST
                     DLINAVELASQYDKLKGKKLTFIISPQWFTNHGLTNQNFDARMSQTQINQMFQQKNMS
                     TELKRRYAQRLLQFPHVHNKEYLKSYAKNPKETKDSYISGFKENQLIKIEAIKSLFAM
                     DKSPLEHVKPATKPDASWDEMKQKAVEIGKADTTSNKFGIRDQYWKLIQESKRKVRRD
                     YEFNVNSPEFQDLELLVKTMRAAGADVQYVSIPSNGVWYDHIGIDKERRQAVYKKIHS
                     TVVDNGGKIYDMTDKDYEKYVISDAVHIGWKGWVYMDEQIAKHMKGEPQPEVDKPKN"
     gene            complement(18059..18295)
                     /gene="dltC"
                     /locus_tag="O7798_000707"
     CDS             complement(18059..18295)
                     /gene="dltC"
                     /locus_tag="O7798_000707"
                     /EC_number="6.1.1.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002433359.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-alanine--poly(phosphoribitol) ligase subunit
                     2"
                     /protein_id="HDC2862978.1"
                     /translation="MEFREQVLNLLAEVAENDIVKENPDVEIFEEGIIDSFQTVGLLL
                     EIQNKLDIEVSIMDFDRDEWATPNKIVEALEELR"
     gene            complement(18313..19527)
                     /gene="dltB"
                     /locus_tag="O7798_000708"
     CDS             complement(18313..19527)
                     /gene="dltB"
                     /locus_tag="O7798_000708"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499423.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PG:teichoic acid D-alanyltransferase DltB"
                     /protein_id="HDC2862979.1"
                     /translation="MIPYGDFTFFLIALIALLPVIILGFLGKRSYIYNGVVTAFMIVL
                     IFSSDKHNLFDQKYLSVQLISFIIYVVWQVLLIMFYYHSKPKNNSFSKFVTVMVLSIL
                     PLALVKVLQSTWLGGHQIHFHESKLIEFVGFLGISYVTFKSVQLIMEIRDGSIKEIKV
                     WKLIQFISFFPTISSGPIDRYKRFVKDDKKVPTGNEYRELVLKAIHMIMLGFLYKYIV
                     AYFINTYAIMPLQLDLHGFVNLWLYMYAYSLYLFFDFAGYSLFAIAFSYLFGIKTPPN
                     FDKPFKAKNIKDFWNRWHMTLSFWFRDCIYMRSLFYMSRKKLLKSQFAMSNVAFLINF
                     FIMGIWHGIEVYYIVYGLYHAALFIGYGYYERWRKKHPPRWQNGFTTALSIVITFHFV
                     TFGFLIFSGKLI"
     gene            complement(19524..20981)
                     /gene="dltA"
                     /locus_tag="O7798_000709"
     CDS             complement(19524..20981)
                     /gene="dltA"
                     /locus_tag="O7798_000709"
                     /EC_number="6.1.1.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499422.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-alanine--poly(phosphoribitol) ligase subunit
                     DltA"
                     /protein_id="HDC2862980.1"
                     /translation="MTDIINKLQAFADANPQSIAVRHTTDELTYQQLMDESSKLAHRL
                     QGSKKPMILFGHMSPYMIVGMIGAIKAGCGYVPVDTSIPEDRIKMIINKVQPEFVFNT
                     TDESFESLEGEVFTIEDIKTSQDPVIFDSQIKDNDTVYTIFTSGSTGEPKGVQIEYAS
                     LVQFTEWMLELNKSGNEQQWLNQAPFSFDLSVMAIYPCLASGGTLNLVDKNMINKPKL
                     LNEMLTATPINIWVSTPSFMEMCLLLPTLNEEQYGSLNEFFFCGEILPHRAAKALVNR
                     FPSATIYNTYGPTEATVAVTSIQITQEILDQYPTLPVGVERPGARLSTTDEGELVIEG
                     QSVSLGYLKNDQKTAEVFNFDDGIRTYHTGDKAKFENGQWFIQGRIDFQIKLNGYRME
                     LEEIETQLRQSEFVKEAIVVPVYKNDKVIHLIGAIVPTTEVTDNAEMTKNIKNDLKSR
                     LPEYMIPRKFEWMEQLPLTSNGKIDRKKIAEVING"
     gene            complement(20997..21149)
                     /locus_tag="O7798_000710"
     CDS             complement(20997..21149)
                     /locus_tag="O7798_000710"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499421.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="teichoic acid D-Ala incorporation-associated
                     protein DltX"
                     /protein_id="HDC2862981.1"
                     /translation="MKSKSKQPPNKYVEAFKPYLLTLLYLAIFITLYLIYGSGDTHNN
                     FIYNEF"
     gene            complement(21197..21307)
                     /locus_tag="O7798_000711"
     CDS             complement(21197..21307)
                     /locus_tag="O7798_000711"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499420.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDC2862982.1"
                     /translation="MMTTNYYVESIKLKLNFIMNIDIMNCKKQILKRILY"
     gene            complement(21561..22520)
                     /locus_tag="O7798_000712"
     CDS             complement(21561..22520)
                     /locus_tag="O7798_000712"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000239136.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-glycerate dehydrogenase"
                     /protein_id="HDC2862983.1"
                     /translation="MVKIVVSRKIPDKFYQQLSKLGDVVMWQKSLVPMPKDQFVTALR
                     DADACFITLSEQIDAEILAQSPNLKVIANMAVGYDNIDVESATANNVVVTNTPNVLTE
                     TTAELGFTLMLAIARRIVEAEKYVEADAWQSWGPYLLSGKDVFNSTIGIYGMGDIGKA
                     FARRLQGFNTNILYHNRSRHKDAEADFNATYVSFETLLAESDFIICTAPLTKETHHKF
                     NAEAFEQMKNDAIFINIGRGQIVDETALIDALDNKEILACGLDVLANEPIDHTHPLMG
                     RDNVLITPHIGSASVTTRDNMIQLCINNIEAVMTNQVPHTPVN"
     gene            complement(22553..23332)
                     /locus_tag="O7798_000713"
     CDS             complement(22553..23332)
                     /locus_tag="O7798_000713"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499418.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR01457 family HAD-type hydrolase"
                     /protein_id="HDC2862984.1"
                     /translation="MKQYKAYLIDLDGTMYMGTDEIDGAKQFIDYLNVKGIPHLYVTN
                     NSTKTPEQVTEKLREMHIDAKPEEVVTSALATADYISEQSPGASVYMLGGSGLNTALT
                     EAGLVIKNDEHVDYVVIGLDEQVTYEKLAIATLGVRNGATFISTNPDVSIPKERGLLP
                     GNGAITSVVSVSTGVSPQFIGKPEPIIMVKALEILGLDKSEVAMVGDLYDTDIMSGIN
                     VGMDTIHVQTGVSTLEDVQNKNVPPTYSFKDLNEAIAELEK"
     gene            complement(23332..23766)
                     /locus_tag="O7798_000714"
     CDS             complement(23332..23766)
                     /locus_tag="O7798_000714"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499417.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF86 domain-containing protein"
                     /protein_id="HDC2862985.1"
                     /translation="MYFVDKDKLTQKLAYLQALTDDYHESKHNHYAFERIAQMLIESS
                     VDIGNMIIDAFILRDPGNYKDVIDILELENVITKETQQAINKTVGIRKQFTYDYTALD
                     IKIIMPMFDDALPYYKQFITEVTTFLHQENVPVTAFGKGENQ"
     gene            23864..24130
                     /locus_tag="O7798_000715"
     CDS             23864..24130
                     /locus_tag="O7798_000715"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499416.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3055 domain-containing protein"
                     /protein_id="HDC2862986.1"
                     /translation="MIDMYLYDDNEESQVQFVGFVGEHSRYDLMLVHTNRHYGKTLVL
                     NMQTNKFGIIGTDDLKEEGYIAHILGVNAEEGDEITEYLNEVIH"
     gene            complement(24209..24592)
                     /locus_tag="O7798_000716"
     CDS             complement(24209..24592)
                     /locus_tag="O7798_000716"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499415.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YutD family protein"
                     /protein_id="HDC2862987.1"
                     /translation="MIKVDQHYFELIENYRECFNEEQFIARYSDILDKYDYIVGDYGY
                     DQLRLKGFYKDSNKKAEMSKRFSNIQDYIFEYCNFGCPYFVLRHLSKQEVKKLIEEVH
                     PSDVIDDDNKLQDVKIKPTIQDTEH"
     gene            complement(24722..25639)
                     /gene="lipA"
                     /locus_tag="O7798_000717"
     CDS             complement(24722..25639)
                     /gene="lipA"
                     /locus_tag="O7798_000717"
                     /EC_number="2.8.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499414.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoyl synthase"
                     /protein_id="HDC2862988.1"
                     /translation="MATKNEEILRKPDWLKIKLNTNENYTGLKKMMREKNLNTVCEEA
                     KCPNIHECWGARRTATFMILGAVCTRACRFCAVKTGLPNELDLNEPERVAESVELMNL
                     KHVVITAVARDDLRDAGSNVYAETVRKVRERNPFTTIEILPSDMGGDYDALETLMASR
                     PDILNHNIETVRRLTPRVRARATYDRTLEFLRRSKELQPDIPTKSSIMVGLGETIEEI
                     YETMDDLRANDVDILTIGQYLQPSRKHLKVQKYYTPLEFGKLRKVAMDKGFKHCQAGP
                     LVRSSYHADEQVNEAAKEKQRQGEAQLNS"
     gene            complement(25723..27042)
                     /locus_tag="O7798_000718"
     CDS             complement(25723..27042)
                     /locus_tag="O7798_000718"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499413.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional metallophosphatase/5'-nucleotidase"
                     /protein_id="HDC2862989.1"
                     /translation="MRLTIYHTNDIHSHLHEYERIKAYMAEHRPRLNHPSLYVDLGDH
                     VDLSAPITEATLGKKNVALLNEAKCDVATIGNNEGMTISHEALNHLYDEAKFIVTCSN
                     VIDESGHLPNNIVSSYIKDIDGVKILFVAATAPFTPFYRALNWIVTDPLESIKEEIEL
                     QRGKFDVLIVLSHCGIFFDETLCQELPEIDVIFGSHTHHYFEHGEINNGVLMAAAGKY
                     GNYLGEVNLTFEAHKVVHKTAKIIPLETLPEVETSFEEEGKTLMSNSVIQHPVVLKRS
                     MNHITEAAYLLAQSVCEYTHAQCAIINAGLLVKDIVKDEVTEYDIHQMLPHPINMVRV
                     RLFGVKLKEIIAKSNKQEYMYEHAQGLGFRGNIFGGYILYNLGYIHSTGRYYLNGEEI
                     EDDKEYVLGTIDMYTFGRYFPTLKELPKEYLMPEFLRDIFKEKLLEY"
     gene            complement(27069..27896)
                     /locus_tag="O7798_000719"
     CDS             complement(27069..27896)
                     /locus_tag="O7798_000719"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499412.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfite exporter TauE/SafE family protein"
                     /protein_id="HDC2862990.1"
                     /translation="MLLTITLLVLIGGLSAIIGSIVGIGGGIIIVPTMVYLGVEHGLL
                     HNITTQVAIGTSSVILIVTGLSSSLGYLKTKQVDIKNGSIFLFGLLPGSLLGSFISRY
                     LTFESFNLYFGIFLIFVAILLMVRNKIKPFKIFDKPKYEKTYVDAKGKTYHYSVPPLF
                     AFITTFLIGILTGLFGIGGGALMTPLMLIVFRFPPHVAVGTSMMMIFFSSVMSSIGHI
                     AQGHVAWGYAIILIISSYFGAKIGVKVNQSIKSDTVVTLLRTVMLLMGIYLIIRALI"
     gene            complement(27909..28757)
                     /locus_tag="O7798_000720"
     CDS             complement(27909..28757)
                     /locus_tag="O7798_000720"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499411.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF72 domain-containing protein"
                     /protein_id="HDC2862991.1"
                     /translation="MINIGLTGWGDHYSLYEDLERQTDKLKTYAGHFPVVELDATYYA
                     IQPERNILKWIKETPDTFEFVVKIHQALTLHADYKTFADTRQELFDQFKNMLEPLHTQ
                     KKLAMVLVQFPPWFDCNAQNIKYILYVRQQLQAFPMCVEFRHQSWFSDAFKEQTLAFL
                     TEHQIIHAVVDEPQVKDGSVPLVNRITNEIAFVRYHGRNHYGWTKKDMSDQEWRDVRY
                     LYDYNEQELIDLAQKAQILAQKAKKVYVIFNNNSGGHAANNAKTYQRLLNIEYEGLAP
                     QQLKLF"
     gene            complement(28805..28903)
                     /locus_tag="O7798_000721"
     CDS             complement(28805..28903)
                     /locus_tag="O7798_000721"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499410.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDC2862992.1"
                     /translation="MRFYFTNLIKRKHQAEDRRKILIKQKHQTKVR"
     gene            complement(28970..30037)
                     /locus_tag="O7798_000722"
     CDS             complement(28970..30037)
                     /locus_tag="O7798_000722"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499409.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitronate monooxygenase"
                     /protein_id="HDC2862993.1"
                     /translation="MWNKNRLTQMLSIEYPIIQAGMAGSTTPKLVASVSNSGGLGTIG
                     AGYFNTQQLEDEIDYVRQLTSNSFGVNVFVPSQQSYTSSQIENMNAWLKPYRRALHLE
                     EPVVKITEEQQFKCHIDTIIKKQVPVCCFTFGIPSEQIISRLKAANVKLIGTATSVDE
                     AIANEKAGMDAIVAQGSEAGGHRGSFLKPKNQLPMVGTISLVPQIVDVVSIPVIAAGG
                     IMDGRGVLASIVLGAEGVQMGTAFLTSQDSNASELLRDAIINSKETDTVITKAFSGKL
                     ARGINNRFIEEMSQYEGDIPDYPIQNELTSSIRKAAANIGDKELIHMWSGQSPRLATT
                     HPANTIMSNIINQINQIMQYK"
     gene            complement(30051..31091)
                     /locus_tag="O7798_000723"
     CDS             complement(30051..31091)
                     /locus_tag="O7798_000723"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499408.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HlyC/CorC family transporter"
                     /protein_id="HDC2862994.1"
                     /translation="MIIAIIILIFISFFFSGSETALTAANKTKFKTEADKGDKKAKGI
                     VKLLEKPSEFITTILIGNNVANILLPTLVTIMALRWGISVGIASAVLTVVIILISEVI
                     PKSVAATFPDKITRLVYPIINICVIVFRPITLLLNKLTDSINRSLSKGQPQEHQFSKE
                     EFKTMLAIAGHEGALNEIETSRLEGVINFENLKVKDVDTTPRINVTAFASNATYEEVY
                     ETVMNKPYTRYPVYEGDIDNIIGVFHSKYLLAWSNKKENQITNYSAKPLFVNEHNKAE
                     WVLRKMTISRKHLAIVLDEFGGTEAIVSHEDLIEELLGMEIEDEMDKKEKEKLSQQQI
                     QFQQRKNRNVSI"
BASE COUNT         9845 a         5566 c         4695 g        11061 t
ORIGIN      
        1 ttcttgataa atatattgag attgctcatc atattagttt atttattttc gttggaatat
       61 atactaatcc attcataaat tagctttatc cgagtttaaa atgttggtag ttaattatgt
      121 ttagatatta ttcttcaaca tcaatagatt caattacaac atcatgaagt ggtttatctt
      181 gtggtcccac ttttgtattt gcaatatctt ctaatgtagt ttcaccatca atgatttgac
      241 cgaatactgt atgtttttga tctaaccatg gtgtaccacc cttttcgcca tatgcatcaa
      301 cgattggttg aggccagcca ccatctgcaa gttgacttaa catattttga ggtacttctt
      361 tcatttgaac aatgaaaaat tgtgaaccat tagtattagg tcctgagtta gccattgata
      421 atgcgccata taagttaaat gcatttaatg aaaattcatc ttcaaaagca ccgccataaa
      481 tactttcgcc acccatacca gtagctgttg gatcgccacc ttgaatcatg aagtcattaa
      541 tgacacggtg gaatgtgatt ccatcataat aaccattttt tgcatgtgtc acaaaatttt
      601 caactgtttt tggtgcaata tttggaaata atttgaatgt catgtcacct ttatttgtgt
      661 gcataaccac tttgatttca ccttgttgta cttctttgtt taactgtgga tagttagcca
      721 tttatattct ccattcatgt tatgatacat atatattaac atacttttaa gggaggaaaa
      781 tagcatgaag ctatatcgat tttcacacaa aacaggtagc tatggtgtca cgattgttga
      841 agaaaatgga gacgatgtcc ttgttaaagt tgaacaagtt atcaaacacc cgaaacaagg
      901 tgatttacat aaccctactg aaactgaagg tgtatttttc catgaccgca aagcattaag
      961 ccattttgaa aaacgctata cgaaacgttc acaattacgc gacttcaatg ttgatgtatt
     1021 gcgctatgaa gattcacttc aacaagcaat tacagattta gaaactaaaa ttaaagctca
     1081 gcaaacaaaa catgctgaaa tgtctttagc tagtttagca cgcttaaaag aagattattc
     1141 acttcaatac aaagaaaatt ttaaataaaa aatgacgtgt ttcttcttat ttaaatactt
     1201 ctgaaaataa agcacaacaa ggagtgtgta cgtttttcag aactatatca ttcatgtata
     1261 atgaataaca taaatatttt ttaaaggagg acaacatagt gagtttgtta catattgcgg
     1321 tgatattacc gttaatattc gcactcatta ttcctatcct gtatagattt tttaaacgta
     1381 tacatttagg atggttcgta ttacctgtcc ctatcgtcat atttatttat atgcttacat
     1441 taattaaaac gacgatgtca ggtaatactg taatgaaaac cttaaattgg atgcctcatt
     1501 ttggtatgaa ctttgattta tatcttgatg gcttaggttt actctttagt ttgcttattt
     1561 caggaatcgg cagtttagta gtattatatt caatcggcta cttaagtaag tcagaacaac
     1621 tagggaattt ttattgttat ttattactat ttatgggtgc aatgttaggt gtcgtacttt
     1681 cagataatgt tattattcta tatttattct gggagctaac gtcattttct agttttttac
     1741 ttatttcatt ctggcgcgaa cgacaagcat ctatatatgg tgctcaaaaa tcgctcataa
     1801 tcacagtatt tggtggtcta tcattattag gtggtatcat cttactcgct ataccaacac
     1861 aatcatttag cattcagtac atgattcaac atgcttctga aattcaaaat agcccattct
     1921 tcatttttgc gatgatttta atcatgattg gtgcttttac aaaatctgct cagtttccat
     1981 tttatatttg gctaccagat gcaatggaag cacctacacc agtcagtgct tatcttcatt
     2041 cagcaacaat ggttaaagca gggttatatt taatcgctcg aatgacacca atcttcgcag
     2101 catcgcaagg ttgggtatgg actgtcacac tcgttggttt aattacatta ttctgggctt
     2161 cgctaaacgc aacaaaacaa caagacttga aaggtatact ggcattttca acagtatccc
     2221 aattaggtat gattatggcg atgcttggaa tcggtgccat tagttatcac tatcaaggcg
     2281 atgatagcaa aatatatgct gctgcattta cggctgcaat attccattta atcaaccatg
     2341 caacatttaa aggtgcccta tttatgatta caggtgcagt ggatcattct actggtacac
     2401 gtgatgttaa gaaattaggt ggcttactaa caattatgcc tatttcattt acaatcactg
     2461 ttattacagc attaagtatg gctggtgtac caccgttcaa tggtttctta tcaaaagaat
     2521 catttttaga aacaacattt acagcaagcc aagcaaattt attcagtgtt gatacattag
     2581 gctacctatt cccaatcatt ggtatagtgg gcagtgtctt cacatttgta tattcaatta
     2641 aatttataat gcatatattt ttcggacaat ataaacctga acaattacct aaaaaagcac
     2701 acgaagtatc aatattaatg cttttatcac cagctatttt agctacatta gtaattgtat
     2761 ttggtttatt ccctggcatt ttaactaatt cgattattga accagctaca tcttcgatta
     2821 atcatacggt aattgatgat gttgaattcc atatgttcca tggattaacg cctgcctttt
     2881 tatcaacatt agtgatttat attttaggta tcttactaat tgtgacattt agttattggg
     2941 tgaaattgtt gcaacgacaa cctggtaaac taacattcaa ttattggtac aacagaagtg
     3001 caaatgttat tccaaactac tctgaaaaga tgacgaatag ctatgttacc gattattcac
     3061 gtaataattt agttatcatt tttggtgcat taattttatt aacatttgtc actatattct
     3121 cagtaccttt caacattaat tttaaagacg ttagtccgat tagaattttc gaagtttgta
     3181 tcgtaatttt attattaagt gctgcctttt taattctttt cgctaaatca agattattta
     3241 gcatcattat gttaagtgca gttggatatg ctgtgtctgt attgtttata ttctttaaag
     3301 cacccgactt agcattgaca cagtttgtcg ttgaatctat ttcaacagca ttgttcttat
     3361 tatgcttcta ccacttacca aatttaaatc gttataatga aaagcgctca ttccagctta
     3421 ctaatgcttt aattgctggt ggtgttggtt tgtccgtcat tattatcggt ttaattgcat
     3481 acggaaatag acattttgaa tcgatatcta agttttatca agagcacgtt tatgatttag
     3541 ctcacggtaa aaacatggta aacgtcatac ttgttgattt ccgtggtatg gatactttat
     3601 tcgagtcatc tgtgcttggt atcgcaggat tagctgtata tacaatgatt aaattacgta
     3661 aaaagcgtca aacgcaaggt aacgaggtga aaaatcatga atagacaaca aaatgatcta
     3721 attttgcaat ttgctgcagt tattatcttt ttcatggtaa tggtctttgg tttttcactt
     3781 ttcttagcag gacattatac acctggtggc ggtttcgtcg gcggattatt attcgcaagt
     3841 tcacttgtta tcattacgat tgcatttgat atagaaacaa tgcgtaaaat tttcccatta
     3901 gattttaaaa tcttgatagg tatcggatta gttttttgta ttgcgacgcc tatcgcaagt
     3961 tggtttttag gcaaaaattt ctttacgcat gtcacatttg atataccgtt atttatatta
     4021 gaacctgttc atatgacaac agcagtattc tttgatttcg gtgttttatg tgcagtagtt
     4081 ggtactgtca tgacaattat tatttcgatt ggagagaacg aatagtggaa attattatga
     4141 tttttgttag tggtattctc acagcaatta gtgtctatct cgttttgtct aaaagtctga
     4201 tacgaattgt tatgggaact acactattaa cacatgcagc aaatttattt ttaataacta
     4261 tgggcggact taaacatggt actgttccaa tttatgaagc gaacgtaaaa agctatgttg
     4321 atcctatccc gcaagcactt attttaacag caatcgttat cgcctttgcg acaacagcct
     4381 ttttcttagt attagcattt agaacatata aagaattagg cacagataac gttgagagta
     4441 tgaaaggagt tccagaagat gattgaaagt aatatgcttg tgttaacgct agttattcca
     4501 gtaattacag ccatattact tgtctttatt ggaaagcgtc ctattataaa gcgttatgtc
     4561 gcactaggcg gtacattatt aaccttggtc gcggcaatta tcaatttagc aaatgttgtt
     4621 aaacatggac caatacgcgt agagctaggt tcatggaaag caccatacag tattgtcttt
     4681 gtattagaca tattcagtgc cctactaata attactagta ttattattac agctattgtg
     4741 attttatatt cataccaaac aattggtatt gaacgtgaaa gatattatta ttatttttca
     4801 gtactattta tgttaatagg tatcattggt gcattcacaa ctggtgacat tttcaaccta
     4861 ttcgtatttt tcgaagtatt tttaatgtca tcttatttct tattagtaat tggttctaca
     4921 aaaattcaac tacaagaaac aataaaatat gttcttgtta acgttgtatc gtcatccttc
     4981 ttcgtaatgg gtgtagcgat tttatattca gtagtaggaa cattgaatct agcagatata
     5041 agcaataaat tagctaacct ttcagcgcat gacagtggct tagtcaatat cgttttcata
     5101 ctatttatct ttgtttttgc tacaaaagct ggcgtattcc caatgtttgt ttggttacct
     5161 agtgcatact atgcaccacc aattccaatc attgcattct ttggtgcttt gttaacaaaa
     5221 gttggtgttt atgcaatcgc tagaacattg agcctattct ttagtgataa tgtaagcttt
     5281 tcacattatg tcattttatt cttagcacta ttaacgatca tctttggttg tgtcggtgct
     5341 gttgcatatg ccaacattaa aaaaatcatc ctatacaatg tcatgattgc tgtaggtgtg
     5401 atcttagtcg gcattgcaat gatgacagag tcaggtatga ttggggctat ttactataca
     5461 ttgcacgaca tgttagtaaa acttgcatta ttcttgctta tcggaattat gattaaaatt
     5521 acaggcactg ctgatttaag acaatttggt ggcttaatta aacgatatcc tgtacttggt
     5581 tggtcattct ttatcgcagc attaagttta gctggcattc ccccactcag tggcttttat
     5641 ggaaaatttt ttattgtcca atcaacattt gaaagaggat tttatttaag tggtgtcatc
     5701 gtcttattat caagtttagt cgtattatat tctgtcattc gcatattcct acaaggcttt
     5761 ttcggtcaac caaaaggata tgatcttaat aacaaagtcg acgtcaaata tttaactacg
     5821 attgcaatcg ttgcagttgt gataactgtt ttatatggat tgtcagcaga ttacttatat
     5881 ccaatggtaa aagctggtgc agaaacattc tacaatccat caacctacgt taaagctgta
     5941 ttaggaggta aataacatgg ctgtacaatt agtattaaac tttattatcg cagtgttttg
     6001 gttgtttgtg acaaatagtt acacaacaaa taactttgtg ttaggtttca tctttggcct
     6061 agttcttgtt tacctcttac acagagtgtt accaggtaga ttttatgtca tcacgctata
     6121 tcgtattatt aaattagtta ttattttctt aatcgaactg attaaagcta attttgatgt
     6181 tttgaaaatt attattaaac cttcgattaa aaatgaacca ggattctttg tttatcacac
     6241 agatttaaaa aaagattggc aaattgtctt gctgtctaat ttaattacat taacacctgg
     6301 tactgtagtg cttggtgtaa gtgacgatcg tacaaaaatt tatattcatg ccatagattt
     6361 ttcaactaaa gagcaagaag tagaaagtat taaaacatca ttagagaaaa ttgtaagaga
     6421 ggtgggcgaa atataatgaa tcataatgtt attatcgtta ttgcattaat catagttgtc
     6481 atttctatgt tagctatgct cattcgcgtt gtgctaggcc catcacttgc cgatcgtgtt
     6541 gtcgcattag atgcgattgg tcttcaatta atggcagtta tagcattatt cagtatttta
     6601 ttaaatatta aatacatgat tgtcgttatt atgatgattg gtatattagc ttttttaggt
     6661 actgcagtat tctctaaatt tatggacaaa ggtaaggtga ttgaacatga tcaaaatcat
     6721 actgattagt cttgcactta tctttgttat catcggtgct ttaattagcg ccctagcagc
     6781 tataggatta ttgagacttg aagatgtata ttcacgtgca catgctgccg gaaaagcatc
     6841 aacattaggt gcaatgtcat tactatttgg tacgttttta tattttattg ctactcaagg
     6901 ttttgtaaat atgcaattaa tcgttgcgat tatctttgta ttaattacag gtcctctttc
     6961 aagtcatatg attatgaaag cagcatataa tattaaaacg ccttatacta aaaagactaa
     7021 agtcgatgaa atttcggaag acttaaaaga cacaaaattg tagattatat aacaaaatca
     7081 tgaatataaa tcaacaacaa acagcagtaa gatgattcca aattaggaat gattttactg
     7141 ctgttttctt ttgacattgt tacctctttt tcaatgattt tttctttgac tacagattcg
     7201 ccctatctac atatatctct ttaatttaat tgcctttcat gtcgttatgt attatgataa
     7261 taataattat aaatcgtaac gattacgttt taaaaagaga gaggttttat tatgcattgg
     7321 acaattatcg gcggtggcat acagggaact gcaatcgcac aaaaactatt atcaagcgga
     7381 ttaacaacag accgattaac aatcattgac ccacacgaaa ctttttgcca aaggtttaac
     7441 tcatatacaa atcgaataga aatgccttat ttaagatcac cgattgtaca tcacgtacat
     7501 ccacaaccgt tccatctaaa acaattcgct aaacagcacc aatatacaaa tgctttttat
     7561 ggtccttatc aacgacctga attgacaatg tttatggatc atattgcaca tgcttctaaa
     7621 caatatcaat tagaggattg cttggttcaa ggtttagttc aaactttaga taaacaagaa
     7681 gacaaatggc atatcaagtt agaagatgga caaattatca ctacagattg cgtcgttatt
     7741 gcaataggca gtacaaatat tccgtttatg cctgacattt taaaagacaa acagaatgta
     7801 aatcatatct tcgagaaaga acttgatcaa gtagtatatg ataagaccga tcatatcgtt
     7861 ggtagcggca ttactgctgc acatcttgca cttaaattgt taaatcatga taacgataaa
     7921 aagattcatt tatggctaaa taaagatatt gaaatacatg actttgatgc tgatcctggt
     7981 tggttaggtc cgaaaaatat gtcttcattt ttaagtacta aaagcatgcc tgaaagaaat
     8041 gccattgtac aacgcgaacg tcataaagga tcaatgcctc acgaactgta cttacgcctt
     8101 aaaaaacata ttaaaaatgg tcgtataaat gtgcataaaa cacctatcac tcaaattagt
     8161 ggtggtgtaa ttaacactga aaatgattct gttccatatc aacagattat ggttgcaact
     8221 ggttttgaac aagattttat gtcacaacca cttattaagc aattaataca aaattatgat
     8281 gcacctatca acgaatgtaa ttaccctgtt atttccgaaa aattagaatg gataccaaat
     8341 ctatttgtcg caggatgctt tgcagactta gaattaggac catttggtag aaatgttatg
     8401 ggtggccgta aagctgccga acgcattgaa caagcatttc taaaactaca acaatatagc
     8461 gcataaaaaa actgctagcc gtagttatga atatctcata acatttcagc tagcagttct
     8521 tttattttaa aggtttaata gcaactgtac cacgcataac tgtaattaat tgttctttgt
     8581 cattcttaat ttttatatcc catacatgtg tcgacttacc tcgatgaata atttcagctg
     8641 tcgcagtaac acgaccatct ttagcagaat gaatatggtt agcattcatc tctaaaccta
     8701 atggaataaa tttggttgta tcaattaaat tagcagatcc taatgaacat gctgtttcac
     8761 ctaaagcaat cgaagcccca ccatgtaaat atccaaatgg ttgttttact ttatcagtaa
     8821 caggcataga aataacaact aaaccatctt cctggtgatc tattgacatc tcaaatgtct
     8881 ctaataaatg agtcatattt tcacctcttt atgcttatag taccatagca gcaatagtac
     8941 cgaaaatcat taaaggaata ttataaaaca agaagtttgg tacacatgta tcacgtatat
     9001 gatcatgttg gccatcaaca tttaatcccg cagttggtcc taatgttgaa tcacttgcag
     9061 gcgaacctga gtcacctaat gcactcgctg ttccaatcaa tgcgattaat gccattgtat
     9121 ctagtccaat tgacgctcca aaaggaatga ataatgatgc gataatagga attgttgcaa
     9181 atgatgatcc aatacctaaa gtgacaatta aacctatcac atacatcatg ataatgctaa
     9241 ataatttatt atcaccagta atacttgtta aagttttaac taattcatct atatcaccag
     9301 tagcattcat tacaccagca aatccatttg ctgttaaaat aactacacca atataagcca
     9361 taattttaat accttcaaca aacttagcat ctaattcata ccaattatat gcacgtgaaa
     9421 taaagaatac gagtacccct gccagtgcac caaaaatcat tgaatctgta aatgtttgta
     9481 ctaaaaatgt agctagtatt gctacaattg ttactattaa gatatatggt tttaactctg
     9541 taacattgtc actatctgaa attttacgtg tttcatattc acgtggttta cgatatacat
     9601 ataaaccgat aagtaagcca acaatatacc ccattgaagg aataagcatt gctttccaaa
     9661 tcatattaaa ctcaattggg tgatttgcct ttgcaaagcc actttgaata atttgctgga
     9721 aaatttgacc gaatccatat ggtaataaca catacgggaa acataaacca aaaccgataa
     9781 tcaaaccgat taaacgtcta tctattttta agtcattaaa cagacttaac aatggtggga
     9841 tgacaattgg aatgaatgca atatgtacag gaattaagtt ttgactcatg atactcatag
     9901 ctaataatgc aatgattatt gtcactttga ctttaactct tgaccatcga ctattttcag
     9961 cgtgaattgc atttataatt tttcctacta aatagtctgt gataccactg tatgaaatta
    10021 atgctgcaaa tccacctaat aaagcatagc ttaatgctac ctcagcacca tcgactatat
    10081 ttttcccaaa tacatttata actttttcaa tgctcatgcc tgaaattaag ccaccaacta
    10141 gcgcactgat aaataagctt ataactacgt ttaatcgaca taaacatagc acaatcatta
    10201 aaattactgc tattactact gcatttatca tatgacaacc atcctttatc actctatcga
    10261 actaaagcgt ttatagacta catagtatca gtagctttaa cacctgtcaa tagcaaacta
    10321 taccaataat ctttattttt tagttaattg tctttcttaa aataatttta gctttcatta
    10381 aattaaacaa ttttacaagc ttggaacacc aatcaaaatc ctaagttcta aaatgcaata
    10441 ttagtagtcg ttgactgaat gaacatatgc ttataatatt tttttgcaat gctagtcaag
    10501 ttgatttatg ctcacaagga tatgcgattt atattttctt acaacaatga aaatgcctga
    10561 tacaatgcga tcctttatac tttcaagagt taaattagaa atgtatatca agacacaagt
    10621 tgtatcaggc aaataattaa attattgttg ttttaaccat tgtactatcg tcggaatcat
    10681 aaatcctgtt ggcccttttg gaccattata tgaagcttta ttagtcgttg ctggacctgc
    10741 aatatcgaaa tgaatgtgag gtgtttgacc actaaaatgt gttacaaaac ttgccgcaaa
    10801 tagcgcttta ccttgtccat tcgtatggtt aactaaatca gcgatatcac tgtgtttaat
    10861 acttgcacgt tcggttgcag taatcggtaa ttcaaatacc atttcatcga cttcagaact
    10921 tatttgtaat atatcgttta atatcacttt actattcgat tcaaatgcag cagctttatc
    10981 atcgcctagt gcaacaattg ctgcacccgt taatgtagca aagtccataa tcacactagg
    11041 ctgatattga tttgcataaa acacagcatc tgcaaggact aatctacctt cagcgtctgt
    11101 attcattact tctacagttt caccacttaa tgctgtaaat acatcatctg gcttcattga
    11161 tgcttcattt atcatatttt cagcacacgc aagcactccg acaatattta caggcagttg
    11221 taaacgacta gccgcttcaa tgataccaac gacattcgca gcgccacaca tgtcaaactt
    11281 cattgtagcc atgccattct tcgttttaat actataacca ccagaatcat acgttatacc
    11341 tttaccaact aaggcaattg gtgcttcatc tttgtctttg ccattatatg tgatggttac
    11401 taatctcggt ttatgcttac tacctttacc tactgcttgt aaaagtccga atccttcaga
    11461 aactaaagtg tcataatctt taacatctac tttgaccttt gtatttttaa aatgattaac
    11521 aatatcttct gcaaatgttt gtggtgttaa tacattcggt ggcatattac taaagtctct
    11581 tgccaaatta atggattggc caatactgat accctcatga ataaaatcta attcaattaa
    11641 tgattcacta ataaggttta aattcgtctt aaacggtgcc ttcttacttg atttataatg
    11701 atcgaattca tatgttgcac gctcactttg aataccgcat gccattaata catctgataa
    11761 ctgatcatat tttgaaataa atgaatccat aagtaaatac gtatcttcaa tgtgttctga
    11821 ctttatgtat tggaaaagat gtccccatat tttcaacata tcttgataac tacgtgtctt
    11881 taagtttcct aaaccaactg taattaaacg atatgtttga tcttgtacat caaatgcagt
    11941 tgtataaatc ttcccaactt tactaccaat aatatgttga tgttttagtc tttcaagtga
    12001 ttctgtaata tcgatatgat taaaactaat gcgctctaac tgatttaaat gttctggtat
    12061 accaataatc aatgtattta tttcgttgct tagtgtgtta tttaatttaa aattcataat
    12121 gtacctcctt agatttgata tgttactcac ttcaaattgt acaacaataa agcccttcag
    12181 tgacactgaa ggactttata aatgaataat ttaattttat gtgtttagct gaaactttat
    12241 ttaaagccta gaatttacct tttttgaatg ctaaaccgat accaccgatt ttgaataccg
    12301 cacgtgtatc aatcactttt ttcatgaatg ctgctttttt accagcgata ggtttaccaa
    12361 ataccatacc tacaccgtca tgtgaaccta aagaacaaac agttccacga tcaacgtatt
    12421 cgaattcttc agttgattca ccgtttaaga tgcgtttaat gtttttagca acactttcac
    12481 cttgttgcat tgcaatttgt gctgtagttg gtaatggacg ttcttctcca gctgggataa
    12541 acgctgaaca gtcaccaata acaaaaatgt tgtcgtaacc attgattgtt aaatcttgct
    12601 ttgtaacgat acgtccacgt ttaacgcctt caaatgattc ttccattaat ttactaccac
    12661 gtacaccagc tgcccatact gaagtacctg catttaattg ttgtttttca ccatctactt
    12721 caactacaaa acctttttcg ttacaagcaa cgattggtgt agcaatttta aattcaacac
    12781 cgcggtcttc taagtagcta actgcatggt taactaattc ttctgagaac attggtaaca
    12841 ttttaggtgc tgcttcaaca caagtgattt taactttatt ttgatccaca ccatatttgc
    12901 tacataattc aggaattctg tctgttaatt cacctaagaa ttcaacacca gtgaatccag
    12961 caccaccaac taagatagat aaatcgttat catctttttc ttttgatgct gcatagttag
    13021 caaatttgtc ttcgatatga cgtgataatt cacgtgctgt gataacattt tcaatttgga
    13081 aagcatgatc tttcatacct tcgatgccga atgtttcact aacgaaacct aatgctacta
    13141 ctaaaatatc aaagtcataa ataccttgat ttgtttctac ctttttagca tcacggtcaa
    13201 tttttgttac ttctgcttga acaaagttca ctttgtcttt cttcaagaca ctttccacag
    13261 gatataatac atcttcatag tttagtgtac ctgctgatgc ttcatgtaac catgttgctt
    13321 catagtgata ttcattttta ttaataagcg taatttctgc ttcttctgtt gatatcgctt
    13381 tttgcaattt agttacagtt tgtaaacctg cataaccagc accaagtaca agtacttttt
    13441 tacgatcttg agccatttaa tttcacctaa gctttcatat ttttttaacc aaatgctgat
    13501 aattactagt aacaactggt cattactact tttaccacaa tgtatactag tttatcatca
    13561 ttttgttatt taagtctttt aaattatgta aaaacctgtg atgttcacaa aaaagacatt
    13621 tttaatccaa tactaattct atagctttta tgttatattt tcaagcaaga ttcagtcaga
    13681 ttgtgaaaaa attaattaat tttttcgtag cctgatttcg attaaaaatg tatccgctat
    13741 cacgatcatt taaaatacta tttatagtca gattcttaat tttcaataag ctttttaata
    13801 aaacaaaata tctttacgca aaaataggac ataatcaaat atgtccttaa tcgttattga
    13861 tatcaatttg tatcccaaaa attgggttaa ccattaaaaa gttattttat tagcaatttt
    13921 caggattacc tgcaactttt gcagttctaa atgaactacc acagccacat gaagcaattg
    13981 cattaggatt gtcgatttgg aaaccgccac ccattaatga ttgcttaaaa tcaatagtcg
    14041 taccatttaa tacgggtgca tcttttttgt ctactaatac ttttaatcca aagtattcta
    14101 agacttcatc attttcacca ggcgcttctt ctgcacccat accgtatgtt aaaccagtgc
    14161 acccgccacc attcacttta atttttaaat agccatctgg catttcattt gctttaagca
    14221 tatcttttac ttcgtaagca gctgcttctg ttaatataac tgttggcatg ataactcctc
    14281 cttaaaaaat ccaagtttct tttatatgtg catatatatt ttgtaataat tcttccggcg
    14341 aatcaccttc aacaatatca ccatttacta aagcatacaa cccggctgaa catataccac
    14401 aatgtgtcag gcaaccatac tctaacacat cgacatctgg gtcattttcc agttgattaa
    14461 aaacataatc tccacctttt gccatgttag agagacaaaa ttctacgatc ggattcatac
    14521 ttcaccttct tatttcattt gttacaatat tatagcattt taaaactggt attttaacat
    14581 gatgtgctca attagcaaca actgatgttt cttatcccag ttatgtaata gtgccttagt
    14641 tagtacaaat atttatttgt agtcattttc aaaaaaatat ataataagca tataaataca
    14701 tatttacttt tttaggggtt attgatgaat caaagacact tgcattttat aactgttcat
    14761 taacaaatat atctatgcac tttgatcttt tcaaaattaa agtaaatatt aacatataaa
    14821 aggggtactt cattatgaaa aacttagttt tgttaggcgg cggatatggt aatatgcgta
    14881 tcatgtcacg cattttaact acttctttac cacaagatta tacagtcaca ttagttgatc
    14941 gtatgccatt tcatggattg aaaccagaat tttatgcttt agctgcgggc acgaaatcag
    15001 ataaagatgt tcgtatgaaa ttccctaatc atccacaagt gaatacagtt tatggtgaaa
    15061 ttaacgacat agatttagat gctcaaattg tctcagtcgg taattctaaa attgattatg
    15121 atgagctaat cattggttta ggatgtgaag ataaatatca taacgttcca ggagccgaag
    15181 aatatacaca tagtattcaa acactctcaa aggctcggga tactttccat agtattagtg
    15241 aactaccaga aggtgctaaa gtcggtatcg ttggtgctgg attaagcggc atagaacttg
    15301 ccagcgaatt aagagaaagt agatcagact tggaaatata tctttatgac cgtgggccgc
    15361 gaattttaag aaattttcca gaaaaattaa gtaagtatgt tgcgaaatgg ttcgccaaaa
    15421 ataatgttac cgttgttcca aattcaaata ttaataaagt tgaacctggt aaaatatata
    15481 actgtgatga acctaaagat attgatttag ttgtatggac agcaggaatt caacctgttg
    15541 aagttgttcg taacttgccg attgatataa atagtaatgg acgcgtgata gttaaccagt
    15601 atcatcaagt accaacatat cgtaacgtct atgtagttgg tgattgtgct gatttaccac
    15661 atgcgccaag tgctcagtta gccgaagttc aaggtgatca aattgccgat gtgcttaaaa
    15721 agcaatggct aaatgaacca ttacctgaca aaatgccgga actaaaggta caaggtatcg
    15781 ttgggtcatt aggagataag caaggttttg catatatcat ggaccgcact gtaacaggac
    15841 gactcgcttc tattttaaaa tccggcgtac tttggttata taaatatcat aatggttaaa
    15901 attaaaaagc aatgtcagtt cacactatta ctgacattgc ttttagttat gtgtatatta
    15961 ttcattcaca agcttttggt ctataaatcg agtgatttgc tttgtttgta tataaccatc
    16021 tgctacatat tcatcgttca ttgtaattaa tggataaaat agttcatctt gttctattct
    16081 ttcaataaat tgtaaatcat gatctgttaa gttgtcatta tcttttgtaa tatctatata
    16141 cgtatattta aatgatatat ttgggtattt tctttttaat agcggctgta gccagtcata
    16201 aatatctttc gatgttggcg cattaacgca acttgcacat ataacatctg ccccatatac
    16261 taccacactc acgtgctcca tatatttatc ccccattggt ttgatagatt tttattacac
    16321 tatctattat aatatactaa taaagattat caaattcatc tctcgaaagg agacttgcct
    16381 gatgcctact gaagatacaa cgatgtttga tcaagtagca gaagttattg aacgtcttcg
    16441 tccattttta ttacgtgatg gtggcgactg ctcattgatt gacgtggaag acggtattgt
    16501 taaattacaa ttacatggtg catgtggtac atgcccaagt tctacaatca ctcttaaagc
    16561 tggtattgag cgtgcattac acgaagaagt gcctggtgta atagaagtag aacaagtatt
    16621 ctaatataaa gatattaagt taacagaaca tattatgaat aacaacaaag acaggaatac
    16681 tgaattattt ataatcagtt attacctgtc ttttttcgct gtcaaattgg actgatggga
    16741 aagttatttt atactattta tctgattaat tattttatta ttgccacata tccaagcaca
    16801 tattactatt ctattctatg aaatttaaaa tataaaaata gcacatacgc tcaatcaaaa
    16861 tcgttgagtt atgtgctatt tgtattttaa tttttaggtt tatctacttc aggttgtggt
    16921 tcacctttca tatgtttcgc aatttgctca tccatataaa cccaaccttt ccaaccgatg
    16981 tgtacggcat cactgataac atatttttca taatctttat cagtcatatc gtaaatttta
    17041 ccaccattat ctacaacagt agaatggatt tttttataaa ctgcttgacg acgttcttta
    17101 tcgataccaa tgtggtcata ccatacaccg tttgatggaa tacttacata ttgaacatct
    17161 gcaccagcag cacgcattgt ttttacaagt aattctaaat cttggaattc tggagaatta
    17221 acattgaatt cgtagtcacg tctaacttta cgcttacttt cttgaattaa tttccagtat
    17281 tgatctctaa taccaaattt attcgatgta gtatcagctt taccaatttc aactgctttt
    17341 tgtttcatct catcccaaga agcgtctggt tttgtagcag gtttaacatg ttctaatgga
    17401 gatttatcca ttgcaaacaa tgatttaatc gcttctattt taatcaattg attctcttta
    17461 aaaccagaaa tataactatc tttagtttct ttagggtttt tagcataaga tttcaagtat
    17521 tctttattgt gtacatgtgg aaactgtaat aaacgttgtg cataacgacg ttttaattca
    17581 gtagacatgt ttttctgctg gaacatttga ttaatttgag tttgagacat acgagcatca
    17641 aagttttgat tcgttaaacc atggtttgta aaccattgtg gtgaaataat aaatgttaat
    17701 ttcttacctt ttaatttatc atactgtgat gcaagttcaa ctgcgttaat taagtctgta
    17761 gaaccaccag cacctaataa gaatgctttt ttgttggcgt tatgcttatt taatgcaatt
    17821 gcaggattaa atgggtcatc tttacctaat tcactagagc cgtatatagg ataatacttg
    17881 tttgattcgt ataacttatc ttgaatgagt gtgcctttta gtacttgatc tgtcaatgaa
    17941 gttctattat cttctacagt cttttcattt actaatcctg taaaccaact agcaggtaat
    18001 aatagaaaga caatgaatac cgctccacta attaaaatgg gtaaaaaagg ttttaatttc
    18061 atcgtaactc ttctaatgct tcaacgattt tatttggtgt tgcccactca tctctatcaa
    18121 agtccataat agatacttcg atatcaagtt tattttgaat ctctaataat aatccaactg
    18181 tttggaaaga atcaataata ccttcttcaa aaatttctac gtctggattt tcttttacaa
    18241 tatcattttc tgctacttct gctaataaat ttaatacttg ttctctaaat tccataatta
    18301 aattctcctt tattatataa gtttacctga gaagattaaa aagccaaatg ttacaaagtg
    18361 gaatgtaatc acaatgctaa gtgctgttgt gaaaccattt tgccaacgtg gcggatgttt
    18421 cttacgccaa cgttcataat agccataacc tataaacaat gctgcatggt ataaaccata
    18481 aacaatgtaa tacacttcga taccatgcca aattcccatt atgaagaagt tgattaagaa
    18541 tgccacgtta gacattgcaa attgactctt caataatttt ttacgagaca tgtagaataa
    18601 agatctcatg taaatacaat ctctgaacca gaatgataat gtcatatgcc atctattcca
    18661 gaaatcttta atatttttcg ctttgaaagg tttatcgaag tttggtggtg ttttaatacc
    18721 gaataaataa ctaaatgcta tcgcaaataa actataacct gcaaagtcaa agaataaata
    18781 taagctgtat gcgtacatat ataaccacaa attgacaaag ccatgtaagt ctaattgtaa
    18841 cggcatgatt gcatatgtgt taataaagta agcaacaata tatttataca agaaaccaag
    18901 cataatcatg tgaattgctt ttaatactaa ttcacgatat tcattgcctg ttggtacttt
    18961 tttatcgtct ttaacgaaac gtttgtaacg atcgattggt ccagatgaaa tcgttgggaa
    19021 gaatgaaata aattgaatta atttccatac tttaatttct ttgatagaac catcacgaat
    19081 ttccataatt aactgcacac ttttgaatgt aacataagaa attcctaaga aaccaacaaa
    19141 ttcaattaat ttactttcat ggaagtgaat ctgatgtcca cctaaccatg tactttgtaa
    19201 cactttcaca agtgctaatg gcaatattga taaaaccatt acagttacaa attttgaaaa
    19261 tgaattattt tttggttttg aatgataata aaacattatc aataaaactt gccatacgac
    19321 gtaaataata aaactaatta attgaacact taaatacttt tggtcaaaca gattatgttt
    19381 atcagaagaa aagattaaca caatcataaa tgctgtaact acgccattat aaatgtaact
    19441 tcgcttacct aaaaatccaa gtataatgac tggtaataat gcaattaaag caattaagaa
    19501 gaatgtaaaa tcaccatatg gaatcatccg ttaattacct ctgcaatttt ctttctgtca
    19561 attttaccat ttgaagtcaa tggcaattgt tccatccatt caaactttct aggaatcata
    19621 tactctggta agcgtgattt caagtcattt ttaatatttt tagtcatttc tgcattgtcc
    19681 gtaacttcag tcgttggcac aattgcacca attaaatgaa taactttatc atttttatat
    19741 acaggtacaa caatcgcttc ttttacgaac tcagactggc gtaattgtgt ttcaatttct
    19801 tctaattcca ttctgtagcc attcaatttg atttggaaat caatacgacc ttgaatgaac
    19861 cattgaccat tttcaaactt cgctttatca ccagtgtgat atgtacgaat accgtcatcg
    19921 aaattaaata cttcagctgt tttttggtca ttttttaagt atcctaaact tacactttga
    19981 ccttcgataa caagttcacc ttcatctgta gtagataatc ttgcgcctgg tctttcaacg
    20041 ccaacaggta atgtcggata ttgatctaag atttcttgtg taatttgaat acttgtaact
    20101 gctaccgtag cttcagttgg accatatgtg ttgtaaatcg tcgcacttgg gaaacggttt
    20161 actaacgctt ttgctgctct gtgaggtaga atttcaccac agaagaagaa ttcgttaaga
    20221 ctaccatatt gttcttcatt aagcgttggt aataataaac acatttccat aaatgatggt
    20281 gttgataccc aaatgttaat cggtgttgct gttagcattt catttaataa tttaggttta
    20341 ttaatcatgt ttttatctac aagatttaat gtaccgcctg atgctaaaca tggataaata
    20401 gccattacag ataaatcaaa tgaaaatggc gcttggttaa gccattgttg ttcatttcct
    20461 gatttattaa gttctaacat ccactcagta aattgaacta aacttgcata ttcaatttga
    20521 acacctttag gttccccagt agaaccagat gtaaagattg tgtatactgt gtcgttatct
    20581 ttaatctgac tatcaaaaat tactgggtct tgagatgttt taatatcttc tattgtaaat
    20641 acttcgcctt ctaaactttc aaatgattca tcagtcgtat taaatacaaa ctctggttga
    20701 accttgttaa taatcatttt aatacggtct tcaggaattg aagtgtctac aggtacatat
    20761 ccacatcctg ctttaatggc accaatcatc ccaacaatca tatatggtga catgtgaccg
    20821 aataaaatca tcggtttctt actaccttgt aatcgatgtg ctaatttact agactcatcc
    20881 attaactgtt gataagttaa ttcatcagtt gtgtgtctaa cagcaatgct ttgtggattt
    20941 gcatccgcaa acgcttgcag cttgttaata atatctgtca tattaagtct ccctcattag
    21001 aactcattat aaatgaagtt attgtgtgtg tcgccactgc cataaattaa atataaagta
    21061 atgaatattg ccaaatacaa tagtgttaat aaatatggtt tgaatgcttc aacatattta
    21121 ttaggtggct gtttactttt agatttcata ttgcacctct taaagttctt agtaaaaacg
    21181 cctttataaa gaccgttcaa tataaaatac gttttaaaat ttgtttttta caattcatta
    21241 tatcgatatt cataatgaaa ttcaatttta attttataga ttcaacatag taattggttg
    21301 tcatcactca attattgtaa atgatacact ttgttgagaa catcattcat tttaaaggtt
    21361 atttaaacaa taaacaatta cagtctatat aacaattttg ttatatacgt caaaatcaaa
    21421 taaactcatc acattaatat gacgagttta taatgttatt gaattatcat cagcgcaaat
    21481 atatacattc gcaagtcaag cataacatat ttaacaattg ctttgcttgt tttaccaatg
    21541 attaaaaacc atacttattt tcaatttact ggagtatgtg gtacctgatt tgtcataacc
    21601 gcttctatat tattaataca taattgaatc atattgtccc gtgttgttac tgatgcgcta
    21661 ccaatgtgtg gtgtaatcag aacattatca cgtcccatta atggatgtgt atgatcaatc
    21721 ggttcatttg ctaatacatc taaaccacat gctaaaattt ctttattgtc tagtgcatcg
    21781 attaatgctg tttcatctac aatttgtcct ctaccgatat taataaaaat tgcatcattt
    21841 ttcatttgtt caaatgcttc agcattaaat ttatgatgtg tttcttttgt aagtggcgct
    21901 gtacagatga taaaatcact ttctgctaac aacgtttcaa aagaaacata tgttgcatta
    21961 aagtccgcct ctgcatcttt atgtcttgat cgattatgat aaagaatatt agtattaaac
    22021 ccttgcaacc ttcttgcaaa agctttacca atatctccca taccatatat tccaatagtt
    22081 gaattgaaga catctttacc tgacaataaa taaggacccc agctttgcca tgcatctgct
    22141 tctacatatt tttcagcttc tacaatacgg cgtgctatag caagcattaa tgtaaatcct
    22201 aattctgcag ttgtttcagt aagtacattt ggtgtattcg tgacaaccac gttattcgct
    22261 gttgcacttt caacatcgat gttgtcatat cctacagcca tattcgcaat tacttttaaa
    22321 tttggtgatt gcgctaaaat ttctgcatcg atctgttcac ttaatgtaat aaaacaagca
    22381 tctgcgtcac gaagtgctgt cacaaattga tctttaggca taggcactaa tgatttttgc
    22441 cacataacaa cgtcaccaag tttacttaat tgttgataaa atttatctgg aattttcctc
    22501 gaaacaacta tttttaccaa atcaattcac ctactttata aaatgactat atctattttt
    22561 ctaattcagc tattgcttca tttaaatctt taaaagaata cgttggtggc acatttttat
    22621 tttgcacatc ttctaacgta gatacacctg tttgtacatg aatcgtatcc atacctacgt
    22681 taataccaga cataatatcg gtatcgtaca aatcgcctac catagcaact tcggatttat
    22741 ctaatcctaa aatttctaat gctttaacca taataatcgg ttctggttta ccaataaatt
    22801 gtggcgatac acctgtcgat acacttacaa cacttgtaat agcaccatta ccaggtaata
    22861 aaccacgctc tttaggaatt gatacatcag gatttgtaga aataaatgtt gcaccatttc
    22921 ttacacctaa cgttgcaatc gcaagctttt catatgtaac ttgttcgtca agtccaataa
    22981 ctacataatc aacatgctcg tcatttttaa tgacaagtcc cgcttcggtt aacgcagtat
    23041 ttaaaccact cccacctaac atatatactg atgctcctgg tgattgttct gaaatataat
    23101 cagcagtggc taacgctgac gttacaacct cttctggttt agcatcaatg tgcatttcac
    23161 gtaatttttc agttacttgc tcaggtgttt ttgttgaatt attagttacg tataaatgag
    23221 gaatgccttt tacatttaaa taatcgatga attgttttgc tccatcaatc tcatctgttc
    23281 ccatatacat tgtgccatct aaatcgatta aatacgcttt atactgtttc attattgatt
    23341 ttctccttta ccaaaagctg ttactggtac attttcttga tgtaaaaatg tcgttacttc
    23401 tgtaataaat tgtttgtaat aaggtaatgc gtcatcaaac attggcatga taatcttaat
    23461 atctaaggct gtgtaatcat atgtaaattg tttacgaata ccgacagttt tattaatcgc
    23521 ctgctgtgtt tctttagtaa taacattttc tagttctaat atatcaatca catctttata
    23581 attaccagga tcccttaaaa taaatgcatc gataatcata ttccctatat ctaccgatga
    23641 ttctatcaac atttgagcaa tgcgttcaaa tgcataatga ttgtgcttgc tctcatgata
    23701 atcatcagtt aatgcttgta aataggctaa tttctgagtt agtttatctt tgtctacaaa
    23761 atacattcct tgtcacctct cacttatata ttatcataat tttgcagtat acttcatttg
    23821 tcgttatact aactttacta cttttaaaag gagtcgctac aaaatgattg atatgtattt
    23881 atatgatgac aacgaagaga gtcaagttca gtttgttggt tttgttggcg agcatagtcg
    23941 atatgatttg atgttagtcc atacaaatag acattatggt aagacactcg tacttaatat
    24001 gcaaacaaat aaattcggta ttatcggtac tgatgattta aaagaagaag gctatatcgc
    24061 tcatatttta ggtgtaaatg ctgaagaagg cgatgaaatt actgagtatt taaatgaagt
    24121 cattcattaa agataaaaac ccctaactag attacaggtc catgcttgaa ttgcatgatt
    24181 cccattttca atctagctaa gggttttatt aatgttcagt atcttgaatg gttggcttaa
    24241 tcttcacatc ttgaagttta ttgtcgtcat ctatcacatc agacggatga acttcttcga
    24301 ttaacttttt aacctcttgt ttagacaaat gtcttaatac aaagtaagga caaccaaagt
    24361 tacaatattc aaatatgtaa tcttgaatat ttgaaaaacg tttactcatc tctgcttttt
    24421 tattagaatc tttgtaaaaa ccttttaatc gtaattgatc gtaaccatag tcaccaacta
    24481 tgtaatcata tttatctaaa atatctgaat acctagcaat aaattgttct tcattaaaac
    24541 attcgcgata attttctatt aattcaaagt aatgttgatc tacttttatc aaattcttca
    24601 cctatctatg acaatgaaag gctcagttta tacttttagt gtttcataaa aataatgatt
    24661 acttctatga cacgttcgtt ttgtacaaac taagccttta tgccttatta atggttaaat
    24721 attaactatt taactgtgcc tcaccttggc gttgcttttc tttagcagct tcatttactt
    24781 gctcatccgc atgataagaa ctacgtacta aaggtccagc ttggcaatgt ttaaaccctt
    24841 tatccattgc cacttttctt aatttaccaa actctaaagg cgtgtaatat ttttgaacct
    24901 ttaaatgttt acgtgaaggt tgtaaatatt gaccaatcgt taaaatatct acatcattcg
    24961 cacgtaaatc atccatcgtt tcataaattt cttctatagt ttcacctaat ccaaccataa
    25021 tacttgattt agttgggata tccggttgta attcttttga acgacgtaaa aactctaatg
    25081 ttctgtcgta agtcgcacgc gcacgaactc tcggtgttaa gcgacgaaca gtttcaatat
    25141 tatggtttaa aatgtcaggt cttgacgcca ttaatgtttc taacgcatca tagtccccgc
    25201 ccatatctga tggtaaaatt tcaatcgttg taaatggatt tctttctcta actttacgta
    25261 ctgtctcagc ataaacattt gaaccagcat ctcttaaatc atcacgcgca acagcagtga
    25321 taacaacgtg tttcaaattc attaattcaa ctgattcagc tacacgttca ggctcattta
    25381 aatcaagttc attaggtaaa cctgtcttaa ccgcacaaaa acgacaagct cttgtacata
    25441 cggcacctaa aatcataaat gtcgctgtac gacgtgcacc ccaacattca tgtatattag
    25501 gacatttagc ttcttcacat acagtattaa gatttttttc cctcatcatc ttcttaagtc
    25561 ctgtatagtt ttcgttggta tttaatttta ttttcaacca atccggttta cgtaatattt
    25621 cctcgttttt tgtcgccata acaacacata ccctcctgtt aagtgtatct ttaaacatta
    25681 tatcgaaatt catgacaaat gaaaatccaa taatcttact ttttaatatt ccaataattt
    25741 ttctttaaat atatctctta aaaactctgg cattaaatac tcttttggta attctttcaa
    25801 tgttgggaaa taacgaccga acgtatacat atctatcgta cctagtacat attctttgtc
    25861 gtcttcgatt tcttctccat tcagatagta acgccctgta gaatgaatgt accctaaatt
    25921 ataaagaata tatcctccaa atatattccc tctgaaaccc aaaccttgtg catgttcata
    25981 catatattct tgtttattac ttttagctat aatctctttt aatttcacac caaaaagtct
    26041 aacccttacc atattaatcg gatgcggtaa catttgatga atgtcatatt ctgtcacttc
    26101 atcttttaca atatctttaa cgagtaagcc agcattgatg atggcacatt gtgcatgtgt
    26161 atactcacaa acactttgag ctaataagta tgcagcttca gttatgtgat tcatactacg
    26221 cttaagcact actggatgtt gaattactga attggacatt aacgtttttc cttcttcttc
    26281 aaatgaagtt tcaacttcag gtaatgtttc taaaggaata atctttgcag ttttatgtac
    26341 tactttatgt gcctcaaaag ttaaattaac ctctccaaga taattaccat actttccagc
    26401 tgccgccatc agtacaccat tattgatttc accatgttca aaataatgat gcgtatgact
    26461 accaaaaatg acatcaattt caggcaattc ttggcataat gtttcatcga agaaaatgcc
    26521 acaatgactt agcacgatta atacatcaaa tttacctcgt tgaagttcaa tttcttcttt
    26581 tatagattca agtggatcgg taacaatcca atttagtgca cgataaaatg gggtaaaagg
    26641 tgctgtcgct gcaacgaata gtattttcac accgtctatg tccttaatat aagaagaaac
    26701 gatattattt ggtaaatgac ctgattcatc tataacattg ctacatgtca ctataaattt
    26761 tgcttcgtcg taaaggtgat ttaaagcttc gtgtgaaatg gtcatccctt cattattacc
    26821 gattgttgca acatcacatt ttgcttcatt tagtaatgcc acattctttt tacctaaagt
    26881 tgcttcagtt ataggtgcgg ataaatctac atgatcacct agatcaacat ataaagaagg
    26941 atgattaagt cgtggccgat gttctgccat atatgcttta atgcgttcgt attcatgtaa
    27001 atgactatga atatcgttcg tatgataaat tgtaagcctc aaattgacgt cctcctttta
    27061 aagttgtatt aaatcaacgc acgaataatt aaatatatac ccattaacaa cattactgtt
    27121 ctcaataatg ttactaccgt atctgactta attgattgat tcactttgac accgattttc
    27181 gcaccaaaat aactagaaat aattaaaatg attgcataac cccaagctac gtgaccttga
    27241 gcaatgtgcc ctatagaact catgacactt gaaaagaaaa tcatcatcat acttgttcca
    27301 acagctacat gaggtggaaa tctaaataca ataagcatta gtggcgtcat tagtgcgcca
    27361 cctccaatac caaataaacc tgtcaatata ccaattaaaa acgttgtaat aaaagcaaac
    27421 aatggtggaa cactataatg atatgtttta cctttagcgt ctacataagt cttttcatac
    27481 ttgggtttat cgaaaatttt aaacggttta atcttatttc ttaccattaa taaaatggct
    27541 acgaaaatta aaaagatacc aaaatataaa ttaaatgact caaatgttaa atatctacta
    27601 atgaaggacc caagcaatga acctggtaat agtccaaata aaaagatgga accattttta
    27661 atatcaactt gttttgtttt taaatatcca agtgatgaag aaagtcctgt cacaattaga
    27721 atgactgaag acgtccctat cgctacttgt gttgtaatat tatgtagtaa tccatgttca
    27781 acaccgaggt aaaccattgt tggaacgata ataataccgc ctccaatgcc tacgatagac
    27841 cctataatcg ctgacaaacc tccgattaaa actaataatg taattgttaa taacatagtc
    27901 gtcgcctctt aaaataattt taattgttgt ggtgctaacc cttcatattc tatattcaat
    27961 aatcgctgat atgttttggc attatttgct gcatgaccac cagaattatt gttaaatatg
    28021 acgtaaactt tcttagcttt ttgtgctaat atttgtgcct tttgtgccaa gtctattaat
    28081 tcttgctcat tataatcata taaatagcgt acatcgcgcc attcttgatc tgacatatct
    28141 ttcttagtcc aaccgtaatg attacgtcca tgataacgta caaacgcaat ttcatttgtg
    28201 attcgattga ctaaaggtac actgccatct ttcacttgtg gttcatcaac tactgcatga
    28261 atgatttgat gttctgttaa aaatgccaat gtttgttctt taaatgcatc actaaaccat
    28321 gattgatgcc taaattctac acacattgga aatgcttgta attgctgtct tacatacaaa
    28381 atatatttga tattttgtgc attgcagtca aaccatggcg gaaattgaac caataccatt
    28441 gctaattttt tctgtgtatg taagggctct aacatattct taaattgatc aaatagttct
    28501 tgccttgtat ctgcaaatgt tttgtagtct gcatgcaatg tgagtgcttg atgaattttg
    28561 accacaaatt caaatgtatc aggcgtttct tttatccatt tcaatatatt tctttccggt
    28621 tgtatcgcat agtatgtcgc atctaattcg acaaccggaa aatgtccagc atatgtttta
    28681 agtttatcgg tttggcgttc taaatcttca tataatgaat agtgatcacc ccaacctgtt
    28741 aatccgatgt ttatcatata tatcaccaat gtcatcatac catataactt ttatcataat
    28801 catttcagcg aactttagtt tgatgttttt gcttgattaa aatctttcgg cgatcttcag
    28861 cttgatgttt tcgtttgatt aaattggtaa aatagaaacg caatccacaa aaatggcaag
    28921 cactaaaata atgtttgggg gtgcttgtgc ttttgtggat tgcggtcgat tatttatatt
    28981 gcatgatttg attaatttga ttgattatat tggacatgat ggtgttggcg ggatgcgttg
    29041 ttgctagtcg cgggctttgt ccactccaca tatgtattaa ctctttgtcg ccgatgtttg
    29101 ctgcggcttt tcttatgcta cttgttagct cattttgtat tggataatct gggatatcgc
    29161 cttcgtattg ggacatttct tcgataaacc tattgttgat accgcgtgca agctttccac
    29221 taaacgcttt tgtaatgact gtatctgttt ctttactatt tataattgca tctcgcagta
    29281 gttctgatgc attactgtct tgtgatgtta aaaatgcggt gcccatttgt accccttctg
    29341 cacctaagac aatacttgcc aaaactcctc taccatccat aattccacca gcggcaatga
    29401 ccggaattga aacgacatct acaatttgtg gcactaaaga tattgttcca accataggta
    29461 attgattttt aggttttaaa aatgaaccac gatgtccacc tgcttcacta ccttgagcaa
    29521 cgatagcatc catacccgct ttttcattcg caatagcttc atcaacactt gttgctgtac
    29581 ctataagttt gacattcgct gctttcaacc tgcttataat ctgttcgctt ggaattccaa
    29641 aagtaaaaca acatacaggc acttgctttt taattatcgt atcaatatga cacttaaatt
    29701 gttgttcttc ggtaattttt acaaccggct cttctaaatg taatgcgcgt cgataaggtt
    29761 ttaaccatgc attcatattt tcaatttgac tactggtata tgattgttga cttggtacaa
    29821 agacatttac gccaaaagaa tttgacgtta attggcgtac ataatctatt tcatcttcca
    29881 attgctgcgt attaaagtaa cctgcgccta ttgtgcctaa cccaccactg ttacttactg
    29941 atgcaactaa tttcggtgtc gtacttcctg ccatacctgc ttgtataatt ggatattcaa
    30001 tacttaacat ttgagtaagt cgattcttat tccacatagc tgttcgctcc ttatatagat
    30061 acgttgcgat ttttccgttg ttgaaattga atttgctgtt gagaaagttt ttctttttcc
    30121 tttttatcca tctcatcttc aatttccata cctaataatt cttcaattaa gtcttcatgt
    30181 gacactatcg cttcagtacc accaaattcg tccaacacaa ttgctaaatg ttttctagaa
    30241 atagtcatct tacgtaatac ccattcagct ttattgtgtt cattcacaaa taatggctta
    30301 gctgaatagt ttgtaatttg attttctttt ttattactcc aagccaacag atatttagaa
    30361 tgaaacaccc caataatgtt atcaatatct ccctcgtaca ctggatatct agtgtatggc
    30421 ttattcataa ccgtttcata aacttcttcg tatgtcgcat ttgaagcaaa tgccgtcaca
    30481 ttaattctag gtgttgtatc tacatctttt acttttaaat tttcaaaatt aatgacacct
    30541 tccaacctac tcgtctcaat ttcatttaaa gcaccttcat gtccagcaat tgctaacatt
    30601 gttttaaatt cttcttttga aaattgatgt tcttgaggtt ggcccttaga taaacttcga
    30661 ttaatactgt ccgtcaactt atttaaaagt aatgtgatag gacggaacac aatgacacaa
    30721 atattaataa ttggatatac aagccttgtt attttatctg gaaatgttgc agcgacagac
    30781 ttgggaatca cttcggagat caaaatgata acaactgtta aaacagctga tgcaatacca
    30841 acgctaatcc cccaacgtaa agccataatt gtaacaagtg ttggtaataa aatattcgcg
    30901 acattattcc caattagaat cgttgtaata aactcacttg gtttttcaag taactttaca
    30961 atgccttttg cttttttatc acctttgtca gcttcagttt taaattttgt tttattggca
    31021 gccgttaatg ccgtctcgct tcctgaaaag aaaaacgaaa taaatatcaa tataattatg
    31081 gcaatgatca cgcgtgtagt ctccttattg tcatatctta tttttattgt agttacttaa
    31141 ttcccgacgt tctcgtttaa taaacca
//
LOCUS       DALPQQ010000018        31003 bp    DNA     linear   BCT 22-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus strain K18-6-464
            SAMD00233528-rid16434743.denovo.018, whole genome shotgun sequence.
ACCESSION   DALPQQ010000018 DALPQQ010000000
VERSION     DALPQQ010000018.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMD00233528
            Sequence Read Archive: DRR236061
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 31003)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 31003)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001543423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001543423.1
            Genome Coverage       :: 77x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/22/2022 17:09:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,811
            CDSs (total)                      :: 2,743
            Genes (coding)                    :: 2,689
            CDSs (with protein)               :: 2,689
            Genes (RNA)                       :: 68
            rRNAs                             :: 2, 4, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 4, 2 (16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 54
            CDSs (without protein)            :: 54
            Pseudo Genes (ambiguous residues) :: 0 of 54
            Pseudo Genes (frameshifted)       :: 27 of 54
            Pseudo Genes (incomplete)         :: 27 of 54
            Pseudo Genes (internal stop)      :: 10 of 54
            Pseudo Genes (multiple problems)  :: 10 of 54
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..31003
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMD00233528-rid16434743.denovo.018"
                     /strain="K18-6-464"
                     /db_xref="taxon:1280"
                     /geo_loc_name="Japan: Niigata"
     gene            complement(234..509)
                     /locus_tag="O7798_000724"
     CDS             complement(234..509)
                     /locus_tag="O7798_000724"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499608.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YlaN family protein"
                     /protein_id="HDC2862995.1"
                     /translation="MAKQATMKNAALKQLTKDADEILHLIKVQLDNLTLPSCPLYEEV
                     LDTQMFGLQKEVDFAVKLGLVDREDGKQIMLRLEKELSKLHEAFTLV"
     gene            650..1132
                     /locus_tag="O7798_000725"
     CDS             650..1132
                     /locus_tag="O7798_000725"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499607.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDC2862996.1"
                     /translation="MIQIKGAVKFPITLDSTTWIFDDRKVSIEDLEKGVFDGSKPIDF
                     EDNHEWNRAILEGQTNPPTLNSEIKYKKRAMLEGSFVINMTPFFKHSEPHDSATTIRL
                     SNEHDHLDIPIDLLPYLFFQFAKDGKRLYSDNGVDSFIYNQEDGYSYRINHVTHIEVI
                     "
     gene            1134..1301
                     /locus_tag="O7798_000726"
     CDS             1134..1301
                     /locus_tag="O7798_000726"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499606.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YlaI family protein"
                     /protein_id="HDC2862997.1"
                     /translation="MRQVQCIICDAKVFIDERTTESKRLKNNPIRTFMCDDCKSRLDT
                     PKQRAQHYPLD"
     gene            complement(1441..3288)
                     /gene="typA"
                     /locus_tag="O7798_000727"
     CDS             complement(1441..3288)
                     /gene="typA"
                     /locus_tag="O7798_000727"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499605.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="translational GTPase TypA"
                     /protein_id="HDC2862998.1"
                     /translation="MTNKREDVRNIAIIAHVDHGKTTLVDELLKQSGIFRENEHVDER
                     AMDSNDIERERGITILAKNTAVDYKGTRINILDTPGHADFGGEVERIMKMVDGVVLVV
                     DAYEGTMPQTRFVLKKALEQNLKPVVVVNKIDKPSARPEGVVDEVLDLFIELEANDEQ
                     LEFPVVYASAVNGTASLDPEKQDDNLQSLYETIIDYVPAPIDNSDEPLQFQVALLDYN
                     DYVGRIGIGRVFRGKMRVGDNVSLIKLDGTVKNFRVTKIFGYFGLKRLEIEEAQAGDL
                     IAVSGMEDINVGETVTPHDHQEALPVLRIDEPTLEMTFKVNNSPFAGREGDFVTARQI
                     QERLNQQLETDVSLKVSNTDSPDTWVVAGRGELHLSILIENMRREGYELQVSKPQVII
                     KEIDGVMCEPFERVQCEVPQENAGAVIESLGARKGEMVDMTTTDNGLTRLIFNVPARG
                     MIGYTTEFMSMTRGYGIINHTFEEFRPRIKAQIGGRRNGALISMDQGSASTYAILGLE
                     DRGVNFMEPGTEVYEGMIVGEHNRENDLTVNITKTKHQTNVRSATKDQTQTMNRPRIL
                     TLEEALQFINDDELVEVTPESIRLRKKILNKNVREKEAKRIKQMMQENE"
     gene            3390..3581
                     /locus_tag="O7798_000728"
     CDS             3390..3581
                     /locus_tag="O7798_000728"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_008530239.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YlaF family protein"
                     /protein_id="HDC2862999.1"
                     /translation="MKQKKSKNIFWVFSILAVVFLVLFSFAVGASNVPMMILTFILLV
                     ATFGIGFTTKKKYRENDWL"
     gene            complement(3735..4562)
                     /locus_tag="O7798_000729"
     CDS             complement(3735..4562)
                     /locus_tag="O7798_000729"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499603.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="inositol monophosphatase"
                     /protein_id="HDC2863000.1"
                     /translation="MALYGFAQGLIQEAGIRIKQLMEQNLTIETKSNPNDLVTNVDKA
                     TEDFIFDTILETYPNHQVLGEEGHGHDIDTSKGTVWIVDPIDGTLNFVHQQENFAISI
                     GIYIDGKPYAGFVYDVMADVLYHAKVGEGAYRGSQPLKPLNDSNLRQSIIGINPNWLT
                     KPILGEIFKEIVNDSRSARAYGSAALEIVSVATGNLEAYMTPRLQPWDFAGGLVILYE
                     VNGQASNLLGEPLTISGPNSILVGNRGLHQEISNDYLEPHHDALIQLHEQRFKRKSK"
     gene            4719..5333
                     /locus_tag="O7798_000730"
     CDS             4719..5333
                     /locus_tag="O7798_000730"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499602.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YktB family protein"
                     /protein_id="HDC2863001.1"
                     /translation="MTKYTFKPKDFKAFNVEGLDARMEALNEYIRPQLRELGEYFSDF
                     FTSQTGETFYPHVAKHARRSVNPPKDTWVAFATNKRGYKMLPHFQIGMFEDQLFVMFG
                     IMHEAKDKATRAKVFERKFKAIQQLPDDYRVCLDHMKPDKPFIKDLTDDDLIEAIQRA
                     INVKKGEFFIARAITPQDKRLKSDKAFIAFLEETFDQFLPFYSA"
     gene            5516..6868
                     /locus_tag="O7798_000731"
     CDS             5516..6868
                     /locus_tag="O7798_000731"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499601.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Nramp family divalent metal transporter"
                     /protein_id="HDC2863002.1"
                     /translation="MNNKRHSTNEQLSLDEINNTIKFDHRSSNKQKFLSFLGPGLLVA
                     VGYMDPGNWITSMQGGAQYGYTLLFVILISSLSAMLLQSMTVRLGIATGMDLAQMTRH
                     YLSRPIAIIFWIIAELAIIATDIAEVIGSAIALNLLFNIPLIVGALITVLDVFLLLFI
                     MKYGFRKIEAIVGTLIFTVLFIFIFEVYISSPQLNAVLNGFIPHSEIITNNGILYIAL
                     GIIGATIMPHNLYLHSSIVQSRTYSRHNNEEKAQAIKFATIDSNIQLSIAFVVNCLLL
                     VLGASLFFNSNADDLGGFYDLYHALKTEPVLGATMGAIMSTLFAVALLASGQNSTITG
                     TLAGQIVMEGFLRLHIPNWLRRLITRSLAVIPVIVCLIIFKGNAAKIEQLLVFSQVFL
                     SIALPFCLIPLQLATSNKDLMGPFYNKTWVNIISWTLIIILSILNVYLIVQTFQELQS
                     "
     gene            complement(6950..7369)
                     /locus_tag="O7798_000732"
     CDS             complement(6950..7369)
                     /locus_tag="O7798_000732"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499600.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4064 domain-containing protein"
                     /protein_id="HDC2863003.1"
                     /translation="MNRKPELIMAWIANSISIIYLLVMGLSYFSLKSGNASQREELAK
                     QLSQNGGKVSLDMLQTTMGALAIILLISTLYGIFATICIKGRRKLSIILFVIAIIVSL
                     MALNLIAIVLWVIVMIMLISKKESKETTHKDDEYIYH"
     gene            complement(7652..8671)
                     /locus_tag="O7798_000733"
     CDS             complement(7652..8671)
                     /locus_tag="O7798_000733"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499599.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4064 domain-containing protein"
                     /protein_id="HDC2863004.1"
                     /translation="MTGEQFTQIKRPVSRLTEKVLGWLCWVMLLVLTVITMFIALVSF
                     SNNTSIANLENTLNNNAFIQQLLAGNGYNTTQFVIWLQNGIWAIIVYFIVCLLISFLA
                     LISMNIRILSGFLFLISAIVTIPLVLLIVTLIIPILFFIIAMMLFIRKDKVEMVAPQY
                     YEEYNGPIYDYREPVYERLQPKDDYYDVPKYEKELDKSNTVYDQEQERDKYDQFPKRA
                     VESEYNHDERTEEEPSVLSRQAKYKQKSTEELGIEDDGYYAEPEVDPKELKAQQKREK
                     AEIKAKKKEKRKAYNQRMKERRKNQPSAVSQRRMNFEERRQIYNNDISEERNSSEVKD
                     KKEQE"
     gene            complement(8745..9818)
                     /locus_tag="O7798_000734"
     CDS             complement(8745..9818)
                     /locus_tag="O7798_000734"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499598.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="spermidine/putrescine ABC transporter
                     substrate-binding protein"
                     /protein_id="HDC2863005.1"
                     /translation="MKRFLQLIIGALVVGMLCLTLSHWFKSKEQVHTNQKIYVYNWGE
                     YIDPELIKKFEKETGIQVVYETFDSNEAMEAKIRNGGTHYDVAFPSEYTVQKLKRDHL
                     LLPIDHNKVPNIKNLDSDYMNMSFDRGNKYSLPYFFGTVGILYNKEKYPNESFDSWKS
                     LYNPKFKNQILLVDGAREIIGMSLNKLGYNLNDRNSHHLKEAERDLTKLAPQVRGVVG
                     DEITMMLQQNEGNIAVVWSGVAAPLVQEGDKYNYVIPKEGSNLWFDNMVIPKTAQNKE
                     GAYKFMNFLLDAKNNKQNTEFVGYATPNKAARQLLPKEIKDDHRFYPTKKEQERLEVY
                     KDLGPEVLSEYNENFLNFKMSLK"
     gene            complement(9818..10627)
                     /locus_tag="O7798_000735"
     CDS             complement(9818..10627)
                     /locus_tag="O7798_000735"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499597.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HDC2863006.1"
                     /translation="MKWYGKLYIGILLAILYIPIFFLMFYSFNSAGNMIHFEHFTLEH
                     YQSLFQNDHLMSVIFNTIAVALLAASISTVIGTFGAIAIYYLRNKKFKVTLLTLNNVL
                     MVSSDVVIGASFLIMFTTIGHFTGLGLGFWTVLISHIAFCIPIVVIIVLPQLYEMNNN
                     MLNAARDLGATEPQLLSNIIIPNILPSIIGGFFMALTYSLDDFTVSFFVTGNGFSVLS
                     VEVYAMARKGISMEINAISTLLFAVIVLGILGYYLIQYVINKKKLIKRGVK"
     gene            complement(10633..11430)
                     /locus_tag="O7798_000736"
     CDS             complement(10633..11430)
                     /locus_tag="O7798_000736"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499596.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HDC2863007.1"
                     /translation="MRNTNKFLLIPYLLWMVIFIIVPVVLLIYFSFLDINGHFSFTNY
                     QQIFTTKYLKMFAYSILYAASITIITLTISYPAAYYITRSKFQNILLMIMIIPTWINL
                     LLKTYAFIGLLSHDGVINQFFHLFNLPSFNLLFTTGAFLVVASYIYIPFMILPIFNSM
                     KAIPNNLLQASSDLGASPFYTFRKVIMPLTKEGVMTGIQVTFIPSLSLFMITRLIAGN
                     KVINIGTAIEEQFLTIQNYGMGSTIAIFLIVFMAFILIITKSSNGRG"
     gene            complement(11423..12517)
                     /locus_tag="O7798_000737"
     CDS             complement(11423..12517)
                     /locus_tag="O7798_000737"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499595.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HDC2863008.1"
                     /translation="MEPLLSLKSVSKSYDDLNILDDIDIDIESGYFYTLLGPSGCGKT
                     TILKLIAGFEYPDSGEVIYQNKPIGNLPPNKRKVNTVFQDYALFPHLNVYDNIAFGLK
                     LKKLSKTEIDQKVTEALKLVKLSGYEKRNINEMSGGQKQRVAIARAIVNEPEILLLDE
                     SLSALDLKLRTEMQYELRELQSRLGITFIFVTHDQEEALALSDFLFVLKDGKIQQFGT
                     PTDIYDEPVNRFVADFIGESNIVEGRMVRDYVVNIYGQDFECVDMGIPENKKVEVVIR
                     PEDISLIKAEEGLFKATVDSMLFRGVHYEICCIDNKGYEWVIQTTKKAEVGSEVGLYF
                     DPEAIHIMVPGETEEEFDKRIESYEEVDNA"
     gene            complement(12530..13069)
                     /locus_tag="O7798_000738"
     CDS             complement(12530..13069)
                     /locus_tag="O7798_000738"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499594.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HDC2863009.1"
                     /translation="MNIGNKIKNLRRIKNLTQEELAERTDLSKGYISQIESEHASPSM
                     ETFLNIIEVLGTTPSEFFKDSENEKVLYKKEEQVIYDEYDEGYILNWLVSKSNEYDME
                     PLILTLKPGASYKNFNPSESDTFIYCMSGQITLNLGKEIYQAQEEDVLYFKARDNHRL
                     SNESNNETRILIVATASYL"
     gene            complement(13213..13488)
                     /locus_tag="O7798_000739"
     CDS             complement(13213..13488)
                     /locus_tag="O7798_000739"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499593.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UPF0223 family protein"
                     /protein_id="HDC2863010.1"
                     /translation="MEYEYPIDLDWSNEEMISVINFFNHVEKYYESGVTAGDFMGAYK
                     RFKEIVPAKAEEKQIFNTFEKSSGYNSYKAVQDVKTHSEEQRVTAKK"
     gene            complement(13656..15062)
                     /gene="lpdA"
                     /locus_tag="O7798_000740"
     CDS             complement(13656..15062)
                     /gene="lpdA"
                     /locus_tag="O7798_000740"
                     /EC_number="1.8.1.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009383646.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydrolipoyl dehydrogenase"
                     /protein_id="HDC2863011.1"
                     /translation="MVVGDFPIETDTIVIGAGPGGYVAAIRAAQLGQKVTIVEKGNLG
                     GVCLNVGCIPSKALLHASHRFVEAQHSENLGVIAESVSLNFQKVQEFKSSVVNKLTGG
                     VEGLLKGNKVNIVKGEAYFVDNNSLRVMDEKSAQTYNFKNAIIATGSRPIEIPNFKFG
                     KRVIDSTGALNLQEVPGKLVVVGGGYIGSELGTAFANFGSEVTILEGAKDILGGFEKQ
                     MTQPVKKGMKEKGVEIVTEAMAKSAEETDNGVKVTYEAKGEEKTIEADYVLVTVGRRP
                     NTDELGLEELGVKFADRGLLEVDKQSRTSISNIYAIGDIVPGLPLAHKASYEAKVAAE
                     AIDGQAAEVDYIGMPAVCFTEPELATVGYSEAQAKEEGLAIKASKFPYAANGRALSLD
                     DTNGFVKLITLKEDDTLIGAQVVGTGASDIISELGLAIEAGMNAEDIALTIHAHPTLG
                     EMTMEAAEKAIGYPIHTM"
     gene            complement(15066..16358)
                     /locus_tag="O7798_000741"
     CDS             complement(15066..16358)
                     /locus_tag="O7798_000741"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499591.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-oxo acid dehydrogenase subunit E2"
                     /protein_id="HDC2863012.1"
                     /translation="MAFEFRLPDIGEGIHEGEIVKWFVKAGDTIEEDDVLAEVQNDKS
                     VVEIPSPVSGTVEEVMVEEGTVAVVGDVIVKIDAPDAEDMQFKGHDDDSSSKEEPAKE
                     EAPAEQAPVATQTEEVDENRTVKAMPSVRKYAREKGVNIKAVSGSGKNGRITKEDVDA
                     YLNGGAPTASNESAASATSEEVAETPAAPAAVTLEGDFPETTEKIPAMRRAIAKAMVN
                     SKHTAPHVTLMDEIDVQALWDHRKKFKEIAAEQGTKLTFLPYVVKALVSALKKYPALN
                     TSFNEEVGEIVHKHYWNIGIAADTDRGLLVPVVKHADRKSIFQISDEINELAVKARDG
                     KLTADEMKGATCTISNIGSAGGQWFTPVINHPEVAILGIGRIAQKPIVKDGEIVAAPV
                     LALSLSFDHRQIDGATGQNAMNHIKRLLNNPELLLMEG"
     gene            complement(16449..17426)
                     /locus_tag="O7798_000742"
     CDS             complement(16449..17426)
                     /locus_tag="O7798_000742"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017637695.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-ketoacid dehydrogenase subunit beta"
                     /protein_id="HDC2863013.1"
                     /translation="MAQMTMVQAINDALKTELKNDQDVLIFGEDVGVNGGVFRVTEGL
                     QKEFGEDRVFDTPLAESGIGGLAMGLAVEGFRPVMEVQFLGFVFEVFDAIAGQIARTR
                     FRSGGTKTAPVTIRSPFGGGVHTPELHADNLEGILAQSPGLKVVIPSGPYDAKGLLIS
                     SIRSNDPVVYLEHMKLYRSFREEVPEEEYTIDIGKANVKKEGNDISIITYGAMVQESM
                     KAAEELEKDGYSVEVIDLRTVQPIDVDTIVASVEKTGRAVVVQEAQRQAGVGAAVVAE
                     LSERAILSLEAPIGRVAAADTIYPFTQAENVWLPNKNDIIEKAKETLEF"
     gene            complement(17430..18542)
                     /gene="pdhA"
                     /locus_tag="O7798_000743"
     CDS             complement(17430..18542)
                     /gene="pdhA"
                     /locus_tag="O7798_000743"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002467471.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyruvate dehydrogenase (acetyl-transferring) E1
                     component subunit alpha"
                     /protein_id="HDC2863014.1"
                     /translation="MAPKLQAQFDAVKVLNDTQSKFEMVQILDENGNVVNEDLVPDLT
                     DEQLVELMERMVWTRILDQRSISLNRQGRLGFYAPTAGQEASQLASQYALEKEDYILP
                     GYRDVPQIIWHGLPLTEAFLFSRGHFKGNQFPEGVNALSPQIIIGAQYIQAAGVAFAL
                     KKRGKNAVAITYTGDGGSSQGDFYEGINFAAAYKAPAIFVIQNNNYAISTPRSKQTAA
                     ETLAQKAIAVGIPGIQVDGMDALAVYQATKEARDRAVAGEGPTLIETMTYRYGPHTMA
                     GDDPTRYRTSDEDAEWEKKDPLVRFRKFLENKGLWNEDKENEVIERAKADIKAAIKEA
                     DNTEKQTVTSLMEIMYEDMPQNLAEQYEIYKEKESK"
     gene            complement(18713..19339)
                     /locus_tag="O7798_000744"
     CDS             complement(18713..19339)
                     /locus_tag="O7798_000744"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499588.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YkyA family protein"
                     /protein_id="HDC2863015.1"
                     /translation="MKFGKTIAVVLASSVLLAGCTTDKKEIKAYLKQVDKIKDDEEPI
                     KTVGKKIAELDEKKKKLTEDVNSKDTAVRGKAVKDLIKNADDRLKEFEKEEDAIKKSE
                     QDFKKAKSHVDNIDNDVKRKEVKQLDDVLKEKYKLHSDYAKAYKKAVNSEKTLFKYLN
                     QNDATQQGVNEKSKAIEQNYKKLKEVSDKYTKVLNKVGKEKQDVDQFK"
     gene            19704..20255
                     /locus_tag="O7798_000745"
     CDS             19704..20255
                     /locus_tag="O7798_000745"
                     /EC_number="3.5.1.88"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499587.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide deformylase"
                     /protein_id="HDC2863016.1"
                     /translation="MLTMKDIIRDGHPTLRQKAAELELPLTKEEKETLIAMREFLVNS
                     QDEEIAKRYGLRSGVGLAAPQINISKRMIAVLIPDDGSGKSYDYMLVNPKIVSHSVQE
                     AYLPTGEGCLSVDDNVAGLVHRHNRITIKAKDIEGNDIQLRLKGYPAIVFQHEIDHLN
                     GVMFYDHIDKDHPLQPHTDAVEV"
     gene            20585..20707
                     /locus_tag="O7798_000746"
     CDS             20585..20707
                     /locus_tag="O7798_000746"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499586.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDC2863017.1"
                     /translation="MNDMMNLVINQIVIKLHYRDDWNEFIDIYSNTILLGLTIN"
     gene            20736..20954
                     /locus_tag="O7798_000747"
     CDS             20736..20954
                     /locus_tag="O7798_000747"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499585.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-dependent RNA polymerase auxiliary subunit
                     epsilon family protein"
                     /protein_id="HDC2863018.1"
                     /translation="MAVFKVFYQHNRDEVIVRENTQSLYVEAQTEEQVRRYLKDRNFN
                     IEFITKLEGAHLDYEKENSEHFNVEIAK"
     gene            20954..22651
                     /locus_tag="O7798_000748"
     CDS             20954..22651
                     /locus_tag="O7798_000748"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499584.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease J"
                     /protein_id="HDC2863019.1"
                     /translation="MKQLHPNEVGVYALGGLGEIGKNTYAVEYKDEIVIIDAGIKFPD
                     DNLLGIDYVIPDYTYLVQNQDKIVGLFITHGHEDHIGGVPFLLKQLNIPIYGGPLALG
                     LIRNKLEEHHLLRTAKLNEINEDSVIKSKHFTISFYLTTHSIPETYGVIVDTPEGKVV
                     HTGDFKFDFTPVGKPANIAKMAQLGEEGVLCLLSDSTNSLVPDFTLSEREVGQNVDKI
                     FRNCKGRIIFATFASNIYRVQQAVEAAIKNNRKIVTFGRSMENNIKIGMELGYIKAPP
                     ETFIEPNKINTVPKHELLILCTGSQGEPMAALSRIANGTHKQIKIIPEDTVVFSSSPI
                     PGNTKSINRTINSLYKAGADVIHSKISNIHTSGHGSQGDQQLMLRLIKPKYFLPIHGE
                     YRMLKAHGETGVECGVEEDNVFIFDIGDVLALTHDSARKAGRIPSGNVLVDGSGIGDI
                     GNVVIRDRKLLSEEGLVIVVVSIDFNTNKLLSGPDIISRGFVYMRESGQLIYDAQRKI
                     KTDVISKLNQNKDIQWHQIKSSIIETLQPYLFEKTARKPMILPVIMKVNEQKESNNK"
     gene            complement(23000..23662)
                     /locus_tag="O7798_000749"
     CDS             complement(23000..23662)
                     /locus_tag="O7798_000749"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499582.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TrkA family potassium uptake protein"
                     /protein_id="HDC2863020.1"
                     /translation="MGKEYVVIGLGRFGGSIVRELNALDMDVMAIDHDENRVNEYSDI
                     ATHAVVADTTDEAVMKSLGIRNFDHVIVAIGENIQSSTLTTLILKELGVKKVTAKAQN
                     DYHAKILNKIGADTVVHPERDMGRRIAHNVASASVLDYLELADEHSIVELKATEKMAG
                     QSIIDLDIRAQYGINIIAIKRGKEFIISPNPNINLEIGDILIMIGHDNDLNRFEKNIA
                     TR"
     gene            complement(23795..24814)
                     /locus_tag="O7798_000750"
     CDS             complement(23795..24814)
                     /locus_tag="O7798_000750"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499581.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome d ubiquinol oxidase subunit II"
                     /protein_id="HDC2863021.1"
                     /translation="MIYAFIGITVLWLFLFCYIIIASIDFGAGFFALHSKLTGDEKKI
                     NHLISRYLNPVWEVTNVFFVFFFVGFVGFFPESIKYLGTVLLIPGSIALIMISLRNSF
                     YAFENYGQDTKLAWMIMYGVSGLLIPASLSTALTITEGGYINVRNNVIDLDWVQLLLS
                     PFAWSVVFLAIISVLYISSGFLTYYAKKANDEPAYNLTRQWHIFLGPPMIIICLFVFL
                     SLRIQNSEHFYSAVFDYWWMFGISFLFFALASLLTFFKKKHGLAFVFVILQMMFAFFG
                     YGISKLPYLLYPFVKITDAYVNPEMGWTLVIVFILGLLLLLPSLILLLRLFVFDKEYV
                     EGKKS"
     gene            complement(24811..26172)
                     /locus_tag="O7798_000751"
     CDS             complement(24811..26172)
                     /locus_tag="O7798_000751"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499580.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome ubiquinol oxidase subunit I"
                     /protein_id="HDC2863022.1"
                     /translation="MDTVEISRFLTAMTLAVHIIFATIGVGMPLMFAIAEFLGIRKND
                     LQYIAMAKRWAKAYTITVAVGVVTGTIIGLQLSLIWPTFMEMGGHVIALPLFMETFAF
                     FFEAIFLSIYLYTWDRFKNKWTHFLISIPVIIGGSFSAFFITSVNSFMNTPAGFELKN
                     GKMVNVQPIEAMFNPSFIVRSFHVITTAGMTMAFVIASIAAFKLLRNRQPKDTVYHKK
                     ALKMSMIVGFFSTLLSMLAGDLSAKFLHKFQPEKLAAYEWHFDTSSHAKLLLFGVLDE
                     KTQQVKGAIELPGLLSFLADNSVKTKVQGLNDFPKSLHPPMIVHYFFDLMVTMGILCF
                     VISGVYVLTLMFKKLRKFSTHKWMLYGILLTGPASMLAIEFGWFLTEMGRQPWIVRGY
                     MRVAEAATQAGGITFVTILFGILYIILMYTCAYVLIRMFKNKPAYEDVNRLAKKQGGE
                     IEK"
     gene            26370..26603
                     /gene="nrdH"
                     /locus_tag="O7798_000752"
     CDS             26370..26603
                     /gene="nrdH"
                     /locus_tag="O7798_000752"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499579.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutaredoxin-like protein NrdH"
                     /protein_id="HDC2863023.1"
                     /translation="MSEIIVYTQNDCPPCTFVKNYLNEHHIDFEERNINNQQYRNEMI
                     DFDAFSTPFILLNGNPMYHVDLDEINKVLNIQD"
     gene            complement(26840..28558)
                     /gene="ptsP"
                     /locus_tag="O7798_000753"
     CDS             complement(26840..28558)
                     /gene="ptsP"
                     /locus_tag="O7798_000753"
                     /EC_number="2.7.3.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499578.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoenolpyruvate--protein phosphotransferase"
                     /protein_id="HDC2863024.1"
                     /translation="MSKLIKGIAASDGVAIAKAYLLVEPDLTFDKNEKVTDVEGEVAK
                     FNSAIEASKVELTKIRNNAEVQLGADKAAIFDAHLLVLDDPELIQPIQDKIKNENANA
                     ATALTDVTTQFVTIFESMDNEYMKERAADIRDVSKRVLSHILGVELPNPSMIDESVVI
                     VGNDLTPSDTAQLNKEFVQGFATNIGGRTSHSAIMSRSLEIPAIVGTKSITQEVKQGD
                     MIIVDGLNGDVIVNPTEDELIAYQDKRERYFADKKELQKLRDADTVTVDGVHAELAAN
                     IGTPNDLPGVIENGAQGIGLYRTEFLYMGRDQMPTEEEQFEAYKEVLEAMGGKRVVVR
                     TLDIGGDKELSYLNLPEEMNPFLGYRAIRLCLAQQDIFRPQLRALLRASVYGKLNIMF
                     PMVATINEFREAKAILLEEKENLKNEGHDISDDIELGIMVEIPATAALADVFAKEVDF
                     FSIGTNDLIQYTLAADRMSERVSYLYQPYNPSILRLVKQVIEASHKEGKWTGMCGEMA
                     GDETAIPLLLGLGLDEFSMSATSILKARRQINGLSKNEMTELANRAVDCATQEEVIEL
                     VNNYVK"
     gene            complement(28561..28827)
                     /locus_tag="O7798_000754"
     CDS             complement(28561..28827)
                     /locus_tag="O7798_000754"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499577.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphocarrier protein HPr"
                     /protein_id="HDC2863025.1"
                     /translation="MEQNSYVIIDETGIHARPATMLVQTASKFDSDIQLEYNGKKVNL
                     KSIMGVMSLGVGKDAEITIYADGSDESDAIQAISDVLSKEGLTK"
     gene            complement(28981..29523)
                     /locus_tag="O7798_000755"
     CDS             complement(28981..29523)
                     /locus_tag="O7798_000755"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499576.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF697 domain-containing protein"
                     /protein_id="HDC2863026.1"
                     /translation="MGFKNNLTSNLTNKIGNSVFKIENVDGKGAMPTTIQELRERRQR
                     AEAIVKRKSLMSSTMSVVPIPGLDFGVDLKLMKDIIEDVNKIYGLDHKQVNSLGDDVK
                     ERIMSAAAIQGSQFIGKRISNAFLKIVIRDVAKRTAAKQTKWFPVVGQAVSASISYYF
                     MNKIGKDHIQKCENVIKNVM"
     gene            complement(29577..30749)
                     /locus_tag="O7798_000756"
     CDS             complement(29577..30749)
                     /locus_tag="O7798_000756"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499575.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent rRNA methyltransferase"
                     /protein_id="HDC2863027.1"
                     /translation="MKIATLNKGKETKYFNGYPLIEEEDIYSQDHLKEGDIFQIVTDK
                     SQYVATAYVGRQHKGLGWVLTYDKAQQINTAFFVKLFNTALAERDYYFNIDGTNAFRL
                     FNAEGDGVGGLTIDNYDGHLLIQWYSKGIYKFKYAILEAVRKVFDYKSIYEKVRFKDS
                     EYSGGFVEGDAPEFPIVIEENFTFYNVDLEDGLMTGIFLDQKEVRKKLRDQYAKERHV
                     LNLFSYTGAFSAIAASEASSTTSVDLANRSRSLTEENFGLNAIDPKSQYIYVMDTFDF
                     YKYAARHGHSYDTIVIDPPSFARNKKRTFSVQKDYDKLINGALNILSSEGTLLLCTNA
                     SVYPLKQFKNTIKKTLEESGVDYELTEVMGLPKDFKTHPHYKPSKYLKAVFVNIRH"
BASE COUNT        10112 a         5615 c         4439 g        10837 t
ORIGIN      
        1 ttatatacat gacacagtca taatcacaaa tattaacagg tctcttgagg taatttatag
       61 aatatttgtt tacttaatat cgtgaattgc taaaacccaa taaaagtgac tgacatgtca
      121 tcaagaagac aacataacag ccactttaat cagtaattaa actataaata taaaatcggc
      181 gcagctcaat tgtcgatatc tcacgccatt ttaatatgct tatatattaa accttaaaca
      241 agtgtaaaag cttcatgtaa ttttgaaagt tctttctcaa gacgtaacat aatttgtttg
      301 ccatcttcgc ggtcaactaa acctaattta acagcaaaat caacttcttt ttgaagtcca
      361 aacatttgtg tatctagtac ttcttcatat aatgggcatg aaggtaatgt taaattatct
      421 agttgaactt taatcagatg caagatttca tcagcatctt tagtcaattg tttcaaagct
      481 gcatttttca ttgttgcttg tttcgccatg acacgctccc cctctatata aattctcaag
      541 tcttactaaa agtttatctt actaaatatt aaaaagcaag tagatttaaa atgtgtcgtt
      601 agcaatttgt gttaaaataa tgctatatac attgataggg agtgggaaaa tgatacaaat
      661 taaaggagcc gtaaagtttc ctataacatt agatagtacg acttggattt tcgatgatag
      721 aaaagttagc atcgaagatt tagaaaaagg tgtatttgat ggttcaaaac caatcgactt
      781 tgaagataat catgaatgga atcgtgctat cctagaagga caaactaatc cgcctacttt
      841 aaattcagaa ataaaatata aaaaacgtgc catgttagaa ggttcatttg tcattaatat
      901 gacaccattt ttcaaacatt ccgaaccaca tgactctgca actactattc gattatcaaa
      961 tgagcatgat catttagata taccgataga tctattaccc tatttatttt tccaatttgc
     1021 aaaagacggt aaacgacttt acagcgataa tggtgtagat agttttattt acaatcaaga
     1081 agatggttat tcatatcgaa tcaaccatgt aactcatatt gaggtgattt aatttgagac
     1141 aagtgcaatg cattatctgt gatgcaaaag tatttataga tgagcgcaca actgagtcta
     1201 aacgacttaa aaacaatcct attcgaacat ttatgtgtga tgattgtaaa agtcgattag
     1261 acacacctaa acaacgtgcg caacactatc cgctcgatta atatctgaat aaacaagtta
     1321 gaaatttgaa aatgtgaaag taacaggaaa taatagcatt taaacacttt ttcaaatatt
     1381 atatgccaaa agagaagcta agcaactttc atcgctcagc ttctctttta ttatgttaaa
     1441 ttattcgttt tcttgcatca tttgtttgat acgctttgct tctttttcac gaacattttt
     1501 gtttaaaatt ttctttctta aacgtatact ttctggtgta acctcaacaa gttcatcatc
     1561 attaatgaat tgtaacgctt cttccaatgt tagaatacgc ggtctattca ttgtttgtgt
     1621 ttggtctttc gttgcagaac gtacgttagt ttgatgtttt gttttagtga tgttaacagt
     1681 taaatcattt tcacgattat gttcaccaac aatcatacct tcataaactt cagtaccagg
     1741 ttccatgaag tttacacctc tatcttcaag tcccaaaatg gcataagtac ttgcagaacc
     1801 ttgatccatt gaaattaatg caccattacg acgaccgcca atttgtgctt taatacgtgg
     1861 tctaaattct tcaaatgtat ggttaataat accgtaacct cttgtcattg acataaattc
     1921 agtcgtataa ccaatcatac cacgagccgg tacattaaag attaaacgtg taagtccatt
     1981 atcagttgta gtcatatcaa ccatttcacc tttacgtgca cctaatgatt caataacagc
     2041 acctgcattt tcttgtggca cttcacattg cacacgttca aatggttcac acattacacc
     2101 atctatttct ttaataatta cttgtggttt tgaaacttgt aattcataac cttcacgacg
     2161 catattttca ataaggattg ataaatgcaa ttcaccgcga ccagcaacta cccatgtatc
     2221 tggagaatct gtgttagaaa ctttcaaaga tacatctgtt tctaattgtt gatttaaacg
     2281 ttcttgaatt tgacgtgctg ttacaaagtc accttcacgg ccagcaaatg gagaattgtt
     2341 aactttaaat gtcatttcaa gagtaggctc atcaatacgt agaactggca atgcttcttg
     2401 atggtcatgt ggtgttacag tttcaccaac attaatgtct tccatacctg aaacagcaat
     2461 taaatctcca gcttgtgctt cttcaatttc taaacgtttt aatccaaagt aaccaaagat
     2521 tttagttaca cggaagtttt tcactgtacc gtctaattta attagtgata cattatctcc
     2581 gacacgcatt ttacctctga atacacgacc aataccaata cgtccaacat aatcattgta
     2641 gtccaacaat gctacttgga attgtaatgg ctcatcactg ttatcaattg gagctggtac
     2701 ataatcaata attgtttcat ataatgattg taaattatca tcttgctttt caggatctaa
     2761 gctagctgta ccatttactg ctgaagcata aacaacaggg aattctaatt gttcatcgtt
     2821 tgcttctaat tcaataaata aatctaaaac ttcatctaca acaccctctg gacgtgctga
     2881 tggtttatca attttattaa caacaacaac aggtttcagg ttttgttcta gcgctttttt
     2941 aagtacaaaa cgtgtttgag gcattgtacc ttcatacgca tctactacta agacaacccc
     3001 atcaaccatt ttcataatac gttctacttc tccaccaaag tctgcatgtc ctggtgtatc
     3061 caaaatatta atacgtgtac ctttataatc aacagccgta tttttggcta gaatcgtaat
     3121 tccacgctct ctttcgatat cgttagagtc cattgcacgt tcatcgacat gttcattttc
     3181 tctgaatata ccagattgtt ttaacaactc atctactaaa gttgttttac catggtcaac
     3241 gtgagcaata attgctatat tgcggacatc ttctctttta ttagtcatat aaatagtttc
     3301 cttctttctt aagtaaaatc ccacttttaa ttacaacttt tttattatat catataattg
     3361 agaaaagata agcaaaaggt ggggatagga tgaaacaaaa aaaatctaaa aatatctttt
     3421 gggtattttc tatattagct gttgttttct tagtattatt tagttttgct gttggtgcat
     3481 caaatgtacc aatgatgatt ttaacattta tattactcgt tgcaaccttt ggaattggat
     3541 ttactacaaa gaaaaaatat cgagaaaacg attggctata agttatatcg acaataacac
     3601 gcgttgattt aagaccacac atgttcatga tgaacattta actggtttta tattggcgcg
     3661 tgtttttatt atttaaggta taaaagcgta atatgttacc taattgttag gactacatat
     3721 tacgcttttg gtaattattt tgattttctt ttaaatcgtt gttcatgtaa ttgtattaac
     3781 gcatcatggt ggggctctaa ataatcattg ctaatttctt gatggagacc acgatttcca
     3841 actaagattg aatttggacc actaattgtt aatggttctc ctagtaaatt ggaagcttgt
     3901 ccatttactt catataaaat aaccaatccg ccagcaaaat cccatggttg aagtcttggc
     3961 gtcatatatg cttctaaatt acctgtagca actgaaacga tttcaagcgc tgcactacca
     4021 tatgcccttg cacttctaga atcattaaca atttctttaa agatttctcc taaaattggt
     4081 ttagttaacc agttcggatt gatcccaata atgctttgtc ttagattaga atcattcaat
     4141 ggtttcaagg gttggctacc acgatatgca ccttccccta ctttagcatg atataagaca
     4201 tcagccataa catcatatac aaaacctgca taaggtttac catcgatata aataccaatt
     4261 gaaattgcga aattttcttg ttgatgaaca aaattcaatg taccgtctat tgggtcaaca
     4321 atccataccg tacctttgga agtatcgatg tcatgaccat gcccttcttc acctaatact
     4381 tgatgattgg gatatgtttc taaaattgta tcaaaaatga aatcttctgt tgctttatct
     4441 acatttgtaa caaggtcatt cggatttgac tttgtttcaa ttgttaaatt ttgctccatc
     4501 aattgtttaa ttctaattcc tgcttcttga ataagtcctt gggcaaatcc ataaagtgcc
     4561 ataacatcat ctcctaacat ctttattata catcaacatt ttataaaaat aacttcttat
     4621 gataaaaatg aaaatactaa ttttaatgag agcgtcttaa gccgcaattg ataaaacata
     4681 tgctacaata tttttaaaca ctatacagga ggtactctat gacaaaatat acatttaaac
     4741 ctaaagattt caaagcgttc aacgtagaag gcttagacgc acgaatggaa gctttaaacg
     4801 aatacatacg accacaactc cgtgaattag gagaatattt tagtgacttc tttacaagtc
     4861 aaactggtga aacattttat cctcacgtag caaagcatgc tagaagaagt gtgaatcctc
     4921 ctaaagatac atgggttgct tttgcaacaa acaaaagagg ctataaaatg ttacctcatt
     4981 tccaaattgg tatgtttgaa gatcaactgt ttgttatgtt tggaatcatg catgaagcaa
     5041 aagataaagc aacacgtgca aaagtttttg aaagaaaatt taaagctatt caacaattac
     5101 ctgatgatta tcgtgtttgc ttagatcata tgaaacctga taaaccattt attaaagatt
     5161 taacggatga tgatttaata gaagcgatac aaagagccat caatgtgaaa aaaggtgaat
     5221 tctttatagc gcgtgcaatc acaccacaag ataaaagatt aaaaagtgac aaagcattta
     5281 ttgcattttt agaagaaacc ttcgatcagt tcttaccatt ttattctgca taaataactt
     5341 tgtttaaata atagagcact taatcacatc catgatttcg tgctcttttt tcttaatatt
     5401 aaatcgaacg ttcaacataa taattcatac ttttaaaaaa ataaaataaa tttaggttga
     5461 cataaacatt ttattaggtt attatattgt ccataagaag tagaggtgag tcaaaatgaa
     5521 taataaacga cattcaacaa atgaacaatt aagtttagac gaaataaaca atacaattaa
     5581 attcgatcat cgcagttcaa ataaacagaa atttttatca tttcttggac ctgggttatt
     5641 agtcgctgtt ggttacatgg atcccggaaa ctggataaca tcaatgcaag gtggcgccca
     5701 atatggctat actttgctat tcgtaattct tatttcaagt ttatcagcaa tgttacttca
     5761 aagcatgaca gtgagattag gaatagcaac aggtatggac ttagctcaaa tgacacgaca
     5821 ttatttatca agacctattg ctataatctt ttggatcatt gcagaactag caattatcgc
     5881 tacagatatt gctgaggtta ttggtagtgc tattgctctt aatctcctat ttaacatacc
     5941 tttaatcgtc ggtgcactaa taactgtact tgatgtattt ttactacttt ttataatgaa
     6001 atatggtttt agaaaaattg aagctattgt tggtacatta attttcacag tgttattcat
     6061 ctttatattt gaagtctata tttcatcacc acagttgaat gctgtgttaa atggatttat
     6121 accacatagt gaaatcatta caaataacgg cattctctat attgcattag gtattattgg
     6181 cgctacaatt atgcctcata atttgtactt acattcatca attgtacaat ctagaacata
     6241 ctcaagacat aacaatgaag aaaaagcgca agcgattaaa tttgctacga tagattcgaa
     6301 cattcagtta tcaatcgcat ttgtagtcaa ttgcttatta ttagtgttag gagcatcact
     6361 atttttcaac tcaaatgctg acgatttagg tggtttctat gatttatatc acgccttaaa
     6421 aactgaacct gtactaggtg caacaatggg tgcaatcatg agtacattat ttgcagttgc
     6481 attattagcg tcaggtcaaa attcaacgat tactggtact ttagcaggac aaattgtaat
     6541 ggaaggattt ttaagattac acataccaaa ttggttaaga cgtttaatta cacgttctct
     6601 tgctgtcatt cctgttatcg tatgcttaat catttttaaa ggtaatgcag ctaaaattga
     6661 gcaactactt gtattctctc aagtattttt aagtattgct ctgccattct gtttaatacc
     6721 attacaattg gctactagta ataaagactt gatgggacct ttctataata aaacatgggt
     6781 taatatcatt tcatggacac ttattattat tctaagtatt ttaaatgtct atttaatcgt
     6841 tcaaacattc caagaactac aaagttaaaa ataaaaccat taaaatgttg gttgtatcta
     6901 ataattaaca acttaacatt ttaatggttt ttcttttgct atgaacatat taatgataaa
     6961 tatactcatc gtccttatgt gttgtttctt ttgattcttt tttagaaatc aacataatca
     7021 tcacgataac ccataagaca attgcaatta aattaagagc catcaaactt acaattatcg
     7081 cgataacaaa aagtataatc gataattttc tacgtccttt aatacaaatt gtcgcaaata
     7141 taccataaag tgttgaaatt aataaaataa ttgctaatgc acccattgtt gtctgaagca
     7201 tatctaaaga aaccttgcca ccgttctgag ataattgctt cgctaattct tcacgttgtg
     7261 atgcattacc actttttaaa gaaaaatagg atagccccat aactaataaa taaataatac
     7321 taatactatt tgcaatccaa gccatgatta attcaggttt tctattcatc ttaaaatcct
     7381 ttctttgttt aatattttaa taagtatact acgagcctat agatatacgc acattaaatt
     7441 acttgtatat taacatattt ttcatctaat ttttataata aacatctgaa ttcagattga
     7501 tgataattta ggtgtatagt aatgagaaat cgtcatttaa aattatgaca cctaaacact
     7561 ttaattaaac gttatcgata attaacctca tataaaaacc cagattaata agcaaaagac
     7621 ctctgcttac taatctgggt atcatcaata tttattcttg ctcttttttg tccttaactt
     7681 cacttgaatt gcgttcttca gaaatatcat tgttgtaaat ttgacgtcgc tcttcaaaat
     7741 tcattcgacg ttgactaact gcgctaggtt gatttttcct acgttctttc attcgttggt
     7801 tataagcttt acgtttttct tttttcttag ctttaatttc agctttttct cgcttttgtt
     7861 gtgctttcaa ttcttttgga tcaacttcag gttctgcata ataaccatca tcttcaatac
     7921 ctagttcttc agtacttttt tgtttgtatt tagcctgtct ggataatact gatggttctt
     7981 cctcagtgcg ctcatcatga ttatattcac tttcaactgc acgtttagga aattgatcat
     8041 atttatctct ttcctgttct tgatcatata cagtatttga tttatccaat tctttttcat
     8101 atttaggcac atcataataa tcatctttcg gttggaggcg ctcatacaca ggttcacgat
     8161 aatcataaat cggtccgtta tactcttcat aatattgtgg cgcaaccatt tcaactttat
     8221 cttttcttat aaatagcatc atcgcaataa taaagaataa tatcggaatg attaaagtaa
     8281 cgataagtaa aactaaagga atcgttacaa ttgctgatat taagaataag aaacctgaca
     8341 agattcttat attcatagat atgagagcta aaaatgaaat caacaaacaa acaataaagt
     8401 aaacgataat agcccatata ccattttgta accatattac aaattgtgtt gtattatagc
     8461 catttccagc taataattgc tggataaatg cattattgtt taatgtattt tcaagattag
     8521 caatcgatgt gttattactg aatgaaacaa gtgctataaa catcgtaatg acagtaagca
     8581 ctaataacat cacccaacat aaccaaccta gaactttttc agttaatcta cttactggac
     8641 gtttaatttg agtaaattgt tctccagtca ttcgttacaa ctccttatag tacttatccc
     8701 gttattataa ctaaatatac agtaaataac tactatttat gattttattt taatgacatt
     8761 ttgaaattca aaaagttttc attgtattca cttaaaactt caggtcctaa atctttataa
     8821 acttcaaggc gttcttgctc tttcttagtc ggataaaaac gatggtcgtc tttaatctct
     8881 ttaggcaaca attgtcgagc agccttgttt ggcgttgcat agcctacgaa ttctgtattt
     8941 tgcttgttat ttttagcatc taataaaaaa ttcataaatt tatatgcacc ctctttattt
     9001 tgtgccgttt ttggaattac catattgtcg aaccataaat tcgatccttc tttaggaata
     9061 acataattat atttatcccc ttcttgcact agaggtgctg caacaccact ccaaacaacc
     9121 gctatgttac cttcattttg ttgaagcatc atggtaattt catcacctac gacacctctt
     9181 acttgtggtg ctagtttggt taaatctcgc tctgcttctt ttaaatggtg cgaattacgg
     9241 tcattaagat tatacccaag tttattcaaa ctcatgccta taatctctct agcaccgtca
     9301 actagtaaaa tttggttttt aaatttagga ttatacaatg acttccaact atcaaatgat
     9361 tcatttggat acttttcttt attatataaa atacctacag ttccaaagaa ataaggtaaa
     9421 gaatatttat tgcctctatc aaatgacata ttcatataat ctgaatctaa atttttaata
     9481 ttaggtacct tattatgatc tattggtaac aataaatgat ctcttttcaa tttttgaact
     9541 gtatattcac taggaaaagc aacatcataa tgtgtaccgc cattgcgaat tttggcttcc
     9601 atcgcttcat ttgaatcgaa agtttcataa acgacttgaa tgccagtttc tttttcaaat
     9661 ttcttaatta actctggatc aatatattcg ccccaattgt atacgtaaat tttttgattt
     9721 gtatgcactt gttctttaga tttaaaccaa tgacttaaag taagacaaag catacccaca
     9781 actaatgcac ctataatgag ttgtaaaaat cgtttcatta ttttacacct cgcttgatta
     9841 gttttttctt atttatcacg tattgaatca aataatatcc tagtattcct aatacaataa
     9901 cagcaaacaa taatgttgaa atcgcattaa tttccatact aattcctttt ctcgccatag
     9961 cataaacttc aactgataac acactaaagc cattaccagt aacgaagaaa cttactgtga
    10021 aatcgtctag tgaataagtt aaagccataa agaatcctcc tataatagaa ggtaaaatat
    10081 taggaataat aatgttgctt aataattgtg gttcagtcgc tcctaaatct cttgcagcat
    10141 ttaacatatt attattcatt tcatacagtt gtggtaagac gataatcaca actataggta
    10201 tgcaaaatgc aatatgagat attagaactg tccaaaatcc taaaccaaga ccagtaaaat
    10261 ggccaatcgt tgtaaacata attaagaatg atgcacctat gacaacgtcg gatgatacca
    10321 tcaagacatt attcaatgtt agtaaagtta ctttaaactt tttatttctt aaataataaa
    10381 tagcaatggc accaaatgta ccaataactg tagaaattga ggctgctaaa agtgctacag
    10441 ctatcgtatt aaaaatgacc gacattaaat gatcattttg aaataatgat tgataatgct
    10501 ctaatgtaaa atgttcaaag tgaatcatat taccagccga attgaatgaa tagaacatta
    10561 aaaagaatat tgggatgtat aaaatcgcta aaagtatccc gatatacagc tttccatacc
    10621 atttcatatg attcaccctc tcccattaga tgattttgta atgattaaaa tgaatgccat
    10681 aaatacaatt aagaatatag ctatagttga tcccatacca taattttgaa ttgttaaaaa
    10741 ttgttcctct attgccgtac ctatatttat gactttatta cctgcaatta atcttgtaat
    10801 cataaataat gaaagtgatg gaataaaggt tacttgaatc ccagtcataa caccttcttt
    10861 tgttaacggc atgattactt ttctaaaagt atagaaagga ctggcaccta aatcacttga
    10921 ggcctgcaat aaattattag gaattgcttt catgctatta aatataggta aaatcataaa
    10981 tggtatataa atgtaacttg ccactactaa aaacgcacca gttgtaaata acaaattgaa
    11041 tgatggtaaa ttaaataagt ggaaaaattg attaatcacg ccatcatgac ttaataaacc
    11101 tataaaagca tatgtcttta acaataaatt tatccatgtt ggaataatca ttatcattaa
    11161 taagatattt tgaaatttcg aacgagtaat ataataggca gctggataac tgatagtcaa
    11221 ggtaataatt gttattgaag cggcatataa aattgaatat gcaaacattt tcaaatattt
    11281 tgtagtaaaa atttgttgat aattcgtgaa actaaaatgt ccattgatat ctaaaaatga
    11341 aaaataaatg agtaatacaa ctggtacaat aataaatata accatccata gtaaatacgg
    11401 gattaagaga aatttattag tattacgcat tgtctacttc ctcatagctt tcaatacgtt
    11461 tatcaaattc ttcttctgtt tctccaggaa ccataatatg aatggcttca ggatcaaaat
    11521 aaagaccaac ttcactgcct acttcagctt ttttagtcgt ttgtattacc cattcataac
    11581 ctttattgtc tatacaacat atttcatagt ggacccctct aaataacata gaatcaacag
    11641 ttgctttaaa taatccttct tcagctttga ttaatgatat atcttctggt cgaataacga
    11701 cttctacttt tttattttca ggaataccca tatcgacaca ttcgaaatct tgcccataaa
    11761 tattcacgac ataatctcta accatgcgcc cttcaacaat attagattct ccaataaaat
    11821 cagctacaaa tcgattcact ggttcgtcat atatatctgt tggtgtgcca aattgttgaa
    11881 ttttcccatc ttttaataca aaaagaaagt cacttaatgc taacgcttct tcttgatcat
    11941 gtgttacaaa tataaatgta atacctaatc tagattgcaa ttctcgtaat tcatattgca
    12001 tttcagtacg caatttcaaa tctaatgcgg ataaagattc atctaacaat aatatttctg
    12061 gttcatttac gatagcacgt gcaattgcaa cacgttgctt ttgtccgcca ctcatttcat
    12121 taatatttct tttttcataa cctgaaagtt ttactaattt taatgcctca gttacttttt
    12181 gatcaatttc ggtttttgat aattttttta atttcaaacc aaaagcgata ttatcataga
    12241 cgtttaagtg tggaaataat gcataatctt gaaagactgt attcacttta cgtttatttg
    12301 gtggtaaatt accaattggt ttgttttgat aaatcacttc accactgtca ggatattcaa
    12361 accctgcaat taattttaaa attgttgttt taccacaacc tgaaggacct aataatgtat
    12421 aaaagtatcc tgattcaata tcaatatcta tgtcatctaa gatattaaga tcatcatagc
    12481 ttttactaac tgattttaat gataataacg gttccaaata agatcccccc tataaatatg
    12541 aagctgtcgc tacaataagt attcgtgttt cattgtttga ttcgtttgac aaacgatgat
    12601 tatctcgtgc tttaaaatac aaaacgtctt cttcttgtgc ttgatatatc tctttgccta
    12661 aattaagtgt tatctgacct gacatacaat aaataaacgt atcagactct gatggattaa
    12721 aatttttata tgatgctcca ggctttaaag ttaatattaa tggctccata tcatattcat
    12781 ttgactttga aactaaccaa tttaatatat aaccttcatc atactcatca taaataactt
    12841 gttcttcctt cttgtataat actttttcat tttcactgtc tttaaaaaat tcacttggcg
    12901 tcgttcctaa cacctctata atatttaaga aagtttccat acttggtgag gcatgttcac
    12961 tttctatttg tgaaatgtag cctttcgata agtctgtacg ttcagcaagt tcttcttgcg
    13021 ttaaattttt aattcttcta agatttttaa ttttattacc tatgttcatt tatttttcca
    13081 cctaaaaaag ctatattaag tttactttta tcaaacattt tgtttaacac ttgataaagg
    13141 tatcaaaata tagctttatt agcaatagtt ttaaagaaaa attcctatta aattgtgttg
    13201 atttcgaacg aattattttt tagctgttac tctttgttct tcagagtgag tttttacatc
    13261 ttgaactgct ttgtaactat tatagccact acttttttcg aaagtattaa aaatttgttt
    13321 ttcctctgct ttagcaggca caatttcttt aaatctttta tatgcaccca taaagtcgcc
    13381 tgccgtcacg ccggattcat aatacttctc tacatgatta aagaaattta tcactgaaat
    13441 catctcttca ttactccagt ctaaatcaat tggatactca tattccattg ttgaaccctc
    13501 catttcaatt cttttgttag catcgctagt ataacatgca tgtcacatgt taacgatatc
    13561 tcaaatcaat ttccttacat tactttacct aaaacaaaaa agccgtagca tatgctacag
    13621 cttttaatga ctgaatcttt atagataatc agttattaca ttgtatggat tgggtatccg
    13681 atagcttttt ctgctgcttc catagtcatc tcacctaatg ttggatgtgc atggattgtt
    13741 aatgcgatat cttcagcatt cataccagct tcaattgcta aacctaattc agagataata
    13801 tctgatgcac cagtaccaac tacttgagca ccgattaaag tatcatcttc tttaagtgta
    13861 ataagtttaa caaatccgtt agtatcatct aatgataatg cacgaccatt tgctgcatat
    13921 gggaatttag aagctttaat tgctaaacct tcttctttag cttgcgcttc tgaataacca
    13981 actgtagcta attctggttc agtaaagcat actgctggca taccaatgta atcaacttca
    14041 gcagcttgac catcaattgc ttcagcagca actttagctt catagctagc tttgtgagca
    14101 agtggtaaac ctggaacgat atcaccaatt gcatagatat tgctgataga cgtacggctt
    14161 tgtttatcaa cttctaataa tccacggtca gcgaatttaa cacctaattc ttctaggcct
    14221 aattcgtctg tgtttggacg acgacctaca gttactaata cataatcagc ttcgattgtt
    14281 ttctcttcgc ctttagcttc ataagtaact ttaactccgt tatctgtttc ttcagctgat
    14341 ttagccatag cttcagtaac gatttcaaca cctttttctt tcataccttt tttaacaggt
    14401 tgtgtcattt gtttttcgaa gccacctaag atatctttag caccttcaag gatggttact
    14461 tctgaaccaa agttagcaaa tgctgtacct aattctgatc caatgtatcc tccaccaact
    14521 acaactaatt tacctggtac ttcttgtaag tttaaagcac ctgttgagtc gataacacgt
    14581 ttaccgaatt tgaaattagg aatttcaatt ggtcttgaac ctgttgcaat gattgcattt
    14641 ttaaagttgt atgtttgtgc gctcttttcg tccataacac gtaagctatt gttatctacg
    14701 aaatatgctt cacctttaac gatgttaact ttgttacctt taagtaagcc ttcaacacca
    14761 ccagttaatt tattaacaac tgatgatttg aattcttgaa ctttttggaa gtttaaagaa
    14821 acactttcag caataacacc taagttttca gaatgttgtg cttcaacaaa acggtgagaa
    14881 gcatgtagta atgcttttga aggaatacat cctacgttta agcaaacacc accaagatta
    14941 cctttctcaa cgattgttac tttttgtcct aattgagctg cacgaattgc tgcaacgtat
    15001 ccaccaggac ctgctccgat tactatagta tctgtttcaa ttgggaaatc tccaactacc
    15061 atgttttacc cctccattaa taataattct ggattattta ataaacgttt aatgtgattc
    15121 attgcatttt ggccagttgc accatcaatt tgtctgtggt caaagcttaa tgataatgct
    15181 aatactggtg ctgcaacaat ttctccatct ttaacgatag gtttttgagc aatacggcca
    15241 attcctaaga ttgctacttc tgggtgattg ataactggag tgaaccattg tccaccagct
    15301 gaaccgatat tactgattgt gcatgtagca cctttcattt catcggctgt taatttacca
    15361 tcacgtgctt taacagctaa ttcattaatt tcatctgaaa tttggaaaat agacttacga
    15421 tcagcatgtt taacaacagg tactaataat cctctatcag tgtctgctgc aataccgata
    15481 ttccagtaat gtttatgaac gatttcacca acttcttcat tgaatgaagt gttaagtgct
    15541 gggtattttt tcaatgcaga aacaagtgct ttaacaacat aaggtaagaa tgttaactta
    15601 gtaccttgtt cagctgcgat ttctttaaat ttcttacggt gatcccataa tgcttgaaca
    15661 tcaatttcat ccattaatgt tacatgaggt gcagtatgct tagagttaac cattgctttc
    15721 gcaattgctc tacgcatagc agggattttt tcagttgttt ctgggaagtc gccttctaat
    15781 gttactgctg caggtgctgc aggagtttca gcaacttctt cacttgtagc tgaagcagct
    15841 gattcatttg aagctgttgg tgcaccacca tttaagtatg catctacatc ttcttttgta
    15901 atacgaccat ttttaccaga tccagaaact gctttaatgt taacaccttt ttcacgtgcg
    15961 tatttacgta ctgaaggcat tgctttaaca gttctgtttt catctacttc ttcagtttga
    16021 gtagctacag gtgcttgctc tgctggcgct tcctctttcg caggttcttc tttagatgat
    16081 gaatcatcat catgaccttt aaattgcata tcttctgcat caggtgcatc gattttaaca
    16141 ataacgtcac caactacagc tactgtacct tcttctacca taacttcttc tacagtacca
    16201 gatactggtg atgggatttc tactactgat ttatcgtttt gtacctcagc taaaacatcg
    16261 tcttcttcaa tagtatctcc agctttaaca aaccatttta caatttcacc ttcgtggata
    16321 ccttccccga tatcgggtaa tctaaattca aatgccacgt ttttgccctc ctaagatttc
    16381 gtaaattaaa catttcattt taatcaatga gactaaaata cgctaacttc gttaactttt
    16441 aaaatgtatt aaaattctaa agtttctttt gctttttcga tgatgtcatt tttgtttggt
    16501 aaccaaacat tttcagcttg agtgaatgga taaattgtat ctgctgctgc aactcttcca
    16561 ataggtgctt ctaatgaaag gattgcacgt tcacttaatt cagctacaac tgctgcacca
    16621 acaccagctt gacgttgtgc ttcttgaact acaactgcac gaccagtttt ttcaactgaa
    16681 gctacaattg tgtcaacatc gattggttga acagtacgta agtcaattac ttcaacagaa
    16741 taaccatctt tttcaagttc ttctgcagct ttcattgatt cttgaaccat tgcaccgtat
    16801 gtgatgattg aaatgtcatt accttctttt ttcacattag ccttaccaat gtcaattgta
    16861 tattcttctt caggtacttc ttcacggaat gaacgataca atttcatatg ctctaagtat
    16921 acgactgggt cattacttct aatagaagaa attaataaac ctttcgcatc gtatgggcct
    16981 gaaggaataa caacctttag acctggagat tgagctaaaa taccttctaa gttatctgcg
    17041 tgtaattctg gtgtgtgtac gccaccacca aatgggctac gaattgttac aggtgcagtt
    17101 ttagtaccgc ctgaacggaa acgagtacgt gcaatttgtc cagcaatcgc atcaaatact
    17161 tcgaatacga aacctaagaa ttgtacttcc ataaccggac ggaatccttc aactgcaaga
    17221 cccatcgcta aaccaccaat acctgattca gctaaaggtg tatcgaatac tctatcttca
    17281 ccaaattctt tttgtagtcc ttcagtaaca cggaaaacac cgccgttaac accaacgtct
    17341 tcaccaaaaa ttaaaacatc ttggtcattt ttaagttcag ttttaagcgc atcattaatc
    17401 gcttgaacca ttgtcatttg tgccatggct tacttcgact ccttctcttt gtaaatttca
    17461 tattgttctg ctaagttttg aggcatatct tcatacataa tttccattag agaagtaaca
    17521 gtttgttttt cagtgttatc agcctcttta attgctgctt taatatcagc ttttgcacgt
    17581 tcaataactt cattttcttt gtcttcattc cataaacctt tgttttcaag gaatttacgg
    17641 aaacgtacta atgggtcttt tttctcccat tcagcatctt cgtctgaagt tctgtaacga
    17701 gttggatcgt caccagccat tgtatgagga ccataacgat atgtcatagt ttcaattaat
    17761 gttggacctt cacctgcaac tgcgcggtca cgtgcttctt tagttgcttg atatacagct
    17821 aacgcatcca taccatcaac ttggatacca ggaataccta cagcaattgc tttttgagct
    17881 aatgtttcag cagcagtttg cttgcttctt ggtgttgaaa ttgcatagtt attgttttga
    17941 ataacgaaaa ttgcaggtgc tttataagct gctgcaaagt taataccttc gtagaaatca
    18001 ccttgtgaag aaccaccgtc accagtgtaa gtgattgcaa ctgcattttt accacgtttt
    18061 ttaagtgcaa atgcaacacc agcagcttga atgtattgtg caccgataat aatttgtggg
    18121 cttaatgcat taacgccttc agggaattga tttcctttga agtgacctct tgagaataag
    18181 aaagcttcag ttaatggtaa accatgccaa ataatttgag gaacatctct gtatcccggt
    18241 aaaatgtaat cttctttttc taaagcgtat tgtgacgcta attgtgatgc ttcttgacca
    18301 gcagttggtg catagaaacc taaacgtcct tgtctgttta atgagataga acgttgatca
    18361 aggatacgag tccataccat tctttccatt aattccacta attgttcatc cgtaagatca
    18421 ggtactaagt cttcatttac gacgttacca ttctcatcca aaatttgaac catttcaaat
    18481 ttcgattgag tatcatttaa aacttttact gcatcgaatt gggcttgtaa cttaggagcc
    18541 attcaattca ccataccttt cccataattg tatagaaatt cattttatcc ttactaattg
    18601 taccacaaat aaatgggact gttaaaccat ttgaaaaagt tctgttttaa taaaaaaaga
    18661 tacagataat aggaactgta ttagttgttt cctaccatct gtattatatt aattatttaa
    18721 attgatcaac gtcttgcttt tctttaccaa ccttatttag tacttttgta tacttatctg
    18781 atacttcttt taacttttta tagttctgtt ctattgcttt tgatttttcg ttaacacctt
    18841 gttgtgtcgc gtcattttga tttaaatatt taaataatgt tttctctgag tttacagcct
    18901 ttttatatgc tttcgcgtaa tcactgtgta acttatattt ttcttttaat acatcatcta
    18961 attgttttac ttctttacgt ttaacatcat tatcaatgtt atcaacgtga ctttttgctt
    19021 tcttaaagtc ttgttcagac ttcttaattg cgtcttcttc tttttcaaat tcctttagac
    19081 gatcatcggc atttttaatt aaatccttta ctgctttacc gcgaactgct gtatctttac
    19141 tattgacatc ttcagttaat tttttctttt tctcatctaa ttcagcaatt ttcttaccaa
    19201 cagttttaat tggttcttca tcatctttaa ttttatccac ttgctttaaa tatgccttaa
    19261 tttctttttt atccgtagta catcctgcaa gcaagacact agatgctaat actactgcga
    19321 ttgtttttcc aaatttcatt acttgtacct ccacttgcta tttaaattaa atgataaata
    19381 aaatctgctt ggaaatcaat tttaaacaat tacattacac atcttcatta ctaagtatat
    19441 ctgttgacag ttacgtcatt tataatataa tttttaaagt caagatgata aataaatttc
    19501 taaagtatca ttgcttgaaa ccaacacttt aatcattttt taagcaatta gcatatctga
    19561 aaatttacat atactatcta aaataaacat tggcagtagt tggttaactt tgtagatatt
    19621 tacacataaa aatgtatgag tatcttaaca acctttttac tgtcattcaa ctaaaacaaa
    19681 ttaaaataag gaaggtgcaa tatatgttaa caatgaaaga catcattaga gatggtcatc
    19741 caactttgcg tcaaaaagca gctgagttag aattaccatt aactaaagaa gaaaaagaaa
    19801 cattaatcgc catgagagag tttttagtaa atagtcaaga tgaggaaatc gcgaaacgat
    19861 atggtttacg ttcaggcgtt ggtttggctg cacctcaaat taatatttct aaacgtatga
    19921 ttgctgtttt aataccagat gatggcagtg gcaaatctta tgactatatg cttgtgaacc
    19981 caaaaattgt aagtcatagc gttcaagaag cttatttacc aactggtgaa ggttgcctta
    20041 gtgtcgatga taatgttgct ggtctagttc accgtcataa tagaattaca attaaagcca
    20101 aagacatcga aggtaatgat atacaattac gactaaaagg atatccagca attgttttcc
    20161 aacatgaaat tgaccattta aatggtgtaa tgttctatga tcacattgac aaagatcacc
    20221 cattacaacc acatacagat gcagtagaag tttaaaacac atttttctaa ttatcaaagc
    20281 ttaggataaa tatgatgtcc taagcttttc cttttacaac tttttcgaat aaacaacagt
    20341 taaatatatt cacctttcta ccaaactttt tatcccctca tttaaatttt accgtttcat
    20401 ataaaatcct ttaattcttt cttaacatta atttataatc tctacattta ttttaataaa
    20461 tagaactgca catttattcg aaatacttag atttctagtg agataaactg ctttatttat
    20521 tatcattcat catgtaaaat aagatttaac tgaaatttta gtgttatttc actaattttt
    20581 taaaatgaac gacatgatga acctagttat taaccaaatc gttattaagt tacattatag
    20641 agatgattgg aatgaattta tcgatatata ctccaatacg attttactag ggttaacaat
    20701 aaattaaaca aacattctta ggaggaattt ttaacatggc agtatttaaa gttttttatc
    20761 aacataacag agacgaggta attgtgcgtg aaaatacaca atcactttat gttgaagctc
    20821 aaacagaaga acaagtacgt cgttacttga aagatcgtaa ttttaatatc gaatttatca
    20881 ctaaattaga gggcgcacat ttagattacg aaaaagaaaa ctcagaacac tttaatgtgg
    20941 agattgctaa ataatgaaac aattacatcc aaatgaagta ggtgtatatg cacttggagg
    21001 tctaggtgaa atcggtaaaa atacttatgc agttgagtat aaagacgaaa ttgtcattat
    21061 cgatgcaggt atcaaattcc ctgatgataa cttattaggg attgattatg ttatacctga
    21121 ctacacatat ctagttcaaa accaagataa aattgttggc ctatttataa cacatggtca
    21181 cgaagaccat ataggcggtg tgcccttcct attaaaacaa cttaatatac ctatttatgg
    21241 tggtccttta gcattaggtt taatccgtaa taaacttgaa gaacatcatt tattacgtac
    21301 tgctaaacta aatgaaatca atgaggacag tgtgattaaa tctaagcact ttacgatttc
    21361 tttctactta actacacata gtattcctga aacttatggc gtcatcgtag atacacctga
    21421 aggaaaagta gttcataccg gtgactttaa atttgatttt acacctgtag gcaaaccagc
    21481 aaacattgct aaaatggctc aattaggcga agaaggcgtt ctatgtttac tttcagactc
    21541 aacaaattca cttgtgcctg attttacttt aagcgaacgt gaagttggtc aaaacgtaga
    21601 taagatcttc cgtaattgta aaggtcgtat tatatttgct accttcgctt ctaatattta
    21661 ccgagttcaa caagcagttg aagctgctat caaaaataac cgtaaaattg ttacgttcgg
    21721 tcgttcgatg gaaaacaata ttaaaatagg tatggaactt ggttatatta aagcaccacc
    21781 tgaaacattt attgaaccta ataaaattaa taccgtaccg aagcatgagt tattgatact
    21841 atgtactggt tcacaaggtg aaccaatggc agcattatct agaattgcta atggtactca
    21901 taagcaaatt aaaattatac ctgaagatac cgttgtattt agttcatcac ctatcccagg
    21961 taatacaaaa agtattaaca gaactattaa ttccttgtat aaagctggtg cagatgttat
    22021 ccatagcaag atttctaaca tccatacttc agggcatggt tctcaaggtg atcaacaatt
    22081 aatgcttcga ttaatcaagc cgaaatattt cttacctatt catggtgaat accgtatgtt
    22141 aaaagcacat ggtgagactg gtgttgaatg cggcgttgaa gaagataatg tcttcatctt
    22201 tgatattgga gatgtcttag ctttaacaca cgattcagca cgtaaagctg gtcgcattcc
    22261 atctggtaat gtacttgttg atggtagtgg tatcggtgat atcggtaatg ttgtaataag
    22321 agaccgtaag ctattatctg aagaaggttt agttatcgtt gttgttagta ttgattttaa
    22381 tacaaataaa ttactttctg gtccagacat tatttctcga ggatttgtat atatgaggga
    22441 atcaggtcaa ttaatttatg atgcacaacg caaaatcaaa actgatgtta ttagtaagtt
    22501 aaatcaaaat aaagatattc aatggcatca gattaaatct tctatcattg aaacattaca
    22561 accttattta tttgaaaaaa cagctagaaa accaatgatt ttaccagtca ttatgaaggt
    22621 aaacgaacaa aaagaatcaa acaataaata atcaaaaagc tactaacttt gaagtgaagt
    22681 tttaattaaa ctcaccaccc attgttagta gctttttctt tatatatgat gagcttgaga
    22741 cataaatcaa tgttcaatgc tctacaaagt tatattggca gtagttgact gaacgaaaat
    22801 gcgcttgtaa caagattttt tcaattctag tcaggggccc caacatagag aatttcgaaa
    22861 agaaattcta caggcaatgc gagttggggt gtgggcccca acaaagagaa attggattcc
    22921 caatttctac agacaatgta agttggggtg ggacgacgaa ataaattttg agaaaatatc
    22981 atttctgtcc cactcccgat tatctagtcg caatattttt ttcaaagcga tttaaatcat
    23041 tatcatgtcc aatcatgatt aaaatatcac ctatttctaa attaatattt ggatttggtg
    23101 aaatgatgaa ctctttgcct cgtttaattg caataatgtt aattccatat tgtgctctta
    23161 tatctaaatc aatgatagac tgccccgcca tcttttcagt tgctttcaat tctacaatag
    23221 aatgctcgtc tgccaactca agataatcaa gtacacttgc actcgcaaca ttatgcgcaa
    23281 tacgtctacc catatcacgc tcagggtgca caaccgtatc tgctccaatt ttatttaaaa
    23341 tctttgcatg ataatcattt tgtgctttag cagttacttt ttttacacct aactctttta
    23401 aaattaaagt cgtcaacgta cttgattgaa tattttcacc aattgccaca atgacatgat
    23461 caaagttacg gatacctaaa cttttcataa ctgcttcatc tgtagtgtct gcaacaaccg
    23521 catgagtagc gatatcacta tattcattca ctctattttc atcatggtcg atggccatta
    23581 catccatgtc taatgcattc aactcacgaa cgatactacc tccaaaacga cctagaccga
    23641 tgactacata ttctttaccc atactcgccc tccattaaat gattttcatc aattcattga
    23701 aaatataaat ttaaaattat tataaatgag taccccaact aaattatcta aatgcagtaa
    23761 tgcaagtaaa tgaaagttgg ggtatcgtct caacttatga tttctttcct tcaacatatt
    23821 ctttgtcgaa aacaaataat cttaataata atattaacga tggaagtaat aaaagtaaac
    23881 ctaaaataaa gacaatcact aatgtccagc ccatttctgg attaacatat gcatctgtaa
    23941 tttttacaaa cggatataaa aggtatggca atttactaat tccatagcca aagaacgcga
    24001 acatcatttg taaaataaca aatacaaaag ccaaaccatg ttttttctta aagaatgtta
    24061 acaatgaagc taatgcaaag aataagaaac ttataccaaa catccaccaa tagtcaaaaa
    24121 cagctgaata aaaatgttca gaattttgaa tgcgtaatga tagaaatacg aataaacaaa
    24181 tgataatcat cggcggccct aaaaatatgt gccattgtct tgttaaatta tatgctggtt
    24241 cgtcatttgc ttttttagca taatatgtca aaaatcctga tgaaatatat aaaactgaaa
    24301 taattgccaa gaatactaca gaccaagcaa atgggcttaa taataactgc acccaatcta
    24361 gatcgataac attgtttcga acattaatat agccaccttc tgtaatagtt aaagcagtag
    24421 ataatgaagc tggaattaat aatccactta ccccatacat gatcatccat gctaattttg
    24481 tatcttgacc ataattttca aatgcataaa aactgtttct caacgatatc ataatcagtg
    24541 ctattgaacc tggtattaac aataccgtgc ctaaatattt gattgactct ggaaagaaac
    24601 ctacgaatcc tacgaagaag aaaacaaaga atacattcgt aacttcccaa actgggttta
    24661 aataacgtga aattaagtga ttaattttct tttcatcacc agttaacttt gaatgcaatg
    24721 cgaagaaacc tgccccaaaa tctatagaag caataatgat atagcaaaat aaaaacaacc
    24781 ataacactgt tatacctata aatgcataaa tcatttttct atttctcctc cttgcttctt
    24841 ggctaaacga tttacatctt catacgccgg tttattttta aacatacgaa ttaatacgta
    24901 tgcacatgta tacattaaaa tgatgtacaa tatgccaaat aaaattgtaa cgaaggttat
    24961 tccgcctgct tgtgttgctg cttctgccac gcgcatataa ccacgaacaa tccaaggctg
    25021 tctacccatc tctgttaaga accatccaaa ttctatagct agcattgaag ctgggcctgt
    25081 taataatatt ccataaagca tccatttatg agtagaaaac tttctaagct ttttaaacat
    25141 taaagttaag acataaacac ctgaaatgac aaaacataaa attcccatcg ttaccattaa
    25201 atcaaagaaa taatggacga tcataggcgg atgtaaactt tttggaaaat catttaaccc
    25261 ttgtacttta gttttgacac tattatctgc taagaaactc aatagtccag gtaattcaat
    25321 cgcaccttta acttgctgag tcttttcatc taacacacca aataataata atttggcatg
    25381 ggaagatgta tcgaaatgcc attcataagc tgctaatttt tcaggttgga atttatgcaa
    25441 aaattttgca gataaatccc ctgccaacat agaaagtaat gttgaaaaga atccaactat
    25501 catagacatt ttcaaagctt tcttatggta gacagtatct ttaggttgac gattacgcaa
    25561 taatttaaaa gctgctattg atgcaataac aaatgccatc gtcataccgg ctgtagtaat
    25621 tacgtgaaat gatcgaacta taaacgatgg gttaaacatc gcttctatag gttgaacatt
    25681 gaccatcttt ccattcttca actcaaaacc tgcaggcgta ttcataaatg aattcactga
    25741 agtaatgaag aatgctgaga aagagccacc aataattact ggtatactaa ttaagaaatg
    25801 tgtccattta tttttaaaac gatcccaagt atataaatat atacttaaga aaatagcttc
    25861 aaagaagaac gcaaatgttt ccataaataa tggaagtgca ataacgtgtc cacccatttc
    25921 cataaatgta ggccaaatca atgataattg aagtcctata attgtacctg taacaactcc
    25981 cactgctaca gtaattgtat aagctttagc ccatcttttg gccatagcta tatattgaag
    26041 atcatttttg cgaataccta aaaattctgc aattgcgaac attaaaggca taccaacacc
    26101 aatcgttgca aaaatgatat gaactgctaa agtcatagct gtcaaaaacc gactgatttc
    26161 aactgtatcc atttaaaaac atcacctttt tctttttttg atgacaacac aatgaactta
    26221 attataattg ctataatgtg tatttttaaa acattatgcg ctatgaaatt gtgtataatt
    26281 tatgtcagtt cacaatgtgt tcacaaattt gaatttcaat gtataattgt gtatattaca
    26341 ttagaataaa gcacgaagga gcatgataca tgtcagaaat aatcgtttat acgcagaatg
    26401 attgtccacc ttgtacattt gtaaaaaatt atctaaatga gcatcacatt gattttgaag
    26461 agagaaatat caacaatcaa caatatcgaa acgaaatgat agattttgat gctttttcaa
    26521 ctccgtttat tttgttgaat ggcaatccaa tgtaccatgt tgatcttgat gaaatcaaca
    26581 aagtattaaa tatccaagat taattttcat ctaaatcaac ttcatcattt atagctatca
    26641 taaattaaat atcgattttt aaattaacta acattaatta aagaactaca ttttgttaat
    26701 gacacatagt tgtttaatta gttagcaaca acattccatt gaaattaaca taaatcataa
    26761 aaaagaaccc gaagtattca taattactta caatgaatac ttcgggttta tttataattc
    26821 tgtctttcga aagaattaat tattttacgt agttgttaac taattcaata acttcttctt
    26881 gcgttgcaca gtcgactgca cggttagcaa gttcagtcat ttcattttta cttaaaccat
    26941 taatttgtct tcttgctttc agaatagacg ttgcactcat agagaactca tctaaaccta
    27001 aaccaagcaa taatggaata gctgtttcat ctccagccat ttcaccacac atacctgtcc
    27061 atttaccttc tttatgtgac gcttcaataa cttgtttaac taaacgtaag attgaagggt
    27121 tatatggttg gtatagatat gatacacgct ctgacatacg gtcagcagct aatgtgtatt
    27181 gaattaaatc atttgtaccg atactgaaga aatctacttc tttagcaaag acatcagcta
    27241 atgctgctgt tgcaggtatc tctaccatga ttcctaattc tatatcatcc gaaatgtcat
    27301 gaccttcatt tttaaggttt tctttttctt ctaataatat agctttagct tctctaaatt
    27361 cgttaattgt tgcaaccatt gggaacatga tatttaactt accataaact gatgcacgta
    27421 ataatgcacg tagctgtggt ctgaaaatat cttgttgcgc aaggcataaa cgaatcgcac
    27481 ggtaacctaa gaatggattc atttcttcag gcaagtttaa gtatgataat tctttatctc
    27541 cacctatatc taaagtacgt acaacaacac gtttaccgcc cattgcttct aatacttctt
    27601 tataagcttc aaattgttct tcttctgtag gcatttggtc acgacccata tataaaaact
    27661 cagttctata taagccgata ccttgtgcac cattttcaat aacacctggc aaatcattag
    27721 gtgtaccaat atttgcagca agctctgcgt gaacaccatc aactgtaaca gtatcagcat
    27781 cacgtagttt ttgtaattct ttcttgtcag caaaataacg ctcacgttta tcttgataag
    27841 cgattaactc atcttcagtt ggattaacga ttacatcacc atttaatcca tctacgataa
    27901 tcatgtcgcc ttgtttaact tcttgagtaa ttgattttgt accaacaatt gctggaattt
    27961 ctaaagaacg actcataatt gcagagtgac ttgttcttcc gccaatgttt gtagcaaaac
    28021 cttgtacgaa ttctttattt aattgagcag tatcagatgg cgttaagtca ttccctacaa
    28081 taacaacgct ttcatcaatc atactcggat tcggtaattc tacacctaaa atatgtgata
    28141 acacacgttt agaaacgtcg cgaatatcag ccgcacgttc tttcatgtat tcgttatcca
    28201 tagattcaaa aattgtaaca aattgtgttg ttacatccgt taatgctgta gcagcattag
    28261 cgttttcatt tttaatctta tcttggattg gttgaattaa ttcagggtca tctaaaacta
    28321 ataaatgtgc atcaaagata gcagctttat cagcacctag ttgaacctct gcattatttc
    28381 taattttagt taactcaact ttagaagctt cgatagcgct attgaacttt gcaacttctc
    28441 cttcaacatc agtgactttt tcatttttgt cgaatgttaa gtctggctca actaataaat
    28501 aagctttagc aattgcgaca ccatcagatg cggcaatacc tttaattaat ttagacatga
    28561 ttatttagtc aatccttctt ttgataagac gtcactgatt gcttgaatgg cgtcagattc
    28621 atcactaccg tcagcataaa ttgtaatttc agcatcttta ccaacaccaa ggctcataac
    28681 acccatgatt gattttaagt ttactttctt accgttatat tctaattgaa tatcagaatc
    28741 gaattttgaa gctgtttgta ctaacattgt tgctggtcta gcgtgaatac cagtctcgtc
    28801 gatgattaca tatgaatttt gttccataat tacatttctc cttcgtatag ttagaatctt
    28861 caatattatt acaatactaa cttagtttta tacattaact ttaccaaaac catgctttaa
    28921 attcaattcg tttaaaaccg gtttcagtaa aatttgcaaa ttgcaaaact attatagcac
    28981 ctacatgaca tttttaataa cattttcgca tttttgaatg tgatcttttc caattttatt
    29041 cataaaatag taactaatag atgcagacac agcttgtcct acaacaggaa accattttgt
    29101 ttgttttgca gcagtacgtt tagctacatc tctaattaca atttttaaaa atgcatttga
    29161 aattctttta ccaataaatt gactaccttg aattgctgct gcagacataa ttctttcttt
    29221 cacatcatcc ccaaggctat taacttgctt atgatctaaa ccataaattt tattaacatc
    29281 ttcgataata tctttcatta attttaaatc aacaccaaaa tctaaacccg gaattggaac
    29341 aacgctcatt gttgatgaca ttaaagactt tctctttaca attgcttcag cacgttgtcg
    29401 tctttctctc aattcttgaa tcgtcgttgg cattgcacct tttccgtcaa cattttctat
    29461 tttaaagact gaattaccga ttttatttgt taaatttgat gttaaattgt ttttgaatcc
    29521 cataatatta tcacccttct ttttctcaat aagttactat accccttttt atcaaattaa
    29581 tgtctaatat ttacaaaaac agcttttaaa tatttagatg gcttataatg tggatgcgtt
    29641 ttaaaatctt ttggtaatcc cataacttca gttaattcat aatcaacgcc actctcttca
    29701 agcgtctttt taatagtatt tttaaattgc tttaatggat atacacttgc gtttgtacat
    29761 aacaataatg ttccttcaga tgataagata tttaaggcgc cattaattaa tttgtcataa
    29821 tctttttgca ctgaaaatgt acgttttttg ttacgcgcaa agctaggtgg atcaatcacg
    29881 atcgtgtcat aactatgtcc atgtcgtgca gcatatttat agaaatcaaa agtgtccatg
    29941 acataaatat attgggattt aggatcaata gcatttaatc caaaattttc ttcagttaaa
    30001 ctacgagaac gattagccaa atctacactt gttgttgaag atgcctcact tgctgctatt
    30061 gcagaaaaag cacctgtata actaaataag tttaaaacat ggcgttcttt ggcatattga
    30121 tcccttaatt tcttgcgcac ttctttttga tctaaaaaga tacctgtcat caaaccatct
    30181 tcaaggtcta cattataaaa tgtgaagttt tcttcgataa caattggaaa ctcaggtgca
    30241 tctccttcaa caaaaccacc actatattcg ctgtctttaa atcttacttt ttcgtaaata
    30301 gatttataat caaatacttt tctaaccgct tcaagaatgg catatttaaa tttataaata
    30361 ccttttgagt accattgaat caacaaatga ccatcgtaat tgtcgattgt taatccccca
    30421 acaccatcac cttcagcatt aaataatcta aaagcatttg ttccatctat attaaaataa
    30481 taatcacgtt ctgctaatgc agtattaaac aattttacaa agaaagctgt gttgatttgt
    30541 tgagctttat cgtatgttag aacccaacct aatcctttat gttggcgacc aacataagcc
    30601 gttgcgacat attgtgattt atcagtcaca atttgaaaaa tatctccttc ttttaaatga
    30661 tcttgtgaat agatatcctc ttcttcaatt aaaggatatc cattaaaata ttttgtttct
    30721 ttgcctttgt tcagagttgc tattttcatc tgacaacttc ctttctgtgt ttcgttgtag
    30781 ttttatatag attaaattgt ttgccaaatt tcaatatcat ctacttctaa tcttactgtt
    30841 gattttaaca aattagtaat tcgaatgata tatgttaaat ttctacaaag gaaatactat
    30901 atatcgtttc gcaaattcca taagtcgctt caactattta ctagttttct tgattttaca
    30961 aatggataac ttttcaacta ttttatttgc actaaaactt tgt
//
LOCUS       DALPQQ010000019        30803 bp    DNA     linear   BCT 22-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus strain K18-6-464
            SAMD00233528-rid16434743.denovo.019, whole genome shotgun sequence.
ACCESSION   DALPQQ010000019 DALPQQ010000000
VERSION     DALPQQ010000019.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMD00233528
            Sequence Read Archive: DRR236061
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 30803)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 30803)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001543423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001543423.1
            Genome Coverage       :: 77x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/22/2022 17:09:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,811
            CDSs (total)                      :: 2,743
            Genes (coding)                    :: 2,689
            CDSs (with protein)               :: 2,689
            Genes (RNA)                       :: 68
            rRNAs                             :: 2, 4, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 4, 2 (16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 54
            CDSs (without protein)            :: 54
            Pseudo Genes (ambiguous residues) :: 0 of 54
            Pseudo Genes (frameshifted)       :: 27 of 54
            Pseudo Genes (incomplete)         :: 27 of 54
            Pseudo Genes (internal stop)      :: 10 of 54
            Pseudo Genes (multiple problems)  :: 10 of 54
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..30803
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMD00233528-rid16434743.denovo.019"
                     /strain="K18-6-464"
                     /db_xref="taxon:1280"
                     /geo_loc_name="Japan: Niigata"
     gene            complement(274..1239)
                     /locus_tag="O7798_000757"
     CDS             complement(274..1239)
                     /locus_tag="O7798_000757"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499107.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent epimerase/dehydratase family
                     protein"
                     /protein_id="HDC2863028.1"
                     /translation="MKKIMITGALGQIGTELVVKCREIYGTDNVLATDIREPEADSPV
                     QNGPFEILDVTDRDRMFELVRDFEADSLMHMAALLSATAEKNPILAWDLNMGGLMNAL
                     EAARTYNLHFFTPSSIGAFGDSTPKVNTPQVTIQQPTTMYGVNKVAGELLCQYYFKRF
                     GVDTRSVRFPGLISHVKEPGGGTTDYAVEIYFKAVREGHYTSFIDKGTYMDMMYMDDA
                     IEAIIKLMEADDAKLETRNGYNLSAMSFDPEMVKEAIQEYYPNFTLDYDVDPIRQGIA
                     NSWPDSIDTSCSRGEWGFDPKYDLASMTKLMLEAIEQKDTVKNNN"
     gene            complement(1453..3090)
                     /locus_tag="O7798_000758"
     CDS             complement(1453..3090)
                     /locus_tag="O7798_000758"
                     /EC_number="2.7.1.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499106.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribulokinase"
                     /protein_id="HDC2863029.1"
                     /translation="MSYSIGIDYGTASGRVFLINTTNGQVVSKFVKPYTHGVIESELN
                     GLKIPHTYALQNSNDYLEIMEEGISYIVRESKIDPDNIVGIGIDFTSSTIIFTDENLN
                     PVHNLKQFKNNPHAYVKLWKHHGAYKEAEKLYQTAIENNNKWLGHYGYNVSSEWMIPK
                     IMEVMNRAPEIMEKTAYIMEAGDWIVNKLTNKNVRSNCGLGFKAFWEEETGFHYDLFD
                     KIDPKLSKVIQDKVSAPVVNIGEAVGKLDDKMAQKLGLSKETMVSPFIIDAHASLLGI
                     GSEKDKEMTMVMGTSTCHLMLNEKQHQVPGISGSVKGAIIPELFAYEAGQSAVGDLFE
                     YVAKQAPKSYVDEAENRNMTVFELMNEKIKHQMPGESGLIALDWHNGNRSVLSDSNLT
                     GCIFGLTLQTKHEDIYRAYLEATAFGTKMIMQQYQDWHMEVEKVFACGGIPKKNAVMM
                     DIYANVLNKKLIVMDSEYAPAIGAAILGAVSGGAHNSINDAVDAMKEPILYEINPEAE
                     KVQRYETLFKAYKALHDIHGYKKANIMKDIQSLRVEG"
     gene            complement(3250..4128)
                     /gene="hchA"
                     /locus_tag="O7798_000759"
     CDS             complement(3250..4128)
                     /gene="hchA"
                     /locus_tag="O7798_000759"
                     /EC_number="3.5.1.124"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499105.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein deglycase HchA"
                     /protein_id="HDC2863030.1"
                     /translation="MSQDVNELSKQPTPDKAEDNAFFPSPYSLSQYTAPKTDFDGVEH
                     KGAYKDGKWKVLMIAAEERYVLLENGKMFSTGNHPVEMLLPLHHLMEAGFDVDVATLS
                     GYPVKLELWAMPTEDEAVISTYNKLKEKLKQPKKLADVIKNELGPDSDYLSVFIPGGH
                     AAVVGISESEDVQQTLDWALDNDRFIVTLCHGPAALLSAGLNREKSPLEGYSVCVFPD
                     SLDEGANIEIGYLPGRLKWLVADLLTKQGLKVVNDDMTGRTLKDRKLLTGDSPLASNE
                     LGKLAVNEMLNAIQNK"
     gene            complement(4394..5581)
                     /locus_tag="O7798_000760"
     CDS             complement(4394..5581)
                     /locus_tag="O7798_000760"
                     /EC_number="2.3.1.29"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499104.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycine C-acetyltransferase"
                     /protein_id="HDC2863031.1"
                     /translation="MVQSLHEFLEENINYLKENGLYNEIDTIEGANGPEIKINGKSYI
                     NLSSNNYLGLATNEDLKSAAKAAIDTHGVGAGAVRTINGTLDLHDELEETLAKFKGTE
                     AAIAYQSGFNCNMAAISAVMNKNDAILSDELNHASIIDGCRLSKAKIIRVNHSDMDDL
                     RAKAKEAVESGQYNKVMYITDGVFSMDGDVAKLPEIVEIAEEFGLLTYVDDAHGSGVM
                     GKGAGTVKHFGLQDKIDFQIGTLSKAIGVVGGYVAGTKELIDWLKAQSRPFLFSTSLA
                     PGDTKAITEAVKKLMDSTELHDKLWNNAQYLKNGLSKLGYDTGESETPITPVIIGDEK
                     TTQEFSKRLKDEGVYVKSIVFPTVPRGTGRVRNMPTAAHTKDMLDEAIAAYEKVGKEM
                     KLI"
     gene            5752..6927
                     /locus_tag="O7798_000761"
     CDS             5752..6927
                     /locus_tag="O7798_000761"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499103.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase"
                     /protein_id="HDC2863032.1"
                     /translation="MLDWFQLANNKENKTIQLRRYLHQYPELSFEEFQTHDYIVNQLS
                     QLSCDIETPIGRNGIKATFKGLGTGPTIALRADFDALPVEELNDVPYKSKNPGCMHAC
                     GHDGHTAILLTVAEILDEHKHLLEGNVVLIFQYGEEIMPGGSQEMIDAGCLENVDRIY
                     GTHLWSGYPTGTIHSRAGAIMASPDEFSVTFKGRGGHGAKPHETIDPIVIMAEFILSA
                     QKIISRTIDPVKQAVLSFGMIQAGTTDSVIPDQAFCKGTVRTFDSDIQNHVMDKMDKL
                     LQGLAIANDINYDLNYIKGYLPVHNNEKAYQVIKEATNDLHVRFNESDLMMIGEDFSH
                     YLKVRPGAFFLTGCGNESKGITAPHHNPKFDIDEKSLKYAVAVFLKIIELEQVFKTN"
     gene            complement(7209..8393)
                     /gene="tuf"
                     /locus_tag="O7798_000762"
     CDS             complement(7209..8393)
                     /gene="tuf"
                     /locus_tag="O7798_000762"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499102.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor Tu"
                     /protein_id="HDC2863033.1"
                     /translation="MAKEKFDRSKEHANIGTIGHVDHGKTTLTAAIATVLAKNGDSVA
                     QSYDMIDNAPEEKERGITINTSHIEYQTDKRHYAHVDCPGHADYVKNMITGAAQMDGG
                     ILVVSAADGPMPQTREHILLSRNVGVPALVVFLNKVDMVDDEELLELVEMEVRDLLSE
                     YDFPGDDVPVIAGSALKALEGDAQYEEKILELMEAVDTYIPTPERDSDKPFMMPVEDV
                     FSITGRGTVATGRVERGQIKVGEEVEIIGLHDTSKTTVTGVEMFRKLLDYAEAGDNIG
                     ALLRGVAREDVQRGQVLAAPGSITPHTEFKAEVYVLSKDEGGRHTPFFSNYRPQFYFR
                     TTDVTGVVHLPEGTEMVMPGDNVEMTVELIAPIAIEDGTRFSIREGGRTVGSGVVTEI
                     IK"
     gene            complement(8610..10691)
                     /gene="fusA"
                     /locus_tag="O7798_000763"
     CDS             complement(8610..10691)
                     /gene="fusA"
                     /locus_tag="O7798_000763"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017804675.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor G"
                     /protein_id="HDC2863034.1"
                     /translation="MAREFSLEKTRNIGIMAHIDAGKTTTTERILYYTGRIHKIGETH
                     EGASQMDWMEQEQDRGITITSAATTAAWEGHRVNIIDTPGHVDFTVEVERSLRVLDGA
                     VTVLDAQSGVEPQTETVWRQATTYGVPRIVFVNKMDKLGANFEYSVSTLHDRLQANAA
                     PIQLPIGAEDEFEAIIDLVEMKCFKYTNDLGTEIEEIEIPEDHLDRAEEARASLIEAV
                     AETSDELMEKYLGDEEISVSELKEAIRQATTNVEFYPVLCGTAFKNKGVQLMLDAVID
                     YLPSPLDVKPIIGHRASNPEEEVIAKADDSAEFAALAFKVMTDPYVGKLTFFRVYSGT
                     MTSGSYVKNSTKGKRERVGRLLQMHANSRQEIDTVYSGDIAAAVGLKDTGTGDTLCGE
                     KNDIILESMEFPEPVIHLSVEPKSKADQDKMTQALVKLQEEDPTFHAHTDEETGQVII
                     GGMGELHLDILVDRMKKEFNVECNVGAPMVSYRETFKSSAQVQGKFSRQSGGRGQYGD
                     VHIEFTPNETGAGFEFENAIVGGVVPREYIPSVEAGLKDAMENGVLAGYPLIDVKAKL
                     YDGSYHDVDSSEMAFKIAASLALKEAAKKCDPVILEPMMKVTIEMPEEYMGDIMGDVT
                     SRRGRVDGMEPRGNAQVVNAYVPLSEMFGYATSLRSNTQGRGTYTMYFDHYAEVPKSI
                     AEDIIKKNKGE"
     gene            complement(10814..11284)
                     /gene="rpsG"
                     /locus_tag="O7798_000764"
     CDS             complement(10814..11284)
                     /gene="rpsG"
                     /locus_tag="O7798_000764"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013054923.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S7"
                     /protein_id="HDC2863035.1"
                     /translation="MPRKGSVPKRDVLPDPIHNSKLVTKLINKIMLDGKRGTAQRILY
                     SAFDLVEQRSGRDALEVFEEAINNIMPVLEVKARRVGGSNYQVPVEVRPERRTTLGLR
                     WLVNYARLRGEKTMEDRLANEILDAANNTGGAVKKREDTHKMAEANKAFAHYRW"
     gene            complement(11350..11763)
                     /gene="rpsL"
                     /locus_tag="O7798_000765"
     CDS             complement(11350..11763)
                     /gene="rpsL"
                     /locus_tag="O7798_000765"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001142337.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S12"
                     /protein_id="HDC2863036.1"
                     /translation="MPTINQLVRKPRQSKIKKSDSPALNKGFNSKKKKFTDLNSPQKR
                     GVCTRVGTMTPKKPNSALRKYARVRLSNNIEINAYIPGIGHNLQEHSVVLVRGGRVKD
                     LPGVRYHIVRGALDTSGVDGRRQGRSLYGTKKPKN"
     gene            complement(11861..12115)
                     /locus_tag="O7798_000766"
     CDS             complement(11861..12115)
                     /locus_tag="O7798_000766"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499098.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosomal L7Ae/L30e/S12e/Gadd45 family protein"
                     /protein_id="HDC2863037.1"
                     /translation="MSKEKVARFNKQHFVVGLKETLKALKKDQVTSLIIAEDVEVYLM
                     TRVLSQINQKNIPVSFFKSKHALGKHVGINVNATIVALIK"
     gene            complement(12252..15848)
                     /gene="rpoC"
                     /locus_tag="O7798_000767"
     CDS             complement(12252..15848)
                     /gene="rpoC"
                     /locus_tag="O7798_000767"
                     /EC_number="2.7.7.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499097.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-directed RNA polymerase subunit beta'"
                     /protein_id="HDC2863038.1"
                     /translation="MKIGLASPEKIRSWSFGEVKKPETINYRTLKPEKDGLFCERIFG
                     PTKDWECSCGKYKRVRYKGMVCDRCGVEVTKSKVRRERMGHIELAAPVSHIWYFKGIP
                     SRMGLLLDMSPRALEEVIYFASYVVVDPGPTGLEKKTLLSEAEFRDYYDKYPGQFVAK
                     MGAEGIKDLLEEIDLDEELKLLRDELESATGQRLTRAIKRLEVVESFRNSGNKPSWMI
                     LDVLPIIPPEIRPMVQLDGGRFATSDLNDLYRRVINRNNRLKRLLDLGAPGIIVQNEK
                     RMLQEAVDALIDNGRRGRPVTGPGNRPLKSLSHMLKGKQGRFRQNLLGKRVDYSGRSV
                     IAVGPSLKMYQCGLPKEMALELFKPFVMKELVQREIATNIKNAKSKIERMDDEVWDVL
                     EEVIREHPVLLNRAPTLHRLGIQAFEPTLVEGRAIRLHPLVTTAYNADFDGDQMAVHV
                     PLSKEAQAEARMLMLAAQNILNPKDGKPVVTPSQDMVLGNYYLTLERKDAVNTGAIFN
                     NTNEVLKAYANGFVHLHTRIGVHASSFNNPTFTEEQNKKILATSVGKIIFNEIIPDSF
                     AYINEPTQENLERKTPNRYFIDPTTLGEGGLKEYFENEELIEPFNKKFLGNIIAEVFN
                     RFSITDTSMMLDRMKDLGFKFSSKAGITVGVADIVVLPDKQQILDEHEKLVDRITKQF
                     NRGLITEEERYNAVVEIWTDAKDQIQGELMQSLDKTNPIFMMSDSGARGNASNFTQLA
                     GMRGLMAAPSGKIIELPITSSFREGLTVLEYFISTHGARKGLADTALKTADSGYLTRR
                     LVDVAQDVIVREEDCGTDRGLLVSDIKEGTEMIEPFIERIEGRYSKETIRHPETDEII
                     IRPDELITPEIAKKITDAGIEQMYIRSAFTCNARHGVCEKCYGKNLATGEKVEVGEAV
                     GTIAAQSIGEPGTQLTMRTFHTGGVAGSDITQGLPRIQEIFEARNPKGQAVITEIEGV
                     VEDIKLAKDRQQEIVVKGANETRSYLASGTSRIIVEIGQPVQRGEVLTEGSIEPKNYL
                     SVAGLNATESYLLKEVQKVYRMQGVEIDDKHVEVMVRQMLRKVRIIEAGDTKLLPGSL
                     VDIHNFTDANREAFKHRKRPATAKPVLLGITKASLETESFLSAASFQETTRVLTDAAI
                     KGKRDDLLGLKENVIIGKLIPAGTGMRRYSDVKYEKTAKPVAEVESQTEVTE"
     gene            complement(16012..19563)
                     /gene="rpoB"
                     /locus_tag="O7798_000768"
     CDS             complement(16012..19563)
                     /gene="rpoB"
                     /locus_tag="O7798_000768"
                     /EC_number="2.7.7.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499096.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-directed RNA polymerase subunit beta"
                     /protein_id="HDC2863039.1"
                     /translation="MAGQVVQYGRHRKRRNYARISEVLELPNLIEIQTKSYEWFLREG
                     LIEMFRDISPIEDFTGNLSLEFVDYRLGEPKYDLEESKNRDATYAAPLRVKVRLIIKE
                     TGEVKEQEVFMGDFPLMTDTGTFVINGAERVIVSQLVRSPSVYFNEKIDKNGRENYDA
                     TIIPNRGAWLEYETDAKDVVYVRIDRTRKLPLTVLLRALGFSSDQEIVDLLGDNEYLR
                     NTLEKDGTENTEQALLEIYERLRPGEPPTVENAKSLLYSRFFDPKRYDLASVGRYKTN
                     KKLHLKHRLFNQKLAEPIVNTETGEIVVEEGTVLDRRKIDEIMDVLESNANSEVFELH
                     GSVIDEPVEIQSIKVYVPNDDEGRTTTVIGNAFPDSEVKCITPADIIASMSYFFNLLS
                     GIGYTDDIDHLGNRRLRSVGELLQNQFRIGLSRMERVVRERMSIQDTESITPQQLINI
                     RPVIASIKEFFGSSQLSQFMDQANPLAELTHKRRLSALGPGGLTRERAQMEVRDVHYS
                     HYGRMCPIETPEGPNIGLINSLSSYARVNEFGFIETPYRKVDLDTHAITDQIDYLTAD
                     EEDSYVVAQANSKLDENGRFMDDEVVCRFRGNNTVMAKEKMDYMDVSPKQVVSAATAC
                     IPFLENDDSNRALMGANMQRQAVPLMNPEAPFVGTGMEHVAARDSGAAITAKHRGRVE
                     HVESNEILVRRLVEENGVEHEGELDRYPLAKFKRSNSGTCYNQRPIVAVGDVVEYNEI
                     LADGPSMELGEMALGRNVVVGFMTWDGYNYEDAVIMSERLVKDDVYTSIHIEEYESEA
                     RDTKLGPEEITRDIPNVSESALKNLDDRGIVYIGAEVKDGDILVGKVTPKGVTELTAE
                     ERLLHAIFGEKAREVRDTSLRVPHGAGGIVLDVKVFNREEGDDTLSPGVNQLVRVYIV
                     QKRKIHVGDKMCGRHGNKGVISKIVPEEDMPYLPDGRPIDIMLNPLGVPSRMNIGQVL
                     ELHLGMAAKNLGIHVASPVFDGANDDDVWSTIEEAGMARDGKTVLYDGRTGEPFDNRI
                     SVGVMYMLKLAHMVDDKLHARSTGPYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGA
                     AYTLQEILTYKSDDTVGRVKTYEAIVKGENISRPSVPESFRVLMKELQSLGLDVKVMD
                     EQDNEIEMTDVDDDDVVERKVDLQQNDAPETQKEVTD"
     gene            complement(19778..20386)
                     /locus_tag="O7798_000769"
     CDS             complement(19778..20386)
                     /locus_tag="O7798_000769"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499095.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HDC2863040.1"
                     /translation="MSHYYDEDPSVISNEQRIQYQLNHHKIDLITDNGVFSKDKVDYG
                     SDVLVQTFLKAHPPGPSKRIADVGCGYGPIGLMIAKVSPHHSITMLDVNHRALALVEK
                     NKKLNGIDNVIVKESDALSAVEDKSFDFILTNPPIRAGKETVHRIFEQALHRLDSNGE
                     LFVVIQKKQGMPSAKKRMNELFGNVEVVNKDKGYYILRSIKA"
     gene            complement(20561..20929)
                     /gene="rplL"
                     /locus_tag="O7798_000770"
     CDS             complement(20561..20929)
                     /gene="rplL"
                     /locus_tag="O7798_000770"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001273587.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L7/L12"
                     /protein_id="HDC2863041.1"
                     /translation="MANHEQIIEAIKEMSVLELNDLVKAIEEEFGVTAAAPVAVAGAA
                     GGADAAAEKTEFDVELTSAGSSKIKVVKAVKEATGLGLKDAKELVDGAPKVIKEALPK
                     EEAEKLKEQLEEVGATVELK"
     gene            complement(20972..21472)
                     /locus_tag="O7798_000771"
     CDS             complement(20972..21472)
                     /locus_tag="O7798_000771"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499093.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L10"
                     /protein_id="HDC2863042.1"
                     /translation="MSAIIEAKKQLVDEIAEVLSNSVSTVIVDYRGLTVAEVTDLRSQ
                     LREAGVEYKVYKNTMVRRAAEKAGIEGLDEFLTGPTAIATSSEDAVAAAKVISGFAKD
                     HEALEIKSGVMEGNVITAEEVKTVGSLPSHDGLVSMLLSVLQAPVRNFAYAVKAIGEQ
                     KEENAE"
     misc_feature    complement(21510..21656)
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00557"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="ribosomal protein L10 leader region; Derived by
                     automated computational analysis using gene prediction
                     method: cmsearch."
                     /db_xref="RFAM:RF00557"
     gene            complement(21744..22436)
                     /gene="rplA"
                     /locus_tag="O7798_000772"
     CDS             complement(21744..22436)
                     /gene="rplA"
                     /locus_tag="O7798_000772"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499092.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L1"
                     /protein_id="HDC2863043.1"
                     /translation="MAKKGKKYQEAASKVDRTQHYSVEEAIKLAKETSIANFDASVEV
                     AFRLGIDTRKNDQQIRGAVVLPNGTGKSQSVLVFAKGDKIAEAEAAGADYVGEAEYVQ
                     KIQQGWFDFDVVVATPDMMGEVGKLGRVLGPKGLMPNPKTGTVTMDVKKAVEEIKAGK
                     VEYRAEKAGIVHASIGKVSFTDEQLIENFNTLQDVLAKAKPSSAKGTYFKSVAVTTTM
                     GPGVKIDTASFK"
     gene            complement(22644..23066)
                     /gene="rplK"
                     /locus_tag="O7798_000773"
     CDS             complement(22644..23066)
                     /gene="rplK"
                     /locus_tag="O7798_000773"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012664221.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L11"
                     /protein_id="HDC2863044.1"
                     /translation="MAKKVDKVVKLQIPAGKANPAPPVGPALGQAGVNIMGFCKEFNA
                     RTQDQAGLIIPVEISVYEDRSFTFITKTPPAPVLLKKAAGIEKGSGEPNKTKVATVTK
                     DQVREIANSKMQDLNAADEEAAMRIIEGTARSMGIVVE"
     gene            complement(23247..23795)
                     /gene="nusG"
                     /locus_tag="O7798_000774"
     CDS             complement(23247..23795)
                     /gene="nusG"
                     /locus_tag="O7798_000774"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001832303.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcription termination/antitermination
                     protein NusG"
                     /protein_id="HDC2863045.1"
                     /translation="MSEEVGAKRWYAVHTYSGYENKVKKNLEKRVESMNMTEQIFRVV
                     IPEEEETQVKDGKAKTTVKKTFPGYVLVELIMTDESWYVVRNTPGVTGFVGSAGAGSK
                     PNPLLPEEVRFILKQMGLKEKTIDVELEVGEQVRIKSGPFANQVGEVQEIETDKFKLT
                     VLVDMFGRETPVEVEFDQIEKL"
     gene            complement(23808..23990)
                     /gene="secE"
                     /locus_tag="O7798_000775"
     CDS             complement(23808..23990)
                     /gene="secE"
                     /locus_tag="O7798_000775"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499089.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="preprotein translocase subunit SecE"
                     /protein_id="HDC2863046.1"
                     /translation="MAKKESFFKGVKSEMEKTSWPTKEELFKYTVIVVSTVIFFLVFF
                     YALDLGITALKNLLFG"
     gene            complement(24046..24189)
                     /gene="rpmG"
                     /locus_tag="O7798_000776"
     CDS             complement(24046..24189)
                     /gene="rpmG"
                     /locus_tag="O7798_000776"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002451211.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L33"
                     /protein_id="HDC2863047.1"
                     /translation="MRKIPLNCEACGNRNYNVPKQEGSATRLTLKKYCPKCNAHTIHK
                     ESK"
     gene            complement(24304..24873)
                     /locus_tag="O7798_000777"
     CDS             complement(24304..24873)
                     /locus_tag="O7798_000777"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499088.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase sigma factor"
                     /protein_id="HDC2863048.1"
                     /translation="MKYDLTTQDSTIKRNNAINDKDFEKLVMDLQPLIIRRIKTFGFN
                     HYDLEDLYQEILIRMYRSVQTFDFSGEQPFTNYVQCLITSVKYDYLRKYLATNKRMDN
                     LINEYRVTYPCAIKRFDVENNYLNKLAIKELICQFKYLSAFEKDVMYLMCEQYKPREI
                     AQLMHVKEKVIYNAIQRCKNKIKRYFKMI"
     gene            complement(24954..25478)
                     /locus_tag="O7798_000778"
     CDS             complement(24954..25478)
                     /locus_tag="O7798_000778"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499087.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NYN domain-containing protein"
                     /protein_id="HDC2863049.1"
                     /translation="MKERYLIIDGYNMIGQSPTLSAIAKENLEEARMQLIDAIANYNA
                     VISDEIICVFDAYDQSGVEREYMYHGVKTIFTKEKETADSFIERYVYELYDKHTKHIT
                     VVTSDMSEQHAIFGSGAYRISSREMWRDLKENEIDVSKSLDDISENKPRTRIPLSSEI
                     LAEFEKIRRGHHKK"
     gene            complement(25478..26224)
                     /gene="rlmB"
                     /locus_tag="O7798_000779"
     CDS             complement(25478..26224)
                     /gene="rlmB"
                     /locus_tag="O7798_000779"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499086.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA
                     (guanosine(2251)-2'-O)-methyltransferase RlmB"
                     /protein_id="HDC2863050.1"
                     /translation="MEDTVIVGRHAVREAIITGHPINKILIQEGIKKQQINEILKNAK
                     DQKIIVQTVPKSKLDFLANAPHQGVAALIAPYEYADFDQFLKQQKEKEGLLTVLILDG
                     LEDPHNLGSILRTADATGVDGVIIPKRRSVTLTQTVAKASTGAIEHVPVIRVTNLAKT
                     IDELKDNGFWVAGTEANNATDYRNLEADMSLAIVIGSEGQGMSRLVSDKCDFYIKIPM
                     VGHVNSLNASVAASLMMYEVFRKRHDVGEI"
     gene            complement(26232..26636)
                     /locus_tag="O7798_000780"
     CDS             complement(26232..26636)
                     /locus_tag="O7798_000780"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499085.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Mini-ribonuclease 3"
                     /protein_id="HDC2863051.1"
                     /translation="MDNQQDNHIKLLNPLTLAYMGDAVLDQYVRTYIVLKLKSKPNKL
                     HQMSKKYVSAKSQAQTLEYLMEQEWFTDEEMDILKRGRNAKSHTKAKNTDVQTYRKSS
                     AIEAVIGFLYLEKREERLEALLNKIITIVNER"
     gene            complement(26629..28029)
                     /locus_tag="O7798_000781"
     CDS             complement(26629..28029)
                     /locus_tag="O7798_000781"
                     /EC_number="6.1.1.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000631968.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine--tRNA ligase"
                     /protein_id="HDC2863052.1"
                     /translation="MITLYNTLTRQKEVFKPIEPGKVKMYVCGPTVYNYIHIGNARPA
                     INYDVVRRYFEYQGYNVEYVSNFTDVDDKLIKRSQELNQSVPEIAEKYIAAFHEDVGA
                     LNVRKATSNPRVMDHMDDIIQFIKDLVDQGYAYESGGDVYFRTRKFEGYGKLSHQSID
                     DLKVGARIDAGEHKEDALDFTLWKKAKPGEISWDSPFGEGRPGWHIECSVMAFHELGP
                     TIDIHAGGSDLQFPHHENEIAQSEAHNHAPFANYWMHNGFINIDNEKMSKSLGNFILV
                     HDIIKEVDPDVLRFFMISVHYRSPINYNLELVESARSGLERIRNSYQLIEERAQIATN
                     IENQQTYIDQIDAILNRFETVMNDDFNTANAITAWYDLAKLANKYVLENTTSTEVIDK
                     FKAVYQIFSDVLGVPLKSKNADELLDEDVEKLIEERNEARKNKDFARADEIRDMLKSQ
                     NIILEDTPQGVRFKRG"
     gene            complement(28013..28660)
                     /gene="cysE"
                     /locus_tag="O7798_000782"
     CDS             complement(28013..28660)
                     /gene="cysE"
                     /locus_tag="O7798_000782"
                     /EC_number="2.3.1.30"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499083.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine O-acetyltransferase"
                     /protein_id="HDC2863053.1"
                     /translation="MILLKRMRDDIKMVFEQDPAARSTLEVITTYAGLHAVWSHLIAH
                     KLYNQKKYVAARAISQISRFFTGIEIHPGAKIGKRLFIDHGMGVVIGETCTIGDNVTI
                     YQGVTLGGTGKERGKRHPDIGDNVLIAAGAKVLGNIKINSNVNIGANSVVLQSVPSYS
                     TVVGIPGHIVKQDGVRVGKTFDHRHLPDPIYEQIKHLERQLEKTRNGEIQDDYII"
     gene            complement(29083..30537)
                     /locus_tag="O7798_000783"
     CDS             complement(29083..30537)
                     /locus_tag="O7798_000783"
                     /EC_number="6.1.1.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499082.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate--tRNA ligase"
                     /protein_id="HDC2863054.1"
                     /translation="MSDRIRVRYAPSPTGYLHIGNARTALFNYLYAKHYNGDFVIRIE
                     DTDKKRNLEDGETSQFDNLKWLGLDWDESVDKDNGYGPYRQSERQHIYQPLIDQLLAE
                     DKAYKCYMTEEELEAEREAQIARGEMPRYGGQHAHLTEEQRQQFEAEGRQPSIRFRVP
                     QNQTYSFDDMVKGNISFDSNGIGDWVIVKKDGIPTYNFAVAIDDHYMQISDVIRGDDH
                     ISNTPKQIMIYEAFGWEPPRFGHMSLIVNEERKKLSKRDGQILQFIEQYRDLGYLPEA
                     LFNFIALLGWSPEGEEEIFSKEEFIKIFDEKRLSKSPAFFDKQKLAWVNNQYMKQKDT
                     ETVFQLALPHLIKANLIPEVPSEEDLSWGRKLIALYQKEMSYAGEIVPLSEMFFKEMP
                     ALGEEEQQVINGEQVPELMTHLFSKLEALEPFEAAEIKKTIKEVQKETGIKGKQLFMP
                     IRVAVTGQMHGPELPNTIEVLGKEKVLNRLKQYK"
BASE COUNT         9184 a         6053 c         4602 g        10964 t
ORIGIN      
        1 attttgctgt tcaacaaatt ttctaaaaat tcaaaattaa ttaacagatt tctagaaaga
       61 ctatatcttt tagtataaac gtattaattt cacagagaca agtaatctgt gttttactaa
      121 tatactttac atacaaaaaa ctctttactt taaaatgaac taagctcgcg aattcaataa
      181 gtataatgaa taatattaga attcatgcac tagtttatta aaataaagag taatttaaaa
      241 tatcattccg tgtattaaag tgaatggaaa tgattagtta ttatttttaa cagtatcttt
      301 ttgttcaata gcttctaaca ttaatttagt catgctcgct aaatcatatt taggatcaaa
      361 tccccattcg ccacgtgaac agcttgtatc aatagaatcc ggccaactat tagcgatacc
      421 ttgtctaata ggatcaacat cgtaatctaa tgtaaaattg ggatagtatt cttgaattgc
      481 ttcttttacc atctctggat caaaactcat tgcgctcaaa ttataaccat ttctagtttc
      541 taatttagcg tcgtctgctt ccataagttt aataattgct tcaattgcat catccatata
      601 catcatatcc atatacgtgc ctttatctat gaagcttgta taatgaccct ctcttactgc
      661 tttgaagtat atttcaacag catagtctgt agtaccgcca cctggctctt taacatgcga
      721 gattaaacct gggaatctaa cacttcttgt atctacacca aaacgtttga aatagtattg
      781 acacaataat tctccagcta ctttatttac accatacatt gtcgtaggtt gctgaatcgt
      841 tacttgtggc gtattaactt taggagttga gtctccaaat gcaccaattg aacttggtgt
      901 gaaaaagtgc aaattataag ttcttgcagc ttctaatgca ttcattaatc cacccatatt
      961 taaatcccaa gctagaattg gatttttctc agcagttgct gataataatg ctgccatatg
     1021 cattagacta tccgcttcaa agtccctaac taactcaaac atacggtcac gatctgttac
     1081 gtctaagatt tcaaatggtc cattttgtac aggtgagtct gcttcaggtt ccctaatatc
     1141 tgtagcaaga acattatctg tcccataaat ttctctgcac ttaacaacta attctgtacc
     1201 aatttgtcct aatgcaccag taatcataat ttttttcata gaaatatctc ctttgtctct
     1261 tctatatagc tatagtccat cacaagcgga cataatattc attttcataa taattataat
     1321 ataaaagcgc tttcttgtat atatgacatg tacatgttgc tgatatttct gtaaatggaa
     1381 attctagttg tattaattga ttttagtaat ttatagcgtt tattattgct aattactgtc
     1441 aaattaaatt ttttatccct caactcttaa actctggata tctttcatta tattagcttt
     1501 tttataacca tggatatcat gtaaagcctt ataagcttta aataatgttt catacctttg
     1561 tactttttcc gcttctggat taatttcgta taaaattggc tctttcatag catcaactgc
     1621 gtcattaatt gaattatgtg cgccaccact gactgcacct aatattgctg cgcctattgc
     1681 tggtgcatac tcactatcca taacaattag ttttttattc agtacattcg catagatatc
     1741 catcataaca gcattctttt taggtatacc gccacatgca aatacctttt ctacttccat
     1801 atgccaatct tgatactgtt gcataatcat cttagtacca aatgctgtag cttctaaata
     1861 tgctctataa atatcctcat gcttagtttg taaagttaat ccaaagatac aacctgttaa
     1921 attgctatca cttaatacac ttcgatttcc attatgccaa tcaagagcaa tgagcccact
     1981 ttcacctggc atttgatgtt ttatcttttc attcattaat tcaaatacag tcatatttct
     2041 attttctgct tcatctacat atgactttgg tgcttgctta gcgacatact caaacaaatc
     2101 acctactgct gattgccccg cttcataagc aaataattct ggaataattg ctccttttac
     2161 agaacctgat atacctggca cttgatgttg cttttcattt aacataagat ggcatgtgct
     2221 tgttcccatc accatagtca tttctttatc tttttcagac ccaataccta ataaactagc
     2281 atgggcatca ataataaaag gacttaccat agtttctttt gataatccta atttctgtgc
     2341 cattttatca tccagtttcc ctactgcttc accaatatta acaaccggtg cagatacttt
     2401 atcttgaatt acttttgata atttggggtc tattttatca aataaatcat aatgaaaccc
     2461 tgtttcttct tcccaaaatg ctttgaaacc taatccacaa ttcgagcgta catttttatt
     2521 agttaattta tttacaatcc aatcgcccgc ttccataata taagccgttt tttccataat
     2581 ttctggtgct cgattcatga cctccattat tttgggaatc atccattcac tactaacatt
     2641 atatccataa tggcctaacc acttattatt attttcaata gcagtttgat ataatttctc
     2701 tgcctcttta tatgcaccat gatgtttcca aagtttcaca tacgcatgtg gattgttttt
     2761 aaattgtttt aagttatgta ccgggttaag gttttcgtca gtaaaaataa tagtagatga
     2821 agtaaagtct ataccaatac ctactatatt gtctggatct atttttgatt cacgtactat
     2881 atatgatatt ccttcttcca taatttctaa ataatcatta ctattttgaa gtgcatatgt
     2941 atgtggtatt ttcaaaccat ttaattcact ctcaatgaca ccatgtgtat atggtttcac
     3001 aaattttgat actacttgac cgttagttgt attaattaaa aacacacggc ctgaagcagt
     3061 tccataatca attccaatgc tataagacat catgtttcct ccatatcgct agttgcggtt
     3121 attagttttg caagcgtttt cttaaatcat actcataata ggttctattt tacaagtatc
     3181 acttaaattt tgccaaaaaa aaagagccct catacattta catatgaggc tcctctaatt
     3241 aatatttaat tatttatttt gtattgcatt taacatttca ttaactgcta attttcctaa
     3301 ctcatttgaa gctaaaggac tgtcacctgt taataattta cgatctttta acgttcttcc
     3361 tgtcatatcg tcgttaacta cttttaatcc ttgtttagtt aataaatcag caactaacca
     3421 tttcaagcgt ccaggtaaat aacctatttc aatatttgca ccttcatcta atgagtcagg
     3481 gaagacacaa acagagtatc cttctaatgg agatttttct ctgttaagcc ctgctgaaag
     3541 tagtgctgct ggtccatgac ataatgtaac tataaagcgg tcattgtcta atgcccaatc
     3601 taatgtttgt tgaacgtcct cactttcaga aataccaaca actgcagcat gtccgcctgg
     3661 gataaagaca gataaatagt ctgaatcagg tcctaattca tttttaatca catctgctaa
     3721 tttttttggc tgttttaatt tttctttcaa tttattataa gtacttataa ctgcctcgtc
     3781 ttcagttggc atagcccata attctaattt aactggataa ccagataatg tcgcaacatc
     3841 aacgtcaaaa cctgcttcca ttaaatgatg taaaggtaat aacatttcaa caggatgatt
     3901 acccgtagag aacatttttc cattttccaa taatacatat cgctcttcag cagcaatcat
     3961 caatactttc catttaccat ctttataggc acctttgtgt tcaacaccat caaaatctgt
     4021 tttaggtgct gtatattgac taagggaata tggtgatggg aaaaatgcgt tatcttctgc
     4081 tttatctggc gttggttgct tacttaattc atttacatct tgtgacatag tttattccta
     4141 ctttctctat atagttacta ctagtataga catatactac acactataaa catgtattac
     4201 tattaaaatg ctcattatca aaaataatca aaatgaattt ctttgaaaaa aatacaacta
     4261 aattctacaa gatgctttta aaattcaaac ttcaattttg gggagcacta aacattgata
     4321 tacgaactta ctgttaataa actaaacatt aaaaaaagcc cacgacaata tttgccgtgg
     4381 gaataaataa atattaaatc aacttcattt cttttcctac tttttcataa gccgcaattg
     4441 cttcatctaa catgtctttt gtatgtgcag ctgtaggcat atttcttaca cgtcctgtac
     4501 ctcttggtac tgttgggaaa acgatagatt tcacatagac accttcgtct tttaaacgct
     4561 tactaaattc ttgagttgtt ttttcatcac caataattac tggtgtaatt ggagtttctg
     4621 actcacctgt atcatatcct aattttgaca atccattttt taaatattgt gcattgttcc
     4681 ataatttatc atgtaattca gttgaatcca ttaacttttt aactgcttca gttattgctt
     4741 tggtatcccc aggtgctaat gatgtagaga ataagaatgg tcgtgattgt gcttttaacc
     4801 aatctattaa ctcttttgta cctgctacat aaccgccaac gacaccaatt gctttagaaa
     4861 gcgtacctat ttggaaatcg attttatctt gtaaaccaaa atgtttaacc gtaccagcgc
     4921 ctttacccat aacacctgaa ccatgagcgt cgtcaacata agttaataaa ccaaattctt
     4981 ctgcaatttc tacaatttca ggtaatttag ccacatcacc atccatacta aaaacgccat
     5041 cagtgatata catcacttta ttgtattgac ctgattcaac tgcttctttt gctttcgcac
     5101 gtaaatcatc catgtctgaa tggttaactc gaataatttt agctttagat aagcgacatc
     5161 catcaataat tgatgcatga ttaagctcat ctgataaaat agcatcattt ttattcatga
     5221 cagctgaaat agcagccata ttacaattaa atcctgattg ataagctatt gcagcttctg
     5281 ttcctttaaa ttttgctagt gtttcttcta attcgtcgtg taaatctaat gtaccattga
     5341 ttgtacgaac agcgcctgca cctacaccat gtgtatcaat agctgctttt gcagctgatt
     5401 tcaaatcttc atttgttgct agtcctaaat aattatttga agataagtta atgtatgatt
     5461 tcccattgat tttgatttct ggtccgtttg caccttcaat tgtatctatt tcattataca
     5521 aaccattttc ttttagataa tttatatttt cctctaaaaa ctcatgtaat gattgaacca
     5581 cagtatataa tcccccttaa gtattgtttg gtaatacctt tatcatacag taattctaca
     5641 taacttgaaa gccttatcat tcatagataa aatatctcaa agcaatcatt tagtacgata
     5701 atttcataaa atgttatact ataaacatta ttttagaaag tagtgataag ggtgttagat
     5761 tggttccaac tagcaaataa taaagaaaat aaaacaattc aactcagacg ttatttacac
     5821 caatatcctg agttatcttt tgaagaattt caaacacatg attatattgt taaccaatta
     5881 agccagttat cttgtgatat tgaaactcct atcggccgca atggtatcaa agccacattt
     5941 aaaggcttgg gcacaggacc taccattgca ttaagagctg actttgatgc gttacctgtc
     6001 gaggaattaa acgatgtgcc ttataagtct aaaaatccag gatgtatgca tgcgtgtggg
     6061 catgatggtc atacagcaat tttacttact gtagcagaga ttttagatga acataaacat
     6121 ttattagaag gtaatgttgt attaatattc cagtacggtg aagaaatcat gccaggtggt
     6181 tctcaagaaa tgatagatgc tggatgtctg gaaaatgtag atagaattta cggtacacat
     6241 ttatggagtg gttatcctac tggaactatt cattcacgtg cgggggcaat catggcctct
     6301 ccagatgaat ttagcgtcac atttaaaggt cgtggtggtc atggtgccaa acctcatgaa
     6361 accattgacc caatagtaat catggcagag ttcattttaa gtgcacaaaa aataatttca
     6421 cgtacgatcg atccagttaa acaagctgta ctttcatttg gaatgattca agcaggcacc
     6481 acagatagcg ttattcctga tcaagcattt tgtaaaggta cagttagaac tttcgattca
     6541 gatatacaga atcatgtaat ggacaaaatg gataagcttc tacaaggttt agcaatagca
     6601 aatgatatta actatgattt gaattatatt aaagggtatt tgcctgtcca taataacgag
     6661 aaagcatatc aagttattaa agaagcaaca aatgacttac atgtacgctt taatgaatca
     6721 gatttaatga tgattggaga agatttttca cattatttga aagtacgacc aggtgcattc
     6781 tttctgactg gttgtggtaa tgaaagtaaa ggtattacag cgccacacca taatcccaaa
     6841 tttgatattg atgaaaaatc attaaaatac gctgtagctg tatttttaaa aatcatagaa
     6901 ttagagcaag tatttaaaac aaattaagca tttaaattaa ttgaaagata tgaatctgag
     6961 acataaacta atgaaatgct cccttcaaag tagacattga aaaaatgaaa actttgaagg
     7021 gagcatttta caatgtccaa gactcaacaa ttttatttaa acagtattat cagttataag
     7081 ttttattagt cagtctttca tcaattattg ttcttctaaa tcgaatagcc attacaaaat
     7141 ttacacatta aaaaaagacc cctcgattga gggatcttct ttttatataa aatctaagaa
     7201 attagaaatt atttaatgat ttcagtaaca acgcctgatc ctacagtacg tccaccttca
     7261 cggattgaga aacgagtacc gtcttcaatc gcgattggag cgattaattc tactgtcatt
     7321 tcaacgttat caccaggcat taccatttca gtaccttctg gtaagtgaac aacaccagtt
     7381 acgtcagtag tacggaaata gaattgtgga cgatagtttg agaagaatgg agtgtgacgt
     7441 ccaccttcgt cttttgataa tacgtatact tctgctttga attcagtatg tggtgtaatt
     7501 gaaccaggag cagctaatac ttgaccacgt tgtacgtctt cacgagcaac accacgtaat
     7561 aatgcaccaa tgttgtcacc agcttcagcg tagtctaata atttacggaa catttcaaca
     7621 cctgtaacag ttgttttaga tgtgtcatgt aaaccgatga tttcaacttc ttcaccaact
     7681 ttgatttgac cacgttcaac acggcctgta gcaacagtac cacgaccagt gattgagaat
     7741 acgtcctcaa ctggcatcat gaatggtttg tcagaatcac gttctggagt tggaatgtaa
     7801 gtatctacag cttccattaa ttctaagatt ttttcttcgt attgagcatc gccttctaaa
     7861 gcttttaatg ctgaaccagc gattacaggt acatcgtcac ctgggaagtc atattcgctt
     7921 aataagtcac gaacttccat ttctactaat tctaataatt cttcatcgtc aaccatgtca
     7981 actttgttta agaatactac taatgctggt acaccaacgt tacgtgataa aagaatgtgt
     8041 tcacgagttt gtggcattgg accgtcagca gcagatacta ctaagatacc gccgtccatt
     8101 tgagcagcac cagtgatcat gtttttaacg tagtcagcgt gtcctgggca gtcaacgtga
     8161 gcgtagtgac gtttgtcagt ttggtactca atgtgagaag tattgattgt gataccacgt
     8221 tctttttctt ctggagcgtt gtcaatcatg tcatatgatt gtgcaactga gtcaccattt
     8281 tttgctaata cagtagcgat tgctgctgtt aatgttgttt taccatggtc aacgtgaccg
     8341 atagtaccga tattggcatg ttctttagaa cgatcgaatt tttcttttgc cattataaaa
     8401 tctctcctat tctaattaaa aataatattt aaatttatct ctcatgatag tttctcacca
     8461 tcatgagaaa ttatttatag cgatgcaaaa agaattttac aattctttta taatgcattc
     8521 accccaaaaa atcaaactat aaagatgata gcttacattt aagctcacct tgtattttaa
     8581 cctaggctag ctagtcaaaa caagttatat tattcacctt tatttttctt gataatatct
     8641 tcagcgattg attttggaac ttcagcatag tgatcgaagt acatagtgta agtaccgcga
     8701 ccttgagtgt ttgaacgtaa tgatgttgca taaccgaaca tttctgaaag tggtacataa
     8761 gcattaacaa cttgtgcatt accacgaggt tccataccat caacacgtcc acgacgagat
     8821 gttacgtcac ccatgatatc acccatgtac tcttcaggca tttcaatagt tactttcatc
     8881 attggttcta agattacagg atcacatttt ttagcagctt ctttaagtgc taatgatgca
     8941 gcaattttga aggccatttc agatgaatcg acatcatggt atgaaccatc atataattta
     9001 gctttaacat caattaaagg ataacctgct aaaacaccat tttccatagc atctttaaga
     9061 ccagcttcta ctgatggaat gtattcacga ggaactacac caccaacgat agcgttttcg
     9121 aattcgaaac ctgcgcctgt ttcgtttggt gtgaattcaa tgtgaacatc accgtattga
     9181 ccacgaccac cagattgacg agagaattta ccttgaactt gtgcagatga tttgaatgtt
     9241 tcacgatatg aaaccattgg agcacctacg ttacattcaa cgttgaattc tttcttcata
     9301 cggtctacta agatgtctaa gtgaagctca cccataccac cgatgataac ttgtccagtt
     9361 tcttcgtcag tgtgtgcatg gaatgttggg tcttcttctt gtaatttaac taaagcttga
     9421 gtcattttat cttggtcagc tttagatttt ggctctactg ataagtgaat aactggctct
     9481 gggaattcca ttgattccaa gataatgtca tttttctcac cacataaagt atcaccagta
     9541 cctgtatctt taagacctac cgcagcagcg atatctccag agtatacagt atcgatttct
     9601 tgacgtgagt tagcgtgcat ttgtaataaa cgacctacac gttcacgttt acctttagta
     9661 gagttcttaa cgtatgaacc agatgtcatt gtacctgaat acacacggaa gaatgttaat
     9721 ttaccaacat aagggtcagt cataactttg aacgctaatg cagcgaattc agctgaatcg
     9781 tctgctttcg cgattacttc ttcttcaggg ttgctagcac ggtgaccaat aattggttta
     9841 acgtctagtg gtgaaggtaa gtaatcaatt acagcgtcaa gcattaattg aacacctttg
     9901 tttttgaaag ctgtaccaca aagtactggg tagaattcta cgttagtagt agcttggcgg
     9961 atagcttctt ttaattcaga aactgaaatt tcttcgtcac caagatattt ttccattaat
    10021 tcgtcgctag tttctgcaac tgcttcgatt aagctagcac gagcttcttc agctctatct
    10081 aagtggtctt caggaatttc aatttcttca atttcagtac ctaaatcatt tgtatatttg
    10141 aaacatttca tttcaactaa gtcaatgatt gcttcgaatt cgtcttccgc accaattggt
    10201 aattggattg gagcagcgtt agcttgtaaa cgatcatgta atgtacttac agagtattcg
    10261 aagttagcac ctaatttgtc cattttgttt acaaatacga tacgtggaac accataagtt
    10321 gtagcctgac gccaaactgt ttcagtttga ggttcaacac ctgattgtgc atcaagtact
    10381 gtaactgctc cgtcaagtac acgtaatgaa cgttcaactt ctacagtgaa gtctacgtgt
    10441 ccaggtgtat cgataatgtt tacacggtga ccttcccaag ctgctgttgt tgcagcagat
    10501 gtgatagtaa taccacggtc ttgttcttgc tccatccagt ccatttgtga agcaccttcg
    10561 tgtgtttcac caattttgtg gatacggcca gtgtaataaa gaatacgttc agtcgtagtc
    10621 gttttaccag catcaatgtg agccatgata ccgatattac gagttttttc taatgaaaat
    10681 tctctagcca tgtatttttt ctccttccag tttatattac tgaataaata cgatagatat
    10741 ggcgatgccc taagcatgaa cgcttaatga aaattcatta atatagaaca cactcagggt
    10801 aaaagctttt atcttaccaa cggtagtgag caaatgcttt gtttgcttca gccattttgt
    10861 gagtgtcctc acgtttctta acggcaccac ctgtattatt tgctgcatct aaaatttcgt
    10921 tagctaaacg atcttccatc gttttttcac cacgaagacg tgcatagtta actaaccaac
    10981 gtaaacctaa agtagtacga cgctctggac gaacttctac tggtacttga tagttagaac
    11041 cacctacgcg acgagcttta acttctaata ctggcataat gttgttgatt gcttcttcga
    11101 atacttctaa tgcatcacga ccactgcgtt gttcaactag gtcgaatgct gaataaagaa
    11161 ttctttgtgc tgttccacgt ttaccatcta acataatttt gttaattaat ttagttacta
    11221 acttagagtt atgaattgga tctggtaata cgtctctttt aggtactgat cctttacgag
    11281 gcataatgta aatcctccct tccttatatt aaatatttta agtttaagat ttaattaaaa
    11341 actaaattct tagtttttag gtttcttagt tccgtataat gaacgacctt gtctacgtcc
    11401 gtcaacacct gaagtatcaa gtgctccacg tacaatatgg taacgcacac ctggtaagtc
    11461 ttttacacgt ccaccacgta caagtacaac actgtgttct tgtaagttat gtccgatacc
    11521 agggatgtat gcgttaattt cgatgttgtt tgataaacgc acacgtgcat atttacgtaa
    11581 cgctgagtta ggttttttag gtgtcattgt acctacacga gtacatacac cacgtttttg
    11641 tggtgagttt aagtcagtaa attttttctt tttactgttg aaacctttat ttaaagctgg
    11701 agaatctgat tttttgattt tgctttgtct tggtttacgt actaattggt taatagttgg
    11761 catgtgatat gtcctcctct cttcactttt taatcccaca catccaggtg gttcattttt
    11821 aggttaaata aaatttagta agtaaaacac ttactaattc tcatttaatc aatgctacta
    11881 ttgtcgcatt gacgttaata cctacatgtt tacccaaagc atgtttgctt ttgaaaaaag
    11941 atacaggtat atttttctga ttgatttggc ttaacacgcg agtcattaaa tatacttcaa
    12001 cgtcttcagc aataatcaaa gatgtaactt gatctttctt taacgcttta agcgtttctt
    12061 taagaccaac tacaaaatgt tgtttgttaa agcgtgcaac tttttcctta gacaataatt
    12121 tatcctccaa agttctgctt gcatcaacct ttaatatatt aacattgaac aagagaattc
    12181 gtcaacatta aatcaaataa tttacataaa aataacaaga ggctaaagca ttagcctctg
    12241 ttatatactt gttattccgt tacttcagtt tgagattcaa cttctgcaac tggtttagct
    12301 gttttttcgt attttacgtc gctataacgt ctcataccag taccagctgg aattaactta
    12361 ccaataatta cgttttcttt aagacctaat aagtcatcac gcttaccttt aattgctgca
    12421 tctgtaagaa ctcttgttgt ttcttggaat gatgctgcag ataagaaact ttctgtttca
    12481 agtgatgctt tagtaatacc aagtaatact ggtttagctg ttgcaggacg cttacggtgt
    12541 ttaaatgctt ctctatttgc atctgtaaag ttatgaatat caactaatga acctggtaat
    12601 aacttcgtat cacctgcttc gataattcta actttacgta acatttgtcg aaccataacc
    12661 tcaacgtgtt tatcgtcgat ttctacacct tgcatacggt aaactttttg tacttctttt
    12721 aataagtagc tttcagtcgc gtttaatcca gcaacagata agtaattctt aggttcaata
    12781 gaaccttcag ttaatacttc accacgttga actggttgac cgatttctac aataattctt
    12841 gaagtacctg aagcaaggta tgatcttgtt tcattagcac ctttaacaac aatttcttgt
    12901 tgtctatctt ttgctaattt aatatcttct acgacacctt cgatttccgt aattaccgct
    12961 tgacctttag ggttacgtgc ttcgaaaatc tcttgaatac gaggaagacc ttgtgtgata
    13021 tcgctacctg ctaccccacc tgtatggaat gtacgcattg taagctgtgt acctggttca
    13081 ccgatagatt gggctgcaat tgtaccaact gcttcaccaa cttcaacttt ttcaccagta
    13141 gcaaggtttt taccgtaaca tttttcacaa acaccatgtc gtgcgttaca agtaaatgct
    13201 gagcgaatat acatttgttc aataccagca tctgtaattt tcttagcaat ttcaggtgta
    13261 attaattcat caggacgaat gattatttca tcagtttcag gatgacgaat tgtttcttta
    13321 gaataacgac cttcaatacg ttcgataaat ggttcaatca tttctgtacc ttctttaata
    13381 tcagaaacta ataaacctct atcagtacca cagtcttctt cacgaacaat aacatcttgt
    13441 gccacgtcaa caagacgacg agtaagatat cctgagtcag ctgttttaag tgctgtatcg
    13501 gcaagacctt tacgtgcacc gtgagttgag atgaagtatt caagtactgt taaaccttca
    13561 cggaatgaag atgtgattgg taattcgata atcttaccag atggtgcggc catcaatcca
    13621 cgcatacctg ctaactgtgt aaagttagat gcgttaccac gggcacctga atcactcatc
    13681 atgaagattg ggttagtttt atcaagtgat tgcatcaatt caccttgaat ttgatctttt
    13741 gcatctgtcc aaatttcaac aactgcatta tatctttctt cttcagtgat taaaccacgg
    13801 ttgaattgtt ttgtaattct gtcgactaat ttttcatgct catcaagtat ttgttgctta
    13861 tcaggtaata ctacgatatc agcaacacct actgtaatac cagctttaga tgagaatttg
    13921 aatcctaagt ctttcatacg gtctaacatc attgatgtat cagtgatgct aaatctgttg
    13981 aatacttctg caataatatt acctaagaat tttttgttga aaggttcaat taattcttca
    14041 ttttcaaagt attcttttaa tccaccttca cctaaagttg taggatcgat gaaatatctg
    14101 tttggtgtct ttctttctaa gttttcttgc gtaggttcat taatataagc aaatgaatct
    14161 ggaatgattt cattgaatat aattttacct actgacgtag caagaatctt tttgttttgt
    14221 tcttcagtaa atgttggatt attgaacgaa cttgcatgta caccaattct agtgtgtaaa
    14281 tgtacaaagc catttgcata tgcttttaat acttcatttg tattattaaa gattgcgcct
    14341 gtatttactg catcttttct ttctaaagta aggtaatagt taccaagtac catatcttgt
    14401 gatggtgtaa ctacaggttt accatcttta gggttcaaga tgttttgtgc tgctaacatc
    14461 aacattcttg cttcagcttg tgcctctttt gataaaggaa cgtgaaccgc catttggtca
    14521 ccgtcaaagt cagcgttata agctgttgtt acaagtggat gtagacgaat cgcacgacct
    14581 tcaactaaag ttggttcaaa tgcttgaata ccaagtctat gaagtgttgg tgcacggtta
    14641 agtaatacag gatgttctct aattacttct tccaatacgt cccaaacttc atcatccata
    14701 cgttcgattt tactcttcgc atttttaatg ttagttgcaa tttcacgttg aactaattct
    14761 ttcattacga atggtttaaa tagttcaagt gccatttctt ttggtaaacc acattggtac
    14821 attttcaagc ttggacctac tgcaataact gaacgtcctg aatagtcaac acgtttacca
    14881 agtaagtttt gacggaaacg accttgttta ccttttaaca tatgagataa agattttaat
    14941 ggacggttac ctgggccagt aactggacga ccacgacgac cattatcaat taaagcgtca
    15001 acggcttctt gtaacatacg tttttcgttt tgaacgatga taccaggtgc acctaaatct
    15061 aataaacgtt tcaaacgatt atttcgatta attacacgac ggtataagtc gtttaagtca
    15121 cttgttgcaa atcgtccacc atctaattga accattggac gaatttctgg tgggatgatt
    15181 ggaagtacat ctaaaatcat ccatgaaggt ttgttacctg aattacggaa tgattcaaca
    15241 acttctaaac gtttaattgc acgagtaagt ctttgaccag tagctgattc caactcatcg
    15301 cgtaacaatt taagttcttc gtcaagatca atctcttcaa gtaaatcttt aataccttct
    15361 gcacccattt ttgcaacgaa ttgacctggg tatttatcat aataatctct gaattcagct
    15421 tcagataata aagttttctt ttctaaacca gttggacctg gatctacaac aacataagaa
    15481 gcaaagtaaa taacttcttc taatgctctt ggtgacatgt caagtaataa tcccatacga
    15541 cttggtatac ctttgaaata ccaaatgtga gaaactggag cagcaagttc aatgtgaccc
    15601 attctttcac gacgtacttt agatttagtt acttcaactc cacatctgtc acagaccatg
    15661 cctttgtagc gaacacgttt gtatttacca caactacatt cccagtcttt tgtaggtccg
    15721 aaaattcttt cacagaatag accatctttt tcaggtttta atgtacggta gttgattgtt
    15781 tcaggttttt taacttcacc aaaagaccaa gaacggattt tttcaggtga agccaatcct
    15841 attttcatat aatggaaatt atttacatca atcaaggagc ctacctcctt caatttagat
    15901 tagctgtgct atttgattga tttgcattta tttaaaatgg cttaaagtac taaactgaat
    15961 catcaataaa attcagctta gtatcttttt gcctgttttg taaattgcgt attaatcagt
    16021 aacttctttt tgtgtttcag gagcatcatt ttgttgtaaa tctactttgc gttctacaac
    16081 atcatcgtca tcaacgtctg tcatttcgat ttcattatct tgctcatcca taacttttac
    16141 atctaaacct aaactttgta attctttcat caatactcgg aatgattctg gaacacttgg
    16201 tctagagatg ttttcacctt taacaatagc ctcgtatgtt ttcacacgtc ctactgtatc
    16261 atcggatttg taagttaaga tttcttgtaa tgtgtatgca gcaccatatg cttcaagtgc
    16321 ccatacctcc atctcaccaa aacgttgtcc accgaattgc gctttaccgc caagtggttg
    16381 ttgtgtaaca agtgaatatg gtcctgttga acgcgcatgt aatttatcat caaccatgtg
    16441 cgcaagtttc aacatgtaca ttacacctac tgaaatacgg ttatcgaatg gttcacctgt
    16501 acgtccatca taaagtacag ttttaccatc acgagccata ccagcttctt caattgttga
    16561 ccatacatcg tcatcgtttg caccgtcaaa tactggtgat gcaacgtgaa taccaagatt
    16621 tttagcagcc atacctaagt gtagctctaa tacttgtccg atgttcatac gagatggtac
    16681 accaagagga tttaacatga tatcgatcgg acgtccatct ggtaagtaag gcatatcttc
    16741 ttcaggaaca atcttagaaa tgacaccttt gttaccatgt cgaccacaca tcttatcacc
    16801 aacatgaatt ttacgttttt gaacgatata tacacgtact aattggttta caccaggtga
    16861 taatgtatcg tcgccttctt cacgattgaa tacttttaca tcaagaacga taccgccagc
    16921 gccgtgaggt acacgtaatg aagtatctct aacttcacgt gctttttcac caaagattgc
    16981 atgtaacaat ctttcttcgg cagttaactc agttacacct ttaggcgtta ctttaccaac
    17041 taaaatatct ccatctttta cttctgcacc aatataaacg ataccacgat cgtctaagtt
    17101 cttaagtgca ctttcagaaa cattaggaat atctcttgtg atttcttcag gtcctaactt
    17161 agtatcacgt gcttctgatt catactcttc aatatgaata gaagtataca cgtcatcttt
    17221 cacaagtctt tcactcatga taacggcatc ctcatagttg taaccgtccc aagtcatgaa
    17281 accaactact acgtttctac ctaatgccat ttctcctaat tccatagatg gtccatctgc
    17341 taaaatctcg ttatactcaa caacatctcc aactgcaacg attggacgtt ggttgtaaca
    17401 tgtacctgag tttgaacgtt taaatttagc taatggatag cgatctaatt caccttcatg
    17461 ctcaacgccg ttctcttcaa ctagacgacg aacaagaatt tcattagatt caacatgttc
    17521 aacacgacct ctgtgcttag ctgtaatagc cgcaccagaa tcacgtgctg caacgtgttc
    17581 catacctgta ccaacaaatg gtgcttctgg attcatcaaa ggcactgctt gacgttgcat
    17641 gttcgcaccc atcaatgcac ggtttgagtc atcattttct aagaatggaa tacatgctgt
    17701 cgctgctgaa acaacttgct tcggcgatac atccatataa tccatttttt ctttagccat
    17761 aactgtattg ttaccacgga aacgacatac aacttcatca tccatgaaac gaccattttc
    17821 atctaattta gagtttgctt gtgctacaac atagctatct tcttcgtcag ctgttaaata
    17881 gtcaatttga tcagtgatag catgtgtatc taaatcaact ttacgatatg gtgtttcaat
    17941 aaagccgaat tcatttacac gtgcataact tgataatgag ttaatcaatc caatgtttgg
    18001 tccctcaggt gtttcaattg gacacatacg gccatagtga gagtagtgaa cgtcacgtac
    18061 ttccatttga gcacgttcac gtgttaaacc accaggtcct aatgctgata gacgacgttt
    18121 atgcgttaac tcagctaatg ggtttgcttg gtccatgaat tgtgataatt gagagctacc
    18181 aaagaattct ttaatagatg caataacagg tcgaatatta attaattgtt gaggtgtgat
    18241 agactcagta tcttgaattg acattctttc acgtacaact ctttccattc ttgataaacc
    18301 gatacggaat tggttttgta gtaattcacc tacagaacgt aaacgacggt tacctaaatg
    18361 gtcaatatca tctgtatatc caataccgct taataagtta aagaagtaac tcattgaagc
    18421 aatgatatct gctggtgtaa tgcatttaac ttctgagtca gggaaagcat taccaattac
    18481 agttgtcgta cgaccttcat catcgttagg aacatatact ttaattgatt gaatttctac
    18541 tggctcgtct ataacgctac catgcaattc aaacacttcg ctgtttgcat ttgattcaag
    18601 tacatccatg atttcgtcga ttttacgacg atcaagcact gtaccttctt caactacaat
    18661 ttcaccagtt tcagtattta caattggctc agctaatttt tgattaaata aacgatgttt
    18721 taaatgtaat tttttgtttg ttttataacg acccacgctt gctaagtcat agcgttttgg
    18781 atcaaagaaa cgtgaataca atagactttt agcattttca acagttggtg gttcacctgg
    18841 acgtaaacgt tcatagattt ctaataacgc ttgttcagtg ttttcagtgc cgtctttctc
    18901 taaagtatta cgtaaatatt cattgtcacc taaaaggtca acaatttctt ggtcgcttga
    18961 gaaacctaat gcacgtaaca atactgttaa tggtagttta cgtgttctat caatacgtac
    19021 gtatacaaca tctttagcat ctgtttcata ttctaaccat gcaccacggt ttggaataat
    19081 tgttgcatca tagttttcac gaccattttt gtcgattttt tcattgaaat aaacggatgg
    19141 tgaacgaact aattgagata cgattacacg ttctgcacca ttgataacga acgtacctgt
    19201 atcagtcatt aatgggaaat cacccataaa gacttcttgt tctttaactt ctcctgtttc
    19261 tttaatgatt agacgcactt ttacacgaag aggtgcagca taagtagcgt cacggttttt
    19321 agattcttct aaatcatatt ttggttctcc taaacggtaa tccacaaact ctaatgacaa
    19381 attaccagta aaatcttcaa ttggagaaat gtctctaaac atttcgatta aaccttctct
    19441 taggaaccac tcgtaagatt tagtttgaat ttctattaag tttggtaatt ctaatacttc
    19501 tgaaattctc gcgtagtttc tacgtttacg atgtcttcca tattggacaa cttgacctgc
    19561 caaacagatt cacccctcaa aaattatgtg atccgctttt agctaaatac cataagcata
    19621 ttaataaaaa gacaaaaaga aaacggcaac actaatgatg acaccatttt cgattctata
    19681 tttattctta attaacttat ctatttaacg taaaagtaca cacttattga acataaattt
    19741 ttacattata taactataac agaatatcca tttcatttca agcttttata cttctcagaa
    19801 tgtaatatcc tttatcttta tttaccactt ctacatttcc aaaaagttca ttcattcttt
    19861 tctttgcaga tggcatacct tgcttcttct gaattacaac gaatagttca ccgttcgagt
    19921 ctaatctatg taatgcttgc tcgaatatac gatgcacggt ttctttccct gctcttattg
    19981 gtggattggt taaaataaaa tcaaaacttt tgtcttccac agcagacaaa gcatcacttt
    20041 cctttacgat cacattatca ataccattta attttttgtt tttttcaact aaggctagcg
    20101 ctctgtgatt aacatctagc attgtaattg aatgatgtgg tgatacttta gcaatcatca
    20161 aaccaattgg tccgtaacca caaccaacat cggcaattcg cttacttgga ccaggtggat
    20221 gcgcttttaa aaaagtttga acaagaacat ctgaaccata atctacttta tctttcgaaa
    20281 acactccgtt atcagttatt aaatcaattt tatgatggtt taattgatat tgaatacgtt
    20341 gttcattgct aattacactt ggatcttcat cgtaataatg actcattatt ccacctcatc
    20401 ttcactttgt aactcgtcat tataattata acatttcact cagtctttaa atgaataaaa
    20461 ccccgttatc aaaataacgg ggttttaact tctcaaagaa tcattatatt atagcaatac
    20521 ttgctataaa actttgatta ttaagtttaa gatacttgaa ttattttaat tctacagtag
    20581 ctccaacttc ttctaattgt tctttaagtt tttcagcttc ttctttaggt aaagcttctt
    20641 tgattacttt aggagctccg tctactaatt ctttagcatc ttttaatcct aaaccagttg
    20701 cttctttaac agctttaaca actttgattt tagatgaacc agctgaagtt aactcaacgt
    20761 caaattcagt tttttctgct gcagcgtcag cgccaccagc tgcacctgct actgctactg
    20821 gagcagctgc agttacacca aattcttctt caattgcttt tactaagtcg tttaattcta
    20881 atactgacat ttctttaatc gcttcaatga tttgttcatg attagccatt ttataattcc
    20941 tccattattt ttaatttttt tacgctaaaa attattcagc gttttcttct ttttgttctc
    21001 caatagcttt aaccgcataa gcgaagttgc gtacaggagc ttgtaatact gataaaagca
    21061 tagatacaag accatcgtgt gaaggtaatg aaccaacagt tttaacttct tctgctgtaa
    21121 taacattgcc ttccataacg cctgatttaa tttctaatgc ttcatgatct ttagcaaatc
    21181 cagaaattac tttcgctgca gctacagcat cttcacttga agttgcaata gcagtaggac
    21241 ctgttaagaa ttcatctaag ccttcgatac cagctttttc agctgcacga cgtaccatag
    21301 tgtttttgta tactttatac tcaacaccag cttcacgtaa ttgtgaacgt aagtcagtaa
    21361 cttcagctac tgttaatcca cggtagtcaa cgattactgt tgaaactgaa tttgatagta
    21421 cctcagcaat ttcatcaact agttgttttt tagcttcaat gatagcagac attcagacac
    21481 ctccatttaa atttttggtg ctttttttta aattaataaa aaaagcactt tctacccacg
    21541 gcaaaaagtg cttgaaagat catagatcat cacattcaag tcaattttag cctcggcagg
    21601 ataaatttta agttataaat aactcctact gtcttaggta aaataatcac aataagtaat
    21661 ataacttgga aattacttat tgtcaatata tttttacaga ctgaaagata tttctttcag
    21721 cctgtaattg tttatatcat ttattatttg aaacttgcag tatcaatttt aactccagga
    21781 cccattgttg tagttacagc aacagatttg aagtatgtac ctttagcaga tgatggttta
    21841 gctttagcta atacatcttg taaagtattg aagttttcaa ttaattgttc atcagtaaat
    21901 gaaactttac caattgatgc atgtacgata ccagcttttt cagcacgata ttctacttta
    21961 ccagctttga tttcttcaac agctttttta acatccattg ttacagttcc agttttaggg
    22021 tttggcatta aaccttttgg tcctaataca cgacctaatt taccaacttc acccatcatg
    22081 tctggtgtag caactactac atcgaagtcg aaccaacctt gttggatttt ttgaacgtat
    22141 tctgcttcac ctacatagtc agcacctgct gcttcagctt cagcaatttt gtcaccttta
    22201 gcgaatacta atacactttg tgatttacca gttccgtttg gtaatacaac tgcaccacgg
    22261 atttgttggt catttttacg tgtatcaatt cctaaacgga atgcaacttc aacagaagcg
    22321 tcaaagttag caatgcttgt ttctttagct aatttaattg cttcttcaac actgtagtgc
    22381 tgagtacggt caactttact agctgcttct tgatactttt tacctttttt agccatttat
    22441 agttcctcct ttagtggttt tagcggaatt tcctcccaca ttacttgcta tatgcaagtt
    22501 aagagcagac aacagaagaa ttaatcttat gaataaatca atcattaatc tagtcattca
    22561 gattatattt ataattcatc attattatct ctgttatctg cttcatcgtt taaatcatgt
    22621 aatcaaattt aatattcgta aaattattct acaacgatac ccatactacg tgcagtacct
    22681 tcgataatac gcatagctgc ttcttcgtca gcagcgttta agtcttgcat tttgctgtta
    22741 gcaatttcgc gtacttgatc tttagttact gtagcaactt tagttttgtt tggttcgcct
    22801 gaaccttttt caataccagc tgctttttta agtaatactg gagccggtgg agtttttgta
    22861 ataaatgtaa atgaacgatc ttcataaaca ctgatttcta ccggaataat taaacctgct
    22921 tgatcttgag tacgtgcatt gaactcttta cagaatccca tgatgttcac acctgcttga
    22981 cctaatgctg gaccaactgg tggtgctgga ttcgctttac ctgcaggaat ttgtaattta
    23041 acaactttat ctactttttt agccacgatg tgcacctcct tgatatcgtg atgtggtcac
    23101 agggctcagt tttgccctcc cactcttaac atttcgtgac gaaatgggcg ctctaaaagc
    23161 gcgaccacat aattttaaca cttttctaat taaaaaatca atactctttt ttatcttttg
    23221 gttagtttaa taactttaat tgttaattaa agcttttcta tttgatcgaa ttcaacttct
    23281 actggtgttt ctcggccaaa catatctact aatactgtta gcttaaactt atctgtttca
    23341 atttcttgaa cttcaccaac ttgattcgca aatggacctg atttaatacg aacttgctcg
    23401 ccaacttcga gttcaacatc gatagtcttt tctttaagac ccatttgttt taagatgaag
    23461 cgaacttctt ctggtaacaa tggatttggc ttagaccctg cacctgcaga acctacaaaa
    23521 ccagtaacgc ctggtgtatt tcttaccaca taccatgatt catctgtcat gattaattcc
    23581 actaaaacat atccagggaa tgttttttta acagtcgttt tagctttgcc atcttttact
    23641 tgagtttctt cttcttccgg tatgactact ctaaagattt gttcagtcat attcatagat
    23701 tctactcttt tttctaaatt ctttttaact ttattttcat atccagaata tgtatgcact
    23761 gcataccaac gctttgcgcc aacttcttca gacatgtctt cactcctcta accaaataat
    23821 aaatttttca atgctgtaat tcctaaatct aaggcataga aaaagactaa gaagaatata
    23881 acagtagaaa ctacaattac agtatattta aatagctctt ctttcgtcgg ccaacttgtt
    23941 ttttccattt cagacttaac gcctttaaag aaactttctt ttttagccat ctgctcaacc
    24001 tccaaatcct ttgaacatat tatcaaagta ttatttcgaa tgtatttatt tcgattcttt
    24061 atgaattgtg tgcgcgttac attttggaca atatttcttt aaggttaatc ttgttgccga
    24121 gccttcttgc ttaggaacat tataatttct attgccacaa gcttcacaat ttaaaggtat
    24181 ttttctcaca ataattcacc tttattcatt ataataccag tatactatac ataaaattta
    24241 taacaaatgt caaaccatca gtaagtaaca cgttataatt caattcacgt cctaaggcgc
    24301 ttttcaaatc attttgaaat aacgttttat tttattttta catcgttgta tggcattata
    24361 aatcactttc tcttttacat gcatcaattg agcaatttct ctcggcttat attgttcaca
    24421 cattaaatac atgacatctt tttcaaatgc actcaaatac ttaaactgac aaatcaactc
    24481 tttaattgct aatttattca aataattgtt ttcaacatca aaacgcttta ttgcacatgg
    24541 atacgtaact ctatattcat taatcaaatt atccattctt ttatttgtag ctaaatattt
    24601 tctcaaataa tcatacttta cagacgtaat taaacattga acataatttg tgaaaggctg
    24661 ctctccacta aaatcaaatg tttggaccga cctatacatc cgtataagta tttcttgata
    24721 taagtcttct aaatcataat gattaaatcc aaatgttttg atgcgtcgaa taattaatgg
    24781 ttgtagatcc attactaact tttcgaagtc tttatcattt attgcattgt tacgtttgat
    24841 tgtactgtct tgagttgtca aatcgtattt caaatattaa actaacccct tctatctaaa
    24901 atttaaggtt agtttaatat tgttacattc aaaatttcaa gatgacggaa atgtcatttc
    24961 ttatgatgtc ctcttcgtat tttttcaaat tctgcaagga tttcagaaga taacggaatt
    25021 cgagttcttg gcttgttttc acttatatca tctaatgatt tactcacatc aatttcattt
    25081 tcttttaaat ctctccacat ttcgcgagat gatattctat atgcacctga tccaaagata
    25141 gcatgttgct cactcatatc acttgttaca actgtaatat gcttagtatg cttgtcataa
    25201 agttcataaa cataacgttc tatgaaacta tcagctgttt ctttttcctt ggtaaaaatc
    25261 gttttaacgc catgatacat gtattctctt tcaacacccg attggtcata agcatcgaaa
    25321 acacaaataa tttcatctga aataactgca ttataatttg caattgcatc tattaattgc
    25381 attctagctt cttctaaatt ctcttttgca atggcgctta gcgttggtga ttgtcctatc
    25441 atattgtatc catcaatgat taagtaacgt tctttcatta tatttctcca acatcatgtc
    25501 tttttcgaaa tacttcgtac atcattaaac ttgctgcaac cgaagcattc aaactgttta
    25561 catgtccaac cattggaatc ttaatataaa aatcgcattt atcacttact aggcgactca
    25621 taccctgtcc ttcgctacca attacaatag ccaatgacat gtccgcttct agatttctat
    25681 aatctgttgc attattagct tcagtgccag ctacccaaaa gccattatct tttagttcat
    25741 cgatagtttt agctaaattt gtcactcgaa taactggtac atgttcaatt gcacctgttg
    25801 aggcttttgc aactgtttgc gttagtgtaa ctgaacgacg tttaggaata ataacaccat
    25861 caactcccgt tgcatcggct gttcttaaaa ttgatcccaa gttatgtggg tcttctaagc
    25921 cgtctaatat aagtactgtc aataaacctt ctttttcttt ttgctgtttt aaaaattgat
    25981 cgaagtcagc atattcatat ggtgcaataa gcgctgcaac accctgatgt ggtgcatttg
    26041 ctaaaaaatc taatttagat tttggtacag tttgaacaat gattttttga tcttttgcat
    26101 tttttaaaat ttcattaatt tgttgctttt taataccttc ttgaatcaat atcttattta
    26161 tcggatgccc agtaataatc gcttctctaa cagcatgcct accaacaata accgtatctt
    26221 ccacatcgtc actacctttc gtttactatt gttattattt tatttaataa tgcctctaat
    26281 cgttcttctc ttttttctaa ataaagaaaa cctatcactg cttctatcgc tgaactttta
    26341 cgatatgttt gaacatcagt gtttttagct ttagtatgac ttttcgcgtt acgccctcgc
    26401 ttcaaaatat ccatttcttc gtctgtaaac cattcttgct ccattaaata ttctaacgtt
    26461 tgcgcctgac ttttggcaga tacatatttt ttagacattt gatgtagttt attaggctta
    26521 cttttaagct ttaaaacgat ataggtacgt acatattgat ctaagactgc gtctcccata
    26581 tatgctaagg tcaatggatt caataattta atgtgattat cttgttgatt atccacgttt
    26641 aaatctaacc ccttgaggtg tgtcttctaa tataatgttt tgtgatttca gcatgtctcg
    26701 aatttcatct gctcgtgcaa aatctttgtt tttccttgct tcattacgct cttcgattaa
    26761 tttttcaaca tcttcatcca ataattcatc tgcattttta gattttaacg gtacacctaa
    26821 aacatcgctg aaaatttgat aaactgcttt aaatttatca attacttctg ttgatgttgt
    26881 gttctctagt acatatttat tcgcaagttt tgctaaatca taccaagctg taattgcatt
    26941 agctgtatta aaatcatcat tcataactgt ttcaaaacga tttaaaatcg catcaatttg
    27001 atcaatatat gtctgttgat tttcaatatt agtagcaatt tgtgcgcgct cttcaattaa
    27061 ttgataacta ttgcgaatac gctctagtcc actacgtgct gattctacca attctagatt
    27121 atagttaatt gggcttctat aatgtacgct aatcataaag aatcttagta catctggatc
    27181 aacttcttta ataatatcgt gaactaaaat aaagttgcct agtgatttac tcattttttc
    27241 attatcaata ttaatgaaac cattatgcat ccaataatta gcaaatggcg catgattatg
    27301 tgcttctgat tgtgctattt cattttcatg atgtggaaat tgtaaatctg aaccacccgc
    27361 atgtatatca attgtaggtc ctagctcatg aaatgccatt acagaacatt ctatatgcca
    27421 tcctggtcta ccttcaccaa atgggctatc ccaactaatc tcgccaggct tcgctttttt
    27481 ccacaatgta aaatcaagtg catcttcttt atgctctcct gcatctatac gagcacccac
    27541 ttttaagtca tctatggatt gatgacttaa tttaccataa ccttcaaatt tacgtgttct
    27601 aaagtaaaca tcgccaccac tttcatatgc ataaccttga tccaccaaat ctttaataaa
    27661 ttgaataatg tcatccatat ggtccattac ccttggattt gaagtcgctt ttctaacatt
    27721 taacgcacca acatcttcat gaaaagcagc gatatatttt tctgcaattt cgggaacaga
    27781 ctgatttaat tcttgagaac gtttaattaa tttatcatct acgtctgtaa aatttgatac
    27841 atattctaca ttatatcctt ggtattcaaa gtaacgtctc actacgtcat aattaattgc
    27901 tggtcttgcg ttaccaatat gaatgtagtt atatacagta ggaccacata catacatttt
    27961 tactttccct ggttctatag gcttgaacac ttctttttga cgtgtaagcg tattatataa
    28021 tgtaatcatc ttgaatctct ccattcctag tcttttcaag ttgtcgttct aaatgcttaa
    28081 tttgttcata aattggatca ggtagatggc gatgatcaaa tgtttttcca actcgaacac
    28141 catcttgctt aacaatatgt cctggtatac caacaaccgt tgaataactt ggaactgatt
    28201 gtaaaacaac tgaatttgca ccaatattta catttgaatt tattttaata tttcctaaaa
    28261 ctttcgcacc ggctgctatt aaaacattgt ctcctatatc tgggtgtctt ttccctcttt
    28321 ctttccctgt cccaccaagt gtcacgcctt gatagattgt cacattatca ccaattgtac
    28381 atgtttctcc tattacaacg cccataccat gatctataaa tagacgcttt ccaattttag
    28441 cacctggatg gatttctata cctgtgaaaa atcttgaaat ttgagatatc gcgcgtgctg
    28501 caacatattt tttttggttg tataacttat gtgcaatcaa atgactccaa actgcatgta
    28561 aacctgcata cgttgtaatg acttctaatg ttgaacgtgc cgctggatcc tgctcaaata
    28621 ccatttttat atcgtctctc attcttttta acaagatcat ttcctcctca atgattgaac
    28681 tacgtaaata cataattgaa gtacctgcga aattaaatat caaaaaagca ccactaacat
    28741 acaaattgta ttgttagagg cgcttccgca cggttccact ctgaatttag cgaataacat
    28801 taataatatt gcgggcgctt ccaaattatc aaggaaacta agtcaactta atgctcatca
    28861 ctctcattat atatttaatt cattttacga aggtgcattc attaatttct acgttgtact
    28921 cacagcaacc gtacactctc tgcatcgtat aaatttaatt actaatcctt cgttttatat
    28981 aaaatacttt attcatattg ttgtaatttg ttaatacaac tttatcatat gtggttacgt
    29041 tataaaattc aagtatatac taccttgatc ttgtctattt cattacttat attgttttaa
    29101 acggtttagc actttttctt taccaagtac ttcaattgta tttggtaatt caggaccatg
    29161 catttggcca gttacagcaa cacgaatagg cataaataat tgcttgcctt ttattcctgt
    29221 ttctttttga acttctttaa ttgtcttttt aatttcagcc gcttcaaatg gttcaagtgc
    29281 ttctaattta ctgaataagt gcgtcattaa ctctggtact tgctctccat taatcacttg
    29341 ttgttcttct tcaccaagag ctggcatttc tttaaagaac atttctgata aaggtacaat
    29401 ttcaccggca taactcattt ctttttgata aagcgcaatt aatttgcgtc cccaagataa
    29461 atcctcttct gacggcacct caggaatcaa atttgcttta attaaatgag gtaatgctaa
    29521 ttggaatact gtttcagtat ctttttgttt catatattgg ttattaaccc atgctaattt
    29581 ttgcttatcg aaaaatgctg gtgattttga caaacgcttt tcatcaaaga ttttgataaa
    29641 ttcttcttta gaaaagattt cttcttcacc ttcaggagac caacctaata acgcaataaa
    29701 attaaataac gcttcaggta aataacctaa gtcacgatat tgctcaataa attgtaaaat
    29761 ttgcccatca cgtttactta actttttacg ttcttcatta acaattaatg acatatgacc
    29821 aaaacgaggt ggctcccagc caaatgcttc ataaatcata atttgtttag gcgtgtttga
    29881 aatatgatca tcaccacgaa ttacatctga aatttgcatg taatgatcat ctatagctac
    29941 tgcaaaattg tacgttggaa tgccatcttt ttttacgata acccagtcac caataccatt
    30001 tgaatcaaat gaaatatttc cttttaccat atcatcaaat gaatacgttt ggttttgagg
    30061 tactcggaaa cgaattgatg gttggcgtcc ttctgcttca aattgttgac gttgttcttc
    30121 agtcaaatgc gcatgttgac caccatagcg aggcatttca ccacgagcga tttgcgcttc
    30181 acgttcagct tctaattctt cttctgtcat atagcattta tatgctttat cttctgctag
    30241 taactgatct attaatggtt ggtagatatg ttgacgttca gattgacgat atggtccgta
    30301 gccattgtct ttatctacag actcatccca atctaatcct aaccatttaa gattatcaaa
    30361 ttgtgatgtt tctccatctt ctaaattacg ttttttatca gtatcttcaa ttcgaatcac
    30421 aaaatctccg ttgtaatgtt tagcatacaa gtaattgaat aatgctgttc ttgcattacc
    30481 aatatgaaga tacccagttg gacttggtgc atatcttact cttatacgat cgctcatttt
    30541 tttcactcct aaattaaata tcagattttc aagttagttc atataaattg ttcatttgct
    30601 atcttcgacc gtcataacaa atgtctaact cgtcttattg ttaaaacgaa acaatgcttt
    30661 ttaacatgac cttaaaataa tttcattgtt taatcataac ataattccct gggtaatatg
    30721 cttaaatttt aaatagaaag ctgttgtttt ttcaacactt taaaaaagct atccctaaga
    30781 atcaagactg cactacataa aca
//
LOCUS       DALPQQ010000020        26513 bp    DNA     linear   BCT 22-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus strain K18-6-464
            SAMD00233528-rid16434743.denovo.020, whole genome shotgun sequence.
ACCESSION   DALPQQ010000020 DALPQQ010000000
VERSION     DALPQQ010000020.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMD00233528
            Sequence Read Archive: DRR236061
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 26513)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 26513)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001543423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001543423.1
            Genome Coverage       :: 77x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/22/2022 17:09:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,811
            CDSs (total)                      :: 2,743
            Genes (coding)                    :: 2,689
            CDSs (with protein)               :: 2,689
            Genes (RNA)                       :: 68
            rRNAs                             :: 2, 4, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 4, 2 (16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 54
            CDSs (without protein)            :: 54
            Pseudo Genes (ambiguous residues) :: 0 of 54
            Pseudo Genes (frameshifted)       :: 27 of 54
            Pseudo Genes (incomplete)         :: 27 of 54
            Pseudo Genes (internal stop)      :: 10 of 54
            Pseudo Genes (multiple problems)  :: 10 of 54
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..26513
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMD00233528-rid16434743.denovo.020"
                     /strain="K18-6-464"
                     /db_xref="taxon:1280"
                     /geo_loc_name="Japan: Niigata"
     gene            complement(468..1745)
                     /locus_tag="O7798_000784"
     CDS             complement(468..1745)
                     /locus_tag="O7798_000784"
                     /EC_number="1.1.1.88"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501315.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydroxymethylglutaryl-CoA reductase,
                     degradative"
                     /protein_id="HDC2863055.1"
                     /translation="MQNLDKNFRHLSRKEKLQQLVDKQWLSEEQFDILLNHPLIDEEV
                     ANSLIENVIAQGALPVGLLPNIIVDDKAYVVPMMVEEPSVVAAASYGAKLVNQTGGFK
                     TVSSERIMIGQIVFDGVDDTEKLSADIKALEKQIHKIADEAYPSIKARGGGYQRIAID
                     TFPEQQLLSLKVFVDTKDAMGANMLNTILEAITAFLKNEFPQSDILMSILSNHATASV
                     VKVQGEIDVKDLARGERTGEEVAKRMERASVLAQVDIHRAATHNKGVMNGIHAVVLAT
                     GNDTRGAEASAHAYASRDGQYRGIATWRYDQDRQRLIGTIEVPMTLAIVGGGTKVLPI
                     AKASLELLNVESAQELGHVVAAVGLAQNFAACRALVSEGIQQGHMSLQYKSLAIVVGA
                     KGDEIAKVAEALKKEPRANTQAAEHILQEIRQQ"
     gene            1999..3165
                     /locus_tag="O7798_000785"
     CDS             1999..3165
                     /locus_tag="O7798_000785"
                     /EC_number="2.3.3.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501316.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydroxymethylglutaryl-CoA synthase"
                     /protein_id="HDC2863056.1"
                     /translation="MTIGIDKINFYVPKYYVDMAKLAEARQVDPNKFLIGIGQTEMAV
                     SPVNQDIVSMGANAAKDIITDEDKKKIGMVIVATESAVDAAKAAAVQIHNLLGIQPFA
                     RCFEMKEACYAATPAIQLAKDYLATRPNEKVLVIATDTARYGLNSGGEPTQGAGAVAM
                     VIAHNPSILALNEDAVAYTEDVYDFWRPTGHKYPLVDGALSKDAYIRSFQQSWNEYAK
                     RQGKSLADFASLCFHVPFTKMGKKALESIIDNADETTQERLRSGYEDAVDYNRYVGNI
                     YTGSLYLSLISLLENRDLQAGETIGLFSYGSGSVGEFYSATLVEGYKDHLDQAAHKAL
                     LNNRTEVSVDAYETFFKRFDDVEFDEEQDAVHEDRHIFYLSNIENNVREYHRPE"
     gene            complement(3335..3856)
                     /locus_tag="O7798_000786"
     CDS             complement(3335..3856)
                     /locus_tag="O7798_000786"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501317.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methylated-DNA--[protein]-cysteine
                     S-methyltransferase"
                     /protein_id="HDC2863057.1"
                     /translation="MEYKSYYDSPVGRLELLSDGVSLTAVLFENQQGDGTREENTSLA
                     IFREATQWLDAYFKGDNPEITIPLKPTGSHFQQCVWNELRQVPYGTLTTYGAIAKKVG
                     KLLNKPKMSAQAVGGAVGSNPLSIIVPCHRVVGKTGSLTGFGGTINNKIKLLELENID
                     MSKLYVPKHSTKP"
     gene            4265..6370
                     /gene="clpL"
                     /locus_tag="O7798_000787"
     CDS             4265..6370
                     /gene="clpL"
                     /locus_tag="O7798_000787"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501318.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent Clp protease ATP-binding subunit
                     ClpL"
                     /protein_id="HDC2863058.1"
                     /translation="MNNGFFNSDFDSIFRRMMQDMQGSNQVGNKKYYINGKEVSPEEL
                     AQLTQQGGNHSAEQSAQAFQQAAQRQQGQQGGNGNYLEQIGRNLTQEARDGLLDPVIG
                     RDKEIQETAEVLSRRTKNNPILVGEAGVGKTAIVEGLAQAIVEGNVPAAIKDKEIISV
                     DISSLEAGTQYRGAFEENIQKLIEGVKSSQNAVLFFDEIHQIIGSGATGSDSGSKGLS
                     DILKPALSRGEISIIGATTQDEYRNNILKDAALTRRFNEVLVNEPSAKDTVEILKGIR
                     EKFEEHHQVKLPDDVLKACVDLSIQYIPQRLLPDKAIDVLDITAAHLSAQSPAVDKVE
                     TEKRISELENDKRKAVSAEEYKKADDIQNEIKSLQDKLENSNGEHTAVATVHDISDTI
                     QRLTGIPVSQMDDNDIERLKNISNRLRSKIIGQDQAVEMVSRAIRRNRAGFDDGNRPI
                     GSFLFVGPTGVGKTELAKQLAIDLFGNKDALIRLDMSEYSDTTAVSKMIGTTAGYVGY
                     DDNSNTLTEKVRRNPYSVILFDEIEKANPQILTLLLQVMDDGNLTDGQGNVINFKNTI
                     IICTSNAGFGNGNDAEEKDIMHEMKKFFRPEFLNRFNGIVEFLHLDKDALQDIVNLLL
                     DDVQVTLDKKGITMDVSQDAKDWLIEEGYDEELGARPLRRIVEQQVRDKITDYYLDHT
                     DVKHVDIDVEDNELVVKGK"
     gene            complement(6439..6609)
                     /locus_tag="O7798_000788"
     CDS             complement(6439..6609)
                     /locus_tag="O7798_000788"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501319.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FeoB-associated Cys-rich membrane protein"
                     /protein_id="HDC2863059.1"
                     /translation="MSVIINILIFLAIFGYALYTLVKFFKRSKQGKCGTCDINRDCCG
                     TEQHTANHFPGK"
     gene            complement(6622..8616)
                     /gene="feoB"
                     /locus_tag="O7798_000789"
     CDS             complement(6622..8616)
                     /gene="feoB"
                     /locus_tag="O7798_000789"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501320.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ferrous iron transport protein B"
                     /protein_id="HDC2863060.1"
                     /translation="MENYCILGNPNVGKTSLFNALTGSYEYIGNWSGVTVEKKVGKLK
                     ENVGQLIDLPGTYDLSPISKDETVVTDYLLNDSFSGIINIVDASQLKRNMQLTVQLLE
                     LNQPIYIGLNMIDVATKRGIKIDYHKLMKKLKTPIFPVVARTGKGTKYLLGEIKHLGE
                     GYQPHFKINYGEKIEETIKNMCQIIMTETSHDKYQARFIAIQFLLNNMQIANELNSEV
                     VNKLSSLRDQVAEQVGAVSVRREMERIRNHYIETLLQDVVTYPDEDKQYFSSRIDKIL
                     THKYIGMPIFLAIMWLIFQTTFTWIGTPLSDQLDAFIGGTFTDSVKTIMNYLGVIPFL
                     QDLITDGIIAGVGSVLVFVPQIVVLFFFISLLEDSGYMARIAVLMDRIMESFGLSGKS
                     FIPMIIGFGCNVPSIMAARSIENEKERLTTILIAPFMSCSARLPVYALFVGIFFKENQ
                     SLVVLSLYVLGIIMAFLVSTVLTKTILKNDNAIFIVELPTYRVPSIKTLWRSTWEKAK
                     GFVRKAGTFIFGGSVVIWLLSYVGPHGINVNINQSFLHMVGSFFGMLVQPLGFGTWQA
                     GATLVPGFLAKEVIVSSMAIIYSSGDAGLVNVIQNQFTPLSAYAFMIFILLYIPCVST
                     VAAIRKETYSWKWTALAVAYPLVTAYVLTFIFYQVGHLFV"
     gene            complement(8628..8855)
                     /locus_tag="O7798_000790"
     CDS             complement(8628..8855)
                     /locus_tag="O7798_000790"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501321.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ferrous iron transport protein A"
                     /protein_id="HDC2863061.1"
                     /translation="MLNIKNGEMNKAYKIKRMDIANENMLYRLSAFGLTDDAIITIKQ
                     KCLFKGPCIIEVNGQQLSIRHCDACSIALEE"
     gene            complement(9071..11560)
                     /gene="farE"
                     /locus_tag="O7798_000791"
     CDS             complement(9071..11560)
                     /gene="farE"
                     /locus_tag="O7798_000791"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001051413.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fatty acid efflux MMPL transporter FarE"
                     /protein_id="HDC2863062.1"
                     /translation="MAKFLYKMGTFIAKHKWSAVIAWIVIVAAILIPLATNAPKFDND
                     IKMTGLESLDTNKKIEKHFNQDSEKAQIRVVFKTTKDDGIVQPNITKDIKKTLDDIKK
                     DDKHIDKISDPYENKQISKDKTTAFADITYDVSQTSLKDGSRDNVKSHLKDLRDNHNV
                     QTELTGTGMTSTEVGGNSELVGIIVAFVVLLITFGSVIAAGLPIISALIGLASGVGII
                     SLLTYAFDIPNVTLTLAVMIGLAVGIDYALFILFRYRQVMKTETDYIKGIGLAIGTAG
                     SAVVFAGVTVVIAVCGLSLVGIDFLAVMGFASAISVVFAVLSALTLLPALISIFHKRI
                     KVNKLQSKFKKDIDTPWSKFITGNALAAVLLGLIILVAAAIPVSHMRLGIPDDGVKPA
                     DSTQKKAYDIISDKFGEGFNGQIPMLINVKDKKDDPQGLQQDLQSVYKDIKDKKNVDI
                     VTPPQMSKDNDYALMVVIPKQGPNAESTNDLVHDLRDYHKDAQDKYGFKTEISGQSVI
                     NIDMSKKLNEAIPLFASVIVVLAFFLLMIVFRSILIPLKAVLGFVLSLMATLGFTTLV
                     MQDGFMKGLFGIETTGPMLAFLPVITIGILFGLAMDYEVFLMSRIHEEYSKTGDNDYS
                     IKVGLKESGPVIVAAALIMFSVFFAFVFQEDVMIKSMGMALAFGVLFDAFVVRMMLIP
                     ALTKLFGKGSWYLPAWLNRIIPRVDIEGHALEKYKTVESQESEAKDSKETYDTTFKVY
                     PQGATNVSKHQDAHGQDDAHSIVLDDKTMALYQEVKQQSASSLFLYDALIDYQNKHQL
                     NSKQQATNIEQLNKNIEKLNQLLEKNLRNKS"
     gene            11705..12253
                     /gene="farR"
                     /locus_tag="O7798_000792"
     CDS             11705..12253
                     /gene="farR"
                     /locus_tag="O7798_000792"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501323.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fatty acid efflux pump transcriptional regulator
                     FarR"
                     /protein_id="HDC2863063.1"
                     /translation="MKETDLRVIKTKKALSSSLLQLLEQQLFQTITVNQICDNALVHR
                     TTFYKHFYDKYDLLEYLFNQLTKDYFARDISDRLNHPFQTMSDTINNKEDLREIAEFQ
                     EEDAEFNKVLKNVCIKIMHNDIKNNRDRIDIDSDIPDNLIFYIYDSLIEGFIHWIKDE
                     KIDWPGEDIDNIFHRLINIKIK"
     gene            complement(12330..12497)
                     /locus_tag="O7798_000793"
                     /pseudo
     CDS             complement(12330..12497)
                     /locus_tag="O7798_000793"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501324.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            complement(12609..14153)
                     /gene="pruA"
                     /locus_tag="O7798_000794"
     CDS             complement(12609..14153)
                     /gene="pruA"
                     /locus_tag="O7798_000794"
                     /EC_number="1.2.1.88"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501325.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-glutamate gamma-semialdehyde dehydrogenase"
                     /protein_id="HDC2863064.1"
                     /translation="MVVEFKNEPGYDFSVQENVDMFKKALKDVEKELGQDIPLVINGE
                     KIFKDDKIKSINPADTSQVIANASKATKQDVEDAFKAANEAYKSWKTWSANDRAELML
                     RVSAIIRRRKAEIAAIMVYEAGKPWDEAVGDAAEGIDFIEYYARSMMDLAQGKPVLDR
                     EGEHNKYFYKSIGTGVTIPPWNFPFAIMAGTTLAPVVAGNTVLLKPAEDTPYIAYKLM
                     EILEEAGLPKGVVNFVPGDPKEIGDYLVDHKDTHFVTFTGSRATGTRIYERSAVVQEG
                     QNFLKRVIAEMGGKDAIVVDENIDTDMAAEAIVTSAFGFSGQKCSACSRAIVHKDVYD
                     EVLEKSIKLTKELTLGNTVDNTYMGPVINKKQFDKIKNYIEIGKEEGKLEQGGGTDDS
                     KGYFVEPTIISGLKSKDRIMQEEIFGPVVGFVKVNDFDEAIEVANDTDYGLTGAVITN
                     NREHWIKAVNEFDVGNLYLNRGCTSAVVGYHPFGGFKMSGTDAKTGSPDYLLHFLEQK
                     VVSEMF"
     gene            complement(14343..14942)
                     /locus_tag="O7798_000795"
     CDS             complement(14343..14942)
                     /locus_tag="O7798_000795"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501326.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sugar O-acetyltransferase"
                     /protein_id="HDC2863065.1"
                     /translation="MTEKEKMLAEKWYDANFDQYLINERARAKDICFELNHTRPSATN
                     KRKELIDQLFQTTTDNVSISIPFDTDYGWNVKLGKNVYVNTNCYFMDGGQITIGDNVF
                     IGPNCGFYTATHPLNFHHRNEGFEKAGPIHIGSNTWFGGHVAVLPGVTIGEGSVIGAG
                     SVVTKDIPPHSLAVGNPCKVVRKIDNDLPSETLNDETIK"
     gene            15181..15372
                     /gene="cwrA"
                     /locus_tag="O7798_000796"
     CDS             15181..15372
                     /gene="cwrA"
                     /locus_tag="O7798_000796"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501327.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell wall inhibition responsive protein CwrA"
                     /protein_id="HDC2863066.1"
                     /translation="MRILITGTVAILIILGLVKTIQDYEMTNDTSRQLSDNKDDDKVI
                     HLNNFKNLHAKEFNPSDFF"
     gene            15612..18020
                     /locus_tag="O7798_000797"
     CDS             15612..18020
                     /locus_tag="O7798_000797"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501328.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="copper-translocating P-type ATPase"
                     /protein_id="HDC2863067.1"
                     /translation="MANTKKTTLDITGMTCAACSNRIEKKLNKLDDVNAQVNLTTEKA
                     TVEYNPDQHDVQEFINTIQHLGYGVAVETVELDITGMTCAACSSRIEKVLNKMDGVQN
                     ATVNLTTEQAKVDYYPEETDADKLVTRIQKLGYDASIKDNNKDQTSRKAEALQHKLIK
                     LIISAVLSLPLLMLMFVHLFNMHIPALFTNPWFQFILATPVQFIIGWQFYVGAYKNLR
                     NGGANMDVLVAVGTSAAYFYSIYEMVRWLNGSTTQPHLYFETSAVLITLILFGKYLEA
                     RAKSQTTNALGELLSLQAKEARILKDGNEVMIPLNEVHVGDTLIVKPGEKIPVDGKII
                     KGMTAIDESMLTGESIPVEKNVDDTVIGSTMNKNGTITMTATKVGGDTALANIIKVVE
                     EAQSSKAPIQRLADIISGYFVPIVVGIALLTFIVWITLVTPGTFEPALVASISVLVIA
                     CPCALGLATPTSIMVGTGRAAENGILFKGGEFVERTHQIDTIVLDKTGTITNGRPVVT
                     DYHGDNQTLQLLATAEKDSEHPLAEAIVNYAKEKQLILTETTTFKAVPGHGIEATIDH
                     HHILVGNRKLMADNDISLPKHISDDLTHYERDGKTAMLIAVNYSLTGIIAVADTVKDH
                     AKDAIKQLHDMGIEVAMLTGDNKNTAQAIAKQVGIDTVIADILPEEKAAQIAKLQQQG
                     KKVAMVGDGVNDAPALVKADIGIAIGTGTEVAIEAADITILGGDLMLIPKAIYASKAT
                     IRNIRQNLFWAFGYNIAGIPIAALGLLAPWVAGAAMALSSVSVVTNALRLKKMRLEPR
                     RKDA"
     gene            18173..18379
                     /gene="copZ"
                     /locus_tag="O7798_000798"
     CDS             18173..18379
                     /gene="copZ"
                     /locus_tag="O7798_000798"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501329.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="copper chaperone CopZ"
                     /protein_id="HDC2863068.1"
                     /translation="MSQEILNVEGMSCGHCKSAVESALNNIDGVTSADVNLENGQVSV
                     QYDDSKVAVSQMKDAIEDQGYDVV"
     gene            complement(18469..19467)
                     /locus_tag="O7798_000799"
     CDS             complement(18469..19467)
                     /locus_tag="O7798_000799"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501330.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-lactate dehydrogenase"
                     /protein_id="HDC2863069.1"
                     /translation="MTKIKIMSVRDEDMPYIKAWAEKHHVEVDITKEALTDDNVEGVA
                     GYDGLSLSQQIPLSEHVYKRLNELGIKQIAQRSAGFDTYDLELANKYNFIVSNVPSYS
                     PNSIAEFAVNQAINVVRHFNQIQTKVREHDFRWEPTILSKSIKDLKVAVIGTGRIGRV
                     VADIFANGYQSDVVAYDPFPNAKIATYVDYKDTIEEAVEGADIVTLHVPATKYNHYLF
                     NAELFKHFKKGAVFVNCARGCLVDTKALLDALDNGVIKGAALDTYEFERKLFPSDQRG
                     KTLNDPLLESLIDREDVILTPHIAFYTEAAVKNLIVDALDATLDVLQTGDTRLRVN"
     gene            complement(19490..20644)
                     /locus_tag="O7798_000800"
     CDS             complement(19490..20644)
                     /locus_tag="O7798_000800"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501331.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class I/II-fold pyridoxal
                     phosphate-dependent enzyme"
                     /protein_id="HDC2863070.1"
                     /translation="MISNKLANIPDSYFGKTMGRKIEHGPLPLINMAVGIPDGPTPQG
                     IIDHFQKALTIPENQKYGAFHGKEAFKQAIVDFYQRQYNVTLNKEDEVCILYGTKNGL
                     VAVPTCVINPGDYVLLPDPGYTDYLAGVLLADGKPVPLNLEPPHYLPDWSKVDSQIID
                     KTKLIYLTYPNNPTGSTATKEVFDEAIAKFKGTDTKIVHDFAYGAFGFDAKNPSILAS
                     ENGKDVAIEIYSLSKGYNMSGFRVGFAVGNKDMIQALKKYQTHTNAGMFGALQDAAIY
                     ALNHYDDFLEEQSNVFKTRRDRFEAMLAKADLPFVHAKGGIYVWLETPPGYDSEQFEQ
                     FLVQEKSILVAPGKPFGENGNRYVRISLALDDQKLDEAAIRLTELAYLYE"
     gene            complement(21071..22579)
                     /locus_tag="O7798_000801"
     CDS             complement(21071..22579)
                     /locus_tag="O7798_000801"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501332.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)/FAD-dependent oxidoreductase"
                     /protein_id="HDC2863071.1"
                     /translation="MKIAVIGAGVTGLAAAARIASQGHEVTIFEKNNNVGGRMNQLKK
                     DGFTFDMGPTIVMMPDVYKDVFTACGKNYEDYIELRQLRYIYDVYFDHDDRITVPTDL
                     AELQQMLESIEPGSTHGFMSFLTDVYKKYEIARRYFLERTYRKPSDFYNMTSLVQGAK
                     LKTLNHADQLIEHYIDNEKIQKLLAFQTLYIGIDPKRGPSLYSIIPMIEMMFGVHFIK
                     GGMYGMAQGLAQLNKDLGVNIELNAEIEQIIIDPKFKRADAIKVNGDIRKFDKILCTA
                     DFPSVAESLMPDFAPIKKYPPHKIADLDYSCSAFLMYIGIDIDVTDQVRLHNVIFSDD
                     FRGNIEEIFEGRLSYDPSIYVYVPAVADKSLAPEGKTGIYVLMPTPELKTGSGIDWSD
                     EALTQQIKEIIYRKLATIEVFEDIKSHIVSETIFTPNDFEQTYHAKFGSAFGLMPTLA
                     QSNYYRPQNVSRDYKDLYFAGASTHPGAGVPIVLTSAKITVDEMIKDIERGV"
     gene            complement(22591..23454)
                     /locus_tag="O7798_000802"
     CDS             complement(22591..23454)
                     /locus_tag="O7798_000802"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501333.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phytoene/squalene synthase family protein"
                     /protein_id="HDC2863072.1"
                     /translation="MTMMDMNFKYCHKIMKKHSKSFSYAFDLLPEDQRKAVWAIYAVC
                     RKIDDSIDVYGDIQFLNQIKEDIQSIEKYPYEHHHFQSDRRIMMALQHVAQHKNIAFQ
                     SFYNLIDTVYKDQHFTMFETDAELFGYCYGVAGTVGEVLTPILSDHETHQTYDVARRL
                     GESLQLINILRDVGEDFDNERIYFSKQRLKQYEVDIAEVYQNGVNNHYIDLWEYYAAI
                     AEKDFQDVMDQIKVFSIEAQPIIELAARIYIEILDEVRQANYTLHERVFVDKRKKAKL
                     FHEINSKYHRI"
     gene            complement(23491..24618)
                     /gene="crtQ"
                     /locus_tag="O7798_000803"
     CDS             complement(23491..24618)
                     /gene="crtQ"
                     /locus_tag="O7798_000803"
                     /EC_number="2.4.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501334.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4,4'-diaponeurosporenoate glycosyltransferase"
                     /protein_id="HDC2863073.1"
                     /translation="MKWLSRILTVIVTMSMACGALIFNRRHQLKAKTLNFNHKALTII
                     IPARNEEKRIGHLLHSIIQQQVPVDVIVMNDGSTDETARVARSYGATVVDVVDDTDGK
                     WYGKSHACYQGVTHACTNRIAFVDADVTFLRKDAVETLINQYQLQGEKGLLSVQPYHI
                     TKRFYEGFSAIFNLMTVVGMNVFSTLDDGRTNQHAFGPVTLTNKEDYYATGGHKSANR
                     HIIEGFALGSAYTSQSLPVTVYEGFPFVAFRMYQEGFQSLQEGWTKHLSTGAGGTKPK
                     IMTAIVLWLFGSIASILGLCLSLKYRQMSVRKMVALYLSYTTQFIYLHRRVGQFSNLL
                     MVCHPLLFMFFTKIFIQSWKQTHRYGVVEWKGRQYSISKEQ"
     gene            complement(24624..26117)
                     /locus_tag="O7798_000804"
     CDS             complement(24624..26117)
                     /locus_tag="O7798_000804"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501335.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)/FAD-dependent oxidoreductase"
                     /protein_id="HDC2863074.1"
                     /translation="MTKHIIVIGGGLGGISAAIRMAQSGYSVSLYEQNNHIGGKVNRH
                     ESDGFGFDLGPSILTMPYIFEKLFEYSKKQMSDYVTIKRLPHQWRSFFPDGTTIDLYE
                     GIKETGQHNAILSKQDIEELQNYLNYTRRIDRITEKGYFNYGLDTLSQIIKFHGPLNA
                     LINYDYVHTMQQAIDKRISNPYLRQMLGYFIKYVGSSSYDAPAVLSMLFHMQQEQGLW
                     YVEGGIHHLANALEKLAREEGVTIHTGARVDNIKTYQRRVTGVRLDTGEFVKADYIIS
                     NMEVIPTYKYLIHLDTQRLNKLEREFEPASSGYVMHLGVACQYPQLAHHNFFFTENAY
                     LNYQQVFHEKVLPDDPTIYLVNTNKTDHTQAPVGYENIKVLPHIPYIQDQPFTTEDYA
                     KFRDKILDKLEKMGLTDLRKHIIYEDVWTPEDIEKNYRSNRGAIYGVVADKKKNKGFK
                     FPKESQYFENLYFVGGSVNPGGGMPMVTLSGQQVADKINAREAKNRK"
     gene            complement(26110..>26513)
                     /gene="crtO"
                     /locus_tag="O7798_000805"
     CDS             complement(26110..>26513)
                     /gene="crtO"
                     /locus_tag="O7798_000805"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501336.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="glycosyl-4,4'-diaponeurosporenoate
                     acyltransferase"
                     /protein_id="HDC2863075.1"
                     /translation="PDKYFRQKYIIFKSFNFEKHGKFWNKWFYVRKWKHKILDGHQLN
                     QNIYDQRHLMTINTDEIEKMIIETKRAELIHWISILPVIIFNKGPRLVKYINIFYAMI
                     ANVPIIIVQRYNRPRLTQLLRILKRRGERHD"
BASE COUNT         8520 a         5077 c         4141 g         8775 t
ORIGIN      
        1 ttacttcttt ttaacgctag tggaataatt aataataatt gtatttaaat gcaatgctgt
       61 tgttctttca tacttacaag caagtcataa gaaatgagaa attaaattct tatatgatga
      121 ataaatgatg actgcagaag aaattgctaa aaaaggagtg gagtgaggca ttctactgtt
      181 catattgtta acaaatatca aaatgatagg aacttgaaga atctaagact gttaaaatcg
      241 agacaagaag aaactcgttc caaatttgaa tcctataatg aattcgtctc atgaagaagt
      301 tatttacttt tcattagact gatttactaa tcaaaaaact tctatcacga acgcttcaat
      361 ttcctgtatg cgtgtgatag aagtttttat ttttgttcat attaatttat ctaagcgcta
      421 cgatggactg acttaaactt ttctttaaaa tcgctattcg ccatttacta ttgttgtcta
      481 atttcttgta aaatatgttc cgctgcttgt gtatttgcac ggggttcttt tttcaaagct
      541 tcagctactt tagcaatttc atcacctttt gcccctacaa cgatagctaa tgatttatat
      601 tgtaaactca tatgaccttg ttgaatacct tctgacacaa gcgcgcgaca tgctgcaaag
      661 ttttgcgcta aaccaacggc agcaactaca tgacctaatt cttgtgctga ctctacattt
      721 agtagctcta atgaagcttt agcaattggt aatacttttg taccaccgcc aacgattgcc
      781 aatgtcatag gcacttcaat tgtaccaatc aatcgttgac gatcttgatc gtaacgccat
      841 gtagcaatac cacgatactg tccgtcacga ctcgcgtatg catgcgcact tgcttctgca
      901 ccacgcgtat catttcctgt tgctaaaaca acagcatgta tgccattcat aacaccttta
      961 ttatgtgttg ctgcacgatg aatatctact tgggccaata cagaagcacg ttccattcgt
     1021 ttggcaacct cttctccagt tctctcgccc cttgctaaat ctttaacatc aatttcgcct
     1081 tgaactttaa caacggacgc tgttgcatga ttggataaaa tactcattaa aatgtcgctt
     1141 tgcggaaatt cattttttaa aaatgcagtt atggcctcta aaatcgtatt aagcatatta
     1201 gcgcccatag catctttcgt atcaacaaat acttttaaag atagtaactg ttgctcagga
     1261 aatgtatcaa tcgctatacg ttggtaacca ccaccacgcg ctttaataga aggatatgcc
     1321 tcatccgcaa ttttatgaat ttgcttttct aaagctttaa tgtctgctga taatttttca
     1381 gtatcgtcaa cgccatcaaa gacgatttga cctatcataa tacgttcaga agataccgtt
     1441 ttaaatccgc cagtctgatt cactagcttt gcaccataac tagctgcagc gacaactgaa
     1501 ggctcttcca ccatcatagg tacaacatat gccttatcgt ccacaatgat attcggtaat
     1561 aatccaacgg gtaatgcacc ttgcgcgatg acattttcaa ttaaactatt ggctacttct
     1621 tcatcgatta atggatgatt cagtaaaatg tcgaattgtt cttctgataa ccattgctta
     1681 tcaaccaatt gttgtaactt ttctttacga gataaatgtc gaaaattctt atctaaattt
     1741 tgcatggacg tactcctttt acttcacata atttttaaca tttcaatcac tactattttt
     1801 accacaaaat aacgtcattc gtcttaaaat tcaattgaat aattgtcgtt ttgactttaa
     1861 aataaaacaa ggtaaattaa aacgcttaca agaaacgaca aatcattttt aaatttagta
     1921 tatttctttg tataaaatta gcatattctg atatgataca agtgttgctt ttataaattt
     1981 gaaaggatgt aaaaccttat gacaataggt atcgataaaa taaactttta cgttccaaag
     2041 tactatgtag acatggctaa attagcagaa gcacgccaag tagacccaaa caaattttta
     2101 attggaattg gtcaaactga aatggctgtt agtcctgtaa accaagacat cgtttcaatg
     2161 ggcgctaacg ctgctaagga cattataaca gacgaagaca aaaagaaaat tggtatggta
     2221 attgtggcaa ctgaatcagc agttgatgct gctaaagcag ccgctgttca aattcacaac
     2281 ttattaggta ttcaaccttt tgcacgctgc tttgaaatga aagaagcttg ttatgctgca
     2341 acaccagcaa ttcaattagc taaagattat ttagcaacta gaccgaatga aaaagtatta
     2401 gttattgcta cagatacagc acgttatgga ttgaattcag gcggcgagcc aacacaaggt
     2461 gctggcgcag ttgcgatggt tattgcacat aatccaagca ttttggcatt aaatgaagat
     2521 gctgttgctt acactgaaga cgtttatgat ttctggcgtc caactggaca taaatatcca
     2581 ttagttgatg gtgcattatc taaagatgct tatatccgct cattccaaca aagctggaat
     2641 gaatacgcaa aacgtcaagg taagtcgcta gctgacttcg catctctatg cttccatgtt
     2701 ccatttacaa aaatgggtaa aaaggcatta gagtcaatca ttgataacgc tgatgaaaca
     2761 actcaagagc gtttacgttc aggatatgaa gatgctgtag attataaccg ttatgtcggt
     2821 aatatttata ctggatcatt atatttaagc ctaatatcat tacttgaaaa tcgagattta
     2881 caagctggtg aaacaatcgg tttattcagt tatggctcag gttcagttgg tgaattttat
     2941 agtgcgacat tagttgaagg ctacaaagat catttagatc aagctgcaca taaagcatta
     3001 ttaaataacc gtactgaagt atctgttgat gcatatgaaa cattcttcaa acgttttgat
     3061 gacgttgaat ttgacgaaga acaagatgct gttcatgaag atcgtcatat tttctactta
     3121 tcaaatattg aaaataacgt tcgtgaatat cacagaccag agtagtcggt gtatttaaaa
     3181 cacatataat aaaacctaaa agcagcagta agaccacttc taattgaaat cgtcttactg
     3241 ctgttctcta tttataacac ttcgtattga atgaattcat tatgcctatt tgacacatta
     3301 ttgaagtttt cctaatgcct ggatccttta tacgttacgg cttcgtgcta tgttttggta
     3361 cataaagctt tgacatatcg atattctcca actctaacag cttaatttta ttattaatcg
     3421 ttccaccgaa ccctgttaag ctacccgttt taccgacaac acgatgacat ggcacgataa
     3481 tagataatgg attacttccg actgcacctc caaccgcttg ggctgacatt tttggcttgt
     3541 taagcagctt gcctactttt ttggcaatag caccatacgt tgttagagtc ccataaggaa
     3601 cctgtcttaa ttcattccaa acacactgtt gaaaatgact acctgttggc tttaaaggta
     3661 ttgtgatttc aggattgtca cctttaaaat acgcgtctaa ccactgtgtc gcctctctaa
     3721 atatcgctaa agacgtattt tcttccctag taccatcacc ttgttgattt tcaaacaaaa
     3781 cagcggtcag acttacccca tcactcaaaa gttccaatcg tcctacaggc gaatcatagt
     3841 aactcttata ctccataaaa attccccctt tttctaatca tacgccttaa ttgttaaatt
     3901 agaaaatatt catgttcaca ttttttaaaa ataaataagt cgtcaattac gtatataaac
     3961 acgtaatacc agctatcact ttgctgcaat atacagttac atatcttact acacgtgcta
     4021 acctcttact ttgtaaacca aatcttaaat taaaatattg aaaatgcaat gaatccttaa
     4081 tattttatta aacctataat tacttattaa aaataacaca caatattcat aaagttttaa
     4141 aaatattctg ttttatcacc tactattagt ggaaaagtac aattgcaatt gtatatagtt
     4201 tgcataacgc ttcaaaagta atttcttttt tgtttagttc aaaaaaattt agaggtgatg
     4261 ttatatgaat aacggttttt tcaatagcga ctttgattca atttttcgaa gaatgatgca
     4321 agatatgcaa ggttcaaatc aagtcggaaa caaaaagtac tatattaatg gtaaagaagt
     4381 ttcacctgaa gaactagcgc aactcacaca acaaggtggc aatcactctg ctgaacaaag
     4441 tgcgcaagct tttcaacaag cagcacaaag acaacaaggg caacaaggtg gcaacggcaa
     4501 ttatttagaa caaattggtc gtaaccttac gcaagaagca cgtgacggtt tattagatcc
     4561 agtcattggt cgtgataaag aaattcaaga aactgctgaa gttttaagta gacgaactaa
     4621 aaacaatcct atattagttg gagaagctgg tgttggtaaa actgcgattg ttgaaggttt
     4681 agcacaagca atcgttgaag gaaatgtacc agcagcaatc aaagacaaag aaattatttc
     4741 tgtagacatt tcatcattag aagctggaac gcaatatcgt ggtgcttttg aagaaaatat
     4801 tcaaaaatta atcgaaggtg ttaaatcttc acaaaatgcc gtactattct ttgatgaaat
     4861 ccatcaaatt atcggttcag gtgccacagg aagtgattca ggtagcaaag ggttatctga
     4921 tattttgaaa cctgcattaa gtcgtggtga gatttctatt attggtgcaa caacacaaga
     4981 tgaatatcga aacaatattc ttaaagatgc tgcattaacg cgcagattta atgaagtgct
     5041 tgttaatgaa ccaagcgcta aagatactgt tgaaatttta aaaggtattc gcgaaaaatt
     5101 cgaagaacac catcaagtaa aattaccaga tgacgtatta aaagcatgtg ttgacttatc
     5161 aattcaatat attccacaac gattattacc agataaagca atcgatgtgt tagatattac
     5221 agcagcacat ttatctgcgc aaagtccagc tgtcgataaa gttgaaactg aaaaacgaat
     5281 ttctgaatta gaaaatgata aacgtaaagc agtaagtgct gaagaatata aaaaagctga
     5341 cgacattcaa aatgaaatca aatcattaca agataaatta gaaaatagta atggtgaaca
     5401 tactgctgtt gctacagttc atgatatttc agatactatt caacgattaa ctggtattcc
     5461 agtttctcaa atggatgata acgatattga acgtttaaaa aatatttcta atcgtttaag
     5521 aagtaaaatc ataggtcaag atcaagctgt agaaatggtt tcacgtgcaa ttcgccgtaa
     5581 tcgtgctggg tttgatgacg gcaaccgtcc aattggcagt ttcctatttg ttggccctac
     5641 tggtgttggt aaaacagagc ttgctaaaca attagcaatt gatttatttg gtaataaaga
     5701 tgcactgatt cgacttgata tgagtgaata tagtgacaca acagctgttt caaaaatgat
     5761 tggtacaact gctggttatg ttggttatga tgacaattca aatacgttaa ctgaaaaagt
     5821 acgccgtaat ccatactcag tcattctatt tgatgaaatc gaaaaagcaa atccacaaat
     5881 tttaacattg ttattacaag taatggatga tggtaatttg actgatggtc aaggtaatgt
     5941 catcaacttt aaaaatacaa ttattatttg tacatcaaat gctggctttg gcaatggcaa
     6001 tgacgctgaa gaaaaagata ttatgcacga aatgaaaaaa ttcttccgcc ctgaattcct
     6061 taaccgcttc aacggcatcg ttgaattctt acatttagat aaagatgcat tgcaagatat
     6121 cgtcaactta ttattagacg atgtacaagt tacattagac aaaaaaggta ttacgatgga
     6181 cgtttctcaa gatgcgaaag attggttaat tgaagaaggc tatgatgaag aattaggtgc
     6241 acgtccatta agacgtattg ttgaacagca agtacgtgac aaaattacag attactattt
     6301 agatcataca gacgttaaac atgtggatat agatgttgag gataacgaat tagtcgtaaa
     6361 aggtaaataa cgacacttta acatatcgcg catcaaaaat gagcatcagg tcgcccttgc
     6421 ctgtgctcat ttttttaatt atttccctgg aaaatgattc gctgtgtgct gttctgttcc
     6481 acaacaatca cgattaatgt cacatgtacc acattttcct tgttttgaac gcttgaaaaa
     6541 ttttactagt gtatataagg catatccgaa aattgctaaa aaaattaaaa tgttaataat
     6601 gactgacact ttaaccactc cttaaacaaa taaatgtccg acttgataaa aaatgaatgt
     6661 taagacatat gcagtgacta gaggataggc aactgcaagt gccgtccatt tccatgaata
     6721 agtctcttta cggattgctg ctactgtaga aacacaagga atatacaata gtataaatat
     6781 cataaatgca tacgcagata gcggtgtgaa ttgattttga atcacattaa caaggcctgc
     6841 atcacctgat gaatagataa tcgccatcga acttacgata acttcttttg ctaaaaatcc
     6901 tggcactaac gtagcacctg cttgccatgt tccaaatccg agcggttgca ctaacatacc
     6961 aaagaaacta ccaaccatat gtaaaaaact ttgattgata ttcacattga taccatgtgg
     7021 tcctacataa cttaatagcc aaatgactac tgagccgcca aaaataaatg tacctgcttt
     7081 acgaacaaag cccttagcct tttcccaagt actacgccac aacgttttaa tggaaggcac
     7141 acggtatgtt ggcaattcca caataaagat tgcattatca ttttttaaaa tcgtcttagt
     7201 aagtactgta ctgactaaaa atgccataat aatacctaaa acatacaggc ttaatactac
     7261 taaagattga ttctctttga aaaagatacc tacgaacaac gcatacactg gcagtctagc
     7321 agagcatgac atgaatggtg caattaatat cgttgttaaa cgctcttttt cattttcaat
     7381 actgcgcgca gccataatac tcggtacatt acaaccaaat ccgataatca ttggtataaa
     7441 agacttcccg cttaaaccga acgattccat aatacgatcc attaaaaccg caatacgtgc
     7501 catataaccc gaatcttcta ataaagatat aaagaaaaag agcacaacaa tttgtggtac
     7561 aaagactaat actgatccta caccagcaat aatgccatct gtaattaaat cttgtaaaaa
     7621 tggtataaca ccaagataat tcataatcgt cttcacacta tctgtaaatg taccacctat
     7681 aaatgcatcg agttgatccg acaaaggtgt gccaatccat gtaaatgtag tttgaaagat
     7741 caaccacata attgctagaa agataggcat ccctatatat ttatgtgtta atatcttgtc
     7801 tattctagag ctgaaatatt gcttatcttc atctggatac gttaccacgt cttgcaataa
     7861 cgtctcaata taatgattgc gtatacgctc catctctcga cgaacagata cagcccctac
     7921 ttgttcagca acttgatcac gtaaactcga caatttattt acaacctctg aattaagttc
     7981 gtttgcaatt tgcatgttat ttaataagaa ttgaatcgca ataaacctag cttgatactt
     8041 atcatgagat gtctctgtca ttattatttg acacatattt ttaattgtct cttcaatctt
     8101 ctcaccataa ttgattttaa aatgcggttg atacccttcc cctagatgct ttatttcgcc
     8161 aagtaaatat tttgttcctt tgcctgtacg tgccacaact ggaaaaatag gtgtttttaa
     8221 ctttttcatc aatttatgat aatcgatttt tatcccgcgc tttgtagcta catcaatcat
     8281 atttaatccg atgtatattg gttgattaag ttctaacaat tgtactgtta attgcatatt
     8341 tctttttagt tgactcgcat caacaatgtt aatgattcct gaaaatgaat cgtttaataa
     8401 atagtctgtc actacagttt catctttaga aatcggcgat aaatcatatg tacctggtaa
     8461 atcaattaat tgtcctacat tttctttaag tttccctact tttttctcta ccgttacgcc
     8521 actccagttg cctatatatt catacgaacc agttaaagcg ttaaacaaag atgttttacc
     8581 aacattagga tttcctaaaa tacaataatt ttccattcgt ccggctccta ttcttctaat
     8641 gcaatagaac aagcatcgca atgtctaata cttaactgtt gtccgtttac ttcaataata
     8701 catggccctt taaataaaca tttttgttta atcgttatga tagcgtcatc tgttaaccca
     8761 aaggcactta gacgatacaa catattctca ttagcaatat ccattcgctt tattttataa
     8821 gccttattca tttcaccatt tttaatgttt aacatactat ttcgctctcc tattagaaat
     8881 aataatcatt atcacttaaa aatcataacc cttaaaattg tagctcgcaa tactttattt
     8941 aaataatttt catttttcat gtaaaatttg tgacattgca aaaatgtttt gtataatcac
     9001 ttccatgcaa aaaacctccg cttcaaatgt cattgataga catttaaagc ggaggcatgt
     9061 acatgttatt ttatgattta tttcgtagat ttttttctaa caattgattg agcttttcaa
     9121 tatttttatt caactgttct atattcgttg cttgttgttt tgaatttagt tgatgcttgt
     9181 tttgataatc tattaaagca tcatataaga acaatgaact tgctgattgc tgtttcactt
     9241 cttggtacaa tgccatcgtt ttatcatcta gtactattga atgtgcatca tcttgcccat
     9301 gtgcatcttg atgtttcgat acatttgttg caccttgtgg atatacttta aaggttgtgt
     9361 cgtatgtttc cttactatct ttagcttcag attcctgtga ttcaaccgtt ttatattttt
     9421 caagtgcatg tccttcaata tcaactcgtg gaataatgcg attcaaccat gctggtaaat
     9481 accacgaacc ttttccaaac aatttcgtta atgcaggaat taacatcatt ctgactacga
     9541 aggcatcaaa gagtacacca aacgctaatg ccatacccat tgatttaatc atgacatctt
     9601 cttggaatac aaacgcaaag aagacactaa acataattaa tgcagctgct acaataacag
     9661 gaccgctttc tttcaatcct actttgatag aataatcatt atcccctgtt ttactatatt
     9721 cttcatgaat tcgcgacata aggaagactt cataatccat cgctaatcca aataagatac
     9781 ctatagtaat aaccggtaaa aatgctagca ttggtcctgt cgtttcaata ccaaacagac
     9841 ctttcataaa accatcttgc attactaatg ttgtaaatcc taatgttgcc attaatgaca
     9901 agacgaatcc taaaactgct tttaatggta ttagaattga acggaagaca atcattaata
     9961 agaaaaatgc taatacaaca atgactgagg caaataaagg tatcgcctca tttaactttt
    10021 tagacatatc aatattaatg acactttgtc ccgaaatctc cgttttgaac ccatatttat
    10081 cttgtgcatc tttatgataa tctcgtaaat catgcactaa atcatttgta ctctctgcat
    10141 taggcccttg cttaggtatc acgaccatca aagcgtaatc attatcttta ctcatttgtg
    10201 gtggcgtaac gatatctaca tttttcttat ctttaatatc tttatataca gactgtaaat
    10261 cttgttgtaa tccttgtgga tcatcctttt tatctttcac atttatcaac atcggtattt
    10321 ggccattaaa tccttcacca aatttatccg agataatatc gtaagctttt ttctgtgtag
    10381 aatctgctgg tttaacaccg tcatctggaa taccaagtcg catatgacta actggtattg
    10441 cagctgctac taatatgatt aaacctagta atactgccgc aagtgcattt cctgtaataa
    10501 atttagacca tggcgtatca atatcttttt tgaatttaga ctgtaattta ttcactttaa
    10561 tgcgtttatg gaaaatgctt attaatgcag gtaataaagt taaagcgcta agtactgcaa
    10621 aaacaacact aattgccgaa gcaaatccca ttaccgctaa gaagtcaatg cctactaatg
    10681 ataaaccaca tactgcaatt acaactgtta caccagcaaa aacaactgca ctacctgctg
    10741 ttcctattgc aagaccaatg cctttaatgt aatctgtttc agttttcata acttgtcgat
    10801 atctgaataa aataaataat gcataatcga taccaactgc tagtccaatc attacggcta
    10861 atgtcagtgt gacatttggt atatcgaatg cataagttaa caaactgata atacctacac
    10921 cagaggctag accaatcaat gcacttataa ttggtaatcc tgcagcaatg actgaaccga
    10981 atgtgattaa cagtacaaca aatgcaacaa taataccaac tagttcagaa ttaccgccta
    11041 cttctgtaga tgtcattcct gtaccagtta actctgtttg tacattatga ttgtcacgta
    11101 agtctttcaa atgactttta acattatctc tagagccatc ttttaaagat gtttgactaa
    11161 cgtcatatgt gatatctgca aatgcagttg ttttatcttt actaatttgc ttattttcat
    11221 aaggatctga tattttatca atgtgcttgt catctttttt aatatcatct aacgttttct
    11281 taatatcttt agtaatgttc ggttgcacaa taccatcatc tttagtcgtc ttaaagacaa
    11341 cacgtatttg tgccttttca ctatcttgat taaaatgttt ttcaatcttt ttattcgtat
    11401 ctaacgactc taatcctgtc attttaatat cattgtcaaa tttcggtgca tttgtagcaa
    11461 gtggtatcaa tattgcagct acaatcacta tccatgcaat gaccgcggac catttatgtt
    11521 ttgcgatgaa tgtccccatc ttatataaaa attttgccaa agtatattgc ctccttttaa
    11581 aatcaacgtt atagtttaaa tatacagtgt agattattgt tcgattatag tatctatccc
    11641 cgacctctta aagaatcaat tggaaaattt tgtatattaa actacacaca aaggagaaat
    11701 gtagatgaaa gagactgatt tacgagttat aaagacaaaa aaagcattgt cgagtagctt
    11761 gctacaattg ttagaacagc aattattcca aacgattact gtcaatcaaa tttgcgacaa
    11821 cgcactcgta caccgtacaa cattttataa acatttttat gataaatatg atcttctaga
    11881 gtacttgttc aatcaattga ctaaagacta ctttgctaga gatatcagtg accgtcttaa
    11941 tcatccattc caaacgatga gtgatacgat taataataaa gaggatttga gagaaatcgc
    12001 agaattccaa gaagaagacg ctgaatttaa taaagtatta aaaaatgtct gcattaaaat
    12061 tatgcataac gatatcaaaa ataatagaga ccgtatcgat attgacagcg acatcccaga
    12121 taatctcata ttttatattt atgactcgtt gattgaaggt tttatacatt ggataaaaga
    12181 tgaaaaaatt gattggcctg gcgaagatat tgataacatt ttccatagat taatcaatat
    12241 taagattaaa tagtagatga gaaactcatg agcgttacca acattcataa taaaaacgat
    12301 agtgtacacg ttaatgaatt cgtgtactac tatcgttttt tatttttatc gtgcttatcg
    12361 ctattaaaac aactgataca caacacataa actatgaaga aaaaaataaa tccgctatct
    12421 aaatgacttt aactcagttg tttaaatgac caaattgcta atacaattcc cattattatt
    12481 gaaataacgt atctcacatt cttataccta taatcctttt ctaaaaatat ggttgctatt
    12541 acttaatttt taaagttata aataaaaaga gccaaccgca atggatggcc cttgttcatt
    12601 atgaagcatt agaacatttc tgaaacaacc ttttgttcta agaagtgtaa taagtagtct
    12661 ggactacctg ttttagcgtc cgtacctgac attttgaaac caccaaatgg atggtatcca
    12721 acaactgctg aagtacagcc tctgttaagg tataaattgc ctacatcaaa ttcgtttacc
    12781 gctttaatcc aatgctcgcg attatttgta atcactgcac cagttaaacc gtaatctgta
    12841 tcatttgcaa cctcaattgc ttcatcaaaa tcgttaactt tcacaaagcc aacaactgga
    12901 ccaaaaattt cttcttgcat gattctatct ttagatttaa gtcctgaaat gattgttggt
    12961 tctacaaagt aaccttttga atcatcagtg ccgccacctt gttctaattt accttcttct
    13021 ttaccaatct caatataatt tttaatctta tcaaattgtt ttttattaat aactgggccc
    13081 atatacgtat tgtctacagt attgcccaac gttaattctt ttgttaattt gattgatttc
    13141 tctaatactt cgtcataaac gtctttatgc acaattgcac gtgaacatgc tgaacatttt
    13201 tgaccagaaa aaccaaatgc tgacgttaca atagcttctg ctgccatatc tgtatcaata
    13261 ttttcatcaa ctacaatggc atctttacca cccatttcag cgataacacg tttcaagaag
    13321 ttttgacctt cttgaacaac ggcactacgt tcataaattc tagtacctgt cgcacgtgat
    13381 cctgtaaatg taacgaaatg cgtatcttta tgatcaacta agtaatcacc aatttctttc
    13441 ggatcaccag gaacaaagtt aactacgcct tttggtaatc ctgcttcttc taaaatttcc
    13501 attaatttat aagcgatata aggtgtatcc tcagcaggtt tcaataacac tgtattacct
    13561 gccacaactg gtgctaaagt tgtaccagcc ataatcgcaa acgggaagtt ccacggcgga
    13621 attgtaacac ctgtaccaat tgatttatag aaatatttat tgtgttcacc ttcacgatca
    13681 agtactggct taccttgagc caagtccatc attgaacgtg catagtattc aataaaatca
    13741 ataccttcag ctgcatcacc aactgcttca tcccatggct tacctgcttc ataaaccata
    13801 attgctgcaa tttccgcttt tcgacgacga ataattgccg aaacacgtaa cataagctct
    13861 gcacgatcat ttgctgacca tgttttccaa gatttataag cttcgtttgc tgctttaaac
    13921 gcatcttcaa catcttgttt tgttgccttt gatgcatttg caatcacttg tgatgtgtct
    13981 gcaggattga ttgatttaat tttgtcatct ttgaaaatct tctctccatt aatcactaat
    14041 ggtatgtctt gacctaattc tttttccacg tctttcaatg ctttcttaaa catatccaca
    14101 ttttcttgga ctgaaaaatc gtaaccaggt tcatttttaa attctactac catgtacact
    14161 taccccctat aaattttgaa agtggtttaa ccctttgatt taatgatata acatcattta
    14221 aactcatttt actatgatta aggttagttt tgcaaccgct ttcattttta tgttttatca
    14281 cttattctca agtattttga aattgattgg ttacttttta aaatttatat gggtcgcaac
    14341 tgctacttta tcgtttcgtc atttaatgtt tcggatggta ggtcattatc aattttacga
    14401 acgactttac aagggtttcc aaccgctaag ctgtgtggcg gaatatcttt agtgacaaca
    14461 ctaccagcac caatcacact gccttctcca atcgtcaccc ctggtaacac ggctacatga
    14521 ccgccaaacc aagtattact gccaatatga atgggtccgg ctttttcaaa accttcattt
    14581 ctatgatgga aattaagtgg atgtgtcgct gtgtagaatc cacaattagg tcctataaaa
    14641 acattatcgc caattgtaat ctgtccacca tccataaagt aacaattggt gtttacatag
    14701 acattttttc ctagtttaac gttccaacca taatctgtat caaaaggaat cgaaatactt
    14761 acattgtctg ttgttgtttg aaataattga tcaattaatt cctttctttt atttgtagca
    14821 ctcggtcttg tatgatttaa ttcaaagcaa atatctttcg ctcgtgcacg ttcattgatt
    14881 aagtattgat caaagtttgc atcgtaccat ttttctgcta acattttttc tttttcagtc
    14941 attacacctt tcaactccta ataacttatt tacttgttta aaagttaatc aaataaacct
    15001 tcgcctatgc aactaatacg ctataacatt atgaaatcat gaccttatca cccttatcta
    15061 tacaattctc gcatcaaata ctgctaaagt agtagataaa ttcaatacta cagacgcatt
    15121 cattttttaa tctattaacg tacaatgtga gtaagagaaa tataaaggag tatgatagcg
    15181 atgagaatat taattacagg cacagttgct atcttaatca ttctaggttt ggtcaaaacg
    15241 atacaagatt acgaaatgac aaacgacacg agtcgtcagt tgtcagacaa caaagatgat
    15301 gataaagtca tccatcttaa taattttaaa aatttacatg cgaaagaatt taacccatct
    15361 gatttctttt aagtcaccta agaattgcaa atccagaagt catttaagtt ttacctttca
    15421 ttcatacatc ctttaatatt aattacgact tcttttatat agatgctaag tagagagatt
    15481 gttgtgcaat gtttgcacgg caatctctct ttttcttttt aaaattggta aaagtaaaac
    15541 gcaacgattg acttatatac ctataggggg tacattggac gtgtaacaat gaatcacagg
    15601 gaggcaataa tgtggctaat acgaaaaaaa caacattaga tatcactggt atgacttgtg
    15661 ccgcatgttc aaatcgtatc gaaaagaaac tgaataaact tgatgacgtt aatgcccaag
    15721 tgaatttaac tacagagaaa gcaactgttg agtataaccc tgatcaacat gatgtccaag
    15781 aatttattaa tacgattcaa catttaggtt acggtgtcgc tgtagaaact gtcgaattag
    15841 acattacagg tatgacttgt gctgcatgct caagccgtat tgaaaaagtg ttaaataaaa
    15901 tggacggcgt tcaaaatgca acggtcaatt taacaacaga gcaagctaaa gttgactatt
    15961 atcctgaaga aacagatgct gataaacttg tcactcgcat tcaaaaatta ggttatgacg
    16021 cgtctattaa agataacaat aaagatcaaa cgtcacgcaa agctgaagcg ctacaacata
    16081 aattgattaa gcttatcata tcagcagtat tatctttacc actattaatg ttaatgtttg
    16141 tacatctttt caatatgcat ataccagcac tatttacgaa tccatggttc caatttattt
    16201 tagctacacc tgtacaattt attattggat ggcaatttta tgtaggtgct tataaaaact
    16261 taagaaatgg tggcgccaat atggatgtac ttgttgctgt tggtacaagt gcagcatatt
    16321 tttacagtat ttatgaaatg gttcgttggc taaatggctc aacaacgcaa ccgcatttat
    16381 actttgaaac aagcgccgta ctaattacct taatcttatt cggtaagtat ttagaagcta
    16441 gagcgaagtc tcaaacaacc aatgcgcttg gcgaattatt aagtttacaa gctaaagaag
    16501 cacgcatttt aaaagatggt aatgaagtga tgattcctct aaatgaagta catgttggag
    16561 atacacttat cgttaaacca ggtgaaaaga tacctgttga tggcaaaatt attaaaggta
    16621 tgactgccat cgacgaatct atgttaacag gtgaatctat ccctgttgag aagaatgttg
    16681 atgatactgt aattggttca acgatgaaca aaaacggtac tattactatg acagcaacaa
    16741 aagttggcgg ggacactgcg ttggcaaata ttattaaagt tgtcgaagaa gctcaaagtt
    16801 ctaaagcgcc gattcaacga ttggcagata ttatttctgg ttatttcgtt cctatcgttg
    16861 ttggtatcgc actattaaca tttatcgtgt ggattacttt agttacacca ggtacatttg
    16921 aacctgcact tgttgcgagt atttccgttc tcgtcattgc ttgtccatgc gcattgggac
    16981 ttgctacacc aacttctatt atggtaggta ctggtcgcgc tgctgaaaat ggtattttat
    17041 ttaaaggtgg cgagtttgtt gaacgcacac atcaaattga taccatcgtt ttagataaga
    17101 cgggtaccat tacaaatggt cgtccagtcg tgacagatta tcatggtgac aatcaaacgc
    17161 tacaactact tgctactgct gaaaaagatt ctgaacaccc attggcagaa gccattgtca
    17221 attatgcaaa agaaaagcaa ttaatattaa ctgagacaac aacatttaaa gcagtacctg
    17281 gccatggtat tgaagcaacg attgatcatc accatatatt ggttggtaac cgtaaattaa
    17341 tggctgacaa tgatattagc ttgcctaagc atatttctga tgatttaaca cattatgaac
    17401 gagatggtaa aactgctatg ctcattgctg ttaattattc attaactggt atcatcgcag
    17461 tggcagatac tgtcaaagat catgccaaag atgctataaa acaattgcat gatatgggca
    17521 ttgaagttgc catgttaact ggcgataata aaaacactgc tcaagccatt gcaaaacaag
    17581 taggcataga tactgttatt gcagatattt taccagaaga aaaagctgca caaattgcga
    17641 aactacagca acaaggtaag aaggttgcga tggttggtga cggtgtaaat gatgcacctg
    17701 cattagttaa agctgatatc ggtatcgcca ttggtacagg tacagaagtt gccattgaag
    17761 cagctgatat tactattctt ggtggcgact tgatgcttat tcctaaagcc atttatgcaa
    17821 gtaaagcaac cattcgtaat attcgtcaaa atctattttg ggcattcggc tataatattg
    17881 ccggtatccc tatagctgca ttgggcttac ttgcgccatg ggttgctggt gctgcaatgg
    17941 cactaagttc agtaagtgtt gtcacaaacg cacttagatt gaaaaagatg cgattagaac
    18001 cacgccgtaa agatgcctag attccttaat aatgaaggat tcgttggtga ttctgagata
    18061 ggctagtgat tggctctata atgtcgcggt ttacagttgg atcttcgctc caactgcata
    18121 agagccacta attattataa ataataagtg gctctaaaag gaggtgaatg ctatgtcaca
    18181 agaaatttta aatgttgaag gtatgagctg tggtcactgc aaaagtgctg ttgaatctgc
    18241 attaaataat attgacggtg tcacttcagc tgacgttaac cttgaaaatg gtcaagtaag
    18301 tgttcaatat gatgacagta aagttgctgt atctcaaatg aaagacgcaa ttgaagatca
    18361 aggttacgat gtcgtttaat taggcaatat tcaacgtcat caacaccaaa ttaaaaaatc
    18421 gaactgatga gaatcccaac aatccaaatt atctcatcag ttcgattttt aatttactcg
    18481 taacctagta tctccagtct gcaatacatc taatgttgca tctaatgcat cgacaattag
    18541 atttttaact gcagcttcag tataaaacgc aatatgtggt gttaatatga catcttccct
    18601 gtcaatcaac gattctaaca atggatcgtt cagtgttttg cccctttgat cacttgggaa
    18661 aagtttgcgt tcaaattcat acgtatcaag tgctgcacct ttaatcacac cattgtctaa
    18721 tgcgtctaat aacgccttag tatctactaa acaacctctc gcacaattga caaatactgc
    18781 gcccttttta aaatgtttaa ataattcagc attaaataga taatgattat atttcgttgc
    18841 aggtacatgt aatgtcacga tatcagcacc ttcaaccgct tcctcaatcg tatctttgta
    18901 atcgacatac gttgcaattt tagcattagg aaacgggtcg tatgcgacca catcactttg
    18961 ataaccattg gcaaatatat cggctactac acggccaatt cgacctgtac caataacagc
    19021 tacttttaaa tctttaatgg atttcgataa aatagtaggt tcccatctaa aatcatgctc
    19081 ccgcactttc gtttgaattt gattaaaatg acgaaccaca ttaatagcct ggttcacagc
    19141 aaactccgca attgaattcg gagagtatga cggcacattt gacacaataa agttatactt
    19201 gtttgctaac tccaaatcat atgtatcaaa tccagcacta cgttgtgcga tttgtttaat
    19261 acctagttca tttaatcgtt tataaacatg ctctgataat ggtatttgtt gtgatagcga
    19321 taagccatca taaccagcga caccttcaac attgtcatca gttaatgctt ctttagtaat
    19381 atctacctca acatgatgtt tctctgccca cgccttgata taaggcatat cttcatcacg
    19441 tacactcatg attttaattt ttgtcatttt aacatcaccc ttaactttat tattcatata
    19501 aatatgctag ttctgttaat cttattgcag cttcgtctaa tttctggtca tctaacgcca
    19561 atgaaattct cacataacga ttaccattct ctccaaatgg tttccctgga gcaacaagta
    19621 ttgacttctc ttgcactaaa aattgctcaa attgctcgct gtcataacca ggcggtgttt
    19681 ccaaccatac atatatgcca cctttagcat gaacaaatgg caaatcagct tttgcaagca
    19741 tggcttcgaa tcggtcacga cgtgttttaa atacattgct ttgttcttct aaaaaatcat
    19801 cataatgatt caaagcatat attgcggcat cttgtaatgc accaaacatc ccagcatttg
    19861 tgtgcgtttg gtactttttc aaagcttgaa tcatatcttt attaccaact gcaaaaccga
    19921 ctctaaaacc tgacatgtta taacctttag acaaggaata aatttcaatc gcaacatctt
    19981 tcccattttc cgaagcaagt atactaggat ttttagcgtc gaaaccgaaa gcaccataag
    20041 caaaatcatg cacgatttta gtgtctgtac ctttaaattt agctatcgct tcatcaaaaa
    20101 cttctttcgt agctgtcgat ccagttggat tatttggata cgttaaataa atgagttttg
    20161 ttttatctat tatttgtgaa tcaactttgg accaatctgg caaataatgt ggcggttcta
    20221 aattaagcgg gactggcttg ccatcagcta aaagtacacc tgctaaataa tccgtgtagc
    20281 ctggatcagg tagtaataca tagtctcctg gattgataac acatgttggt actgccacta
    20341 atccattttt tgtaccatat aaaatgcata cttcatcttc tttatttaac gtcacattat
    20401 attgtctttg ataaaaatct acaatagctt gcttgaacgc ttctttacca tgaaaagcac
    20461 catatttttg attttcagga atagttagtg ctttttgaaa atgatcaata ataccttgtg
    20521 gcgtgggccc atcagggatt ccaactgcca tattaattaa tggcaatggt ccatgttcga
    20581 ttttacgtcc catcgttttc ccgaaataac tatcagggat atttgctaat ttgttagaga
    20641 tcatcaaatt cctcctctat cattaaacat agcctgggcg actatcataa tcctaacaac
    20701 ttgtatcact ctcatttaga tggttacaat gacatcgcca ttcaccgtta tgttcaacag
    20761 aacttatgac acacgttgta ttgaatgaat ttattttcat tttaggtagg tataatatta
    20821 ttgtcaatat taggaatttt cagattaata tgcactcaat cgttatgatt taactgtcat
    20881 gcatatccgc atgcgcaacc agttagatat gcttatataa agtataacgc ccatcaaggt
    20941 acgtattcaa acgtgaacct taacaggcgt cattcattgt taaataaaac ttcttaagca
    21001 catacttatt tcactatgcc ttttacgttc cccttatact tttctcacat ctttctctta
    21061 gactactccc ttatacgccc cgctcaatat ctttaatcat ttcatctaca gttattttcg
    21121 cactcgttaa gacaatagga acgcctgcac ctggatgcgt acttgcacct gcaaaatata
    21181 aatctttata atctcgcgat acattttgtg gacgataata attactttgc gctaaagttg
    21241 gcattaaacc gaatgccgaa ccaaatttcg catgatacgt ttgctcaaaa tcatttggcg
    21301 taaagattgt ttctgaaaca atatgcgatt ttatatcttc aaatacttca atcgttgcta
    21361 atttacgata aataatttcc tttatttgtt gcgtcaaagc ttcatctgac caatcgattc
    21421 cgctacctgt tttaagttcc ggcgtcggca ttagcacata aataccagtt ttgccttctg
    21481 gcgcaagtga tttatcagcg accgctggta catacacata aatagaagga tcatatgata
    21541 aacgtccctc aaatatttct tcaatattgc ctctaaagtc atctgaaaaa ataacattat
    21601 gaagtctcac ttgatctgtc acatcaatat ctataccgat atacattaaa aatgctgaac
    21661 aagagtaatc taagtctgca attttatgtg gtggatactt tttaataggt gcaaaatctg
    21721 gcattaatga ttccgcaaca ctagggaaat cagccgtaca taaaatttta tcaaattttc
    21781 ttatgtcacc attcactttt atcgcatcgg cccgtttgaa tttaggatca ataataattt
    21841 gctcaatttc agcatttagt tcaatattaa cgcctaagtc tttatttaat tgcgctagcc
    21901 cttgagccat gccatacata ccgcctttaa taaaatgcac accaaacatc atttcaatca
    21961 taggaataat tgaatatagt gacgggcctc gttttggatc aattcctatg tataacgttt
    22021 gaaacgctaa aagcttttgt atcttttcgt tatcaatata atgttcaatt agctgatctg
    22081 catgatttaa cgtttttaac ttagcacctt gcacaagtga cgtcatatta taaaagtcac
    22141 tcggtttgcg atacgttctt tctaagaaat agcgacgtgc aatttcatat tttttataaa
    22201 catccgttaa aaaggacata aaaccatgcg ttgaaccagg ttctatactt tctagcattt
    22261 gctgtaattc agctaaatct gtaggcaccg ttatacgatc atcgtggtca aaatacacat
    22321 cgtaaatata acgtaattgt ctcaattcaa tataatcttc ataattttta ccacacgctg
    22381 taaaaacatc tttataaaca tctggcatca tgacaattgt gggacccata tcaaatgtaa
    22441 agccgtcttt ctttaattga ttcatacgcc cgcctacatt attatttttt tcaaatatcg
    22501 tcacttcatg accttgagaa gcaatacggg ctgccgctgc taatcctgtg acacctgcac
    22561 caattactgc aatcttcatt attcaaccac ctatattcta tgatatttac tatttatttc
    22621 atgaaacaac tttgcctttt tcctcttatc cacaaaaaca cgttcatgta atgtatagtt
    22681 agcctgtctc acttcgtcca gtatttcaat atatatacgt gctgctaatt ctatgattgg
    22741 ttgtgcttca atactaaata ctttgatttg atccataaca tcttgaaaat ctttttctgc
    22801 gatagctgca taatattccc ataagtcaat ataatgatta ttaacaccat tttggtacac
    22861 ttcagcaata tcaacttcat attgctttaa tcgttgctta ctaaaatata tccgttcatt
    22921 gtcaaaatct tcaccgacat ctcttaatat attaatcaat tgcaacgatt caccaagtct
    22981 tcttgcgaca tcgtatgtct gatgtgtttc atgatcactt aaaatcggcg tcaatacttc
    23041 acctactgta ccagcaacac cataacaata tccgaataat tcagcgtccg tttcaaacat
    23101 tgtaaaatgt tgatctttat atacagtatc aatgagatta taaaaagatt gaaaggcgat
    23161 atttttatgt tgtgcaacat gctgaagcgc catcatgatt ctacgatcac tttgaaagtg
    23221 atgatgttca tatgggtatt tttcaataga ttgtatatct tcttttattt gatttaaaaa
    23281 ttgaatatcg ccataaacat ctatactgtc atcaatttta cgacacacag cataaattgc
    23341 ccaaaccgct tttctttgat cttctggtaa caagtcaaaa gcgtaagaaa agctttttga
    23401 atgtttcttc atgattttat gacaatattt aaaattcata tccatcattg tcatactagt
    23461 cctcctatat tgaaatgcca ttaccttgat ttattgttct ttagatatag aatattgacg
    23521 acctttccat tcaactacac cataacgatg cgtttgtttc caagattgga tgaaaatttt
    23581 agtaaaaaac ataaataaca atggatgaca taccattaat aaattagaaa attggccgac
    23641 ccttcgatgc agataaataa attgtgtagt atagctcaag taaagtgcta ccatttttct
    23701 tacagacatt tggcgatatt ttaaactaag acatagccct aaaatactcg ctatagaacc
    23761 aaacaaccac aacacaattg ctgtcatgat cttaggcttt gtgccacctg ccccagttga
    23821 caaatgcttt gtccatcctt cttgtaatga ctgaaatcct tcttgataca tgcgaaatgc
    23881 aacaaatgga aacccttcat aaactgttac gggcaatgat tgtgaagtat atgcacttcc
    23941 taaagcaaat ccttcaataa tatgacggtt tgcactttta tgacctccag ttgcataata
    24001 atcttcttta tttgttaatg tcaccggtcc aaatgcatgc tggttagtcc gaccgtcgtc
    24061 taaggtagaa aatacattca taccaacgac tgtcattaaa ttaaatatcg ctgaaaaccc
    24121 ttcgtagaaa cgctttgtta tatgataagg ctgtacgctt aacaatcctt tttcaccttg
    24181 taattgatac tgattaatca acgtttcaac agcatctttc cttaagaaag ttacatcagc
    24241 atctacaaag gcaatgcgat tcgtacatgc atgcgtcaca ccttgataac aagcatgtga
    24301 tttcccatac catttgccgt cagtatcatc aacaacatct actacagtcg caccatatga
    24361 acgtgctaca cgtgctgttt catctgtcga tccgtcattc ataacaatga catctactgg
    24421 aacttgctgt tgtattatcg aatgtagtaa atgacctatt cttttttctt cgtttctagc
    24481 cggaataata attgttaatg ctttatgatt gaagttcagc gttttcgcct ttagctgatg
    24541 tctacgatta aatatcaatg caccacacgc catagacatg gtcactatta ctgttaatat
    24601 tcgtgataac catttcatag atatcacttc ctattcttcg cttctcgcgc gtttattttg
    24661 tctgcgactt gttgcccact taatgtaacc attggcatgc caccaccagg atttactgat
    24721 ccacctacaa agtacaagtt ttcaaaatac tgactttctt taggaaattt aaatcctttg
    24781 tttttctttt tatctgctac aacaccatat attgcaccac gattagaacg ataatttttt
    24841 tcaatatcct ccggtgtcca aacatcttca taaataatgt gttttcttaa atcagtaagt
    24901 cccatttttt ctaatttatc caaaatttta tccctaaact tcgcataatc ttcagtggta
    24961 aaaggctgat cttgaatata tggaatatgt ggtaagactt tgatattttc ataacctact
    25021 ggcgcttgtg tgtgatcagt tttattcgta tttactagat aaatggtcgg atcatctggc
    25081 aatacctttt catgaaaaac ttgttgataa ttgagataag cattttccgt aaaaaagaaa
    25141 ttatgatgtg ctaattgcgg gtattggcaa gcaacaccta aatgcatcac atatcctgag
    25201 cttgccggct caaattccct ctctaatttg tttaatcgtt gagtatcaag gtgaattaaa
    25261 tatttataag taggtatgac ttccatattt gaaataatat aatctgcctt tacaaactca
    25321 cctgtatcta atctgacacc cgtcacacgt ctttgatatg ttttaatatt gtccacacgt
    25381 gcacctgtat gaattgtgac accttcttca cgcgctagct tttccaaggc attggctaaa
    25441 tgatggattc caccttctac ataccaaagg ccttgctctt gttgcatatg gaataacata
    25501 gataatacag ctggcgcatc gtatgatgaa gaacctacat atttgataaa atagcctaac
    25561 atttgtcgca agtatggatt cgagatacgc ttgtctatgg cctgttgcat agtatgtaca
    25621 taatcataat taataagagc atttaatggc ccatgaaatt taataatttg agatagtgta
    25681 tctaaaccat agttgaaata ccctttttca gtaatacgat cgattcgtct tgtataattc
    25741 aaataatttt gcagttcctc tatatcctgt ttcgacaata tcgcattatg ctgacctgtt
    25801 tctttaatac cttcatacaa atcgatagtc gttccatctg gaaaaaagct acgccattga
    25861 tgtggcaatc gcttgattgt aacgtagtct gacatttgct tcttgctata ttcgaataat
    25921 ttttcaaaaa tataaggcat cgttaaaata gatggaccta aatcaaagcc aaagccatct
    25981 gattcatgac gattcacttt gcctcctata tgattatttt gttcatataa tgagaccgaa
    26041 tagccacttt gtgccattcg aattgctgca gaaatcccac ctaagccacc accaataacg
    26101 atgatatgtt tagtcatgac gttcacctct tcgttttaat atgcgtagta actgcgttaa
    26161 tctcggtcga ttatagcgtt gcacaataat gattggaaca ttagctatca ttgcatagaa
    26221 aatatttata tactttacta aacgagggcc tttattgaat atgatgactg gaagtatcga
    26281 tatccaatga atcaactctg ccctctttgt ctctataatc attttttcaa tttcatcagt
    26341 attgattgtc attaaatgac gctgatcata tatattttga ttaagctgat gaccatctaa
    26401 aatcttatgt ttccattttc ttacgtaaaa ccatttgttc caaaattttc catgcttctc
    26461 aaagttaaat gatttaaata ttatgtactt ctgacgaaaa tacttatcag gaa
//
LOCUS       DALPQQ010000021        26200 bp    DNA     linear   BCT 22-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus strain K18-6-464
            SAMD00233528-rid16434743.denovo.021, whole genome shotgun sequence.
ACCESSION   DALPQQ010000021 DALPQQ010000000
VERSION     DALPQQ010000021.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMD00233528
            Sequence Read Archive: DRR236061
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 26200)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 26200)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001543423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001543423.1
            Genome Coverage       :: 77x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/22/2022 17:09:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,811
            CDSs (total)                      :: 2,743
            Genes (coding)                    :: 2,689
            CDSs (with protein)               :: 2,689
            Genes (RNA)                       :: 68
            rRNAs                             :: 2, 4, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 4, 2 (16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 54
            CDSs (without protein)            :: 54
            Pseudo Genes (ambiguous residues) :: 0 of 54
            Pseudo Genes (frameshifted)       :: 27 of 54
            Pseudo Genes (incomplete)         :: 27 of 54
            Pseudo Genes (internal stop)      :: 10 of 54
            Pseudo Genes (multiple problems)  :: 10 of 54
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..26200
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMD00233528-rid16434743.denovo.021"
                     /strain="K18-6-464"
                     /db_xref="taxon:1280"
                     /geo_loc_name="Japan: Niigata"
     gene            complement(283..1143)
                     /locus_tag="O7798_000806"
     CDS             complement(283..1143)
                     /locus_tag="O7798_000806"
                     /EC_number="4.1.2.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002468309.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fructose-bisphosphate aldolase"
                     /protein_id="HDC2863076.1"
                     /translation="MPLVSMKEMLIDAKENGYAVGQYNINNLEFTQAILEASQEENAP
                     VILGVSEGAARYMSGFYTIVKMVEGLMHDLNITIPVAIHLDHGSSFEKCKEAIDAGFT
                     SVMIDASHSPFEENVATTKKVVEYAHEKGVSVEAELGTVGGQEDDVVADGIIYADPKE
                     CQELVEKTGIDALAPALGSVHGPYKGEPKLGFKEMEEIGLSTGLPLVLHGGTGIPTKD
                     IQKAIPFGTAKINVNTENQIASAKAVRDVLNNDKEVYDPRKYLGPAREAIKETVKGKI
                     KEFGTSNRAK"
     gene            1361..1882
                     /locus_tag="O7798_000807"
     CDS             1361..1882
                     /locus_tag="O7798_000807"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500843.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2529 domain-containing protein"
                     /protein_id="HDC2863077.1"
                     /translation="MSKILNTQLIGIFNRLEKQSLEIQMAAQCLIQAIGGEGYVYVKG
                     YDDLQFFESFILHSDERLKSSRKLDAIKDFKEIDSTDRVLLFAPFYNDQVALDIQKLI
                     DLDIDVVLISNKPKTDDFPDHLVHFIDLSTPRPIVYTEDYDKIVQPHAMALNYVYYDI
                     YTQMIEMTRDLEL"
     gene            complement(1991..3601)
                     /locus_tag="O7798_000808"
     CDS             complement(1991..3601)
                     /locus_tag="O7798_000808"
                     /EC_number="6.3.4.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500844.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CTP synthase"
                     /protein_id="HDC2863078.1"
                     /translation="MTKFIFVTGGVVSSLGKGITASSLGRLLKDRGLNVTIQKFDPYL
                     NVDPGTMSPYQHGEVFVTDDGAETDLDLGHYERFIDINLNKFSNVTAGKVYSHVLKKE
                     RRGDYLGGTVQVIPHITNEIKERLLLAGESTNADVVITEIGGTTGDIESLPFIEAIRQ
                     IRSDLGRENVMYVHCTLLPYIKAAGEMKTKPTQHSVKELRGLGIQPDLIVVRTEYEMT
                     QDLKDKIALFCDINKESVIECRDADSLYEIPLQLSQQNMDDIVIKRLQLNAKYETQLD
                     EWKQLLDIVNNLDGKITIGLVGKYVSLQDAYLSVVESLKHAGYPFAKDIDIRWIDSSE
                     VTDENAAEYLADVDGILVPGGFGFRASEGKISAIKYARENNVPFFGICLGMQLATVEF
                     SRNVLGLEGAHSAELDPATPYPIIDLLPEQKDIEDLGGTLRLGLYPCSIKEGTLAQDV
                     YGKAEIEERHRHRYEFNNDYREQLEANGMVISGTSPDGRLVEMVEIPTNDFFIACQFH
                     PEFLSRPNRPHPIFKSFIEASLKYQQNK"
     gene            complement(3937..4467)
                     /locus_tag="O7798_000809"
     CDS             complement(3937..4467)
                     /locus_tag="O7798_000809"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500845.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-directed RNA polymerase subunit delta"
                     /protein_id="HDC2863079.1"
                     /translation="MKIQDYTKQMVDEKSFIDMAYTLLNDKGETMNLYDIIDEFRALG
                     DYEYEEIENRVVQFYTDLNTDGRFLNVGENLWGLRDWYSVDDIEEKIAPTIQKFDILD
                     ADDEEDQNLKLLGEDEMDDDDDIPAQTDDQEELNDPEDEQVEEEINHSDIVIEEDEDE
                     LDEDEEVFEDEEDFND"
     gene            complement(4579..5439)
                     /locus_tag="O7798_000810"
     CDS             complement(4579..5439)
                     /locus_tag="O7798_000810"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500846.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HDC2863080.1"
                     /translation="MAKELCFEGITLKAFDEQYRSAINDFDLNERQQIYSSLPKEVID
                     DAINDADRIANVAINDKNEVVGFFVLHRYYQHEGYDTPENVVYIRSLSINEKYQGFGY
                     GTKIMMSLPQYVQGVFPDFNHLYLVVDAENDNAWNLYERAGFMHTATKEEGPIGKERL
                     YYLDLDSKHVSSLKLEEESRSEVTNVHIINLMIDGQKVGFIALEQIGERMNIAAIEVD
                     KSYRFNGIGSSALRQLPTYLRKNYDNLNVITMILFGENNDFKPLCLNSNFVEIEQTDD
                     YVVFEKYLNY"
     gene            5863..6666
                     /gene="coaW"
                     /locus_tag="O7798_000811"
     CDS             5863..6666
                     /gene="coaW"
                     /locus_tag="O7798_000811"
                     /EC_number="2.7.1.33"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500848.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II pantothenate kinase"
                     /protein_id="HDC2863081.1"
                     /translation="MKVGIDAGGTLIKIVQEQDNQRTFKTELTKNIDQVVEWLNQQQI
                     EKLCLTGGNAGVIAENINIPAQIFVEFDAASQGLGILLKEQGHDLADYIFANVGTGTS
                     LHYFDGQSQRRVGGIGTGGGMIQGLGYLLSQITDYKQLTDMAQHGDRNTIDLKVRHIY
                     KDTEPPIPGDLTAANFGHVLHHLDADFTPSNKLAAVIGVVGEVVTTMAITVAREFKTE
                     NIVYIGSSFHNNALLRKVVEDYTVLRGCKPYYVENGAFSGAIGALYLEK"
     gene            complement(6796..7467)
                     /locus_tag="O7798_000812"
     CDS             complement(6796..7467)
                     /locus_tag="O7798_000812"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500849.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2750 domain-containing protein"
                     /protein_id="HDC2863082.1"
                     /translation="MSYKAYPFFRDILINECIYFASKNKKLVRLNYKSEAYVGVWTEE
                     SVAVSFLTSRDIPFDKVVKMDVDRFATYELDELFDEQDHIIMNQTMEEEGHLLNVVAV
                     TQEVMTELDKIRIKEFVQDVAKYDEVYGLTKKGSKQFILISENDSDEKKPHIMPVWSI
                     KNRALKVRDEDFEECDLITIEGSVFGEWLDELRDDHKAVAIDLKTGVVGTIVSAQKLS
                     NELTF"
     gene            complement(7866..9059)
                     /locus_tag="O7798_000813"
     CDS             complement(7866..9059)
                     /locus_tag="O7798_000813"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500850.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-grasp domain-containing protein"
                     /protein_id="HDC2863083.1"
                     /translation="MTNNGNEPNLTLSDLYDKDVVYTSRPSYISNPWLKPDEHQSNFL
                     TGRELLIANQLPVIVHEASATDKLHQLFQVIGKEVPNSIYTFNNQQSYENLIKQLAHK
                     ENKKIYFQYIHDETILNQQYYALDKTLFVALNNKARIPEWTNGKFLPKRKVVKIEQFE
                     NEIKNWEFPLVIKPGDDLPTAGGYGVMICYHDADLQKAITRIKEATAETNSLIIEQKI
                     EEKANYCVQFAYSESLGIQYLGAATQLTDKYGFYNGNENTTNVPEHVIEAGRQIMENG
                     VNQGFFGVAGFDLLVDEDDNVYAIDLNFRQNGSTSMLLLANELNSGYQKFYSYHSKGD
                     NTHFFNTILKYVKEGSLYPLSYYDGDWYGEDKVKSRFGCIWHGDSKETVLENERAFLA
                     ELEHY"
     gene            complement(9059..10243)
                     /locus_tag="O7798_000814"
     CDS             complement(9059..10243)
                     /locus_tag="O7798_000814"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500851.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M20 family metallopeptidase"
                     /protein_id="HDC2863084.1"
                     /translation="MSEKQQILDYIETNKYSYIEISHRIHERPELGNEEIFASRTLID
                     RLKEHDFEIETEIAGHATGFIATYDSGLDGPAIGFLAEYDALPGLGHACGHNIIGTAS
                     VLGAIGLKQVIDQIGGKVVVLGCPAEEGGENGSAKASYVKAGVIDQIDIALMIHPGNE
                     TYKTIDTLAVDVLDVKFYGKSAHASENADEALNALDAMISYFNGVAQLRQHIKKDQRV
                     HGVILDGGKAANIIPDYTHARFYTRAMTRKELDILTEKVNQIARGAAIQTGCDYEFGR
                     IQNGVNEFIKTPKLDDLFAKYAEEVGEAVIDDDFGYGSTDTGNVSHVVPTIHPHIKIG
                     SRNLVGHTHRFREAAASVHGDEALIKGAKIMALMGLELITNQDVYQDIIEEHAHLKGN
                     GK"
     gene            10554..11024
                     /locus_tag="O7798_000815"
     CDS             10554..11024
                     /locus_tag="O7798_000815"
                     /EC_number="4.4.1.21"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500852.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S-ribosylhomocysteine lyase"
                     /protein_id="HDC2863085.1"
                     /translation="MTKMNVESFNLDHTKVVAPFIRLAGTMEGLNGDVIHKYDIRFKQ
                     PNKEHMDMPGLHSLEHLMAENIRNHSDKVVDLSPMGCQTGFYVSFINHDNYDDVLNIV
                     EATLNDVLNATEVPACNEVQCGWAASHSLEGAKTIAQAFLDKRNEWHDVFGTGK"
     gene            complement(11176..11526)
                     /locus_tag="O7798_000816"
     CDS             complement(11176..11526)
                     /locus_tag="O7798_000816"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500853.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDC2863086.1"
                     /translation="MNILRYLLGIGFSVIGVLHFTRERQFRNIIPKCLPLRKTAVLVT
                     GIFEILFGLALLIKRPSQCLKNTINLFLLAVFPANIYMAVKKLPLGDKQLPTWQLYLR
                     LPMQFVLMGLIKKL"
     gene            complement(11540..12841)
                     /locus_tag="O7798_000817"
     CDS             complement(11540..12841)
                     /locus_tag="O7798_000817"
                     /EC_number="2.4.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500854.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyrimidine-nucleoside phosphorylase"
                     /protein_id="HDC2863087.1"
                     /translation="MRMIDIIEKKRDGHTLTTEEINFFIGGYVKGDIPDYQASSLAMA
                     IYFQDMNDDERAALTMAMVNSGDMIDLSDIKGVKVDKHSTGGVGDTTTLVLAPLVAAV
                     DVPVAKMSGRGLGHTGGTIDKLEAIDGFHVEIDEATFVKLVNENKVAVVGQSGNLTPA
                     DKKLYALRDVTGTVNSIPLIASSIMSKKIAAGADAIVLDVKTGSGAFMKTLEDAEALA
                     HAMVRIGNNVGRNTMAIISDMNQPLGRAIGNALELQEAIDTLKGQGPKDLTELVLTLG
                     SQMVVLANKAETLEEARALLIEAINSGAALEKFKTFIKNQGGDETVIDHPERLPQAQY
                     QIEYKAKKSGYVTELVSNDIGVASMMLGAGRLTKEDDIDLAVGIVLNKKIGDKVEEGE
                     SLLTIHSNRQDVDDVVKKLDSSITIADHVVSPTLIHKIITE"
     gene            complement(13120..13782)
                     /gene="deoC"
                     /locus_tag="O7798_000818"
     CDS             complement(13120..13782)
                     /gene="deoC"
                     /locus_tag="O7798_000818"
                     /EC_number="4.1.2.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500856.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="deoxyribose-phosphate aldolase"
                     /protein_id="HDC2863088.1"
                     /translation="MNSAKLIDHTLLKPESTRTQIDQIIDEAKAYHFKSVCVNPTHVK
                     YAAERLADSEVLVCTVIGFPLGASTTATKAFETEDAIQNGADEIDMVINIGALKDGRF
                     DDVQQDIEAVVKAAKGHTVKVIIETVLLDHDEIVKASELTKAAGADFVKTSTGFAGGG
                     ATAEDVKLMKDTVGADIEVKASGGVRNLEDFNKMVEAGATRIGASAGVQIMQGLEADS
                     DY"
     gene            14097..14807
                     /gene="deoD"
                     /locus_tag="O7798_000819"
     CDS             14097..14807
                     /gene="deoD"
                     /locus_tag="O7798_000819"
                     /EC_number="2.4.2.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500857.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="purine-nucleoside phosphorylase"
                     /protein_id="HDC2863089.1"
                     /translation="MTKGTPHIQPNGVKIAKTVLMPGDPLRAKYIADNFLENVEQFND
                     VRNMFGYTGTYKGKEVSVMGSGMGIPSIGIYSYELYNFFDVDTIIRIGSCGALQENVN
                     LYDVIIAQAASTNSNYVDQYNIPGHFAPIADFELVTKAKNVADQIGATTHVGNVLSSD
                     TFYNADPTFNDAWKKMGILGIEMESAGLYLNAIHAGKKALGIFTVSDHILRDEATTPE
                     ERQNSFTQMMEIALEIAE"
     gene            complement(14928..15371)
                     /locus_tag="O7798_000820"
     CDS             complement(14928..15371)
                     /locus_tag="O7798_000820"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500858.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA starvation/stationary phase protection
                     protein"
                     /protein_id="HDC2863090.1"
                     /translation="MSNQQDVVKELNQQVANWTVAYTKLHNFHWYVKGPNFFSLHVKF
                     EELYNEASQYVDELAERILAVGGNPVGTLTECLEQSIVKEAAKGYSAEQMVEELSQDF
                     TNISKQLENAIEIAGNAGDDVSEDMFIGMQTSVDKHNWMFKSYLS"
     gene            complement(15571..15984)
                     /locus_tag="O7798_000821"
     CDS             complement(15571..15984)
                     /locus_tag="O7798_000821"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500859.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiol-disulfide oxidoreductase DCC family
                     protein"
                     /protein_id="HDC2863091.1"
                     /translation="MPIVYYDGNCIYCYNYVIWLIQHDLPRNYQFATLKGEVGQQFFK
                     QHPEAANKNSVILQKGDRIYFESQAIIKLITALPNRTKLLGVGLWLVPKPVRNFGYRM
                     FANNRNRMWKTTWHQPNDYEKSFFLDDNAKVKLTD"
     gene            complement(16442..17815)
                     /locus_tag="O7798_000822"
     CDS             complement(16442..17815)
                     /locus_tag="O7798_000822"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500860.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EVE domain-containing protein"
                     /protein_id="HDC2863092.1"
                     /translation="MTAETNYFWLNCGYNRWNHNEPLVGQTALFESGAHFNPSQGFRA
                     FKKAKVGDQVIFYQVQTDTGLLGCGEIISVETGAQNKIRVQFRFNEQLKPLTADYLKR
                     SEALEFRISNMKETLFNQITAEEFDLISGLGKGEIKIPRYFFLAETEEFEPGNQYTIY
                     THTYNGIKRNGYHFYTQLEEGDNIIFYNRTKNQSVVGIGEVSKHIHEKPPIPGRTNST
                     VIEVSYEKDITPITLSTLNKHPKLKNLYFLQENAKQAIASMSQAQYDAIIEMSDNNGL
                     KSPFEMVQKPDMLESEKEEALKPFILLVVDRKEEGLKAANDLLQKANANPVITTGHPD
                     FSEDMLYGKYLPNETGALYYREGFITQLMPKKDKSYLVIDNFNRIDTDIFQTYINVLE
                     GYEVTLPRYNKDGNMIKWSRQKDSFYYFNPNWHIVGITYDSLEEIKEKYSEQFLKYTR
                     IVKVKHD"
     gene            complement(18487..18717)
                     /locus_tag="O7798_000823"
     CDS             complement(18487..18717)
                     /locus_tag="O7798_000823"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500861.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDC2863093.1"
                     /translation="MKQFLYIALVCGVIAGLGAFLHIPQYPSMTIPRIVAILGIISAM
                     LTFKDKQISASLKFSALLINVLPLCGTFVASN"
     gene            complement(18748..19686)
                     /locus_tag="O7798_000824"
     CDS             complement(18748..19686)
                     /locus_tag="O7798_000824"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001620169.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class I mannose-6-phosphate isomerase"
                     /protein_id="HDC2863094.1"
                     /translation="MPLFLQPILKTKLWGGQRLSEFGYQLDNDTTGECWCVSAHPNGT
                     SEIINGPYQGQTLDRIWSEHRELFGDFPSKDFPLLTKIVDARESLSIHVHPDNSYAYE
                     HENGQYGKSECWYIIDAEEDAEIVIGTLAESREEVANHVQHGTIESILRYIKVKPGEF
                     YFIPAGTVHTISSGILAYETMQSSDITYRLYDFNRQDNQYNDRPLNIEKALDVIQYNA
                     PLPNILPESEIIENHKCTHIVSNDFFTLVKWEISGTLNYMKPREFCLVTVLEGEGQMI
                     VDGEIFKLTTGTNFILTSEDLDSVFEGDFTLMISYV"
     gene            complement(20121..20786)
                     /locus_tag="O7798_000825"
     CDS             complement(20121..20786)
                     /locus_tag="O7798_000825"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500864.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HDC2863095.1"
                     /translation="MNILVIGANGGVGSLLVQQLAKENVPFTAGVRQSDQLNALKSQG
                     MKAILVDVENDSIETLTETFKPFDKVIFSVGSGGNTGADKTIIVDLDGAVKSMIASKE
                     ANIKHYVMVSTYDSRRQAFDDSGDLKPYTIAKHYADDYLRRSGLNYTILHPGALTNAA
                     GSGKIEAAQYFDGKGEIPREDVATVLKEIVTSNHFNHQEFQIISGDQDIKDALTQFEN
                     ETD"
     gene            20938..21258
                     /gene="czrA"
                     /locus_tag="O7798_000826"
     CDS             20938..21258
                     /gene="czrA"
                     /locus_tag="O7798_000826"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500865.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Zn(II)-responsive metalloregulatory
                     transcriptional repressor CzrA"
                     /protein_id="HDC2863096.1"
                     /translation="MSEQYSEINTDTLERVTEIFKALGDYNRIRIMELLSVSEASVGH
                     ISHQLNLSQSNVSHQLKLLKSVHLVKAKRQGQSMIYSLDDIHVATMLKQAIHHANHPK
                     ESGL"
     gene            21260..22240
                     /gene="czrB"
                     /locus_tag="O7798_000827"
     CDS             21260..22240
                     /gene="czrB"
                     /locus_tag="O7798_000827"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500866.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CDF family zinc efflux transporter CzrB"
                     /protein_id="HDC2863097.1"
                     /translation="MSHSHHHHDHMHSHVTTNNKKVLFISFLIIGLYMFIEIIGGLLA
                     NSLALLSDGIHMFSDTFSLGVALVAFIYAEKNATTTKTFGYKRFEVLAALFNGVTLFV
                     ISILIVFEAIKRFFVPSEVQSKEMLIISIIGLIVNIVVAFFMFKGGDTSHNLNMRGAF
                     LHVIGDLLGSVGAITAAILIWAFGWTIADPIASILVSVIILKSAWGITKSSINILMEG
                     TPSDVDIDEVITTIKKDSRIQSVHDCHVWTISNDMNALSCHVVVDHTLTMKECELLLE
                     NIEHDLLHLNIHHMTIQLETPNHKHDESIICSGTHSHSHNHHAHHHAHVH"
     gene            22506..23597
                     /locus_tag="O7798_000828"
     CDS             22506..23597
                     /locus_tag="O7798_000828"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500867.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator"
                     /protein_id="HDC2863098.1"
                     /translation="MFTYFKSAFKNAKPQLLITLIYALIAFAVIAVVYLLANFQLAKY
                     AQTIAIYSQFGQKPPVDAYLKVIAVLLIAAVVSLFVLVQIFIGITNVMKRAMSHEKVK
                     FTDLFIAFKKGNYLKSVLIGLVSIAMIIVLSLLTSLLYKLFSPVSEMIMNSVQSSYAD
                     STHLIGIAITTQSIIIIVVLLIKAIITWLLLIPIFNFMTSFVESTNDKVKTHLANGFK
                     AMKNGQKTFFKFFIGILLLNLIIILFKTPVGYLISFNTQSLSQSVAENIIRVYTVMTI
                     ILFVVIHAIILMGIVQYYLKRGQKITKDKVKTADKNKKVVTEPKNTKVENDKVTTSVE
                     TKTEKAQDSLNDNTTKTMTSDKPEDNQPK"
     gene            complement(24097..24201)
                     /locus_tag="O7798_000829"
     CDS             complement(24097..24201)
                     /locus_tag="O7798_000829"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500868.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDC2863099.1"
                     /translation="MLLLERTSMSDFEMLMVVLTIIGLVLISTQDHKK"
     gene            complement(24362..24845)
                     /locus_tag="O7798_000830"
                     /pseudo
     CDS             complement(24362..24845)
                     /locus_tag="O7798_000830"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001837446.1"
                     /note="frameshifted; internal stop; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="recombinase family protein"
     gene            complement(24888..26024)
                     /locus_tag="O7798_000831"
     CDS             complement(24888..26024)
                     /locus_tag="O7798_000831"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500870.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SAP domain-containing protein"
                     /protein_id="HDC2863100.1"
                     /translation="MSVNARDLLVLHTNVNRLVGEEIFANKCLANNDVQIMNSIKKLI
                     EAELLTTTNDFEVSIYKKTRPELQSILKSFGIKTTGNKPDLIKRIDDNFHIINNLDLP
                     YVYIPTKKGEEILKKTEYLTSFIQSYGEISLERAYYLVENYIDENCDDKVAEIYKFEF
                     QRKYDNGEFDFNHGYNFELNMLIDHYKRDVKDYDNARKYSNIYLYFGLRDFLKKLMSN
                     YSYYDSKGNIDLNEIQNDLNRFINSSASGMYERLIYNENLSNNIMFELFKKDTQDYSD
                     LEEQLIEKFINYVVSNVKKESRSNTLIELSKILENGYTIDKEEFKKEDDYLSKYIFTD
                     IDYLKKLESKINVAIDIRSGEIHLVLDDDSLDILIQNQKYGNEF"
BASE COUNT         8367 a         4856 c         3562 g         9415 t
ORIGIN      
        1 gtctaaagtc tgattattca actaaatatt gacgttgttt tgacaattat ttagttttaa
       61 ttctacggtt ttcacgtaaa cttttttcat aaattgctca ttttccttat aattatatca
      121 caatcaattt tgatatattt taccattttt acgctttcat tttaaaatca aactgtttta
      181 tttattactt atacgacata aaaaagaagc aaacaccatt ttgtctgctt cttttaaaat
      241 taatatccct acgttattaa taacttaaag actaaatatt aattatttag cgcggttaga
      301 agtaccgaac tctttaattt tacctttaac tgtttctttg atggcttcac gtgcaggtcc
      361 taagtattta cgaggatcgt aaacttcttt gtcgttattt aaaacgtcac gaactgcttt
      421 tgctgaagcg atttggtttt cagtgtttac gttaatttta gctgtaccaa atggaattgc
      481 tttttggata tctttagtcg ggataccagt accaccgtgt aatactaatg gtaaacctgt
      541 agataaaccg atttcttcca tttctttaaa tcctaatttt ggttcacctt tgtatggacc
      601 atgaactgaa cctaatgctg gcgctaatgc atcaatacca gttttttcaa ctagttcttg
      661 acattcttta ggatcagcat aaatgatgcc gtctgctaca acatcatctt cttgtccacc
      721 aacagtacct aattcagctt ctacagaaac acctttttca tgagcgtatt caacaacttt
      781 tttagttgtt gctacgtttt cttcgaatgg gctgtgtgaa gcatcgatca ttactgatgt
      841 gaaaccagca tcgatagctt ctttacattt ttcaaagctt gaaccatggt ctaaatggat
      901 tgctacagga atagtgatgt ttaagtcatg cattaaccct tcaaccattt taacaattgt
      961 gtagaaaccg ctcatgtaac gagcagcacc ttcagaaaca cctaaaatta caggtgcatt
     1021 ttcttcttgt gacgcttcta aaattgcttg agtgaattct aggttattaa tattgtattg
     1081 acctaccgca taaccatttt cttttgcatc aattaacatt tctttcattg aaactaaagg
     1141 catgaaagtt cctccttgag tgcttacgca cgtatttttc aaagtaatta tatcaaaaaa
     1201 atagcgtcaa tgcattgaaa tactgcagat taaatgtgta ttttttgaaa aatgcgatag
     1261 ttatactaaa tgcaaacgta tacattttta tacaatttaa gccgttgcat aatatgtagt
     1321 cattaattac aatattttat aagtagattg gaggataaag atgtcaaaaa tcttaaacac
     1381 acaactaata ggtatcttta ataggctaga aaaacaatct ttagaaattc aaatggccgc
     1441 ccaatgttta attcaagcaa ttggtggcga aggttatgtt tatgtaaaag gttatgatga
     1501 tttacagttt ttcgaaagtt tcattctaca tagtgatgag cgtttaaaat ctagccgaaa
     1561 acttgacgct attaaagact ttaaagaaat tgactcaact gatcgtgtat tattattcgc
     1621 accattttat aatgatcaag ttgcattaga tattcaaaaa cttatcgact tagatatcga
     1681 tgtggtctta ataagcaaca aacctaaaac agatgatttc cctgatcatc tcgtacattt
     1741 tatcgattta tctacaccaa gacctatagt ctacactgaa gattacgata agattgtcca
     1801 accacatgcg atggcattga attatgtata ctatgacatt tatacacaaa tgattgaaat
     1861 gacaagagac ttagaattat aaaagtcact attgttattt cataccttgt cactaacata
     1921 atattaaaat tatacgaaaa accggtactt tcaatgttta acaatgaaag taccggtttt
     1981 attagcaaat ttatttattt tgttgatatt ttaatgaagc ttcaataaat gatttaaaaa
     2041 tcgggtgcgg acgatttggt ctagataaga attctgggtg gaattgacaa gcaataaaga
     2101 aatcatttgt cggaatctct accatttcta ctaaacgtcc atctggactt gtaccagaaa
     2161 tcaccatacc atttgcttct aattgttctc tatagtcatt attaaattca taacgatgac
     2221 gatgtctttc ttcaatttcc gctttaccat aaacatcttg tgccaatgtg ccttctttaa
     2281 ttgaacatgg atataagcct aagcgtaatg taccacctaa atcttcgata tctttttgtt
     2341 ctggtaataa atctataatt gggtatggtg ttgctgggtc taattcagct gaatgtgcgc
     2401 cttcaaggcc taatacgttt cttgaaaatt caactgttgc aagttgcatt cctaaacaaa
     2461 taccaaagaa tggtacattg ttttctctag catacttaat tgcactaatt ttaccttcac
     2521 ttgcacggaa accaaatcca cctggtacta aaataccgtc gacatctgca aggtattcgg
     2581 ctgcattttc atctgttact tcacttgaat caatccatct aatgtcaata tctttggcaa
     2641 aaggatatcc agcatgtttc aatgattcaa caactgataa atatgcatct tgtaagctaa
     2701 catatttacc tactaaacca attgtaattt taccatctaa attattaacg atatctaaca
     2761 actgtttcca ttcatcaagc tgtgtttcat atttcgcgtt taattgtaaa cgtttaataa
     2821 cgatatcatc catattttgt tggcttaatt gtaatggaat ttcgtataaa gagtctgcat
     2881 cacgacattc aataacactt tctttattaa tgtcacagaa taatgcaatt ttatctttta
     2941 aatcttgtgt catttcatat tcagttctta caacgattaa gtctggttga atacctaagc
     3001 ctcgtaattc tttaacacta tgttgtgttg gcttcgtttt catttctcca gcagctttaa
     3061 tataaggcag taatgtacag tgaacataca taacattttc tctacctaaa tcgctacgaa
     3121 tttgacgaat cgcttcaata aacggtaatg actcaatatc acctgttgta ccgccaattt
     3181 cagtgataac aacgtctgca ttcgtacttt cccctgcaag taataaacgt tctttaattt
     3241 catttgtaat atgcggaata acttgaactg ttccgcctaa gtaatcacca cgacgttctt
     3301 ttttcaatac gtgtgaatac actttaccgg ctgtcacatt tgaaaacttg tttaaattaa
     3361 tatcaataaa tctttcgtaa tgtcctaagt ctaggtcagt ttctgcacca tcatccgtta
     3421 cgaatacttc accatgttga taaggactca ttgtacctgg gtcaacattt aagtatggat
     3481 cgaatttttg aattgttaca tttagacctc tatcttttaa taatctacct agagaagatg
     3541 ctgtaatacc cttccctaat gatgaaacta cgccacctgt tacaaaaata aattttgtca
     3601 tgtcttgacc tcctaattat taaagggaat gcttcctcat caattgtaaa aattacgtaa
     3661 aacataacat taaagcaagc tcattcaagt tgtttatttg tcgaattcga caaaattaaa
     3721 ttctgtttac ttaccgtttc catactgcta tgtcactatg tatatcattt acaactttga
     3781 tttttgcgtt atcatttctt gatttactca attaaataaa aaaacgctcc ctctcacaaa
     3841 ttctgtaagg ggagcgtata aattttatac acgtgtccta tttaaaggag cccgaataaa
     3901 attttatcat ctttcaacta aaagtcaaac aaaaaattaa tcgttgaagt cttcttcgtc
     3961 ttcaaacact tcttcgtctt cgtctagttc atcttcatct tcttcaatga ctatatccga
     4021 atgattgatt tcttcttcaa cctgctcatc ttctggatca tttagttctt cttgatcatc
     4081 tgtttgagct ggaatatcat cgtcgtcatc catttcatct tcgcccaata attttaagtt
     4141 ttgatcttct tcatcatctg catccagaat atcgaatttt tgaatagttg gtgcgatttt
     4201 ctcttcaata tcatctaccg aataccaatc acgtaatccc cataaatttt ctccaacatt
     4261 taaaaaacga ccatctgtgt ttaaatccgt gtaaaattgt acaacacgat tttcaatttc
     4321 ttcgtactca taatcaccta acgctctaaa ttcatcgatg atatcatata agttcattgt
     4381 ttcgccttta tcattcaata atgtataagc catatcaata aatgattttt catcaaccat
     4441 ttgttttgta taatcttgaa ttttcattgc ccaatacttc ctttcgaagg atataatcta
     4501 aatttatacg tctgaattca tttatatata gtaacaaaac taaattataa atgacaatat
     4561 catatttcgc aatcactgtt agtaatttaa atatttttcg aaaacgacat aatcatcagt
     4621 ttgttcgatt tcaacgaaat tactatttaa acataatggt ttaaaatcat tattctctcc
     4681 aaacagaatc atcgtaatca cattaaggtt gtcatagttt tttcttaagt aagttggcaa
     4741 ttgtcgcaga gcacttgaac caataccatt aaagcgatat gatttatcca cttcaatagc
     4801 agcaatgttc atgcgttcac caatctgctc caatgcgata aagccaacct tttggccatc
     4861 aatcattaaa ttaatgatat gtacattggt cacttctgaa cgactttctt cttcaagctt
     4921 taatgatgaa acatgttttg aatctaagtc caagtaatat agtcgttctt tgccaattgg
     4981 tccttcttct ttagtcgctg tatgcatgaa tccagcacgt tcgtataggt tccaagcatt
     5041 gtcattttcc gcatctacta ctagatatag atgattaaaa tcaggaaata caccttgaac
     5101 atattgcggc aatgacatca ttattttcgt gccatatcca aaaccttgat atttttcatt
     5161 aatcgataat gaacgaatat aaacgacatt ttcaggtgta tcataacctt catgctgata
     5221 gtaacgatgt aatacaaaaa agcccaccac ttcattttta tcgtttattg ctacgttagc
     5281 aatcctatca gcatcattaa ttgcatcatc aataacttct ttaggtaaag atgaatatat
     5341 ttgttgtctt tcattcaagt caaaatcatt aattgctgaa cgatattgtt catcaaatgc
     5401 ttttaaagtg ataccttcaa aacaaagttc tttagccata tatttaaccc ctatcttttt
     5461 atatatgaag catgaatccc catattattt tacctattat ttcactacga taccattatt
     5521 tgctctaagt taaataaatt acttatttat attttttaaa tttcaaaatt aatgtactat
     5581 tcctcattac ttatcatttt aatcagagac ttacaaatac actgcgtacg aactactttt
     5641 aatattgcgt cactaactaa caatcctata caacttcaaa attcctagaa aataatatat
     5701 ataacttaac gtccacgttt gtaaaacatt aattgcgata cgcttacaat gttgaaatgc
     5761 aatggcatca aatttgttaa taattactat tattacttgt tttttagtca ttttactata
     5821 ctattattta aggatagaca ttaataatga ggtgggaatc ttatgaaagt tggcattgac
     5881 gctggcggta cactaattaa aatcgttcaa gagcaagata accaacgtac ttttaaaact
     5941 gaattaacta aaaatattga tcaagttgtg gaatggttaa accaacagca aattgaaaaa
     6001 ttatgcttaa ctggaggtaa tgcaggtgtc attgctgaaa acatcaacat tcctgcacaa
     6061 atttttgtag agtttgatgc tgcatctcaa ggactaggta ttttgttaaa agagcaaggc
     6121 catgacttag cagattatat ttttgcaaat gttggtaccg gtacgtcact acattatttc
     6181 gacggccaat cacaacgtcg tgtaggcggt atcggtacag gtggaggcat gattcaagga
     6241 ctcggttatt tactaagtca aatcactgat tataaacagt taactgacat ggcacaacac
     6301 ggtgatcgta acactatcga tttaaaggtt agacatattt ataaagatac cgaaccaccc
     6361 attcccggtg atttaacagc agctaatttt ggtcatgtac tacatcattt agatgctgat
     6421 tttacaccta gcaataaatt agcagccgtt attggtgtcg ttggcgaagt tgttacgaca
     6481 atggccatta ctgttgcacg tgaatttaaa actgaaaata tcgtttatat cggttcttca
     6541 tttcataata acgctttatt acgcaaagtt gtggaagatt atactgtgtt acgcggttgc
     6601 aaaccgtact atgttgaaaa cggcgcattt tcaggtgcta ttggtgcatt atatttagaa
     6661 aaatagaaaa agaccattta tatgcgcgtt gttttaaata aacgctatat aaatggcctt
     6721 ttattttatg gtctaagtgt tttgaatacg tattgttcca tttattatca cttaattact
     6781 tacaactcaa ttcaattaaa atgtaagttc attagacaat ttttgcgctg aaacaattgt
     6841 accaaccacg ccagttttta aatctatcgc aacggcttta tgatcatctc taagttcatc
     6901 tagccattct ccgaaaacag aaccttcaat cgtaattaaa tcacactctt caaaatcttc
     6961 atctcgaact tttaacgctc tgtttttaat actccataca ggcataatat gcggcttttt
     7021 ttcgtcgcta tcattttcac taatgagaat aaactgctta ctaccttttt tagttaagcc
     7081 gtatacttca tcatatttcg ctacatcttg gacaaattct ttgattctaa ttttatctaa
     7141 ttccgtcatc acttcttgtg taacagctac aacgtttagt agatgccctt cttcttccat
     7201 tgtttgattc ataataatat ggtcttgttc atcaaacaat tcatctaatt cataagtagc
     7261 aaaacgatca acgtccattt ttacaacttt atcaaatgga atatcacgac ttgttaaaaa
     7321 tgatacggcc acactttctt ctgtccaaac gcctacatac gcttcacttt tataatttag
     7381 gcgtactagt tttttatttt tagaggcgaa ataaatacat tcatttatta atatatctct
     7441 aaagaatgga tatgctttat aagacatgct tgaccctcac tttttaaaat atgtcataca
     7501 taaaatagta aatgactcca acaagttagt caattagaca tattatgaat tcaatttaat
     7561 gtcatgtttt tcattttaaa aattcaatag cattaaattt tacgtataca caaattcggt
     7621 ctataacacg aaacatatct agttactaaa aatttcaaaa cgataacctt tagtatacct
     7681 ttatcaacaa aatggcaact cttataacat agtgaaataa aagtcgccat ttaatattag
     7741 tattacaaag tattgccata tcataaattt aattactgtt gactagaatc gaaaaaagct
     7801 tgttacaaac gcatattcag tcaactactg gcaacacaac attgtagcgc cttatgttcc
     7861 gaactctaat agtgttcaag ttcagctaaa aatgcgcgtt cattctccag tactgtttct
     7921 tttgaatcac catgccaaat acagccaaac cttgatttaa ctttatcttc accgtaccaa
     7981 tcaccatcat aataagataa cgggtataaa ctaccttctt tgacatattt caaaatcgta
     8041 ttgaagaaat gtgtgttatc accttttgaa tgataactat aaaacttttg atatcctgaa
     8101 ttcaactcgt tagcaagtaa taacatgctc gttgaaccat tttgtctaaa gtttaaatca
     8161 atcgcataaa cgttatcatc ctcatcgacg agtaggtcaa aaccagctac accaaagaat
     8221 ccttgattca caccgttttc cataatttgt ctacctgctt ctataacgtg ctctggtaca
     8281 ttagtagtat tttcatttcc gttataaaat ccgtacttat ccgttaattg cgttgccgca
     8341 ccaagatatt gaatgcctag cgattccgag tatgcaaact gaacgcaata attcgctttt
     8401 tcttcaatct tctgttcgat aataagcgaa ttcgtttcag cagttgcctc tttaatacgc
     8461 gttatcgctt tttgtaaatc tgcatcatga taacaaatca taacgccata gccacctgct
     8521 gtcggaagat catctcccgg cttaattact aacgggaatt cccaattctt aatctcgttt
     8581 tcgaattgct caatttttac aacttttctt tttggtaaaa acttcccatt tgtccattca
     8641 ggtattcttg ctttattatt taaagcaaca aataacgttt tatctaatgc ataatattgc
     8701 tgattcaaga ttgtttcatc atgaatatat tgaaaataaa tctttttatt ttccttatgt
     8761 gccaattgtt tgatcaagtt ttcgtaagat tgctgattgt taaatgtata aattgagttc
     8821 ggtacttcct taccaataac ttgaaatagc tgatgcaatt tgtctgtcgc actagcttcg
     8881 tgaacaataa caggtaattg atttgctatt aataactccc taccagttaa aaaattagat
     8941 tgatgttcgt ccggtttcaa ccatggattc gatatatacg aaggtcttga cgtatagaca
     9001 acatctttgt catataaatc acttaacgtt aagttcggct cattaccatt atttgtcatt
     9061 acttcccatt ccctttcaaa tgcgcatgct cttcaataat gtcttgataa acgtcttgat
     9121 ttgtaattaa ctctaacccc atcaacgcca ttattttagc gcctttaatt aatgcttcat
     9181 caccatgtac actcgcagcc gcttctctaa atctatgcgt atgtcctact aaattacgtg
     9241 atcctatttt aatatgagga tgtattgttg gcacaacatg acttacgttc cctgtatccg
     9301 tagagccata accaaaatca tcatcaataa ctgcttcacc aacttcttca gcatatttag
     9361 caaataaatc atctaatttc ggcgttttaa tgaattcatt cacaccgttt tgaattcgac
     9421 caaattcata atcacaacca gtctgtatcg cagctccacg tgcgatttga tttacttttt
     9481 ctgttaatat atccaattct ttacgcgtca ttgctctagt ataaaaacga gcatgtgtat
     9541 agtctggaat aatattagct gctttcccgc catctaaaat cacaccatgc acacgttgat
     9601 cttttttaat atgttgtcgt agttgtgcta caccattaaa ataactaatc atagcgtcta
     9661 atgcatttaa cgcttcatct gcattttcag aggcatgagc actttttccg taaaatttaa
     9721 catctaaaac atccactgcc aaagtatcaa tcgttttata agtttcattt cccggatgaa
     9781 tcattaaggc aatgtctatt tgatcaatca caccagcctt gacataagaa gctttagcgc
     9841 taccattttc cccaccttct tcagctggac atccaagaac gactacttta ccaccaattt
     9901 ggtcaatcac ttgcttcaaa ccaattgcac caagaacact tgcagttcca atgatattat
     9961 gaccacaagc atgacccaat cctggcaaag catcgtattc tgctaaaaaa cctatagctg
    10021 gcccgtcaag tcctgaatca tatgtcgcta taaacccagt tgcatgccca gcaatctcgg
    10081 tttcaatttc aaaatcatgc tctttcaaac gatctattaa agttcgagac gcaaatattt
    10141 cttcattacc aagttcagga cgttcatgaa ttctatgact gatttcgata taactatatt
    10201 tatttgtttc tatataatcg agaatttgtt gtttttcact cattttttac tatctccctt
    10261 ttaccctaca ctcattttaa tcatccacaa tattttgttc tttcaaaatg aattattact
    10321 tattctatcg gttttatctc atgatgtcat ctagtttttc tttatttaca aaattttcta
    10381 ataactaaaa gcctttcata aatttataaa acagtttcaa attgtaaaac ataagcccta
    10441 ttgttacaat ttaagtattg ttagaaacac aacttacaac aaacttaagt tttataatgc
    10501 aacaaatcat aagcgtttta tagttttgag tagttaatag gaggaaattc aaaatgacaa
    10561 aaatgaatgt tgaaagtttc aatttagatc atactaaggt ggttgcccca tttattagat
    10621 tagcgggaac gatggaagga ttaaacggag atgtcattca caaatacgac attcgtttca
    10681 aacaaccaaa caaagaacat atggatatgc ccggactaca ttcattagaa catttaatgg
    10741 ctgaaaatat tagaaatcat agtgacaaag ttgttgattt aagtcctatg ggttgccaaa
    10801 ctggtttcta tgtatcattt attaatcatg ataattatga tgatgtatta aatattgttg
    10861 aagcaacttt aaatgatgtg ctaaatgcta ctgaagtgcc tgcttgtaat gaagtacaat
    10921 gtggctgggc agcaagtcat tcattagaag gtgctaaaac tatcgctcaa gcatttctag
    10981 acaaacgaaa cgaatggcat gatgttttcg gtacaggaaa ataaatctta gtcaatcaag
    11041 ttaatcagaa aagcagtcga acaatgattt tacaatcgcc attgtccaac tgctttttat
    11101 tatgcttcaa agtcaaaaaa tcgaacaaat gaaaaagtaa aatctttaac atttgtccga
    11161 tttatttgag aaccactata atttcttaat tagtcccatt aacacgaact gcataggtaa
    11221 ccttaaatat agttgccatg ttggcaattg tttatctcct aaaggtaact ttttaactgc
    11281 catatagata ttagctggga atacagctag caagaataga ttgattgtat ttttcaagca
    11341 ttgagatggt cttttaatta aaagtgcaag tccaaataat atctcaaaga ttcctgtaac
    11401 aagaaccgct gtttttcgaa gtggcaaaca tttcggtatg atatttctaa attgtcgttc
    11461 tcgtgtaaaa tgcaatacac ctattacact aaaacctatt cctaataaat atcttagtat
    11521 gttcaatcag cttcaactcc tattctgtaa tgattttatg aattaatgta ggcgatacaa
    11581 catgatcagc aattgttatg cttgaatcta attttttaac aacatcgtct acatcttggc
    11641 gattactgtg aatcgttaat aatgattctc cttcttctac tttatcacca atttttttat
    11701 ttaaaacaat accaaccgct aaatcaatat catcctcttt tgttaaacgt cccgctccta
    11761 acatcatcga agcgacacct atatcgttag agactaattc agtcacataa cctgattttt
    11821 tagctttata ttcaatttga tattgagctt gtggcaaacg ctctggatgg tcaataacag
    11881 tttcgtcgcc accttggttt ttaataaatg ttttgaattt ttctaatgct gcacctgaat
    11941 taattgcctc aattagcaac gctctcgctt cttcaagcgt ttcagctttg tttgcaagta
    12001 caaccatttg agaacctaat gttaatacaa gttctgttaa atctttcgga ccttgtcctt
    12061 tcaacgtatc aattgcttct tgtaactcaa gcgcattgcc aatcgcacgt ccaagtggct
    12121 gattcatatc agaaataatc gccatcgtat tacgtcccac attattacca atacgtacca
    12181 ttgcgtgcgc taatgcttca gcatcttcta atgttttcat aaatgcaccg ctaccagttt
    12241 ttacatctaa tacaattgca tctgcaccag cagcaatctt tttactcata attgaagagg
    12301 caattaatgg tattgaattg acagtaccag taacatccct taaggcatat aattttttgt
    12361 ctgcaggagt taaatttcct gattgtccta caactgccac tttattttca ttaaccaatt
    12421 tcacaaatgt tgcttcatct atttcaacat gaaaaccatc aattgcttct aatttatcaa
    12481 tcgtaccacc tgtatgacct aatccacgcc cactcatttt tgcaacagga acatctacag
    12541 ctgctactaa tggtgctaaa accaatgtag ttgtatctcc tacaccacct gttgagtgct
    12601 tatctacttt gacaccttta atatcactca aatctatcat atcaccagaa ttaaccatag
    12661 ccatcgttaa tgctgcacgc tcatcatcat tcatatcttg gaaataaatc gccattgcta
    12721 aacttgatgc ttggtaatca ggaatatccc ctttaacata gccgccaata aagaaattaa
    12781 tttcttccgt tgttagtgta tgaccgtcac gctttttctc aataatgtct atcattctca
    12841 tttttatcat ccttttctta aaaagcttag gacaaagcat ctgcgctttc tctagtccat
    12901 ttttaaaagc acaagcgaaa attattatag caagctatcg atttcatttt taatatcaca
    12961 atttcaatgc gatgttatta ttcttaaata gattggttat aacgttaaag tccctattaa
    13021 attatcttag aatcatcatg gcatttatga tgtcttaaag ctgatatcga catacttata
    13081 tatggttacg atgtcccatg cttacatatt tttataaaat tagtaatctg aatctgcttc
    13141 taaaccttgc ataatttgaa cgcctgcgct cgcaccaata cgtgtcgcac ctgcttcaac
    13201 cattttattg aaatcttcta aattacgtac gccacctgat gcttttactt ctatatcagc
    13261 acctactgta tctttcatta atttaacgtc ttctgcagtc gcaccgccac ctgcaaaacc
    13321 tgttgaagtt ttaacgaagt ccgcaccagc cgcttttgtt aattcactcg cttttacaat
    13381 ttcgtcatgg tccaacaata ccgtctcaat aatcactttt actgtgtgac ctttcgcagc
    13441 tttcaccact gcttcaatgt cttgttgtac atcatcaaaa cgtccatctt ttaatgcgcc
    13501 gatgttgatg accatgtcaa tttcatctgc accattttga atcgcatctt ctgtttcaaa
    13561 tgctttcgtc gcagttgtcg atgcacctaa tgggaatcct attaccgtac aaactaacac
    13621 ctctgaatca gctagtcgct ctgctgcata tttaacatgc gttggattca cacatacaga
    13681 tttaaaatgg tatgctttcg cttcatcgat gatttgatcg atttgcgtac gtgttgactc
    13741 aggcttcaat aaagtgtgat caatcaattt tgcactattc attttctatc tcctccttta
    13801 tggttgatta taaaaatacg gttgtaaatt agttgattga gcgtcaggtt catttaaata
    13861 tcaggttaga tgttcgcttt ttatgtaacc gcatacatat actattacat taattcattt
    13921 cccataaaca aacaatacaa ttgaacgtga tatcttcatt atgaacgatg acttgacaac
    13981 aagctaatca ggattatatt tttataattc tttaattcta tagtacaaaa attcgcaaaa
    14041 aagggaaaca aatgttatct taaaattatt aatgaatatt aaggagaaga taacaaatga
    14101 caaaaggtac accacatatt caaccaaatg gagtaaaaat tgctaaaaca gtattaatgc
    14161 ctggcgatcc gctacgtgca aaatatattg ctgataattt tttagaaaat gttgaacaat
    14221 ttaacgatgt acgtaacatg tttggttaca ctggtacata taaaggtaaa gaagtttctg
    14281 taatgggttc tggtatgggt attccaagta ttggtattta ctcatatgag ttatacaact
    14341 tctttgatgt agatacaatc attcgtatcg gttcttgtgg cgcattacaa gaaaatgtta
    14401 acttatacga tgttattatt gcacaagctg catcaactaa ttcaaattat gtagatcaat
    14461 acaatattcc aggtcatttc gcgcctatcg ctgacttcga gttagtaact aaagctaaaa
    14521 atgtcgctga ccaaatcggt gctactacac acgtaggtaa cgtattatct tctgatacat
    14581 tttacaatgc cgatccaaca ttcaatgatg cttggaaaaa aatgggtatt ttaggtatcg
    14641 aaatggaatc agctggttta tatttaaatg cgattcatgc tggtaaaaaa gcacttggta
    14701 ttttcacagt aagtgatcat attttacgtg acgaagctac tacacctgaa gaacgtcaaa
    14761 attcatttac acaaatgatg gaaatcgctt tagaaatcgc agagtaactt atttaaattg
    14821 actttaattg ctctttaaca atgcgattaa actcaaaaag ccaacacatt ctgggcgtat
    14881 ccccatttat gtgttggctt ttatttatat tattacttat ctgtagatta gcttaagtaa
    14941 gatttaaaca tccaattatg tttatctact gatgtttgca tacctataaa catatcttct
    15001 gatacatcat cgccagcatt accagcaatt tcgattgcgt tttctaattg ttttgagata
    15061 tttgtgaagt cttgtgataa ttcttcaacc atttgttctg cagagtaacc tttcgcagct
    15121 tctttaacaa ttgattgctc taagcattca gttaatgtac ctacagggtt tcctcctacc
    15181 gctaaaattc tttcagctaa ttcgtctaca tattggcttg cttcattata taattcttca
    15241 aatttaacgt gtaatgagaa gaagttaggc cctttcacat accagtggaa attgtgtagc
    15301 tttgtgtaag ctactgtcca gtttgctact tgttgattca attcttttac aacatcttgt
    15361 tgattactca tatttaatac actccttaaa attgtctacg tcttgcttgt ttatattaat
    15421 tattatatta taataattct aatctgtaaa gtgtttttac tctctttttt ataattattc
    15481 taatctaact gtaaagtgtt ccgctattta aatgcctaaa ttttaattca tcatctaata
    15541 tatccattat caattagcaa gtatgtttta tcaatcagta agttttactt tcgcattatc
    15601 atctaaaaag aacgattttt cataatcatt tggttggtgc catgttgttt tccacattct
    15661 atttctatta ttagcaaaca ttcgataacc gaaattacgg actggtttag gtacaagcca
    15721 taaacctacg cccaataatt tagttcgatt aggtagtgct gtgattagtt taataatcgc
    15781 ctgcgattca aaatatatac gatcaccttt ctgtaaaatc acactatttt tatttgccgc
    15841 ttctggatgt tgtttaaaaa attgttggcc aacttcacct tttaacgtgg caaattgata
    15901 atttcttggt aggtcatgtt gaattaacca aatgacatag ttataacaat atatacagtt
    15961 tccatcataa tatacgattg gcataattta ttcgctcctt taatagtact tatagtcatt
    16021 tttcctaatt taaaaacatt taaacaaggt tgtcacttga taagtcctcg cgacacgaaa
    16081 ttgccataaa atttattttt cagttttata tttattgtat aatgtatttt ttatttactt
    16141 taaatttctc aatctacagt gtaatcttat ttcttattat taacttagcg tttggtcatt
    16201 cgtcttattc aacataccac tggaaaactc atataaagtt ttaattctgt aacataaatt
    16261 cttttatatt catatactgt ctttattatt tattaaaata aaaacgagta atctatcata
    16321 agctcttaat tagctcttat ggttgattac ccgtcatttt ttctttatgc ggttattcaa
    16381 atatgcaatt atgcaatttt taatcctatc cttacttctt ttcaaaaact accatatatc
    16441 attagtcatg tttgactttg actatacgtg tgtattttaa aaactgctct gaatatttct
    16501 ccttaatttc ctctaaactg tcatatgtaa tacctacaat atgccaatta ggattgaaat
    16561 aatagaaaga atctttttgt cgtgaccatt taatcatatt accgtcttta ttataacgtg
    16621 gtaatgttac ttcatagcct tctaacacat taatatacgt ttggaaaatg tctgtatcta
    16681 tacgattaaa attatcaata actaaataac ttttatcctt tttaggcatt aattgagtaa
    16741 taaacccttc acgatagtat aatgcccctg tttcatttgg taaatacttg ccataaagca
    16801 tatcttctga aaaatcagga tgacctgttg ttataacagg atttgcattc gctttttgca
    16861 ataagtcatt agccgctttt aagccttctt cttttcgatc tacaacaagt aaaataaatg
    16921 gctttaacgc ttcttctttt tcactttcaa gcatatctgg tttttgaacc atttcaaatg
    16981 gagatttcaa tccattatta tcgctcattt caataattgc atcatactgt gcttgtgaca
    17041 tacttgcaat agcctgtttt gcattttctt gaaggaaata taagtttttc aatttaggat
    17101 gcttatttaa tgtacttaat gtaatcggtg taatgtcttt ctcataagac acttcaatca
    17161 ctgtactatt tgttctacca ggaattggtg gtttttcatg aatatgcttt gatacttctc
    17221 caattccaac gacagattga tttttcgttc gattataaaa aataatattg tcgccttctt
    17281 ctaactgagt ataaaaatga taaccattac gtttaatacc gttgtacgtg tgcgtataaa
    17341 tcgtatattg gtttccaggt tcaaattctt cagtttcagc taaaaagaaa taacgcggta
    17401 tcttaatttc gcctttacca agaccactta ttaaatcaaa ctcttctgca gtgatttgat
    17461 tgaacaatgt ctctttcata ttacttatac gaaattccaa agcttcacta cgctttaaat
    17521 aatctgctgt taatggtttc aattgttcat taaaacgaaa ctgtacacgt attttatttt
    17581 gtgcacctgt ttcaacacta ataatttcac cacatccaag tagtccagta tccgtctgaa
    17641 cttgataaaa gatgacttga tctcctactt tagccttttt aaacgctcta aatccttgag
    17701 atgggttaaa atgtgcgcct gattcaaata aagctgtttg tcctactaac ggttcattat
    17761 gattccaacg gttatatcca caattcaacc aaaaataatt cgtttctgct gtcatcttaa
    17821 tactccttaa cctgaataaa ttttagaaac actatgaatt acattctttt agtgtttctt
    17881 atgcagttgg acgcgtatgc gaacaactgt ataccctttg ttcactgcga ttttaatcgc
    17941 atttcctata acattgtagc gcccaggaca ttaatttacg tcccagaccc ttatcgtttt
    18001 cacttctaag taagtcgaac tattttgctt tacaacaagt gcgactctaa atacagttgg
    18061 acacacatac gagcaactgt atacctttta atcagttttc tatattttat ttattatatc
    18121 tgtcttaatg ataaaaattg ttacaaacag tttaacatat ttagctacct attttgcata
    18181 taaaaaacat gcttgcatac actatgcaat aaaaattaca aatttatata tgataccact
    18241 atgcttgctt atctctatag cgccattgat acacattttt aaatatctat actgccgtta
    18301 gaattttatc atgtcttaat tttcattaaa tattaattac ttcattttat ataaaccaac
    18361 aaaaaccccc tcactactat gcaagtgaga ggttatgttg atgtgcttta ttttcatcaa
    18421 tgtcattaac acaatcatat ttcttctgtt aatgcactgt attatattca aacgcgctat
    18481 cgacaattaa tttgaagcta caaaggtacc gcataatggc agcacattaa ttaacaatgc
    18541 gctaaacttt aatgaggcgc tgatttgctt gtctttaaaa gtcaacatag cactgataat
    18601 tcctaaaata gctactatac gtggaattgt catgctcgga tactgcggta tatgtaagaa
    18661 agcaccaaga cctgctatca caccacatac taacgcaata tatagaaatt gcttcaaatc
    18721 attcactcct aaattgttat tacactatta cacatagcta atcatcaatg tgaaatcacc
    18781 ttcaaagaca ctatccaaat cttcagaagt caaaataaag tttgtaccag tagtcagttt
    18841 gaaaatttca ccatcgacaa tcatttgccc ttcgccttcc aacactgtaa ctaaacagaa
    18901 ctctctaggc ttcatataat ttaacgtgcc agaaatttcc catttaacca atgtaaagaa
    18961 atcattcgat acaatgtgtg tacacttatg gttttcaata atttcgcttt caggcaaaat
    19021 attaggtaat ggtgcattgt actgaataac gtctaaagct ttttcaatat ttaacggtct
    19081 atcattatat tgattatctt gacgattgaa atcataaagt ctatatgtaa tgtctgacga
    19141 ttgcatcgtt tcgtatgcta atattcctga agaaatagta tgtactgttc ctgctggaat
    19201 aaaatagaat tctccaggtt ttactttaat atatctaagt atcgactcta tcgttccgtg
    19261 ttgaacatga ttcgcaactt cttctctaga ctctgctaat gtccctataa ctatttctgc
    19321 atcttcttct gcatctataa tataccaaca ttcagatttg ccatattgcc cgttttcatg
    19381 ctcataagca taagaattat cagggtgcac atgaatagaa agtgattctc ttgcatccac
    19441 tattttagtt agaagcggaa aatctttgct tgggaaatca ccaaacaatt cacgatgttc
    19501 tgaccaaata cggtctaatg tttgaccttg atatggtcca ttaataatct cgctcgtacc
    19561 atttggatgt gctgacacac accaacattc cccagttgta tcattgtcta attgatatcc
    19621 aaactcactt agacgttgac cgccccataa ttttgttttt aaaattggtt gtaaaaataa
    19681 tggcattgtt gcacctccat tgtgattaag taagcaatag aactctgatg ttgttgttcc
    19741 attatatttt gattttgttc tcatttacat cgtattatta acttccacat ttcaaattaa
    19801 ctattagtga ttgtaccata tttactaaca ttgcagtact gccaattaaa gcgcttcact
    19861 taaatttaca gtactttaac attttcaaaa atttatagca tagagattat atctctctta
    19921 catttgtaca tatttccctt taaatttact cgcccattat accaattaat aaacaacttt
    19981 aatagttgtg ccatacattg ttcaaattct ttgtaaaacg catagacaat acgtacttat
    20041 tcatacttat aattcatcat tttcaaaaaa taacgagtta cgaaaaagta acccgcttca
    20101 aatcatattt actatcctta ttaatccgtt tcattttcaa attgagttaa agcatcttta
    20161 atgtcctgat caccactaat aatttgaaac tcttggtgat taaaatgatt ggatgtgaca
    20221 atttctttta atactgtcgc aacatcttct ctaggaattt cacctttacc atcaaaatat
    20281 tgtgcagctt ctatctttcc agatcctgct gcatttgtaa gtgcccctgg atgtaaaatt
    20341 gtataattca aacctgaacg tcttaaatag tcatcagcgt aatgtttagc tattgtatat
    20401 ggctttaaat caccgctatc atcaaaagcc tgacgtctcg aatcatatgt tgaaaccatg
    20461 acatagtgtt taatattggc ctctttactc gcaatcattg atttaacagc accatctaaa
    20521 tcgacaataa ttgttttatc tgcacccgtg ttccctccag aacctactga aaagataact
    20581 ttatcgaatg gtttaaacgt ctcagttaaa gtctctattg aatcattttc aacatcaaca
    20641 agaattgctt tcataccttg tgattttaac gcattaagtt gatctgattg cctaacacca
    20701 gcagtaaatg gtacattttc ttttgctaat tgttgcacta gtaacgaacc tacaccgcca
    20761 ttagcaccta taaccaaaat attcatttac aacactctcc tatttattat tctctatgcc
    20821 ataccacttt atgagatatg taaaacttgt tacaactata aaaatcaatt gacatactac
    20881 tgggaacgta ttaaattaat atatgaacaa atattcatat gaaaggattg tcatataatg
    20941 tcagaacaat attcagaaat aaatacagat acattagaac gcgtaactga aattttcaag
    21001 gcattaggcg attacaatcg aatacgtatc atggaattgt tatcagtcag cgaagcaagt
    21061 gttggtcaca tttcacatca attgaattta tctcaatcaa atgtctcgca ccaattaaaa
    21121 ttacttaaaa gtgtgcatct tgtgaaagca aaacgacaag gccaatcaat gatttattca
    21181 ttagatgaca tccacgtagc aactatgtta aagcaagcca tacatcacgc gaatcatcct
    21241 aaagaaagtg ggttataata tgtctcattc acatcatcat catgaccata tgcatagtca
    21301 tgtaactaca aataataaga aagtattgtt tatatcgttt ttaataatcg gtctatatat
    21361 gtttatcgaa atcatcggcg gtctccttgc taacagcttg gcattactat ctgacggtat
    21421 ccatatgttt agcgacacat tctcattagg tgttgcactt gtcgcattta tttatgctga
    21481 aaagaatgcc acaactacaa aaacatttgg ttataaacgt ttcgaagtac tcgcagcgtt
    21541 atttaacggt gtaacgcttt ttgtaataag tattttgatt gtttttgaag cgattaaacg
    21601 tttctttgtt ccttctgaag ttcaatcaaa agaaatgtta atcattagta ttatcggttt
    21661 aattgtcaat atcgttgttg cattctttat gtttaaaggc ggcgacactt cacacaattt
    21721 aaatatgcgt ggtgcttttc tacatgttat cggagactta ttaggttcag ttggcgccat
    21781 tactgcagct attttaattt gggcatttgg atggacaatc gccgatccta tcgcaagtat
    21841 tttagtttcc gttattattt taaaaagtgc ttggggtatc acaaaatctt caattaacat
    21901 tttaatggaa ggcacaccaa gtgatgttga tatagatgaa gttataacta ctattaaaaa
    21961 ggattcacga atacaaagtg tgcatgattg ccatgtttgg acaatttcaa atgatatgaa
    22021 tgcattgagt tgtcatgttg ttgtagacca tacattgaca atgaaagaat gtgaattatt
    22081 attagaaaac attgagcatg atttattaca tttaaatatt caccatatga ctattcaatt
    22141 agaaacgcct aatcacaaac atgatgaatc gattatatgt tcaggaacac atagtcattc
    22201 acataaccat catgctcatc atcacgcgca tgtacattaa taattttaac ctactgccat
    22261 tgcatcgatt aaacttttca atggcagtag gttttttatg tctttatggc gacttgtttg
    22321 gtctttgatg atgcaatgtt tattaacaaa ttttcaacta ttatttctta cattagtcat
    22381 atttttgaca atttactatt ataattctct aactttagtc actttaatta atttttatta
    22441 gatattaata tgaaaataac gtgttttttg ttattgtatt tatatgaaga aaaggaggca
    22501 ccactttgtt tacttacttt aaatcagcat ttaaaaatgc taaaccacaa ttattaataa
    22561 cattgatata tgcacttata gcatttgctg taattgcagt tgtatattta cttgctaatt
    22621 tccagcttgc taagtatgca caaactattg caatttattc acaatttggg caaaaaccac
    22681 cagtagatgc atatttaaaa gttatcgctg tattacttat agcagctgta gtttcactgt
    22741 ttgttttagt tcaaattttt atcggaatta caaatgttat gaaacgagca atgagtcatg
    22801 aaaaagtaaa atttaccgat ttatttattg catttaaaaa aggtaattat ttaaagagcg
    22861 ttctgatcgg tcttgtatct atagcaatga ttatcgttct ttcacttctg acatcattac
    22921 tatacaaatt attttctcca gtatcagaaa tgattatgaa ttcagtacaa tcatcatatg
    22981 cagatagtac acacctgatt ggtattgcta ttacaactca aagcatcata atcattgttg
    23041 ttttattgat taaagcaatt attacttggt tattgttaat acctattttc aactttatga
    23101 ctagtttcgt tgaatcaact aacgataaag taaaaacaca cttagctaat ggatttaaag
    23161 caatgaaaaa tggtcaaaaa acatttttca aatttttcat tggaatacta ttattaaact
    23221 taattattat tttatttaaa acacctgttg gttacttgat ttcatttaat acgcaatcac
    23281 tctctcaaag tgttgcagaa aatatcataa gagtttatac agtaatgaca attattttat
    23341 tcgttgttat tcatgcaatc attttaatgg gtatcgttca atattactta aaacgtggtc
    23401 aaaaaattac taaagataaa gtaaaaacag ctgacaagaa taaaaaagtt gtcactgaac
    23461 caaaaaatac aaaagtagaa aatgataaag tgacaacatc tgttgaaaca aaaacagaaa
    23521 aagcacaaga ttcattaaat gataatacaa caaaaacaat gacttcagat aaaccagaag
    23581 acaatcaacc aaaataaatt ttagagcccc ttacaacttt agttgttagg ggctcttatg
    23641 catgcgctta gcgcaggcgc tcctactttt aaactttagt tgttaggggc tcttatgcag
    23701 ttgatgcgta gcatccaact gtgttcctct atttttcaac tttagttgtt aggggcttct
    23761 ttctaaaata actaagtgaa ttatctatat atgaagaggt ctccaatact ttttatataa
    23821 ttcgtgatta cattctatac ttttaattgt attttctgct gtatggaaag ttggttttat
    23881 taattctgat tatgttcaga actacaattc ataagaaaaa tgtgttaaaa tatatttgta
    23941 gtaagtagaa gcaaaagatg aaaatcatta actcttgaaa cacaaaaagg gcaacactcg
    24001 gaaacatgtt accctaatga gcccgttaaa aagacggtga ccttatattt tatttaaaaa
    24061 tagccttcaa aaatgccggt caaagcgaat agaaggttat tttttatggt cttgagtact
    24121 aatcaatact aaaccaatga ttgttaatac aaccataagc atttcaaaat cagacatgct
    24181 agtcctttct aggagtaaca actataacca taggcatcac ccctttatta agagattagc
    24241 caccatctat ccaacttgct caataaatat tataacatgc acacttttaa acagtaattc
    24301 atagtataag ttttttcatt tcttaatcaa ctcgataaac agttgagtga catacccttg
    24361 tctaactagc tatttcttcc cctgttatcg tttgttcatc atataaaaat ttaatttctc
    24421 attttttatt ctctggtaaa gaggggcgcc cgctttttcg gcctctcgct cttgttgctg
    24481 ctaagtctat tttatacact cacatagtaa attaacttct aatcctgaaa aatgcactca
    24541 tcatcgtaaa aaacattttg cccattgtgt ctttcgttga aatgttcatg ttactaattt
    24601 gtaagtcaat tccgttatca tcgaatcatt gtgataattc aattaatagt tttgtcgttc
    24661 tacctaaccg atcaagttga tagacaacta atgtgtcgct ctctcgtaaa taatctaaac
    24721 acttaacaag ctctgtacgt ttgacaccac ttattctttc actatataca cacccacacc
    24781 caaattcttt aagtgtatcg atattaatct ttcgttgata cacgatcata accaatttta
    24841 gccatttaaa taaaacctct cttcaacata ttatatttag ttatgactca aaactcattg
    24901 ccgtattttt gattttgtat taatatatca aggctatcat catctaatac caaatgaatt
    24961 tctccacttc gaatatcaat agcaacgttt atttttgatt ctaacttttt caaataatct
    25021 atgtcagtaa atatgtactt agaaagataa tcatcttctt ttttaaattc ttctttatca
    25081 attgtatatc cgttctctaa aatttttgat aactctataa gagtattact cctactttct
    25141 ttttttacat tagacactac atagtttatg aacttttcaa tcaattgttc ttccaaatca
    25201 ctataatctt gtgtgtcctt tttaaataat tcaaacataa tattattgga taaattttca
    25261 ttatatatta atcgctcgta cataccagaa gcgctagagt tgataaatct attcagatcg
    25321 ttttgtattt cgttcaaatc tatattccct ttactatcgt aatatgaata attactcatt
    25381 aattttttta agaaatctct caaaccaaag taaagataaa tatttgaata ctttctggca
    25441 ttatcgtagt cttttacatc tcttttatag tgatctatca acatattcaa ttcgaaatta
    25501 tatccatgat taaaatcaaa ctcgccattg tcatattttc tttgaaattc aaacttgtat
    25561 atttctgcaa ctttatcatc gcaattttca tctatatagt tttcaaccaa ataataagca
    25621 cgctcaagag aaatttcacc ataactttgt ataaaagagg ttaagtactc tgttttcttt
    25681 aaaatttctt ctcctttctt agttggtata tatacatatg gtaaatctaa gttattaata
    25741 atatgaaaat tgtcgtcaat acgtttaatt aagtcaggtt tattacctgt tgtttttata
    25801 ccaaaacttt ttaaaatact ttgtaattca ggtcttgtct ttttatatat actaacttca
    25861 aaatcattag tcgttgttaa taactcagct tcaattaatt tttttattga attcataatt
    25921 tgaacatcat tattagcaag gcacttatta gcaaatatct cttctccaac caatctattt
    25981 acattagtgt gtaatactaa taaatcacgt gcatttacgc tcactagctt tcatctcctc
    26041 atttttgctt ttcaaattta ttaagtatga ataaaaaata catccgaaca aacaaaatct
    26101 ctatattcta attcgattta catagattat acactaaaaa aatgattctc aatgcaaatg
    26161 aatgtgtctc tcatagtcta aaaactcgta tgtttcgaat
//
LOCUS       DALPQQ010000022        24403 bp    DNA     linear   BCT 22-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus strain K18-6-464
            SAMD00233528-rid16434743.denovo.022, whole genome shotgun sequence.
ACCESSION   DALPQQ010000022 DALPQQ010000000
VERSION     DALPQQ010000022.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMD00233528
            Sequence Read Archive: DRR236061
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 24403)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 24403)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001543423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001543423.1
            Genome Coverage       :: 77x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/22/2022 17:09:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,811
            CDSs (total)                      :: 2,743
            Genes (coding)                    :: 2,689
            CDSs (with protein)               :: 2,689
            Genes (RNA)                       :: 68
            rRNAs                             :: 2, 4, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 4, 2 (16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 54
            CDSs (without protein)            :: 54
            Pseudo Genes (ambiguous residues) :: 0 of 54
            Pseudo Genes (frameshifted)       :: 27 of 54
            Pseudo Genes (incomplete)         :: 27 of 54
            Pseudo Genes (internal stop)      :: 10 of 54
            Pseudo Genes (multiple problems)  :: 10 of 54
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..24403
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMD00233528-rid16434743.denovo.022"
                     /strain="K18-6-464"
                     /db_xref="taxon:1280"
                     /geo_loc_name="Japan: Niigata"
     gene            <1..1143
                     /gene="secY2"
                     /locus_tag="O7798_000832"
     CDS             <1..1143
                     /gene="secY2"
                     /locus_tag="O7798_000832"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501438.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="accessory Sec system protein translocase subunit
                     SecY2"
                     /protein_id="HDC2863101.1"
                     /translation="LFIYILGTNISIVSYNDMQVKHESFFKIAISNMGGDVNTLNIFT
                     LGLGPWLTSMIILMLISYRNMDKYMKQTSLEKHYKERILTLILSVIQSYFVIHEYVSK
                     ERVHQDNIYLTILILVTGTMLLVWLADKNSRYGIAGPMPIVMVSIIKSMMHQKMEYID
                     ASHIVIALLIILVIITLFILLFIELVEVRIPYIDLMNVSATNMKSYLSWKVNPAGSIT
                     LMMSISAFVFLKSGIHFILSMFNKSISDDMPMLTFDSPVGISVYLVIQMLLGYFLSRF
                     LINTKQKSKDFLKSGNYFSGVKPGKDTERYLNYQARRVCWFGLALVTVIIGIPLYFTL
                     FVPHLSTEIYFSVQLIVLVYISINIAETIRTYLYFDKYKPFLNQYW"
     gene            1154..2707
                     /gene="asp1"
                     /locus_tag="O7798_000833"
     CDS             1154..2707
                     /gene="asp1"
                     /locus_tag="O7798_000833"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501437.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="accessory Sec system protein Asp1"
                     /protein_id="HDC2863102.1"
                     /translation="MKYFIPAWYDDQRWWQDTTVPYYQLQNKTEFDDMISLMGMHLEN
                     DLDYQLIVLNHAPNLRTFLHRYDLYETKYSSVFDEIQGFSHHAPQAINYHHLKWPDDV
                     EFVYTPYLLKCVTSEQTYTNIYFSQEGYSIWFEEFERDQLQRRYIFDDRGYLSAIRYF
                     DDQGEASYQEYLTINGDCVLHEDLKNGRVTVSKRYQHHYQQTEYNNMAQLIEEKFQAM
                     IAQQIHEDDHVIVASDARHNRQIANHIPAKSLSYSFFKNRNETVSDEEYQSIVKNAHL
                     IVDSVQLERDLISHQEKYQRENTMIRITPFETRQSPNISSQLMETFIGVWIDGMSDAD
                     LQQMMQRLVDYIAQEDYYRLILLSRHQNDIPMWLRECITSVNEEYQAKQNADVNVSAL
                     MTPEDQDDIIAVKTIHAEHDVVEALRTLRLVIDMSKEPDLYLQISAISAGIPQINGQQ
                     TDYVSDYDNGRIINTVDELDDALNYYLFYLKNWNYAYAYSLKLIDAYASKNIINQLDE
                     LIEGENDAT"
     gene            2697..4265
                     /gene="asp2"
                     /locus_tag="O7798_000834"
     CDS             2697..4265
                     /gene="asp2"
                     /locus_tag="O7798_000834"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501436.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="accessory Sec system protein Asp2"
                     /protein_id="HDC2863103.1"
                     /translation="MPRKFRVLQIGGDDLEPIFQHKKGVSWDYFDIGLFEFDSGYVEA
                     IEAIVEAEGRFDFIYIQAPYSETLTNLLQMISEPYNTYVDESFWSVEYEQDENVQKYV
                     VQPLHYRNIEERNNKLEAVSFSGQYGDKVSPKLALVHPNFKGDVVYQGNSELTLSGEF
                     GKEFKPIASWQNNLVYDKDKVIQIWPEFDIDGAVELQYTFRLIQTGADGALIEQIVLT
                     DDMLDSPLEIPAKPFDAYISVTVKARGNGTVHLGPIHKRWSRLDMGQFLLGGSRFVDS
                     QRQEFIYYFHPGDMKPPLNVYFSGYRTAEGFEGYYMMKRMNAPFLLIGDPRVEGGSFY
                     IGSSEYEQGIINVIDETLEKLNFKSHELILSGLSMGSFGALYYGAQLNPQAIIVGKPL
                     VNIGTIAEHMRLLRPEEFGTALDVLVSNEGDTSQASIQALNQKFWQTFQKKSLSQTVF
                     AIAYMQHDDYDPHAFQELLPVLTAHQARVMNRSIPGRHNDDSPTIASWFVNFYNIILE
                     DKFGRVQHAEKQNI"
     gene            4243..5202
                     /gene="asp3"
                     /locus_tag="O7798_000835"
     CDS             4243..5202
                     /gene="asp3"
                     /locus_tag="O7798_000835"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501435.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="accessory Sec system protein Asp3"
                     /protein_id="HDC2863104.1"
                     /translation="MLKNKTFKVTWNYISQTTFMYGSKVSFSNGEVTFINPLMPSGLP
                     IHEWLMLKQFSKYKSAPSLPILRRGQHYKLHFDFDATPAGSVYFIIIFYNKNGTKLST
                     EIVKSNSITIQYPDEAYAYKIKMMNAASTSLIFRCLTITEMTHQYDLEYKSMRVTKIG
                     DDQYGNDMINVIIAEPSDTYPTISNDFLKLFGHVWLVERWMDDNIEGNIKQLKNDLQS
                     QDTLKAINLISYGSKSNVFATYVAQHLGCKVYRTSHEDDDLKGWLTEHVPGNHELKDT
                     NVEVYFKEEQDKHLNYMSRLMNPVRFLDYLDVSKLNGGEVNET"
     gene            5192..7582
                     /gene="secA2"
                     /locus_tag="O7798_000836"
     CDS             5192..7582
                     /gene="secA2"
                     /locus_tag="O7798_000836"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501434.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="accessory Sec system translocase SecA2"
                     /protein_id="HDC2863105.1"
                     /translation="MKHKLDVTINELRLKSIRKIVKRINTWSDEVKSYSDDALKQKTI
                     EFKERLASGVDTLDTLLPEAYAVAREASWRVLGMYPKEVQLIGAIVLHEGNIAEMQTG
                     EGKTLTATMPLYLNALSGKGTYLITTNDYLAKRDFEEMQPLYEWLGLTASLGFVDIVD
                     YEYQKGEKRNIYEHDIIYTTNGRLGFDYLIDNLADSAEGKFLPQLNYGIIDEVDSIIL
                     DAAQTPLVISGAPRLQSNLFHIVKEFVDTLIEDVHFKMKKTKKEIWLLNQGIEAAQSY
                     FNVEDLYSEQAMVLVRNINLALRAQYLFESNVDYFVYNGDIVLIDRITGRMLPGTKLQ
                     AGLHQAIEAKEGMEVSTDKSVMATITFQNLFKLFESFSGMTATGKLGESEFFDLYSKI
                     VVQVPTDKAIQRIDEPDKVFRSVDEKNIAMIHDIVELHETGRPVLLITRTAEAAEYFS
                     KVLFQMDIPNNLLIAQNVAKEAQMIAEAGQIGSMTVATSMAGRGTDIKLGEGVEALGG
                     LAVIIHEHMENSRVDRQLRGRSGRQGDPGSSCIYISLDDYLVKRWSDSNLAENNQLYS
                     LDAQRLSQSNLFNRKVKQIVVKAQRISEEQGVKAREMANEFEKSISIQRDLVYEERNR
                     VLEIDDAENQDFKALAKDVFEMFVNEEKVLTKSRVVEYIYQNLSFQFNKDVACVNFKD
                     KQAVVTFLLEQFEKQLALNRKNMQSAYYYNIFVQKVFLKAIDSCWLEQVDYLQQLKAS
                     VNQRQNGQRNAIFEYHRVALDSFEVMTRNIKKRMVKNICQSMITFDKEGMPVIHFP"
     gene            7600..9108
                     /gene="gtfA"
                     /locus_tag="O7798_000837"
     CDS             7600..9108
                     /gene="gtfA"
                     /locus_tag="O7798_000837"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501433.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="accessory Sec system glycosyltransferase GtfA"
                     /protein_id="HDC2863106.1"
                     /translation="MTIYNINFGIGWASSGVEYAQAYRAKLLRRTNQDTKFVFLDFIQ
                     SENIQTLTQNIGFKDQEVIWLYQYFSDISLAPTTYTLDDIERELGHDISFRERNGKIV
                     RLYFNGKSSFVTCYLQNEQKDIVDRAEFVINSMLVRKDFYSYTRIFSEYYAPADNKAK
                     LYMRQFYNQDGSIAYNEYIDGDSSIYVFEDAVLYNKTEFIAYFLQRLNLTRDDIVILD
                     RASDIGQAVLQHKGDSKVGVVIHADHYSNNMMSEQHILWNNYYEYQFSKAKYIDFFIT
                     ATDIQNHMVCRQFEQYQGYRPRVYTIPVGSIDALSYPTLSRKPYAMISASRLANEKHI
                     DWLVKAVIVAKRQVPELTFDIYGEGSEKTRLRKIIDTHRAQDYIRLLGHVKLDEIYND
                     YELFLSASTSEGFGLTLMEAVGSGLGMIGLNVNYGNPTFIRDGENGYLVPFDTDEDSV
                     DDVIAKLAHAIVMYFNNGPQTPHDISYEVAQQFMTQDIILKWETLVQEVLHD"
     gene            9101..10459
                     /gene="gtfB"
                     /locus_tag="O7798_000838"
     CDS             9101..10459
                     /gene="gtfB"
                     /locus_tag="O7798_000838"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501432.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="accessory Sec system glycosylation chaperone
                     GtfB"
                     /protein_id="HDC2863107.1"
                     /translation="MIKLFDYFNDHSRKLYESFKASKLEEDLTIVLNDNGFLPDDVIS
                     PYQFFADNHNTENMKPRFFNQVTVPAFWEIKGNNNSATINDMGRLRGKIFYQSGERPR
                     IVSRVEWFDDQQRVRFVDYYSKNGIKFAQTVYDLNRKAILKKYMTAEGKEVIYENFVT
                     SDVILDWQGKSYFFPSKLAFALFFIKQLEITEHHFVINSLALPFSVLYNLPSKGSDVL
                     VWQEHCNGNVPGNMQLMCKGDMKRHCNIIIPDKNEYETMLNIADAKVQSRILQGGYLY
                     NYRSRNRYTKEIVILTNSDQLRNIKVLVETLPDFKFHIAAITEMSDKLMQLDQYANVH
                     LYPSINIDRVNELYQLCDIYLDINEGNEILNAVEQAFDYELLILGYRQTAHHAKVTLS
                     EHLFEHNDEITMESKDQLIQMLESLKDQQQFRDALLAQKAHAHEISREQFEQVFKQAL
                     ES"
     gene            10701..12608
                     /gene="sasF"
                     /locus_tag="O7798_000839"
     CDS             10701..12608
                     /gene="sasF"
                     /locus_tag="O7798_000839"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501431.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell-wall-anchored protein SasF"
                     /protein_id="HDC2863108.1"
                     /translation="MAKYRGKPFQLYVKLSCSTMMATSIILTNILPYDAQAASEKDTE
                     ITKEILSKQDLLDKVDKAIRQIEQLKQLSASSKEHYKAQLNEAKTASQIDEIIKRANE
                     LDSKDNKSSHTEMNGQSDIDSKLDQLLKDLNEVSSNVDRGQQSGEDDLNAMKNDMSQT
                     ATTKHGEKDDKNDEAMVNKALEDLDHLNQQIHKSKDASKDTSEDPAVSTTDNNHEVAK
                     TPNNDGSGHVVLNKFLSNEENQSHSNRLTDKLQGSDKINHAMIEKLAKSNASTQHYTY
                     HKLNTLQSLDQRIANTQLPKNQKSDLMSEVNKTKERIKSQRNIILEELARTDDKKYAT
                     QSILESIFNKDEAVKILKDIRVDGKTDQQIADQITRHIDQLSLTTSDDLLTSLIDQSQ
                     DKSLLISQILQTKLGKAEADKLAKDWTNKGLSNRQIVDQLKKHFASTGDTSSDDILKA
                     ILNNAKDKKQAIETILATRIERQKAKLLADLITKIETDQNKIFNLVKSALNGKADDLL
                     NLQKRLNQTKKDIDYILSPIVNRPSLLDRLNKNGKTTDLNKLANLMNQGSDLLDSIPD
                     IPTPKPEKTLTLGKGNGLLSGLLNADGNVSLPKAGETIKEHWLPISVIVGAMGVLMIW
                     LSRRNKLKNKA"
     gene            12776..13336
                     /locus_tag="O7798_000840"
     CDS             12776..13336
                     /locus_tag="O7798_000840"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501430.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine hydrolase"
                     /protein_id="HDC2863109.1"
                     /translation="MSRKTALLVLDMQEGIASSVPRIKNIIKANQRAIEAARQHRIPV
                     IFIRLVLDKHFNDVSSSNKVFSTIKAQGYAITEADASTRILEDLAPLEDEPIISKRRF
                     SAFTGSYLEVYLRANDINHLVLTGVSTSGAVLSTALESVDKDYYITVLEDAVGDRSDD
                     KHDFIIEQILSRSCDIESVESWKSSL"
     gene            complement(13603..15462)
                     /locus_tag="O7798_000841"
     CDS             complement(13603..15462)
                     /locus_tag="O7798_000841"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501429.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amidase domain-containing protein"
                     /protein_id="HDC2863110.1"
                     /translation="MPKNKILIYLLSTTLVLPTLVSPTAYADTPQKDTTAKTTSHDSK
                     KSNDDETSKDTTSKDIDKADKNNTSNQDNNDKKFKTIDDSTSDSNNIIDFIYKNLPQT
                     NINQLLTKNKYDDNYSLTTLIQNLFNLNSDISDYEQPRNGEKSTNDSNKNSDNSIKND
                     TDTQSSKQDKADNQKAPKSNNTKPSTSNKQPNSPKPTQPNQSNSQPASDDKANQKSSS
                     KDNQSMSDSALDSILDQYSEDAKKTQKDYASQSKKDKNEKSNTKNPQLPTQDELKHKS
                     KPAQSFNNDVNQKDTRATSLFETDPSISNNDDSGQFNVVDSKDTRQFVKSIAKDAHRI
                     GQDNDIYASVMIAQAILESDSGRSALAKSPNHNLFGIKGAFEGNSVPFNTLEADGNQL
                     YSINAGFRKYPSTKESLKDYSDLIKNGIDGNRTIYKPTWKSEADSYKDATSHLSKTYA
                     TDPNYAKKLNSIIKHYQLTQFDDERMPDLDKYERSIKDYDDSSDEFKPFREVSDSMPY
                     PHGQCTWYVYNRMKQFGTSISGDLGDAHNWNNRAQYRDYQVSHTPKRHAAVVFEAGQF
                     GADQHYGHVAFVEKVNSDGSIVISESNVKGLGIISHRTINAAAAEELSYITGK"
     gene            15673..18654
                     /locus_tag="O7798_000842"
     CDS             15673..18654
                     /locus_tag="O7798_000842"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501428.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YhgE/Pip domain-containing protein"
                     /protein_id="HDC2863111.1"
                     /translation="MKNAFKLFKMDLKKVAKTPAVWIILAGLAILPSFYAWFNLWAMW
                     DPYGNTGHIKVAVVNEDKGDTIRGKKVNVGNTMVNTLKKNKSFDWQFVSREKADHEIK
                     MGKYFAGIYIPSKFTHEITGTLRKQPQKADVEFKVNQKINAVASKLTDTGSSVVVEKA
                     NEQFNKTVTRALLEEANKAGLTIEENVPTINKIKNAVYSADKALPKINDFANKIVYLN
                     NHQADLDKYANDFRKLGNYKGDILDAQKKLNEVNGAIPQLNEKAKLILALNNYMPKIE
                     KALNFAADDVPAQFPKINQGLNIASQGIDQANGQLNDAKGFVTQVRSRVGDYQDAIRR
                     AQDLNRRNQQQIPQNSAANNETSNSAPAAGNGVASTPPSAPSGDTAPNNNVTQNTAPN
                     SNNAPVSTTPQSTSGKKDGQSFVDITTTQVSTANENTQNITDKDVKSMEAALTGSLLS
                     LSNNLDTQAKAAQKDSQALRNISYGILASDKPSDFRESLDNVKSGLEYTTQYNQQFID
                     TLKEIEKNENVDLSKEIDKVKAANNRINESLRLVNQLSNALKNGSSGTAEATKLLDQL
                     SKLDSSLSSFRDYVKKDLNSSLVSISQRIMDELNKGQTALSNVQSKLNTIDQVINSGQ
                     AILKNGKTRIDRLQTVLPSIEQQYISAVKNAQANFSKVKSDVAKAANFVRNDLPQLEQ
                     RLTNATASVNKNLPTLLNGYDQAVGLLNKNQPQAKKALSDLADFSQNKLPDVEKDLKK
                     ANKIFKKLDKDDAVDKLIDTLKNDLKKQAGIIANPINKKTVDVFPVKDYGSGMTPFYT
                     ALSVWVGALLMVSLLTVDNKHKSLESVLTTRQVFLGKAGFFIMLGMLQALIVSVGDLL
                     ILKAGVESPVLFVLITIFCSIIFNSIVYTCVSLLGNPGKAIAIVLLVLQIAGGGGTFP
                     IQTTPQFFQNISPYLPFTYAIDSLRETVGGIVPEILITKLIILTLFGIGFFVVGLILK
                     PVTDPLMKRVSEKVDQSNVTE"
     gene            complement(18766..19704)
                     /gene="manA"
                     /locus_tag="O7798_000843"
     CDS             complement(18766..19704)
                     /gene="manA"
                     /locus_tag="O7798_000843"
                     /EC_number="5.3.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501427.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="mannose-6-phosphate isomerase, class I"
                     /protein_id="HDC2863112.1"
                     /translation="MALFLQPVFKDRIWGGHALKAFNYDIPNETTGECWAISAHPNGP
                     NTIINGPYKDMTLDQLWSQHRELFDNDSRDSFPLLTKVLDANDKLSVQVHPDDDYALK
                     HEGELGKTECWYILDAAPGAEIIYGVHAHNKQTLIDMIDNHEFDSLFKRIPVKPGDFY
                     YVPAGTVHAIGSGILILETQQSSDTTYRIYDYDRRDQNGQLRDLHLEQSKDVIELGNH
                     EPNTTPITTHIDTHTVTQFVDNQYFAVYKWDIHGDLKFNKPHAYCLVTIIDGTGTLTV
                     NDKHYDIQKGSSFILTTEDEDIHFVGNISAIVSHPG"
     gene            complement(19718..21670)
                     /locus_tag="O7798_000844"
     CDS             complement(19718..21670)
                     /locus_tag="O7798_000844"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501426.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS fructose transporter subunit IIABC"
                     /protein_id="HDC2863113.1"
                     /translation="MKIVAITSCPNGIAHTYMAQEKLEQVAKEMGVDIKVETQGGVGA
                     ENVLTTQDIEEADGVIIAADKQVDLSRFVGKRLINENVREGIHNPRGLIQRIINQDAP
                     IYQSETNYHSKDRGKSKSGIQMVYQHLMNGVSFMVPFIVVGGLLIAIALTLGGETTSK
                     GLVIPDDSFWKSIENIGSLAFKFMVPILAGYIAVSIADKPGLVPGMIGGAIAADGSFY
                     GSDAGAGFLGGIVAGFLAGYIAKWIKDIKVPKAMAPIMPIIIIPIISSVVVGLIFIFL
                     IGAPISNIFEALTTWLKSMQGANIIILAMIIGAMIAFDMGGPVNKVAFLFGSALIAEG
                     NYAVMGMVAVAVCTPPIGLGLATFVQKYKFNHSEREMGKASFTMGLFGITEGAIPFAA
                     QDPLRIIPANIIGAMIASVIAAIGGVGDRVAHGGPIVAVLGGIDHVLWFIFAVIVGSL
                     VTMTTVLLLKRNTPVIAVDAPAQHTQLHDTDITQHDTEVDNVDNTAKHSHLNKPSHVF
                     DQQTMIITDHDMSRNEAIDMLIHKLKICRYVEHTSHLKNAILEREMESTTAIGMNVAI
                     PHAKSDVVKQPIVAVMKNNHGVKWDSLDGSLPQLIFLIAVPNNSQDTHLKILQRLSKA
                     LMNDETRQSLINANSTTEIYNLLMKI"
     gene            complement(21747..23621)
                     /locus_tag="O7798_000845"
     CDS             complement(21747..23621)
                     /locus_tag="O7798_000845"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501425.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BglG family transcription antiterminator"
                     /protein_id="HDC2863114.1"
                     /translation="MLDRHLKLLQFFIKNPSKHISSNEIAKHVNVSNRTVRNDIHVIN
                     SNFMDDIIVSIKSKGYQLNTSQYTLETITERYTHIQSYKEKLLLSMAYQLLMHNKSQT
                     LQQLEQDYLLSKTVLNDYFVRIQQWCQKFNIALTIKKKQGIVVDGTDNDITNAIIHLN
                     QLSSGHVHVEDLILNELPDSHQRMISHIIQETLQQHSIETTDIQIQQLLIHLILIIKR
                     KQSLSELDTLNHDSKLISQSCIKQINERLGYDLNEKVINMFSFFIAYHFNKLDIGIER
                     IFIQSYIDRLIELMQQRIHVPFNEDSILQQNLYNHFSKAYLRITQNIYLNNPLVIEIK
                     KLYPFVFNTLFEAIDKLAIDTDIEMSEDEIAFLTIHFQAAIERRTKTQLNVVIACYYG
                     LGVSNFLETKINNLSEELSVINTIKLENITHYHFDNVDLLITTHDIPKQTLNILPKHL
                     TTIKVAPLFSEDDRHKIRHVVKQKQNPVQAHHHMDTVNFLVVNTEQKSRHTVQIFEEA
                     QKILQAHHAIVEGYIESALEREKSSSTYIGNFMAIPHGDPEKVLQSHVLIFRTKDVFP
                     WRQHDVKLVFFLAISHKDKAFTKQMMQLIANLDDDSVNHLCSLDDHSLKQQLFEYLQE
                     "
     gene            complement(23861..24319)
                     /locus_tag="O7798_000846"
     CDS             complement(23861..24319)
                     /locus_tag="O7798_000846"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501424.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDC2863115.1"
                     /translation="MKKLLITIVIIVLIGALGFAIYAAINHSTSSSNNQEQENKSTHK
                     KTETEENDQQDDSADKTDKNQNNGNNVTNDNQPSSPSNVPNNHSTVPSNTQPAQPKDS
                     NSNKNNTHGGGSQSSTNNQNNQQQNTPPANKSNNTNTPSKQTPQAQSPKN"
BASE COUNT         8298 a         3620 c         4585 g         7900 t
ORIGIN      
        1 ttgtttattt atatattagg cacaaacatt tccatcgttt cctataacga tatgcaagta
       61 aaacatgagt cattttttaa aatagctatt tctaatatgg gtggagacgt taatacttta
      121 aacattttca ctttaggatt aggtccgtgg ttaacatcaa tgattatctt gatgctgatt
      181 tcttatcgga atatggataa atacatgaaa caaacaagtc ttgagaagca ttataaagag
      241 cgcatcttaa cattaatttt aagtgttatt caaagttatt ttgtgattca tgaatatgtt
      301 tcgaaagaac gtgttcatca agacaatatt tacttaacaa tattgatttt ggttactgga
      361 acgatgttat tagtttggtt agctgacaaa aatagtcgct acggcatcgc aggaccaatg
      421 ccgattgtaa tggttagtat tattaaatca atgatgcatc aaaaaatgga atatatagat
      481 gcaagtcata ttgtgattgc gttgttaatc atccttgtga taatcacatt gtttatctta
      541 ttatttattg aattagtaga agtgagaata ccatatatcg atttaatgaa cgtttccgca
      601 acaaatatga aatcttattt atcttggaaa gttaaccctg caggcagtat tactttaatg
      661 atgagtattt cagcttttgt tttcttaaaa agtggcattc attttatttt atctatgttt
      721 aataaaagca tatcagatga catgccaatg ctgacatttg atagtccagt aggtatttca
      781 gtatatttag tgattcaaat gttattgggt tattttttat cgagattttt aatcaatact
      841 aaacaaaaat ccaaagattt cttaaagagt ggcaattatt tttcaggagt taaacctggt
      901 aaggatacag aacgttattt aaattatcaa gcacgacgcg tatgttggtt tggattggca
      961 ttagttacag tcattattgg tataccgctt tatttcacat tgtttgtacc gcatttatct
     1021 actgaaattt atttctcagt acaactgatt gtattagttt acatcagtat taatattgca
     1081 gaaacaattc gtacatattt atattttgat aaatataagc catttttaaa ccagtattgg
     1141 taaggaggta attatgaaat actttattcc agcttggtac gatgaccaac gatggtggca
     1201 agacacgact gtgccgtatt atcaactaca aaataagacg gaatttgacg atatgattag
     1261 tttaatggga atgcaccttg aaaatgactt agattatcaa ctgattgttc tcaatcatgc
     1321 accaaattta agaacatttt tacatcgata tgacttatat gagacaaagt attcgtctgt
     1381 gtttgatgaa attcaaggat tcagtcacca tgcgccacaa gcgattaatt atcatcactt
     1441 aaaatggccg gatgatgttg agtttgtgta cacaccgtat ttattaaaat gtgtgacgag
     1501 tgaacagacc tatacaaata tttattttag tcaagaaggg tattcaattt ggtttgaaga
     1561 atttgaaaga gatcagttac aacggcgtta tatttttgat gacagaggtt atttatcagc
     1621 gatacgttat tttgatgatc agggagaggc ttcttaccaa gaatatttaa cgattaatgg
     1681 agattgtgta cttcatgaag atttgaaaaa tggcagagtc actgtttcaa aaagatatca
     1741 acatcactat caacaaacag aatataacaa tatggctcaa ctaattgaag aaaaatttca
     1801 agcaatgatt gcacaacaaa tacatgaaga tgatcatgtg attgtggctt cagatgctag
     1861 gcacaatcga caaatagcca atcatattcc agcgaaatca ttaagttatt cattttttaa
     1921 aaatagaaat gaaactgtgt cagatgagga atatcaatct atcgtaaaga atgcccattt
     1981 aattgttgat agtgtgcaac tagaacgtga tttaattagt catcaagaga agtatcagcg
     2041 ggagaataca atgattcgaa tcacaccatt tgaaacgaga caatcaccta atataagtag
     2101 tcaattgatg gaaacattta taggtgtatg gatagatggt atgagtgacg ctgatttgca
     2161 acaaatgatg caacgacttg tggattatat cgcacaggaa gattattacc gtttaatttt
     2221 attatcgcgc catcaaaatg acataccgat gtggcttcgt gaatgtatta cgtcggtaaa
     2281 tgaggaatac caagctaaac agaatgcgga tgttaatgtt tcagcattaa tgacacctga
     2341 agatcaagat gacatcattg ctgttaagac gatacatgct gaacatgatg ttgtagaagc
     2401 attgcggacg ttgcgacttg tgatagatat gtcaaaagaa cctgacttgt atttacaaat
     2461 tagtgcaatt agcgctggga ttccacaaat taatggtcaa caaacagatt acgtctctga
     2521 ttatgacaat ggccgtatta taaatacagt tgatgaatta gatgatgcgt taaattatta
     2581 tttattttat ttgaaaaatt ggaattatgc gtacgcctat tctttaaaat taatagatgc
     2641 atatgcttct aagaatatta ttaatcagct cgatgagtta atagaaggtg aaaatgatgc
     2701 cacgtaaatt tagagttttg caaattggag gagacgattt agaacctatt tttcaacaca
     2761 aaaaaggtgt gagttgggat tacttcgata ttggattgtt tgaatttgat agtggttatg
     2821 tagaggctat tgaagcgatt gttgaagcag aagggcgctt tgattttatc tatattcaag
     2881 caccatactc ggagacatta acgaatttat tacaaatgat aagcgaacca tacaatacgt
     2941 atgttgatga atcattttgg tcagttgaat atgaacaaga cgaaaatgtc caaaaatacg
     3001 ttgttcaacc attacattac cggaatattg aagaacgtaa taataaatta gaggcagtta
     3061 gcttctcagg acagtatgga gataaggttt ctcctaagtt agcacttgtg catccgaatt
     3121 ttaaaggaga tgtcgtttac caaggtaatt cagagctcac attgagtgga gaatttggga
     3181 aagaatttaa acctatcgca tcttggcaaa ataatctcgt ttacgataaa gataaagtca
     3241 ttcaaatatg gccagaattt gatattgatg gtgcggtcga gttgcaatat acatttagat
     3301 tgattcagac tggcgctgat ggtgcattaa ttgaacaaat cgtattgact gatgatatgt
     3361 tagacagtcc tttagagata cctgcgaaac catttgatgc ttatataagt gtaactgtta
     3421 aggcgcgtgg gaacgggacg gtacatttag gacctataca caaacgatgg tctagattag
     3481 acatgggtca atttttactt ggtggtagtc gtttcgtaga tagtcaacga caggaattta
     3541 tttattattt ccaccctggt gatatgaaac cgccactaaa cgtatatttt agtggttatc
     3601 gaacagcgga aggtttcgaa ggatattata tgatgaaacg tatgaatgca ccgtttttac
     3661 ttatcggcga tcctcgtgtt gaaggtggta gtttttatat cggttcatct gaatatgaac
     3721 aaggtattat caatgttatt gacgagacat tagaaaagct gaattttaaa tcacatgaat
     3781 taatattatc tggtttatct atgggttcat ttggtgcctt gtattatggt gctcagttaa
     3841 atcctcaggc aattattgtt ggtaaaccac ttgttaatat tggaacgatt gctgaacata
     3901 tgcgattact tagaccagaa gagttcggta cagcattaga cgtcctggtg tctaatgaag
     3961 gtgatacatc tcaagcgtcg atacaggcat taaatcaaaa attttggcaa acatttcaaa
     4021 agaaatcatt gtcacaaact gtttttgcca tagcatatat gcaacatgat gattatgatc
     4081 cacatgcatt tcaagagcta ttacctgtat tgacagcaca ccaagcaaga gtgatgaatc
     4141 gcagtattcc tgggcgacat aatgatgatt cacctaccat tgcaagttgg tttgttaatt
     4201 tttacaacat tattttggaa gacaagtttg ggagagttca acatgctgaa aaacaaaaca
     4261 tttaaagtta cttggaatta tatttcacaa actacattta tgtatggctc taaagtatca
     4321 ttttcaaatg gtgaagtgac ttttataaat cctttgatgc cctctggatt accgattcat
     4381 gagtggttga tgttaaagca attttcaaaa tataaaagtg cgccaagttt accaattttg
     4441 cgtagaggac agcattataa attgcatttt gattttgatg caacgcctgc tggttcagtg
     4501 tattttatca tcatttttta taataaaaat ggcacaaaac taagtactga gattgtaaag
     4561 tcaaatagta ttacgattca atatcctgat gaagcctatg cttataaaat aaaaatgatg
     4621 aatgcagcat cgacgagtct tatatttaga tgtttaacaa tcacagagat gacgcatcaa
     4681 tatgatttag agtataaaag catgcgggtg acgaagatag gtgatgacca atatggaaat
     4741 gatatgatca atgtcattat tgcagaacca tctgacacct atccaactat ttcgaatgat
     4801 tttttgaaac tgtttggtca tgtttggctc gttgaacgtt ggatggacga caatatcgag
     4861 ggaaatatta agcaactaaa gaatgatttg caaagtcaag ataccctaaa ggctattaat
     4921 ttgattagtt atgggtcaaa gtcaaatgtt tttgcaactt atgtcgctca gcatttgggt
     4981 tgcaaagtgt atcgtacaag ccatgaagat gatgatttaa aaggatggct tacagaacat
     5041 gtcccaggaa atcatgaact aaaagataca aatgtcgagg tttattttaa agaagagcaa
     5101 gacaaacatc taaattatat gtcacgttta atgaatccag tacgattttt agattactta
     5161 gatgtatcga aactgaatgg tggggaagta aatgaaacat aaactagatg ttacgataaa
     5221 cgaattaaga ctaaagtcga ttagaaaaat agtgaaacgc atcaatacat ggagcgatga
     5281 agttaaatca tattctgatg atgcgttaaa acaaaagaca atagaattta aagaacgttt
     5341 agcatcagga gttgatacac tagatacatt gttacctgaa gcttatgcag tggcacgtga
     5401 agcgagctgg agagtattag gtatgtatcc taaagaagtt cagttaatcg gagcgattgt
     5461 attgcatgaa ggtaacattg cggagatgca aacaggcgaa ggtaaaacat taacggcaac
     5521 gatgccttta tatttaaatg ctctttcggg aaaaggaaca tatttaatta caacgaatga
     5581 ttatttagcg aagcgagatt ttgaagagat gcaaccatta tatgaatggt taggtttaac
     5641 tgcttcatta ggttttgttg atattgtgga ttatgagtat caaaaagggg aaaaacgtaa
     5701 tatatatgaa catgatatta tatatacaac taatggacgt ctcggttttg attatttaat
     5761 tgataatttg gctgatagtg cggaagggaa atttttacca caattaaatt acggtattat
     5821 tgatgaagtg gattcaatca ttttagatgc tgctcaaaca ccattagtta tttcgggtgc
     5881 accaagatta caatcaaatc tatttcatat tgtgaaagag tttgtagata cattgattga
     5941 agacgtgcat tttaaaatga agaagaccaa aaaagaaata tggctgttaa atcaaggtat
     6001 tgaagcggca caatcatact ttaatgttga agatttatat agcgaacaag cgatggtcct
     6061 agtgcgtaat attaatttag cactgcgcgc acaatatttg tttgaatcta atgtcgatta
     6121 ctttgtatat aatggtgata ttgttttaat tgaccgtatt acaggtcgta tgttaccggg
     6181 aactaagttg caagctggac ttcaccaagc tattgaagcg aaagaaggta tggaggtttc
     6241 aacagataaa agtgttatgg caacaattac cttccagaat ttatttaaac tttttgaatc
     6301 attttcaggt atgacagcta caggaaaatt aggcgaatca gagttctttg atttgtattc
     6361 aaaaatagtc gtacaagtac caactgataa agcgattcaa cgtatcgatg aaccagataa
     6421 agtgtttcgt tcagttgatg agaaaaacat cgcgatgatt catgatatag ttgaacttca
     6481 tgaaacgggg cgaccggttt tactcataac gagaactgct gaagcggctg aatacttttc
     6541 gaaagtatta ttccaaatgg atattcctaa taatttactc attgcgcaaa atgttgcaaa
     6601 agaagcgcag atgatagctg aagcagggca aattggttcc atgactgttg cgactagtat
     6661 ggcaggtcga ggcacagata ttaaacttgg tgaaggtgtc gaagcattag gtggattagc
     6721 tgttattatt catgaacata tggaaaatag ccgtgtagac aggcaattac gtggtcgttc
     6781 tggtagacaa ggggatccgg gatcatcttg tatatatatt tcactagatg attatttagt
     6841 taagcgatgg agcgatagta atttagcgga aaataatcaa ttatattcat tagatgcaca
     6901 acgattatcg caaagtaatt tgtttaatcg caaagttaag caaattgtag ttaaagcgca
     6961 gcgtatctcg gaagaacaag gggttaaagc tcgtgaaatg gctaatgaat ttgaaaaaag
     7021 cattagtata cagcgagatc ttgtatacga ggaacgcaat cgagttttag aaatagatga
     7081 tgctgagaat caagatttta aagcgttagc taaagatgta tttgaaatgt ttgtaaatga
     7141 ggaaaaggtg ctaacaaaat cgcgtgttgt cgagtatatt tatcaaaatt taagtttcca
     7201 atttaataaa gatgtggctt gtgttaattt taaagataag caagcagtag tgacattttt
     7261 attagagcaa tttgaaaagc aattagcttt gaatcgtaaa aacatgcaaa gtgcatatta
     7321 ttataatatt ttcgttcaaa aagtcttttt gaaagcaatt gattcatgtt ggttagaaca
     7381 agtcgactat ttacaacaat taaaagcaag cgttaatcaa cgacaaaatg ggcaacgtaa
     7441 cgctattttt gaataccata gagttgcctt agattcattt gaagttatga cacgaaatat
     7501 caaaaaaaga atggtgaaaa atatttgtca aagcatgatt acatttgata aagagggtat
     7561 gccagttata cattttccat aaatgaaaag gggtagcgca tgacaatata taatataaac
     7621 tttggtatag gctgggcgag tagcggtgtt gaatatgcac aagcttaccg tgctaaatta
     7681 ttgagacgta caaatcaaga cactaaattt gtgtttttag attttataca gtcagagaac
     7741 atacagacat taacgcaaaa cattgggttt aaagatcaag aagttatttg gttgtatcag
     7801 tattttagtg atatttcttt agcaccaaca acgtacacgt tagatgacat tgaacgtgag
     7861 cttggtcatg acattagttt tagagaaaga aatggtaaga tagtccgcct atattttaat
     7921 gggaaatcat catttgtaac atgttatctg caaaatgaac aaaaagatat tgtggatcgt
     7981 gcagaatttg taattaatag tatgttagta cgtaaagatt tttatagtta tacgcgcata
     8041 ttttctgagt attatgcacc agctgataat aaagcgaaat tatatatgcg acaattttat
     8101 aatcaagatg gttccatcgc ttataacgaa tatattgatg gagacagctc tatatatgtg
     8161 tttgaagatg cggtgttgta taacaaaacg gaatttattg catacttttt acaacgattg
     8221 aatttaaccc gagacgatat tgtcatatta gaccgcgctt ctgatattgg tcaggctgtt
     8281 ttgcagcata aaggtgatag taaagttggt gttgtgattc atgctgatca ttatagtaat
     8341 aatatgatga gtgagcagca tatactatgg aacaattatt atgaatatca attttcaaaa
     8401 gctaaataca ttgatttctt tattacagca acagatattc aaaatcatat ggtttgtcga
     8461 caatttgagc aatatcaagg ttatcgccca cgtgtttata ctattcctgt gggaagcatt
     8521 gatgcattat catatccaac attatcaaga aagccatatg cgatgattag tgcatctcgt
     8581 ttagcgaatg agaaacatat tgattggctt gtcaaagcgg ttatcgtggc taaacgacaa
     8641 gtgccagaat taacatttga tatttatgga gaaggtagcg agaagacgcg actgcgtaaa
     8701 attattgata cacaccgcgc acaagattat attcgtttac tagggcatgt taaacttgat
     8761 gaaatttata atgattatga gttatttctt tctgcatcaa ctagcgaagg ttttgggtta
     8821 acactaatgg aagcggtagg ctcaggacta ggtatgattg gattaaatgt gaattatggt
     8881 aacccaacct ttattcgaga tggggaaaat ggctacttgg taccttttga taccgacgaa
     8941 gatagtgtgg atgatgttat cgcaaaacta gctcatgcca ttgtaatgta ttttaacaat
     9001 ggtccccaga caccacatga catctcttat gaagtggcac agcaatttat gactcaagat
     9061 attattttaa aatgggaaac attagttcaa gaggtgctac atgattaaat tatttgatta
     9121 ctttaacgat cattcacgaa agttatatga gtcttttaaa gccagtaagt tggaagaaga
     9181 tttaacaatt gtactcaatg acaatggctt tttaccggac gatgttatat caccgtatca
     9241 attttttgca gataatcata atacagaaaa tatgaaacca cgatttttta atcaggttac
     9301 tgtaccagct ttttgggaaa ttaaaggtaa caacaattcg gctacaatta atgatatggg
     9361 acgtctacga ggtaaaatat tttatcaaag tggagagcgc cctagaattg ttagtcgtgt
     9421 cgaatggttt gatgaccaac aacgtgtccg atttgtcgat tattattcta agaatggtat
     9481 taaatttgca caaactgttt acgatttaaa tcgtaaagcg atcttgaaga aatatatgac
     9541 agcagaaggt aaagaagtga tttatgaaaa ttttgtaaca tctgatgtca tattggattg
     9601 gcaagggaag tcttactttt tcccttcaaa gctcgcattc gcattatttt ttatcaagca
     9661 acttgaaatt acggaacatc atttcgttat taactcacta gccctaccat tttcagtgtt
     9721 atataatttg ccatcaaaag gtagtgatgt tttggtatgg caagaacact gtaatggtaa
     9781 tgtcccggga aatatgcaat tgatgtgtaa aggtgatatg aaacgacatt gtaatattat
     9841 tattccagat aaaaacgaat atgaaacgat gctcaatata gcagacgcaa aggttcaatc
     9901 tcgtatttta caaggcggat atctatataa ctatcgtagt cgtaatagat atactaaaga
     9961 aattgtaata ttaactaact cggatcaact tcgtaacatc aaggtattgg ttgaaacttt
    10021 accagatttt aagtttcaca tcgctgctat tacagagatg tctgataagc taatgcaact
    10081 tgatcaatat gctaatgtgc atttataccc atctattaat attgacaggg taaatgaact
    10141 ataccagtta tgtgatattt atcttgatat caatgagggt aatgaaattt taaatgcggt
    10201 ggaacaagcg tttgactatg agttgttgat tttaggttat cgtcaaaccg cacaccatgc
    10261 taaagtaaca ttatcagagc acttatttga gcataatgat gagataacaa tggaaagtaa
    10321 agaccaatta atacaaatgt tagaaagttt gaaagatcaa caacagtttc gagatgcttt
    10381 attagcacaa aaagcacatg cacacgaaat ctcgcgtgaa caattcgagc aagtttttaa
    10441 acaggcgctc gaaagctaaa aggaaaaagc agtctaaaat aaaacatcat ttaatataaa
    10501 agatttgacg taatatgatg ttagcgacat ggacaatatg atattacgtc atgcttgttt
    10561 tgtttactta aatataagct aagtaataag tagataatta ctaacaacaa taactagata
    10621 gataagtgta aatttcttgt aaacaggtat ataatagtat gtaattcttt gaaggaagta
    10681 agtgaggaag gagtatgttg atggctaaat atcgagggaa accgtttcaa ttatatgtaa
    10741 agttatcgtg ttcgacaatg atggcgacaa gtatcatttt aacgaatatc ttgccgtacg
    10801 atgcccaagc tgcatctgaa aaggatactg aaattacaaa agagatatta tctaagcaag
    10861 atttattaga caaagttgac aaggcaattc gtcaaattga gcaattaaaa cagttatcgg
    10921 cttcatctaa agaacattat aaagcacaac taaatgaagc gaaaacagca tcgcaaatag
    10981 atgaaatcat aaaacgagct aatgagttgg atagcaaaga caataaaagt tctcacactg
    11041 aaatgaacgg tcaaagtgat atagacagta aattagatca attgcttaaa gatttaaatg
    11101 aggtttcttc aaatgttgat aggggtcaac aaagtggcga ggacgatctt aatgcaatga
    11161 aaaatgatat gtcacaaacg gctacaacaa aacatggaga aaaagatgat aaaaatgatg
    11221 aagcaatggt aaataaggcg ttagaagacc tagaccattt gaatcagcaa atacacaaat
    11281 cgaaagatgc atcgaaagat acatcggaag atccagcagt gtctacaaca gataataatc
    11341 atgaagtagc taaaacgcca aataatgatg gttctggaca tgttgtgtta aataaattcc
    11401 tttcaaatga agagaatcaa agccatagta atcgactcac tgataaatta caaggaagcg
    11461 ataaaattaa tcatgctatg attgaaaaat tagctaaaag taatgcctca acgcaacatt
    11521 acacatatca taaactgaat acgttacaat ctttagatca acgtattgca aatacgcaac
    11581 ttcctaaaaa tcaaaaatca gacttaatga gcgaagtaaa taagacgaaa gagcgtataa
    11641 aaagtcaacg aaatattatt ttggaagaac ttgcacgtac tgatgataaa aagtatgcta
    11701 cacaaagcat tttagaaagt atatttaata aagacgaggc agttaaaatt ctaaaagata
    11761 tacgtgttga tggtaaaaca gatcaacaaa ttgcagatca aattactcgt catattgatc
    11821 aattatctct gacaacgagt gatgatttat taacgtcatt gattgatcaa tcacaagata
    11881 agtcgctatt gatttctcaa attttacaaa cgaaattagg aaaagctgaa gcagataaat
    11941 tggctaaaga ttggacgaat aaaggattat caaatcgcca aatcgttgac caattgaaga
    12001 aacattttgc atcaactggc gacacgtctt cagatgatat attaaaagca attttgaata
    12061 atgccaaaga taaaaaacaa gcaattgaaa cgattttagc aacacgtata gaaagacaaa
    12121 aggcaaaatt actggcagat ttaattacta aaatagaaac agatcaaaat aaaattttta
    12181 atttagttaa atcggcattg aatggtaaag cggatgattt attgaattta caaaagagac
    12241 tcaatcaaac gaaaaaagat atagattata ttttatcacc aatagtaaat cgtccaagtt
    12301 tactagatcg attgaataaa aatgggaaaa cgacagattt aaataagtta gcaaatttaa
    12361 tgaatcaagg atcagattta ttagacagta ttccagatat acccacacca aagccagaaa
    12421 agacgttaac acttggtaaa ggtaatggat tgttaagtgg attattaaat gctgatggta
    12481 atgtatcttt gcctaaagcg ggggaaacga taaaagaaca ttggttgccg atatctgtaa
    12541 ttgttggtgc aatgggtgta ctaatgattt ggttatcacg acgcaataag ttgaaaaata
    12601 aagcataatt atattggggg aagagcatct atatattttt ttaagtatat aagacgtctt
    12661 atttcccttt aatttattgt gaagtatatg caaaatgcaa tgaatagatt gtccatcatt
    12721 ttaacgttat aatgaattta acgacttaga actacacaag taaaggagaa tgaagatgtc
    12781 tcgaaaaacg gcgctattag ttttggatat gcaagaaggt atagcgagta gtgtacctag
    12841 aataaaaaat attattaaag cgaatcagag agcaattgaa gcagcaagac aacatcgaat
    12901 accagtcatt ttcatacgtt tagtgttaga taagcatttt aatgatgtct cctcgagtaa
    12961 taaagtgttt tcaacaatta aagctcaagg atatgcgatt actgaagcag atgcatctac
    13021 acgaatactt gaagatttag caccactaga agatgagccg attatttcta agcgacgctt
    13081 tagcgcattt acaggtagtt acttggaagt ttatttacgt gcaaatgata ttaatcattt
    13141 agtattaacg ggtgtctcta caagtggagc tgtattgagc acggcattag aaagtgtaga
    13201 taaagactat tatattactg ttttagaaga tgctgttggt gatagatcag atgataaaca
    13261 tgactttatt attgaacaaa ttttatcacg ctcatgtgac attgaatccg tagagtcatg
    13321 gaaaagtagt ttatagttaa tataacgtca attaaagctc ggcagtaatg tttgagaata
    13381 agtacatttg ctcatattta taaaatgtgt gagatggcaa ttgaaacgga tatgatgagg
    13441 aacatttgaa cataaaataa tatatttata taaaacgacc cgaggcgttc gaactgaatg
    13501 cctcgggttt aattgaataa gaaatcggac ttatgaacag aaatatgttt aagtccgaac
    13561 tccttgttta tacttataaa ttttacgggt ttaatataat acttatttac ctgtaatata
    13621 tgataattct tcagcggcag ctgcgttgat agttctatga gaaatgatac ctaatccttt
    13681 aacattggat tctgaaataa cgatagaacc atcactgtta actttttcaa caaatgctac
    13741 atgaccgtaa tgttgatctg caccaaattg tccagcctca aatacaacag cagcatgacg
    13801 ttttggtgta tgacttactt gataatcacg gtattgagct cgattattcc aattatgtgc
    13861 atcacctaaa tcacctgaga tagatgtacc aaattgtttc atacggttat atacgtacca
    13921 agtacattgg ccatgtggat atggcatact atcagatacc tcacggaaag gtttgaattc
    13981 atctgatgaa tcatcataat ccttgataga acgttcatat ttatctaaat ctggcatgcg
    14041 ttcatcgtca aactgagtta attgatagtg tttaataata ctgtttaatt tcttagcata
    14101 gtttggatct gtagcatatg ttttagataa gtgtgatgtt gcatctttat aagaatcggc
    14161 ttccgatttc catgttggtt tataaattgt tcgattgcca tcaataccat ttttaataag
    14221 gtcagagtaa tcttttagtg attctttcgt gcttggatat tttcggaatc cagcattaat
    14281 actatacaat tgattaccat cagcttctaa tgtgttaaaa ggaacagaat tcccttcaaa
    14341 agcacctttg ataccgaata aattatggtt tggtgactta gctaaagcac tacgacctga
    14401 gtcagattct aagattgctt gggcaatcat gacagacgca taaatatcgt tatcttgacc
    14461 aatgcgatgt gcatctttag caattgattt gacaaattga cgtgtatctt ttgagtcaac
    14521 aacgttaaat tgtccgctat catcattgtt agatatacta ggatctgttt cgaataatga
    14581 tgttgcacgt gtatcctttt gattaacatc gttattgaat gattgagcag gtttagattt
    14641 atgtttcaat tcatcttgtg ttggtaactg tggattcttt gtattagatt tttcattttt
    14701 gtctttttta gattgagatg cataatcttt ttgtgttttc tttgcatctt cactgtattg
    14761 atccaaaata gagtctaaag ccgaatctga cattgattga ttatctttcg atgaagattt
    14821 ttgatttgct ttatcgtcac ttgctggttg actatttgat tgattaggtt gtgttggctt
    14881 tggcgaattt ggttgcttat tagatgtact tggttttgta ttgtttgatt taggtgcttt
    14941 ttgattgtct gctttatctt gtttagatga ttgcgtatca gtgtcatttt tgatgctatt
    15001 gtcactgttt ttattcgaat catttgttga cttttcgcca ttacgaggtt gttcgtaatc
    15061 agaaatatcc gaatttaaat tgaataagtt ttggattaaa gttgttaatg agtaattatc
    15121 atcgtattta tttttggtta gcaattggtt tatattggtt tgtggtaaat tcttataaat
    15181 aaaatcaatg atattgttag agtctgaagt gctgtcgtct atagttttaa attttttgtc
    15241 gttattgtct tggttacttg tattattttt gtctgcttta tcaatatctt tacttgtagt
    15301 atccttagaa gtttcatcgt cattagattt ttttgaatca tgagatgttg tcttagctgt
    15361 agtatctttt tgaggtgtat cagcataagc ggtaggtgaa actaaagtag gtaatacgag
    15421 cgtagttgat agcaaataaa ttaaaatttt atttttaggc atatttcgta ttctcccttg
    15481 aaaaatataa taattaagtg tgataataaa ctatgatttg ttataattta tcgtatgctg
    15541 aaaatagttg ataggtatca atcgactaaa tatcttccag taaattgatt atactaattc
    15601 acaacgcaaa aataaattaa tttacaaaaa atatataaaa aatatgaata attcctacat
    15661 aggagtgtga caatgaagaa cgcatttaaa ttatttaaaa tggatctgaa gaaagtagct
    15721 aagacgccag ctgtgtggat tatcttagca ggcttagcta ttttgccatc gttctacgct
    15781 tggtttaact tatgggcaat gtgggatcca tatggcaaca cgggacacat caaggtcgca
    15841 gtcgttaatg aagataaagg cgacacaatc agagggaaaa aagttaatgt cggtaatacg
    15901 atggttaata cactcaagaa aaataaaagt tttgattggc agtttgtaag tagagagaaa
    15961 gctgatcatg agataaaaat gggtaaatat tttgcaggta tttacatccc atctaagttt
    16021 acacatgaaa ttacagggac actacgtaag cagcctcaaa aagcagatgt agaatttaag
    16081 gtgaatcaga agattaacgc tgttgcgtct aagctaacag atactggttc gtcagttgtc
    16141 gttgaaaaag cgaatgaaca atttaataaa acagtaactc gagcattatt agaagaagct
    16201 aacaaagcag gtttaactat tgaagaaaat gtgccgacaa ttaacaagat aaaaaatgcg
    16261 gtatattcag cagataaagc tttacctaag attaatgact ttgcgaataa aattgtatat
    16321 ttgaataacc accaagcgga tttagataaa tatgccaatg attttagaaa actaggaaat
    16381 tataaaggtg atattttaga tgctcagaaa aaattaaacg aagtcaatgg tgctattccg
    16441 caacttaatg aaaaggctaa gttgatatta gctttaaata attatatgcc gaaaattgaa
    16501 aaagcgttaa attttgcagc tgatgacgtg ccagcgcagt tccctaaaat taatcaagga
    16561 cttaacattg cgagtcaagg tattgatcaa gctaatggac agttaaatga tgccaaaggc
    16621 ttcgtcacac aagttagaag tagagtcggt gattatcaag atgcaattcg acgcgcgcaa
    16681 gatttaaatc gaagaaacca gcaacagatt cctcaaaata gcgcggcgaa caacgaaaca
    16741 tcaaatagtg cacctgcagc tggtaatggt gtagcatcaa cgccaccaag tgcaccaagt
    16801 ggcgatactg caccaaataa taatgttacg caaaataccg caccaaatag taataatgcg
    16861 cctgtatcga ctacaccaca aagtacaagc gggaaaaaag atggtcaaag ttttgtagat
    16921 ataacaacaa cacaagtcag cacagctaac gagaacacac aaaacattac agataaagat
    16981 gttaaatcaa tggaagcggc attaacgggc tctttattat cattatcaaa taatttagat
    17041 acccaagcga aagccgcaca aaaagatagt caggcattac gtaatatttc gtatgggatt
    17101 ttagcatcgg acaagccttc tgattttaga gagtctttag ataatgttaa gtccggttta
    17161 gaatacacaa cgcaatataa tcaacaattt atcgatacat taaaagagat tgagaagaat
    17221 gaaaatgttg atttatcaaa agaaattgat aaggtaaaag cagctaataa tcgaattaat
    17281 gaatcattaa ggttagttaa tcaattaagc aatgcattaa agaatggtag ttcaggaact
    17341 gctgaagcta ctaaattact agatcaactt tcaaaactag attcatcatt atcatcattt
    17401 agagattatg ttaaaaaaga tcttaacagc tctttagtat caatatcaca acgtattatg
    17461 gatgaattga acaaagggca aactgcatta tccaatgttc agtctaaatt aaatacaatt
    17521 gatcaagtca ttaacagtgg acaagctatt ttaaaaaatg gtaaaacacg tattgatcgc
    17581 ttacaaacag tattaccaag tattgaacaa caatacatta gtgctgttaa aaatgctcaa
    17641 gcaaacttct cgaaagtgaa aagtgatgta gctaaagctg ctaactttgt gcgcaatgac
    17701 ttaccacagt tagaacagcg attaactaat gcgacagcaa gtgtgaataa aaatttacca
    17761 acgttattaa atggttatga tcaagcggta ggattactaa ataaaaatca gccacaagcg
    17821 aaaaaggctt tatcagattt agctgatttt tctcaaaata aattgcctga tgttgaaaaa
    17881 gatttgaaaa aagcgaataa aattttcaag aaattagaca aagatgatgc agtcgacaaa
    17941 ttaatcgaca cacttaagaa tgatttgaaa aagcaagcgg gtattattgc aaatcctatt
    18001 aataagaaga ctgttgatgt tttcccagtt aaggattatg gttcaggtat gacaccattc
    18061 tatactgcac tgtcagtatg ggtaggtgca ctcttgatgg taagtttatt aacggttgat
    18121 aataaacata agagtctaga gtcagtctta acgacaagac aagtgttctt aggtaaggca
    18181 ggattcttta taatgcttgg tatgttgcaa gcactcattg tatcggttgg agatttgtta
    18241 atcctaaaag caggagttga gtcacctgta ttatttgtac ttataacgat tttctgttcg
    18301 attattttca actcaatcgt atatacgtgc gtatcattac ttggtaaccc aggtaaagcc
    18361 attgcaatcg tattgcttgt attacaaatt gcaggtggtg ggggaacatt cccaattcaa
    18421 actacgccac aatttttcca aaacatttcg ccatacttac catttacgta tgcaattgat
    18481 tcattacgtg aaacagtagg cggtattgtt ccggaaatcc taattacaaa attaattata
    18541 ttaacgttat ttggtatagg attcttcgtt gtaggtttaa ttttaaaacc tgtaacagat
    18601 ccattgatga agcgcgtatc tgaaaaagtt gaccaaagta acgttacaga ataaaaatta
    18661 aatccacaca ttagggttat agctccttaa tgtgtggatt tttatgtttt tagacagaag
    18721 agatagtaat ttctgtcttt tatgggacgg ttgttatcat tgctattatc caggatgact
    18781 tactatagca ctaatattac cgacaaagtg aatatcctcg tcttccgtag ttaaaataaa
    18841 gctagaacct ttttggatgt catagtgctt atcgtttact gttaaagtac cagtaccatc
    18901 gataattgta actaagcaat aagcatgtgg tttattgaat tttaaatctc catgaatatc
    18961 ccatttatat actgcaaaat attgattatc tacaaattga gttacagtgt gtgtgtcgat
    19021 gtgagttgtt ataggagtag tatttggttc atgattgcct aattcaatca catctttact
    19081 ttgctctaag tgcaaatcac gcaattgacc attttgatct cgtctatcat agtcataaat
    19141 acggtatgtc gtatcggagg attgttgtgt ctctaaaatt aaaatacccg aaccaatggc
    19201 atggacagtg ccagcaggaa cataataaaa gtcaccgggc ttaacaggta tacgtttgaa
    19261 aagactgtca aattcatgat tatcaatcat gtctattaac gtctgtttat tatgtgcatg
    19321 tacgccatat ataatttcag cacctggggc tgcatctaaa atataccaac attctgtttt
    19381 acctagttcg ccttcgtgtt ttaaagcgta gtcatcatct gggtgaactt gaacagataa
    19441 tttatcattg gcatctaata ctttagttag cagagggaaa ctatctcgtg aatcattatc
    19501 gaataattca cgatgttgtg accaaagttg atctagggtc atatccttgt atggaccatt
    19561 gataattgta ttaggaccat ttggatgtgc agaaattgcc cagcattcac cagttgtttc
    19621 attagggata tcatagttaa atgcttttaa tgcatgaccg ccccaaattc tgtctttaaa
    19681 aacgggttgt aaaaataatg ccatagttaa aactcctcta tattttcatt aataagttat
    19741 aaatttctgt agtactgttt gcattaatta gtgattggcg tgtctcatca ttcattaacg
    19801 ctttagataa gcgctgaagt atttttaaat gtgtatcctg actgttgttt ggtacggcaa
    19861 ttaagaatat caattgaggt agactaccat ctagactgtc ccatttaaca ccatgattat
    19921 ttttcataac agctacaatc ggttgtttta caacatcaga ctttgcatgt ggaatggcca
    19981 cgttcatgcc aatagctgtc gtagactcca tttcacgttc tagtattgca ttttttaaat
    20041 gcgatgtgtg ctctacataa cggcaaattt taagtttatg aatcaacata tcaattgctt
    20101 cgtttcgaga catgtcgtga tcagtaatta tcatagtttg ttgatcaaaa acatgagaag
    20161 gtttattgag atgtgaatgt ttcgcggtgt tatctacatt gtcaacctct gtatcatgtt
    20221 gtgtaatatc tgtatcatga agttgcgtgt gttgcgctgg tgcatctact gctataactg
    20281 gtgtattgcg ttttaataat agtacagtag tcattgtgac aagactacct actatcactg
    20341 caaagataaa ccataataca tgatcaatac cacctaatac agccacgatt ggacctccat
    20401 gtgcgactct atcgccgaca ccaccaatgg ctgcaatgac tgatgcaatc attgcaccaa
    20461 tgatgtttgc aggtataatg cgcaatggat cttgggctgc gaaaggaata gcaccttcag
    20521 taataccaaa tagtcccata gtgaaggaag ccttacccat ttctctttcg gaatgattga
    20581 atttatactt ttgaacaaac gttgctaaac ctaaaccgat tggtggtgta catacagcaa
    20641 ctgcgaccat acccataacg gcgtaattac cttcagcaat aagtgctgag ccaaataaaa
    20701 atgctacctt gtttactgga ccgcccatat cgaaggcaat catcgcacct ataatcatcg
    20761 caagtataat aatattagca ccttgcatac tttttaacca ggttgttaat gcctcaaaaa
    20821 tattagaaat tggtgcaccg attaaaaata taaatatcaa tcctacaacg accgatgaaa
    20881 taatgggaat aataatgata ggcataattg gtgccattgc ttttggaact ttaatatctt
    20941 taatccactt tgcgatataa cctgctaaga aaccagcaac aataccacct aaaaatcctg
    21001 cgcctgcatc actgccataa aaactaccgt cagcagcgat agcgccgcca atcataccag
    21061 gaacaagacc gggcttgtca gcgatactaa cagcgatata tccagctagt attggaacca
    21121 taaatttaaa ggctaaacta ccaatgtttt caatggattt ccaaaatgaa tcatctggga
    21181 tgactaatcc ttttgatgtc gtttcaccgc ctagagtcag cgcgatggcg ataaggagtc
    21241 caccaactac gataaaagga accataaacg atacaccgtt cattaaatgt tgatacacca
    21301 tttgaatacc acttttagac ttaccgcgat ctttcgaatg ataatttgtt tcagattgat
    21361 aaataggcgc atcttgatta atgatacgtt gaattagacc tctcggatta tgaatccctt
    21421 cgcgaacatt ttcattaatc aaccgtttac caacaaatcg ggacagatca acttgtttat
    21481 cagctgcaat tatgacaccg tcagcttctt cgatgtcttg cgtagttaaa acattttcag
    21541 caccaacacc gccctgtgtc tctactttaa tatccacacc catttctttt gctacctgct
    21601 caagcttttc ttgagccata tatgtatgtg caatgccatt tgggcatgag gtaatagcta
    21661 caattttcat aaaatcatct ccttttctat attgtaagcg tattctcgat actaaaaaaa
    21721 agaataatta ccgttactag tggcaattat tcttgtaagt attcaaataa ctgttgcttt
    21781 aaactatgat catctaaact acataaatgg ttcactgaat catcatccaa gttagcaatt
    21841 aattgcatca tttgttttgt aaaagctttg tctttatgcg aaatcgctaa gaaaaagaca
    21901 agtttgacat cgtgttgtcg ccaaggaaaa acatcttttg tgcgaaaaat aagcacatgt
    21961 gattgtaaaa ctttttcagg atctccatga ggaatcgcca taaaattacc tatgtatgta
    22021 gaagatgatt tctcacgctc taaagctgat tcgatatatc cttctacaat cgcatgatgt
    22081 gcttgtaata ttttttgagc ttcttcaaaa atttgcacag tatgccgtga tttttgttca
    22141 gtatttacga caaggaaatt gacagtgtcc atatgatgat gtgcttgaac cggattttgc
    22201 ttttgcttca caacgtgtct gattttgtga cgatcatctt cagaaaataa tggtgcaacc
    22261 ttgatagtcg tcaggtgctt aggaagtatg tttagcgttt gtttaggaat atcatgggtc
    22321 gttattaata aatctacatt gtcaaagtga tagtgtgtta tattttctag tttaatcgta
    22381 tttatcactg acaactcttc ggataagtta tttattttag tttctaaaaa attcgacaca
    22441 cctagaccat aataacaagc aatgactaca tttaattgtg ttttggtacg acgctcgatg
    22501 gcagcttgaa aatgaattgt taaaaatgca atttcatctt cgctcatctc tatatcagta
    22561 tcaattgcta atttatcaat cgcttcaaaa agtgtgttaa acacaaaggg atagagtttt
    22621 ttaatctcta taactaaagg attgtttaaa taaatgtttt gagtgatacg taaatatgct
    22681 ttactaaaat gattatataa attttgttgt aaaatcgaat cttcattgaa aggtacatga
    22741 atacgttgct gcatcaattc gattaagcga tcaatataac tttgtataaa tatacgttct
    22801 atgccaatat cgagtttatt aaaatgataa gcaataaaga atgaaaacat attgattact
    22861 ttttcgttca agtcataacc taatctttcg ttgatttgct taatgcaaga ttgagatatc
    22921 aattttgaat cgtggtttaa cgtgtctagc tcacttaaag attgcttacg tttaatgatt
    22981 aaaatgagat gaattaaaag ctgttgtatt tgaatatcag ttgtttcaat actatgttgt
    23041 tgaagtgtct cttgtataat atgcgaaatc atcctttggt gtgaatcagg taattcattt
    23101 aaaattaggt cttcaacatg tacatgccct gatgataatt gatttaaatg gatgatggca
    23161 ttagtgatat cattatctgt tccatcgacc acaatacctt gttttttctt gattgttaaa
    23221 gcgatattaa atttttgaca ccattgttga attcgaacga aatagtcgtt gagcacagtt
    23281 ttagataata gataatcttg ctctagttgt tgcaatgtct gcgatttatt gtgcattagc
    23341 agttgatacg ccatagataa taatagtttt tctttatatg attgaatatg cgtgtaacgt
    23401 tcagttatcg tttctaaggt atactgagat gtatttaatt gatatccttt agatttaata
    23461 cttacgatga tatcatccat aaaattgcta ttgataacat ggatatcatt gcgaactgtg
    23521 cggtttgaaa cattgacatg tttagcaatt tcattagaac taatgtgctt tgatggattt
    23581 ttaataaaaa actggagtag ttttaagtgt ctatcaagca tttaacatgt acctcctttc
    23641 taaatttttc gtgtaagcgt ttttaagggt gtattaatat tattaaacat gagagcttat
    23701 acatacgtca atgacattaa agcgaacttt tatatgattt taacagagtg cgaattatgc
    23761 aaataaagaa cagcagtaag atatttcaaa tagaaaaata tctcactgct gtttttctga
    23821 atttatgcat ctggtacttg tggacgtatc aggcaaatga ttaattttta ggtgattgtg
    23881 cttgaggtgt ttgtttagaa ggcgtattgg tattatttga tttattagca ggtggtgtgt
    23941 tctgttgttg attattttgg ttgtttgttg acgattgact gccaccaccg tgagtattat
    24001 ttttatttga atttgagtct tttggctgag ctggttgcgt attcgatggt actgttgaat
    24061 ggttgttagg aacatttgac ggtgaagatg gttgattgtc attagtaacg ttattgccat
    24121 tattttgatt tttatctgtt ttgtctgcac tatcatcttg ttgatcattt tcttcggttt
    24181 ctgtcttttt atgcgtagat ttattttctt gttcttggtt attacttgat gatgtagaat
    24241 gatttattgc agcataaatt gcgaacccaa gtgctccgat taatacgata attacgatgg
    24301 taataagaag ttttttcaaa tataacgcct ccatgttaat gaaaagtagt tgatacgtga
    24361 agctaaataa tttatttcaa tattgccata atcattttaa aaa
//
LOCUS       DALPQQ010000023        24143 bp    DNA     linear   BCT 22-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus strain K18-6-464
            SAMD00233528-rid16434743.denovo.023, whole genome shotgun sequence.
ACCESSION   DALPQQ010000023 DALPQQ010000000
VERSION     DALPQQ010000023.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMD00233528
            Sequence Read Archive: DRR236061
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 24143)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 24143)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001543423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001543423.1
            Genome Coverage       :: 77x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/22/2022 17:09:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,811
            CDSs (total)                      :: 2,743
            Genes (coding)                    :: 2,689
            CDSs (with protein)               :: 2,689
            Genes (RNA)                       :: 68
            rRNAs                             :: 2, 4, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 4, 2 (16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 54
            CDSs (without protein)            :: 54
            Pseudo Genes (ambiguous residues) :: 0 of 54
            Pseudo Genes (frameshifted)       :: 27 of 54
            Pseudo Genes (incomplete)         :: 27 of 54
            Pseudo Genes (internal stop)      :: 10 of 54
            Pseudo Genes (multiple problems)  :: 10 of 54
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..24143
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMD00233528-rid16434743.denovo.023"
                     /strain="K18-6-464"
                     /db_xref="taxon:1280"
                     /geo_loc_name="Japan: Niigata"
     gene            <1..113
                     /locus_tag="O7798_000847"
     CDS             <1..113
                     /locus_tag="O7798_000847"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001801842.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="tandem-type lipoprotein"
                     /protein_id="HDC2863116.1"
                     /translation="SVGYKKIEYKFSKDKGQETTLRDYLNFGPSEGENVE"
     gene            103..1431
                     /locus_tag="O7798_000848"
     CDS             103..1431
                     /locus_tag="O7798_000848"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498992.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDC2863117.1"
                     /translation="MLSRKYKIDLKAINQNTESTSAISKASYEVENANNNGLSKRDVI
                     NQFNDLKKMKKFPSNLEYVDSYTDSLTGVTTSAFLNKDTGKVTLGMTGTNLQDEAFKK
                     LKEGEFSRQNVTNALETVKDGYADLKILYSPASDQNYRYANTQEFINKIKSKYDIDFI
                     TGHSLGGRDAVVLGMSNGIPNIVVYNPAPISITSLNPNSPDGKRLLELYKNYKGNITR
                     FVAENDALTENLKKYKHYVFFGNDKVFKNGKGHEMEGFLTEEEQKAIKKELKKLQGYA
                     EENNKSFVKNSNNAISKLASIELLRANMMTTNGGGLSSSQQKVLESLTALTIAQSFSQ
                     LIDDEINQIKKMYNEKKKKFGKNWEDAQKAGKAVGEDLSVNGVLNALDEGQVNESSMV
                     REPEQMISAKERQLSTIGSSVSNYIMRVRLSINEIVDKDQVLASQIGGLL"
     gene            1428..1751
                     /locus_tag="O7798_000849"
     CDS             1428..1751
                     /locus_tag="O7798_000849"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498993.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDC2863118.1"
                     /translation="MMFNQINNKNELEESYESEKKRIENELQNLNELRHRTRKENERS
                     YDVFQYLKHEMNYSEDAQRKMTRNIEAYEQEINEIIRKQEWKLEEYKEDLKKSYEKQL
                     DKLSD"
     gene            1770..2084
                     /locus_tag="O7798_000850"
     CDS             1770..2084
                     /locus_tag="O7798_000850"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498994.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDC2863119.1"
                     /translation="MTLIEPDMTLRMPDISTTVETLNLISKMEAQKENIRTVIAPEHK
                     HKYKDIENGLKGEEKVLIEQMAQHCEAFKANFKGAAQGDWVKSAMSEIDSIKDDLKKI
                     NS"
     gene            complement(2374..2634)
                     /locus_tag="O7798_000851"
     CDS             complement(2374..2634)
                     /locus_tag="O7798_000851"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498995.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDC2863120.1"
                     /translation="MSALLYNGDKDISHERESRCINMLFVILVLYVTGIAFILLSVFG
                     SKTEGLSTKHTLYTIGSAIITIAIFISIGYAIQYLTAALYGL"
     gene            2753..3955
                     /locus_tag="O7798_000852"
     CDS             2753..3955
                     /locus_tag="O7798_000852"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498996.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GTP-binding protein"
                     /protein_id="HDC2863121.1"
                     /translation="MAKIPVTVLSGYLGSGKTTLLNHILQNREGRRIAVIVNDMSEVN
                     IDKDLVADGGGLSRTDEKLVELSNGCICCTLRDDLLKEVERLVKKGGIDQIVIESTGI
                     SEPVPVAQTFSYIDDELGIDLTAICRLDTMVTVVDANRFVHDINSEDLLMDRDQSVDE
                     TDERSIADLLIDQVEFCDVLIINKIDLISEEELAKLEKMLSALQPTAKIIKTTNSEVD
                     LKEVLNTQRFDFEKASESAGWIKELESGGHASHTPETEEYGISSFVYKRRLPFHAKRF
                     NDWLESMPNNVVRSKGIVWLAQYNHVACLLSQAGSSCNIHPVTYWVASMSEAQQTQIL
                     AERQDVAAEWDPEYGDRHTQFVIIGTELDEEKLTKELDACLVNAQEIDADWQQFEDPY
                     QWQIRPAR"
     gene            complement(4614..4676)
                     /locus_tag="O7798_000853"
     CDS             complement(4614..4676)
                     /locus_tag="O7798_000853"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014532416.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phenol-soluble modulin PSM-alpha-4"
                     /protein_id="HDC2863122.1"
                     /translation="MAIVGTIIKIIKAIIDIFAK"
     gene            complement(4740..4808)
                     /locus_tag="O7798_000854"
     CDS             complement(4740..4808)
                     /locus_tag="O7798_000854"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014373779.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phenol-soluble modulin PSM-alpha-3"
                     /protein_id="HDC2863123.1"
                     /translation="MEFVAKLFKFFKDLLGKFLGNN"
     gene            complement(4860..4925)
                     /locus_tag="O7798_000855"
     CDS             complement(4860..4925)
                     /locus_tag="O7798_000855"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014373780.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phenol-soluble modulin PSM-alpha-2"
                     /protein_id="HDC2863124.1"
                     /translation="MGIIAGIIKFIKGLIEKFTGK"
     gene            complement(4957..5022)
                     /locus_tag="O7798_000856"
     CDS             complement(4957..5022)
                     /locus_tag="O7798_000856"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014373781.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phenol-soluble modulin PSM-alpha-1"
                     /protein_id="HDC2863125.1"
                     /translation="MGIIAGIIKVIKSLIEQFTGK"
     gene            5543..7027
                     /locus_tag="O7798_000857"
     CDS             5543..7027
                     /locus_tag="O7798_000857"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498998.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH dehydrogenase subunit 5"
                     /protein_id="HDC2863126.1"
                     /translation="MLSFQLLFSLFVIALIIALISGLLFLAPVMPMRYIKLHLYILVM
                     PVLFAVIGFFGIHGQHVLGPFKIDRLSWLLAGFVMALGFIIQKFSMRYLLGDHHYRHY
                     FPLFTAITSFASLAWMSEDLRLMALCWGITLLCLTLLMNVNRFWKVPRESAKLSSMTF
                     LCGWLAFVGAIVTIYIATGEWRVPQHIVHPTWSLLTNVLLVLAVMIPAAQFPFHRWLI
                     ESVTAPTPVSAIMHAGIVNAGGVILTRFAPIFDNGFALSLLLILSSISVLLGSGISLV
                     QVDYKRQLVGSTMSQMGFMLVQCALGVYSAAIIHLILHGIFKATLFLQSGSIVKRFNI
                     PKQASAKDAYGWIVMGRVLAIIVAFLFWMSSDRSAYEVLSALILGWSLLVSWNQMVAF
                     SKGRMARLVGMILIAIVTFIYVITHNYFYAVLQNITTHATTPPTVSVIISVVILIFGS
                     LLSIWVARHRYSKAFAVLYVWLVNLGEARSKAIESHPNYLKKYL"
     gene            7040..9745
                     /locus_tag="O7798_000858"
     CDS             7040..9745
                     /locus_tag="O7798_000858"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498999.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YbcC family protein"
                     /protein_id="HDC2863127.1"
                     /translation="MTTQLNINSVIENAKRVITPLSPISIFAARNPWEGLEADTFEDV
                     AKWLRDVRDVDIFPNKALIESAVARGELDESVFNQLVTDMLLEHHYNIPQHYINLYID
                     NIKTLKDVPASYMNHSNVDVVADLLLEKSKRDMAESYHHYDVRPMSDAIIDEQGEPLS
                     EQVNRQMIKWTKLYIDQFLSSWTMPKREQSFYHAWLHLAQHDHSFTKAQRQVIKGLPN
                     DPEMTIESVLTHFSIDQEDYQAYVEGHLLALPGWAGMLYYRSQQHHFEQHLLTDYLAI
                     RLVVEQLLVGDEFKSVAKDCESRSENWFKQTVASWCYYSDMPSDVLLQHDVNEIQTFI
                     HFAATMNKNVFKNLWLIAWEMTYESQLKQKIKAGHESVAGALDVNQVNVSENDNANQP
                     HSVLLNDTQAVDENNSELNQMGTSTKAQIAFCIDVRSEPFRRHIEAAGPFETIGIAGF
                     FGLPIQKDAVDEQFKHDSLPVMVPPAYRIKEFADRYDMNVYRQQQQTMSSMFYTFKLM
                     KNNVMPSLLLPELSGPFLSLSTIVNSIMPRKSRASLQKIKQKWLKKPETKLTIDREFD
                     RTSDLPVGFTEQEQIDFALQALKLMDLTEAFAPFVVLAGHASHSHNNPHHASLECGAC
                     GGASSGFNAKLLAMICNRPNVRQGLKQSGVYIPETTVFAVAEHHTSTDTLAWVYVPDT
                     LSSIALDAYESLNDAMPMISEHANRERLDKLPTIGRVNHPVEEAQRFASDWSEVRPEW
                     GLAKNASFIIGRRQLTKGIDLEGRTFLHNYDWRKDKDGTLLNTIISGPALVAQWINLQ
                     YYASTVAPHFYGSGNKATQTVTSGVGVMQGNASDLMYGLSWQSVMAADRTMYHSPIRL
                     LVVIQAPDYVVARLLANNEHFARKVSNHWLRLMSVNEEGRFKSWI"
     gene            9907..10269
                     /locus_tag="O7798_000859"
     CDS             9907..10269
                     /locus_tag="O7798_000859"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499000.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2294 domain-containing protein"
                     /protein_id="HDC2863128.1"
                     /translation="MKRTKGEIEAEISKAITQWEKDFLGRGSLSVKSDILRDMVIISL
                     QGILTPAEYRVCSTNEGLLNIKRTRSELVESGEQDLNDIIFKITGIKVMSFHSDLSTV
                     TGERIIVFKLEDNLEKHI"
     gene            complement(10498..10914)
                     /locus_tag="O7798_000860"
     CDS             complement(10498..10914)
                     /locus_tag="O7798_000860"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499001.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDC2863129.1"
                     /translation="MLSIISMCHKFHFTDNIKIIKFILLCILQIKHCIIEITIFCYFQ
                     FSTIYIYYTEGVRRINRVIFVYIALIITLVRFFTPIHPSFSNLIYWIFVLYFIPIILC
                     VIGFKAEKLIATMVIIPNFLGILYRLYAYVTHILFM"
     gene            10952..11626
                     /locus_tag="O7798_000861"
     CDS             10952..11626
                     /locus_tag="O7798_000861"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499002.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphatase PAP2 family protein"
                     /protein_id="HDC2863130.1"
                     /translation="MIDKKLTSPKMTVPLFLIALIVFIGMFYSVVTNQEWLKNIDMGS
                     LTWFTDYFGEPQRQYVNNLFNYYMTFSAEIGDVKGVVLISIIVTIILFIKQRHLAVWF
                     VTYLVSGVIMNKLIKDTVLRPRPYNHLAVDTGFSFPSGHSNASTLLYFALMIIIISLA
                     AKTITKVLSALVMGILWLSILFCRLYFHAHYFSDVIGGTSLAIIWVALFLMVYPYFIN
                     HRRQRV"
     gene            11663..12397
                     /locus_tag="O7798_000862"
     CDS             11663..12397
                     /locus_tag="O7798_000862"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499003.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxylesterase"
                     /protein_id="HDC2863131.1"
                     /translation="MRIKTPSPSYLKGTNGHAILLLHSFTGTNRDVKHLAAELNDQGF
                     SCYAPNYPGHGLLLKDFMTYNVDDWWEEVEKAYQFLVNEGYESISATGVSLGGLMTLK
                     LAQHYPLKRIAVMSAPKEKSDDGLIEHLVYYSQRMSNILNLDQQASSAQLAAIDDYEG
                     EITKFQHFIDDIMTNLNVIKMPANILFGGKDAPSYETSAHFIYEHLGSVDKELNGLKD
                     SHHLMTHGEGRDILEENVIRFFNALT"
     gene            12575..12688
                     /locus_tag="O7798_000863"
     CDS             12575..12688
                     /locus_tag="O7798_000863"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499004.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDC2863132.1"
                     /translation="MGIAPEVVMWRDVGDIDGVVCGEILAHVYSVEPENLM"
     gene            12853..14190
                     /locus_tag="O7798_000864"
     CDS             12853..14190
                     /locus_tag="O7798_000864"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499005.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sodium-dependent transporter"
                     /protein_id="HDC2863133.1"
                     /translation="MKRQQSQWKSSTGFILASAGSAIGLGAMWKFPYMAGIYGGGAFL
                     AMFLIFTIFVGLPLLIMEFTVGKMGRTYTTQIYSKLTGKKWLNIIGWNGNLAVFILFG
                     FYSVIGGWIVIYIGQVLWQLVIFQRINHLQEMNFEAVISNPWLTVLGQGIFIFATMII
                     VMLGVEKGLEKASKVMMPLLFVFLIVIVIKSLTLDGALEGVKFILQPRVSEITADGIL
                     FALGQSFFTLSLGTTGMITYASYASKDMTIKSSAISIVVMNIFVSVLAGLAIFPALHS
                     FGYEPQEGPGLLFKVLPMVFSQMHLGTLFYLGFLVLFLFAALTSSISLLELNVSNFTK
                     NDNTKRKKVAVIGSILVFIISIPATLSFGILKGVRFGAGTIFDNMDFIVSNVLMPLGA
                     LGTTLVVGQLLDKKLLQQYFGKDRFRLFSGWYYLIKYAMPVVIILVFIVQLFS"
     gene            14407..15321
                     /locus_tag="O7798_000865"
     CDS             14407..15321
                     /locus_tag="O7798_000865"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499006.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine synthase family protein"
                     /protein_id="HDC2863134.1"
                     /translation="MITYDLIGNTPLVLLEHYSDDKVKIYAKLEQWNPGGSVKDRLGK
                     YLVEKAIQEGRVRAGQTIVEATAGNTGIGLAIAANRHHLKCKIFAPYGFSEEKINIMI
                     ALGAEVSRTSQSEGMHGAQLAARSYAEKYGAVYMNQFESEHNPDTYFHTLGPELTSAL
                     QQIDYFVAGIGSGGTFTGTARYLKQHHVQCYAVEPEGSVLNGGPAHAHDTEGIGSEKW
                     PIFLERRLVDGIFTIKDQDAFRNVKSLAINEGLLVGSSSGAALQGALNLKAQLSEGTI
                     VVVFPDGSDRYMSKQIFNYEENNNEQEN"
     gene            15305..16447
                     /locus_tag="O7798_000866"
     CDS             15305..16447
                     /locus_tag="O7798_000866"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499007.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional cystathionine
                     gamma-lyase/homocysteine desulfhydrase"
                     /protein_id="HDC2863135.1"
                     /translation="MNKKTKLIHGGHTTDDYTGAVTTPIYQTSTYLQDDIGDLRQGYE
                     YSRTANPTRSSVESVIATLENGKHGFAFSSGVAAISAVVMLLDKGDHIILNSDVYGGT
                     YRALTKVFTRFGIEVDFVDTTHTDSIVQAIRPTTKMLFIETPSNPLLRVTDIKKSAEI
                     AKEHGLISVVDNTFMTPYYQNPLDLGIDIVLHSATKYLGGHSDVVAGLVATSDDKLAE
                     RLAFISNSTGGILGPQDSYLLVRGIKTLGLRMEQINRSVIEIIKMLQAHPAVQQVFHP
                     SIESHLNHDVHMAQADGHTGVIAFEVKNTESAKQLIKATSYYTLAESLGAVESLISVP
                     ALMTHASIPADIRAKEGITDGLVRISVGIEDTEDLVDDLKQALDTL"
     gene            16741..17766
                     /locus_tag="O7798_000867"
     CDS             16741..17766
                     /locus_tag="O7798_000867"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499008.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methionine ABC transporter ATP-binding protein"
                     /protein_id="HDC2863136.1"
                     /translation="MIEFRQVSKTFNKKKQKIDALKDVSFTVNRNDIFGVIGYSGAGK
                     STLVRLVNHLEAASNGQVIVDGHDITNYSDKMMRDIKKDIGMIFQHFNLLNSATVFKN
                     VAMPLILSKKSKTEIKQRVTEMLEFVGLSDKKDQFPDELSGGQKQRVAIARALVTNPK
                     ILLCDEATSALDPATTASILTLLKNVNQTFGITIMMITHEMRVIKDICNRVAVMEKGK
                     VVETGTVKEVFSHPKTTIAQNFVSTVIQTEPSTSLIRRLNDEQVGDFKDYKIFVEETQ
                     VTQPIINDLIQICGREVKILFSSMSEIQGNTVCYMWLRFNMDQQFEDTAINQYFKEKN
                     IQFEEVH"
     gene            17770..18429
                     /locus_tag="O7798_000868"
     CDS             17770..18429
                     /locus_tag="O7798_000868"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499009.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HDC2863137.1"
                     /translation="MFGSDLDSAQLLQALYETLYMVSIALFLGAVIGIPLGVLLVITR
                     KQGIWPNIVIHQVLNPLINILRSLPFIILLIAIVPFTKLVVGTSIGTTAAIVPLTVYV
                     APYIARLVENSLLEVDEGIIEAAKAMGASPLQIIRYFLIPEALGSLVLAITTAIIGLI
                     GSTAMAGAVGGGGIGDLALVYGYQRFDTTVIIITVIVLVIIVQVIQTLGNVLARFIRR
                     H"
     gene            18466..19308
                     /gene="gmpC"
                     /locus_tag="O7798_000869"
     CDS             18466..19308
                     /gene="gmpC"
                     /locus_tag="O7798_000869"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499010.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dipeptide ABC transporter
                     glycylmethionine-binding lipoprotein"
                     /protein_id="HDC2863138.1"
                     /translation="MKRLIGLVIVALVLLAACGGNNDKKVTIGVASNDTKAWEKVKEL
                     AKKDDIDVEIKHFSDYNLPNKALNDGDIDMNAFQHFAFLDQYKKAHKGTKISALSTTV
                     LAPLGIYSDKIKDVKKVKDGAKVVIPNDVSNQARALKLLEAAGLIKLKKDFGLAGTVK
                     DITSNPKHLKITAVDAQQTARALSDVDIAVINNGVATKAGKDPKNDPIFLEKSNSDAV
                     KPYINIVAVNDKDLDNKTYAKIVELYHSKEAQKALQEDVKDGEKPVNLSKDEIKAIET
                     SLAK"
     gene            19640..20644
                     /gene="aaa"
                     /locus_tag="O7798_000870"
     CDS             19640..20644
                     /gene="aaa"
                     /locus_tag="O7798_000870"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499011.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="autolysin/adhesin Aaa"
                     /protein_id="HDC2863139.1"
                     /translation="MQKKVIAAIIGTSAISAVAATQANAATTHTVKPGESVWAISNKY
                     GISIAKLKSLNNLTSNLIFPNQVLKVSGSSNSTSNSSRPSTNSGGGSYYTVQAGDSLS
                     LIASKYGTTYQNIMRLNGLNNFFIYPGQKLKVSGTASSSNAASNSSRPSTNSGGGSYY
                     TVQAGDSLSLIASKYGTTYQKIMSLNGLNNFFIYPGQKLKVTGNASTNSGSATTTNRG
                     YNTPVFSHQNLYTWGQCTYHVFNRRAEIGKGISTYWWNANNWDNAAAADGYTIDNRPT
                     VGSIAQTDVGYYGHVMFVERVNNDGSILVSEMNYSAAPGILTYRTVPAYQVNNYRYIH
                     "
     gene            complement(20829..21098)
                     /locus_tag="O7798_000871"
     CDS             complement(20829..21098)
                     /locus_tag="O7798_000871"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499012.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDC2863140.1"
                     /translation="MAKRSKSQRLSSLLNVAGFIVDGYNGYKYHAKNKKLVYLSLGLS
                     TVGTVLDFYISIKSPRKFKKAVAVVTLITNGARLFTSIRKVKHEY"
     gene            21247..21642
                     /locus_tag="O7798_000872"
     CDS             21247..21642
                     /locus_tag="O7798_000872"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499013.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NUDIX domain-containing protein"
                     /protein_id="HDC2863141.1"
                     /translation="MIKCVCLVEETADKILLVQVRNREKYYFPGGKIEEGESQVHALL
                     REVKEELNLTLTMDEIEYVGTIVGPAYPQQDMLTELNGFRALTKIDWENVTINNEITD
                     IRWIDKDNDALIAPAVKVWIETYGGKHDK"
     gene            21632..22117
                     /locus_tag="O7798_000873"
     CDS             21632..22117
                     /locus_tag="O7798_000873"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499014.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HDC2863142.1"
                     /translation="MTNNDTIMLRHYVPQDYSMLEAFQLSESDLKFVKTPEENITAAM
                     SDNERYPIVVMDGRQCVAFFTLHRGKGVAPFSDNQDAVFFRSFSVDQRYRNRGIGKVV
                     MEKLASFITSTFQDINEIVLTVNTDNPHAMALYRQQGYQYMGDSMFVGRPVHIMALTI
                     K"
     gene            complement(22286..23068)
                     /locus_tag="O7798_000874"
     CDS             complement(22286..23068)
                     /locus_tag="O7798_000874"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499015.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YibE/F family protein"
                     /protein_id="HDC2863143.1"
                     /translation="MNAVFILALLLLFLMIIFGGKKGFISYLTLFLNFAILIISIVLI
                     IFGVPIYVVTFFFCIIIGACNLFVLNSYNVKTQAAFISTIVTTILLITLIYLSVYFGH
                     LQGFSTEQQDETYVYSMNIGIDMVQFMVFTIILAVIAAVIDLTITISSPIYELHQVNP
                     TLTQYELFQSGMRVGREILATSANTIYLAFFGGQLALFIWFFKLKYSFGHIINSKIFA
                     QEFISIILGGIAVAISIPITAWITAFLIKRPSRQRKNDESIN"
     gene            complement(23065..24141)
                     /locus_tag="O7798_000875"
     CDS             complement(23065..24141)
                     /locus_tag="O7798_000875"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002512043.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YibE/F family protein"
                     /protein_id="HDC2863144.1"
                     /translation="MILGLFCIAFIGAILFTFNNENFYNKPIGQIIDVKHVSSTPTKD
                     AQNNRDIKYKNQLKVKILNGQFAGETTTINHQYVKSQADSEAFRTHEKVLLHISNKPS
                     DAYIIEKKRDTLTVIITGLFLLTVLLVGRKVGLQSILSLILNSIAILIAIYIHIQHSN
                     INLFLLMTIAMICSTILTLLLVTGWHMRTLITIASTIIGTFLSIGLTELIIYMTDGKG
                     IKYETMNFLSLPPKDIFLASVLIGSLGAIMDVAITIASGMHEILQRTPHISMRRWALA
                     GRNIGQDIMGTMTNILLFSYLSGALPMFLIFLKNANTVTYTISMNWSLEIARALTGGI
                     GIVLTIPITILFMEIFETLRRAKQ"
BASE COUNT         8201 a         3581 c         4751 g         7610 t
ORIGIN      
        1 gctcagtagg atataaaaaa atagaatata aattttcaaa agataaaggt caagagacaa
       61 cattaagaga ttatttgaat tttggaccgt ctgaaggtga gaatgttgag taggaagtat
      121 aaaatagatt taaaagcaat taatcaaaat actgagtcta caagtgctat ttcgaaagcg
      181 tcatacgaag ttgagaatgc taataataat ggtctatcaa aaagagacgt gattaatcaa
      241 tttaatgatt tgaaaaaaat gaaaaaattc ccttctaatc ttgaatatgt tgatagttac
      301 actgattctc ttactggagt aacaacttct gcttttttaa ataaagatac aggcaaagta
      361 actctcggga tgactgggac taatttacaa gacgaagcct ttaaaaagtt aaaagaaggt
      421 gaattttcaa gacaaaatgt taccaatgct ttggaaacag ttaaagatgg atatgcagat
      481 cttaaaatat tatattctcc tgcatctgat caaaactata gatatgcgaa tacacaagaa
      541 tttataaata aaataaaaag taagtatgac attgatttta ttactggaca ttcactaggt
      601 ggaagagatg cggtagttct aggaatgagt aatggtattc cgaacattgt ggtttataat
      661 ccggctccta tttctataac tagtttgaat cctaattccc cagatggaaa acgtttatta
      721 gaattatata aaaattataa aggtaatatt actaggtttg ttgcagaaaa tgatgcattg
      781 acagaaaatc tgaagaaata taagcattat gtttttttcg gtaatgataa agtctttaaa
      841 aatggtaaag gtcatgaaat ggaaggcttt ctgaccgaag aagaacaaaa agctataaaa
      901 aaagaactta aaaaactaca aggttatgca gaagaaaata ataagtcatt tgtaaagaat
      961 tcaaataatg ctatctctaa attagctagt atagaattac ttagagcaaa tatgatgact
     1021 acaaatggag gaggattatc ttcttcgcag caaaaagttt tagaaagttt aacagcttta
     1081 acaattgcgc agtcattcag tcaactgata gacgatgaaa ttaatcaaat caaaaaaatg
     1141 tataatgaaa agaaaaagaa atttggaaaa aattgggaag acgctcaaaa agctggaaaa
     1201 gctgtaggtg aagatttgag tgtaaatgga gttctcaatg ctttagatga aggtcaagtg
     1261 aatgaaagta gtatggtaag agaacctgaa caaatgatat ctgcaaaaga aagacaactt
     1321 tcaacgatag ggtcttctgt atcaaattat attatgagag ttagactcag tattaatgaa
     1381 atcgttgata aagatcaagt gcttgcatca caaataggtg gattactatg atgtttaatc
     1441 aaattaataa taaaaatgaa ttagaagaat catatgaatc tgagaaaaaa cgtatagaga
     1501 atgaactgca aaatttaaat gaacttaggc atagaactcg aaaagaaaat gaacgtagtt
     1561 atgatgtttt tcaatatttg aagcacgaaa tgaattatag tgaagatgcc caaaggaaaa
     1621 tgacgagaaa tatagaagcg tatgagcaag aaatcaatga gataattaga aagcaagaat
     1681 ggaaattaga agaatataaa gaagacttaa aaaagtctta tgaaaagcag ttagataagc
     1741 taagtgactg ataatttgga ggagattaaa tgactctaat agaaccagat atgaccttaa
     1801 gaatgccaga tataagtact acagtagaaa cacttaatct catatctaaa atggaagcgc
     1861 aaaaagaaaa tattcgcaca gttattgcac ctgaacataa gcataaatac aaagatattg
     1921 aaaacggatt aaaaggtgaa gaaaaagtat taattgaaca aatggcgcaa cattgcgaag
     1981 cttttaaagc taattttaaa ggtgcagctc aaggagattg ggttaaaagt gccatgtctg
     2041 agatagacag cattaaggat gacctgaaaa aaattaatag ctaaactaca tatcatacta
     2101 ctaaataaag cgaccaatgt tcagtatatt cacaactgac actaggccgc ttctttttaa
     2161 tttatattat tcccatgtaa agtaattcga accgaatcga aatatcacac tctcaattgt
     2221 aaaaaaacaa cttaaattac tgtcccgcat taaacatgac cacattcgta acagcaacaa
     2281 taaaaatcct caagtactaa aagctatgat cactttatca aaatcaacgc aagttaacct
     2341 ctcccgaact acccgttact catcaccttc accttacaaa ccataaagcg ctgcagttaa
     2401 gtattgaatg gcatagccaa ttgaaatgaa aatagcaatc gttataatag cactgccaat
     2461 ggtatataaa gtatgtttcg tagataatcc ttcagtcttt gaaccaaaaa cactgagtag
     2521 aataaatgca ataccagtaa catataaaac taaaatgaca aataacatgt ttatacacct
     2581 cgattctctt tcgtgagata tatctttgtc tccattataa agtaaagcgc tcaataattt
     2641 aattaagtat actatttttt tattatcgaa gattgcgaaa gaggaaacgc tcctatataa
     2701 tgtaaaacgg aattattcct atttacaaat aaattgaagt gagggtatat atatggctaa
     2761 aattccagtt acggtattaa gtggttattt aggctcgggg aagacaacgt tgttaaatca
     2821 tattttacaa aatcgagaag gtcgacgtat cgcggtaatt gtaaatgata tgagtgaagt
     2881 aaatatcgat aaagatcttg tcgcagatgg tgggggacta tcgcgtacag atgaaaaatt
     2941 agtcgaactt tctaatggtt gtatctgttg tacacttaga gacgatttat taaaagaagt
     3001 tgagcgttta gtgaaaaaag gtggcatcga tcaaattgtt attgagtcaa cagggatttc
     3061 agagccagta cctgttgcac aaactttctc atatattgat gatgaacttg gcattgatct
     3121 tacagcgatt tgccgtttag atacaatggt tacagttgtg gatgctaacc gcttcgtaca
     3181 tgacatcaac tcagaagatt tattgatgga tcgtgatcaa agcgttgacg aaacagatga
     3241 gcgttcgatt gctgatttat taattgacca agttgaattt tgtgatgtat tgattattaa
     3301 taaaattgat ttaattagtg aagaagaact agcgaagtta gaaaaaatgt taagcgcatt
     3361 gcaaccgact gctaaaatta ttaagacaac aaattctgaa gtagatttaa aagaagtctt
     3421 gaatacgcag cgttttgatt ttgaaaaagc gagcgagtca gcaggatgga tcaaagaact
     3481 tgagtctggt gggcatgcat cgcatacacc tgaaacagaa gaatatggta tatcatcgtt
     3541 tgtatataaa cgtcgtctac ctttccatgc taaaaggttc aatgattggt tagaaagcat
     3601 gccaaataat gtcgttcgat caaaaggtat cgtatggcta gcacaataca atcacgtagc
     3661 atgtttatta tctcaagcag ggtcatcttg caatattcat ccagttacat attgggtggc
     3721 tagtatgtct gaagcgcaac aaacacaaat attagcagaa cgtcaagatg tcgcagctga
     3781 atgggatcca gaatatggcg atcgtcatac acaatttgtc attattggta cagaattaga
     3841 tgaagaaaaa ttaacaaaag aactcgacgc atgcttagtc aatgcgcaag aaattgatgc
     3901 agattggcaa caatttgaag atccatatca atggcaaatt agaccagcac gataagttga
     3961 atgaagtata atcatttttg aattgtggct taattgtttg caatttatga caattaataa
     4021 aaagttaagg tgttcttagg atctttttgt tttcaatcta tctaaagtgt gatagttttg
     4081 ataaagcaga aatttgcatt ttatccatag ggctaggaca tgtatgtgtc ttagtccttt
     4141 ttatatttac gttgatgaaa aatggcaaaa ccattgtacc aactgttaat tgaaggtaca
     4201 atcattgttt aacagtcata aaaatgagtg aagtaaatgc agctatcaat gtactattaa
     4261 cacttacggt cacacgagtg tttcagtcta aacgtgcaac gcaattccgc acgtggccaa
     4321 tatatcttgc gctagatcat gaaaatcatt aagatttcgc atgccaaatc atgaatgtct
     4381 cagaactcga gtatcaaaca taaaacacgc cacaaaaata taacgcgtca gactacaaag
     4441 atcacgaata ttccgtatgt cccactaaga acgtcctata caaaaaacac caagaccatt
     4501 tatttgcaac aaactaacaa gactcacctc acatcaataa atcaacacaa agcaaagcca
     4561 ccatccctat tggtatagtg gcctgagaat tttaagtatt caattcgctt aaattatttt
     4621 gcgaaaatgt cgataattgc tttgatgatt ttaatgatag tacctacaat agccatcgtt
     4681 ttgtcctcct gtatgttgat ttaacatagt gatgagttgt tgatcgttaa tgtttgagat
     4741 tagttgttac ctaaaaattt accaagtaaa tctttaaaga atttgaataa ttttgctacg
     4801 aattccatgt gaatggcccc cttcaaataa gatgttcata tctatgagat ttttataact
     4861 tacttaccag tgaatttctc aattaatcct ttaatgaatt taatgattcc tgcaatgata
     4921 cccatgtgaa agacctcctt tgtttgttat gaaatcttat ttaccagtga attgttcgat
     4981 taagcttttg ataactttaa tgatgccagc gatgataccc attaagatta cctcctttgc
     5041 ttatgagtta acttcattgt acatagttat cttgtgcgta attgattttt ttcctaactt
     5101 gaattgttat gatcataact gcgaattttt tattttaaaa ggacgggaaa tactgcctaa
     5161 ctgtacaggt gcatttacaa aatctttaca atcattggtt taatagaggt taagctcatg
     5221 aatttgacat gaagcagaaa tttaattata ttttatgtta taagtttaaa acgaataaca
     5281 cgttaggtct cgtctaggca aagcatattt atgaagatga attgaacaga cagaagtaac
     5341 attttatata catatgtgca tgggagcacg cttaaagaga acactgcaac aaggtatatc
     5401 aacgtaccgt gatgcagtgt ctagttaaac tgaaacctgc aatagtaaat tttctgccat
     5461 tatgtacaga atctactatt gtaggttttt atttttatac ataagcaatt atgcgagaga
     5521 ttagaaataa ggaggttatg cagtgttaag ttttcaattg ctattttcac tgtttgttat
     5581 tgcgcttatc attgcattga taagtggctt gttgttttta gcaccagtta tgccaatgag
     5641 atatattaaa ttacatttat acatactagt catgccagta ttatttgcag tcattggctt
     5701 tttcggtatt catggtcaac atgtcttagg tccatttaaa atagatcgtt tatcttggtt
     5761 attagctggc tttgtaatgg cgcttggctt tattattcaa aagttttcaa tgcgatattt
     5821 actaggtgat catcattata gacattactt tccattgttc actgcgatta cgtcgtttgc
     5881 atctttagca tggatgtctg aagacttaag actgatggca ctctgctggg gtattacatt
     5941 attatgttta acattgctga tgaacgttaa tcgtttttgg aaagtgccac gtgagtctgc
     6001 gaaattatca agcatgacat ttttatgtgg ttggcttgca ttcgttggag caattgtaac
     6061 tatttatatt gcgactggcg agtggcgggt accacaacat atagttcatc cgacatggtc
     6121 attgttgacg aatgtactac ttgtattagc tgtcatgata ccggcagcac aatttccttt
     6181 tcatcgatgg ttgattgaat ctgtaacggc accaacgcca gtatcggcaa ttatgcatgc
     6241 aggaattgtg aatgcaggtg gtgttattct aactcgtttt gcgccgatat ttgataatgg
     6301 atttgcgtta tcattattac ttatcctttc tagtatttct gtattgttag gatcgggtat
     6361 tagcttagtt caagttgact ataaacgcca attagtgggc tctacgatga gtcaaatggg
     6421 ctttatgtta gttcaatgtg cattgggtgt atattcagca gcgattattc atttaatatt
     6481 gcacggtatt tttaaagcaa cattattttt acaatcaggt tctatcgtga agcgattcaa
     6541 tattccaaaa caagcatctg ctaaagacgc ttatggctgg attgtcatgg gacgtgtatt
     6601 agctattatc gtggcatttc tattttggat gagtagtgac agaagtgcat atgaagtgtt
     6661 aagtgcactc attctaggat ggtcattact tgtatcttgg aatcaaatgg tagcctttag
     6721 taaaggacgc atggcacgtc ttgttggtat gattttgatt gcaatcgtga catttatcta
     6781 cgtcatcaca cataattatt tttacgctgt attacaaaat ataacaacac atgcgacaac
     6841 gccgcctaca gtgagtgtca tcattagtgt tgttatttta atctttggca gtttattaag
     6901 tatttgggtg gcgcggcatc gatactctaa ggcttttgcg gtattgtacg tgtggttagt
     6961 taatctaggt gaagcacgct cgaaagcgat agaaagtcat ccgaattatt tgaagaagta
     7021 tttataggag gtgaaaggta tgacaacaca gttaaatatc aattcagtca ttgaaaatgc
     7081 gaaacgtgtt attacaccat tatcaccaat ttcgattttt gcagcacgaa atccatggga
     7141 aggattagaa gcggatacgt ttgaagatgt cgcaaaatgg ttacgtgatg ttcgagatgt
     7201 ggatattttc ccaaataaag cattaataga aagcgctgtg gcacgtggtg aattagatga
     7261 aagtgtcttt aatcaacttg ttactgatat gttacttgaa catcactaca atatcccgca
     7321 acactacatc aatctttata ttgataacat taaaacatta aaagacgtac ctgcatcata
     7381 tatgaatcat tcaaatgttg atgttgttgc tgatctacta ttagaaaaat caaaacgtga
     7441 tatggctgaa tcatatcatc actatgatgt acgtccgatg agtgatgcaa taatagatga
     7501 acaaggtgag ccacttagcg aacaagtgaa tcgtcaaatg attaaatgga cgaaacttta
     7561 tatcgatcaa tttctatcga gttggacaat gccgaagcgt gagcaaagtt tttaccatgc
     7621 atggttgcat ttagcgcaac atgaccatag ttttactaaa gcacagcgcc aagtgattaa
     7681 aggcttaccc aatgatcctg aaatgacgat agagtcagta ttaactcatt tttcaataga
     7741 tcaggaagac taccaagctt atgttgaagg acatcttttg gcgttaccgg gttgggcagg
     7801 tatgttgtat taccgttcac aacagcatca ctttgaacaa catttgttaa cggattattt
     7861 ggcaattcgg ttagttgtcg aacaattgct agttggtgat gagtttaagt cagtcgctaa
     7921 agattgtgaa agtagatcgg aaaattggtt taagcaaact gttgcatcat ggtgttacta
     7981 cagtgatatg cctagcgatg tattactaca acatgacgtc aatgaaattc aaacgtttat
     8041 tcattttgca gcaactatga ataaaaatgt atttaaaaat ttatggctaa ttgcctggga
     8101 aatgacatac gaatctcagt taaaacaaaa aattaaagca ggtcatgaaa gtgtggcggg
     8161 cgcattagat gtaaaccaag taaatgtctc agaaaatgat aacgctaatc agccacattc
     8221 agtattgtta aatgacacac aagcagttga tgaaaataat agcgagctaa atcagatggg
     8281 cacatcaacg aaagcgcaaa ttgcattttg tatagatgtt cgttcagaac catttcgtag
     8341 acatatcgaa gcagcagggc cctttgaaac gattggtatt gcaggcttct ttggattacc
     8401 tattcaaaaa gatgccgtag acgaacaatt caaacatgat tcattacctg tcatggtacc
     8461 gccggcatat cgcattaaag aatttgcaga ccgctacgat atgaatgttt atcgacaaca
     8521 gcaacagaca atgtcatcga tgttttacac atttaaattg atgaaaaata atgtcatgcc
     8581 tagtctgtta ttgcctgaat taagtgggcc atttttaagc ttaagtacca ttgtcaattc
     8641 gattatgcct agaaaaagtc gcgcgtcttt acaaaaaata aaacaaaagt ggttgaaaaa
     8701 gcctgaaaca aagttgacga ttgatcgtga gtttgaccga acatcagact tacctgttgg
     8761 atttactgag caagagcaaa ttgatttcgc gttacaagcg ttgaaattga tggatttaac
     8821 cgaagcattt gcgccgttcg ttgtgttagc aggtcatgct agtcattctc acaataatcc
     8881 acatcatgca tcacttgaat gtggggcttg tggtggcgca tcaagcggtt ttaatgctaa
     8941 gttattagcg atgatatgta atcgtccaaa tgtcagacaa ggattaaaac aatcaggtgt
     9001 gtatattcca gagacaactg tttttgcggt agcagaacat catacgtcta ctgatacgtt
     9061 ggcatgggta tatgtgccag acacattatc ttctattgct ttagatgcat atgaatcatt
     9121 gaatgacgcg atgccgatga tttctgaaca cgcgaatcgc gaacgtttgg acaaactgcc
     9181 aacgattggt cgtgtgaatc atccagtgga agaagcgcag cggtttgcga gtgattggag
     9241 tgaggtacgt ccagaatggg gattggctaa aaatgcatca tttataattg gacgacgcca
     9301 attaacaaaa ggcattgatt tagaagggcg gacattttta cacaattatg attggcgtaa
     9361 agataaagat ggcacattat taaataccat catttctggt ccggcacttg tggcacaatg
     9421 gattaattta caatattatg cgtcgacagt tgcgccgcat ttttacggaa gtgggaataa
     9481 agcgacacaa accgtcacgt caggtgttgg tgtcatgcaa ggtaatgcga gtgatctgat
     9541 gtatggctta tcatggcaat ctgttatggc tgctgatcgg acgatgtatc attcgccaat
     9601 tcgtttactt gtcgttattc aggcacccga ctatgttgta gcaagactac tcgcgaataa
     9661 tgagcatttc gctaggaagg tgtctaatca ttggctgcgt ttaatgagcg ttaatgagga
     9721 agggcgtttt aaaagttgga tttaacgatg atatgttgcg atgctaagta actaatatat
     9781 catcatatct acaatgttct agcttcttaa aatatactaa aaatgataaa cttaatgtaa
     9841 tagttgatgt cgtgataacg atacaaagat gaagtaatca attttaatat tattggagtt
     9901 agtgatatga aaagaacgaa aggtgaaatc gaagctgaaa tcagtaaagc cattacgcaa
     9961 tgggaaaaag atttccttgg cagaggttcc ttgtcagtta aatcagacat tttaagagat
    10021 atggtgatta ttagtttaca aggtatctta acgccagctg aatatcgtgt atgtagtacg
    10081 aatgaaggat tattaaatat taaacgaaca cgttctgaat tagttgaatc cggtgagcaa
    10141 gatttgaatg atatcatttt taaaattaca ggtatcaaag tgatgagctt ccatagtgat
    10201 ttaagtacag ttacaggtga acgtattatc gtattcaaac ttgaggataa tttggaaaag
    10261 catatttaag aaggttaggt atgcttctgc tggcttatta aagctataga agtatgcttg
    10321 gttaaacagc gcaacgccat atatttgggt gtgctgtttt tctattacat gatgtgttta
    10381 ttacgtggat gaatgcgtgg gtctgaatat agcccgtgaa aggcgtatgt cataaaattt
    10441 gcgaatggtg acaagtcgac gcaagcatat ttgttgcgag acatgcccac tatcctttta
    10501 cataaagagt atatgtgtga cgtaggcata taatcgataa agtattccta aaaaattagg
    10561 tataatgacc attgttgcaa taagtttttc ggccttgaaa ccgataacgc atagtataat
    10621 aggaataaaa tataatacaa atatccagta aatcaaattt gaaaatgatg gatgaatagg
    10681 ggtaaagaat ctaactaatg taatgattaa cgctatatag acaaaaataa ctctattgat
    10741 acgccttacc ccctctgtat aataaatata aatcgtacta aattgaaaat agcaaaatat
    10801 tgttatttca attatacaat gttttatttg caatatacat aacaatatga actttataat
    10861 tttgatattg tcggtaaagt gaaatttgtg gcacattgat attatggata acatttgtaa
    10921 aatgaaaatg atgatacgag gagattgtaa gatgatagat aaaaaattaa catcaccgaa
    10981 aatgacagtg cctttatttt taatcgcgct gattgtattt ataggtatgt tttacagtgt
    11041 agtgacaaat caagaatggc ttaaaaatat agatatggga tcattaacat ggtttacaga
    11101 ttatttcggt gagccacaac gtcagtatgt taacaatttg tttaattact atatgacgtt
    11161 tagtgcggaa attggagatg tcaaaggtgt cgtgttgatt tccattatcg tcacaatcat
    11221 actgtttatt aaacagaggc atttagcggt ttggtttgtg acatatttgg tttcaggtgt
    11281 catcatgaac aaattaatta aagatactgt attacgtcca agaccatata atcatttagc
    11341 cgttgataca ggcttttcat ttccgagtgg acattccaac gccagcacat tattatattt
    11401 cgccttaatg atcattatta tttcacttgc tgctaagaca ataacaaaag tgttgagtgc
    11461 gttggttatg ggaatattat ggcttagcat attattttgt cgcctttatt ttcatgcaca
    11521 ttacttttca gatgtcattg gcggcacgtc actagcaatc atttgggtag cgttattctt
    11581 aatggtatac ccatacttta ttaatcatcg acgacaacgc gtttagcaaa catctttaga
    11641 catagtggag gtatatagaa aaatgagaat taaaacaccg agtccatcgt atttaaaagg
    11701 cacaaatgga catgcgatat tattattaca ttcatttaca ggtacaaatc gggatgtgaa
    11761 gcatcttgca gctgagttaa atgaccaagg atttagttgt tatgcaccga attatccagg
    11821 tcatggttta ttgttgaaag atttcatgac atataatgta gatgattggt gggaagaagt
    11881 tgagaaagct taccaatttt tagtcaatga aggttatgaa tctatcagtg caacgggtgt
    11941 gtctttaggt ggattaatga cattaaaatt ggcgcaacac tatcctttga aacgtatcgc
    12001 tgtcatgtca gcaccaaagg aaaagagtga cgatggctta atagaacatt tagtttatta
    12061 tagtcaacgc atgtcgaata ttttaaattt agatcagcaa gcatcgagtg cgcaattagc
    12121 agcaattgat gattatgaag gtgaaattac gaagtttcaa cattttattg atgatatcat
    12181 gacaaattta aatgttatta aaatgccagc taatatatta tttggtggta aagatgcgcc
    12241 atcctatgaa acaagtgcac attttattta tgaacattta ggatcagtag acaaagaatt
    12301 aaatggtctg aaggattcgc atcatttaat gacgcatgga gaaggcagag atattttaga
    12361 agaaaatgtt attcgctttt tcaatgcttt aacataattg aagattttaa aaattaacac
    12421 ttgagtgacg atgttattat atttgtcatt tgagtgtttt ttgtggcgtg atagtatagg
    12481 gaacttagct aaagttaatt tgtagtgtga tgtcgtggaa atattatgga gttataccag
    12541 aagttgattt gtattgtaat gtcgtggaaa ttttatgggc attgcacctg aagttgttat
    12601 gtggcgagat gttggggata tagatggtgt tgtatgtggc gagatattgg cgcacgtata
    12661 cagcgttgaa ccagaaaatt taatgtagcg taatgacaac acattacaag agttgattat
    12721 attatgataa atccaggtgc taccgtatta atgaaacaat tttgatgcag gtgtattgca
    12781 tgttatttac atacatgtta gagtgttact taaacacgta gacgctttaa cgctttaaag
    12841 gagatgtgaa tgatgaaaag acaacaatca caatggaagt catcaactgg atttatttta
    12901 gctagtgcgg gttctgcaat cggtcttggt gccatgtgga aattcccata tatggcaggg
    12961 atttatggcg gcggtgcctt tctagctatg ttcttaatat tcaccatttt tgttgggttg
    13021 ccattactca ttatggaatt cactgttggg aaaatgggac ggacatatac aacacaaata
    13081 tatagtaaat taactggtaa aaaatggctc aatatcattg gctggaacgg taatttggca
    13141 gtgtttattt tatttggctt ctatagtgtt atcggtggtt ggattgtcat ttacatcgga
    13201 caagtattat ggcaattagt tatatttcaa cgcatcaatc atctccaaga aatgaatttt
    13261 gaagcggtaa tatcaaatcc ttggttaacc gttctagggc aaggtatatt catattcgct
    13321 acgatgatta ttgtcatgtt aggtgttgaa aaaggattag aaaaggcatc gaaagttatg
    13381 atgccattgc tgtttgtctt tttaatcgtc attgtgatta agtctttaac attagatggc
    13441 gccttagaag gtgtgaaatt tattttacaa ccaagagtat cagagattac tgctgatggc
    13501 atcttgtttg cgctaggtca atcattcttt acgttatcat taggaactac aggtatgatt
    13561 acttatgcga gttatgcctc taaagacatg acgattaagt catcagctat ttctatcgtt
    13621 gttatgaata tctttgtatc tgtattggca ggtctagcta tatttccggc tttacatagt
    13681 tttggctatg aaccacaaga agggcctgga ttattattta aagtactgcc aatggtcttt
    13741 agtcaaatgc atctaggcac attattctat ttgggattct tagtgctgtt cttatttgcg
    13801 gctttaacgt catctatttc tttattagaa ttaaatgttt ctaacttcac gaagaatgac
    13861 aatacaaaac gtaaaaaagt cgcagtgatc ggtagtattt tagtatttat cattagtatt
    13921 ccagcaacct tatcttttgg tatcttaaaa ggtgtaagat tcggtgcggg aacgattttt
    13981 gataatatgg atttcatcgt ttcgaatgta ttgatgccat taggcgcatt aggtactacg
    14041 cttgtcgtag gacaattatt agataaaaaa ttattacaac aatattttgg taaagatcga
    14101 tttagattat tcagtggttg gtattactta attaagtatg cgatgcctgt cgttattatt
    14161 ttagtcttta tcgtgcaatt atttagttaa tatatagaag catctgacac acaagtattt
    14221 gtgttgctca ggtgtttttt tgtttggaat tgaaaattta gtactggttc tgaattaatc
    14281 gaaacttaga taattgcaaa ataacaaaat gtcgtttata attcttatct gaaaagtaag
    14341 aattaaaatt gagacatgaa gaaaggtttc attcatttga tcggcatgtc agatgagggt
    14401 gcatctatga ttacttatga tttaattggc aatacaccat tagtactgtt agaacattat
    14461 agtgatgata aagttaaaat ttatgccaag cttgaacaat ggaatcctgg aggcagtgtt
    14521 aaagacagac tcgggaaata tttagtagag aaggcaattc aagaagggcg tgtgcgtgca
    14581 ggtcaaacta ttgttgaagc gactgctggt aatacaggca tagggttagc tattgcagcg
    14641 aatagacatc atttgaaatg taagatcttt gcgccgtatg gtttttcaga agaaaagatt
    14701 aatattatga tagcgcttgg tgcagaagtt tcaaggacga gtcagtctga aggtatgcat
    14761 ggggcacaat tagctgcacg ttcctatgct gaaaaatatg gtgccgttta tatgaatcaa
    14821 tttgaatccg aacataatcc ggatacatat tttcatacat tgggacccga attgacttca
    14881 gcattacagc aaattgatta ttttgtggct ggtattggct ctggcggtac atttacaggt
    14941 accgcacgtt atttaaagca acatcacgtg caatgttatg ccgttgagcc agaagggtcc
    15001 gtgttaaatg gagggccagc tcatgcacat gacactgaag gtatcggttc tgagaaatgg
    15061 ccgatatttt tagagagacg tcttgtagat gggatattta cgattaaaga tcaagatgcc
    15121 tttcgaaatg tcaaaagttt ggctataaat gaagggttgt tagtaggcag ttcttcaggt
    15181 gcagcattac aaggtgcatt gaatttaaaa gcgcaattat ctgaaggtac gattgttgtc
    15241 gtatttccag atggtagtga tcgatatatg tctaagcaaa tatttaatta tgaggagaat
    15301 aataatgaac aagaaaacta aattaattca tggtgggcac acaacagacg attatacagg
    15361 tgccgttaca acaccaattt atcaaacaag tacatattta caagatgata ttggtgattt
    15421 acgtcaagga tatgaatatt ctcgtactgc gaatccaaca agaagttctg tagaaagcgt
    15481 tattgcgaca ttagaaaatg gcaaacatgg ctttgcattt agttcaggtg ttgcagcaat
    15541 cagtgcagtt gttatgctgt tggacaaagg agatcatatt attttaaatt cagatgtata
    15601 cggcggtact tatcgcgcat tgacaaaagt atttacacga tttggcattg aagtggattt
    15661 tgtagataca acgcatacag attcaattgt acaagcgata cgcccaacaa caaagatgtt
    15721 gtttattgaa acaccttcta atccattatt acgtgttact gacattaaaa agtctgctga
    15781 aattgcgaaa gaacacggtt tgatttcagt tgttgataac acatttatga caccttatta
    15841 tcagaatcca ttagatttag gtatcgatat tgtcttacat tctgcaacga aatatttagg
    15901 tggacatagt gatgtcgttg ctggtttagt tgcaacatcg gatgacaagc ttgcagaacg
    15961 tttagcattt atttcaaatt caacaggtgg cattttagga cctcaagata gctatttact
    16021 tgtgaggggt attaaaacat taggtttacg tatggaacaa attaatcgca gcgttattga
    16081 aattattaaa atgttacaag cacatccagc tgtgcaacaa gtgttccatc caagtattga
    16141 aagtcattta aatcatgatg tccatatggc tcaagcggat ggccatacag gtgtgattgc
    16201 atttgaagtg aaaaatacag aaagtgccaa acaattgatt aaagcaacat cgtattacac
    16261 attagctgaa agtttaggtg cagtggaaag tttaatttca gtacctgcat tgatgacaca
    16321 tgcatccatt ccagcagata ttcgagctaa agaaggtatt acagacggac ttgtaagaat
    16381 ttctgtaggt attgaagata ctgaagattt agtcgatgat ttaaaacaag cactagatac
    16441 tttataaata atagcagcac tggcatatat tttgagttca acgtttgttg ttcttgaata
    16501 tgctagtgct tttttgtgcg atgttaatat ttagtaattg cgttgtggag gattggtgga
    16561 catttttatg gatttaattt gataaatgtc atagtagtct cacaattcgt cattgtcaca
    16621 tgaattactt attttttaat tttttagaaa attcggcaaa ttgtattgac gatatatgca
    16681 attttacata taatgctctt attcctagtg gattaataag aatttgtagg aggggcgatg
    16741 atgattgagt ttcgacaggt aagtaagacc tttaataaaa agaagcaaaa aatagatgct
    16801 ttgaaggacg tatcatttac ggtcaatcgc aatgatattt ttggtgtgat tggatatagt
    16861 ggtgcaggaa aaagtacgtt ggtaagactc gtgaatcatc ttgaagctgc ctcgaatgga
    16921 caagtgattg tagatggaca tgatattacg aattatagcg ataaaatgat gagggatatt
    16981 aagaaagata tcggtatgat atttcagcat ttcaatttat taaattcagc taccgtattt
    17041 aaaaatgtag caatgccact cattttaagt aagaaaagca aaacagaaat taagcaacga
    17101 gtaacggaaa tgcttgaatt tgtaggattg agtgataaaa aagaccaatt tcctgatgaa
    17161 ttatctggtg ggcagaagca aagggtggct attgcaagag cgcttgttac taatccgaaa
    17221 atactcctat gcgatgaagc aacaagcgca ttggatccag caacgactgc ttcgatattg
    17281 acgttattaa agaatgtcaa tcaaaccttt ggcattacaa ttatgatgat tacacatgaa
    17341 atgcgcgtta ttaaagacat ttgtaatcgt gttgctgtaa tggaaaaggg gaaagtggtt
    17401 gaaacaggaa ctgttaaaga ggtgtttagt catcctaaaa cgacgattgc tcaaaatttt
    17461 gtgtctacag ttatacagac tgagccaagt acatcattga ttcgtcgatt gaatgacgaa
    17521 caagttggcg attttaaaga ttataaaatc ttcgtcgagg aaactcaggt gacacaaccg
    17581 attataaatg acttgattca aatttgtggc agagaggtta aaattttatt ttcatctatg
    17641 tcagaaatac aaggtaacac cgtatgttat atgtggcttc gatttaatat ggatcaacaa
    17701 tttgaagaca cggcaataaa tcaatatttc aaagagaaaa atattcaatt tgaggaggtg
    17761 cattaacata tgtttggttc tgatttagac agtgcacagt tattacaagc attgtacgaa
    17821 acgctatata tggtatctat tgctttattt ttaggagcag tgattggtat tccattaggt
    17881 gtcttattgg taattactcg aaaacaaggc atatggccca atatagtgat acatcaagtt
    17941 ttaaatcctt taatcaatat tttaaggtca ctaccattta ttattttgtt aattgcgatt
    18001 gtgccattca caaaattagt agtaggtact tcaattggta cgactgctgc catcgtgcct
    18061 ttaacagtat atgtggcacc ttacattgca agacttgttg aaaactcatt attggaagta
    18121 gacgagggga ttattgaagc ggcgaaagcg atgggcgctt caccactaca aatcattaga
    18181 tattttttaa ttcctgaagc tttaggttcg ttagtattag caattaccac tgcgattatt
    18241 ggacttattg gaagtacggc gatggcagga gctgttggcg gtggtggtat aggagactta
    18301 gctttagtgt atggttatca aagatttgat acgacggtca ttattattac cgttattgta
    18361 ttagtcatta ttgtccaagt gattcaaacg ctagggaatg ttctagctag attcatacgt
    18421 agacattaat gatatatagt gaagattttg aaaggaattg atagaatgaa aagattgatt
    18481 gggttagtta tcgtagcact tgtattatta gcagcgtgtg gtggtaacaa tgataaaaaa
    18541 gtaacaattg gtgtcgcatc aaatgacact aaggcttggg agaaggttaa agaattagct
    18601 aaaaaagatg atattgatgt ggagattaag cacttctcag attacaattt accgaataaa
    18661 gcattaaatg atggtgatat tgatatgaat gcattccaac attttgcatt tttagatcaa
    18721 tataaaaagg cgcataaagg aacaaagatt tcagcattaa gtacaacagt tttagcaccg
    18781 ttgggcattt actcagataa aattaaagat gtcaaaaagg ttaaagatgg tgctaaagtt
    18841 gtcattccaa atgatgtgtc aaaccaagca cgtgcactta aactattaga agcagctggt
    18901 ttaataaaac tgaaaaaaga tttcggatta gcaggcacgg tgaaagatat aacgtcaaat
    18961 ccaaaacatt taaaaattac tgcagtagat gcacaacaaa ctgcacgtgc tttatctgat
    19021 gtcgatattg cagttattaa taacggtgta gcaactaaag cgggtaaaga tcctaaaaat
    19081 gatccgatat ttttagaaaa atcaaattca gatgcagtaa agccatatat taatattgtt
    19141 gcagttaatg acaaagactt ggataacaaa acatatgcta aaatcgtaga attgtatcat
    19201 tcaaaagaag ctcaaaaagc gttgcaggaa gatgtcaaag atggagagaa acctgttaat
    19261 ttatctaaag atgagattaa ggcaatagaa acgtcattag caaaataaat tatattgcgt
    19321 cctacaagca aagttcatgc ttatgtttgt agggcgttat tgttggagaa taaaattatt
    19381 tccaatagag aaagggattg taatcatttt atagtgaaat attatgaaat tgtaataatt
    19441 tagatattgt aaaatctaat aagttgtaat aattttaagg ggtaattata aaatttgatg
    19501 atacagtata tgattttttt gtaatcataa tgtcatcaaa catcaaccta ttatacataa
    19561 taaaatcgta taatgatgta gtattcataa attcggataa aagaatgtta ggaaagttaa
    19621 gcaagaggag gattttaaag tgcaaaaaaa agtaattgca gctattattg ggacaagcgc
    19681 gattagcgct gttgcggcaa ctcaagcaaa tgcggctaca actcacacag taaaaccggg
    19741 tgaatcagtg tgggcaattt caaataagta tgggatttcg attgctaaat taaagtcatt
    19801 aaacaattta acatctaatc taattttccc aaaccaagta ctaaaagtat ctggctcaag
    19861 taattctacg agtaatagta gccgtccatc aacgaactca ggtggcggat catactacac
    19921 agtacaagca ggcgactcat tatcattaat cgcatcaaaa tatggtacaa cttaccaaaa
    19981 cattatgcga cttaatggtt taaataattt ctttatttat ccaggtcaaa aattaaaagt
    20041 atcaggtact gctagctcaa gtaacgctgc gagcaatagt agccgtccat caacgaactc
    20101 aggtggcgga tcatactata cagtacaagc aggtgactca ttgtcattaa ttgcatcaaa
    20161 atatggtaca acttatcaaa aaattatgag cttaaatggc ttaaataatt tctttatata
    20221 tccgggtcaa aaattgaaag taactggtaa tgcatctacg aactcaggat ctgcaacaac
    20281 gacaaataga ggttacaata caccagtatt cagtcaccaa aacttatata catggggtca
    20341 atgtacatat catgtattta atcgtcgtgc tgaaattggt aaaggtatta gtacttattg
    20401 gtggaatgct aataactggg ataacgcagc ggcagcagat ggttacacta tcgacaatag
    20461 acctactgta ggttctatcg ctcaaacaga tgtaggttac tatggtcatg ttatgtttgt
    20521 agaacgtgta aataacgatg gtagtatttt agtttcagaa atgaactatt cagctgcacc
    20581 aggtatttta acttacagaa cggtaccagc ttaccaagta aataattata gatatattca
    20641 ctaaagtctt acgtatataa atatataatg aattcctatt acatttcaca agctgaaaag
    20701 ttggattgaa tcctaaattt tatggcgggg ctatcaaagt cgtgattgtt gtaataggaa
    20761 tttttgtata tgaaaaagga ttggtcgaat gaacttcatg ttctatgttc gaccaatcct
    20821 tttctgaatt agtattcatg ttttactttg cgaatgcttg taaataatct agcaccgttt
    20881 gttattaaag taacaactgc cactgctttt ttgaacttac gtggtgactt aattgaaatg
    20941 taaaagtcta acacggttcc tacagtgctt aaacctaatg aaagatatac taatttttta
    21001 tttttagcat gatatttata gccattgtag ccgtcgacta tgaaacctgc gacatttagt
    21061 aaacttgata aacgttgtga tttggaacgt tttgccataa taataattcc ccctagtatc
    21121 ttctgtttat atgaaaagtt gggtgcgctg aattgctaac gttttgcgct ataactactc
    21181 atatatgata acataattgt acagtataat ttgaaaaatt gatttcacaa agttggggtg
    21241 tcaaagatga ttaaatgtgt ctgtttagtt gaagaaacag ctgataaaat attgcttgtt
    21301 caagtaagga atcgcgaaaa gtattatttc ccgggtggta aaatagaaga aggggaatca
    21361 caagtacacg cgctgttaag agaagtaaaa gaagaattaa atttaacatt aacaatggat
    21421 gaaattgaat atgtcgggac aattgtaggt cctgcatatc cacaacagga tatgttaact
    21481 gagttaaatg gatttcgcgc attaaccaaa atcgattggg aaaacgtaac tatcaataat
    21541 gaaattacgg atatacgctg gattgataaa gataatgatg cgttgattgc gcctgctgtc
    21601 aaagtttgga ttgaaactta tggtggtaaa catgacaaat aatgacacca tcatgttacg
    21661 acattatgtc ccacaagatt attcgatgtt agaagctttt caattaagtg aaagtgattt
    21721 gaagtttgtt aaaacgccag aggaaaatat tacagctgca atgtctgata atgaaaggta
    21781 tcccatcgtt gtaatggatg gcaggcaatg tgtggccttt tttacattac atcgtggaaa
    21841 aggggtcgca ccatttagcg ataaccaaga tgcagtattt ttcaggtcat ttagtgttga
    21901 tcaacgttat cgtaatagag gaataggtaa agtggtaatg gaaaaattgg cgtcatttat
    21961 cacttcaaca tttcaggata ttaatgagat tgtgttaacg gttaatactg acaatccaca
    22021 tgccatggca ctttatcgcc aacaaggata tcaatatatg ggagatagta tgttcgtcgg
    22081 aagacctgtt catattatgg cgttaactat aaaataaatt aaatttaaaa gcatctttac
    22141 tcatcgtcga ccacaacaat taatgatgaa taaaggtgct ttttgttata gatcatcgga
    22201 caatttacta tagtaaaaag cgacctagtg aacaattgac atatatccac aggtcgctta
    22261 acttaagtta tattgctagt tgcgattaat tgatagactc atcatttttg cgctgtcgag
    22321 atggtctttt tattaaaaat gccgtaatcc aagccgtaat cggaatactg attgcaacgg
    22381 caataccgcc taaaataata gaaataaatt cttgggcaaa tattttcgag tttataatat
    22441 gaccaaatga atatttaagt ttgaaaaacc aaataaataa agcaagttgg ccaccaaaaa
    22501 aggcaaggta aatcgtgttc gcagatgtcg ctaaaatttc tctaccaaca cgcatgccag
    22561 attggaataa ttcgtattgc gtaagcgttg gattcacttg atgcaattca taaatgggtg
    22621 aactaatggt aattgttaaa tctatcacag ctgcaataac agcaagaata atagtgaaca
    22681 ccataaattg aaccatatca atgccaatat tcattgaata cacatatgtt tcatcttgtt
    22741 gttcggttga aaagccttgt agatgaccga agtagaccga taaataaatg agtgtaatca
    22801 acaatattgt tgtaacgata gtgctgataa atgcagcttg tgttttaaca ttgtaactat
    22861 tgagtacgaa taaattacaa gcgccaataa taatgcagaa aaagaatgtg acgacataaa
    22921 tcggtacgcc aaaaataatc aatacaatac taataattaa aatagcgaaa tttaaaaata
    22981 gggttaaata agagatgaat ccctttttac ctccgaaaat tatcatcaga aagaggagca
    23041 ataacgccaa tataaataca gcattcattg tttcgccctc cttaatgttt caaatatttc
    23101 cataaacaat attgtgatag gaattgtaag tacgatacct ataccacctg ttagtgcgcg
    23161 cgcaatttct aacgaccaat tcatcgaaat agtataagtc actgtattgg cattttttaa
    23221 aaagattaaa aacataggta gtgcaccgga taaatatgag aataataaga tgttagtcat
    23281 tgttcccata atatcttggc cgatgtttcg cccagcaagc gcccatctcc tcattgaaat
    23341 gtgtggcgta cgctgtaaaa tttcatgcat accactagca attgtaattg caacatccat
    23401 aatagcgcca agtgaaccta ttaacactga ggctaggaag atatctttcg gtggtaatga
    23461 taaaaagttc atcgtttcat atttaatgcc tttaccatct gtcatatata tgattaattc
    23521 tgttaaacct atactcaaaa aagttccgat aattgtactg gctatggtaa tgagtgtacg
    23581 catatgccag cctgtaacga gcaataaagt gagtattgtt gaacagatca tggcaatggt
    23641 catgagtaag aataaattaa tattgctatg ttgaatatga atgtaaattg cgattaatat
    23701 ggcaatagaa ttcaagatta acgataaaat cgattgcagt ccgactttgc gaccaaccaa
    23761 taatacagtt aataagaaca aaccagtgat gataaccgtt aaggtatcac gcttcttttc
    23821 tataatataa gcatcactcg gcttgttaga aatatgtaat aatacttttt cgtgtgtgcg
    23881 aaatgcctca gaatctgctt gcgatttgac gtactgatga ttaatcgtcg tcgtttctcc
    23941 agcaaattga ccatttaata ttttgacttt taattgattt ttatatttaa tatcacgatt
    24001 attttgtgca tcttttgtag gtgtcgaaga aacatgtttg acatctataa tttgaccaat
    24061 tggtttgttg taaaagttct cattattgaa tgtaaataaa atagcaccaa tgaatgcgat
    24121 gcagaacaaa cctaaaatta tat
//
LOCUS       DALPQQ010000024        23582 bp    DNA     linear   BCT 22-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus strain K18-6-464
            SAMD00233528-rid16434743.denovo.024, whole genome shotgun sequence.
ACCESSION   DALPQQ010000024 DALPQQ010000000
VERSION     DALPQQ010000024.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMD00233528
            Sequence Read Archive: DRR236061
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 23582)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 23582)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001543423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001543423.1
            Genome Coverage       :: 77x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/22/2022 17:09:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,811
            CDSs (total)                      :: 2,743
            Genes (coding)                    :: 2,689
            CDSs (with protein)               :: 2,689
            Genes (RNA)                       :: 68
            rRNAs                             :: 2, 4, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 4, 2 (16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 54
            CDSs (without protein)            :: 54
            Pseudo Genes (ambiguous residues) :: 0 of 54
            Pseudo Genes (frameshifted)       :: 27 of 54
            Pseudo Genes (incomplete)         :: 27 of 54
            Pseudo Genes (internal stop)      :: 10 of 54
            Pseudo Genes (multiple problems)  :: 10 of 54
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..23582
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMD00233528-rid16434743.denovo.024"
                     /strain="K18-6-464"
                     /db_xref="taxon:1280"
                     /geo_loc_name="Japan: Niigata"
     gene            81..1562
                     /locus_tag="O7798_000876"
     CDS             81..1562
                     /locus_tag="O7798_000876"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000719177.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HDC2863145.1"
                     /translation="MKKIFMMVHELDVNKGGMTSSMFNRSKEFYDADIPADIVTFDYK
                     GNYDEIIKALKKQGKMDRRTKMYNVFEYFKQISNNKHFKSNKLLYKHISERLKNTIEI
                     EESKGISRYFDITTGTYIAYIRKSKSEKVIDFFKDNKRIERFSFIDNKVHMKETFNVD
                     NKVCYQVFYDEKGYPYISRNINANNGAVGKTYVLVNKKEFKNNLALCVYYLEKLIKDS
                     KDSIMICDGPGSFPKMFNTNHKNAQKYGVIHVNHHENFDDTGAFKKSEKYIIENANKI
                     NGVIVLTEAQRLDILNQFDVENIFTISNFVKIHNAPKHFQTEKIVGHISRMVPTKRID
                     LLIEVAELVVKKDNAVKFHIYGEGSVKDKIAKMIEDKNLERNVFLKGYTTTPQKCLED
                     FKLVVSTSQYEGQGLSMIEAMISKRPVVAFDIKYGPSDFIEDNKNGYLIENHNINDMA
                     DKILQLVNNDVLAAEFGSKARENIIEKYSTESILEKWLNLFNS"
     gene            complement(1651..2007)
                     /locus_tag="O7798_000877"
     CDS             complement(1651..2007)
                     /locus_tag="O7798_000877"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499528.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DoxX family protein"
                     /protein_id="HDC2863146.1"
                     /translation="MKLGMLLIRWMLATSFLVHGTLKFVDLDGTIHFLGSLGLPPTIA
                     VLMSIGEVVGGLALIIGFLTPYVNVFYICVMLGSIFTLKLTRGYVSGYEFEIIHIVMN
                     LACISSYSWKKWLQFY"
     gene            2495..3454
                     /locus_tag="O7798_000878"
     CDS             2495..3454
                     /locus_tag="O7798_000878"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001081330.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HDC2863147.1"
                     /translation="MNRNIVKLVVFMLILVVAVAGCGQKDTEEKTEMTTIKDELGTEK
                     IKKNPKRVVVLEYSFADYLAALDMKPVGIADDGSTKNITKSVRDKIGAYESVGSRPQP
                     NMEVISKLKPDLIIADVSRHKKIKSELSKIAPTIMLVSGTGDYNANIEAFKTVAKAVG
                     KEKEGEKRLEKHDKILAEIRKKIEQSTLKSAFAFGISRAGMFINNEDTFMGQFLIKMG
                     IQPEVTKDKTTHVGERKGGPYIYLNNEELANINPKVMFLATDGKTDKNRTKFIDPAVW
                     KSLKAVKDNKVYDVDRNKWLKSRGIIASESMAEDLEKIAEKAK"
     gene            complement(3500..3631)
                     /locus_tag="O7798_000879"
     CDS             complement(3500..3631)
                     /locus_tag="O7798_000879"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499530.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDC2863148.1"
                     /translation="MRYVTMRQFIKRTVKTILVGYVIKFIRNKLSGKSSHPTDNKHN"
     gene            complement(3695..3910)
                     /locus_tag="O7798_000880"
     CDS             complement(3695..3910)
                     /locus_tag="O7798_000880"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000867358.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TM2 domain-containing protein"
                     /protein_id="HDC2863149.1"
                     /translation="MKVNKAIYVIVALFLGGLGIHKFYADKFGQGLFHLLFFWTGIPT
                     IISIIHAIFVIFTKKADKDGYIIFPKN"
     gene            4075..4626
                     /locus_tag="O7798_000881"
     CDS             4075..4626
                     /locus_tag="O7798_000881"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499532.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HDC2863150.1"
                     /translation="MIRQARPEDRFDIAKLVYMVWDDMELELVKHLPKDMVLDAIEKS
                     CVDATYRTFYQHILVYEVENKVAGCIISYSGENELKYEKAWELLDLPEKIKQYGTPLP
                     VKEAKDDEYYIETIATFAAYRGRGIATKLLTSLLESNTHVKWSLNCDINNEAALKLYK
                     KVGFISDGQIELYKHMYHHLIVK"
     gene            complement(4678..5616)
                     /locus_tag="O7798_000882"
     CDS             complement(4678..5616)
                     /locus_tag="O7798_000882"
                     /EC_number="2.5.1.74"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499533.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="1,4-dihydroxy-2-naphthoate
                     polyprenyltransferase"
                     /protein_id="HDC2863151.1"
                     /translation="MSNQYQQYSTVKKYWHLMRPHTLTASVVPVLVGTAASKIYFLGS
                     EDHIKISLFIAMLLACLLIQAATNMFNEYYDYKKGLDDHESVGIGGAIVRNGMSPELV
                     LRLAIAFYILAAILGLFLAANSSFWLLPVGLVCMAVGYLYTGGPFPISWTPFGELFSG
                     VFMGMFIIVIAFFIQTGNIQSYVIWLSVPIVITIGLINMANNIRDRVKDKASGRKTLP
                     ILLGKNASLTFMAIMYFIAYAFIVLTIIIKPGGSLFYLLALLSFPMPVKVIRRFKKND
                     TPPTMMPAMAAAGKTNTFFGLLYALGIYISALFAGI"
     gene            5798..7159
                     /locus_tag="O7798_000883"
     CDS             5798..7159
                     /locus_tag="O7798_000883"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000190617.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="isochorismate synthase MenF"
                     /protein_id="HDC2863152.1"
                     /translation="MATGVLEDDIVKEIYGSSKEWVSVEVKLSQSLDPSTLFHLTDNE
                     AGDRFYMRLNDNRTSYFGYKAIQLFKNNSKNKQSIFKDWEKLKHNITFIHPQSEKHHL
                     RVVGGFQFSSHKSDDEWREFGLNHFVLPEVLISTDNNGTFLTYTVKRESFTVEALNDL
                     MDLFNNISDIDVDEQIGEITRNEDIYKDDWRQLVVEAIESINNEEKIVLARRRLIKFD
                     KDISIPYILKQAYSKEKNSYIFLLESQDSIFFSQTPEQLIKVNNKILSTKAVAGTIKR
                     SQDEDEDTKNVEAFLKDNKNLIEHRFVVDSILHDIKPYITELHYDKTPKILKNDHLYH
                     LYTEIKAPLKDDSYISLIDNLHPTPALGGYPKEFAMDFIEQKEFGTRGLYGAPVGYID
                     IYDDCEFIVAIRSMLIKKAQATLFAGCGIVKDSDPDSELAETNLKFTPMMNALGVDMN
                     GKS"
     gene            7146..8819
                     /gene="menD"
                     /locus_tag="O7798_000884"
     CDS             7146..8819
                     /gene="menD"
                     /locus_tag="O7798_000884"
                     /EC_number="2.2.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499536.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-succinyl-5-enolpyruvyl-6-hydroxy-3-
                     cyclohexene-1-carboxylic-acid synthase"
                     /protein_id="HDC2863153.1"
                     /translation="MGNHKAALTKQVFTFASELYAYGVREVVISPGSRSTPLALAFEA
                     HPNIKTWIHPDERSAAFFAVGLIKGSERPVAILCTSGTAAANYTPAIAESQISRIPLI
                     VLTSDRPHELRSVGAPQAINQVNMFNNYVSYEFDMPIADDSKETIDAIYYQMQIASQY
                     LYGPHKGPIHFNLPFRDPLTPDLNATELLTSEMKILPHYQKSIDASALRHILNKKKGL
                     IIVGDMQHQEVDQILTYSTIYDLPILADPLSHLRKFDHPNVICTYDLLFRSGLDLNVD
                     FVIRVGKPVISKKLNQWLKKTDAFQILVQNNDKIDVFPIAPDISYEISANDFFRSLME
                     DTTVNRVSWLEKWQCLEKKGRKEIKCYLEQATDESAFVGELIKKTSEKDALFISNSMP
                     IRDVDNLLLNKNIDVYANRGANGIDGIASTALGMAVHKRITLLIGDLSFYHDMNGLLM
                     SKLNNIQMNIVLLNNDGGGIFSYLPQKESATDYFERLFGTPTGLDFEYTAKLYQFDFK
                     RFNSVSEFKNATLLSETSTIYELITNREDNFKQHQILYQKLSEMIHDTL"
     gene            8806..9609
                     /gene="menH"
                     /locus_tag="O7798_000885"
     CDS             8806..9609
                     /gene="menH"
                     /locus_tag="O7798_000885"
                     /EC_number="4.2.99.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499537.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-succinyl-6-hydroxy-2,
                     4-cyclohexadiene-1-carboxylate synthase"
                     /protein_id="HDC2863154.1"
                     /translation="MTHYKFYEANVETNQVLVFLHGFLSDSRTYHNHIEKFTDNYHVI
                     TIDLPGHGEDQSSMDETWNFDYITTLLDRILDKYKDKSITLFGYSMGGRVALYYAING
                     HIPISNLILESTSPGIKEEANQLERRLVDDARAKVLDIAGIELFVNDWEKLPLFQSQL
                     ELPVEIQHQIRQQRLSQSPHKMAKALRDYGTGQMPNLWPRLKEIKVPTLILAGEYDEK
                     FVQIAKKMANLIPNSKCKLISATGHTIHVEDSDEFDTMILGFLKEEQND"
     gene            9602..10423
                     /gene="menB"
                     /locus_tag="O7798_000886"
     CDS             9602..10423
                     /gene="menB"
                     /locus_tag="O7798_000886"
                     /EC_number="4.1.3.36"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499538.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="1,4-dihydroxy-2-naphthoyl-CoA synthase"
                     /protein_id="HDC2863155.1"
                     /translation="MTNRQWETLREYDEIKYEFYEGIAKVTINRPEVRNAFTPKTVAE
                     MIDAFSRARDDQNVSVIVLTGEGDLAFCSGGDQKKRGHGGYVGEDQIPRLNVLDLQRL
                     IRIIPKPVIAMVKGYAVGGGNVLNVVCDLTIAADNAIFGQTGPKVGSFDAGYGSGYLA
                     RIVGHKKAREIWYLCRQYNAQEALDMGLVNTVVPLEKVEDETVQWCKEIMKHSPTALR
                     FLKAAMNADTDGLAGLQQMAGDATLLYYTTDEAKEGRDAFKEKRDPDFDQFPKFP"
     gene            complement(10662..10991)
                     /gene="sspC"
                     /locus_tag="O7798_000887"
     CDS             complement(10662..10991)
                     /gene="sspC"
                     /locus_tag="O7798_000887"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499539.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="staphostatin B"
                     /protein_id="HDC2863156.1"
                     /translation="MYQLQFINLVYDTTKLTHLEQTNINLFIGNWSNHQLQKSICIRH
                     GDDTSHNQYHILFIDTAHQRIKFSSIDNEEIIYILDYDDTQHILMQTSSKQGIGTSRP
                     IVYERLV"
     gene            complement(11029..12210)
                     /gene="sspB"
                     /locus_tag="O7798_000888"
     CDS             complement(11029..12210)
                     /gene="sspB"
                     /locus_tag="O7798_000888"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499540.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine protease staphopain B"
                     /protein_id="HDC2863157.1"
                     /translation="MNSSCKSRVFNIISIIMVSMLILSLGAFANNNKAKADSHSKQLE
                     INVKSDKVPQKVKDLAQQQFAGYAKALDKQSNAKTGKYELGEAFKIYKFNGEEDNSYY
                     YPVIKDGKIVYTLTLSPKNKDDLNKSKEDMNYSVKISNFIAKDLDQIKDKNSNITVLT
                     DEKGFYFEEDGKVRLVKATPLPGNVKEKESAKTVSAKLKQELKNTVTPTKVEENEAIQ
                     EDQVQYENTLKNFKIREQQFDNSWCAGFSMAALLNATKNTDTYNAHDIMRTLYPEVSE
                     QDLPNCATFPNQMIEYGKSQGRDIHYQEGVPSYEQVDQLTKDNVGIMILAQSVSQNPN
                     DPHLGHALAVVGNAKINDQEKLIYWNPWDTELSIQDADSSLLHLSFNRDYNWYGSMIG
                     Y"
     gene            complement(12292..13302)
                     /gene="sspA"
                     /locus_tag="O7798_000889"
     CDS             complement(12292..13302)
                     /gene="sspA"
                     /locus_tag="O7798_000889"
                     /EC_number="3.4.21.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499541.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Glu-specific serine endopeptidase SspA"
                     /protein_id="HDC2863158.1"
                     /translation="MKGKFLKVSSLFVATLTTATLVSSPAANALSSKAMDNHPQQTQS
                     SKQQTPKIQKGGNLKPLEQREHANVILPNNDRHQITDTTNGHYAPVTYIQVEAPTGTF
                     IASGVVVGKDTLLTNKHVVDATHGDPHALKAFPSAINQDNYPNGGFTAEQITKYSGEG
                     DLAIVKFSPNEQNKHIGEVVKPATMSNNAETQVNQNITVTGYPGDKPVATMWESKGKI
                     TYLKGEAMQYDLSTTGGNSGSPVFNEKNEVIGIHWGGVPNEFNGAVFINENVRNFLKQ
                     NIEDIHFANDDQPNNPDNPDNPNNPDNPNNPDEPNNPDNPNNPDNPDNGDNNNSDNPD
                     AA"
     gene            complement(13831..14985)
                     /locus_tag="O7798_000890"
     CDS             complement(13831..14985)
                     /locus_tag="O7798_000890"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499542.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class I/II-fold pyridoxal
                     phosphate-dependent enzyme"
                     /protein_id="HDC2863159.1"
                     /translation="MKLSLNSNSKYLRAPSIRQFSNRMNNLDDCVNLTIGQPDFPMPD
                     VVKKAYIDAINNDKTSYSHNKGLLETREAISQYFKNRYHFSYDPEEIIVTNGASEAID
                     TTLRSIIEPGDEIIIPGPIYAGYIPLIEVLGGKPIYIDTTATQFKITPDALESHISPK
                     TKAVLLNYPTNPTGVVLKRNEVLNIVNVLKKYPLFIISDEIYAENTFSGKHVSFAEFE
                     DIRDQLILIGGLSKSHSATGIRIGFLLGPQYLIDKLTFMHAYNCICANVPAQIACITA
                     LNEGLEAPKYMNEAYVERRNYLVSELTKLGFEITAQPEGAFYIFPSIKHITDDDFEFC
                     VDLLESTHLAIVPGSSFTEFGKGFVRISYAYEMDVLKEGMKRLAKYLNTK"
     gene            complement(15181..16191)
                     /locus_tag="O7798_000891"
     CDS             complement(15181..16191)
                     /locus_tag="O7798_000891"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499543.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyltransferase family protein"
                     /protein_id="HDC2863160.1"
                     /translation="MTSLKERDYFFDNARAILILLVVFGHMLQPYTSGDKYLSALYLV
                     IYSFHMPTFLFISGYFAKNIDKPYYLEKISKRLIVPYMIFFAFFSIYYFLTGKSDELQ
                     LDPFNPVFALWFLITLFFFHVILVIVRRFNPYKVLSVSIIISIGAGFSDNIDSYLSIS
                     RTIVFFPIFYLGYIFTKKHTAIFKNKKLIPVSIITFILFFIVYVIHPINADWLLGSSP
                     YTSLENEGQSIFSPFKRLILYGIILIAMTAFLNLMSTKKKLYTYIGSRTLYVYLLHGL
                     IIGIVRGFEWYPFDNPISLMTYLYLISISVIIVYVLSTNFVCKWTNPIINLQRPSQFK
                     DS"
     gene            16344..16763
                     /locus_tag="O7798_000892"
     CDS             16344..16763
                     /locus_tag="O7798_000892"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499544.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MarR family transcriptional regulator"
                     /protein_id="HDC2863161.1"
                     /translation="MYKQLEKLITLTNNDLNLVNRRFGQRTDITSEQLELLRILFNYD
                     RLSQYDLTMKISREQSIVSRWIKKLVLKGYITSQQSSEDLRCKELILTDQARTLISQI
                     NNARCELIEARCQCLSEVELDNLNQLLDKLNQRRISL"
     gene            16790..16900
                     /locus_tag="O7798_000893"
     CDS             16790..16900
                     /locus_tag="O7798_000893"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499545.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDC2863162.1"
                     /translation="MSLCTQQKLNHELQAKVAVIVKIDGKQSPLFLLVYV"
     gene            complement(16970..20740)
                     /locus_tag="O7798_000894"
     CDS             complement(16970..20740)
                     /locus_tag="O7798_000894"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499546.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucosaminidase domain-containing protein"
                     /protein_id="HDC2863163.1"
                     /translation="MAKKFNYKLPSMVALTLVGSAVTAHQVQAAETTQDQTTNKNVLD
                     SNKVKATTEQAKAEVKNPTQNISGTQVYQDPAIVQPKTANNKTGNAQVSQKVDTAQVN
                     GDTRANQSATTNNTQPVAKSTSTTAPKTNTNVTNAGYSLVDDEDDNSENQINPELIKS
                     AAKPAALETQYKTAAPKAATTSAPKAKTEATPKVTTFSASAQPRSVAATPKTSLPKYK
                     PQVNSSINDYIRKNNLKAPKIEEDYTSYFPKYAYRNGVGRPEGIVVHDTANDRSTING
                     EISYMKNNYQNAFVHAFVDGDRIIETAPTDYLSWGVGAVGNPRFINVEIVHTHDYASF
                     ARSMNNYADYAATQLQYYGLKPDSAEYDGNGTVWTHYAVSKYLGGTDHADPHGYLRSH
                     NYSYDQLYDLINEKYLIKMGKVAPWGTQSTTTPTTPSKPTTPSKPSTGKLTVAANNGV
                     AQIKPTNSGLYTTVYDKTGKATNEVQKTFAVSKTATLGNQKFYLVQDYNSGNKFGWVK
                     EGDVVYNTAKSPVNVNQSYSIKPGTKLYTVPWGTSKQVAGSVSGSGNQTFKASKQQQI
                     DKSIYLYGSVNGKSGWVSKAYLVDTAKPTPTPTPKPSTPTTNNKLTVSSLNGVAQINA
                     KNNGLFTTVYDKTGKPTKEVQKTFAVTKEASLGGNKFYLVKDYNSPTLIGWVKQGDVI
                     YNNAKSPVNVMQTYTVKPGTKLYSVPWGTYKQEAGAVSGTGNQTFKATKQQQIDKSIY
                     LFGTVNGKSGWVSKAYLAVPAAPKKAVAQPKTAVKAYTVTKPQTTQTVSKIAQVKPNN
                     TGIRASVYEKTAKNGAKYADRTFYVTKERAHGNETYVLLNNTSHNIPLGWFNVKDLNV
                     QNLGKEVKTTQKYTVNKSNNGLSMVPWGTKNQVILTGNNIAQGTFNATKQVSVGKDVY
                     LYGTINNRTGWVNAKDLTAPTAVKPTTSAAKDYNYTYVIKNGNGYYYVTPNSDTAKYS
                     LKAFNEQPFAVVKEQVINGQTWYYGKLSNGKLAWIKSTDLAKELIKYNQTGMTLNQVA
                     QIQAGLQYKPQVQRVPGKWTDANFNDVKHAMDTKRLAQDPALKYQFLRLDQPQNISID
                     KINQFLKGKGVLENQGAAFNKAAQMYGINEVYLISHALLETGNGTSQLAKGADVVNNK
                     VVTNSNTKYHNVFGIAAYDNDPLREGIKYAKQAGWDTVSKAIVGGAKFIGNSYVKAGQ
                     NTLYKMRWNPAHPGTHQYATDVDWANINAKIIKGYYDKIGEVGKYFDIPQYK"
     gene            complement(20968..21402)
                     /locus_tag="O7798_000895"
     CDS             complement(20968..21402)
                     /locus_tag="O7798_000895"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499547.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HDC2863164.1"
                     /translation="MFSKVNNQKMLEDCFYIRKKVFVEEQGVPEESEIDEYESESIHL
                     IGYDNGQPVATARIRPINETTVKIERVAVMKSHRGQGMGRMLMQAVESLAKDEGFYVA
                     TMNAQCHAIPFYESLNFKMRGNIFLEEGIEHIEMTKKLTSLN"
     gene            complement(21557..22027)
                     /locus_tag="O7798_000896"
     CDS             complement(21557..22027)
                     /locus_tag="O7798_000896"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499548.1"
                     /note="Essential protein for resistance to osmotic stress
                     from salt; Derived by automated computational analysis
                     using gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="osmotic stress response protein"
                     /protein_id="HDC2863165.1"
                     /translation="MSRKTYEKIANINGMFNMLEQQIIHSQDMAHFRSEFFYVNHEHR
                     ENYEALLIYYKNSIDNPIVDGACYILALPEIFNSVDVFESELPFSWVYDENGITETMK
                     SLSIPLQYLVAAALEVTDVNIFKPSGFTMGMNNWNIAQMRIFWQYTAIIRKEAL"
     gene            complement(22075..23292)
                     /locus_tag="O7798_000897"
     CDS             complement(22075..23292)
                     /locus_tag="O7798_000897"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499549.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polyisoprenyl-teichoic acid--peptidoglycan
                     teichoic acid transferase"
                     /protein_id="HDC2863166.1"
                     /translation="MNKFLKYFLILLALVLIVVPIVFATLLFKTSQDAFESSQDSKNA
                     NRQSNLRDNKVNPEEQPISILFLGIDDNDGRRKKGQDAEHSRSDAMILTTFNQSKHQI
                     RMLSIPRDTISYIPKVGYYDKITHAHAYGGPIAAMDSVEATMNVPVDYYVRVNMKAFV
                     EAVNELGGIYYDVPYDLNEPNTDDTGKIKIKKGYQKLNGDEALAVARTRHHDSDLKRG
                     QRQMELIKILFQKAQEVDSIDKLDNVIQIVGKNAKHNLTNSEIKALAKMYLTNDVEIK
                     TAQLKGKDDMLNGIYYYHPSVESIQKYANLLRKDLELSPINDKNDFLDQRVINHYGSL
                     IPLTPLDNSLLRKEQNDTTDKDKTSNENSDSTNNSDSSNQQQPATDQNSNQNQGGTQQ
                     APQASNNQNGVVN"
BASE COUNT         8013 a         3409 c         4054 g         8106 t
ORIGIN      
        1 aatttatatg ttgaagaaga attttatcat acatataacg aattaattgt taaatatact
       61 gaggtaaagg aataattata atgaaaaaaa tatttatgat ggtacatgag ttagatgtga
      121 ataaaggtgg tatgacctct tcgatgttca atagaagtaa agagttttat gatgcggaca
      181 tacctgctga tattgttact ttcgattaca aaggaaacta tgatgaaatt attaaagctt
      241 tgaaaaaaca aggtaaaatg gatcgaagaa cgaaaatgta taatgtattt gagtatttta
      301 aacaaatttc aaataataaa cattttaagt ctaataaatt gttatataaa catatttcag
      361 aaagactaaa aaatacgatt gaaattgaag agagtaaagg tatttcaaga tattttgata
      421 taacgactgg tacatatatt gcctacatta gaaaaagtaa atctgaaaaa gtgattgatt
      481 tctttaaaga taataaacga attgaacggt ttagttttat agataataaa gtgcatatga
      541 aggaaacatt taatgtagat aataaagttt gttatcaagt attttatgat gaaaagggat
      601 acccatatat ttcaaggaat attaatgcta ataatggtgc tgtaggtaaa acttatgtgt
      661 tagttaataa aaaagaattt aaaaacaatt tagcactgtg tgtttactat ttagaaaaac
      721 taataaaaga ttctaaagat agtattatga tttgtgatgg accagggagt tttccaaaaa
      781 tgtttaatac aaatcataaa aatgctcaga aatatggcgt tattcatgtt aatcatcatg
      841 aaaatttcga tgatacgggt gcatttaaaa aaagtgagaa atatattatt gagaatgcga
      901 ataaaattaa cggtgtaatt gtattaacag aggcacaaag attagatatt cttaatcaat
      961 ttgatgtaga aaatattttc actattagca attttgttaa gatacataat gctccaaaac
     1021 attttcaaac tgaaaaaatc gtaggtcata tttctagaat ggtaccaacg aagcgaattg
     1081 atttgcttat tgaagtggct gagttagtcg taaaaaaaga taatgctgtt aaatttcata
     1141 tatatggaga aggatctgtc aaagataaaa tagctaaaat gattgaagat aaaaatttag
     1201 aaagaaatgt ttttcttaaa ggatatacaa caactccaca aaaatgcttg gaagatttta
     1261 aattagtcgt ttctacatct caatatgaag gtcaagggtt aagtatgata gaagcaatga
     1321 tttctaaaag gcctgttgtt gcctttgaca tcaaatacgg accaagtgat tttatagaag
     1381 ataataaaaa tggttattta atagaaaacc ataatattaa cgacatggct gataaaatac
     1441 ttcagcttgt taataatgat gtattagcag cggagtttgg ttcgaaagcg agagaaaaca
     1501 ttatagaaaa atattcaacg gaatcaatat tagaaaaatg gttaaatctt ttcaatagct
     1561 aaatgaaaaa atcctaggta ttcatgagta cctaggattt ttacgcatga taaatacaaa
     1621 aaaagagagg atagtcctct caaacaatag ttaataaaat tgtagccatt tcttccagct
     1681 gtaactacta atacaagcta agttcattac gatatgtatg atttcaaatt cataaccact
     1741 tacatatcct cttgtaagtt taagtgtgaa gattgagcct aacataacac aaatataaaa
     1801 aacattaaca taaggcgtta aaaagccgat aataagtgct aaacctccaa caacttcacc
     1861 aattgacatc aatactgcga tggtaggtgg taaacctaaa gagcctaaga agtgaattgt
     1921 tccatctaaa tcaacaaatt tcaaagtacc atgcactaag aatgatgttg ctaacatcca
     1981 tctaattaaa agcataccta atttcatcat gtcacctcca acattcatat ttttaaaaca
     2041 tagtccaaat tatatttgta aacatgtgga aagtaaagat tttttataag attaattatt
     2101 aaatatttat taaatattct attgtattga acaattgttg tagaaagatg tttaagtcat
     2161 cagttacttt ttgtatttat aaataaagat tagtacagca tagtgcaaag attataggga
     2221 aatgaattaa ctattgcatc gctatttatg aatcgtaaac actattatga aattgcgaga
     2281 gtagtatgga caattagaat gatggtttga gataaatgag tgttattaac cagtgcgtca
     2341 ttttcaaaat tagatgccat ttgctgttta taataagaag atttgataat taactatgat
     2401 aagaaaaaat aataatcccc taaatacatt ataaaaaaat taaatgataa aataataata
     2461 tatatttcta ctaaagttgt ttggaggtaa atgtgtgaat aggaatatcg ttaaactagt
     2521 tgtgttcatg ctaattttag ttgtagcagt agcgggttgt ggtcaaaaag atactgaaga
     2581 gaaaactgaa atgacgacaa taaaagatga attaggaact gaaaaaatta agaaaaatcc
     2641 taaacgtgtt gttgtattag aatatagttt tgctgattat ttagcagcat tagatatgaa
     2701 acctgttggt attgcagatg atggcagcac taaaaatata acaaagtcag taagagataa
     2761 gattggggca tatgaatcgg ttggatctag accgcaaccg aatatggaag tgataagtaa
     2821 attaaaaccg gatttgatca ttgcagatgt tagcagacat aagaaaatca aatcagaatt
     2881 gagcaaaatt gctccgacaa tcatgttagt tagcggtacg ggagattata atgcaaatat
     2941 tgaagcattt aaaacagtcg ctaaagcagt aggcaaagag aaagaaggcg agaagcgtct
     3001 ggaaaagcat gataaaatat tagcggagat tagaaagaaa attgaacaga gtacgttaaa
     3061 atctgcattt gcattcggta tctcaagagc aggtatgttt attaataatg aagatacatt
     3121 tatgggacaa ttcttaatta aaatgggtat tcaacctgaa gtcacaaaag acaaaactac
     3181 gcatgttggt gaacgcaagg gtggtcctta tatatattta aataatgaag aacttgccaa
     3241 tatcaatcca aaagttatgt ttttagccac tgacggaaaa acggacaaaa atagaacgaa
     3301 attcattgat cctgcagttt ggaaatcatt aaaagctgtg aaagataaca aagtttatga
     3361 cgttgaccga aataagtggt tgaaatcaag ggggattatc gcaagtgaaa gtatggcaga
     3421 agatttagaa aaaattgcag aaaaagcaaa ataaaaatac agcgctactc gtaaatcata
     3481 taagagtggc gctgtatttt taattatgtt tattatctgt cggatgtgat gatttacctg
     3541 aaagtttatt tcgaataaat ttaattacat aaccgacaag gattgtttta acagttcttt
     3601 taatgaattg gcgcatcgtt acatacctca tttctctata tcttacgaac tatataccca
     3661 ttcatatatg ctttttaaac gtcattgtca caatttaatt tttagggaat ataatataac
     3721 catctttatc tgctttttta gtaaaaatga caaaaattgc atgtattatt gagatgatgg
     3781 tagggatacc tgtccagaaa aataataagt gaaaaagacc ttgtccaaat ttatcagcat
     3841 aaaatttatg aatacctaaa cctccaagaa ataatgcaac aataacataa atggctttat
     3901 tgactttcat ttgtaaatcc tccttaacta taattctact taaattcgtt gtgaaaacca
     3961 atatttctaa ctttagaatt ttcaaacttt ctaaaattat aagtatatct ttttaaaata
     4021 agctagaatt tctatataat aaatgttaat aacgtaaaag ggaatgatga catagtgata
     4081 cgtcaagcac gtccagagga ccgatttgat attgcgaagt tagtttatat ggtttgggat
     4141 gatatggaat tagaattggt aaagcatcta cctaaagaca tggtattaga tgcaattgaa
     4201 aaaagctgtg ttgatgcaac atatcgaact ttttatcagc atattttagt ttatgaagta
     4261 gaaaataaag tagcaggttg tattattagc tatagtggtg aaaatgaatt gaaatacgaa
     4321 aaagcatggg aactacttga cttgccagaa aaaataaaac aatatggcac gccattacct
     4381 gtaaaagaag ctaaagacga tgagtattat atagaaacaa ttgcgacatt tgcagcatat
     4441 agaggtagag gcatcgcgac aaagttatta acgtcattac ttgaatcaaa tacacatgtt
     4501 aaatggagtt tgaattgcga tattaataat gaagcagcat taaagttata taaaaaagta
     4561 ggctttatat ctgatggaca gattgaatta tacaagcaca tgtatcatca tttaattgtt
     4621 aaataaaaaa actcgacagt tcgatgtaag tcgattgccg agtagtatca ttttctatta
     4681 aatgcctgca aataatgcac taatataaat acctaatgca tataataaac cgaaaaatgt
     4741 atttgtttta ccagcagcag ccattgctgg catcattgta ggcggtgtat cattcttctt
     4801 gaaacgtctg ataactttaa caggcattgg gaatgataac aacgcaagta agtaaaataa
     4861 tgagccacca ggtttaataa tgatcgtaag tacaataaag gcataagcga taaagtacat
     4921 gattgccata aatgttaaag aagcattttt acctaataga atgggtaaag ttttgcgacc
     4981 acttgcttta tctttgacac ggtcgcgaat attgttagcc atattaatta aaccgatagt
     5041 gattactata ggtacactta accaaattac ataactttga atattgccag tttgaataaa
     5101 gaatgcaata acgataataa acatacccat aaatacgcct gagaataatt caccgaaagg
     5161 cgtccatgaa atagggaaag ggccacctgt atataggtaa ccaacagcca tacatactaa
     5221 tccaactggt aataaccaaa atgaagagtt agcagctaaa aacaaaccta atattgctgc
     5281 taagatgtaa aatgcaatgg ctaatcgtag cacaagctct gggctcatac cgttgcgaac
     5341 aatggcacca ccaatgccta cagattcatg atcatcaagg ccttttttat aatcatagta
     5401 ttcattaaac atattagttg ctgcttgaat aagtaagcat gctagtaaca tggcaatgaa
     5461 taggctgatt ttaatatgat cttcgctacc aagaaaatat attttagatg ctgctgtacc
     5521 aactaaaacg ggtactacgg aagcagttaa tgtatgagga cgcattaaat gccaatattt
     5581 cttaactgta gaatattgct gatattgatt actcattgaa tacaaaacct ctttaaatca
     5641 tattttttat aacaaagata ttttaataga aagtagcata aaggtcaatt gacgtgaaaa
     5701 attgcaagat aagtttaagc aattcttgta acacaattat ccaaaaatga tacaatataa
     5761 taatgagtga aaaaagacga agaaagaagt gaaatggatg gctacgggcg tattagagga
     5821 cgatattgtc aaagagatat atggcagctc aaaggaatgg gtttcagttg aagtgaaatt
     5881 atcacagtca ctagacccga gcacattatt tcatctcact gacaatgagg caggagatcg
     5941 cttttatatg cgtttgaatg ataatcgaac gtcatatttt ggctacaaag caattcaatt
     6001 attcaaaaat aattctaaaa ataaacaatc tatttttaaa gactgggaaa aattaaaaca
     6061 taacatcaca tttatacatc cgcaatctga gaaacatcat cttcgagttg ttggagggtt
     6121 ccaattttca agtcataaat cagatgatga atggcgagag tttggactaa atcattttgt
     6181 attacctgaa gttttaattt caactgataa taatgggaca tttttaactt atacagttaa
     6241 aagggaaagt tttactgttg aggcattgaa cgatttaatg gatttgttca acaatatatc
     6301 ggacatagat gtggacgagc aaattgggga aattactaga aatgaagata tttataaaga
     6361 tgactggcgt caacttgtag tagaagctat agaatctatt aataatgaag aaaaaattgt
     6421 actagcacgt agacggttaa taaagttcga taaagatatc agtattccat atattctaaa
     6481 gcaagcatat tctaaagaaa aaaacagtta tatattcttg ttagaatcac aagattctat
     6541 attcttttca caaacacctg aacaattaat aaaggtcaat aataaaatac tatcgactaa
     6601 agctgtagca ggtacaatta aacgttcaca agatgaggac gaagatacaa aaaatgttga
     6661 agcattttta aaagataata aaaacttaat cgaacatcga tttgttgttg acagtatttt
     6721 acatgatatt aaaccttata tcactgaatt acattatgat aagacgccta aaattctaaa
     6781 aaatgatcat ttatatcact tgtacactga aataaaggcg ccactgaagg atgattcgta
     6841 tattagttta attgataatt tacatccaac acctgcttta ggtggctatc caaaagaatt
     6901 tgcaatggat tttattgagc agaaagaatt tggtacgcga ggattatatg gtgcaccggt
     6961 tggctatata gatatatacg atgattgtga atttattgtt gcaattcgtt cgatgcttat
     7021 taagaaagca caagcaactt tatttgctgg gtgtggcatt gttaaagatt ctgatccaga
     7081 tagtgaattg gcagaaacga accttaagtt cacacctatg atgaatgcat taggagtcga
     7141 tatgaatggg aaatcataaa gcagctttaa cgaagcaagt ttttacattt gcatctgagt
     7201 tatatgcgta cggcgtaagg gaagtagtta tcagtccggg atcacgctca acgccacttg
     7261 cacttgcatt tgaagcacat ccaaatatta aaacatggat acaccccgat gagcgaagtg
     7321 cagcgttttt tgcagttggg ttaattaaag gcagtgaaag acctgtcgct atattatgta
     7381 cgtcaggtac agcagcagcg aattatacgc ctgcaattgc tgaaagccaa attagtagaa
     7441 ttcctttaat cgttttaaca agtgaccgtc cgcatgaatt aagaagtgta ggcgcaccac
     7501 aagcgattaa tcaagtaaat atgtttaata attatgtaag ttatgagttc gatatgccta
     7561 ttgcggatga tagtaaagag accattgatg caatttacta tcaaatgcaa attgctagtc
     7621 aatatttata tggaccacat aaagggccaa ttcattttaa cttgccattt agagatccgt
     7681 taacacctga tttgaatgca acagaattgt taacttctga gatgaagatt ttaccgcact
     7741 atcaaaaaag tatagatgca tcggcattaa gacacatttt aaataagaaa aaaggtttaa
     7801 ttattgtagg ggatatgcag caccaagaag ttgatcaaat actaacgtat tcaacgatat
     7861 atgatttgcc tattttagct gatcctttaa gtcatttaag aaaatttgat catccgaatg
     7921 ttatctgtac atatgatttg ctgtttagaa gcggcttaga cttaaatgtg gatttcgtaa
     7981 ttcgtgttgg gaaaccagtg atttctaaaa agttaaatca atggttaaag aaaactgatg
     8041 catttcaaat attagtgcaa aacaatgata agattgatgt ctttccgata gcgccagata
     8101 tttcatatga gatttctgcg aatgatttct ttaggtcatt aatggaagac acgacagtta
     8161 atcgcgtaag ttggttagaa aaatggcaat gcttagagaa aaaagggcgt aaagaaatta
     8221 aatgttattt ggaacaagct acagatgaga gtgcattcgt tggtgaattg attaagaaaa
     8281 catctgaaaa agatgcatta tttattagta atagtatgcc tatcagagat gtagataact
     8341 tgttattgaa taaaaatata gatgtctatg cgaatcgtgg tgcgaatggt attgatggta
     8401 tcgcttcaac tgcactgggt atggctgtgc ataaacgaat aacattattg ataggtgatt
     8461 tatcatttta tcatgatatg aatggactat taatgtcaaa attaaataat attcagatga
     8521 atattgtatt attgaacaac gatggtggcg gtattttttc atatttacca caaaaagaaa
     8581 gtgcaactga ctattttgaa cggttgtttg gcacaccgac gggattggat ttcgagtata
     8641 cagctaagtt atatcaattc gattttaaac gttttaacag tgtttcagaa tttaaaaatg
     8701 ccacattgtt atctgaaact tcgacgattt atgaattgat aacgaatcgc gaagataact
     8761 ttaaacagca tcaaatttta taccagaaat tgagtgaaat gattcatgac acattataaa
     8821 ttttatgaag caaacgttga gaccaatcaa gttttagtat ttctgcatgg atttcttagc
     8881 gacagccgta cttatcataa tcacatcgaa aaatttactg ataactatca tgtcatcact
     8941 atagacttac caggccatgg cgaagatcag tcttcaatgg atgaaacgtg gaattttgat
     9001 tatattacga cgttgttaga ccgaatttta gataaatata aagataaatc aataacattg
     9061 tttggatatt caatgggtgg gcgtgttgca ttatattatg caattaatgg tcacatccct
     9121 atatctaatt tgatattaga aagtacgtca ccaggtatta aagaagaagc aaatcaattg
     9181 gaacgccgtc ttgttgatga tgcacgtgct aaagtattag acatagcagg tattgaatta
     9241 tttgttaatg attgggaaaa gttgccatta tttcaatcgc aactagaatt accagttgaa
     9301 atacaacatc aaataagaca acaacgattg tctcaatcgc cacataaaat ggccaaagca
     9361 ttaagagatt atggtacagg tcaaatgcca aacttatggc cgcgcctgaa agaaattaaa
     9421 gtaccaacat taatattagc tggagaatat gatgaaaaat ttgtacagat tgcgaaaaaa
     9481 atggcaaatt taattcctaa tagtaaatgt aaattaattt ctgctacagg tcatacaatt
     9541 catgtggaag atagtgatga atttgataca atgatattag gatttttaaa ggaggagcaa
     9601 aatgactaac agacaatggg aaacacttag agaatatgat gaaatcaaat atgaatttta
     9661 cgaagggatt gctaaggtaa caataaatcg ccctgaagta cgcaatgcgt ttacacctaa
     9721 aacagttgct gaaatgattg acgcattttc acgtgcacgt gatgatcaaa acgtttcagt
     9781 tatcgtatta actggtgaag gtgatttagc attctgttct ggtggtgacc agaagaaacg
     9841 tggacatggt ggttatgtag gtgaagacca aatccctcgc ttaaatgtat tagatttaca
     9901 gcgtttaatt cgtattattc caaaaccggt tatcgcgatg gtaaaaggtt atgctgtagg
     9961 tggcggtaat gtactaaatg ttgtttgtga cttaacgatt gctgctgata atgctatttt
    10021 tggacaaact ggtcctaaag taggttcatt tgatgcgggt tatggttcag gatatttagc
    10081 acgtatcgtt ggacataaga aagcacgtga aatttggtac ttatgtcgtc aatacaatgc
    10141 acaagaagct ttagatatgg gtctagtaaa tacagtggta cctttagaga aagttgaaga
    10201 tgaaactgtg caatggtgta aagagattat gaaacactca ccaacagcgt tacgattcct
    10261 taaagcagct atgaatgctg acacagatgg tttagctggt ttacaacaaa tggctgggga
    10321 tgcaacattg ctttattaca caactgatga agcgaaagaa ggccgtgatg cgtttaaaga
    10381 aaaacgtgat cctgacttcg atcaattccc taaattccca taagttattt tgaatatgat
    10441 attaagtcac ttgcgtcgtt tattagcgac gataggtggc ttttttattt tataagaatt
    10501 taaaagggca ttttaattaa ttatcataaa gataagatag tttgagaaaa attaatagag
    10561 aaagaataaa tgttaaagat tattattaca atgaaaaaac gagctggtga gaaattgaat
    10621 tctcgccaac ccgctttatg aagtgaaatc atttaaatta gttatactaa gcgctcataa
    10681 acgattggtc gcgaagtgcc aataccttgt ttggatgacg tttgcatgag gatatgctgt
    10741 gtatcatcat aatcaagaat ataaatgatt tcttcattat caatagatga aaatttaatg
    10801 cgttgatgtg ccgtatctat aaaaagaata tgatattgat tgtgacttgt atcatcgcca
    10861 tgacgtatac aaattgattt ttgtaattga tgattactcc aattaccaat gaataaattg
    10921 atattggttt gttctagatg tgtgagtttg gttgtgtcgt aaactaaatt tataaattgt
    10981 agttgataca tagttttacc tgcctttaat caatatctat attacttttt agtaacctat
    11041 cattgaacca taccagttat aatcacgatt gaatgataaa tgtaataggc ttgaatctgc
    11101 atcttggatt gataattctg tatcccaagg attccagtaa ataagttttt cttggtcatt
    11161 aattttagca ttaccaacaa ctgctagcgc atgtcctaaa tgtgggtcat tagggttttg
    11221 agatacactt tgtgcaagga tcataattcc tacattatct tttgtaagtt gatcaacttg
    11281 ttcatatgat ggtacgcctt cttgataatg aatatctctg ccttgtgatt taccgtattc
    11341 aatcatttga ttagggaatg ttgcacaatt aggaaggtct tgctcactta cttcagggta
    11401 taatgtacgc ataatatcat gtgcattata agtgtctgta tttttagttg catttaataa
    11461 tgctgccata ctgaatcctg cacaccatga gttatcgaat tgttgttctc taattttgaa
    11521 gttttttaat gtattttcat attgaacttg atcttcttgt atcgcttcgt tttcttcaac
    11581 tttagtaggt gttactgtat tttttaactc ttgtttcaat tttgctgaaa ctgttttagc
    11641 actttctttt tcttttacat taccaggtag aggcgtagct tttactaatc taactttgcc
    11701 atcttcttca aaataaaacc ctttttcatc agtaagaaca gtgatatttg aatttttatc
    11761 tttaatttgg tctaaatctt tagcgatgaa gtttgaaatt ttaacactgt aattcatgtc
    11821 ttcttttgat ttgtttaaat catctttatt tttaggacta agtgttaaag tataaacaat
    11881 tttaccgtct tttataactg gataatagta actattatct tcttcaccat taaatttata
    11941 aattttaaaa gcttcgccaa gttcatattt accagttttt gcattacttt gtttatctaa
    12001 tgctttagca taaccagcaa attgttgttg tgctagatct tttacttttt gaggtacttt
    12061 gtcactctta acattaattt ctagctgttt agagtgtgaa tcggctttgg ctttattgtt
    12121 attagcaaat gcgcctagtg ataaaataag cattgaaacc attatgatgc ttataatatt
    12181 gaatactcta gatttacatg aactattcat ataataccct ccatttaaat caaaatattt
    12241 tacgttgcta agactttgct tctattttat ctagacgaac ttaattgtta attaagctgc
    12301 atctggattg tctgaattat tgttatcgcc attgtctgga ttatcagggt tgttagggtt
    12361 gtcagggtta tttggttcat ctgggttgtt agggttatca ggattgttag ggttatcagg
    12421 attatctggg ttattaggtt ggtcatcgtt ggcaaaatgg atatcttcaa tattttgttt
    12481 taagaagttg cgtacatttt cattaataaa taccgcacca ttaaattcat ttggtacacc
    12541 gccccaatga attccgatca cttcattttt ttcattaaat acaggtgaac ctgaattacc
    12601 accagttgta cttaaatcat attgcatagc ttcgcctttg aggtaagtga tttttccttt
    12661 actttcccac attgttgcta caggtttatc accaggatat cctgttacag taatattttg
    12721 gttaacttgt gtttcagcat tattactcat tgttgctggt ttaactactt caccaatatg
    12781 tttgttttgc tcattagggg agaatttaac tattgctaaa tcaccttcgc ctgaatattt
    12841 agtgatttgt tcagcagtga aaccaccatt tggataattg tcttggttaa ttgcagaagg
    12901 gaatgctttt aaagcatgag gatcaccgtg cgtagcatct acgacgtgtt tatttgttaa
    12961 aagagtatct ttacctacaa ctacaccgga agcaataaat gtaccagtag gtgcttcaac
    13021 ttgaatataa gttacgggtg cataatgacc attcgttgta tctgtgattt ggtgacgatc
    13081 gttatttggt aatataacat ttgcgtgttc acgttgttct aatggtttaa ggttaccgcc
    13141 tttttgaatc ttaggtgttt gctgtttgct tgactgcgtt tgttgtggat gattgtccat
    13201 agcctttgaa gataacgcgt ttgctgctgg agaactcaca agtgtcgctg ttgtcaaagt
    13261 tgcaacgaat aaagaactaa cttttaaaaa tttacctttc atctaaaaac ctccaaaaaa
    13321 tttatttaca agttaaatat aacaataaaa atttttaagt caatgagaat atataaataa
    13381 attaaaaaag tttttgtaaa gattagagtt tacaaaaaca ttaagggaat taaaattgaa
    13441 ttgtattata ctttattcaa ttgagttaaa ttgataagat cgtcaattgt ttgcatttat
    13501 ctaaaagaat aaataagaaa ggaattgaga gcgaatggaa agtatttgtt tataataata
    13561 aatagtaact tttgaataat aattgtttgg ccaaaggtag attaatatga atggtgatat
    13621 attatttgag tgcttaagtt tcgaagaaca attataagtt agcatattaa acccttttga
    13681 tagaatcatt ttgagtgagg tgtttaaagg agaggaatat aactcggtag tatttacagt
    13741 ctctatagag tattatttaa aacttataga atataaaaaa ctgaacgtac tatgaattta
    13801 gttcacgacg tccagttcaa catatcattt ttatttagta tttaaatatt tagcaagtct
    13861 cttcatacct tcttttaaaa catccatttc ataagcatag gaaatcctta caaatccttt
    13921 accgaattct gtaaaggatg agcctggaac gattgctaaa tgtgttgatt caagtaaatc
    13981 gacacaaaat tcgaaatcgt catcggtgat atgtttaata cttgggaaaa tataaaacgc
    14041 gccttcaggt tgagcggtaa tctcaaaacc taatttagtt aattcagata ctaaataatt
    14101 tcttcgttct acataagctt cgttcatata tttaggagct tctaatcctt cgttaagtgc
    14161 tgttatacat gctatttgag ctggaacatt ggcacaaata caattatagg cgtgcataaa
    14221 tgttaattta tcaatcaaat attgaggtcc taatagaaaa ccaattctta ttccggttgc
    14281 tgagtgtgat ttacttaaac caccaattaa tattaattga tcacgaatgt cttcaaattc
    14341 agcgaaggat acatgtttac cactaaatgt attttcagca taaatctcat cgctaataat
    14401 aaataacgga tattttttta atacatttac gatatttaaa acttcatttc tttttaaaac
    14461 tacgccagtt ggattagtcg gataatttaa caagacagct tttgtctttg gagaaatatg
    14521 actttctaat gcatcaggtg taattttaaa ttgtgttgct gttgtatcaa tataaattgg
    14581 tttaccacct agtacttcga tgagtggtat gtagcctgca taaattggtc ccggtattat
    14641 aatttcatct ccaggctcta tgatagaacg taacgttgtg tctattgctt cacttgctcc
    14701 atttgtcaca ataatttctt caggatcata ggaaaaatga taacgatttt tgaagtattg
    14761 actaattgct tcgcgagttt ctaataaccc tttattgtga gagtatgatg tcttgtcatt
    14821 gttaatagca tcaatatatg cctttttcac aacatcaggc atcgggaagt ctggttggcc
    14881 aatagttaaa ttaacacaat catccaaatt attcatacga tttgaaaatt ggcgaatact
    14941 tggtgctctt aaatatttag aattagaatt taaagaaagt ttcatttgtg acacctcaaa
    15001 tataaatcaa atattgtcta aaaatttaga aattaataat atcataacat acttttaaag
    15061 caaaaaaggg taaattactt aagctttatt tgaaaaacga aaaatgtcta aatacactgt
    15121 agtaactact tttcaaaatg aataaagtgg ttacagttaa tgtacttaga cagtataaaa
    15181 ttatgaatct ttaaactgtg atggtctttg taaattaatt attggatttg tccatttaca
    15241 aacaaagttt gtagataata catatacgat gattacagat atacttatta aataaagata
    15301 agtcattaat gatataggat tatcgaatgg gtaccattca aatcctctaa caatgccaat
    15361 aattaaacca tgtaataaat atacgtatag cgtacgacta ccaatataag tatataattt
    15421 tttctttgtt gacattaaat ttagaaacgc agtcattgcg attaatataa ttccatataa
    15481 tataagtcgt ttaaaaggac tgaatatact ctgtccttca ttttcaagtg aagtatatgg
    15541 tgaacttccc aataaccaat ctgcattgat aggatgaatc acgtaaacga taaaaaacaa
    15601 aataaaggta atgatagata ctggtattag ttttttattt ttaaaaatag ccgtatgttt
    15661 tttggtgaaa atgtaaccta gataaaatat tgggaaaaat acgattgtcc ttgaaatgct
    15721 taagtagcta tcgatgttat ctgaaaaacc tgctccaata gatataataa ttgaaactga
    15781 tagcacttta tatggattaa atcttctaac tattactaaa atgacatgaa agaaaaatag
    15841 cgtgatcaaa aaccataacg caaatactgg gttaaaagga tcaagttgta attcgtcact
    15901 tttacctgtt aagaaataat aaattgaaaa gaatgcaaaa aatatcatat aaggtactat
    15961 caaacgtttt gaaatttttt ctaaatagta tggtttatca atatttttcg cgaaataacc
    16021 agatataaac aaaaatgttg gcatatggaa actataaata actaggtata atgctgataa
    16081 atatttatcg ccactagtgt agggttgtaa catatgtcca aatacgacta ataatattaa
    16141 aattgctctt gcgttgtcaa aaaaataatc tctctctttt aatgaagtca tattttatct
    16201 cctttatgtc cataagactc ttactaattt attatatttt gtattagtta tgcaacaaat
    16261 ttgtctattg tgtcgaatag tattgtaaaa attataaaaa aagcatataa tattataaat
    16321 aatatgtagt ggagtagaac aacatgtata aacaacttga aaaacttatt acactgacta
    16381 acaatgactt aaacttagtg aatagaagat ttggacaacg cacggatatc acatctgaac
    16441 agctagaact tctccgtatt ttatttaatt acgatcgctt atcacagtat gatttgacga
    16501 tgaagattag cagggaacaa tctatagttt caaggtggat taagaaatta gttttgaaag
    16561 ggtacatcac aagtcaacaa tctagcgaag atttaagatg taaagaatta attttgactg
    16621 atcaagcacg tacattaatt tcacaaataa ataatgcacg ttgcgaattg attgaagcaa
    16681 gatgtcaatg tttatcggaa gtcgaattag acaatttaaa tcaattactt gataagttaa
    16741 atcaacgacg catatcgttg taacacgaca atagcaaaca cataatttag tgtcgttgtg
    16801 cacacaacaa aaattgaatc atgaattaca agcaaaagta gcggtgattg ttaaaattga
    16861 tggtaaacaa tcaccgctat ttttgcttgt gtatgtataa aaaagggatc aaaggtcatc
    16921 ccccatgatt gatagtgggg gatgactttt gatcctatgt tcatgttgct tatttatatt
    16981 gtgggatgtc gaagtatttg ccgacttcgc caattttatc atagtagcct ttgatgattt
    17041 tagcattgat gttagcccaa tctacatctg tagcatattg gtgtgttcct ggatgtgcag
    17101 gattccatct cattttgtaa agtgtatttt gaccagcttt tacatatgag ttgccgatga
    17161 atttagcacc accaacgatt gcttttgata ctgtgtccca accagcttgt ttagcatatt
    17221 taataccttc acgtaaagga tcgttatcat atgcagcaat accaaatacg ttatggtatt
    17281 tcgtgtttga gttagttaca actttgttgt tcactacatc tgcacctttc gctaattgag
    17341 aagtaccgtt acctgtttct aatagggcat gtgagataag ataaacttca ttaatgccat
    17401 acatttgagc agctttgtta aatgcagcac cttggttttc taatacacct ttacctttta
    17461 agaattgatt aattttatca atagaaatat tttgtggttg gtctaagcgt aagaattgat
    17521 attttaatgc tggatcttga gctaaacgct tcgtatccat tgcatgctta acatcattaa
    17581 agttagcatc tgtccactta cctggtacac gttgtacttg tggtttatat tgtaaaccag
    17641 cttgtatttg agcaacttgg tttaatgtca tacctgtttg attatactta attaattctt
    17701 tagctaaatc agttgattta atccatgcta atttaccgtt agataattta ccatagtacc
    17761 aagtttgtcc attaatgact tgttctttaa caactgcgaa tggttgttca ttaaatgctt
    17821 ttaatgagta tttagctgta tcagaatttg gtgttacata gtaataacca ttaccatttt
    17881 taattacata agtgtagtta taatctttgg cagctgatgt agttggtttc acagcagttg
    17941 gtgcagttaa atcttttgca tttacccaac cagtgcggtt attaatagta ccgtataaat
    18001 aaacatcttt gcctacagat acttgtttcg ttgcattaaa tgtaccttga gcaatgttat
    18061 tgcctgttaa aatgacttgg tttttagtac cccaaggaac cattgataag ccgttatttg
    18121 atttattaac agtatatttt tgagtcgttt taacttcttt gcctaagttt tgaacattta
    18181 agtcttttac attgaaccaa cctaatggga tgttatggct tgtattgttt aataatacat
    18241 acgtttcatt accatgagca cgctcttttg ttacatagaa cgtacggtct gcatatttcg
    18301 caccgttttt cgctgttttt tcataaacag aagcacgaat accagtgttg tttggtttaa
    18361 cttgagcaat cttgctaact gtttgagtcg tttgtggttt agtaacagta taagctttta
    18421 cagctgtttt tggttgtgct actgcttttt taggtgcagc aggtacagct aaatatgctt
    18481 tacttaccca accagattta ccatttacag ttccaaataa atagatagat ttatcaattt
    18541 gttgttgctt agtcgcttta aaagtttggt tacctgtacc agaaactgca ccagcttctt
    18601 gtttataagt gccccaaggt actgaatata atttagtgcc tggttttact gtatatgttt
    18661 gcattacatt tacaggtgat tttgcattgt tataaataac gtcaccttgt ttaacccaac
    18721 caattaaagt tggactattg taatctttaa ctaagtagaa tttgtttcca cctaaacttg
    18781 cttcttttgt tacagcaaat gttttttgaa cttctttcgt tggcttacca gttttgtcat
    18841 aaactgtagt gaataagcca ttgtttttag cattaatttg agcaacaccg tttaatgatg
    18901 aaactgttaa tttattattt gttgtaggtg ttgatggctt aggtgttggt gtaggcgtag
    18961 gtttagcagt atcaactaaa tatgctttac ttacccaacc agatttacca ttcacagagc
    19021 catataaata aattgattta tcaatttgtt gttgctttga agccttaaat gtttggtttc
    19081 cagagccaga cacactacca gcaacttgtt tagatgtacc ccaaggtact gtataaagtt
    19141 tcgtaccagg tttgattgaa tatgattgat ttacatttac aggtgattta gctgtgttgt
    19201 aaaccacatc gccttcttta acccaaccaa atttattacc agaattgtaa tcttgaacaa
    19261 gatagaattt ttgattacct aatgtagctg ttttagatac agcaaatgtt ttttgaactt
    19321 cattagttgc tttaccagtt ttgtcgtata cagtagtata taaaccacta tttgttggtt
    19381 tgatttgtgc gacaccattg tttgcagcaa ctgttaattt accagttgat ggtttcgacg
    19441 gtgttgttgg ttttgatggt gtagtagggg tagttgtaga ttgcgtaccc catggcgcca
    19501 ctttacccat ttttattaaa tatttttcat taattaagtc atataattga tcataactat
    19561 aattatgact tcttaaatat ccatgtggat cggcatggtc agtaccacct aaatatttac
    19621 ttacagcgta gtgagtccat actgtaccat ttccatcata ctcagcactg tctggtttta
    19681 aaccataata ttgtaattgt gtagctgcat agtcagcata gttattcatt gaacgtgcaa
    19741 atgaagcata gtcgtgtgtg tgtacgattt caacattgat gaatctaggg ttaccgactg
    19801 caccgacacc ccaagataag taatccgttg gtgctgtttc gattatacga tccccatcaa
    19861 caaatgcatg tacgaatgcg ttttgatagt tatttttcat ataactaatt tcaccattta
    19921 tcgtcgaacg atcattagct gtatcatgaa ctacgatacc ttcaggacga cctacgccgt
    19981 tacggtatgc gtatttaggg aagtaagatg tataatcttc ttcaatttta ggtgctttta
    20041 agttattttt acgaatgtaa tcgttaattg aagagtttac ttgtggttta tattttggca
    20101 aactcgtttt tggtgttgca gcaactgatc ttggttgtgc tgaagcgcta aaagtagtta
    20161 ctttaggtgt cgcttcagtt ttagctttag gtgctgatgt agttgcagct ttaggtgctg
    20221 cggttttata ttgcgtttca agagctgcag gtttagcagc tgatttaatt aattctggat
    20281 taatttgatt ttctgaatta tcatcttcat catcaactaa actataacca gcatttgtaa
    20341 cattagtgtt agttttaggt gctgtagtgc ttgttgactt tgcaacaggc tgcgtattat
    20401 ttgtagtcgc tgattgatta gcacgagtgt caccatttac ttgtgcagta tcaacttttt
    20461 gacttacttg agcattgcct gttttgttat ttgctgtttt tggttggaca atagcagggt
    20521 cttgatatac ttgagtgcca gaaatgtttt gcgttggatt ttttacctca gcttttgctt
    20581 gttcagtagt tgctttaact ttattactat ctaaaacgtt tttattagta gtttgatctt
    20641 gtgtcgtctc agctgcttga acttgatgtg cagtgactgc tgaacctaca agcgttaatg
    20701 caaccattga tggtagtttg taattgaatt ttttcgccat tctatttatt actcctaaca
    20761 tttattaatt attactaaca ttatagtacc tgttttatat acctgtgcgt atttaaccaa
    20821 tttgtaatat actcttaatt tacattttca ctgtaaaaaa atgaaaaaaa ttttgaatct
    20881 caatggtgac gtgacaaatc aaatagaatt gatgtcaatt taagaattgg tttattacaa
    20941 atgtttctaa aatagataca acttttttta attaagcgag gttaactttt ttgtcatttc
    21001 aatatgctcg atgccttcct caagaaatat attacctctc attttaaagt ttaaactttc
    21061 ataaaatggg atagcatgac attgggcatt catagtagct acgtaaaaac cttcatcttt
    21121 agctaatgat tctacagctt gcataagcat tctacccatt ccttgtccac gatgtgattt
    21181 catcacagct actcgttcta ttttgacagt tgtttcatta atagggcgta ttcgagcagt
    21241 ggcaactggc tgtccattat catatccaat gaggtgaata gattcagatt catattcatc
    21301 aatttcactt tcctcaggga cgccttgttc ttctacaaac actttctttc ttatatagaa
    21361 gcaatcttct aacatctttt gattgtttac ttttgaaaac ataaaattcc tccacatcct
    21421 aacaaaatca tttacattta atttactaat aataacatag aataacgatt gttattttcc
    21481 tcaaaaataa ttagacataa aaaagctata aagatgattg ttgtgaatca tctttatagc
    21541 taattaatta ttaatgttat agtgcttctt ttctaataat tgctgtatat tgccaaaaga
    21601 ttcgcatttg agcaatattc caattattca ttcccattgt aaatcctgaa ggcttaaata
    21661 tattcacatc agttacttct aaagctgctg caactaaata ttgtaatgga atgctaagtg
    21721 atttcattgt ttcggtaatg ccattttcat catataccca tgaaaatggt aactctgatt
    21781 cgaaaacatc aacactattg aaaatttcag gtagggctaa aatataacat gcaccatcta
    21841 caataggatt gtcgatacta tttttgtaat aaattaggag tgcttcatag ttttctcgat
    21901 gctcatgatt gacgtaaaaa aattcacttc taaaatgagc catatcttgg ctatgaatga
    21961 tttgttgttc taacatatta aacatgccat ttatatttgc aatcttttcg tatgtttttc
    22021 tactcatgta tgatgctcct ttcataaata gtaaatgtta atcgtcatat aatattaatt
    22081 tacaacacca ttttggttat ttgaagcttg tggcgcttgt tgtgtgccac cttgattttg
    22141 atttgagttt tgatctgtag caggttgttg ttgattgctg gaatcactgt tattagttga
    22201 atcactgttc tcgttagatg tcttatcttt atctgtcgta tcattttgtt cttttctcaa
    22261 taaactatta tctaaaggcg ttaatggtat taatgaacca taatgattaa tgacacgttg
    22321 atctaagaaa tcatttttat cattaatagg tgataattct aagtctttac gaagtaagtt
    22381 tgcatatttt tgaatgcttt caacacttgg atgataatag taaataccat ttaacatatc
    22441 atctttacct tttaattgcg cagttttaat ttcaacatca tttgttaagt acatttttgc
    22501 taaagcttta atttcagagt tagttaaatt atgctttgca tttttaccta caatttgaat
    22561 cacgttatca agtttatcaa tagaatcaac ttcctgtgct ttttggaata aaatcttaat
    22621 taattccatt tgacgttgtc cacgttttaa gtctgaatca tgatgtctag ttctagcaac
    22681 tgctaaagcc tcatcaccat ttaatttttg gtaccctttt ttaattttaa tcttaccagt
    22741 atcatctgtg ttaggttcat ttaagtcgta tggcacatca tagtatatgc caccaagctc
    22801 atttacagcc tcgacaaatg ctttcatatt gactctcaca taataatcaa caggtacatt
    22861 catggtagct tctaccgaat ccattgcggc aattggacca ccatatgcat gtgcatgggt
    22921 aatcttatcg taatagccaa ctttaggaat gtagctgata gtatcacgtg gaatactaag
    22981 cattctaatt tgatgttttg attgattaaa agtagttaaa atcatagcgt ctgatctaga
    23041 gtgttcagca tcctgtcctt tttttcttct tccatcgtta tcatcgatac ctaagaaaag
    23101 aatagagata ggttgttctt cgggattgac tttattatct cttaagttgg attgacgatt
    23161 agcatttttg ctgtcttgag aagattcgaa tgcatcttgg gacgttttaa aaagtaacgt
    23221 agcgaagact attggaacaa caatgagaac caatgctaga aggatcaaaa agtattttaa
    23281 aaatttattc atgattgatg ctcctatatt aaatttttgt taaatcataa tcataatttt
    23341 aaaatataat tagttgaacg atatttatac aacttcatta ctaatacatt atagccttaa
    23401 attgtagtac tttatagtaa aaaatacaaa tgttatgtca aagttccttg taatttgaat
    23461 gttttgttaa aatcaaaaag catttttaaa aatataatgt gactttagta tgatgtctta
    23521 aaaaatttaa aggcgtaata taaattcgag tgatttatac aaagtgataa ggtataatta
    23581 at
//
LOCUS       DALPQQ010000025        23574 bp    DNA     linear   BCT 22-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus strain K18-6-464
            SAMD00233528-rid16434743.denovo.025, whole genome shotgun sequence.
ACCESSION   DALPQQ010000025 DALPQQ010000000
VERSION     DALPQQ010000025.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMD00233528
            Sequence Read Archive: DRR236061
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 23574)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 23574)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001543423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001543423.1
            Genome Coverage       :: 77x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/22/2022 17:09:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,811
            CDSs (total)                      :: 2,743
            Genes (coding)                    :: 2,689
            CDSs (with protein)               :: 2,689
            Genes (RNA)                       :: 68
            rRNAs                             :: 2, 4, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 4, 2 (16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 54
            CDSs (without protein)            :: 54
            Pseudo Genes (ambiguous residues) :: 0 of 54
            Pseudo Genes (frameshifted)       :: 27 of 54
            Pseudo Genes (incomplete)         :: 27 of 54
            Pseudo Genes (internal stop)      :: 10 of 54
            Pseudo Genes (multiple problems)  :: 10 of 54
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..23574
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMD00233528-rid16434743.denovo.025"
                     /strain="K18-6-464"
                     /db_xref="taxon:1280"
                     /geo_loc_name="Japan: Niigata"
     gene            34..969
                     /gene="trxB"
                     /locus_tag="O7798_000898"
     CDS             34..969
                     /gene="trxB"
                     /locus_tag="O7798_000898"
                     /EC_number="1.8.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499342.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin-disulfide reductase"
                     /protein_id="HDC2863167.1"
                     /translation="MTEIDFDIAIIGAGPAGMTAAVYASRANLKTVMIERGIPGGQMA
                     NTEEVENFPGFEMITGPDLSTKMFEHAKKFGAVYQYGDIKSVEDKGEYKVINFGNKEL
                     TAKAVIIATGAEYKKIGVPGEQELGGRGVSYCAVCDGAFFKNKRLFVIGGGDSAVEEG
                     TFLTKFADKVTIVHRRDELRAQRILQDRAFKNDKIDFIWSHTLKSINEKDGKVGSVTL
                     TSTKDGSEETHEADGVFIYIGMKPLTAPFKDLGITNDVGYIVTKDDMTTSVPGIFAAG
                     DVRDKGLRQIVTATGDGSIAAQSAAEYIEHLNDQA"
     gene            1735..2646
                     /gene="rapZ"
                     /locus_tag="O7798_000899"
     CDS             1735..2646
                     /gene="rapZ"
                     /locus_tag="O7798_000899"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499344.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNase adapter RapZ"
                     /protein_id="HDC2863168.1"
                     /translation="MDNNEKEKSKSELLVVTGLSGAGKSLVIQCLEDMGYFCVDNLPP
                     VLLPKFVELMEQGNPSLRKVAIAIDLRGKELFNSLVAVVDKVKSESDVIIDVMFLEAS
                     TEKLISRYKETRRAHPLMEQGKRSLINAINDEREHLSQIRSIANFVIDTTKLSPKELK
                     ERIRRYYEDEEFETFTINVTSFGFKHGIQMDADLVFDVRFLPNPYYVVDLRPLTGLDK
                     DVYNYVMKWKETEIFFEKLTDLLDFMIPGYKKEGKSQLVIAIGCTGGQHRSVALAERL
                     GNYLNEVFEYNVYVHHRDAHIESGEKK"
     gene            2643..3638
                     /locus_tag="O7798_000900"
     CDS             2643..3638
                     /locus_tag="O7798_000900"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499345.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YvcK family protein"
                     /protein_id="HDC2863169.1"
                     /translation="MRQIKVVLIGGGTGLSVMARGLREFPIDITAIVTVADNGGSTGK
                     IRDEMDIPAPGDIRNVIAALSDSESVLSQLFQYRFEENQISGHSLGNLLIAGMTNITN
                     DFGHAIKALSKILNIKGRVIPSTNTSVQLNAVMEDGEIVFGETNIPKKHKKIDRVFLE
                     PNDVQPMEEAIDALREADLIVLGPGSLYTSVISNLCVNGISDALIHSDAPKLYVSNVM
                     TQPGETDGYSVKDHIDAIHRQAGQPFIDYVICSTQTFNAQVLKKYEEKHSKPVEVNKA
                     ELEKESINVKTSSNLVEISENHLVRHNTKVLSTMIYDIALELISTIPFVPSDKRK"
     gene            3748..4692
                     /gene="whiA"
                     /locus_tag="O7798_000901"
     CDS             3748..4692
                     /gene="whiA"
                     /locus_tag="O7798_000901"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499346.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding protein WhiA"
                     /protein_id="HDC2863170.1"
                     /translation="MSFASEMKNELTRIDVDEMNAKAELSALIRMNGALSLSNQQFVI
                     NVQTENATTARRIYSLIKRVFNVEVEILVRKKMKLKKNNIYICRTKMKAKEILDELGI
                     LKDGIFTHEIDHSMIQDDEMRRSYLRGAFLAGGSVNNPETSSYHLEIFSQNESHAEGL
                     TKLMNSYELNAKHLERKKGSITYLKEAEKISDFLSLIGGYQALLKFEDVRIVRDMRNS
                     VNRLVNCETANLNKTVSAAMKQVESIKLIDKEIGIENLPDRLREIARIRVEHQEISLK
                     ELGEMVSTGPISKSGVNHRLRKLNDLADKIRNGEQIEL"
     gene            5265..5852
                     /gene="clpP"
                     /locus_tag="O7798_000902"
     CDS             5265..5852
                     /gene="clpP"
                     /locus_tag="O7798_000902"
                     /EC_number="3.4.21.92"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499347.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent Clp endopeptidase proteolytic
                     subunit ClpP"
                     /protein_id="HDC2863171.1"
                     /translation="MNLIPTVIETTNRGERAYDIYSRLLKDRIIMLGSQIDDNVANSI
                     VSQLLFLQAQDSEKDIYLYINSPGGSVTAGFAIYDTIQHIKPDVQTICIGMAASMGSF
                     LLAAGAKGKRFALPNAEVMIHQPLGGAQGQATEIEIAANHILKTREKLNRILSERTGQ
                     SIEKIQKDTDRDNFLTAEEAKEYGLIDEVMVPETK"
     gene            complement(6095..6997)
                     /locus_tag="O7798_000903"
     CDS             complement(6095..6997)
                     /locus_tag="O7798_000903"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499348.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR01777 family oxidoreductase"
                     /protein_id="HDC2863172.1"
                     /translation="MKQYLITGGTGMVGSQLVNEIKKSDSHITILTRHDQISNDKKIS
                     YVNWAKSGWEHKVPQNIDVVINLAGATLNKRWTPEYKQTLMLSRIQSTQALYELFKSR
                     NKAPKALFNASATGYYPPDLFMSYTEVYKTLPFDFLSDIVYQWERFAQQFEQLGTRVV
                     IGRFGIILSNEGGALQTMKLPYEYYIGGKLGSGQQWYSWIHINDLIQAILFLINNESA
                     SGPFNLTAPIPERQNLFGYTLARAMHKPHETWAPSLAMRLILGQMSTVVLDTQKVLPN
                     KIQALGFQFKYSNLKMALEDLIKE"
     gene            7700..8329
                     /locus_tag="O7798_000904"
     CDS             7700..8329
                     /locus_tag="O7798_000904"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499349.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4887 domain-containing protein"
                     /protein_id="HDC2863173.1"
                     /translation="MSNQNYDYNKNEDGSKKKMSTTAKVVSIATVLLLLGGLVFAIFA
                     YVDHSNKAKERMLNEQKQEQKEKRQKENAEKERKKKQQEEKEQNELDSQANQYQQLPQ
                     QNQYQYVPPQQQAPTKQRPAKEENDDKASKDESKDKDDKASQDKSDDNQKKTDDNKQP
                     AQPKPQPQQPTPKPNNNQQNNQSNQQAKPQAPQQNSQSTTNKQNNANDK"
     gene            8972..9985
                     /locus_tag="O7798_000905"
     CDS             8972..9985
                     /locus_tag="O7798_000905"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499350.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sugar-binding transcriptional regulator"
                     /protein_id="HDC2863174.1"
                     /translation="MKDLLQAQQKLIPDLIDKMYKRFSILTTISKNQPVGRRSLSEHM
                     DMTERVLRSETDMLKKQDLIKVKPTGMEITAEGEQLISQLKGYFDIYADDNRLSEGIK
                     NKFQIKEVHVVPGDADNSQSVKTELGRQAGQLLEGILQEDAIVAVTGGSTMACVSEAI
                     HLLPYNVFFVPARGGLGENVVFQANTIAASMAQQAGGYYTTMYVPDNVSETTYNTLLL
                     EPSVINTLDKIKQANVILHGIGDALKMAHRRQSPEKVIEQLQHHQAVGEAFGYYFDTQ
                     GQIVHKVKTIGLQLEDLESKDFIFAVAGGKSKGEAIKAYLTIAPKNTVLITDEAAAKI
                     ILE"
     gene            10038..11048
                     /gene="gap"
                     /locus_tag="O7798_000906"
     CDS             10038..11048
                     /gene="gap"
                     /locus_tag="O7798_000906"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499351.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I glyceraldehyde-3-phosphate dehydrogenase"
                     /protein_id="HDC2863175.1"
                     /translation="MAVKVAINGFGRIGRLAFRRIQEVEGLEVVAVNDLTDDDMLAHL
                     LKYDTMQGRFTGEVEVVDGGFRVNGKEVKSFSEPDASKLPWKDLNIDVVLECTGFYTD
                     KDKAQAHIEAGAKKVLISAPATGDLKTIVFNTNHQELDGSETVVSGASCTTNSLAPVA
                     KVLNDDFGLVEGLMTTIHAYTGDQNTQDAPHRKGDKRRARAAAENIIPNSTGAAKAIG
                     KVIPEIDGKLDGGAQRVPVATGSLTELTVVLEKQDVTVEQVNEAMKNASNESFGYTED
                     EIVSSDVVGMTYGSLFDATQTRVMSVGDRQLVKVAAWYDNEMSYTAQLVRTLAYLAEL
                     SK"
     gene            11187..12377
                     /locus_tag="O7798_000907"
     CDS             11187..12377
                     /locus_tag="O7798_000907"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499352.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoglycerate kinase"
                     /protein_id="HDC2863176.1"
                     /translation="MAKKIVSDLDLKGKTVLVRADFNVPLKDGEITNDNRIVQALPTI
                     QYIIEQGGKIVLFSHLGKVKEESDKAKLTLRPVAEDLSKKLDKEVVFVPETRGEKLEA
                     AIKDLKEGDVLLVENTRYEDLDGKKESKNDPELGKYWASLGDVFVNDAFGTAHREHAS
                     NVGISTHLETAAGFLMDKEIKFIGGVVNDPHKPVVAILGGAKVSDKINVIKNLVNIAD
                     KIIIGGGMAYTFLKAQGKEIGISLLEEDKIDFAKDLLEKHGDKIVLPVDTKVAKEFSN
                     DAKITVVPSDSIPADQEGMDIGPNTVKLFADELEGAHTVVWNGPMGVFEFSNFAQGTI
                     GVCKAIANLKDAITIIGGGDSAAAAISLGFENDFTHISTGGGASLEYLEGKELPGIKA
                     INNK"
     gene            12499..13260
                     /locus_tag="O7798_000908"
     CDS             12499..13260
                     /locus_tag="O7798_000908"
                     /EC_number="5.3.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499353.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="triose-phosphate isomerase"
                     /protein_id="HDC2863177.1"
                     /translation="MRTPIIAGNWKMNKTVQEAKDFVNALPTLPDSKEVESVICAPAI
                     QLDALTTAVKEGKAQGLEIGAQNTYFEDNGAFTGETSPVALADLGVKYVVIGHSERRE
                     LFHETDEEINKKAHAIFKHGMTPIICVGETDEERESGKANDVVGEQVKKAVAGLSEDQ
                     LKSVVIAYEPIWAIGTGKSSTSEDANEMCAFVRQTIADLSSKEVSEATRIQYGGSVKP
                     NNIKEYMAQTDIDGALVGGASLKVEDFVQLLEGAK"
     gene            13263..14780
                     /locus_tag="O7798_000909"
     CDS             13263..14780
                     /locus_tag="O7798_000909"
                     /EC_number="5.4.2.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499354.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2,3-bisphosphoglycerate-independent
                     phosphoglycerate mutase"
                     /protein_id="HDC2863178.1"
                     /translation="MAKKPTALIILDGFANRESEHGNAVKLANKPNFDRYYNKYPTTQ
                     IEASGLDVGLPEGQMGNSEVGHMNIGAGRIVYQSLTRINKSIEDGDFFENDVLNNAIA
                     HVNSHDSALHIFGLLSDGGVHSHYKHLFALLELAKKQGVEKVYVHAFLDGRDVDQKSA
                     LKYIEETEAKFNELGIGQFASVSGRYYAMDRDKRWEREEKAYNAIRNFDAPTYATAKE
                     GVEASYNEGLTDEFVVPFIVENQNDGVNDGDAVIFYNFRPDRAAQLSEIFANRAFEGF
                     KVEQVKDLFYATFTKYNDNIDAAIVFEKVDLNNTIGEIAQNNNLTQLRIAETEKYPHV
                     TYFMSGGRNEEFKGERRRLIDSPKVATYDLKPEMSAYEVKDALLEELNKGDLDLIILN
                     FANPDMVGHSGMLEPTIKAIEAVDECLGEVVDKILDMDGYAIITADHGNSDQVLTDDD
                     QPMTTHTTNPVPVIVTKEGVTLRETGRLGDLAPTLLDLLNVEQPEDMTGESLIKH"
     gene            14910..16214
                     /gene="eno"
                     /locus_tag="O7798_000910"
     CDS             14910..16214
                     /gene="eno"
                     /locus_tag="O7798_000910"
                     /EC_number="4.2.1.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017466665.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphopyruvate hydratase"
                     /protein_id="HDC2863179.1"
                     /translation="MPIITDVYAREVLDSRGNPTVEVEVLTESGAFGRALVPSGASTG
                     EHEAVELRDGDKSRYLGKGVTKAVENVNEIIAPEIIEGEFSVLDQVSIDKMMIALDGT
                     PNKGKLGANAILGVSIAVARAAADLLGQPLYKYLGGFNGKQLPVPMMNIVNGGSHSDA
                     PIAFQEFMILPVGATTFKESLRWGTEIFHNLKSILSKRGLETAVGDEGGFAPKFEGTE
                     DAVETIIQAIEAAGYKPGEEVFLGFDCASSEFYENGVYDYSKFEGEHGAKRTAAEQVD
                     YLEQLVDKYPIITIEDGMDENDWDGWKQLTERIGDRVQLVGDDLFVTNTEILAKGIEN
                     GIGNSILIKVNQIGTLTETFDAIEMAQKAGYTAVVSHRSGETEDTTIADIAVATNAGQ
                     IKTGSLSRTDRIAKYNQLLRIEDELFETAKYDGIKSFYNLDK"
     gene            16554..17012
                     /locus_tag="O7798_000911"
     CDS             16554..17012
                     /locus_tag="O7798_000911"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499356.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDC2863180.1"
                     /translation="MADRTNKEIKTGRFIATASIVFSILLIIHYFVSLDNATAKALLN
                     LTNQNTSDKAIDYILNSFRFTGIMYILAYLAGFITFWNRHTYVWWFMFAVYVSNSLFT
                     LINLSITIQAIKAAHGAYLTLPILIVIIGSVALAIYMLVVSIKRKSTFNR"
     gene            17079..17312
                     /gene="secG"
                     /locus_tag="O7798_000912"
     CDS             17079..17312
                     /gene="secG"
                     /locus_tag="O7798_000912"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499357.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="preprotein translocase subunit SecG"
                     /protein_id="HDC2863181.1"
                     /translation="MHTFLIVLLIIDCIALITVVLLQEGKSSGLSGAISGGAEQLFGK
                     QKQRGVDLFLNRLTIILSILFFVLMICISYLGM"
     gene            17428..18168
                     /locus_tag="O7798_000913"
     CDS             17428..18168
                     /locus_tag="O7798_000913"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499358.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxylesterase"
                     /protein_id="HDC2863182.1"
                     /translation="MQIKLPKPFFFEEGKRAVLLLHGFTGNSSDVRQLGRFLQKKGYT
                     SYAPQYEGHAAPPDEILKSSPFVWFKDALDGYDYLVEQGYDEIVVAGLSLGGDFALKL
                     SLNRDVKGIVTMCAPMGGKTEGAIYEGFLEYARNFKKYEGKDQETIDNEMDHFKPTET
                     LKELSEALDTIKEQVDEVLDPILVIQAENDNMIDPQSANYIYDHVDSDDKNIKWYSES
                     GHVITIDKEKEQVFEDIYQFLESLDWSE"
     gene            18202..20574
                     /gene="rnr"
                     /locus_tag="O7798_000914"
     CDS             18202..20574
                     /gene="rnr"
                     /locus_tag="O7798_000914"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499359.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease R"
                     /protein_id="HDC2863183.1"
                     /translation="MNLKQSIEEIINQPEYEPMSVSDFQDALGLSSADSFRDLIKVLV
                     ELEQSGLIERTKTDRYQKKHSYRGQSKLIKGTLSQNKKGFAFLRPEDEDMEDIFIPPT
                     KINRALDGDTVIVEIHQSKGEHKGKIEGEVKSIEKHSVTQVVGTYSEARHFGFVIPDD
                     KRIMQDIFIPKGQSLGAVDGHKVLVQITKYADGSDNPEGHISAILGHKNDPGVDILSI
                     IYQHGIEIEFPDEVLQEAEAVPDHIENTEIKGRHDLRDELTITIDGADAKDLDDAISV
                     KKLANGNTQLTVSIADVSYYVTEGSALDKEAYDRATSVYLVDRVIPMIPHRLSNGICS
                     LNPNVDRLTLSCRMEIDASGRVVKHEIFDSVIHSDYRMTYDAVNQIITEKDPNIREQY
                     NEITPMLDLAQDLSNRLIQMRKRRGEIDFDISEAKVLVNEDGIPTDVQLRQRGEGERL
                     IESFMLIANETVAEHFSKLDVPFIYRVHEQPKSDRLRQFFDFITNFGIMIKGTGEDIH
                     PTTLQKVQEEVEGRPEQMVISTMMLRSMQQAHYDDVNLGHFGLSAEYYTHFTSPIRRY
                     PDLTVHRLIRKYLIEKSMDNKEVKRWEDKLPELAEHTSKRERRAIEAERDTDELKKAE
                     YMIQHIGDEFEGIVSSVANFGMFIELPNTIEGMVHIANMTDDYYRFEERQMALIGERQ
                     AKVFRIGDTVKVKVTHVDVDERLIDFQIVGMPLPKNDRSQRPARGKTIQAKTRGKSLD
                     KSKSDDKGRKKKGKQRKGKNQRNNDKSGNSKHKPFYKDKSVKKKARRKKK"
     gene            20596..21060
                     /gene="smpB"
                     /locus_tag="O7798_000915"
     CDS             20596..21060
                     /gene="smpB"
                     /locus_tag="O7798_000915"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499360.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SsrA-binding protein SmpB"
                     /protein_id="HDC2863184.1"
                     /translation="MAKKKSPGTLAENRKARHDYNIEDTIEAGIVLQGTEIKSIRRGS
                     ANLKDSYAQVKNGEMYLNNMHIAPYEEGNRFNHDPLRSRKLLLHKREIIKLGDQTREI
                     GYSIVPLKLYLKHGHCKVLLGVARGKKKYDKRQALKEKAVKRDVARDMKARY"
     gene            21151..21512
                     /gene="ssrA"
                     /locus_tag="O7798_000916"
     tmRNA           21151..21512
                     /gene="ssrA"
                     /locus_tag="O7798_000916"
                     /product="transfer-messenger RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00023"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00023"
     gene            complement(21624..22730)
                     /locus_tag="O7798_000917"
     CDS             complement(21624..22730)
                     /locus_tag="O7798_000917"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015728767.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="site-specific integrase"
                     /protein_id="HDC2863185.1"
                     /translation="MSYNLNLSHNIYKDAKLGTYYFRITYYDKSNTRKYITRKGFKQR
                     KDAVKKCNEMMDELEGVGHLNRLSFDKLVEEYIDWYSARRKTSSVKALKTHTNNHLLP
                     YFKSMDVFKMTTQDVMKFQNKKLKEGHSGDYLKKMHVYLVSLLNHAMKFHELKQNVAS
                     LVGNFEIESQKRLNYWTLEQFNQFYGALVTQQQKLFFKLLFYSGARKGEIRALTWRDI
                     NFDDDFIHINKTDYHGEVTAPKTKSAIRDIYLPTHMMGDIKNYLNWYKENNIFKDDYV
                     LFGTFYKAYSESTIDRWFTNALKVLDEQLPNGQNFPRIVIHELRHSHASMLVNLGASV
                     MIIAQRLGHSDTTEVYNRYGHLYPSTQKEIVKYL"
     gene            complement(22736..23383)
                     /locus_tag="O7798_000918"
     CDS             complement(22736..23383)
                     /locus_tag="O7798_000918"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017636857.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HDC2863186.1"
                     /translation="MSQQSILANNIKKIRKELGLTMEEFGEKFTHKAHKSIVSKWENG
                     LTKPSNERLKEIAKLGNISVHQLIYGDFLGLLESIANEEIKFILDTNMCANNSFLANE
                     LSSSVSRFIFSYYERGKENFNENLFRKLLQHYLQLELDLGNRDLESLTYFAYQRTINA
                     QELVVDYYEDSKAKEFLKDESIDEFLTTISNKYFDLLEYIDDYRVKHDLEKISEE"
BASE COUNT         8311 a         3476 c         4497 g         7290 t
ORIGIN      
        1 cataatgatt aataatgagg aggcgttaat aaaatgactg aaatagattt tgatatagca
       61 attatcggtg caggtccagc tggtatgact gctgcagtat acgcatcacg tgctaattta
      121 aaaacagtta tgattgaaag aggtattcca ggcggtcaaa tggctaatac agaagaagta
      181 gagaacttcc ctggtttcga aatgattaca ggtccagatt tatctacaaa aatgtttgaa
      241 cacgctaaaa agtttggtgc agtttatcaa tatggagata ttaaatctgt agaagataaa
      301 ggcgaatata aagtgattaa ctttggtaat aaagaattaa cagcgaaagc ggttattatt
      361 gctacaggtg cagaatacaa gaaaattggt gttccgggtg aacaagaact tggtggacgc
      421 ggtgtaagtt attgtgcagt atgtgatggt gcattcttta aaaataaacg cctattcgtt
      481 atcggtggtg gtgattcagc agtagaagag ggaacattct taactaaatt tgctgacaaa
      541 gtaacaatcg ttcaccgtcg tgatgagtta cgtgcacagc gtattttaca agatagagca
      601 ttcaaaaatg ataaaatcga ctttatttgg agtcatactt tgaaatcaat taatgaaaaa
      661 gacggcaaag tgggttctgt gacattaacg tctacaaaag atggttcaga agaaacacac
      721 gaggctgatg gtgtattcat ctatattggt atgaaaccat taacagcgcc atttaaagac
      781 ttaggtatta caaatgatgt tggttatatt gtaacaaaag atgatatgac aacatcagta
      841 ccaggtattt ttgcagcagg agatgttcgc gacaaaggtt tacgccaaat tgtcactgct
      901 actggcgatg gtagtattgc agcgcaaagt gcagcggaat atattgaaca tttaaacgat
      961 caagcttaat tcgaagtcga attaagatgt tgagctgtaa attatttgga tatttatttt
     1021 aatagtgtca tcacagcgtt aaaataatgt cttactttta aattaaagca aattatatag
     1081 aaaactagaa cttagtacgt atcatttgtg cgtttcaatg agttctagtt tttttatatg
     1141 ttatattaaa cttataactt tatgggagtg ggacagaaat gataaagagc cactaatgat
     1201 ttattatgta gtggttctta aacattagcc acagctaatg tgtacttaaa aataggaata
     1261 catgagtaaa actcatgcat aagaaatact aatttctata gaaaaagtat tactttatcg
     1321 ttgtcccacc ccaacttgca cattattgta agctgacttt ccgccagctt ctgtgttggg
     1381 gccccgccaa cttgcattgt ctgtagaaat tgggaatcca atttctctat gttggggccc
     1441 acaccccaac tcgcattgcc tgtagaattt cttttcgaaa ttctctgtgt tggggcccct
     1501 gactagagtt gaaaaaagct tgttgcaagc gcattttcat tcagtcaact actagcaata
     1561 taatattata gaccctagga cattgattta tgtcccaagc tccttttaaa tgatgtatat
     1621 ttttagaaat ttaatctaga catagttgga aataaatata aaacatcgtt gcttaatttt
     1681 gtcatagaac atttaaatta acatcatgaa attcgttttg gcggtgaaaa aataatggat
     1741 aataatgaaa aagaaaaaag taaaagtgaa ctattagttg taacaggttt atctggcgca
     1801 ggtaaatctt tggttattca atgtttagaa gacatgggat atttttgtgt agataatcta
     1861 ccaccagtgt tattgcctaa atttgtagag ttgatggaac aaggaaatcc atccttaaga
     1921 aaagtggcaa ttgcaattga tttaagaggt aaggaactat ttaattcatt agttgcagta
     1981 gtggataaag tcaaaagtga aagtgacgtc atcattgatg ttatgttttt agaagcaagt
     2041 actgaaaaat taatttcaag atataaggaa acgcgtcgtg cacatccttt gatggaacaa
     2101 ggtaaaagat cgttaatcaa tgcaattaat gatgagcgag agcatttgtc tcaaattaga
     2161 agtatagcta attttgttat agatactaca aagttatcac ctaaagaatt aaaagaacgc
     2221 attcgtcgat actatgaaga tgaagagttt gaaactttta caattaatgt cacaagtttc
     2281 ggttttaaac atgggattca gatggatgca gatttagtat ttgatgtacg atttttacca
     2341 aatccatatt atgtagtaga tttaagacct ttaacaggat tagataaaga cgtttataat
     2401 tatgttatga aatggaaaga gacggagatt ttctttgaaa aattaactga tttgttagat
     2461 tttatgatac ccgggtataa aaaagaaggg aaatctcaat tagtaattgc catcggttgt
     2521 acgggtggac aacatcgatc tgtagcatta gcagaacgac taggtaatta tctaaatgaa
     2581 gtatttgaat ataatgttta tgtgcatcat agggacgcac atattgaaag tggcgagaaa
     2641 aaatgagaca aataaaagtt gtacttatcg gtggtggcac tggcttatca gttatggcta
     2701 ggggattaag agaattccca attgatatta cggcgattgt aacagttgct gataatggtg
     2761 ggagtacagg gaaaatcaga gatgaaatgg atataccagc accaggagac atcagaaatg
     2821 tgattgcagc tttaagtgat tctgagtcag ttttaagcca actttttcag tatcgctttg
     2881 aagaaaatca aattagcggt cactcattag gtaatttatt aatcgcaggt atgactaata
     2941 ttacgaatga tttcggacat gccattaaag cattaagtaa aattttaaat attaaaggta
     3001 gagtcattcc atctacaaat acaagtgtgc aattaaatgc tgttatggaa gatggagaaa
     3061 ttgtttttgg agaaacaaat attcctaaaa aacataaaaa aattgatcgt gtgtttttag
     3121 aacctaacga tgtgcaacca atggaagaag caatcgatgc tttaagggaa gcagatttaa
     3181 tcgttcttgg accagggtca ttatatacga gcgttatttc taacttatgt gtgaatggta
     3241 tttcagatgc gttaattcat tctgatgcgc ctaagctata tgtttctaat gtgatgacgc
     3301 aacctgggga aacagatggt tatagcgtga aagatcatat cgatgcgatt catagacaag
     3361 ctggacaacc gtttattgat tatgtcattt gtagtacaca aactttcaat gctcaagttt
     3421 tgaaaaaata tgaagaaaaa cattctaaac cagttgaagt taataaggct gaacttgaaa
     3481 aagaaagcat aaatgtaaaa acatcttcaa atttagttga aatttctgaa aatcatttag
     3541 taagacataa tactaaagtg ttatcgacaa tgatttatga catagcttta gaattaatta
     3601 gtactattcc tttcgtacca agtgataaac gtaaataata tagaacgtaa tcatattatg
     3661 atatgataat agagctgtga aaaaaatgaa aatagacagt ggttctaagg tgaatcatgt
     3721 tttaaataag aaaggaatga ctgtacgatg agctttgcat cagaaatgaa aaatgaatta
     3781 actagaatag acgtcgatga aatgaatgca aaagcagagc tcagtgcact gattcgaatg
     3841 aatggtgcac ttagtctttc aaatcaacaa tttgttataa atgttcaaac ggaaaatgca
     3901 acaacggcaa gacgtattta ttcgttgatt aaacgtgtct ttaatgtgga agttgaaata
     3961 ttagtccgta aaaaaatgaa acttaaaaaa aataatattt atatttgtcg tacaaagatg
     4021 aaagcgaaag aaattcttga tgaattagga attttaaaag acggcatttt tacgcatgaa
     4081 attgatcatt caatgattca agatgacgaa atgagacgca gttacttgag aggagctttt
     4141 ctggcaggtg gctcagtgaa taaccctgaa acatcttcgt accatttgga aattttttct
     4201 caaaatgaga gtcatgcaga aggcttaacg aaactaatga atagttatga gttgaatgcc
     4261 aaacatttag agcgaaaaaa aggaagtatt acgtatttaa aagaagcgga aaagatttcg
     4321 gattttctta gtttgatagg tggctatcaa gcgttattaa aatttgaaga cgtacgtatt
     4381 gtaagagata tgcgtaattc tgttaaccga ctcgttaatt gtgaaacggc caatctaaat
     4441 aaaacagtta gtgctgcgat gaaacaagtt gagagcatta aattgattga taaagaaatt
     4501 ggtattgaaa atttaccaga caggttgaga gagattgcta gaattcgagt agaacatcaa
     4561 gaaatttcgt tgaaagagct tggagaaatg gtatcaactg gtccaatttc aaaatcaggt
     4621 gtaaatcacc gattaagaaa actgaatgat ttagccgata agattagaaa tggtgaacaa
     4681 atagaattat aagtaagaag gtgtttttgg tagtgaatta tcaaaaacac ttttttatga
     4741 ttaaaaagtg tttaatgaat aatagtcgac taactattaa attgagctgg aaagtttaat
     4801 gaaggaaatt caataaccaa gtgatgccta attttctcat taaatagcat catatgtatc
     4861 aatttggtca taagaaaata tgaatgtgat aattaattga gtccctgaaa gtccctgatc
     4921 atagacaaaa acaaaatcag cataaataag aatcccgaca ttgcgggatt ctctgtattg
     4981 aaaagtattg tattttatta aaacagcctc cttgaaggga attgaacccc tatcttaaga
     5041 accggaatct tacgtgttat ccattacacc acaaggagca aatatgtaat catatctctg
     5101 tactatgaga agtaaaataa gtacaatcta aaatagatat tatcagttta caaaggaaag
     5161 agaaaagcgt caaacaatgt aactatttaa agtcaaagtg tttgaccaaa tttgacttaa
     5221 tatgtaaaat aatgagtaac agttattaca aggaggaaat atagatgaat ttaattccta
     5281 cagttattga aacaacaaac cgcggtgaac gtgcatatga tatatactca cgtttattaa
     5341 aagaccgtat tattatgtta ggttcacaaa ttgatgacaa cgtagcaaat tcaatcgtat
     5401 cacagttatt attcttacaa gcgcaagact cagagaaaga tatttattta tacattaatt
     5461 caccaggtgg aagtgtaaca gctggttttg cgatttatga tacaattcaa cacattaaac
     5521 ctgatgttca aacaatttgt atcggtatgg ctgcatcaat gggatcattc ttattagcag
     5581 ctggtgcaaa aggtaaacgt ttcgcgttac caaatgcaga agtaatgatt caccaaccat
     5641 taggtggtgc tcaaggacaa gcaactgaaa tcgaaattgc tgcaaatcac attttaaaaa
     5701 cacgtgaaaa attaaaccgc attttatcag agcgtactgg tcaaagtatt gaaaaaatac
     5761 aaaaagacac agatcgtgat aacttcttaa ctgcagaaga agctaaagaa tatggcttaa
     5821 ttgatgaagt gatggtacct gaaacaaaat aattcaaagt aaagagtaga ctaagctgtc
     5881 tgctcttttt gtatgagtaa accaaggtgt caataatttg tttactatac tttgagcgga
     5941 aatatgattg aatgaagcta gttgaaccgt aactatatga aatgttccct tcaaagtaga
     6001 cattgaaagg aacatttcaa tcctttgttt gtaagtcgct ctagacatta catttagtac
     6061 atatgttgtt tctaatgctc attaatggta ttgattattc tttaattaaa tcttcaagtg
     6121 ccatttttaa attactatat ttaaattgga atcccaatgc ttgaatttta ttaggtaata
     6181 ctttttgagt atccaatact actgttgaca tttgaccaag tatgagacgc attgcaagac
     6241 ttggtgccca agtttcatga ggcttatgca tagctcttgc taaagtgtag ccaaataaat
     6301 tttgacgttc aggtataggt gcagttaaat taaacggacc actagctgac tcgttattta
     6361 ttaaaaataa aatagcttga attaaatcat tgatatgaat ccatgaatac cattgttgac
     6421 cagaacctaa tttaccacca atgtaatatt cgtatggtag tttcattgtt tgtaacgcac
     6481 cgccttcatt cgataaaatt ataccgaaac gaccgatgac aactcgtgta cctaattgtt
     6541 caaattgttg tgcgaaacgt tcccattgat acacaatatc tgataagaaa tcaaaaggta
     6601 aagttttata aacttctgtg taactcataa ataaatcagg aggatagtaa ccagtggcac
     6661 tagcattaaa taaagcttta ggtgctttat tacgtgattt aaacaattca tataaagctt
     6721 gcgtagattg aattctactt agcattagcg tttgtttata ttccggtgtc catcgtttat
     6781 tcaatgtagc acctgctaag ttgatgacca catcgatatt ttgaggaact ttgtgttccc
     6841 acccagattt agcccagttg acatatgaaa ttttcttatc atttgaaatt tggtcgtgtc
     6901 gcgttaatat cgtgatatgt gaatctgatt ttttaatttc attaactaat tgagatccaa
     6961 ccataccagt cccaccagta attaagtatt gtttcattat cattcacccc atgtaatttt
     7021 gtatttagtt actatttaat aatcattatt gttgttcaaa ggttatacat tatttagaca
     7081 ataatatgtc aataactttt tttgaattgt attttaataa aaatgatata agttataata
     7141 aaggtgtacc ttcgataacg aataaacatc tcttaaaagt atgtgtaaaa cgctgcatga
     7201 tacaaacgaa ggtaaaaatt tgactccctt tagtagtgga cccgtacgtt aatcgtgcgg
     7261 gtcgttttta tttatttctt attcccatta tacatcaatt taaagcatta attttttaaa
     7321 caaatttaag aatacatagt aatataacaa tctaaacata aaaactttta acacaacact
     7381 taaaccaatg ctttaatttt caatacgtag ctataatttg ttgtaaaatc aaaaaggtta
     7441 aaatgttaat tttcaaaaaa aggctcaaaa tatgtttgat ttagttatta aatgttaaga
     7501 tatataagac tactatttct ttgtaaaaat gaatccgatt tacgagtgag taatagtgaa
     7561 ggcagtttta agttgaagaa ggcaaaaaga gtaaatgttt attaatattt gtagaaacta
     7621 ggtaagcaaa ttagttgtga aaatgttaat ggttgcgtga taatttctat atttaaatta
     7681 gtttgaagtg agggagagta tgtcgaatca aaattacgac tacaataaaa atgaagatgg
     7741 aagtaagaag aaaatgagta caacagcgaa agtagttagc attgcgacgg tattgctatt
     7801 actcggagga ttagtatttg caatttttgc atatgtagat cattcgaata aagctaaaga
     7861 acgtatgttg aacgaacaaa agcaggaaca aaaagaaaag cgtcaaaaag aaaatgcaga
     7921 aaaagagaga aagaaaaagc aacaagagga aaaagagcag aatgagctag attcacaagc
     7981 aaaccaatat cagcaattgc cacagcagaa tcaatatcaa tatgtgccac ctcagcaaca
     8041 agcacctaca aagcaacgtc ctgctaaaga agagaatgat gataaagcat caaaggatga
     8101 gtcgaaagat aaggatgaca aagcatctca agataaatca gatgataatc agaagaaaac
     8161 tgatgataat aaacaaccag ctcagcctaa accacagccg caacaaccaa caccaaagcc
     8221 aaataataat caacaaaaca atcaatcaaa tcagcaagca aaaccacaag caccacaaca
     8281 aaatagccaa tcaacaacaa ataaacaaaa taatgctaat gataagtagt atttagtcaa
     8341 acaaaaatga accagtatga cagacaacac aattaattag gttgtctcga atattggttc
     8401 ttatttttat aattgttaat taggggagag atgatactta aatagttagt tgtttatttt
     8461 acggatagtg aaatttattt tgagtgaggt gggacagaaa tgatattttc gcaaaattta
     8521 tttcgtcgtc ccaccccaac ttccattgcc tgtagaaatt ggaaatccaa tttctctatg
     8581 ttggggcccc tgactttaat tgaaaaaagc ttgttacaag tgcattttcg ttcggttaac
     8641 tactactaat gtgacttttt ggattctaga gcattgattt atgtcctagt ctcaaataat
     8701 aagcaaatga ttatcgagtc agtataaggg tatacatttg actacagcga ataaaataaa
     8761 acgttttgtt gaataacaaa tcgaaaatat attgcaagcg ctttatcaaa ttatttagaa
     8821 aatttaagtt ttatgcttgc aatttttgaa atagaatagt actattgcaa gtgtaaagag
     8881 gttaattttt gtcccacgcg ggacttaaaa aggcaaccac tggttgtgac atatccttat
     8941 ttacatttat aaatataagg aggaggtagt agtgaaagac ttattgcaag cacagcaaaa
     9001 gcttataccg gatctcatag ataaaatgta taaacgtttt tctattctta ctactatctc
     9061 aaaaaatcag cctgtcggac gtcgaagttt aagcgaacat atggatatga ctgaacgtgt
     9121 actgcgttct gaaacagata tgcttaagaa acaagatttg ataaaagtta agcctaccgg
     9181 aatggaaatt acagctgaag gtgagcaact gatttcgcaa ttgaaaggtt actttgatat
     9241 ctatgcagat gataatcgtc tgtcagaagg tattaagaat aaatttcaaa ttaaggaagt
     9301 tcatgttgtt cctggtgatg ctgataatag tcaatctgtt aaaacagaat taggtagaca
     9361 agcaggtcaa ttacttgaag gcatattaca agaagacgcg atagttgctg taactggcgg
     9421 atccacgatg gcatgtgtta gtgaagcaat tcatttatta ccatataatg tattcttcgt
     9481 accagccaga ggtggactag gcgaaaatgt tgtctttcag gcaaacacaa ttgcagccag
     9541 tatggcacaa caagctggcg gttattatac gacgatgtat gtacctgata atgtcagtga
     9601 aacaacatat aatacattgt tgttagagcc atcagtcata aacactttag acaaaattaa
     9661 acaagcaaac gttatattac acggcattgg tgatgcgctg aagatggcgc atcgacgtca
     9721 atcacctgaa aaggtcattg aacaacttca acatcatcaa gctgtcggag aggcatttgg
     9781 ttattatttt gatacacaag gtcaaattgt ccataaggtt aaaacaattg gacttcaatt
     9841 agaagacctt gaatcaaaag actttatttt tgcagttgca ggaggcaaat cgaaaggtga
     9901 agcaattaaa gcatacttga cgattgcacc caagaataca gtgttaatca ctgatgaagc
     9961 cgcagcaaag ataatacttg aataagagat aaaaagttta atacttttta aatatcattt
    10021 taaaggaggc cattataatg gcagtaaaag tagcaattaa tggttttggt agaattggtc
    10081 gtttagcatt cagaagaatt caagaagtag aaggtcttga agttgtagca gtaaacgact
    10141 taacagatga cgacatgtta gcgcatttat taaaatatga cactatgcaa ggtcgtttca
    10201 caggtgaagt agaggtagtt gatggtggtt tccgcgtaaa tggtaaagaa gttaaatcat
    10261 tcagtgaacc agatgcaagc aaattacctt ggaaagactt aaatatcgat gtagtattag
    10321 aatgtactgg tttctacact gataaagata aagcacaagc tcatattgaa gcaggcgcta
    10381 aaaaagtatt aatctcagca ccagctactg gtgacttaaa aacaatcgta ttcaacacta
    10441 accaccaaga gttagacggt tctgaaacag ttgtttcagg tgcttcatgt actacaaact
    10501 cattagcacc agttgctaaa gttttaaacg atgactttgg tttagttgaa ggtttaatga
    10561 ctacaattca cgcttacaca ggtgatcaaa atacacaaga cgcacctcac agaaaaggtg
    10621 acaaacgtcg tgctcgtgca gcggcagaaa acatcatccc taactcaaca ggtgctgcta
    10681 aagctatcgg taaagttatt cctgaaatcg atggtaaatt agatggtggt gcacaacgtg
    10741 ttcctgtagc tacaggttca ttaactgaat taacagtagt attagaaaaa caagacgtaa
    10801 cagttgaaca agttaacgaa gctatgaaaa atgcttcaaa cgaatcattc ggttacactg
    10861 aagacgaaat cgtttcttca gacgttgtag gtatgactta cggttcatta ttcgacgcta
    10921 cacaaactcg tgtaatgtca gttggcgacc gtcaattagt taaagttgca gcttggtatg
    10981 ataacgaaat gtcatatact gcacaattag ttcgtacatt agcatactta gctgaacttt
    11041 ctaaataatt ttagtatagt ttttattcaa atacgctagt gctcagaact atttagcatt
    11101 aattaaagct tatgagtaag cggggagcac aaacgcttct ccgcttattt ttatataaaa
    11161 tttcctaatt acaaggagga aacaccatgg ctaaaaaaat tgtttctgat ttagatctta
    11221 aaggtaaaac agtcctagta cgtgctgatt ttaacgtacc tttaaaagac ggtgaaatta
    11281 ctaatgacaa ccgtatcgtt caagctttac ctacaattca atacatcatc gaacaaggtg
    11341 gtaaaatcgt actattttca catttaggta aagtgaaaga agaaagtgat aaagcaaaat
    11401 taactttacg tccagttgct gaagacttat ctaagaaatt agataaagaa gttgttttcg
    11461 taccagaaac acgcggcgaa aaacttgaag ctgctattaa agaccttaaa gaaggcgacg
    11521 tattattagt tgaaaataca cgttatgaag atttagacgg taaaaaagaa tctaaaaatg
    11581 atccagaatt aggtaaatac tgggcatctt taggtgatgt gtttgtaaat gatgcttttg
    11641 gtactgcgca tcgtgagcat gcatctaatg ttggtatttc tacacattta gaaactgcag
    11701 ctggattctt aatggataaa gaaattaagt ttattggcgg cgtagttaac gatccacata
    11761 aaccagttgt tgctatttta ggtggagcaa aagtatctga caaaattaat gtcatcaaaa
    11821 acttagttaa catagctgat aaaattatca tcggcggagg tatggcttat actttcttaa
    11881 aagcgcaagg taaagaaatt ggtatttcat tattagaaga agataaaatc gacttcgcaa
    11941 aagatttatt agaaaaacat ggtgataaaa ttgtattacc agtagacact aaagttgcta
    12001 aagaattttc taatgatgcc aaaatcactg tagtaccatc tgattcaatt ccagcagacc
    12061 aagaaggtat ggatattgga ccaaacactg taaaattatt tgcagatgaa ttagaaggtg
    12121 cgcacactgt tgtatggaat ggacctatgg gtgtattcga gttcagtaac tttgcacaag
    12181 gtacaattgg tgtatgtaaa gcaattgcaa accttaaaga tgcaattacg attatcggtg
    12241 gcggtgattc agctgcagca gcaatctctt taggttttga aaatgacttc actcatattt
    12301 caactggtgg cggcgcgtca ttagagtacc tagaaggtaa agaattgcct ggtatcaaag
    12361 caatcaataa taaataataa agtgatagtt taaagtgatg tggcatgttt gtttaacatt
    12421 gttacgggaa aacagtcaca agatgacatc gtgtttcatc acttttcaaa aatatttaca
    12481 aaacaaggag tgtctttaat gagaacacca attatagctg gtaactggaa aatgaacaaa
    12541 acagtacaag aagcaaaaga cttcgtcaat gcattaccaa cattaccaga ttcaaaagaa
    12601 gtagaatcag taatttgtgc accagcaatt caattagatg cattaactac tgcagttaaa
    12661 gaaggaaaag cacaaggttt agaaatcggt gctcaaaata cgtatttcga agataatggt
    12721 gcgttcacag gtgaaacgtc tccagttgca ttagcagatt taggcgttaa atacgttgtt
    12781 atcggtcatt ctgaacgtcg tgaattattc cacgaaacag atgaagaaat taacaaaaaa
    12841 gcgcacgcta ttttcaaaca tggaatgact ccaattatat gtgttggtga aacagacgaa
    12901 gagcgtgaaa gtggtaaagc taacgatgtt gtaggtgagc aagttaagaa agctgttgca
    12961 ggtttatctg aagatcaact taaatcagtt gtaattgctt atgaaccaat ctgggcaatc
    13021 ggaactggta aatcatcaac atctgaagat gcaaatgaaa tgtgtgcatt tgtacgtcaa
    13081 actattgctg acttatcaag caaagaagta tcagaagcaa ctcgtattca atatggtggt
    13141 agtgttaaac ctaacaacat taaagaatac atggcacaaa ctgatattga tggggcatta
    13201 gtaggtggcg catcacttaa agttgaagat ttcgtacaat tgttagaagg tgcaaaataa
    13261 tcatggctaa gaaaccaact gcgttaatta ttttagatgg ttttgcgaac cgcgaaagcg
    13321 aacatggtaa tgcggtaaaa ttagcaaaca agcctaattt tgatcgttat tacaacaaat
    13381 atccaacgac tcaaatcgaa gcgagtggct tagatgttgg actacctgaa ggacaaatgg
    13441 gtaactcaga agttggtcat atgaatatcg gtgcaggacg tatcgtttat caaagtttaa
    13501 ctcgaatcaa taaatcaatt gaagacggtg atttctttga aaatgatgtt ttaaataatg
    13561 caattgcaca cgtgaattca catgattcag cgttacacat ctttggttta ttgtctgacg
    13621 gtggtgtaca cagtcattac aaacatttat ttgctttgtt agaacttgct aaaaaacaag
    13681 gtgttgaaaa agtttacgta cacgcatttt tagatggccg tgacgtagat caaaaatccg
    13741 ctttgaaata catcgaagag actgaagcta aattcaatga attaggcatt ggtcaatttg
    13801 catctgtgtc tggtcgttat tatgcaatgg atcgtgacaa acgttgggaa cgtgaagaaa
    13861 aagcttacaa tgctattcgt aattttgatg ccccaactta tgcaactgcc aaagaaggtg
    13921 tagaagcaag ctataatgag ggcttaactg acgaattcgt agtaccattc atcgttgaga
    13981 atcaaaatga cggtgttaat gatggagatg cagtgatctt ctataatttc cgacctgata
    14041 gagcagcgca attatcggaa atttttgcga acagagcatt cgaaggcttt aaagttgaac
    14101 aagttaaaga cttattctat gcaacattca ctaagtataa tgacaatatc gatgcggcta
    14161 tcgtcttcga aaaagttgat ttaaataata caattggtga aattgcacaa aataacaatt
    14221 taactcaatt acgtattgca gaaactgaaa aataccctca cgttacttac tttatgagtg
    14281 gtggacgtaa cgaggaattt aaaggtgaac gccgtcgttt aattgattca cctaaagttg
    14341 caacgtatga cttgaaacca gaaatgagtg cttatgaagt taaagatgca ttattagaag
    14401 agttaaataa aggtgacttg gacttaatta ttttaaactt tgctaaccct gatatggttg
    14461 gacatagtgg tatgcttgag ccgacaatca aagcaatcga agcggttgat gaatgtttag
    14521 gagaagtggt tgataagatt ttagacatgg acggttatgc aattattact gctgaccatg
    14581 gtaactctga tcaagtattg acggatgatg atcaaccaat gactacgcat acaacgaacc
    14641 cagtaccagt gattgtaaca aaagaaggcg ttacacttag agaaactggt cgcttaggtg
    14701 acttagcacc tacattatta gatttattaa atgtagaaca acctgaagat atgacaggtg
    14761 aatctttaat taaacactaa tattgtaaaa gatgttaagt aaacgcttaa tgacacttat
    14821 tttttgaaaa taatagtaat atcattttgt taaatgaaag aataaagcta taataattat
    14881 agaataacta tttaaaggag attataaaca tgccaattat tacagatgtt tacgctcgcg
    14941 aagtcttaga ctctcgtggt aacccaactg ttgaagtaga agtattaact gaaagtggcg
    15001 catttggtcg tgcattagta ccatcaggtg cttcaactgg tgaacacgaa gctgttgaat
    15061 tacgtgatgg agacaaatca cgttatttag gtaaaggtgt tactaaagca gttgaaaacg
    15121 ttaatgaaat catcgcacca gaaattattg aaggtgaatt ttcagtatta gatcaagtat
    15181 ctattgataa aatgatgatc gcattagacg gtactccaaa caaaggtaaa ttaggtgcaa
    15241 atgctatttt aggtgtatct atcgcagtag cacgtgcagc agctgactta ttaggtcaac
    15301 cactttacaa atatttaggt ggatttaatg gtaagcagtt accagtacca atgatgaaca
    15361 tcgttaatgg tggttctcac tcagatgctc caattgcatt ccaagaattc atgattttac
    15421 ctgtaggtgc tacaacgttc aaagaatcat tacgttgggg tactgaaatt ttccacaact
    15481 taaaatcaat tttaagcaaa cgtggtttag aaactgcagt aggtgacgaa ggtggtttcg
    15541 ctcctaaatt tgaaggtact gaagatgctg ttgaaacaat tatccaagca atcgaagcag
    15601 ctggttacaa accaggtgaa gaagtattct taggatttga ctgtgcatca tcagaattct
    15661 atgaaaatgg tgtatatgac tacagtaagt tcgaaggcga acacggtgca aaacgtacag
    15721 ctgcagaaca agttgactac ttagaacaat tagtagacaa atatcctatc attacaattg
    15781 aagacggtat ggacgaaaac gactgggatg gttggaaaca acttacagaa cgtatcggtg
    15841 accgtgtaca attagtaggt gacgatttat tcgtaacaaa cactgaaatt ttagcaaaag
    15901 gtattgaaaa cggaattggt aactcaatct taattaaagt taaccaaatc ggtacattaa
    15961 ctgaaacatt tgatgcaatc gaaatggctc aaaaagctgg ttacacagca gtagtttctc
    16021 accgttcagg tgaaacagaa gatacaacaa ttgctgatat tgctgttgct acaaacgctg
    16081 gtcaaattaa aactggttca ttatcacgta ctgaccgtat tgctaaatac aatcaattat
    16141 tacgtatcga agatgaatta tttgaaactg ctaaatatga cggtatcaaa tcattctata
    16201 acttagataa ataattttct ttataatcaa atgctgacat aattttagtt gaggattatt
    16261 atgacggtat aaattaaata aagattttga gttcacgctt aaataagttc acgcttaaat
    16321 ttatagcctg ccacagagtt gagactgtgg taggtttttt attttgaagt attaatcata
    16381 acagactaat aatcatgagg taactaataa cacatattta acttgtattc ttaaactggt
    16441 ataataaatt tatgttgaaa tgaatattgt atgacagggt attcactttt attaaaaggt
    16501 aaaattaaat aaaggtttta tagaacgtat ttaaatatat gaggagtaaa caaatggctg
    16561 atagaacgaa taaagaaatt aaaacaggac gctttattgc aactgcatca atcgtattct
    16621 caatattatt gattattcat tactttgttt cgttggataa tgcgactgcc aaagcattac
    16681 ttaatttaac gaatcaaaac acttcagata aagcgattga ttacatttta aacagcttta
    16741 gattcactgg tattatgtat attttggctt atctagcagg cttcatcact ttttggaatc
    16801 gacatactta tgtgtggtgg tttatgtttg cagtttatgt atcaaatagt ttgtttacgt
    16861 tgattaattt atcaatcaca attcaagcaa taaaagctgc acacggtgcg tacttaacat
    16921 tgccaatttt aattgttatt ataggttcgg ttgcattagc gatttatatg cttgttgttt
    16981 ctatcaaacg taaaagtaca tttaatcgct agaaaattga ttttaacaat aaaaatatga
    17041 tatactactt gtcgtatata aggaacggag gacaatttat gcatacattt ttaatcgtat
    17101 tattaatcat tgattgtatt gcattaataa ctgttgtact actccaagaa ggtaaaagca
    17161 gtggactttc aggtgccatc agtggtggtg ctgagcagtt attcggtaaa caaaaacaac
    17221 gtggcgtcga tttattctta aatagattaa caattatttt atcaatatta ttttttgtac
    17281 ttatgatttg cataagttat cttggtatgt aaggtccggc gatgtaaatg tcgggctttt
    17341 ttatttataa ttaagaatgt aatagtttaa caataagcta tgtaaaatat atagcctagt
    17401 taagtatgca aagggagcgt tagatttatg cagataaaat taccaaaacc tttctttttt
    17461 gaggaaggta aacgtgccgt gttattacta catggtttta caggcaattc gtctgatgtt
    17521 cgtcaattag gtcgattttt acaaaagaaa ggttatacat catatgcacc gcaatatgaa
    17581 ggccacgcgg caccaccaga tgaaatactg aaatctagtc ctttcgtttg gtttaaagat
    17641 gcgttagatg gttatgatta tcttgttgaa caaggttatg atgaaattgt tgttgctggt
    17701 ctatcattag gtggggattt tgctttaaaa ttaagcttaa atagagatgt aaagggtatt
    17761 gtaacgatgt gtgctcctat gggtggcaaa actgaaggtg ccatttatga aggcttttta
    17821 gaatatgcac gcaattttaa aaagtatgaa ggtaaagatc aagagactat tgataatgaa
    17881 atggatcatt ttaaaccaac tgaaacttta aaagaactaa gtgaagcatt agatacgatt
    17941 aaagagcaag ttgatgaagt gttggatcct attttagtga ttcaagcaga aaacgacaat
    18001 atgattgatc cacaatccgc aaattatata tatgaccatg tagattctga tgacaaaaat
    18061 atcaagtggt acagtgaatc tggacatgtt attacgattg ataaagagaa agaacaagta
    18121 tttgaagata tttatcaatt tttagagtca ttagactggt cagaataaaa agagatttta
    18181 acattagaaa ggaggggcat aatgaattta aagcaatcta tagaagagat tattaatcaa
    18241 cctgaatatg aacctatgtc agtgtcagat tttcaagatg cattaggttt aagcagtgcc
    18301 gactcgttta gagatttaat taaggtgctt gtggagttag aacaatcagg attaatcgaa
    18361 cgtacaaaaa cagacagata ccaaaaaaag catagttata gaggtcaatc aaaattgata
    18421 aaaggaacgt taagtcaaaa taaaaaaggc tttgcattct taagacctga agatgaggat
    18481 atggaagata tatttattcc cccgacgaaa attaatcgtg ccttggatgg agatactgtt
    18541 attgtagaaa tccatcaatc aaaaggtgaa cataaaggta aaatcgaagg ggaagttaag
    18601 tcgattgaga agcattctgt aactcaagtt gttggtacgt atagtgaagc tagacatttt
    18661 ggctttgtta ttccggatga taaacgtatt atgcaagata ttttcattcc taaaggtcaa
    18721 agtttaggcg cagtcgatgg tcataaggta cttgtacaaa ttactaagta tgctgatggt
    18781 tcagataatc cagaaggaca tatttctgct attttaggac ataaaaatga tcctggcgta
    18841 gatattttat ctattatcta tcaacatggc atagaaattg aatttcctga tgaagtgtta
    18901 caagaagctg aagcagtacc tgatcatatt gaaaatactg aaattaaagg ccgtcatgat
    18961 ttacgtgatg aattgacaat cacaattgat ggtgctgatg ctaaagactt agatgacgca
    19021 attagtgtta aaaagttagc gaacggtaat acgcaattaa ctgtaagtat tgctgatgtc
    19081 agctattatg taacagaagg ttctgcattg gataaagagg catatgatag agcgacaagt
    19141 gtatatcttg ttgaccgtgt aattccaatg attccacatc gattaagtaa tggtatttgt
    19201 tcattgaatc ctaatgttga tcgtttaact ctaagctgtc gcatggaaat cgatgctagt
    19261 ggtcgcgttg ttaaacatga aatttttgat agtgttatac attctgatta tcgaatgacg
    19321 tatgatgcgg taaatcagat tattactgaa aaggatccta acattcgcga acaatataat
    19381 gaaattacgc ctatgctaga tttagcacaa gatttatcta atcgtttgat tcaaatgaga
    19441 aaacgacgtg gtgaaatcga ttttgatatt agtgaagcaa aagtattagt taacgaagac
    19501 ggtataccaa cagatgttca attaagacaa cgtggcgagg gtgaacgtct aattgaatca
    19561 tttatgttaa ttgcaaatga aacagttgct gaacatttta gtaagttaga tgtacctttt
    19621 atttaccgag tgcatgagca acctaaatca gatcgcttaa gacaattctt tgattttatt
    19681 acaaactttg gcatcatgat taagggtact ggcgaagata ttcatccaac aacacttcaa
    19741 aaggttcaag aagaagtaga aggtcgacct gaacaaatgg tcatttcaac aatgatgttg
    19801 cgttcaatgc aacaagcgca ttatgatgat gtgaacttgg gacattttgg cttatcagct
    19861 gaatattata cgcattttac atcaccaatt agacgttatc ctgatttaac agttcatcgt
    19921 ttaatccgta agtatttaat tgagaaatca atggataaca aagaagtgaa gcgttgggaa
    19981 gacaaattgc ctgagttagc tgaacatact tctaaacgtg aacgtcgtgc tattgaggca
    20041 gaacgtgata ctgatgaatt gaaaaaagca gaatatatga ttcaacatat tggtgatgaa
    20101 tttgaaggta ttgtcagctc agtagctaac ttcggtatgt tcattgaatt gccaaatacg
    20161 atagaaggta tggttcatat tgcgaatatg actgatgatt attaccgttt tgaagagcgt
    20221 caaatggcat taattggtga gcgtcaagct aaagtattta gaattggtga cacagttaag
    20281 gttaaagtga cgcatgttga tgtagatgaa cgattaattg attttcaaat tgtaggtatg
    20341 cctttaccga aaaatgatcg atcacagcgc ccagcgcgag gtaagacaat tcaagccaaa
    20401 acgcgtggta aatcattaga taaatcaaaa tctgatgata agggtcgtaa gaaaaaaggt
    20461 aagcaacgta aaggtaaaaa ccaacgtaat aatgataaat caggtaatag taagcataag
    20521 ccattttata aagataaaag tgtgaaaaag aaagcacgtc gtaagaaaaa ataagcagca
    20581 atgaggtgag tatgaatggc taagaagaaa tcaccaggta cattagcgga aaatcgtaag
    20641 gcaagacatg attataatat tgaagatacg attgaagcgg gaattgtatt gcaaggcaca
    20701 gaaataaaat caattcgccg aggtagtgct aaccttaaag atagttatgc gcaagttaaa
    20761 aacggtgaaa tgtatttgaa taatatgcat atagcaccat acgaagaagg gaatcgtttt
    20821 aatcacgatc ctcttcgttc tcgaaaatta ttattgcaca agcgtgaaat cattaaattg
    20881 ggtgatcaaa cacgtgagat tggttattcg attgtgccgt taaagcttta tttgaagcat
    20941 ggacattgta aagtattact tggtgttgca cgaggtaaga aaaaatatga taaacgtcaa
    21001 gctttgaaag aaaaagcagt caaacgagat gttgcgcgcg atatgaaagc ccgttattaa
    21061 gcgatttagt tgcttaatcg ggctatattt gatatagtta tatgtgcttt tgtaaattac
    21121 aaaagtatga tttgtttgat ttattatttc ggggacgttc atggattcga caggggtccc
    21181 ccgagctcat taagcgtgtc ggagggttgt cttcgtcatc aacacacaca gtttataata
    21241 actggcaaat caaacaataa tttcgcagta gctgcctaat cgcactctgc atcgcctaac
    21301 agcatttcct atgtgctgtt aacgcgattc aaccttaata ggatatgcta aacactgccg
    21361 tttgaagtct gtttagaaga aacttaatca aactagcatc atgttggttg tttatcactt
    21421 ttcatgatgc gaaacctatc gataaactac acacgtagaa agatgtgtat caggaccttt
    21481 ggacgcgggt tcaaatcccg ccgtctccat tatatagtct gcgaccttag tggttgtagg
    21541 ctttttattt ttgagtgcac agatagtgca cagaaaatgc acaggataca aaaagacacc
    21601 accaatttta gttggtagtg actttataag tatttaacta tttctttctg tgtactagga
    21661 tataaatgac catatcggtt atacacttct gtcgtatcgc tgtgacctaa acgctgagct
    21721 ataatcatta cactagcacc tagattaact aacatagatg catgactatg tcttaattcg
    21781 tgtataacga ttctagggaa attttgtccg tttggtaatt gctcatccaa cacttttaat
    21841 gcgttagtaa accaacgatc aatagtagac tcgctataag ctttatagaa tgtaccaaat
    21901 aatacataat catctttaaa tatgttattt tctttatacc aatttaaata atttttgatg
    21961 tcacccatca tgtgagtagg caaatatata tcacgtatgg ctgatttcgt tttaggggct
    22021 gtcacttcac cgtgatagtc cgttttgttt atatggataa agtcatcatc aaagttaata
    22081 tcgcgccatg tgagcgctct gatttcgcct ttacgtgctc cagagtagaa caatagttta
    22141 aagaataact tttgttgttg tgtcactagc gcaccataaa attgattgaa ttgttctaac
    22201 gtccaataat tcaatcgttt ctgtgattct atttcaaaat tccctacaag agatgcaaca
    22261 ttttgtttta actcatgaaa cttcattgca tgattcagta atgatactaa atatacatgc
    22321 atcttcttta agtagtctcc agaatgcccc tcttttaact ttttattctg aaatttcatc
    22381 acatcttgtg tagtcatttt aaatacatcc atagatttaa aataaggtag caaatggtta
    22441 tttgtatgtg tctttaatgc ttttacactt gatgtctttc gacgtgctga ataccagtct
    22501 atatattctt caacgagctt gtcaaaagat aatctattaa ggtgtccgac tccctctaat
    22561 tcgtccatca tttcgttaca tttctttact gcatctttac gttgtttaaa ccccttacgt
    22621 gttatgtact tacgagtatt gcttttgtca tagtaagtga tacggaaata gtaagtgcca
    22681 agtttagcgt ctttatatat gttgtgggat aagtttaagt tatatgacat tgtattcact
    22741 cttcactaat tttctctaga tcatgtttaa ctctatagtc atcaatgtat tctaatagat
    22801 caaagtattt gttagatatt gtcgtaagga attcatcgat gctctcatct tttaaaaatt
    22861 cttttgcttt tgaatcttca taatagtcaa ctactaattc ttgcgcattt attgttcttt
    22921 gataagcgaa atatgttaaa gattcaagat ctctatttcc taaatctaat tctaattgta
    22981 aataatgttg taacaatttt ctaaataaat tttcgttaaa attttcttta cctctttcat
    23041 aataggaaaa tataaaacga gaaactgaag atgataattc attagctaga aaactattgt
    23101 tagcacacat atttgtgtct aaaataaact ttatttcctc gtttgcaata ctttctaaca
    23161 accctagaaa atcaccgtat attaattgat gtacacttat attccctaac ttagcaatct
    23221 cttttaatct ttcattactt ggttttgtta gcccgttttc ccattttgaa acaatagatt
    23281 tatgagcttt atgtgtgaat ttttcaccaa actcttccat cgtaagacct aattcttttc
    23341 taattttttt tatattatta gctaaaattg attgttgtga aatactaaac gcctccttaa
    23401 tgatgaatat ttatgttagt attctatcat taatttagct ttagtggaat tataagtttc
    23461 ataaagtatc ataaaaagtg ttgacaagta aaaggagagg ttatatgctt gtagcataaa
    23521 gtttcaagga ggtggttttg atgaataata aagtaagcaa ttacagaagg tata
//
LOCUS       DALPQQ010000026        23351 bp    DNA     linear   BCT 22-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus strain K18-6-464
            SAMD00233528-rid16434743.denovo.026, whole genome shotgun sequence.
ACCESSION   DALPQQ010000026 DALPQQ010000000
VERSION     DALPQQ010000026.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMD00233528
            Sequence Read Archive: DRR236061
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 23351)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 23351)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001543423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001543423.1
            Genome Coverage       :: 77x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/22/2022 17:09:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,811
            CDSs (total)                      :: 2,743
            Genes (coding)                    :: 2,689
            CDSs (with protein)               :: 2,689
            Genes (RNA)                       :: 68
            rRNAs                             :: 2, 4, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 4, 2 (16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 54
            CDSs (without protein)            :: 54
            Pseudo Genes (ambiguous residues) :: 0 of 54
            Pseudo Genes (frameshifted)       :: 27 of 54
            Pseudo Genes (incomplete)         :: 27 of 54
            Pseudo Genes (internal stop)      :: 10 of 54
            Pseudo Genes (multiple problems)  :: 10 of 54
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..23351
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMD00233528-rid16434743.denovo.026"
                     /strain="K18-6-464"
                     /db_xref="taxon:1280"
                     /geo_loc_name="Japan: Niigata"
     gene            252..1652
                     /locus_tag="O7798_000919"
     CDS             252..1652
                     /locus_tag="O7798_000919"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499128.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HDC2863187.1"
                     /translation="MDFNKENINMVDAKKAKKTVVATGIGNAMEWFDFGVYAYTTAYI
                     GANFFSPVENADIRQMLTFAALAIAFLLRPIGGVVFGIIGDKYGRKVVLTSTIILMAF
                     STLTIGLLPSYDQIGLWAPILLLLARVLQGFSTGGEYAGAMTYVAESSPDKRRNSLGS
                     GLEIGTLSGYIAASIMIAVLTFFLTDEQMASFGWRIPFLLGLFLGLFGLYLRRKLEES
                     PVFENDVATQPERDNINFLQIIRFYYKDIFVCFVAVVFFNVTNYMVTAYLPTYLEQVI
                     KLDATTTSVLITCVMAIMIPLALMFGKLADKIGEKKVFLIGTGGLTLFSIIAFMLLHS
                     QSFVVIVIGIFILGFFLSTYEATMPGSLPTMFYSHIRYRTLSVTFNISVSIFGGTTPL
                     VATWLVTKTGDPLAPAYYLTAISVIGFLVITFLHLSTAGKSLKGSYPNVDNEQDRAYY
                     AEHPKEALWWVKERKN"
     gene            2196..3572
                     /locus_tag="O7798_000920"
     CDS             2196..3572
                     /locus_tag="O7798_000920"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499129.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AMP-binding protein"
                     /protein_id="HDC2863188.1"
                     /translation="MNVILEQLKTHTQNKPNDIALHIDDETITYSQLNARITSAVESL
                     QKYSLNPVVAINMKSPVQSIICYLALHRLHKVPMMMEGKWQSTIHRQLIEKYGIKDVI
                     GDTGLMQNIDSPMFIDSTQLQHYPNLLHIGFTSGTTGLPKAYYRDEDSWLASFEVNEM
                     LMLKNENAIAAPGPLSHSLTLYALLFALSSGRTFIGQTTFHPEKLLNQCHKISSYKVA
                     MFLVPTMIKSLLLVYNNEHTIQSFFSSGDKLHSSIFKKIKNQANDINLIEFFGTSETS
                     FISYNLNQQAPVESVGVLFPNVELKTTNHDHNGIGTICIKSNMMFSGYVSEQCINNDE
                     WFVTNDNGYVKEQYLYLTGRQQDMLIIGGQNIYPAHVERLLTQSSSIDEAIIIGIPNE
                     RFGQIGVLLYSGDVTLTHKNVKQFLKKKVKRYEIPSMIHHVEKMYYTASGKIAREKMM
                     SMYLRGEL"
     gene            3574..4713
                     /locus_tag="O7798_000921"
     CDS             3574..4713
                     /locus_tag="O7798_000921"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499130.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiolase family protein"
                     /protein_id="HDC2863189.1"
                     /translation="MNQAVIVAAKRTAFGKYGGTLKHLEPEQLLKPLFQHFKEKYPEV
                     ISKIDDVVLGNVVGNGGNIARKALLEAGLKDSIPGVTIDRQCGSGLESVQYACRMIQA
                     GAGKVYIAGGVESTSRAPWKIKRPHSVYETALPEFYERASFAPEMSDPSMIQGAENVA
                     KMYDVSRELQDEFAYRSHQLTAENVKNGNISQEILPITVKGEIFNTDESLKSHIPKDN
                     FGRFKPVIKGGTVTAANSCMKNDGAVLLLIMEKDMAYELGFEHGLLFKDGVTVGVDSN
                     FPGIGPVPAISNLLKRNQLTIENIEVIEINEAFSAQVVACQQALNISNTQLNIWGGAL
                     ASGHPYGASGAQLVTRLFYMFDKETMIASMGIGGGLGNAALFTRF"
     gene            4688..5053
                     /locus_tag="O7798_000922"
     CDS             4688..5053
                     /locus_tag="O7798_000922"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499131.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein VraC"
                     /protein_id="HDC2863190.1"
                     /translation="MQHYLLDSNQRLNVSFSKDSVAAYYQCFNQPYRKEVPPLMCASL
                     WPKFDLFKKYANSELILTKSAINQTQKIEVDTIYVGHLEDIECRQTRNITRYTMALTL
                     TKNDQHVITVTQTFIKAMK"
     gene            5056..5325
                     /locus_tag="O7798_000923"
     CDS             5056..5325
                     /locus_tag="O7798_000923"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499132.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDC2863191.1"
                     /translation="MKFNEIWINEYLALVNDDNPIHNEIVPGQLVSQMMLMAMSLETN
                     QCQINYVKPILINENIEFIEQHEHEIIAINDDGEIKIKISLSTKK"
     gene            complement(5526..5693)
                     /locus_tag="O7798_000924"
     CDS             complement(5526..5693)
                     /locus_tag="O7798_000924"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499133.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein VraX"
                     /protein_id="HDC2863192.1"
                     /translation="MIIYRQYHHEGAPVYEIITKTFQHVSIKCDDSFSDTEIFKLLSL
                     LQDDIDHMKVS"
     gene            complement(6200..7030)
                     /gene="thiD"
                     /locus_tag="O7798_000925"
     CDS             complement(6200..7030)
                     /gene="thiD"
                     /locus_tag="O7798_000925"
                     /EC_number="2.7.1.49"
                     /EC_number="2.7.4.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001185456.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional hydroxymethylpyrimidine
                     kinase/phosphomethylpyrimidine kinase"
                     /protein_id="HDC2863193.1"
                     /translation="MALKKVLTIAGSDTSAGAGMQADLKTFQELDTYGMVALTAIVTM
                     DKDTWSHDVTPLPMDVFEKQLETALSIGPDAIKTGMLGTEEIIKRAGEVYEASNAQYF
                     VVDPVMVCKGEDEVLNPGNTEAMIKYLLPKATVVTPNLFEAGQLSGLGKLNSIEDMKK
                     AATIIFDKGAQHVIIKGGKALDQDKSYDLYYDGQTFYQLTTDMFQQSYNHGAGCTFAA
                     ATTAYLANGKSPKEAVISAKAFVASAIKNGWKMNDFVGPVDHGAYNRIEHIDVEVTEV
                     "
     gene            7214..7870
                     /locus_tag="O7798_000926"
     CDS             7214..7870
                     /locus_tag="O7798_000926"
                     /EC_number="3.2.2.27"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499135.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="uracil-DNA glycosylase"
                     /protein_id="HDC2863194.1"
                     /translation="MEWSQIFHDITTKHDFKAMHDFLEKEYSTAIVYPDRENIYQAFD
                     LTPFENIKVVILGQDPYHGPNQAHGLAFSVQPNAKFPPSLRNMYKELADDIGCVRQTP
                     HLQDWAREGVLLLNTVLTVRQGEANSHRDIGWETFTDEIIKAVSDYKEHVVFILWGKP
                     AQQKIKLIDTSKHCIIKSVHPSPLSAYRGFFGSKPYSKANAYLESVGKSPINWCESEA
                     "
     gene            7871..8251
                     /locus_tag="O7798_000927"
     CDS             7871..8251
                     /locus_tag="O7798_000927"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499136.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF5327 family protein"
                     /protein_id="HDC2863195.1"
                     /translation="MLNRETLIARIEQELVQAEQAQHDHDFEKHMYAIHILTSLYAST
                     SNTPHIGEQQMNRRIANHNQMPQSQITQPTHQVTVAEIEAMGGKVNTHSAHHHNKSYS
                     QPSNQQQRLATDDDIGNGESIFDF"
     gene            8384..8752
                     /locus_tag="O7798_000928"
     CDS             8384..8752
                     /locus_tag="O7798_000928"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499137.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF423 domain-containing protein"
                     /protein_id="HDC2863196.1"
                     /translation="MKLFIILGALNAMMAVGTGAFGAHGLQGKISDHYLSVWEKATTY
                     QMYHGLALLIIGVISGTTSINVNWAGWLIFAGIIFFSGSLYILVLTQIKVLGAITPIG
                     GVLFIIGWIMLIIATFKFAG"
     gene            8873..10357
                     /locus_tag="O7798_000929"
     CDS             8873..10357
                     /locus_tag="O7798_000929"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499138.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="APC family permease"
                     /protein_id="HDC2863197.1"
                     /translation="MEKKNKQIDRGDLKQNLSEKFVWAIAYGSCIGWGAFILPGDWIK
                     QSGPIAASIGIVIGALLMILIAVSYGALVERFPVSGGAFAFSFLSFGRYVSFFSSWFL
                     TFGYVCVVALNATAFSLLVKFLLPDVLNNGKLYTIAGWDVYITEIIIATVLLLVFMLV
                     TIRGASVSGSLQYYFCVAMVIVVLLMFFGSFFGNNFALENLQPLAEPSKGWLVSIVVI
                     VSVAPWAYVGFDNIPQTAEEFNFAPNKTFKLIVYSLLAASLTYVVMILYTGWLSTSHQ
                     SLNGQLWLTGAVTQTAFGYIGLGVLAIAIMMGIFTGLNGFLMSSSRLLFSMGRSGIMP
                     TMFSKLHSKYKTPYVAIIFLVGVSLIAPWLGRTALTWIVDMSSTGVSIAYFITCLSAA
                     KLFSYNKQSNTYAPVYKTFAIIGSFVSFIFLALLLVPGSPAALTAPSYIALLGWLIIG
                     LIFFVIRYPKLKNMDNDELSRLILNRSENEVDDMIEEPEKEKTK"
     gene            complement(10499..10951)
                     /locus_tag="O7798_000930"
     CDS             complement(10499..10951)
                     /locus_tag="O7798_000930"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499139.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="threonine/serine exporter family protein"
                     /protein_id="HDC2863198.1"
                     /translation="MFWILNFIFSFLASMFFCVIFDAPRKLYLSCGFVGTCGWMVYTL
                     FFNGFNVHTIYSSFFGSLALGLLSHYMARKQKEPAIIFMVTGIIPLVPGGLAYDATKN
                     LVLLNFSTAINTMLEVTLIAGAIALGLLFADQISKLIVSGFVKSFKRL"
     gene            complement(10964..11728)
                     /locus_tag="O7798_000931"
     CDS             complement(10964..11728)
                     /locus_tag="O7798_000931"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000354082.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="threonine/serine exporter ThrE family protein"
                     /protein_id="HDC2863199.1"
                     /translation="MDINSEEYKQEVLIKDVVMLAARILLESGAEGTRVEDTMTRIAK
                     KLGYSESNSFVTNTVIQFTLHSESFPRIFRITSRDTNLIKISQANKISRQITNNEISL
                     AEAKTQLEKIYVAKRDSSLPFKGFAAAMIAMSFLYLQGGRLIDVLTAILAGSLGYLVT
                     EILDRKLHAQFIPEFIGSLVIGIIAVIGHTLIPTGDLATIIIAAVMPIVPGVLITNAI
                     QDLFGGHMLMFTTKSLEALVTAFGIGAGVGSVLILV"
     gene            complement(12277..13029)
                     /locus_tag="O7798_000932"
     CDS             complement(12277..13029)
                     /locus_tag="O7798_000932"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499141.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heme-dependent peroxidase"
                     /protein_id="HDC2863200.1"
                     /translation="MSQAAETLDGWYSLHLFYAVDWASLRIVPKDERDALVTEFQSFL
                     ENTATVRSSKSGDQAIYNITGQKADLLLWFLRPEMKSLNHIENEFNKLRIADFLIPTY
                     SYVSVIELSNYLAGKSDEDPYENPHIKARLYPELPHSDYICFYPMNKRRNETYNWYML
                     TMEERQKLMYDHGMIGRKYAGKIKQFITGSVGFDDFEWGVTLFSDDVLQFKKIVYEMR
                     FDETTARYGEFGSFFVGHIINTNEFDQFFAIS"
     gene            13197..14183
                     /gene="pta"
                     /locus_tag="O7798_000933"
     CDS             13197..14183
                     /gene="pta"
                     /locus_tag="O7798_000933"
                     /EC_number="2.3.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499142.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate acetyltransferase"
                     /protein_id="HDC2863201.1"
                     /translation="MADLLNVLKDKLSGKNVKIVLPEGEDERVLTAATQLQATDYVTP
                     IVLGDETKVQSLAQKLDLDISNIELINPATSELKAELVQSFVERRKGKATEEQAQELL
                     NNVNYFGTMLVYAGKADGLVSGAAHSTGDTVRPALQIIKTKPGVSRTSGIFFMIKGDE
                     QYIFGDCAINPELDSQGLAEIAVESAKSALSFGMDPKVAMLSFSTKGSAKSDDVTKVQ
                     EAVKLAQQKAEEEKLEAIIDGEFQFDAAIVPGVAEKKAPGAKLQGDANVFVFPSLEAG
                     NIGYKIAQRLGGYDAVGPVLQGLNSPVNDLSRGCSIEDVYNLSIITAAQALQ"
     gene            14186..15022
                     /locus_tag="O7798_000934"
     CDS             14186..15022
                     /locus_tag="O7798_000934"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014532577.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoate--protein ligase family protein"
                     /protein_id="HDC2863202.1"
                     /translation="MDLASKYFNGVNWRYIDHSSGLEPMQSFAFDDTFCESVGKDISD
                     NVVRTWIHQHTVILGIHDSRLPFLKDGIDYLTNEIGYNAIVRNSGGLGVVLDQGVLNI
                     SLMFKGQTETTIDEAFTVMYLLISKMFENENVDIDTMEIEHSYCPGKFDLSIDGKKFA
                     GISQRRVRGGIAVQIYLCVEGSGSERALMMQTFYEHALKGEVTKFKYPEIEPSCMASL
                     ETLLNKTITVQDVMFLLLYAIKDLGGVLNMTPITQEEWQRYDTYFDKMIERNKKMIDQ
                     MQ"
     gene            15609..16529
                     /gene="mvk"
                     /locus_tag="O7798_000935"
     CDS             15609..16529
                     /gene="mvk"
                     /locus_tag="O7798_000935"
                     /EC_number="2.7.1.36"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499144.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="mevalonate kinase"
                     /protein_id="HDC2863203.1"
                     /translation="MTRKGYGESTGKIILIGEHAVTFGEPAIAVPFNAGKIKVLIEAL
                     ESGNYSSIKSDVYDGMLYDAPDHLKSLVNRFVELNNITEPLAVTIQTNLPPSRGLGSS
                     AAVAVAFVRASYDFLGKSLTKEELIEKANWAEQIAHGKPSGIDTQTIVSGKPVWFQKG
                     HAETLKTLSLDGYMVVIDTGVKGSTRQAVEDVHKLCEDPQYMSHVKHIGKLVLRASDV
                     IEHHNFEALADIFNECHADLKALTVSHDKIEQLMKIGKENGAIAGKLTGAGRGGSMLL
                     LAKDLPTAKNIVKAVEKAGAAHTWIENLGG"
     gene            16534..17517
                     /gene="mvaD"
                     /locus_tag="O7798_000936"
     CDS             16534..17517
                     /gene="mvaD"
                     /locus_tag="O7798_000936"
                     /EC_number="4.1.1.33"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499145.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="diphosphomevalonate decarboxylase"
                     /protein_id="HDC2863204.1"
                     /translation="MIKSGKARAHTNIALIKYWGKKDEALIIPMNNSISVTLEKFYTE
                     TKVTFNDQLTQDQFWLNGEKVSGKELEKISKYMDIVRNRAGIDWYAEIESDNFVPTAA
                     GLASSASAYAALAAACNQALDMQLSDKDLSRLARIGSGSASRSIYGGFAEWEKGYSDE
                     TSYAVPLESNHFEDDLAMIFVVINQHSKKVPSRYGMSLTRNTSRFYQYWLDHIDEDLA
                     EAKAAIQDKDFKRLGEVIEENGLRMHATNLGSTPPFTYLVQESYDVMALVHECREAGY
                     PCYFTMDAGPNVKILVEKKNKQQIIDKLLTQFDNNQIIDSDIIATGIEIIE"
     gene            17530..18606
                     /locus_tag="O7798_000937"
     CDS             17530..18606
                     /locus_tag="O7798_000937"
                     /EC_number="2.7.4.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499146.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphomevalonate kinase"
                     /protein_id="HDC2863205.1"
                     /translation="MIQVKAPGKLYIAGEYAVTEPGYKSVLIALDRFVTATIEEADQY
                     KGTIHSKALHHNPVTFSRDEDSIVISDPHAAKQLNYVVTAIEIFEQYAKSCDIAMKHF
                     HLTIDSNLDDSNGHKYGLGSSAAVLVSVIKVLNEFYDMKLSNLYIYKLAVIANMKLQS
                     LSSCGDIAVSVYSGWLAYSTFDHEWVKHQIEDTTVEEVLIKNWPGLHIEPLQAPENME
                     VLIGWTGSPASSPHFVSEVKRLKSDPSFYGDFLEDSHRCVEKLIHAFKTNNIKGVQKM
                     VRQNRTIIQRMDKEATVDIETEKLKYLCDIAEKYHGASKTSGAGGGDCGITIINKDVD
                     KEKIYDEWTKHGIKPLKFNIYHGQ"
     gene            18783..19124
                     /locus_tag="O7798_000938"
     CDS             18783..19124
                     /locus_tag="O7798_000938"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499147.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1450 domain-containing protein"
                     /protein_id="HDC2863206.1"
                     /translation="MKNTFLICDECQAVNIRTLQKKLEKLDPDAEIVIGCQSYCGPGR
                     RKTFTFVNNRPLAALTEEELIEKVSQQLKKPRDPEEEERLRKRHEERKRRKEEQDRKL
                     KEKLEKRKAQQ"
     gene            complement(19176..20498)
                     /locus_tag="O7798_000939"
     CDS             complement(19176..20498)
                     /locus_tag="O7798_000939"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499148.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-containing oxidoreductase"
                     /protein_id="HDC2863207.1"
                     /translation="MKTYDLIVIGFGKAGKTLAKYAASTGQHVAVIEQSPKMYGGTCI
                     NIGCIPSKTLVHDGLEGKSFEASYNRKNDVVNALNNKNYHLLADDNNIDVLDFKAQFK
                     SNTEVNLLDQHDDIVDSITAPHIIINTGATSVIPNIKGLDQAKHVFDSTGLLNISYQP
                     KHLVIVGGGYIALEFASMFANLGSKVTVLERGESFMPREDQDVVAYGITDLENKGIAL
                     HTNVETTELSSDNHHTTVHTNVGNFEADAVLLAIGRKPNTDLALENTDIELGDRGEIK
                     VNAHLQTTVPHIYAAGDVKGGLQFTYISLDDYRIIKSALYGNQSRTTDNRGSVPYTVF
                     IDPPLSRVGLTSKEAAAQHYDYTEHQLLVSAIPRHKINNDPRGLFKVVINNENNMILG
                     ATLYGKQSEELINIIKLAIDQNIPYTVLRDNIYTHPTMAESFNDLFNF"
     gene            complement(20485..20925)
                     /locus_tag="O7798_000940"
     CDS             complement(20485..20925)
                     /locus_tag="O7798_000940"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006189740.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Rrf2 family transcriptional regulator"
                     /protein_id="HDC2863208.1"
                     /translation="MNLEFNIAVHVLAFLTKHHSEKFNSSSLAELTCLNPVQLRRVTT
                     QLVDLKMIDTIRGKDGGYLANDQSADVSLATLYKHFVLEKEHHTRLFTGDEGSHCQIA
                     RNIATTMSHYQQDEQNIIINFYNGKTIKDVIEDIQKEDLCHENI"
     gene            20983..21084
                     /locus_tag="O7798_000941"
     CDS             20983..21084
                     /locus_tag="O7798_000941"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499150.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDC2863209.1"
                     /translation="MCQYLCLKSVELGVVIVMIYCLKVDALTVRLHN"
     gene            21550..22959
                     /locus_tag="O7798_000942"
     CDS             21550..22959
                     /locus_tag="O7798_000942"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499151.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HDC2863210.1"
                     /translation="MSIDMYLDRSRNQASSVGNLSQTMNSNYDALEKAITQFINDDAL
                     KGKAYTSAKQFFSTVLIPLSTSMKTLSDLTKQACDNFVSRYTSEVDSISLKESELEED
                     IRSLSQQITRYENLNNNLKKHASDNQQAISSNQQIIRTLGQQKHELEEKLRKLREFNQ
                     KSPEIFKEVEEFQKIVQQGLTQAQNFWNFSTNQFNIPSGKELDWAKASHEKYLKVAMG
                     KIEHKAEKETLNKADFAVIKAYAKEHPEDDIPKSILKYINDNKDSIKRDIGLDITSTL
                     LEQGGINASKFGVFINTAGGVKGPAGPNSFVEVKRTSGNVFIENGSKFAKGGKYLGKG
                     VAGVGFGIGMYDDLANDDKTFGEALSHNGMTLAAGSAGTAVGAGLATFVLGSNPVGWV
                     ILAGLAMSTVFALGTDLIYQNNIFGLKDKVDWVGHKIDNSIDVVKKTTEKSMDSVGNA
                     VSEAKNIISNHINPMKWAW"
     gene            22963..>23351
                     /locus_tag="O7798_000943"
     CDS             22963..>23351
                     /locus_tag="O7798_000943"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001836194.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF443 family protein"
                     /protein_id="HDC2863211.1"
                     /translation="MLFNIKVINKNPRYKVVQYNDEYLLIDLVSTWLVYFFPFINWFI
                     PKRYAKLSEKELENLNVDKQNKNNIFWPVTGSSFLFVVILRKYVHTFEVQLDNKILIS
                     LCFIGFIGIAAFYIYLNKKLKLKIYDD"
BASE COUNT         8070 a         3444 c         4348 g         7489 t
ORIGIN      
        1 cttacatgaa gttgtgtgct atcgctattt ttagttataa ttccaaaaag ttaatcgttc
       61 gatgatttaa gaattattat tgtttaattc aaatgtatga gggtataaaa tcattgaatt
      121 taattcgata aagcgaaatt tttgaacaaa catacttttg tatttatata aaagtttaaa
      181 ttcttataaa tttgacaaaa ctaattaact ccgtataatt atgaaacata caagagggag
      241 tgtatgaatt catggatttt aataaagaga atattaacat ggtggatgca aagaaagcta
      301 aaaaaaccgt tgttgcaacc ggtatcggta atgcaatgga atggttcgat tttggtgtct
      361 atgcatatac aactgcgtac attggagcga acttcttctc tccagtagag aatgcagaca
      421 ttcgacaaat gttgactttc gcagcattag ccattgcgtt tttattaaga ccaattggtg
      481 gtgtcgtatt tggtattatt ggtgacaaat atggacgtaa agttgtatta acatctacaa
      541 ttattttaat ggcattttca acattaacca ttggattatt gccaagctat gatcaaattg
      601 gactttgggc accaatacta ttattgcttg caagagtact acaagggttt tcaacaggtg
      661 gagagtatgc gggggcaatg acatatgttg ccgaatcatc tccagataag cgtcgtaact
      721 cattaggtag tggactagaa attgggacat tatcaggtta catagctgct tcaattatga
      781 ttgctgtatt aacattcttt ttaacagatg aacaaatggc atcatttggt tggagaatcc
      841 cattcttact cggtttattc ctaggattat tcggcttata tttacgtcgt aagctggaag
      901 aatcaccagt tttcgaaaat gatgttgcaa cacaaccaga aagagataac attaactttt
      961 tacaaatcat cagattttat tacaaagata tatttgtatg ttttgtagct gttgtattct
     1021 tcaatgttac aaactatatg gtaactgcat atttaccaac ctatttagaa caagttatta
     1081 aattagatgc aacgacaaca agtgtattaa ttacttgtgt catggcaata atgattccat
     1141 tagcattaat gtttggtaag ttagcggata aaataggtga aaagaaagta tttctaattg
     1201 gtactggtgg gctaacatta ttcagtatca tcgcatttat gttattacat tcacaatcat
     1261 ttgttgtaat agtaatcggt atatttatat taggattttt cttatcaact tacgaagcga
     1321 caatgccagg gtcgttacca acgatgtttt acagtcatat aagatatcga actttatcag
     1381 taacatttaa tatctctgtt tcgatatttg gtggtacgac gccattagtt gcaacatggt
     1441 tagttacgaa aactggagat ccattagcac ctgcgtatta tttaacagca atcagtgtta
     1501 ttggcttttt agttattaca ttcttacatt taagtacagc aggaaaatct ctaaaaggtt
     1561 cgtatccaaa tgtagataac gagcaagata gagcttatta tgcagaacat ccaaaagaag
     1621 cattatggtg ggttaaagaa cgtaagaatt agagatttta ataaaaagta taaatcaatc
     1681 gtatataagc actttaaagc tagtaggttc tgctaacttt aaagtgcttt ttaaattgag
     1741 aactgtaatt agccgtaata aagtttttgt atatacataa acccccactg caatgattat
     1801 cgcaatgggg gaaagagggg acttaaagca tatgtttagc tttgaatact taaaattctc
     1861 ttgctattga aatgttagga tgtaaatatg tcttagagta ttttgtccaa cgcaattaat
     1921 attgagactc taaccttcaa tattattata gagaacacaa acttaaatag attgggtgac
     1981 ttatttgtgt cagttattgc gattgcgata acttcttttc tctatataca tatagtaacg
     2041 tcttatctaa taaaaaacat ggtactacag tatcaaattt atctagggct taagtttgat
     2101 ttttataata ggcaggttta cctgataaaa atacttattc attatataat gttaacaata
     2161 tgtattttaa agtttacatt gagtgaggga tattgatgaa cgtaatttta gaacagttga
     2221 aaacacatac tcaaaataaa cctaatgaca tagcattaca tatcgatgat gaaacaatta
     2281 catatagtca actaaatgcc cgcatcacta gcgcagttga atctttgcag aaatattcac
     2341 ttaaccctgt cgttgctatt aatatgaaat caccggtgca aagtattatt tgttatttag
     2401 ctttgcatcg tttacataaa gtgcctatga tgatggaagg taaatggcaa agtactatac
     2461 atcgtcaatt gattgaaaaa tatggtatta aagatgtaat tggagataca ggtctcatgc
     2521 agaatataga ctcaccgatg tttattgatt caacgcaatt acagcactac cccaatttat
     2581 tacatattgg ttttacttca gggacaactg gactgccaaa agcatattat cgtgatgaag
     2641 attcatggtt ggcttctttt gaagttaatg aaatgttgat gttaaaaaat gaaaatgcaa
     2701 tagcagcccc tggaccacta tcgcactcgt taacattata tgcgttattg tttgctttaa
     2761 gttccggtcg tacttttata ggacagacca cttttcatcc tgaaaagtta cttaatcaat
     2821 gtcataaaat atcatcatac aaagttgcta tgtttcttgt tccaacgatg attaaatcat
     2881 tattgttagt ttacaacaat gaacatacaa tccaatcatt ttttagcagt ggagataagc
     2941 tgcattcttc tatttttaaa aagataaaaa atcaagcaaa tgacataaat ttgattgaat
     3001 tttttggtac atcggaaacc agttttatca gctataactt gaatcagcaa gcaccagttg
     3061 aatcagtagg tgtgctattt ccaaatgtgg aattgaaaac aacgaatcac gatcacaatg
     3121 gtataggaac tatttgtata aaaagtaata tgatgtttag tggctatgta agtgaacaat
     3181 gtataaataa tgatgaatgg tttgttacta atgataatgg ctatgtaaaa gagcagtatt
     3241 tatatttaac gggacgtcaa caggatatgt taattattgg tggtcaaaat atatatccag
     3301 cacatgttga acgcctttta acgcaatctt cgagcattga tgaagcaatt atcatcggta
     3361 ttccaaatga gcgttttggt caaataggcg tattgcttta ttctggtgat gtgacactta
     3421 cacataaaaa tgtaaaacaa tttttaaaaa agaaagtgaa acgctatgaa attccatcga
     3481 tgattcatca tgtagaaaag atgtattaca ctgcaagtgg taaaattgct agagaaaaaa
     3541 tgatgtcgat gtatttgaga ggtgaattat aatatgaatc aagcagtcat agttgcagct
     3601 aaacgaactg catttgggaa atatggtggc actttaaaac atttagagcc agaacaattg
     3661 cttaaacctt tattccaaca ttttaaagag aagtatccag aggtaatatc taaaatagat
     3721 gatgtagttt taggtaatgt tgttgggaat ggtggcaata ttgcaagaaa agcattgctt
     3781 gaagcggggc ttaaagattc aatacctggc gtcacaatcg atcggcaatg tgggtctgga
     3841 cttgaaagtg ttcaatatgc atgtcgcatg atccaagccg gagctggcaa ggtatatatt
     3901 gcaggtggtg ttgaaagtac aagtcgagca ccttggaaaa tcaaacgacc gcattctgtg
     3961 tacgaaacag cattacctga gttttatgag cgtgcatcat ttgcacctga aatgagcgac
     4021 ccatcaatga ttcaaggtgc tgaaaatgtg gccaagatgt atgatgtttc aagagaatta
     4081 caagatgaat ttgcttatcg aagtcatcaa ttgacagcgg aaaatgtaaa gaatggaaat
     4141 atttctcagg aaatattacc tataaccgtt aaaggagaaa tattcaacac tgatgaaagt
     4201 ctaaaatcac atattccgaa agataacttt ggccgattta agcccgtgat caaaggtggg
     4261 accgttaccg ctgcgaatag ttgtatgaaa aatgatggtg cagttttatt gcttattatg
     4321 gaaaaagata tggcatacga attaggtttc gagcatggtt tattatttaa agatggtgtt
     4381 acggtaggtg ttgattctaa ttttcctggc attggtccag taccagccat ttccaactta
     4441 ctaaaaagaa atcaattaac gatagaaaat attgaagtca ttgaaattaa cgaagcgttc
     4501 agtgcacagg tagttgcctg ccaacaagct ttaaatattt caaatacgca attaaatata
     4561 tggggtggtg cattagcatc aggtcatcca tacggtgcaa gcggtgccca attagtgact
     4621 cgattatttt atatgtttga caaagagact atgattgcat ctatggggat agggggaggt
     4681 ctaggaaatg cagcattatt tactcgattc taaccagcga ttaaatgtgt cattttctaa
     4741 ggatagtgtg gctgcatatt atcagtgttt taaccaacct tatagaaaag aagtaccacc
     4801 attaatgtgt gcgtcattat ggccaaaatt tgatttattt aaaaaatatg caaatagcga
     4861 actgatttta acaaaatcag caattaatca aactcaaaag atagaagtag acacaatata
     4921 tgtagggcat ttagaagata ttgaatgccg acagactcgc aatatcacac gttatacaat
     4981 ggctttaaca ttaactaaaa atgatcaaca tgtcataacg gttacacaaa cttttattaa
     5041 ggcgatgaag tagagatgaa gtttaatgag atatggataa atgaatattt ggcgctcgta
     5101 aatgatgata atccaataca taatgagatt gtgccaggac aattagtgag tcaaatgatg
     5161 ctgatggcta tgtcattaga gacaaaccag tgtcaaatta actacgttaa acctatttta
     5221 ataaatgaaa atatcgaatt cattgaacaa cacgaacacg aaattatagc aattaatgac
     5281 gatggagaga ttaaaataaa aatttctttg agcacaaaaa aataaccgat attagctgca
     5341 tgaacgcata ttaattagga gatgaaagga cagctaatat cagttatgta ttgttattat
     5401 tattgggaac agagatgaat ataggttacg tttctttctt tgcacgggga tgcattaatc
     5461 taaaataata ataacaacta tatcaatgtt taataaattc tggattattg gaacgattag
     5521 tcaatttaac taactttcat atgatctata tcgtcttgta ataaagagag caatttgaat
     5581 atttcagtat cactaaatga atcgtcacat ttaattgaaa catgctgaaa cgttttggtt
     5641 ataatttcat aaactggtgc gccttcatgg tgatactgtc gataaataat cataacctat
     5701 attacctcct ttgctactct atggttatat tataaataac atttttatgt gtgacatcaa
     5761 ccttaagtat caacttttta tcagacatag aacgtatgat ttactaagac tatttatgta
     5821 taaaagttct aaataaatat atatttatag agtcgcctgg cagtcatttg ggaaatataa
     5881 catatatgat tagagaggca tctatcgcaa aagaatgata atgatagagg tattgagcat
     5941 atagatgagt ttaagttcat cttgaaaata aagggttatt tagtcataga tgtagatgta
     6001 taggaaatat ttgtatgtat tgttcgatat gtatgaaatt ttcaataaaa gctaataacg
     6061 cttatatgta actttcaaat ttaaattata tacagagcat gatgattata aaaaaataac
     6121 cacatcacat aaattgagtt catacccaat ttaagtggtg tggctaataa tgttgattta
     6181 tagatgaacc gcctaatcgt taaacctctg ttacttcaac atcgatatgt tcaatacggt
     6241 tgtatgcacc gtgatccaca ggaccaacaa aatcattcat tttccaaccg tttttaatag
     6301 cagaagcgac gaaagctttc gcgctaatca cagcttcttt cggtgactta ccgttagcta
     6361 aatatgcagt tgttgccgca gcaaatgtac aaccagcacc atggttataa ctttgttgga
     6421 acatgtctgt tgttagttga taaaatgttt gaccatcata gtataagtca tacgatttat
     6481 cttgatctaa agctttgcca cctttaatga tgacatgctg tgcgccttta tcaaagataa
     6541 ttgttgcagc ctttttcata tcttcaattg aatttaattt acctaatcct gataattgac
     6601 ccgcttcaaa taagtttggt gtcactaccg ttgctttagg tagtaaatat ttaatcatcg
     6661 cctcagtatt tccaggatta agcacttcat cttcgccttt acaaaccatg acaggatcta
     6721 ctacaaaata ttgtgcatta gatgcctcat atacttctcc agcacgtttg attatctcct
     6781 cagtacctaa catacctgtt ttaatagcat caggtccgat tgataaagcc gtttcaagtt
     6841 gtttttcaaa tacatccatt ggtaatggtg taacatcgtg tgaccatgta tctttatcca
     6901 tagtaacgat ggcagttaaa gcgaccatgc catacgtatc taattcttgg aacgttttca
     6961 aatctgcttg catacctgcg ccagcacttg tgtcagaacc ggcaattgtt aaaactttct
     7021 ttaaagccat tgagcttcac tcctacataa taatattgta ttcatcatat catttttaac
     7081 ctaattgaaa aatattaagc attcaatatt tgatgattgt tgaaatgaat cattcatact
     7141 attgtaactt ttgaaaatgt cattcacttt agataagtgt gatatgttaa aatatgtcct
     7201 gaggtgagat tgaatggaat ggtcgcaaat ttttcatgac ataacaacga aacatgactt
     7261 taaagctatg catgattttt tagaaaaaga atattcgact gcaatcgtat accctgatag
     7321 ggaaaatata tatcaagcgt ttgatttaac accgtttgaa aatatcaaag ttgttatatt
     7381 aggacaagac ccgtatcatg gtccaaacca agcacatgga ttagcatttt cagtgcaacc
     7441 taacgcaaaa ttccctccat ctttacgtaa tatgtataaa gaattagcag atgatattgg
     7501 atgcgttaga caaacaccgc atttacaaga ttgggcaaga gaaggcgtct tgttattgaa
     7561 tacagtttta accgtaagac agggtgaagc aaattctcat cgtgatattg gttgggaaac
     7621 atttactgat gaaattatta aagcagtgtc tgattataaa gaacatgttg tctttatttt
     7681 gtgggggaaa cctgcacagc aaaaaataaa gcttatcgat acatctaaac attgtattat
     7741 aaaatcagtg catcctagtc cactgtctgc atatagagga ttctttggat caaaaccgta
     7801 ttccaaagcg aatgcctatt tagagtcagt aggaaaatca ccaattaatt ggtgtgaaag
     7861 tgaggcgtag atgttgaata gagaaacttt aatagcacga attgagcaag aattagtaca
     7921 agcagagcag gcacagcatg accatgactt tgaaaaacat atgtatgcca tacatatatt
     7981 aacatcttta tatgcttcaa catcaaatac accacatatt ggtgaacaac aaatgaatcg
     8041 tcgtattgct aaccataatc aaatgccaca atcacaaata acgcagccaa ctcatcaagt
     8101 gacagttgct gaaattgaag cgatgggtgg taaagtaaat acgcattcag cacatcatca
     8161 taataagtca tattcacaac cttcaaacca acaacaaaga ttagcgacag atgatgacat
     8221 tggcaatggt gaatccatat ttgattttta aaaagcaaca atgaaacata attacttaat
     8281 agcttgttaa gtatgtaggt taataatcaa gacgcatata cttttattcg agtgttcgga
     8341 tttaaacatt tattaatact gaattatata aggagaggta gcaatgaaat tatttattat
     8401 tttaggtgca ttaaacgcga tgatggctgt cggtacaggt gcatttggtg cgcatggttt
     8461 acaaggaaaa ataagtgatc actatttatc agtatgggaa aaagcaacga cgtatcaaat
     8521 gtaccatggc ttagcattat taattatagg tgtaattagt ggtacaactt caatcaatgt
     8581 taactgggct ggctggttaa tatttgctgg tattattttc tttagtggat cattatatat
     8641 tttagtatta actcaaatta aagttttagg tgcgattacg ccaattggtg gcgtattgtt
     8701 catcattgga tggataatgt taatcattgc gacattcaaa tttgctggtt aaattttaaa
     8761 actttagatt acctatgtaa ctaaacatta aatttttaat aaaaataatc aagaaaaaga
     8821 gttacaaact catcttttgg gtatagaata ccttcgaggt gagtttttat ttatggaaaa
     8881 aaagaataag caaatagata gaggcgattt aaaacaaaac ctatctgaaa agtttgtatg
     8941 ggcgattgca tatggttcat gtatcggatg gggcgcattc atcttaccag gagactggat
     9001 taagcagtca ggtccgattg cagcatcaat tggtatagtt attggtgcat tattaatgat
     9061 attaattgcg gttagttatg gcgcattagt agagagattt ccagtatcag ggggcgcgtt
     9121 tgcctttagt ttcttaagtt tcggcagata tgtgagtttc ttctcatcat ggtttttaac
     9181 ttttggttat gtctgtgtcg ttgctttaaa tgcgaccgca ttcagtttac tagttaaatt
     9241 cttattgcca gatgtcttaa ataatgggaa actatacacc attgcgggct gggacgttta
     9301 tattacggaa atcattattg cgaccgtatt actacttgta ttcatgctag taacgattcg
     9361 tggcgcaagt gtatctggat cattacaata ttatttctgt gtggcgatgg taatcgtcgt
     9421 attattgatg ttctttggtt cattctttgg taataatttt gcacttgaaa atttacaacc
     9481 gttagctgaa cctagcaaag gatggttagt gtctattgtg gttattgtat ccgtggcacc
     9541 atgggcatat gttggatttg ataatattcc acaaacagca gaagagttta actttgcacc
     9601 aaacaagaca tttaagctta tcgtgtacag tttattagca gcatcattaa cttatgttgt
     9661 catgatttta tacactggtt ggttatcaac aagtcatcaa agtttaaatg ggcagttgtg
     9721 gttaacaggt gctgttacac aaacagcatt tggttatatt ggattaggtg tattagcaat
     9781 tgcaattatg atgggtatat ttactggttt aaatggattc ttgatgagtt caagtcgctt
     9841 gttattttct atgggacgtt caggtattat gccaacaatg tttagtaaat tacatagtaa
     9901 atacaaaaca ccatatgtcg caatcatatt cctagtagga gtgtcgttaa ttgcaccttg
     9961 gctaggaaga actgcattga cttggattgt agatatgtca tctactggtg tatccattgc
    10021 ctactttatt acatgtttgt ctgcagcgaa attattcagt tataacaaac aaagtaatac
    10081 gtatgcaccg gtttacaaaa cgtttgctat tatcggctca tttgtatcat tcattttctt
    10141 agcgttgtta ttagtgccag gttctcctgc agcactgact gcaccgtctt atattgcatt
    10201 acttggatgg ttaatcatcg gtttaatatt ctttgtgatt cgatatccta aattgaaaaa
    10261 tatggataat gatgaattaa gtcgcttgat tttaaataga agtgaaaatg aagttgatga
    10321 tatgattgaa gaacctgaaa aagaaaaaac taaataataa aagaatcgca caataaacct
    10381 tcttcattcg gaggcgtatc gtgcgatttt ttgtattata aattgacatt taagacgagg
    10441 cagctgaacc ttatatataa ttgctaagag ttagggctga gccatttcta acaaatattt
    10501 ataatcgttt aaaagatttc acgaacccag aaacaattaa tttggaaatt tggtcggcga
    10561 ataataaacc taatgcgatg gcgcctgcaa taagtgtaac ctctagcatg gtattgattg
    10621 ctgtactgaa atttaataag actaaatttt ttgtagcatc gtatgctaag ccaccaggta
    10681 ctaatggaat gatacccgtt accataaaaa tgatggcagg ttctttttgt ttacgagcca
    10741 tataatgact taacaagcct aatgctaaac taccaaagaa actagagtat atagtgtgca
    10801 cattaaagcc gttgaagaat aaggtgtaaa ccatccatcc acacgtacca acgaaaccac
    10861 atgatagata taattttcta ggtgcatcaa aaatgacgca gaagaacatt gaagctaaaa
    10921 agctaaagat aaagtttaag atccaaaaca tagtctgata ctcctatact aaaattaata
    10981 cgctaccaac gccagcaccg atgccaaacg cagtaaccaa tgcttctaat gatttcgttg
    11041 tgaacatcaa catgtgtcca ccaaataaat cttgtattgc gtttgttatt aatacaccag
    11101 gaacaatagg catgactgcc gcaatgataa tagttgccaa gtcacctgtt ggaataagtg
    11161 tatgtccaat aacggcgata atcccaataa ctaatgaacc aatgaattct gggataaact
    11221 gtgcgtgtaa cttacgatct aaaatctcag tgactaggta tcctagacta cctgctaata
    11281 tcgcagttaa aacatcaatc aatctaccac cttgtaaata taagaaactc attgcaatca
    11341 ttgctgcagc aaaaccttta aagggaagac tgctgtcacg cttagcaaca tatatttttt
    11401 caagttgcgt ttttgcttcg gctaaagaaa tttcattgtt tgtaatttga cgcgaaattt
    11461 tattagcttg agaaattttt attaagtttg tatctcgaga ggtaattcta aatattctag
    11521 gaaacgattc cgaatgtaac gtaaactgga tgacagtgtt tgtaacaaag ctgttacttt
    11581 cactgtaacc aagttttttt gcaatacgtg tcatggtatc ttctacacgc gtaccttctg
    11641 caccagattc taatagtatg cgagcagcaa gcatgacaac gtctttgata agtacctctt
    11701 gtttgtattc ttctgaattt atgtccattt catcaccatt gtttataaga atttaatact
    11761 cattatagtt tatacactat aaaataacca catgagcttt ttgataagtt gttattgatt
    11821 ttaaaaaact aatatttgat actattgtaa taataatcat cggaattttt agtagttaaa
    11881 attctcttga agtataaaaa ggaaaaatta ttgaaaaaaa ttcgacaaaa atatgtttca
    11941 aatatttcaa ataggttaaa ataatattag ttaaccatta caaaaattgt atagagtagc
    12001 gactgtataa tttctattga ggttaacgtt tatatgtagt gatagtagtt aaagttctcc
    12061 caaggaagac tactcgggta cactttgcta tgagcaaagt gtactttgtt attgataata
    12121 cattagcaca tatatataag tttaaacata cagatttcaa ctatttacca aatcacgtct
    12181 tatgtatacg ggaatatact gaagataaac gaaaaattcc aagcttaaac cgataagctt
    12241 ggaatttttt tattaattta taaacgtacc aatgtattaa gaaatcgcaa agaattgatc
    12301 gaattcgttt gtgttaataa tatgtcctac aaagaaacta ccgaattcac cgtatcgtgc
    12361 tgttgtttca tcaaagcgca tttcgtatac aatttttttg aattgtaata cgtcatctga
    12421 gaacaatgtt acgccccatt cgaaatcatc aaaccctaca gaaccagtaa taaattgttt
    12481 gattttgcca gcatattttc taccaatcat accatggtca tacattaatt tttggcgttc
    12541 ttccatagtt aacatgtacc agttataagt ttcattacga cgtttgttca ttggatagaa
    12601 acaaatataa tcagaatgtg gtaattctgg gtataatctt gctttgatat gagggttctc
    12661 ataaggatct tcatcagatt taccagctaa ataattgctc aattcaatga ctgatacata
    12721 tgaatatgta gggattagga agtcagcaat gcgcaatttg ttaaattcat tttcaatatg
    12781 atttaaagac ttcatttcag gacgtaagaa ccataataac aaatctgctt tttgaccagt
    12841 tatattataa atagcttgat caccagattt tgatgatctt acagttgctg tattttctaa
    12901 aaatgattga aattcagtga caagtgcatc gcgttcgtcc tttggaacta tacgtaatga
    12961 tgcccaatca actgcataaa ataaatgtag actataccaa ccatctaatg tttcggctgc
    13021 ttgactcatg tttatcgctc cttttcaaaa atcatcagtt ctttataaat tttatcataa
    13081 agcaaagggg taacgataaa attatgatta caaattggtg acgtggcatt atgaaataaa
    13141 atggcgtata attataccgt gaatgattaa taagatttat attacaggag gacattatgg
    13201 ctgatttatt aaatgtatta aaagacaaac tttctggtaa aaacgttaaa atcgtattac
    13261 ctgaaggaga ggacgaacgt gttctaacag ctgcaacaca attacaagca acagattatg
    13321 ttacaccaat cgtgttaggt gatgagacta aggttcaatc tttagcgcaa aaacttgatc
    13381 ttgatatttc taatattgaa ttaattaatc ctgcgacaag tgaattgaaa gctgaattag
    13441 ttcaatcatt tgttgaacga cgtaaaggta aagcgactga agaacaagca caagaattat
    13501 taaacaatgt gaactacttc ggtacaatgc ttgtttatgc tggtaaagca gatggtttag
    13561 ttagtggtgc agcacattca acaggcgaca ctgtgcgtcc agctttacaa atcatcaaaa
    13621 cgaaaccagg tgtatcaaga acatcaggta tcttctttat gattaaaggt gatgaacaat
    13681 acatctttgg tgattgtgca atcaatccag aacttgattc acaaggactt gcagaaattg
    13741 cagtagaaag tgcaaaatca gcattaagct ttggcatgga tccaaaagtt gcaatgttaa
    13801 gcttttcaac aaaagggtct gctaaatcag acgacgtgac aaaagttcaa gaagctgtca
    13861 aattagcaca acaaaaagct gaagaagaaa aattagaagc aatcattgat ggcgaattcc
    13921 aatttgatgc tgcgattgta ccaggtgttg ctgagaaaaa agcgccaggt gctaaattac
    13981 aaggtgatgc aaatgtcttt gtattcccaa gtttagaagc tggtaatatt ggttacaaaa
    14041 ttgcacaacg tttaggtgga tatgatgcag ttggtccagt attacaaggt ttaaattctc
    14101 cagtaaatga cttatcacgt ggctgctcaa ttgaagatgt atacaatctt tcaattatta
    14161 cagcagcgca agccttacaa taacgatgga tttagcgagt aaatatttta atggcgtcaa
    14221 ctggcgatat atcgatcatt cttctggatt agaacctatg caatctttcg cattcgatga
    14281 tacattttgc gaaagtgtgg gcaaagatat atcagataat gttgtgcgta cttggattca
    14341 tcaacatact gttattcttg gtattcatga ttcaagattg ccgtttttaa aagatggcat
    14401 tgattattta acgaatgaga ttggttataa tgccattgtt agaaattctg gtggcttagg
    14461 tgtcgttcta gatcaaggtg tattaaatat atcgctgatg ttcaaaggac aaacagaaac
    14521 aacgattgat gaagcgttta ctgtgatgta cctcttaatt agcaaaatgt tcgaaaatga
    14581 gaatgttgat attgatacga tggaaattga acattcttat tgcccaggaa aatttgactt
    14641 aagtatcgat ggtaagaaat ttgcaggcat atcgcaacga agagttagag gcggtattgc
    14701 tgtacaaatt tatctttgtg ttgaaggctc tggttcagaa cgtgcattga tgatgcaaac
    14761 attttatgaa catgctttaa aaggtgaagt gactaaattt aaatatcctg aaattgaacc
    14821 atcttgtatg gcctcattag agacattgct taacaaaacg attactgttc aagatgtaat
    14881 gtttttacta ttatatgcaa tcaaagatct tggcggtgta ttaaatatga cgccaattac
    14941 tcaagaagaa tggcaaagat acgatacgta ttttgataaa atgattgaaa gaaacaagaa
    15001 aatgatagat caaatgcaat agttaaatat ttaacagccc ctttcaagtt atcgtttggg
    15061 gctgttattt ttgaaagtat ccataaaaag cataaatatg ttattgacct aatatttaaa
    15121 ttgaacatca ttaaattaaa agtaatgata tgatggaaat aataaattta ataagaaaat
    15181 ttcatgtttt acgtattaaa tagattgaga atagggtata tataatgcgt atgactatga
    15241 aagaaacgac cttctattga aatgttctaa tactttagta gtaaatctat atattccaat
    15301 tattatttgt agtattatag ttagggtgga aaattataaa ttgtagggct attttataaa
    15361 aagataaaga atctgaaata tcactcgata agatttaaac tttgaagtaa acgaaagtta
    15421 gttttatact aatcaagtta agtcaaatat aaattcaaaa taaagattat acataatatg
    15481 aataatgtga gataaagact gcaatgaaat ttaacgcgaa tgcgtatgca acttagaata
    15541 tgatgtcttt tactaataaa taaaaataat gaatcaagta taggataaat ataaaaggtg
    15601 atattgacat gacaagaaaa ggatatgggg aatcgacagg taagattatt ttaataggag
    15661 aacatgctgt tacatttgga gagcctgcta ttgcagtacc gtttaacgca ggtaaaatca
    15721 aagttttaat agaagcctta gagagcggga actattcgtc tattaaaagc gatgtttacg
    15781 atggtatgtt atatgatgcg cctgaccatc ttaagtcttt ggtgaaccgt tttgtagaat
    15841 taaataatat tacagagccg ctagcagtaa cgatccaaac gaatttacca ccatcacgtg
    15901 gattaggatc gagtgcagct gtcgcggttg cttttgttcg tgcaagttat gattttttag
    15961 ggaaatcatt aacgaaagaa gaactcattg aaaaggctaa ttgggcagag caaattgcac
    16021 atggtaaacc aagtggtatt gatacgcaaa cgattgtatc aggcaaacca gtttggttcc
    16081 aaaaaggtca tgctgaaacg ttgaaaacgt taagtttaga cggctatatg gttgttatag
    16141 atactggtgt gaaaggttca acaagacaag cagtagaaga tgttcataaa ctttgtgagg
    16201 accctcagta catgtcacat gtaaaacata tcggtaagtt agttttacgt gcgagtgatg
    16261 tgattgaaca tcataacttt gaagccttag cggatatttt taatgaatgt catgcggatt
    16321 taaaggcgtt gacagttagt catgataaaa tagaacaatt aatgaaaatt ggtaaagaaa
    16381 atggtgcgat tgctggaaaa cttactggcg ctggtcgtgg tggaagtatg ttattgcttg
    16441 ccaaagattt accaacagcg aaaaatattg taaaagctgt agaaaaagct ggtgcagcac
    16501 atacttggat tgagaattta ggaggttaat gcgttgatta aaagtggcaa agcacgtgca
    16561 catacgaata ttgcacttat aaaatattgg ggtaaaaaag atgaagcact aatcattcca
    16621 atgaataata gcatatctgt tacattagaa aaattttaca ctgaaacgaa agtcactttt
    16681 aacgaccagt taacacagga tcaattttgg ttgaatggtg aaaaggttag tggcaaagaa
    16741 ttagagaaaa tttcaaaata tatggatatt gtcagaaata gagctggcat cgattggtat
    16801 gcagaaattg aaagcgacaa ttttgtacca acagcagcag ggttggcttc atcggcaagc
    16861 gcatatgcag ctttagcagc agcttgtaat caagcgctag acatgcagct gtcagataag
    16921 gatttatcga gattggcgcg aattggttcg ggttctgcgt cgcgtagtat ttatggtgga
    16981 tttgcagaat gggaaaaagg gtatagtgat gagacgtcat atgccgttcc acttgaatcg
    17041 aatcattttg aagatgacct tgccatgata tttgttgtga ttaatcaaca ttctaaaaag
    17101 gtacctagtc gatatggtat gtcattgaca cgaaacacat caaggtttta tcaatattgg
    17161 ttagatcata ttgatgaaga tttagctgaa gcaaaagcag cgattcaaga caaagatttt
    17221 aaacgccttg gtgaagtaat tgaagaaaat ggtttgcgta tgcatgccac gaatctagga
    17281 tcaacaccgc cgttcacata tcttgtgcaa gaaagttatg atgtcatggc gcttgttcac
    17341 gaatgccgag aagcggggta tccgtgttat tttacaatgg atgcgggacc taatgtgaaa
    17401 atacttgtag aaaagaaaaa caagcaacag attatagata aattattaac acagtttgat
    17461 aataaccaaa ttattgatag tgacattatt gccacaggaa ttgaaataat tgagtaagga
    17521 agagataaaa tgattcaggt caaagcaccc ggaaaacttt atattgctgg agaatatgct
    17581 gtaacagaac caggatataa atctgtactt attgcgttag atcgttttgt aactgctact
    17641 attgaagaag cagaccaata taaaggtacc attcattcaa aagcattaca tcataaccca
    17701 gttacattta gtagagatga agatagtatt gtcatttcag atccacatgc agcaaaacaa
    17761 ttaaattatg tggtcacagc tattgaaata tttgaacaat acgcgaaaag ttgcgatata
    17821 gcgatgaagc attttcatct gactattgat agtaatttag atgattcaaa tggtcataaa
    17881 tatggattag gttcaagtgc agcagtactt gtgtcagtta taaaagtatt aaatgaattt
    17941 tatgatatga agttatctaa tttatacatt tataaactag cagtgattgc aaatatgaag
    18001 ttacaaagtt taagttcatg cggagatatt gctgtgagtg tatatagtgg atggctagcg
    18061 tatagtactt ttgatcatga atgggttaag catcaaattg aagatactac ggttgaagaa
    18121 gttttaatca aaaactggcc tggattgcac atcgaaccat tacaagcacc tgaaaatatg
    18181 gaagtactta tcggttggac tggctcaccg gcgtcatcac cacactttgt tagcgaagtg
    18241 aaacgtttga aatcagatcc ttcattttac ggtgacttct tagaagattc acatcgttgt
    18301 gttgaaaaac ttattcatgc ttttaaaaca aataacatta aaggtgtgca aaagatggtg
    18361 cgtcagaatc gtacaattat tcaacgtatg gataaagaag ctacagttga tatagaaact
    18421 gaaaagctaa aatatttgtg tgatattgct gaaaagtatc acggcgcatc taaaacatca
    18481 ggcgctggtg gtggagactg tggtattaca attatcaata aagatgtaga taaagaaaaa
    18541 atttatgatg aatggacaaa acatggtatt aaaccattaa aatttaatat ttatcatggg
    18601 caataaatga tttgataggg gagcaatcat ctaatttaat tagaagataa atgctccatt
    18661 ttttattgtc agccgtgtta cgtatcttga aaaaaatatt aaaaagagta aaatagatag
    18721 agttaacgaa aaaattaatg aaatcgacga tatagatatg ataaagaaag gtgggtagca
    18781 atatgaaaaa tacattcctt atttgtgatg aatgtcaggc agtcaatata agaacgttac
    18841 aaaagaagtt ggaaaaatta gatcccgatg ctgaaatcgt gataggttgt caatcttatt
    18901 gtggacctgg acgccgaaaa acattcactt ttgttaataa ccgcccactg gctgcgctta
    18961 ctgaagaaga attaatcgaa aaagtttctc aacaattaaa gaaaccacgt gatcctgaag
    19021 aagaagagcg tttaagaaaa cgacatgaag aacgtaaacg tcgtaaagaa gaacaagata
    19081 gaaagcttaa agaaaaatta gaaaagcgaa aagcacaaca ataaagcctg atggcagcat
    19141 cattcaatgc gtgccaccag gtttttatgt tttgtctaga aattaaataa atcattaaat
    19201 gattcggcca tcgtaggatg cgtataaata ttatctcgta atacggtata tggaatgttt
    19261 tgatcaatcg caagtttaat tatattaatt aattcttcag attgcttacc atataatgta
    19321 gcacctaaaa tcatattatt ttcattatta atgactactt taaataaacc tcttggatca
    19381 ttgttaattt tatgacgagg tatagcactt actaaaagtt gatgttcagt gtaatcataa
    19441 tgttgagcgg cagcttcttt actagttaat ccaacacgtg ataatggtgg atctataaat
    19501 actgtataag gcacgctgcc tctattgtca gtcgtacgtg actgattacc atataacgct
    19561 gatttgataa ttcgataatc atctaaagat atatacgtaa attgaagtcc gcctttaaca
    19621 tcacctgcag cataaatatg cggcacagtt gtttgaagat gagcattgac tttaatttcg
    19681 cctctgtcgc ctaattcgat atcagtattt tctaaagcta aatccgtatt cggtttgcgc
    19741 ccgatagcca aaagtactgc atcagcctca aagttaccaa cgttggtatg gactgttgta
    19801 tgatgattgt cagatgacaa ttcagtcgtt tcaacatttg tatgcaatgc aatgccttta
    19861 ttttctaagt cagtaatacc atatgcaacg acatcttgat cttcgcgtgg cataaatgat
    19921 tcgccacgtt ctaatactgt taccttacta cctaaattcg caaacattga agcaaattct
    19981 aaggcgatat aaccgccacc tacaataacg aggtgcttag gttgatagct aatgtttaat
    20041 aaacctgtcg aatcgaagac gtgtttagct tgatcaaggc ctttaatgtt aggaatgaca
    20101 gaggtagcac cggtattaat aatgatatga ggtgcagtaa tactatcgac gatatcgtca
    20161 tgttgatcta ataaattcac ttcagtatta gatttaaact gcgctttaaa atccagtaca
    20221 tcaatgttgt tatcgtctgc taataagtgg taatttttat tgtttagcgc attgacaaca
    20281 tcgtttttac ggttataact tgcttcaaaa gatttgcctt ctaatccatc atgtacaagt
    20341 gtcttcgaag gtatacatcc tatgtttata caagtgcctc catacatttt cggagattgt
    20401 tcgataactg cgacgtgttg acctgttgat gcagcgtatt tcgctaaagt tttaccagct
    20461 ttcccaaatc ctattacaat taaatcatat gttttcatga cataaatcct ccttttgaat
    20521 gtcttcaatg acatctttga ttgtttttcc attataaaaa ttaataatga tattctgttc
    20581 gtcttgctga taatgtgaca tggtagttgc aatattacga gcaatttgac agtgactgcc
    20641 ttcgtcgcca gtaaatagac gtgtgtggtg ttctttctct aagacaaaat gtttatataa
    20701 tgttgctaga gagacatcag cactttgatc atttgctaaa taaccgccat ctttacctcg
    20761 tattgtgtca atcattttta aatcgacaag ttgagtcgtc acgcgtcgta attgaacagg
    20821 atttaaacaa gttaattctg ctaatgaact actattgaat ttttctgaat gatgcttagt
    20881 taaaaaagct aatacatgca cggcaatgtt aaattctaaa ttcaatgttt ctcacctcat
    20941 aattgtaact gtattagtta caattaaaaa tcattttgct caatgtgtca atacttatgt
    21001 ttgaaaagtg ttgaattagg tgtggttatt gtgatgattt attgtttgaa agttgatgca
    21061 ttaacggtga gattgcacaa ttgaaatttt aattatgtat gaactgatag atatgaaatg
    21121 aatattgaaa atgagagcaa taaaattttg aatgatgatg ttgtgtgatt gtataaactt
    21181 attcgtattt tagatacgtt ttgatatttc gcatgatgag gaaatacttt taacaactga
    21241 tgacatattt taatagtgaa tatattttga gatattaata tatttaatgt taaggatgtt
    21301 gtcgcaataa aattaaaata ttgaaagata atttttattg attaattgcg aatatacaaa
    21361 gacaccatta tatccatatg ctaaaataag aaaaaaggcg acatgttatc tcaatttacc
    21421 tgcatctaga ctcctttaca taagaaataa tcatcgccga gttttaaaat tttacaactt
    21481 tgtagatgta aaaagcattt gattttaaat agtttgaaaa tcatatattt ttgaaaaagg
    21541 agcatgccga tgagtattga catgtattta gacagatctc gaaaccaagc ttcaagtgtg
    21601 gggaatttga gtcaaacaat gaattcaaat tatgatgcgt tggaaaaagc aattactcaa
    21661 tttattaatg atgatgcgct taaagggaaa gcgtatacgt cagctaagca attttttagt
    21721 acggtgttaa ttccattatc aacaagtatg aaaacattga gtgatttaac gaagcaagct
    21781 tgcgataatt ttgtgtcacg ttatacgagt gaggttgata gcatatcttt aaaagaatca
    21841 gagcttgaag aagatatcag atcattaagt caacaaatta cgcgatatga aaatttgaat
    21901 aacaatttga aaaagcatgc ttccgataat cagcaagcca tttcatcgaa ccaacaaata
    21961 atacgaacat taggtcaaca aaaacatgaa ttagaagaga agctacgcaa attgcgtgag
    22021 tttaatcaaa aatcaccaga aatatttaaa gaagttgaag aatttcaaaa aattgtccaa
    22081 caaggactta cccaagcgca gaatttttgg aacttttcaa caaatcaatt taatattcct
    22141 tcaggtaaag aacttgattg ggccaaagca agtcatgaaa aatatttgaa agttgctatg
    22201 gggaaaattg aacataaagc agagaaagaa actttaaata aagcagactt tgctgttata
    22261 aaggcatatg ccaaagaaca tccagaagac gatatcccga aaagtatatt gaaatatata
    22321 aatgacaata aagacagtat taaaagagat ataggattag atattacgtc aacactttta
    22381 gagcaaggcg gtataaatgc aagtaaattc ggtgtattta tcaatacagc aggtggagtg
    22441 aaaggcccag caggtccaaa ttcatttgtg gaagtcaaac gtacatcagg taatgtgttt
    22501 atagaaaatg gtagtaaatt tgcaaaaggc ggaaaatacc taggtaaagg tgttgctggt
    22561 gtaggatttg gtataggtat gtatgatgac cttgcaaatg atgataaaac atttggagag
    22621 gcgttgtcgc ataatggtat gacgcttgca gctggatctg cagggacagc agttggagct
    22681 ggattagcga cttttgtttt aggaagtaat ccagtaggat gggtgatttt agcaggtttg
    22741 gctatgagta cagtatttgc attaggaaca gatttaattt atcaaaataa tatttttgga
    22801 ttaaaagata aagtagactg ggtagggcat aaaatcgata atagtataga tgttgttaaa
    22861 aaaactacag aaaaatccat ggatagtgtt gggaatgctg ttagtgaagc taaaaatatt
    22921 attagcaatc atataaatcc aatgaaatgg gcgtggtgag ttttgctttt taatattaag
    22981 gttattaata aaaatccgag atataaagtc gttcaatata atgatgagta tttgttaatt
    23041 gatttagtaa gcacttggct tgtatacttt tttcctttta ttaattggtt cattcccaaa
    23101 aggtatgcaa aacttagtga gaaggaactt gaaaatttaa atgttgataa acaaaataaa
    23161 aataatattt tctggccagt tactggtagt tcgtttttat ttgtagttat tttacggaaa
    23221 tatgtacata cgtttgaagt tcaattagat aataagattt taatatcttt atgttttata
    23281 ggatttatag gtattgcagc attttacatt tacttaaata aaaagcttaa actaaagata
    23341 tatgatgata a
//
LOCUS       DALPQQ010000027        23351 bp    DNA     linear   BCT 22-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus strain K18-6-464
            SAMD00233528-rid16434743.denovo.027, whole genome shotgun sequence.
ACCESSION   DALPQQ010000027 DALPQQ010000000
VERSION     DALPQQ010000027.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMD00233528
            Sequence Read Archive: DRR236061
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 23351)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 23351)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001543423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001543423.1
            Genome Coverage       :: 77x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/22/2022 17:09:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,811
            CDSs (total)                      :: 2,743
            Genes (coding)                    :: 2,689
            CDSs (with protein)               :: 2,689
            Genes (RNA)                       :: 68
            rRNAs                             :: 2, 4, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 4, 2 (16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 54
            CDSs (without protein)            :: 54
            Pseudo Genes (ambiguous residues) :: 0 of 54
            Pseudo Genes (frameshifted)       :: 27 of 54
            Pseudo Genes (incomplete)         :: 27 of 54
            Pseudo Genes (internal stop)      :: 10 of 54
            Pseudo Genes (multiple problems)  :: 10 of 54
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..23351
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMD00233528-rid16434743.denovo.027"
                     /strain="K18-6-464"
                     /db_xref="taxon:1280"
                     /geo_loc_name="Japan: Niigata"
     gene            complement(115..1044)
                     /locus_tag="O7798_000944"
     CDS             complement(115..1044)
                     /locus_tag="O7798_000944"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001574632.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DMT family transporter"
                     /protein_id="HDC2863212.1"
                     /translation="MLLFYIIGVLVGMLIPIQTSVNSRLSLYTKSPFYTSFISFSVGT
                     ICLIILNIIINPEVFTIHFYNNQSFNYTWVVGGLLGVSFLTGNLLLLPKLGATLTVIA
                     TVAGQIIMGVIIDTFGLFGATIHDFNLIKAIGVLLLIVGIVIMNQFNKNNLLLTDQKY
                     LLFWLLLGFIFGFFPPIQTTINSALASHTHSPAFASLVSFTIGSIALLILTAIFNRSL
                     KLKTSHLKFGKLKPIYFTGGILGMAFVTANIILMPHMGAALTTLIGMFGQILMGILID
                     HFGLFGSPKIAMTSRKTIGLLCILTGIILLRLF"
     gene            complement(1239..1463)
                     /locus_tag="O7798_000945"
     CDS             complement(1239..1463)
                     /locus_tag="O7798_000945"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499185.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2922 domain-containing protein"
                     /protein_id="HDC2863213.1"
                     /translation="MTKTLELSFKSSLDKPVKLQLPQLNNVVTEQVARDSMNALVDLN
                     IIKSNSGTITKVHSAQIIDKTTTVLFEDKK"
     gene            complement(1480..1683)
                     /locus_tag="O7798_000946"
     CDS             complement(1480..1683)
                     /locus_tag="O7798_000946"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001837138.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1659 domain-containing protein"
                     /protein_id="HDC2863214.1"
                     /translation="MSKINHITIVLSFTKVDANGKQTEFKRRFANINPDASNDQIKTF
                     SKLIERLTGETYSNIELIKSLSI"
     gene            1842..2402
                     /locus_tag="O7798_000947"
     CDS             1842..2402
                     /locus_tag="O7798_000947"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499186.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine-type recombinase/integrase"
                     /protein_id="HDC2863215.1"
                     /translation="MNKVEAIKFNDDIVKMYEALKIKSERDYLFFKLAIHSGLKVSEL
                     LTITVSQVKRLIEKCTLSEMCKAHFHSLIKIRLPETLSKELLQYIEDRSLSNEDVLFQ
                     SLRTNQVLSRQQAYRIIHQASIEAGIDNVGLTTLRKTFAYHAYQKGIPIPVIQKYLGH
                     QSAIETLNFIGLENECEHSIYISLQL"
     gene            2421..4823
                     /gene="mnhA2"
                     /locus_tag="O7798_000948"
     CDS             2421..4823
                     /gene="mnhA2"
                     /locus_tag="O7798_000948"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499187.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Na+/H+ antiporter Mnh2 subunit A"
                     /protein_id="HDC2863216.1"
                     /translation="MSLVYLLIAILVIMAMILLMSKRRALAKYAGYIALVAPVISSIY
                     FLIQIPSVAKLQYLSTSIPWIKTLDINLDLRLDGLSLMFSLIISLIGIAVFFYATQYL
                     SSRKDNLPRFYFYLTLFMFSMIGIVLSDNTILMYIFWELTSVSSFLLISYWYNNGDSQ
                     FGAIQSFMITVFGGLALLVGFIMLYIMTGTNNITEILGQADHIKNHGLFIPMIFMFLL
                     GAFTKSAQFPFHIWLPRAMAAPTPVSAYLHSATMVKAGIFLLLRFTPLLGLSNMYVYI
                     VTFVGLITMLFGSITALKQWDLKGILAYSTISQLGMIMAMVGIGGGYAQHQQDAIASI
                     YVFVLFGALFHLMNHAIFKCALFMGVGILDHEAGSRDIRILSGMRQLFPKMNLVMTIA
                     ALSMAGVPFLNGFLSKEMFLDALTQTGQLSQFSLISMIAIVFVGVIASVFTFTYALYM
                     VKEVFWTKYDSKVFTKKNIHEPWLFSLPSLILMVLVPVIFFVPNIFGKGIIVLALRAV
                     SGGNHQIDQLAPHVSQWHGFNIPLLLTIIIILLGSVLAIKVDWKKVFTGKIRQISVSK
                     SYEMVYRHFEKFATKRFKRVMQDRLNQYIIMTLGIFMIIIGYGYIRIGLPKVHQLHVS
                     EFGALEIILAIVTVTIGISLIFIRQRLTMVILNGVIGFVVTLFFIAMKAPDLALTQLV
                     VETITTILFIVSFSRLPNVPRSNANKKREIIKISVSLLMALIVVSLIFITQQTDGLSS
                     ISDFYLKADKLTGGKNIVNAILGDFRALDTLFEGLVLIITGLGIYTLLNYQDRRGQDE
                     RE"
     gene            4810..5235
                     /gene="mnhB2"
                     /locus_tag="O7798_000949"
     CDS             4810..5235
                     /gene="mnhB2"
                     /locus_tag="O7798_000949"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499188.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Na+/H+ antiporter Mnh2 subunit B"
                     /protein_id="HDC2863217.1"
                     /translation="MKENDVVLRTVTKLVVFILLTFGFYVFFAGHNNPGGGFIGGLIF
                     SSAFILMFLAFNVEEVLESLPIDFRILMIIGTLVSSITAIIPMFFGKPFLSQYETTWI
                     LPILGQIHVSTITLFELGILFSVVGVIVTVMLSLSGGRS"
     gene            5232..5576
                     /gene="mnhC2"
                     /locus_tag="O7798_000950"
     CDS             5232..5576
                     /gene="mnhC2"
                     /locus_tag="O7798_000950"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499189.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Na+/H+ antiporter Mnh2 subunit C"
                     /protein_id="HDC2863218.1"
                     /translation="MNLILLLVIGFLVFIGTYMILSINLIRIVIGISIYTHAGNLIIM
                     SMGTYGSSRSEPLITGGNQLFVDPLLQAIVLTAIVIGFGMTAFLLVLVYRTYKVTKED
                     EIEGLRGEDDAK"
     gene            5566..7062
                     /gene="mnhD2"
                     /locus_tag="O7798_000951"
     CDS             5566..7062
                     /gene="mnhD2"
                     /locus_tag="O7798_000951"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499190.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Na+/H+ antiporter Mnh2 subunit D"
                     /protein_id="HDC2863219.1"
                     /translation="MLSNLLILPMLLPFLCALILVFLKNNDRISKYLYLGTMTITTII
                     SLMLLIYVQRHRPITLDFGGWSAPFGIQFLGDSLSLIMVTTASFVITLIMAYGFGRGE
                     HKANRYHLPSFILFLSVGVIGSFLTSDLFNLYVMFEIMLLASFVLITLGQSVEQLRAA
                     IIYVVLNIIGSWLFLLGIGLLYKTVGTLNFSHIAMRLNDMGENRTVTMISLIFLVAFS
                     AKAALVLFMWLPKAYAVLNTELAALFAALMTKVGAYALIRFFTLLFDQHNDLIHPLLA
                     TMAAITMVIGAIGVIAYKDIKKIAAYQVIISIGFIILGLGTNTFAGINGAIFYLVNDI
                     VVKTLLFFIIGSLVYITGYRQYQYLNGLAKKEPLFGVAFIIMIFAIGGVPPFSGFPGK
                     VLIFQGALQNGNYIGLALMIITSLIAMYSLFRILFYMYFGDKDGEEVNFKKIPLYRKR
                     ILSILVVVVIAIGIAAPVVLNVTSDATELNTSDQLYQKLVNPHLKGED"
     gene            7063..7545
                     /gene="mnhE2"
                     /locus_tag="O7798_000952"
     CDS             7063..7545
                     /gene="mnhE2"
                     /locus_tag="O7798_000952"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499191.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Na+/H+ antiporter Mnh2 subunit E"
                     /protein_id="HDC2863220.1"
                     /translation="MNQIVLNIIIAFLWVLFQDEDHFKFSTFFSGYLIGLIVIYILHR
                     FFSDDFYVRKIWVAIKFLGVYLYQLITSSISTINYILFKTKDMNPGLLSYETRLTSDW
                     SITFLTILIIITPGSTVIRISQDSKKFFIHSIDVSEKEKDSLLRSIKHYEDLILEVSR
                     "
     gene            7542..7844
                     /gene="mnhF2"
                     /locus_tag="O7798_000953"
     CDS             7542..7844
                     /gene="mnhF2"
                     /locus_tag="O7798_000953"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000616642.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Na+/H+ antiporter Mnh2 subunit F"
                     /protein_id="HDC2863221.1"
                     /translation="MIQTITHIMIISSLIIFGIALIICLFRLIKGPTTADRVVTFDTT
                     SAVVMSIVGVLSVLMGTVSFLDSIMLIAIISFVSSVSISRFIGGGHVFNGNNKRNL"
     gene            7819..8256
                     /gene="mnhG2"
                     /locus_tag="O7798_000954"
     CDS             7819..8256
                     /gene="mnhG2"
                     /locus_tag="O7798_000954"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001566533.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Na+/H+ antiporter Mnh2 subunit G"
                     /protein_id="HDC2863222.1"
                     /translation="MEITKEIFSLIAAVMLLLGSFIALISAIGIVKFQDVFLRSHAAT
                     KSSTLSVLLTLIGVLIYFIVNTGFFSVRLLLSLVFINLTSPVGMHLVARAAYRNGAYM
                     YRKNDAHTHASILLSSNEQNSTEALQLRAEKREEHRKKWYQND"
     gene            8596..10638
                     /locus_tag="O7798_000955"
     CDS             8596..10638
                     /locus_tag="O7798_000955"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002465267.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sodium:proton antiporter"
                     /protein_id="HDC2863223.1"
                     /translation="MEIFETILIFIAVVILSSFVHTFIPKVPLAFIQIFLGMLLFITP
                     IPVQFNFDSELFMVTMIAPLLFVEGVNVSRVHLRKYIKPVMMMALGLVITTVIGVGLF
                     IHWIWPDLPIGAAFAIAAILCPTDAVAVQAITKGKVLPKGAMTILEGESLLNDAAGII
                     SFKIAVGVLVTGAFSLVDAVQLFLIASIGGAVVGLLIGMALVRFRLTLMRRGYENINM
                     FTIIQLLTPFVTYLIAELFHASGIIAAVVAGLVHGFERDRIMQVRTQLQMSYNHTWNI
                     LGYVLNGFVFSILGFLVPEVIIKIIKTEPHNLIFLIGITIVVALAVYLFRFVWVYVLY
                     PYFYLAISPFQKMMTKNDDDNPTTEKPPKRSLYALIMTLCGVHGTISLAIALTLPYFL
                     AGHHAFTYRNDLLFIASGMVIISLVVAQVLLPLLTKPAPKTVIGNMSFKVARIYILEQ
                     VIDYLNQKSTFETSFKYGNVIKEYHDKLAFLKTVEKDDENSKELERLQKIAFNVETKT
                     LESLVDEGQITNSVLENYMRYAERTQVYRQASLIRRMIVLLRGALLKRRVQTRVNSAS
                     SLSVTDNLMELNKINKLVHYNVVSRLSKETTKDNTLEVGMVCDGYLMRIENLTPSNFF
                     NSASEDTITKIKLNALREQRRILRELIDTDEVSEGTALKLREAINYDEMVIVDSMT"
     gene            complement(11798..12727)
                     /locus_tag="O7798_000956"
     CDS             complement(11798..12727)
                     /locus_tag="O7798_000956"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499195.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metal ABC transporter substrate-binding protein"
                     /protein_id="HDC2863224.1"
                     /translation="MKKLVPLLLALLLLVAACGTGGKQSSDKSNGKLKVVTTNSILYD
                     MAKNVGGDNVDIHSIVPVGQDPHEYEVKPKDIKKLTDADVILYNGLNLETGNGWFEKA
                     LEQAGKSLKDKKVIAVSKDVKPIYLNGEEGNKDKQDPHAWLSLDNGIKYVKTIQQTFI
                     DNDKKHKADYEKQGNKYIAQLEKLNNDSKDKFNDIPKEQRAMITSEGAFKYFSKQYGI
                     TPGYIWEINTEKQGTPEQMRQAIEFVKKHKLKHLLVETSVDKKAMESLSEETKKDIFG
                     EVYTDSIGKEGTKGDSYYKMMKSNIETVHGSMK"
     gene            complement(12724..13560)
                     /locus_tag="O7798_000957"
     CDS             complement(12724..13560)
                     /locus_tag="O7798_000957"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499196.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metal ABC transporter permease"
                     /protein_id="HDC2863225.1"
                     /translation="MLEFVEHLFTYQFLNRALITSIIVGIVCGTVGSLIVLRGLSLMG
                     DAMSHAVLPGVALSFLFGIPMFVGALITGMIASIFIGYITSSSKTKPDAAIGISFTAF
                     LASGIIIISLINTTTDLYHILFGNLLAITNSAFLTTIVIGSIVLILIIIFYRPLMIST
                     FDPTFSRMSGLNTTLLHYFVMLLLSLVTVASIQTVGIILVVALLITPASTAFLISKKL
                     YSMMIIASLISVISSIVGLYYSYIYNIPSGATIVLCTFVIYIITLFFTKFTNRKKRGS
                     LT"
     gene            complement(13554..14297)
                     /locus_tag="O7798_000958"
     CDS             complement(13554..14297)
                     /locus_tag="O7798_000958"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499197.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metal ABC transporter ATP-binding protein"
                     /protein_id="HDC2863226.1"
                     /translation="MLETKDLNLFLGNKHVLKNISLSIPVRGEIIGIMGPNGAGKSSL
                     IKSLIGEFNATGTKLLYNKPIQQQLQHITYIPQKAHIDLDFPISVEQVILSGCYKEIG
                     WFRRPNKSARDKLKQLLSDLELESLRHRQISELSGGQLQRVLVARALMSESEVYFLDE
                     PFVGIDFSSEKLIMTKIENLKQQGKLILIIHHDLSKAKQYFDRIILLNQTLRYFGDSE
                     EAMSVTRLNETFMSSTDCSDPSQRSNITC"
     gene            14419..15063
                     /locus_tag="O7798_000959"
     CDS             14419..15063
                     /locus_tag="O7798_000959"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499198.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metal-dependent transcriptional regulator"
                     /protein_id="HDC2863227.1"
                     /translation="MLTEEKEDYLKAILTNNGDKNFVTNKILSQFLNIKPPSVSEMVG
                     RLEKAGYVETKPYKGVRLTEDGLTHTLDIIKRHRLLELFLIEILKYNWEEVHQEAEIL
                     EHRISDLFVERLDSLLNFPETCPHGGVIPRNNEYKEKYITTILNYEPGDIVTIKRVRD
                     KTDLLIYLSSKDISIGNEVEIVSKDEMNKVIIIKRNDNVIIVSYENAMNMFAEK"
     gene            complement(15143..15895)
                     /locus_tag="O7798_000960"
     CDS             complement(15143..15895)
                     /locus_tag="O7798_000960"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499199.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M50 family metallopeptidase"
                     /protein_id="HDC2863228.1"
                     /translation="MNYLSNFFNTTIQLNIYIIVIVAACYIAIHQYRHKPVLNYLDVI
                     LNYIPVLTHEFGHVLFNKLAGGRAKDLVIVTSPRERQQTLQQGFAITQSRHLAGQWLT
                     TIGGYFMPPIMLLIGLASSHYQIPSFFIFTYLLIFIYFLILTSRKGSPIVVITLISIM
                     LYFILKDENIVEIQLLVTMSYQYILGVLLGEVLQSSWTIAKLTFQRPSPQWDGSALKE
                     LSHVPIFIYSTIWIIFNLYAVNILLKYTHLIN"
     gene            16131..16895
                     /locus_tag="O7798_000961"
     CDS             16131..16895
                     /locus_tag="O7798_000961"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499200.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="WecB/TagA/CpsF family glycosyltransferase"
                     /protein_id="HDC2863229.1"
                     /translation="MTVEERSNTAKVDILGVDFDNTTMLQMVENIKTFFANQSTNNLF
                     IVTANPEIVNYATTHQAYLELINQASYIVADGTGVVKASYRLKQPLAHRIPGIELMDE
                     CLKIAHVNHQKVFLLGATNEVVEAAQYALQQRYPNISFAHHHGYIDLEDETVVKRIKL
                     FKPDYIFVGMGFPKQEEWIMTHENQFESTVMMGVGGSLEVFAGAKKRAPYIFRKLNIE
                     WIYRALIDWKRIGRLKSIPIFMYKIAKAKRKIKKAK"
     gene            complement(16956..17750)
                     /gene="tagH"
                     /locus_tag="O7798_000962"
     CDS             complement(16956..17750)
                     /gene="tagH"
                     /locus_tag="O7798_000962"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499201.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="teichoic acids export ABC transporter
                     ATP-binding subunit TagH"
                     /protein_id="HDC2863230.1"
                     /translation="MNVSVNIKNVTKEYRIYRTNKERMKDALIPKHKNKTFFALDDIS
                     LKAYEGDVIGLVGINGSGKSTLSNIIGGSLSPTVGKVDRNGEVSVIAISAGLSGQLTG
                     IENIEFKMLCMGFKRKEIKAMTPKIIEFSELGEFIYQPVKKYSSGMRAKLGFSINITV
                     NPDILVIDEALSVGDQTFAQKCLDKIYEFKEQNKTIFFVSHNLGQVRQFCTKIAWIEG
                     GKLKDYGELDDVLPKYEAFLNDFKKKSKAEQKEFRNKLDESRFVIK"
     gene            18097..18909
                     /gene="tagG"
                     /locus_tag="O7798_000963"
     CDS             18097..18909
                     /gene="tagG"
                     /locus_tag="O7798_000963"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499202.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="teichoic acids export ABC transporter permease
                     subunit TagG"
                     /protein_id="HDC2863231.1"
                     /translation="MSAIGTVFKEHVKNFYLIQRLAQFQVKIINHSNYLGVAWELINP
                     VMQIMVYWMVFGLGIRSNAPIHGVPFVYWLLVGISMWFFINQGILEGTKAITQKFNQV
                     SKMNFPLSIIPTYIVTSRFYGHLGLLLLVIIACMFTGIYPSIHIIQLLIYVPFCFFLT
                     ASVTLLTSTLGVLVRDTQMLMQAILRILFYFSPILWLPKNHGISGLIHEMMKYNPVYF
                     IAESYRAAILYHEWYFMDHWKLMLYNFGIVAIFFAIGAYLHMKYRDQFADFL"
     gene            19008..20111
                     /locus_tag="O7798_000964"
     CDS             19008..20111
                     /locus_tag="O7798_000964"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499203.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CDP-glycerol glycerophosphotransferase family
                     protein"
                     /protein_id="HDC2863232.1"
                     /translation="MNVLIKKFYHLVVRILSKMITPQVIDKPHIVFMMTFPEDIKPII
                     KALNNSSYQKTVLTTPKQAPYLSELSDDVDVIEMTNRTLVKQIKALKSAQMIIIDNYY
                     LLLGGYNKTSNQHIVQTWHASGALKNFGLTDHQVDVSDKAMVQQYRKVYQATDFYLVG
                     CEQMSQCFKQSLGATEEQMLYFGLPRINKYYTADRATVKAELKDKYGITNKLVLYVPT
                     YREDKADNRAIDKAYFEKCLPGYTLINKLHPSIEDSDIDDVSSIDTSTLMLMSDIIIS
                     DYSSLPIEASLLDIPTIFYVYDEGTYDQVRGLNQFYKAIPDSYKVYTEEDLIMTIQEK
                     EHLLSPLFKDWHKYNTDKSLHQLTEYIDKMVTK"
     gene            20108..21169
                     /locus_tag="O7798_000965"
     CDS             20108..21169
                     /locus_tag="O7798_000965"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499204.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 2 protein"
                     /protein_id="HDC2863233.1"
                     /translation="MRFTIIIPTCNNEATIRQLLISIESKEHYRILCIDGGSTDQTIP
                     MIERLQRELKHISLIQLQNASIATCINKGLMDIKMTDPHDSDAFMVIKPTSIVLPGKL
                     DRLTAAFKNNDNIDMVIGQRAYNYHGEWKLKSADEFIKDNRIVTLTEQPDLLSMMSFD
                     GKLFSAKFAELQCDETLANTYNHAILVKAMQKATDIHLVSQMIVGDNDIDTHATSNDE
                     DFNRYITEIMKIRQRVMEMLLLPEQRLLYSDMVDRILFNNSLKYYMNEHPAVTHTTIQ
                     LVKDYIMSMQHSDYVSQNMFDIINTVEFIGENWDREIYELWRQTLIQVGINRPTYKKF
                     LIQLKGRKFAHRTKSMLKR"
     gene            21232..21630
                     /gene="tagD"
                     /locus_tag="O7798_000966"
     CDS             21232..21630
                     /gene="tagD"
                     /locus_tag="O7798_000966"
                     /EC_number="2.7.7.39"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499205.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycerol-3-phosphate cytidylyltransferase"
                     /protein_id="HDC2863234.1"
                     /translation="MKRVITYGTYDLLHYGHIELLRRAREMGDYLIVALSTDEFNQIK
                     HKKSYYDYEQRKMMLESIRYVDLVIPEKGWGQKEDDVEKFDVDVFVMGHDWEGEFDFL
                     KDKCEVIYLKRTEGISTTKIKQELYGKDAK"
     gene            complement(21747..23042)
                     /gene="pbp4"
                     /locus_tag="O7798_000967"
     CDS             complement(21747..23042)
                     /gene="pbp4"
                     /locus_tag="O7798_000967"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499206.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="penicillin-binding protein PBP4"
                     /protein_id="HDC2863235.1"
                     /translation="MKNLISIIIILCLTLSIMTPYAQATNSDVTPVQAANQYGYAGLS
                     AAYEPTSAVNVSQTGQLLYQYNIDTKWNPASMTKLMTMYLTLEAVNKGQLSLDDTVTM
                     TNKEYIMSTLPELSNTKLYPGQVWTIADLLQITVSNSSNAAALILAKKVSKNTSDFVD
                     LMNNKAKAIGMKNTHFVNPTGAENSRLRTFAPTKYKDQERTVTTARDYAILDLHVIKE
                     TPKILDFTKQLAPTTHAVTYYTFNFSLEGAKMSLPGTDGLKTGSSDTANYNHTITTKR
                     GKFRINQVIMGAGDYKNLGGEKQRNMMGNALMERSFDQYKYVKILSKGEQRINGKKYY
                     VENDLYDVLPSDFSKKDYKLVVEDGKVHADYPREFINKDYGPPTVEVHQPIIQKANTV
                     AKSMWEEHPLFTIIGGTCLVAGLALIVHMIINRLFRKRK"
BASE COUNT         7876 a         3400 c         3973 g         8102 t
ORIGIN      
        1 gtgtcaaagc atactaccca aatcaacgct tttctaaaga tttttagacc acaaaaaaat
       61 agcttatcac ttttaaaaat aattacaagt taaaatgata agctaaaagt taatttaaaa
      121 taatcttaaa agtataatgc ctgtcaaaat acataataga ccaatagttt ttctggatgt
      181 cattgctatt ttaggtgaac caaataatcc aaagtgatct atcaatatgc ccattagaat
      241 ctggccaaac atcccaataa gtgttgttaa tgctgcaccc atatgaggca ttaagataat
      301 gttagctgtt acaaaagcca tgccaagtat accgccagta aaatagatag gctttaattt
      361 accgaatttt aaatgacttg tttttagttt taaagaacga ttaaaaatag cggttaaaat
      421 caatagcgct attgacccaa ttgtaaatga tactaatgat gcaaaggctg gtgaatgagt
      481 atgactagct aaagcactat taattgtcgt ttgaataggt ggaaagaaac caaaaataaa
      541 tcctaataga agccaaaaca gtaaatactt ttgatcagtt agtaataaat tattcttgtt
      601 aaattgattc attatgacga tgccgacaat gagtaacaat actccaattg ctttaattaa
      661 attaaaatca tgaattgtag cgccaaataa tccaaatgta tcaataatga cacccataat
      721 aatttgaccc gcaactgttg caattacagt taatgttgca cctaattttg gcaataacaa
      781 taaattgcca gttaaaaagc taaccccaag caaaccaccg actacccatg tgtagttaaa
      841 tgattgatta ttgtaaaagt gaatagtaaa tacttctgga ttgataatga tatttaaaat
      901 aattaaacaa attgttccaa ctgaaaatga aatgaatgaa gtatagaaag gcgatttagt
      961 atacagtgat agtcttgaat tgacagatgt ttggatagga ataagcattc caactaggac
     1021 accaatgata tagaaaagaa gcatatgaat aaagtctcac tttccaaagt taataataaa
     1081 atcatatatt tacattatca ttatagagaa aatatacaac tcatttacaa taatgttgaa
     1141 aaaaacagga cattattaca acaaaatcac cctagacaat catgatgaaa gtctagggtg
     1201 ttagtattta tactaaatta attgcgcttt ctttatatct atttcttatc ttcaaataaa
     1261 acagttgttg ttttatcaat aatttgagca gaatgtactt tggtgatagt accactattt
     1321 gactttataa tatttaaatc tactaatgca ttcatactat cacgtgcaac ttgctcggtc
     1381 actacgttgt ttaattgtgg taattgcagt tttacaggct tgtctagtga agatttaaaa
     1441 cttaattcaa gtgttttagt catgaatatg tcctcctgat taaattgata aagatttgat
     1501 gagttcgata ttgctatatg tttctccagt aagtcgctca ataagtttgc tgaatgtttt
     1561 aatttggtcg tttgatgcat cagggttaat gttagcgaat cgacgcttaa attctgtttg
     1621 tttgccgtta gcgtctactt tagtaaatga taatacaata gtgatgtggt ttattttact
     1681 catattttaa aacctccttt cacactatat atcgaaacaa aataataaaa tggctaattt
     1741 tattttctat gtttaaaatc tataaaaaag gcaatagata tatgtaacta aaatataata
     1801 tagctatgat taagacactt aaagcaaggg gaggttgagt aatgaataaa gtagaagcga
     1861 ttaaatttaa tgatgatatt gttaaaatgt atgaagcgct caagataaaa tctgaacgtg
     1921 actatttatt ctttaagtta gctatacata gtggattgaa agtatcagaa ttattaacaa
     1981 ttacagtctc tcaagttaag agactaattg aaaagtgtac gttatcagaa atgtgtaaag
     2041 cacattttca ttcgttgatt aaaattaggt taccagaaac attatcgaaa gaactacttc
     2101 aatatataga ggacaggagt ctttcgaatg aagacgttct ttttcaatca ctacgaacaa
     2161 atcaagtatt atctagacag caagcatatc gaataattca ccaagcatca attgaagctg
     2221 gtatagataa tgtaggacta acgacattgc gtaagacatt tgcatatcat gcttatcaaa
     2281 aaggtatacc tataccagtc attcaaaagt atttagggca tcaatctgct attgaaacac
     2341 taaattttat cggtttagaa aatgagtgtg aacatagtat ttatatttca ttacaattat
     2401 agaaacaaag gaggctaata atgagtttgg tttatttatt aattgctata cttgtgatta
     2461 tggcgatgat acttctaatg tctaaacgta gagcattggc taaatatgcc gggtacatag
     2521 cgttggttgc acctgtaatt tcatctatct attttttgat tcaaatacca tcagtagcta
     2581 aactgcaata tctttctacc tctattccat ggattaagac attagatatt aatttagatt
     2641 tacgtttaga tggtttaagt ttaatgtttt ctcttattat ttcacttatt ggaattgcag
     2701 tattcttcta tgcaactcaa tatttatcct ctcgaaaaga caatttacca aggttttatt
     2761 tttatttaac gttatttatg ttcagtatga ttggtattgt attatcagac aatacgatat
     2821 tgatgtacat tttttgggaa ttaacgagtg tatcatcatt tttattgatt tcatattggt
     2881 ataacaatgg tgacagtcaa tttggtgcga ttcaatcatt tatgattaca gtatttggtg
     2941 gattggcgtt attagttggt tttattatgc tgtatatcat gacaggaacg aataacatca
     3001 cagagatatt aggacaagca gatcatatta agaatcatgg attgtttatc cctatgattt
     3061 ttatgttttt attaggtgca tttacaaaat cagcacaatt tccatttcat atttggctac
     3121 ctagagcaat ggctgcacct acacctgtaa gtgcttattt acattcagcc acgatggtaa
     3181 aagctggtat ctttttatta cttcgattta caccattatt aggtcttagc aatatgtacg
     3241 tatatatcgt tacgtttgtt ggtttaataa caatgttatt tggttcaatt acagctttaa
     3301 aacaatggga tttaaaaggt atcctagcgt actctacaat cagtcaactt gggatgatta
     3361 tggctatggt gggtataggt ggcggatatg ctcaacacca acaagacgca atagcatcta
     3421 tttatgtatt tgtattattt ggtgcgctat ttcatctaat gaatcatgcc atctttaaat
     3481 gtgcgctttt catgggagta ggtattttag atcatgaagc aggttcaagg gatatacgaa
     3541 ttttaagtgg aatgcgtcaa ctatttccta aaatgaatct agtcatgacg atagcggctc
     3601 tatctatggc tggagtacca tttttaaatg gatttttaag taaagaaatg tttttagatg
     3661 cattaacaca aactggacaa ttatcccaat ttagtttgat ttcaatgata gctatcgtgt
     3721 ttgttggtgt tattgcgagt gtttttacat tcacatatgc actatacatg gtaaaagaag
     3781 tattttggac aaaatatgat tctaaggttt ttactaaaaa aaatatccac gaaccatggt
     3841 tgtttagttt accatctctt atattaatgg tgctagtacc tgtaatcttt tttgtaccaa
     3901 atatatttgg gaaggggatt atcgttctag cattaagagc tgtatcaggt ggtaatcatc
     3961 aaattgatca attggcacca catgtttcgc aatggcatgg atttaacata ccgcttcttt
     4021 taaccatcat cattatttta ttgggtagtg tactagcaat caaagtagat tggaaaaaag
     4081 tgttcacagg taaaattaga cagatttcag tttcaaaaag ctatgagatg gtatatcgac
     4141 attttgaaaa gtttgctacg aagcgattta aacgtgttat gcaagatcgt ttaaaccaat
     4201 acattattat gaccttaggc atatttatga ttatcattgg atatggttat attcgaattg
     4261 gacttcctaa agtacatcag ttacatgttt ctgaatttgg ggcattagaa attatattag
     4321 caatcgtaac tgtcacaatt ggtatttctt taatttttat acgtcaacga ctgacaatgg
     4381 tcattttaaa tggagtcatc ggatttgttg tgaccttatt ctttatagca atgaaagccc
     4441 ctgatctagc attgactcag ctagtagttg aaacaataac gacgatacta tttattgtca
     4501 gtttttcaag attaccaaac gtgccaagat ctaacgctaa caaaaaaaga gaaataatta
     4561 aaatttctgt atcactcttg atggcactta ttgttgtatc attaattttt attacacaac
     4621 aaacagatgg tttatcatca atatcagact tttatttaaa agctgacaaa ctaacaggtg
     4681 gtaaaaatat tgtaaatgcg atacttggtg actttagagc attagataca ttatttgaag
     4741 gattagtgtt aattattact gggctaggta tttacacatt attaaattat caagatcgga
     4801 ggggacaaga tgaaagagaa tgatgtcgtg ttaagaacgg tcacgaaact tgttgtattt
     4861 attttattga ctttcggatt ctatgtcttc ttcgcaggtc ataataatcc tggtggtggg
     4921 tttattggtg gtttaatatt tagttcagcg tttattttaa tgtttctggc ttttaatgtt
     4981 gaagaggttt tagaaagttt accgattgat tttagaattt taatgattat tggaacattg
     5041 gtatcatcta ttactgcgat aatacctatg ttttttggaa aaccattttt gtctcaatat
     5101 gaaacaactt ggatacttcc aattttagga caaattcatg taagtacaat aacacttttt
     5161 gaattaggta ttttattctc agttgttggt gttattgtca cagtgatgtt gtcgcttagc
     5221 ggaggtcgat catgaattta atattattac tagttatagg atttttagtg tttataggaa
     5281 catatatgat tttatcaatc aatttaattc gtattgtaat cggaatttca atatatactc
     5341 atgctggtaa tctcattatt atgagtatgg gaacgtatgg ttctagtaga tcagaaccac
     5401 taataactgg tggaaaccaa ttgtttgttg atcccttgtt acaagctatt gtactaactg
     5461 caatagttat agggtttggg atgactgcgt ttttacttgt acttgtttat agaacttata
     5521 aagtaacaaa agaagatgaa attgaaggcc taagggggga agatgatgct aagtaactta
     5581 ttgattttac caatgttatt accattcctt tgtgccttaa tccttgtatt tttaaaaaat
     5641 aatgatcgta tttctaaata tttatactta ggtacaatga ctatcaccac aattatttca
     5701 ttaatgctat taatttatgt tcagcgtcac cgtccaatta cgctagactt tggaggatgg
     5761 tcagcgccct ttggtataca gtttttagga gattctttaa gtttaattat ggttacaacc
     5821 gcttcgtttg tgattacttt aattatggca tacggatttg ggcgtggcga acataaagca
     5881 aatcgttatc acttgccatc gttcatatta tttttaagtg ttggcgtgat aggctctttt
     5941 ctaacatcag atttatttaa tttatacgtc atgtttgaaa ttatgttact agcgtcattt
     6001 gtactcatta cacttggaca atctgtagaa caattacgtg ctgcaattat ttatgttgtc
     6061 ttgaatatta ttggttcatg gctattctta ttaggtatag gtttacttta taaaacagta
     6121 ggtacattaa acttttcaca tattgcaatg cgtttgaatg acatgggaga aaatcgcact
     6181 gttacaatga tttcattaat cttcttagtc gcatttagtg cgaaagcagc gctggtcctt
     6241 tttatgtggc tacccaaagc ctacgctgtg ttaaatactg agcttgcagc attatttgca
     6301 gcgttaatga ccaaagtagg ggcctatgca ttaattcgat tcttcacttt actatttgat
     6361 caacataatg atctcataca tccattgcta gcaactatgg ctgctataac tatggtcatc
     6421 ggcgctatag gtgtcattgc ttataaagat attaaaaaga ttgcagctta ccaagtcata
     6481 atctcaatag gatttatcat tttaggttta ggaacaaaca cgtttgcagg tattaatggt
     6541 gcaatatttt atttggtaaa tgacattgtt gtaaaaacat tgctattttt tattattggt
     6601 agtttagttt acattacagg ctatcgacaa tatcaatatt tgaatggctt agctaaaaaa
     6661 gaacctttat ttggagttgc gtttattata atgatttttg ctattggcgg cgtgcctcca
     6721 tttagtggct ttccggggaa agtacttatt ttccaaggtg cattgcaaaa tggcaattat
     6781 attggactag cgttaatgat tattactagt ctaattgcaa tgtacagttt atttaggata
     6841 cttttttata tgtattttgg agataaagat ggggaggaag ttaattttaa gaaaatcccg
     6901 ctatatcgaa aaagaatttt aagtatttta gtagttgtgg ttatcgcaat cggaattgct
     6961 gcacctgttg tgttaaatgt tacaagtgat gcaactgagt tgaacacgag tgatcaatta
     7021 tatcaaaaac ttgtaaatcc gcatttgaaa ggagaggact aaatgaatca aatagtttta
     7081 aatattatca ttgcattctt atgggtatta tttcaagatg aagatcattt taaattctcg
     7141 actttctttt ctggatatct aattggttta attgtcattt atatattaca caggtttttc
     7201 agcgatgatt tttatgttag aaaaatatgg gtagctatta aatttttagg tgtttattta
     7261 tatcaattaa taacatctag cattagcacg attaattata ttctttttaa aacaaaagat
     7321 atgaaccctg gattactttc atatgaaaca agactaacaa gtgattggtc aataacattt
     7381 ttaacaattt taattattat aactccaggg tctacagtaa tacgaatttc tcaagactct
     7441 aaaaagtttt ttattcatag tatcgacgtg tcagaaaaag aaaaagatag tttgttaaga
     7501 agtattaagc attatgaaga cttaatattg gaggtgtcgc gatgatacaa acaataacac
     7561 atattatgat tattagttca ctcattattt ttggaattgc attaatcatc tgtttattta
     7621 gattaatcaa gggacctaca acagcagatc gtgtcgttac atttgataca acaagtgctg
     7681 tagtaatgtc aattgtgggt gtgttaagtg tacttatggg caccgtttct ttcttagatt
     7741 caatcatgct cattgccatt atatcttttg taagttctgt ttcaatatca cgctttattg
     7801 gtggggggca tgtgtttaat ggaaataaca aaagaaatct ttagtcttat tgctgctgtg
     7861 atgttgttgt taggtagttt tattgctctt attagtgcaa taggtatcgt gaaattccaa
     7921 gatgttttct taagaagtca cgctgcgaca aaaagttcaa ctttatccgt gttattaact
     7981 ttaatcggtg tattaattta ttttattgtg aatacaggat ttttcagtgt gcgtttatta
     8041 ctgtcacttg tttttattaa tttaacttca ccagtcggca tgcacttagt cgctcgcgct
     8101 gcttatcgca acggcgctta tatgtatcga aaaaatgatg ctcacacaca tgcatcaata
     8161 ttattaagtt caaatgaaca aaactctaca gaagcattac aattacgtgc tgaaaaacga
     8221 gaagagcatc gtaagaaatg gtatcaaaac gattgaagtg ttggctaaat tgttaagcat
     8281 aacaatgctt ttgaaaatct gttttcaaaa ttaatcatta aaagagtact ttgaaattgg
     8341 ttagtcgatt ttaaggtgct cattttttgt attataagtt aatgttgtta tgtgaaagca
     8401 agttgtttat ttatacaaac aattagtgat aaaataaaat taaataattg caaatttaag
     8461 tactgcaatc gtagacatat atctatatta aagtgctttt gtggtcgcta actcaattta
     8521 tcctctaaag tataattaca acgagatgtg atacttaatt ttcaattaaa caatactttt
     8581 tagagaggtg aaagtttgga aatatttgaa acaattctta tatttatagc tgttgtgata
     8641 ctaagttcgt ttgtccatac tttcatacct aaagtacccc tagcatttat acaaattttc
     8701 ttgggcatgt tactatttat taccccaatc cctgttcaat ttaattttga ttctgaattg
     8761 tttatggtaa caatgattgc gcctttgtta tttgtagaag gtgttaatgt ttctagagtc
     8821 catttaagga aatatattaa gccagtgatg atgatggcat taggattagt cattactact
     8881 gtgataggtg taggtttatt tattcattgg atttggccag atttacctat tggagcagca
     8941 tttgcaattg ctgccattct ttgtcctact gatgcagtag cagtgcaagc aatcactaaa
     9001 ggaaaggtct tgccaaaagg agcaatgaca attcttgaag gtgagtcatt attgaatgat
     9061 gctgctggta ttatttcatt taaaatagct gttggagtat tagttacagg tgctttttca
     9121 cttgttgatg ctgttcagtt gtttttaatt gcatcaattg gtggcgcagt ggttggttta
     9181 cttataggta tggcattagt aaggttccga ttaacattga tgcgtcgagg atatgaaaac
     9241 attaatatgt ttacaattat tcaattgtta acaccatttg ttacgtattt aattgctgaa
     9301 ttgtttcacg catcaggaat cattgcagca gtagttgcag gacttgtaca tggtttcgaa
     9361 cgtgacagaa ttatgcaagt acgtacacaa ctgcaaatga gttacaatca tacatggaat
     9421 atactaggtt atgttttaaa tggctttgtt ttttcaatat taggattttt agtacctgaa
     9481 gttattatta aaattatcaa aacagaaccg cacaatttaa tctttttaat aggcatcact
     9541 attgttgttg ctttagctgt ctatctattt agatttgttt gggtttatgt cttatatcct
     9601 tatttttatt tagccatcag tccattccaa aaaatgatga ctaaaaatga tgatgataat
     9661 ccaacgactg agaaaccacc aaagcgaagt ttatacgctt taattatgac gttatgtggt
     9721 gtgcatggaa caatttcttt agcaatcgca ttaacgttac cgtatttttt agcagggcat
     9781 catgctttta cgtatagaaa tgacttatta tttattgcat ctggtatggt tattattagt
     9841 ttggtagttg cgcaagtatt attgccatta ttaacgaaac ctgcacctaa aacagtaatt
     9901 ggcaatatgt cgtttaaagt tgctagaatt tatatattag aacaagttat tgattatcta
     9961 aatcaaaaat ctactttcga aacaagtttt aaatatggta acgtgattaa agaatatcat
    10021 gataaattag catttttaaa aactgtagag aaagatgatg aaaactctaa agaattagaa
    10081 cgtctacaaa aaattgcttt taatgtagaa acaaaaacat tagagtcttt agtagatgaa
    10141 ggacaaataa cgaatagtgt acttgaaaac tatatgcgtt atgctgaaag aacacaggta
    10201 tatagacaag catcattaat aagaagaatg attgtattat tacgaggtgc tttattaaaa
    10261 cgaagagtac aaacgagagt gaactccgca tcttcactta gtgttacgga taacttaatg
    10321 gaattaaata aaattaataa attagtccat tataatgtgg ttagtcgttt gtctaaggaa
    10381 acaacaaaag ataatacact tgaagttgga atggtttgtg acggttattt aatgcgaatt
    10441 gaaaacttaa caccatcaaa tttcttcaac tcagcaagtg aagatacgat tactaaaatt
    10501 aaattaaatg cattgagaga acaacgtcgc attttacgtg agttgattga tacagatgaa
    10561 gtatcagaag gtacagcgtt aaaactaaga gaagccatca attatgatga aatggttatt
    10621 gtagatagta tgacgtagtt cctaattatg ctaaaaggga ttgatgaaaa actgaagggc
    10681 ttttcatcaa tcccttttat tttaggggaa ttgaatagat agttttaaac tatacgaatt
    10741 attaatattt gagatttaat tgaaataagt tttaaaaatt ggaggagata gattaagcga
    10801 agtcatttaa aggtgaagtt aagtgtattc acaaaaaata gccacactca tatgacatcg
    10861 gatgagtgtg gcttaaggat ctatgggggg aggaaaccat agatgtttac tttgataggc
    10921 cagattaaat atcaaagtat gcgattattt atagcttgat gcaaaagtgg tatgcctatt
    10981 aaaagttact gcacatagct tttaatattc cgttcaaagg aaaggggcat acaattgaac
    11041 aatctgtaat agtactttta accagctatg ctaaaagtct agtagggaga acagttgtcc
    11101 aatcacataa gaacctctaa cttcgttagt acgattaaga aaagcttttt agttagtatg
    11161 taatacaatt tattgacgcg cgtgaatctc ttttataaga gtgtgtaggg aatggcgttg
    11221 tataaattgt attagaagaa cttctaacgc atctctgtgg ttaaaagaga tgaagggaac
    11281 gacagtttaa ttaaaactgc ataagaactt ctagcttttc tctctcgttc aaagagaagc
    11341 agctgttcgc agtttaatca aaaccacata aagcttttaa ctttactctt tgatttaaag
    11401 agtgataaat gtttacagtt taattaaaac tgcataagaa cttctagctt ttctctttcg
    11461 ttcaaagaga agcagctgtt cgcagtttaa tcaaaaccac ataaagcttt taactttact
    11521 ctttgattta aagagtgaca aatgtttaca gtttaattaa aactgcataa gaacttctag
    11581 cttttctctt tcgttcaaag agaagttcta ataccaccat atcgtgcgat cgggaacggt
    11641 atatatatta ataggagggt aatatatatt taacgcacga tatgggacta ttagccttcg
    11701 actttgttat gttgatgtgt ggcctaaaat attggagata ccaatatttt aggttgcatc
    11761 aacatcaatt catcttactt cattaaaaca cagcgtgtta tttcatgctt ccgtgtacag
    11821 tttcaatatt tgatttcatc attttgtagt aagagtcacc tttagtgcct tctttaccga
    11881 ttgaatctgt gtacacttca ccaaagatat ctttcttcgt ttcttcagat aaactttcca
    11941 ttgctttctt atcaacactt gtttctacta ataagtgttt taatttgtgc tttttaacaa
    12001 actcaatagc ttgtctcatt tgttcaggtg taccttgttt ttcagtgtta atttcccaaa
    12061 tataacctgg tgtaataccg tattgttttg agaagtactt gaaggcacct tcacttgtaa
    12121 tcatggcacg ttgttctttt ggaatgtcat taaatttgtc tttactgtca ttatttaatt
    12181 tttccaattg agcaatgtat ttgttacctt gcttttcata atctgcttta tgttttttgt
    12241 cgttatcgat aaatgtttgt tgaattgttt ttacgtattt aataccgtta tctaaactta
    12301 accatgcgtg tggatcttgt ttatctttgt tgccttcttc accgtttaaa tagataggtt
    12361 taacatcttt tgatactgcg ataacttttt tatcttttaa tgatttacca gcctgttcta
    12421 aggctttttc aaaccaaccg ttaccagtct ctaaatttaa tccgttgtat aaaataacgt
    12481 cagcgtcagt taacttttta atatctttag gtttaacttc atattcatga ggatcttgac
    12541 caacaggtac aatactatga atatcgacgt tgtctccacc aacattttta gccatatcat
    12601 ataaaattga attcgtcgtt actactttta atttgccatt tgacttatca ctgctttgtt
    12661 taccaccagt accacatgca gcaactagaa gtaataaggc taataataaa ggtactaatt
    12721 ttttcatgtt aaacttcctc gtttctttct attcgtaaat tttgtgaaaa ataatgtgat
    12781 gatataaatt acaaacgtac aaagtacgat tgtcgcacca ctaggaatgt tgtaaatata
    12841 gctgtaataa agtccgacaa ttgaacttat gacacttatt aaacttgcta taatcatcat
    12901 tgagtatagt tttttactaa ttaaaaatgc tgtagatgca ggtgtaatta ataatgcaac
    12961 tacaagaata atacctaccg tttgaatact tgctactgtt actaatgaga gtaacaacat
    13021 cacaaagtaa tgtaataacg tcgtatttag accactcatt ctactaaacg ttggatcgaa
    13081 tgtagaaatc attaatggac gatagaaaat aatgattaga ataaggacga ttgaaccaat
    13141 cacaatagtt gttaaaaatg cactatttgt gattgccagt aaattaccaa acagaatatg
    13201 gtacaaatct gtcgtagtgt ttattaagct aataataata atccccgaag ctaagaaagc
    13261 ggtaaaacta attccaatag cggcgtcagg tttcgtttta ctactagatg tgatataacc
    13321 gataaaaata cttgcgatca taccagttat aagtgcgcct acaaacattg gaataccaaa
    13381 taagaatgat agggcaacac caggtaatac tgcgtgactc attgcatctc ccattaatga
    13441 aagaccacgt aatacaatta aactaccaac tgtaccacaa actatcccta caataattga
    13501 agttatcaat gctcgattca agaattgata tgtaaataaa tgttcgacaa actctaacat
    13561 gttatattgc tcctttgact agggtcacta cagtcagtgc tactcataaa tgtttcgttt
    13621 aagcgagtga cactcatagc ctcttcacta tcaccaaagt atcgtaatgt ttgatttaat
    13681 agaataatgc gatcaaagta ttgctttgct tttgatagat catggtggat gataagaata
    13741 agttttcctt gttgttttaa gttctcgatt tttgtcatga ttaatttttc gctactaaaa
    13801 tcaattccga caaacggctc atctagaaaa taaacttcac tttcggacat caatgctctt
    13861 gctactagca cacgttgtaa ttgtccacca cttaattctg aaatttgtcg atgacgtaaa
    13921 gattctaatt ctaaatcgct taataactgt ttgagtttat cccttgctga tttattaggt
    13981 cgtctaaacc atccaatttc tttgtagcaa cctgataaaa tcacttgttc cacacttata
    14041 ggaaaatcta aatcaatatg tgctttttgt ggaatatatg taatatgttg cagttgttgt
    14101 tgtataggtt tgttatataa caatttagta ccggtagcat taaattcacc aattaaagac
    14161 ttgataaggg aagatttacc agcaccattc gggcccatga taccaattat ttcgccgcgt
    14221 actggtatcg ataaggaaat gtttttaagt acatgcttat tacctaaaaa cagatttaaa
    14281 tcttttgttt ctaacaaacg tttatacctc ctaattaaaa gtttaggcta acctaattaa
    14341 ttgtataata aactgagaat atttatcatg tcaagtaaat tcgtgatata atatagacaa
    14401 tgtatgtgag gtgaaagtat gttaactgaa gaaaaagagg actatttaaa ggcaatcctt
    14461 acgaataatg gcgataaaaa ctttgtgaca aataaaatct tatctcaatt tttaaatatt
    14521 aagcctccat ctgtaagtga aatggtagga cgtcttgaaa aagcaggcta tgttgaaaca
    14581 aaaccataca aaggtgttag attaacagag gatggtttaa cgcatacgct tgatatcatt
    14641 aagagacatc gactattaga attattttta atagaaatat tgaaatataa ttgggaagaa
    14701 gtacatcaag aagcagaaat tttagaacat cgaatttcag atttatttgt tgaaaggctg
    14761 gatagcctgt taaatttccc agaaacttgc ccgcacggcg gtgtgattcc tagaaataat
    14821 gaatataaag agaaatatat aacaacgatt ttgaattatg aacctggtga tatcgttaca
    14881 atcaaacgtg tgagagataa gaccgatttg ctaatatatt tgtctagtaa agatatttct
    14941 attggtaatg aagtggaaat tgtatcgaaa gatgaaatga ataaagtaat tatcattaaa
    15001 cgtaatgata atgtaattat tgtcagttac gaaaatgcaa tgaacatgtt tgctgaaaaa
    15061 taaaataaag aagccataaa gatatccatg attgaactga taaagacata tggataattg
    15121 ctttaggctt cttttttatt agttaattta tcaagtgagt atatttgagt aaaatattca
    15181 ctgcataaag attgaagata atccagattg tactataaat gaagataggt acatgactga
    15241 gttctttaag tgcactacca tcccactgtg gactcggacg ctggaaagtc aatttagcaa
    15301 tcgtccaact agattgtaga acttcgccta ataatacacc taaaatatat tgataactca
    15361 ttgtgacaag tagttgaatt tctactatat tttcatcttt taatataaaa tacaacatga
    15421 tagaaattaa agttataaca acaatgggtg agccttttct agatgttaaa attaaaaaat
    15481 aaataaatat caataaatag gtaaatataa agaaactagg tatctgataa tggctcgacg
    15541 ctaaacctat caataacata ataggtggca taaaataacc accaatcgtt gtaagccatt
    15601 ggcctgctag atgtctagat tgtgtaattg cgaatccttg ttgtaatgtc tgttgtcgct
    15661 ctcgtggact tgttacaatg actaaatctt ttgcacggcc accagcgagt ttattaaaca
    15721 gtacatgacc aaattcatgt gttaaaacag ggatatagtt taaaatgaca tctaaatagt
    15781 tcaaaacagg cttatgtcta tattgatgaa tagcaatata acaagctgca acaataacga
    15841 taatgtatat attaagttga attgtcgtat taaaaaagtt tgataaataa ttcattgtta
    15901 acctcatata agatattaat ttaaagtttg cttatcactt attataaatg atattggcat
    15961 caatagcgtt agactttaga cttaccttag ttaaactaat tttaattttt gaaaaggtga
    16021 atatgtgtta aaataaagca aaatcatttc gatataaata ggatgaatat aaatactgtt
    16081 aatattgatt acactaacat aataatgaaa taagatagga gattcctgtt atgactgttg
    16141 aagaaagatc caatacagcc aaagttgaca ttttaggggt cgattttgat aatacaacaa
    16201 tgttgcaaat ggttgaaaat attaaaacct tttttgcaaa tcaatcaacg aataatcttt
    16261 ttatagtaac agccaaccct gaaatagtga attacgcgac gacacatcaa gcgtatttag
    16321 agttaataaa tcaagcgagc tatattgttg ctgatgggac aggagtagtc aaagcttcgt
    16381 atcgtttaaa gcaacctcta gcgcatcgta tacctggtat tgagttgatg gatgaatgtt
    16441 tgaaaattgc tcatgtaaat catcaaaaag tatttttgct aggggcaact aatgaagttg
    16501 tagaagcggc acaatatgca ttgcaacaaa gatatccaaa catatcgttt gcacatcatc
    16561 acggttatat tgatttagaa gatgagacag tagtgaaacg aattaaactg tttaaacctg
    16621 attacatatt tgtaggtatg ggattcccta aacaagaaga atggattatg acacatgaaa
    16681 accaatttga atctacagtg atgatgggcg taggtggttc tcttgaagta tttgctgggg
    16741 ctaaaaagag agcgccttat atctttagaa aattaaacat tgaatggata tatagagcat
    16801 taatagattg gaaacgtatt ggtagattaa agagtattcc aatatttatg tataaaatag
    16861 ccaaagcaaa aagaaaaata aaaaaggcga aataatcatg atgacaaaaa taaaaccgag
    16921 gaaatcctta aatggagatt ctcggttttt tcggtttatt taataacgaa gcgggactca
    16981 tcgagtttgt ttctaaattc tttttgttcg gctttggatt tctttttaaa atcgttaagg
    17041 aaagcttcat atttaggtaa tacatcatca agttcaccgt aatcttttaa ctttccgcct
    17101 tcaatccaag caatcttagt acaaaattgt ctcacttgtc ctaagttatg actaacgaaa
    17161 aagatggttt tgttttgctc tttaaactcg taaattttat ctaaacattt ttgtgcaaaa
    17221 gtttggtcac ctacagataa agcttcgtca atgactaaga tatctggatt aactgtgata
    17281 ttaattgaaa aaccaagttt tgcacgcata ccacttgaat actttttaac tggttgataa
    17341 ataaactcac caagttcact aaattcaata atcttaggtg tcatcgcttt aatttctttt
    17401 cgcttaaagc ccatacataa cattttaaat tcgatatttt caatccctgt aagttgtcca
    17461 ctcaagccag cactaattgc gataacgctg acttcaccat tacgatccac tttgccaaca
    17521 gtaggcgaca aagaaccgcc aatgatattg ctcaacgttg atttgccgga accattgatg
    17581 ccaacaagcc ctatgacgtc accttcatat gcttttaaac taatgtcatc taaagcgaaa
    17641 aatgttttgt ttttatgttt gggaatgagc gcatctttca tacgttcttt atttgtacga
    17701 taaatacgat attcttttgt tacattttta atgtttaccg aaacgttcat ttgtagacct
    17761 tccttattca catttatcta gattataata tactactcaa cagttgttaa attttaaaac
    17821 ctgttgtaaa gtgtatagaa gattttgtta ttatcagagt gggtgttttg acacaaaatg
    17881 ttaatcatca atgataacaa tgatatttaa aaactaaact tatttcaact tacatgattg
    17941 tatactataa tgtatttgta ataaactaat attttaaaga actagacaat aattttgata
    18001 gcatccatgt atagtgatag tatttacaac aattattata atactattta gttaagtaga
    18061 gaaatagtta aacatttgaa agtgtggttt aatggaatgt cagcaatagg aacagttttt
    18121 aaagaacatg taaagaactt ttatttaatt caaagactgg ctcagtttca agttaaaatt
    18181 atcaatcata gtaactattt aggtgtggct tgggaattaa ttaaccctgt tatgcaaatt
    18241 atggtttact ggatggtttt tggattagga ataagaagta atgcaccaat tcatggtgta
    18301 ccttttgttt attggttatt ggttggtatc agtatgtggt tcttcatcaa ccaaggtatt
    18361 ttagaaggta ctaaagcaat tacacaaaag tttaatcaag tatcgaaaat gaacttcccg
    18421 ttatcgataa taccgacata tattgtgaca agtagatttt atggacattt aggcttactt
    18481 ttacttgtga taattgcatg tatgtttact ggtatttatc catcaataca tatcattcaa
    18541 ttattgatat atgtaccgtt ttgttttttc ttaactgcct cggtgacgtt attaacatca
    18601 acactcggtg tgttagttag agatacacaa atgttaatgc aagcaatatt aagaatatta
    18661 ttttactttt caccaatttt gtggctacca aagaaccatg gtatcagtgg tttaattcat
    18721 gaaatgatga aatataatcc agtttacttt attgctgaat cataccgtgc agcaatttta
    18781 tatcacgaat ggtatttcat ggatcattgg aaattaatgt tatacaattt cggtattgtt
    18841 gccattttct ttgcaattgg tgcgtactta cacatgaaat atagagatca atttgcagac
    18901 ttcttgtaat atatttatat gacgaaaccc cgctaaccat taataaatgg aagtggggtt
    18961 catttttgtt tataatttaa gtaaataaca tattaagttg gtgtattatg aacgttttaa
    19021 taaagaaatt ttatcatttg gtagttcgaa tactttctaa aatgattacg cctcaagtga
    19081 ttgataaacc gcatatcgta tttatgatga cttttccaga agatattaag cctatcatca
    19141 aagcattaaa taattcgtcg tatcagaaaa ctgttttaac aacaccaaaa caagcgcctt
    19201 atttatctga acttagcgac gatgttgatg tgatagaaat gactaatcga acattggtaa
    19261 aacaaattaa ggctttgaaa agcgcgcaga tgattattat cgataattat tacctattac
    19321 taggtggata taataagact tctaatcaac acattgttca aacgtggcat gcaagtggtg
    19381 cattaaaaaa ctttggctta acagatcatc aagtcgatgt gtctgacaag gcaatggttc
    19441 agcagtaccg taaagtttat caagcgacgg atttttactt agtgggttgt gaacaaatgt
    19501 cacaatgttt taaacagtct ttaggtgcaa cagaagagca aatgctgtat tttgggcttc
    19561 cgagaattaa taaatattac acagctgata gagcaacggt taaggcagag ttaaaggata
    19621 aatatggaat tacaaataag ttggtattat atgtaccaac atatagagaa gataaagcag
    19681 ataatagggc tattgataaa gcttattttg aaaaatgttt accaggatat acactgatta
    19741 ataaattaca tccatcaatt gaagattcag acattgatga cgtatcttca atcgacacgt
    19801 ctacattaat gctaatgtca gatataatta ttagcgacta tagttcgctg ccaatagaag
    19861 ctagcttgtt agatattcca actatatttt atgtgtatga tgaaggaaca tatgatcagg
    19921 tgagaggcct gaatcaattt tacaaagcaa taccggatag ctacaaagtg tatactgaag
    19981 aagatttaat aatgacgata caagaaaaag aacatctatt aagtccgtta tttaaagatt
    20041 ggcataagta taatactgat aaaagtttac atcagctcac agaatatata gataagatgg
    20101 tgacaaaatg aggtttacga taatcatacc tacatgtaat aatgaggcaa caattcgaca
    20161 attgttaata tctattgaga gtaaagaaca ctatagaatc ctttgtattg atggtggttc
    20221 tactgatcaa acaattccta tgattgaacg gttacaaaga gaactcaagc atatttcatt
    20281 aatacaatta caaaatgctt cgatagctac gtgtattaat aaaggtttga tggatatcaa
    20341 aatgacagat ccacatgata gtgacgcatt tatggtcata aaaccaacat caatcgtatt
    20401 gccaggtaaa ttagataggt taactgctgc tttcaaaaat aatgataata ttgatatggt
    20461 aatagggcag cgagcttaca attaccatgg tgaatggaaa ttgaaaagtg ctgatgagtt
    20521 tattaaagac aatcgaatcg ttacattaac ggaacaacca gatttgttat caatgatgtc
    20581 ttttgacgga aagttattca gtgctaaatt tgctgaatta cagtgtgacg aaactttagc
    20641 taacacatac aatcacgcaa tacttgtcaa ggcgatgcaa aaagctacgg atatacattt
    20701 agtttcacag atgattgtcg gagataacga tatagataca catgctacaa gtaacgatga
    20761 agattttaat agatatatca cagaaattat gaaaataaga caacgagtca tggaaatgtt
    20821 actattacct gaacaaaggc tattatatag tgatatggtt gatcgtattt tattcaataa
    20881 ttcattaaaa tattatatga acgaacaccc agcagtaacg cacacgacaa ttcaactcgt
    20941 aaaagactat attatgtcta tgcagcattc tgattatgta tcgcaaaaca tgtttgacat
    21001 tataaataca gttgaattta ttggtgagaa ttgggataga gaaatatacg aattgtggcg
    21061 acaaacatta attcaagtgg gcattaatag gccgacttat aaaaaattct tgatacaact
    21121 taaagggaga aagtttgcac atcgaacaaa atcaatgtta aaacgataac gtgtacattg
    21181 atgaccataa actgcaatcc tatgatgtga caatatgagg aggataactt aatgaaacgt
    21241 gtaataacat atggcacata tgacttactt cactatggtc atatcgaatt gcttcgtcgt
    21301 gcaagagaga tgggcgatta tttaatagta gcattatcaa cagatgaatt taatcaaatt
    21361 aaacataaaa aatcttatta tgattatgaa caacgaaaaa tgatgcttga atcaatacgc
    21421 tatgtcgatt tagtcattcc agaaaagggc tggggacaaa aagaagacga tgtcgaaaaa
    21481 tttgatgtag atgtttttgt tatgggacat gactgggaag gtgaattcga cttcttaaag
    21541 gataaatgtg aagtcattta tttaaaacgt acagaaggca tttcgacgac taaaatcaaa
    21601 caagaattat atggtaaaga tgctaaataa attatataga actatcgata ctaaacgata
    21661 aattaactta ggttattata aaataaatat aaaacggaca agtttcgcag ctttataatg
    21721 tgcaacttgt ccgtttttag tatgttttat tttctttttc taaataaacg attgattatc
    21781 atatgaacaa taagtgctaa tccagcgaca aggcatgtac caccaatgat agtgaataat
    21841 ggatgttctt cccacatact tttagcaaca gtatttgcct tttgaataat tggctgatga
    21901 acttctacag ttggaggtcc ataatcttta ttaataaatt ctcttggata gtccgcgtgt
    21961 actttaccat cttcgactac aagtttataa tcttttttac taaaatcact tggtaaaaca
    22021 tcgtaaagat cattttcaac ataatatttc ttaccattta tcctttgctc acctttagac
    22081 aatattttta catatttata ctgatcaaat gagcgttcca ttaatgcatt ccccatcata
    22141 ttacgttgct tctcgccacc aaggttttta tagtctcctg cacccatgat aacttgatta
    22201 attctaaatt tacctcgttt ggtagtaatc gtatggttgt aatttgctgt atcacttgat
    22261 ccagttttta aaccatctgt acccggcaaa ctcatttttg caccttccaa tgaaaagttg
    22321 aatgtgtaat acgtaactgc atgcgttgtt ggtgctaact gctttgtaaa gtctaatatt
    22381 ttaggtgtct ctttaatcac gtgtaaatct aaaatggcat agtctctagc agtcgttaca
    22441 gtacgttctt ggtctttata ctttgttggt gcaaatgtac gtaatcttga attttcagca
    22501 cccgttggat tgacgaaatg tgtatttttc attccgatag ctttagcttt gttattcatt
    22561 aaatcaacga aatcgctggt gttttttgaa accttcttag ctaaaattaa tgccgcggca
    22621 ttactagaat tagatactgt aatttgtaat aggtctgcga ttgtccatac ttgtccagga
    22681 tatagtttcg tattactcaa ctcaggtagt gtagacataa tatattcttt gttcgtcatt
    22741 gtgactgtgt catcaagtga aagctgcccc ttatttacag cttccaatgt taagtacatt
    22801 gtcattaatt tagtcataga cgctggattc cacttagtat cgatattgta ttgatacagt
    22861 aattgtccag tttgacttac attaacagca ctcgtcggtt cgtatgcagc cgacaaacct
    22921 gcataaccat attgatttgc tgcttgtaca ggggttacgt cactgttagt agcttgtgca
    22981 tatggtgtca taatacttaa tgttaaacat aaaatgatga taatagatat taaatttttc
    23041 ataaagcgtt aatcttccct tttccaattc ttaaatattc cctaaaagca atggttattc
    23101 ctacttacgg aaatcattgc taattcactt caccttaatt aaattgttga aaataaagtt
    23161 ttctgcagtt aatttgaaaa ataatgcaaa tatattacgt gtgtagctaa aggtgttata
    23221 atgtttgtac gaagagcaaa cttactcaaa agcgattaat tttcatgttt taatataaag
    23281 actttgagaa gttattacaa aaaatgcaat agaaatattc tatcatataa atgttatgag
    23341 cggtattttg g
//
LOCUS       DALPQQ010000028        22689 bp    DNA     linear   BCT 22-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus strain K18-6-464
            SAMD00233528-rid16434743.denovo.028, whole genome shotgun sequence.
ACCESSION   DALPQQ010000028 DALPQQ010000000
VERSION     DALPQQ010000028.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMD00233528
            Sequence Read Archive: DRR236061
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 22689)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 22689)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001543423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001543423.1
            Genome Coverage       :: 77x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/22/2022 17:09:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,811
            CDSs (total)                      :: 2,743
            Genes (coding)                    :: 2,689
            CDSs (with protein)               :: 2,689
            Genes (RNA)                       :: 68
            rRNAs                             :: 2, 4, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 4, 2 (16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 54
            CDSs (without protein)            :: 54
            Pseudo Genes (ambiguous residues) :: 0 of 54
            Pseudo Genes (frameshifted)       :: 27 of 54
            Pseudo Genes (incomplete)         :: 27 of 54
            Pseudo Genes (internal stop)      :: 10 of 54
            Pseudo Genes (multiple problems)  :: 10 of 54
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..22689
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMD00233528-rid16434743.denovo.028"
                     /strain="K18-6-464"
                     /db_xref="taxon:1280"
                     /geo_loc_name="Japan: Niigata"
     gene            complement(36..1049)
                     /locus_tag="O7798_000968"
     CDS             complement(36..1049)
                     /locus_tag="O7798_000968"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500237.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LLM class flavin-dependent oxidoreductase"
                     /protein_id="HDC2863236.1"
                     /translation="MAIKYSALNLVPIREGEDEQTAINDMVNLAQHLDELSYERYWIA
                     EHHNAPNLVSSATALLIQHTLEHTKHIRVGSGGIMLPNHAPLIVAEQFGTMATLFPNR
                     VDLGLGRAPGTDMMTASALRRDQHDGVYKFPEEVSLLQQYFGPAHQQAYVRAYPAVGK
                     NVPLYILGSSTDSAHLAARKGLPYVFAGHFAPQQMKEAIEIYKTLFEPSDVLDEPYVI
                     VCLNTIVAENDDEAQYLASSMAQVMVSITRGRMQPVQPPTHELQNILTPREYAMAMER
                     QKISLIGSENTVQQKIQDFMETYGEVNEIMAISYIYDKDMQLDSYRRFKNVINQINEK
                     NTL"
     gene            1361..2503
                     /locus_tag="O7798_000969"
     CDS             1361..2503
                     /locus_tag="O7798_000969"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500236.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine desulfurase"
                     /protein_id="HDC2863237.1"
                     /translation="MEIYADYAATTPVKPEVVDAMMTIYNSHYGNPSSIHAKGRDARK
                     YLDESRRQIAQLLGADTHEIIFTSGATESNNTAIKGIVKANEQLGNHIITSKIEHHSV
                     LHVFEQLEREGFDVTYLDVDDTGAIDLDQLEETITDKTILVSIMFVNNEVGTVQQIYD
                     IQDIIAETNAYFHVDAVQAIGHLDVKFDEFEIDAMSITAHKFGGPKGVGALLVKDHVT
                     LDYPQLGGEQELKRRAGTENLAQIVGMAKALQLAEKNRDDNNIHLMNLKEQFLVKLQE
                     RAIPFELNGSMTDATGHIVNLYFPFVEVETMLTLLDMAQIYVSSGSACTAGSTQPSHV
                     LDAMFEDEERSNHSIRFSFNELTTENEINAIVAEIHKIYFKFKEES"
     gene            2504..3622
                     /gene="mnmA"
                     /locus_tag="O7798_000970"
     CDS             2504..3622
                     /gene="mnmA"
                     /locus_tag="O7798_000970"
                     /EC_number="2.8.1.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001830892.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA 2-thiouridine(34) synthase MnmA"
                     /protein_id="HDC2863238.1"
                     /translation="MSNKDIRVVVGMSGGVDSSVTAHVLKEQGYDVIGIFMKNWDDTD
                     ENGVCTATEDYNDVIEVCNQIGIPYYAVNFEKEYWDKVFTYFLDEYKKGRTPNPDVMC
                     NKEIKFKAFLDHAMNLGADYVATGHYARIHRHEDGHVEMLRGVDNNKDQTYFLNQLSQ
                     QQLSKVMFPIGDIEKSEVRRIAEEQGLVTAKKKDSTGICFIGEKNFKTFLSQYLPAQP
                     GDMITLDGKKMGKHSGLMYYTIGQRHGLGIGGDGDPWFVVGKNLKDNVLYVEQGFHHD
                     ALYSDYLIASDYSFVNPEDNDLDQGFECTAKFRYRQKDTKVFVKRENDHALRVTFAEP
                     VRAITPGQAVVFYQGDVCLGGATIDDVFKNEGQLNYVV"
     gene            4084..4752
                     /locus_tag="O7798_000971"
     CDS             4084..4752
                     /locus_tag="O7798_000971"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500233.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HDC2863239.1"
                     /translation="MIDQQTIYQYIQNGKIEEALQALFGNIEENPTIIENYINAGIVL
                     ADANEIEKAERFFQKALTIDPKNGVVFFNLANVYYNQQRYQEAIKLYQQALQTEIEQV
                     DCNYMIGMAFNQLESFKLALPYLMTAAELDKDKDAEVQFQYGLVLCQLEMFNEAITQL
                     KHVLTIDKNHVDARYNLGLALFMKNEDIDEAITHFKEAVTIDPKHLLSQHALKTFTKM
                     KEEE"
     gene            4754..7231
                     /locus_tag="O7798_000972"
     CDS             4754..7231
                     /locus_tag="O7798_000972"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500232.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent RecD-like DNA helicase"
                     /protein_id="HDC2863240.1"
                     /translation="MSDPTLFDYSMIKGTVEAILFQNSDNFYTVLKVDTIETNEDFDT
                     MPTVVGFLPNIVEGDVYTFKGQVVDHPRYGKQLKAETFEKEMPQTKEAIISYLSSDLF
                     KGVGKKTAQNIVNTLGDNAINDILDDHSVLEKVSGLSKKKQKQIAEQISANQESEKIM
                     IRLHDLGFGPKLSMAIYQFYLGDTLTILDRNPYQLIYDIKGIGFNKADQLARNIGIAY
                     NDNERLKAALLYTLEEECIKQGHTYLPINVVIDLTVDVLNYQDEEVIEPEKLDEMLQY
                     LNEEKRLIIDNEQVAIPSLYYSEIKSVQNLFRIKTHTNKLTEIEQSDLQMHIGEIEDA
                     NQVNYAASQKEALQTAINSKVMLLTGGPGTGKTTVIKGIVELYAEIHGLSLDYDDYVN
                     DDYPVVLAAPTGRASKRLQESTGLEAMTIHRLIGWNQDTKPEDILENEINARLIIIDE
                     MSMVDTWLFHQFLSAVPLDAQLIFVGDEDQLPSVGPGQVFKDLIESKAIPRVNLTEVY
                     RQQDGSSIIELAHRMKLGQKIDITQRFHDRSFINCQANQIPTVVEKVVTSAVNKGYTM
                     ADIQVLAPMYKGNAGIKRLNQVLQDILNPKKKDTREIEFGDVVFRKGDKVLQLVNRPN
                     DNIFNGDIGVIVGIFWAKENALNKDVLVVDFEGNEITFTKQDMMELTHAYCTSIHKSQ
                     GSEFPIVIMPIVKQYFRMLQRPILYTGLTRAKTSLVLLGDPEAFDIGLKTNGQARLTQ
                     LCTLLKNYFNSEDEEMLENTATNDTGASQTTIDDQVEAPMSSNDSEEVMSDSTKTDTN
                     VLTEATMFKIDPMINMGEITPYDFIER"
     gene            7574..10204
                     /gene="alaS"
                     /locus_tag="O7798_000973"
     CDS             7574..10204
                     /gene="alaS"
                     /locus_tag="O7798_000973"
                     /EC_number="6.1.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500231.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alanine--tRNA ligase"
                     /protein_id="HDC2863241.1"
                     /translation="MKKLKASEIRQKYLDFFVEKGHMVEPSAPLVPIDDDTLLWINSG
                     VATLKKYFDGRETPKKPRIVNSQKAIRTNDIENVGFTARHHTFFEMLGNFSIGDYFKQ
                     EAIEFAWEFLTSDKWMGMEPDKLYVTIHPEDMEAYNIWHKDIGLEESRIIRIEGNFWD
                     IGEGPSGPNTEIFYDRGEAYGQDDPAEEMYPGGENERYLEVWNLVFSEFNHNKDHSYT
                     PLPNKNIDTGMGLERMASVSQNVRTNYETDLFMPIMNEIEKVSGKQYLVNNEQDVAFK
                     VIADHIRTIAFAISDGALPANEGRGYVLRRLLRRAVRFSQTLGINEPFMYKLVDIVAD
                     IMEPYYPNVKEKADFIKRVIKSEEERFHETLEDGLAILNELIKKAKATTNEINGKDAF
                     KLYDTYGFPIELTEEIAVQAGLKVDMTTFESEMQQQRDRARQARQNSQSMQVQSEVLK
                     NITSASTFVGYDTATAQTTLTHLIYNGEEVSQVEAGETVYFMLTETPFYAISGGQVAD
                     TGIVYNDNFEIAVSEVTKAPNGQNLHKGVVQFGQVNVGATVSAEVNQNDRRDIQKNHS
                     ATHLLHAALKSVLGDHVNQAGSLVEADRLRFDFSHFGPMTNDEIDQVERLVNEEIWKG
                     IDVNIQEMDIASAKEMGAMALFGEKYGDVVRVVNMAPFSIELCGGIHVRNTSEIGLFK
                     IVSESGTGAGVRRIEALTGKAAFLYLEDIQEKFNTMKSQLKVKSDDQVVDKLTQLQDE
                     EKALLKQLEQRDKEITSLKMGNIEDQVEEINGYKVLVTEVDVPNAKAIRSTMDDFKSK
                     LQDTIIILASNVDDKVSMVATVPKSLTNNVKAGDLIKQMAPIVGGKGGGRPDMAQGGG
                     TQPENISKSLSFIKDYIKNL"
     gene            10267..10527
                     /locus_tag="O7798_000974"
     CDS             10267..10527
                     /locus_tag="O7798_000974"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500230.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IreB family regulatory phosphoprotein"
                     /protein_id="HDC2863242.1"
                     /translation="MENFDKTMKFDYEELPTQDVRDVLNNVYRTLDERGYNAVNQIVG
                     YLLSGDPAYIPRQNEARNQIRHIDRDVIMEELVSYYLKEQNK"
     gene            10531..10959
                     /gene="ruvX"
                     /locus_tag="O7798_000975"
     CDS             10531..10959
                     /gene="ruvX"
                     /locus_tag="O7798_000975"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Holliday junction resolvase RuvX"
                     /protein_id="HDC2863243.1"
                     /translation="MLQHKILGLDVGSRTVGIAISDIMGWTAQGLDTLRINEENKELG
                     IDQLVDIIKKHNVGTVVIGLPKNMNNSIGFRGEASLTYKEKLLEAYPSIEIVMWDERL
                     STMAAERSLLEADVSRQKRKQVIDKMAAVFILQGYLDSLH"
     gene            10974..11282
                     /locus_tag="O7798_000976"
     CDS             10974..11282
                     /locus_tag="O7798_000976"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500228.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1292 domain-containing protein"
                     /protein_id="HDC2863244.1"
                     /translation="MTEHNHDSQLEINNEEELLTLFDEEGNEVLYRKVLEFYHPEFKK
                     EYVILAEEGAQSDEDDMIELVPMINEPDESGDGGKLVPIETDEEWDMIEEVVNTEMEE
                     "
     gene            11567..12205
                     /locus_tag="O7798_000977"
     CDS             11567..12205
                     /locus_tag="O7798_000977"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500227.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="O-methyltransferase"
                     /protein_id="HDC2863245.1"
                     /translation="MDDLNKKYLIDLHQHQNSSIEVLREFAEVNEVPIVDRLTLDLIK
                     QLIRMNNVKNILEIGTAIGYSSMQFASISDDIHVTTIERNETMIQYAKQNLATYHFEN
                     QVRIIEGNALEQFENVNDKVYDMIFIDAAKAQSKKFFEIYTPLLKHQGLVITDNVLYH
                     GFVSDIGIVRSRNVRQMVKKVQDYNEWLIKQPGYTTNFLNIDDGLAISIKGE"
     gene            12208..13131
                     /locus_tag="O7798_000978"
     CDS             12208..13131
                     /locus_tag="O7798_000978"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500226.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="U32 family peptidase"
                     /protein_id="HDC2863246.1"
                     /translation="MTELLVTPKSLSHMETLIDLGADAFVIGEQKFGLRLPGEFNRQQ
                     MTEAVALAHKNDKKVYAAVNGLFHNYHLDAVEDYINFLHEIRVDRIIFGDPAVVMYVK
                     AQENPIPLHWNAETLVTNHFQCNYWGKRGASRAVLARELNLDEIINIKENSNVEIEVQ
                     VQGMTCMFQSKRMLLGNYYTFQDRQMKIERRNDEQSLLLYDEERQNNYPVYEDYNGTH
                     IMSPNDICLIEELAPFFEAGIDSFKIDGILQTEEYINVVTEQYRQAIDLYNEDPEIYE
                     DEKFMLMDPIEEIQPDHRPFDEGFLYKQTVY"
     gene            13143..14411
                     /locus_tag="O7798_000979"
     CDS             13143..14411
                     /locus_tag="O7798_000979"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006190454.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="U32 family peptidase"
                     /protein_id="HDC2863247.1"
                     /translation="MKTIEEIKSTPKTVMKKPELLAPAGNLEKLKIAVHYGADAVFLG
                     GQEYGLRSNADNFTMEEIAEGVEFANRYGAKIYVTTNIIAHDENIEGLESYLRNLEKT
                     GATGIIVADPLIIETCKEVAPKLEIHLSTQQSLSNYKAVEYWKEEGLDRVVLARETGA
                     MEMREMKEKVDIEIEAFIHGAMCIAYSGRCTLSNHMTARDSNRGGCCQSCRWDYELLE
                     VDDNGELDVFYNQGEVTPFAMSPKDLKLIESIPQMMDIGVDSLKIEGRMKSIHYIATV
                     VSVYRKVIDAYAADPDNFKINPEWLIELDKCANRDTAPAFFEGTPGYEEQMFGQQQSK
                     KSPFDFCGLVLDYNEDTKIATIQQRNNFKPGQEIEFFGPEIETFTQVVEAIYDEEGNS
                     LDAARHPLQIVQIKVDRPIYPNNMMRKEIG"
     gene            14411..15034
                     /gene="udk"
                     /locus_tag="O7798_000980"
     CDS             14411..15034
                     /gene="udk"
                     /locus_tag="O7798_000980"
                     /EC_number="2.7.1.48"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500224.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="uridine kinase"
                     /protein_id="HDC2863248.1"
                     /translation="MKATTIIGIAGGSGSGKTTVTNEIMKNLEGHSVALLAQDYYYKD
                     QKHLTFDERLETNYDHPFAFDNDLLIENLKDLKNGKAVEVPTYDYASHTRSDITIDFK
                     PKDVIIVEGIFALENKVLRDMMDVKIYVDTDADLRILRRLTRDTKERGRSMDSVINQY
                     LSVVRPMHDQFIEPTKKYADIIIPEGGSNKVAIDIMTTKIQSLVSKQ"
     gene            15062..15538
                     /gene="greA"
                     /locus_tag="O7798_000981"
     CDS             15062..15538
                     /gene="greA"
                     /locus_tag="O7798_000981"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500223.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcription elongation factor GreA"
                     /protein_id="HDC2863249.1"
                     /translation="MENQKQYPMTQEGFEKLERELEELKTVKRPEVVEKIKVARSFGD
                     LSENSEYDAAKDEQGFIEQDIQRIEHMLRNALIIEDTGDNNVVKIGKTVTFVELPGDE
                     EESYQIVGSAESDAFNGKISNESPMAKALIGKGLDDEVRVPLPNGGEMNVKIVNIQ"
     gene            15864..16591
                     /gene="pxpB"
                     /locus_tag="O7798_000982"
                     /pseudo
     CDS             15864..16591
                     /gene="pxpB"
                     /locus_tag="O7798_000982"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001617363.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="5-oxoprolinase subunit PxpB"
     gene            16581..17591
                     /locus_tag="O7798_000983"
     CDS             16581..17591
                     /locus_tag="O7798_000983"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000023326.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="biotin-dependent carboxyltransferase family
                     protein"
                     /protein_id="HDC2863250.1"
                     /translation="MSIKILQPGLFSTVQDLGRIGYEHIGFSGAGAMDQFSFKVAQSL
                     INNDGPAIEYTLIGPTIQFNTQNTFVITGGSINASLNNKTISMNSVILAEKGDILKIG
                     AITKGARGYLTFGHSINVPSIAESYATHTRSSIGGFKGRKLLADDVITVKINNDFKEN
                     IGKTIHLQDDLLPENNIIHILQGPQFEAFSEEARAKIVNHPYLITEQSDRMGYRLEGD
                     SVAPINQADIISEPVALGSVQVPNDGQPIILLNDKQTIGGYTKIATVCKFDLPKLAQM
                     KPQDTIQFKWISFQEAVDKNREQMSLFNEILKSHQKTPIFDTSSLRHTSKKLATILKG
                     DL"
     gene            17593..18042
                     /locus_tag="O7798_000984"
     CDS             17593..18042
                     /locus_tag="O7798_000984"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500220.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA carboxylase biotin carboxyl carrier
                     protein subunit"
                     /protein_id="HDC2863251.1"
                     /translation="MNIEKIEQIIKLVKENDVKKFKYKNFEDEIEIDFTDSNHLAAHS
                     NQSNQSMNNNDLTASKANDNSDVSTNDYHDIKSPMIGTFFLQDSKELTEPIVNVGDKV
                     NKGDIIGYVEAMKVLNEVTTDVAGEITEIVADHGTNVEYDQVLVRIK"
     gene            18056..19417
                     /locus_tag="O7798_000985"
     CDS             18056..19417
                     /locus_tag="O7798_000985"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500219.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA carboxylase biotin carboxylase
                     subunit"
                     /protein_id="HDC2863252.1"
                     /translation="MLRCLIANRGEIAVRIIRACREYGIETVAVYAKGDEQSLHVHLA
                     DQAICIGEANALDSYLNIDRIISAAQITGANAIHPGYGFLSESTKFAQTVEEQGIAFI
                     GPTKKTMEMMGDKITARQTVHHAGVPVIPGSNGAVNHVSEIENLAKDIGYPVVIKAAS
                     GGGGKGIRIVKKAEDLEKAFKEAKSEGKKYFDDDRVYVEAFIPVAKHVEVQVMGDGQD
                     NYVHLGERDCSVQRKNQKLIEESPCAALTEERRQQICNDAVKVARAANYRSAGTIEFL
                     VTDTAHYFIEMNARIQVEHTVTEMRAERDLVAAQLYLLEHNHLPFSQSDIQFNGHVIE
                     ARINAENPEKKFQPTPGKVTALHLPQGFNVRVDSLLYHGYQVSPYYDSLVAKVIVKSH
                     DRASAIDKLKVTLDEMVIDGFSTTADFLYAVLNYPLYRDGDAKDVDIKFLEKHQIVKG
                     VEL"
     gene            19417..20169
                     /gene="pxpA"
                     /locus_tag="O7798_000986"
     CDS             19417..20169
                     /gene="pxpA"
                     /locus_tag="O7798_000986"
                     /EC_number="3.5.2.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500218.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5-oxoprolinase subunit PxpA"
                     /protein_id="HDC2863253.1"
                     /translation="MRVDLNCDLGEAFGNYYFGGDHQIIPLITSANVACGFHAGDENV
                     MNETVKLAKAHNVAVGAHPGLPDLKGFGRRNIDISNDEIYNLMIYQLGALQGFCRIHQ
                     VKINHVKPHGALYQMGAKDREIANVIAQAVYDFDPSLVLVGLANSYLISEAKNVGLIT
                     ASEVFADRRYEDDGQLVSRKESDAVITDTDEALKQVLKMVKENKVISKNNKEVTLQAD
                     TICVHGDGEHALLFVSKIREILMKEGIDIQSL"
     gene            20182..21411
                     /locus_tag="O7798_000987"
     CDS             20182..21411
                     /locus_tag="O7798_000987"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500217.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="divalent metal cation transporter"
                     /protein_id="HDC2863254.1"
                     /translation="MGRNLKLKKESDFEFTKNHKRLLLGSVFLMATSAIGPAFLTQTA
                     VFTSQFFASFAFAILLSIIIDIGAQINIWRILVVTGLRGQEISKKVVPGLGTVISILI
                     AFGGLAFNIGNIAGAGLGLNAIFGLDVKWGAAITAIFAILIFVSKSGQKIMDVVSMIL
                     GIVMILVVAYVMFVSNPPYGDAFVHTFAPEHPMKLVLPIITLVGGTVGGYITFAGAHR
                     ILDSGIKGKQYLPFVNQSAIAGILTTGIMRTLLFLAVLGVVVTGVTLSSENPPASVFE
                     HAIGPIGKNIFGIVLFAAAMSSVIGSAYTSATFLKTLHKSLNERSNLIVIVFIVISTM
                     IFLFIGKPISLLIIAGAINGWILPITLGAILIASKKKSIVGDYKHPNWMFIFGIVAVL
                     VTILTGIFSFKEVLQLF"
     gene            21700..>22689
                     /locus_tag="O7798_000988"
     CDS             21700..>22689
                     /locus_tag="O7798_000988"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500216.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Fic family protein"
                     /protein_id="HDC2863255.1"
                     /translation="MGYRTLKSIFHEHNESKMKEEYIKRFNSLASFNTNINIIPMENG
                     KKVNDLEYPLFFMVTKNLSKKQELISINSRKIDRALNSLPYAAREQYFNDLLIDELQS
                     TNEIENVFSTKQEIAHALNNQASEFLKFRGLVDQYKEIELNKKIKVDNVRDIRAIYDK
                     LVSNEINEQDKLDGELFRKNFVGVHDGSTNKYIHVGLQPETKIVEFIGEMLTFLKYFD
                     APQPFKIMASHYLFEYIHPFYDGNGRVGRFIIAKLLSDYYDNYTALTFSYVINRNKSK
                     YYKAFMTASNHLNCGDLTEFIDTMLELLIAGQERILDELIPKMDATEKLTLYLT"
BASE COUNT         8203 a         3116 c         4406 g         6964 t
ORIGIN      
        1 atggatacat actttcactt agtttattta tcacattata aagtgttttt ttcatttatc
       61 tgatttataa cattcttgaa ccgacgataa gagtctaatt gcatatcttt atcataaata
      121 taacttattg ccataatttc gttgacttca ccataagttt ccataaaatc ttgaattttt
      181 tgttgaacag tattttctga acctattaat gatattttct gtctttccat agccatcgcg
      241 tattctctcg gcgttaatat attttgtagt tcatgtgttg gcggttgaac gggctgcatt
      301 ctgccacgag tgatactaac cattacttgt gccatagatg aagctaaata ttgtgcttcg
      361 tcatcatttt cagcaacgat tgtatttaaa catacaataa cataaggttc gtctaataca
      421 tcagaaggtt caaataacgt tttgtaaatt tcgatagctt ctttcatttg ttgaggtgca
      481 aaatgtccag cgaacacata tggaagccct ttgcgagcag ctaaatgtgc agaatctgtt
      541 gaagaaccaa gaatgtataa aggcacattt ttacctactg ctggataagc acgaacatat
      601 gcttgttggt gagcagggcc gaaatattgt tgtaataatg aaacctcttc tggaaattta
      661 taaacaccat catgttgatc tcgtcttaat gcacttgcgg tcatcatatc tgttccaggt
      721 gcacgtccta atcctaaatc gacacgattt ggaaataatg ttgccatcgt gccaaattgt
      781 tccgcaacga ttaatggagc atgattaggt aacatgatgc ctccagaacc tacacgtatg
      841 tgtttcgtat gttctaacgt atgttgaatt aataaagcag ttgctgaact tactaggttg
      901 ggagcgttat ggtgttcagc aatccaatat ctttcatatg ataattcgtc taaatgttgt
      961 gcgagattaa ccatatcatt aattgctgtt tgttcatctt caccttctcg aatagggaca
     1021 aggtttaatg ctgaatattt aatcgccatt tttatatcgt ccttcctttt ttatgatata
     1081 agaagtatac caatcgaata accagataaa tattaaattg ctcataacca aaataatagt
     1141 acgttacatt ttacaaataa aaaaatatct gcaaatacta aaatttataa aaaagacaag
     1201 aataaagcga taaacttaaa aaagcctatc gaaaagcatg tgtagaaaat ggtaaaatat
     1261 aattaaaaac attataaata aagttaaaca gaaaagtaga aaaatagtat gtaaggtgct
     1321 attattggaa cattgataaa attgtgagga gtgtccaaac atggaaattt atgcagatta
     1381 tgctgcgacc acaccagtaa aacctgaagt agtagatgcg atgatgacga tttacaattc
     1441 gcattatggt aatccatcat caatacatgc taagggaaga gatgcgcgta aatatttaga
     1501 tgagtcaaga cgtcaaattg cacaattact tggtgcagat acacatgaaa ttatatttac
     1561 gagtggcgca acagaatcga ataatacggc aattaaaggc atagtaaaag caaatgaaca
     1621 attgggtaat cacattatca catcgaagat tgaacatcat tctgtgttac atgtttttga
     1681 acaattagag cgagaaggtt ttgatgtaac atatctagat gttgatgata caggtgctat
     1741 tgatttagat caacttgaag aaacaattac agataagacg attttagtat ctattatgtt
     1801 tgtaaataat gaagttggca cagtgcaaca aatttatgat attcaagata ttattgctga
     1861 gacaaatgca tatttccatg ttgatgcggt tcaagcaatt ggacatcttg atgttaagtt
     1921 tgacgaattt gagatcgacg caatgagtat tactgctcat aagtttggcg gaccaaaagg
     1981 tgtcggtgca ttactagtta aagaccatgt tacactagat tatcctcaac ttggcggtga
     2041 acaagaattg aaacgccgtg caggcactga aaatcttgcg caaattgttg ggatggctaa
     2101 agcattacaa ttagcagaaa agaatcgaga cgataacaat attcatttaa tgaatttaaa
     2161 agaacaattt ttagttaaat tacaagaaag agcgattcca tttgaattaa atggttcaat
     2221 gacggatgct acaggccata ttgtaaatct atattttccg tttgttgaag ttgaaacgat
     2281 gttaacattg ttggatatgg cacaaatcta tgtgtcgtct ggatctgcat gtacagcagg
     2341 ctctacacaa ccgtcgcatg ttttagatgc aatgttcgaa gatgaggagc gatcaaatca
     2401 ttcgattcga tttagtttta acgaattgac tactgaaaat gaaattaatg caattgtagc
     2461 tgaaattcat aaaatatatt ttaaatttaa ggaggagtca taattgtcaa ataaagatat
     2521 acgtgttgtc gttggtatgt caggcggtgt agatagttct gtaacagccc acgtcttaaa
     2581 agaacaaggt tatgatgtca ttggcatatt tatgaaaaac tgggatgaca ctgacgaaaa
     2641 tggcgtatgt actgcaactg aagattacaa cgatgttatt gaagtgtgta atcaaattgg
     2701 cattccgtat tacgctgtta attttgaaaa agaatattgg gataaagtct ttacgtattt
     2761 cttagatgaa tacaaaaaag gtcgtactcc aaatccagac gttatgtgta ataaagaaat
     2821 taagtttaaa gcctttttag atcatgcgat gaatttaggt gcagattatg tagcaacagg
     2881 acattacgca cgcatacatc gtcatgaaga tggtcatgtt gaaatgttac gtggtgtaga
     2941 taataataaa gatcaaacat acttcttgaa tcaattatct caacaacaac tttcaaaagt
     3001 gatgttccca attggcgaca tcgaaaagag tgaagtgcgt cgaattgctg aagaacaagg
     3061 acttgttact gctaagaaaa aagattctac aggcatttgt tttatcggcg aaaaaaactt
     3121 taaaacattt ttatcacaat atttacctgc acaaccgggt gatatgataa cacttgatgg
     3181 taagaaaatg ggtaaacata gcggtttgat gtattacaca ataggacaaa gacatggatt
     3241 aggtataggt ggagatggcg atccttggtt tgttgtcggt aaaaacctaa aagataatgt
     3301 tttatatgta gaacaaggat tccatcacga tgcattatac agtgattact taattgcttc
     3361 agactattca tttgtaaatc cagaagataa tgacttagat caaggttttg aatgtacagc
     3421 taaatttaga tatcgccaaa aagatacgaa agtttttgtg aaacgtgaaa acgaccatgc
     3481 actacgtgtt acttttgctg agccagtaag agcaatcaca cctggacaag cagttgtttt
     3541 ttatcaaggt gatgtgtgtc ttggtggtgc aacaattgac gatgtgttca aaaatgaagg
     3601 tcaattaaat tatgttgtat aaacaatggc aacaataaat tacttatttg aagtttcaac
     3661 gttgaaaatg acgaaagaca gtttttgatg agaataattc atgaggatag agtctgggac
     3721 atcacaatgt cctaggctct acaatgttat attggcggga ccacaacata gagaatttcg
     3781 taaagaaatt ctacaggcaa tgccagttgg ggataacgaa tttaattttg ttaaaatatc
     3841 atttctgtcc cactccctat gcatgaatct aattatgtat tcttattttt aagtacataa
     3901 tagtggtggc taatgtggaa gaaccattac ataataaacc gttaatggtt cttaagcatt
     3961 tctattccat tcccgctttt tcatgaatga agatgatatt agattatatt ttattcgttg
     4021 ttaagtgatt cgagacatac aatttatcaa gatgttataa ttgatgagaa atgaggttcg
     4081 taaatgatag atcaacaaac aatttatcaa tacatacaaa atggaaaaat agaagaagcg
     4141 ttacaagcat tgttcggaaa tatcgaagaa aatcctacaa ttattgaaaa ttatattaat
     4201 gctggtatcg tacttgctga tgcgaatgag attgaaaagg cagagcgttt tttccaaaaa
     4261 gctttaacaa tagatccgaa gaatggcgtc gtatttttta atctagcaaa tgtatattat
     4321 aatcagcaac gttatcaaga agctattaaa ttatatcaac aagcattaca aacagagatt
     4381 gaacaagttg attgtaatta tatgatcggt atggcgttta atcagttaga atcatttaag
     4441 ctggcattgc cgtatttaat gactgctgcg gaactagata aagacaaaga tgcagaagtt
     4501 caatttcaat atggtcttgt attatgtcaa ttagaaatgt ttaatgaagc cataactcaa
     4561 cttaaacatg tattaacgat tgataaaaat catgttgatg caagatacaa tttgggctta
     4621 gcgttattta tgaaaaatga agatattgat gaagcaataa ctcattttaa agaagctgtg
     4681 actatcgacc ctaaacactt attaagtcag catgcgctga aaacattcac taaaatgaaa
     4741 gaggaggagt aacatgtcag accctacact atttgattat tcaatgatca aaggtactgt
     4801 tgaagcgata ttgtttcaaa acagtgataa tttttataca gtgcttaaag tagatactat
     4861 tgaaacaaat gaagactttg atacaatgcc aactgttgta gggtttcttc cgaatattgt
     4921 tgaaggcgat gtctacacat ttaaagggca agttgttgat catccacgtt atggtaaaca
     4981 attaaaagca gagacttttg aaaaagaaat gccacaaacg aaagaagcaa ttataagtta
     5041 tttatctagt gatttgttta aaggtgtagg taaaaagaca gctcaaaata ttgttaatac
     5101 attaggtgac aatgcgataa atgatatatt agatgaccat tcagtgctag aaaaagtttc
     5161 gggattatct aaaaagaaac agaaacaaat tgcagaacaa atttcagcaa atcaagaatc
     5221 tgaaaaaata atgattcgtt tacatgattt agggtttggt cctaaacttt caatggcaat
     5281 ttatcagttt tatctcggcg atacactgac tattttagat cgaaatccat atcaattgat
     5341 ttatgatatt aaaggtattg gttttaataa agcagatcaa cttgctagaa atattggtat
     5401 cgcttataac gataatgaac gattaaaagc tgcgttgctc tatacgttag aagaagaatg
     5461 tattaaacag ggacatacat atttgcctat caatgttgtt atagatttaa cggttgatgt
     5521 attaaattat caagatgaag aggtcatcga acctgaaaaa ttagacgaaa tgttgcaata
     5581 cttaaatgag gaaaaacgac taattattga caatgaacaa gttgcaattc caagtttgta
     5641 ttattctgaa atcaaaagtg ttcaaaactt attcagaata aagacgcata caaataaact
     5701 tacagaaatt gaacagtcag atttacaaat gcatattggt gaaatagaag atgcgaatca
     5761 agtgaactat gcagcttcac aaaaagaagc tttgcaaacg gctatcaatt ctaaggtgat
     5821 gctattaacc ggtggaccgg gaacaggaaa aacgacagta attaaaggta ttgttgaatt
     5881 atatgctgag attcatggct tatcattaga ttatgatgat tatgtcaatg atgattatcc
     5941 agttgtatta gcagcgccaa caggaagagc gtctaagaga ctacaagagt caactggatt
     6001 agaagcaatg acgattcatc gtttaatagg ttggaatcaa gacacaaagc cagaggatat
     6061 attagaaaat gaaataaacg cacgactcat aatcattgat gagatgtcta tggtagatac
     6121 ttggttgttc caccaatttt taagtgcagt tcctttagat gcacaattga tatttgtagg
     6181 tgatgaggac caattgcctt ctgtaggtcc tggtcaagta tttaaagatt taattgaatc
     6241 gaaagctata ccacgagtaa atctgactga agtatatcgt caacaagatg gttcgagcat
     6301 tatagaatta gcacatcgaa tgaagttggg tcagaaaatt gatattacac agcgttttca
     6361 tgatagaagt tttattaact gtcaggcaaa ccaaatacca acagttgttg agaaggtagt
     6421 tactagtgct gttaataaag ggtatactat ggctgatatt caagtgcttg caccaatgta
     6481 taaaggaaat gccggtatta aacgtttaaa tcaagtttta caagatattt taaaccctaa
     6541 aaagaaagac acacgagaaa ttgagtttgg tgatgtagtc tttagaaaag gtgacaaagt
     6601 attacaactt gttaataggc caaatgataa catattcaat ggtgacatag gagttattgt
     6661 tggtattttt tgggcgaaag aaaatgccct taataaagat gtacttgttg tggattttga
     6721 aggtaatgaa attacattta cgaaacaaga tatgatggaa ttaacacatg cttattgtac
     6781 atcaatccat aaatcgcaag gttcagaatt tcctattgtt atcatgccta ttgttaaaca
     6841 gtattttaga atgttacaaa gaccgatatt atatactggt ttaactagag cgaaaacgag
     6901 tttagtttta cttggtgatc cggaagcatt tgatattgga ttgaaaacaa atggtcaagc
     6961 gcgtttaaca caattatgta cattgttgaa aaattatttt aattcagaag atgaagaaat
     7021 gctggaaaac acagcaacta atgatacagg agcttcacaa acgacaatag atgatcaagt
     7081 agaagcgcca atgtcatcga atgatagtga agaagttatg tctgattcaa caaaaacaga
     7141 tacaaatgta ttaacggaag ctacaatgtt taaaattgac ccaatgatta atatgggaga
     7201 aatcacgccg tatgacttta tagaacgttg acaacaagcg taaatgtaac taaaatagaa
     7261 ttaaattcgt ataaagatga gtagttaatg atttgtttat cagagatgta ctggttggtg
     7321 aaaagtacaa caaacattag tgaacgctac tttatgcaca actgtatagt cgaattaaag
     7381 tgataaatgt gttgaattgc atttataact agggtggtac cgcgataacg ttcgtccctt
     7441 ttgaggatgg gcgtttttta ttttttaata ataaaaaatg atattgattt atactagttt
     7501 tgcaaatcga ctatctgtgt catcaatttt tatggaatgg taatttaaaa acagtaaata
     7561 ggatgtgtaa atgatgaaaa agttaaaagc gagtgaaatt agacaaaaat atctagattt
     7621 ctttgttgaa aaaggacata tggttgaacc ttctgcacca ttagtgccaa ttgatgatga
     7681 tacattatta tggattaatt caggtgtagc aacattaaag aaatattttg atggacgtga
     7741 aacacctaaa aagccaagaa ttgtaaactc tcaaaaagct attcgtacaa atgatattga
     7801 aaatgttggt ttcacagcgc gtcaccatac attctttgaa atgttaggta acttctcaat
     7861 tggtgattat tttaaacaag aagcgattga atttgcttgg gaatttttaa cgagtgataa
     7921 atggatgggt atggagccag ataaattgta cgttacgatt catccggaag atatggaagc
     7981 atacaacatt tggcataaag atattgggct tgaagaaagt cgtattattc gcattgaagg
     8041 taacttctgg gatattggtg aagggccttc aggaccgaac actgagattt tctatgatcg
     8101 cggagaagca tatggacaag acgatccggc agaagaaatg tatccaggtg gagaaaatga
     8161 acgctatctt gaagtatgga acttagtatt tagtgaattc aatcataata aagatcatag
     8221 ttacacacca ttacctaata aaaatattga tactggcatg gggcttgagc gtatggcctc
     8281 agtttctcaa aatgtacgta ctaactatga aacagattta tttatgccta taatgaatga
     8341 aatcgaaaaa gtatcaggta aacaatattt agtaaacaac gaacaagatg tggcatttaa
     8401 agtaattgct gaccacattc gtacgattgc atttgcaatt tctgatggtg cattacctgc
     8461 caatgaaggt agagggtatg tattacgtcg attgttacgt cgtgccgttc gttttagtca
     8521 aacgttagga atcaatgagc catttatgta caaacttgtt gatattgttg cagacattat
     8581 ggaaccatat tatccaaatg ttaaggaaaa agcagatttc attaagcgtg ttataaagtc
     8641 tgaagaagaa cgattccatg aaacattaga agatggttta gcgattttaa atgaattaat
     8701 taaaaaagct aaagcgacaa caaatgaaat taatgggaaa gatgcattta aattgtatga
     8761 tacgtatggg ttcccaattg aattaactga agaaatagca gtgcaagcag gattgaaagt
     8821 tgatatgaca acattcgagt cagaaatgca acaacaacgt gatcgtgcac gtcaagcacg
     8881 tcaaaattct caatcaatgc aagttcaaag tgaagtattg aaaaatatta catctgcaag
     8941 tacttttgtt ggttatgata ctgcgacagc tcaaacaaca ctaacacact tgatatacaa
     9001 tggtgaagaa gtttcacaag ttgaagcggg tgaaacagta tacttcatgt taacggaaac
     9061 accattttat gcaatcagtg gtggacaagt tgcggataca ggtattgttt ataatgacaa
     9121 ttttgaaatt gctgttagtg aagtaaccaa agcaccaaat ggtcaaaact tgcataaagg
     9181 agtagtacaa tttggccaag taaatgttgg cgctacagtg tctgctgaag tgaaccaaaa
     9241 tgatcgacgt gacattcaaa agaaccatag tgcaacacat ttattacatg cagcgttgaa
     9301 atcagtactg ggtgatcatg ttaaccaagc tggttcacta gtagaagcag atcgtttacg
     9361 ttttgatttc tctcattttg gtccaatgac taatgatgaa attgatcaag ttgaacgctt
     9421 agtaaatgaa gaaatttgga aaggtattga cgttaacatt caagaaatgg atattgcttc
     9481 agctaaagaa atgggcgcaa tggcattatt cggtgaaaaa tatggtgatg ttgtgcgtgt
     9541 agtaaatatg gcaccatttt caattgaatt atgtggtggt attcatgtcc gcaatacttc
     9601 tgaaattggc ttattcaaaa tagtaagtga gtcaggtaca ggagctggtg tgcgtcgtat
     9661 tgaagcatta acaggtaaag cagctttctt atatttagaa gatattcaag agaaatttaa
     9721 tacgatgaaa tcacagctga aagtgaaatc tgatgatcaa gtagtcgata agttaacaca
     9781 attacaagat gaagaaaaag cattattaaa acaattagag caacgtgaca aagaaatcac
     9841 atcacttaaa atgggtaata ttgaagatca agttgaagaa atcaatggct ataaagtatt
     9901 ggttactgaa gtggatgtac caaatgcgaa agcaattcgc tcgacaatgg acgattttaa
     9961 atctaaacta caagatacaa ttatcattct tgcaagtaat gttgatgata aagtatcgat
    10021 ggttgcaact gtccctaaat ctttaacaaa taacgttaaa gccggtgatc ttatcaaaca
    10081 aatggcacca atcgttggtg gtaaaggtgg cggtcgtcca gatatggctc aaggtggcgg
    10141 tacacaacct gaaaatatct caaaatcatt aagctttatt aaagattaca ttaaaaatct
    10201 ataatttaaa gccataatat tgtatgatga tagtgagtta tatttgtaat taaaggagtg
    10261 tcgcaaatgg aaaactttga taaaacaatg aaattcgact atgaagaact tccaacgcaa
    10321 gatgtaagag atgttttaaa taatgtttat cgaacattag atgaacgagg atataatgcc
    10381 gtaaaccaaa ttgtaggtta tttattatca ggtgaccctg cgtatattcc acgccaaaat
    10441 gaagcaagaa atcaaattcg tcatattgat agagatgtta ttatggaaga gcttgtttct
    10501 tactatttaa aagagcaaaa taaataattt atgttacaac ataaaatttt aggactcgat
    10561 gtcggtagta gaacggtagg aattgcaatt agtgatataa tgggttggac ggcacaagga
    10621 ttagacacac tccgaatcaa tgaagaaaat aaagaattag gtattgacca attagtagac
    10681 attattaaaa aacataatgt gggtacagtc gtaataggac tacctaaaaa catgaataat
    10741 tcaataggat ttcgaggcga agcttcgtta acatataaag aaaaattatt agaagcttat
    10801 ccttctattg agattgtgat gtgggatgaa agattaagca caatggctgc tgaacgatca
    10861 ttattagaag cagatgtttc aagacaaaaa agaaaacaag tgattgataa aatggcagcg
    10921 gtatttattt tacaaggcta tttagattca ctacattaaa aggagatttt actatgactg
    10981 aacataatca tgattcacaa ctagaaatta ataacgaaga agaattatta actttattcg
    11041 atgaagaggg aaatgaagtt ttataccgaa aagttttaga attttatcat cctgaattca
    11101 aaaaagagta tgttatctta gctgaagaag gtgctcaatc agatgaagac gatatgattg
    11161 agcttgtacc aatgatcaat gaaccagatg agtcaggtga cggtggtaag ttagtaccaa
    11221 tcgaaactga tgaagaatgg gacatgattg aagaagttgt aaatactgaa atggaagaat
    11281 aattaaaaag attttactct tgctaacctt aaagatgggg aggcaagagt attttttaag
    11341 tcaagcaatg tataaataat taacgcttat aattttattg aaaatatggt aaaatatcta
    11401 aagttaaatt ttatatgaat gattcgcttc tataaataaa atagctttgc gtctaacacg
    11461 aaatcagtca tttaattggt tggcaaaatt ataatcaatt gtgaaggctg atttatttta
    11521 ttgtcataat catattgact tattttacat aaaggaagtt taaaacatgg atgacctaaa
    11581 taaaaaatat ttaatagatt tacatcaaca tcaaaatagt tcaatcgaag ttttgcgtga
    11641 atttgccgag gtaaatgaag tgccaattgt agatcgttta acattagatt taattaagca
    11701 attaattcgt atgaataatg ttaaaaatat tttagaaatt ggtacagcaa tcggctatag
    11761 ttctatgcaa ttcgcttcta tatctgatga cattcatgtc acaacgatag agcgtaatga
    11821 aacgatgatt caatatgcta aacaaaattt agctacttat cattttgaaa accaggttcg
    11881 aattattgaa ggtaatgctt tagagcaatt tgaaaatgta aatgacaaag tttatgatat
    11941 gatatttatt gatgcagcaa aagcgcaatc aaagaaattt tttgaaatat atacaccact
    12001 tttaaagcac caaggtctcg taattacaga taatgtttta tatcacggtt ttgtatcgga
    12061 tattgggatt gttagatcga gaaatgtaag acaaatggtt aaaaaggttc aagattataa
    12121 tgagtggtta ataaagcaac caggatatac aacgaatttt ttaaatatag acgatggatt
    12181 agcgatttca attaaaggag aatgactatg acagaattac ttgtcacacc caagtcatta
    12241 agccatatgg aaacacttat tgatttaggt gcagatgctt ttgtaattgg cgagcaaaag
    12301 tttggtttaa gacttccagg ggaattcaat agacaacaaa tgacagaggc tgtcgcatta
    12361 gctcacaaaa acgataaaaa agtatatgcg gcagtgaatg gattatttca taattatcat
    12421 ttagatgctg tagaagatta tattaatttt ttacatgaaa tacgagttga cagaattatt
    12481 ttcggggatc cagcagtagt aatgtatgtg aaggcgcaag aaaatccaat accacttcat
    12541 tggaatgcag agacgttagt aactaatcat tttcaatgta attactgggg taaaagaggc
    12601 gcatcaagag ctgtcttagc acgtgagctg aatttggatg aaattattaa tataaaagaa
    12661 aattcaaatg tggaaattga ggtgcaagtt caaggaatga cttgtatgtt tcaatcaaag
    12721 cgtatgctac taggcaatta ttatacgttc caagatcgcc aaatgaaaat tgaacgtcgc
    12781 aatgatgaac aatctttatt actttatgat gaagaaagac aaaataatta cccagtttac
    12841 gaagattaca atggtacgca cattatgtca ccaaacgaca tttgtttaat tgaagaatta
    12901 gcaccatttt ttgaggcggg tatagattca tttaaaatcg atggtattct acaaacggaa
    12961 gaatatatta atgtggtaac ggaacagtat cgtcaagcga tagatttgta caatgaagat
    13021 cctgaaatct atgaagatga gaaatttatg ttgatggatc caattgaaga aattcaacct
    13081 gatcatcgac catttgacga aggtttctta tataaacaaa cagtatatta aggaggttaa
    13141 tcatgaagac aatagaagag attaaatcaa ctcctaaaac agttatgaag aaaccagaat
    13201 tattagcacc tgctggaaac ttagaaaagt taaaaatagc agtacattat ggcgctgatg
    13261 ccgtattttt aggtggtcaa gaatatggat tacgttcaaa tgctgataat ttcacgatgg
    13321 aagaaatagc tgaaggtgtt gaatttgcga accgttacgg tgccaaaatt tatgttacga
    13381 caaatattat tgcacatgat gagaatattg aaggtctaga atcatatttg cgtaatttgg
    13441 aaaagactgg tgcgacaggt atcattgttg cagatccttt aattatcgaa acatgtaaag
    13501 aagttgcgcc aaaacttgaa attcatttat ctactcaaca atcactttct aattacaaag
    13561 ctgtagaata ttggaaagaa gaaggattgg atcgtgttgt attagcacgt gagaccggcg
    13621 cgatggaaat gcgtgaaatg aaggaaaaag tagatattga aatcgaagca tttattcatg
    13681 gtgctatgtg tatcgcctat tcaggtagat gtacattaag taatcatatg actgcaaggg
    13741 attccaacag aggcggttgc tgtcaaagtt gccgttggga ttatgaatta ttagaagttg
    13801 atgataatgg tgaacttgat gttttttata atcaaggtga agttacaccg tttgcgatga
    13861 gtcctaaaga tttaaaatta atcgaatcaa ttcctcaaat gatggatatt ggtgtggact
    13921 cattaaaaat tgaaggacgt atgaagtcaa ttcattatat tgcaacagtt gtctcagtat
    13981 atcgtaaagt cattgatgcg tatgcggcag atcctgacaa ctttaagatt aatccggaat
    14041 ggttaataga gttagataaa tgtgcaaata gagacactgc accagcattc tttgagggaa
    14101 cacctggtta tgaagaacag atgtttggtc aacaacaatc taaaaaatca ccatttgatt
    14161 tttgtggttt ggtattagac tataatgaag atacaaaaat tgcgactatt caacaacgaa
    14221 ataactttaa accaggtcaa gaaatagaat tctttggtcc agaaattgaa acatttacac
    14281 aagtagtaga agcaatttat gatgaagaag gtaacagctt agacgcggcg cgccatccat
    14341 tacaaatcgt tcaaattaaa gtggatcgcc cgatatatcc aaacaacatg atgagaaagg
    14401 aaattggcta atgaaagcta ctacaatcat tggcatagct ggtggatctg gctcaggaaa
    14461 aacaactgta actaacgaaa ttatgaaaaa cttagaaggt catagtgtcg ctttacttgc
    14521 tcaagattac tattataaag atcaaaagca cttgactttc gacgagcgcc tagaaaccaa
    14581 ttatgaccat ccatttgcat tcgataatga tttattaatt gaaaatctta aagacttgaa
    14641 aaatggtaaa gcagtagaag taccgacata tgattatgct agtcatacaa gaagtgacat
    14701 taccattgat tttaaaccta aagatgttat tatcgtagaa ggcattttcg ctttagaaaa
    14761 taaggtatta cgtgatatga tggatgttaa aatatatgtt gatacagatg cagacttgag
    14821 aatattacgc cgtttaacac gagatactaa agagcgtggg cgttcaatgg actctgttat
    14881 caatcaatat ttaagtgttg ttagacctat gcatgaccaa tttattgaac cgactaagaa
    14941 atatgctgat ataattattc ctgaaggtgg gagcaataaa gttgcaatag atattatgac
    15001 aacaaaaatt cagtctttag ttagcaagca atagtataat tcagtaaagg aagatgacaa
    15061 tatggaaaat caaaagcaat atccaatgac tcaagaaggt tttgaaaaat tagagcgtga
    15121 acttgaagaa ttaaaaacag ttaagcgtcc tgaagttgta gagaaaatta aagttgcacg
    15181 ttcatttggt gacttatcag agaactctga gtatgatgca gcaaaagatg aacaaggatt
    15241 catcgaacaa gatattcaaa gaattgagca tatgttaaga aatgcattaa tcattgaaga
    15301 tactggagat aacaacgttg ttaaaattgg taaaacagta acgtttgtag aattaccagg
    15361 tgatgaagag gaaagttatc aaatcgttgg ttcagctgaa tcagatgcat ttaatggtaa
    15421 gatttcaaat gaatcaccaa tggctaaagc gttaattggt aaaggtttag atgatgaagt
    15481 tcgtgttcca ctacctaatg gtggcgaaat gaacgtaaaa attgttaata tccaataaat
    15541 gatcaaatag attatttaat tgcgcgattg aagtgtgtta atgatacttc ggtcgtgctt
    15601 ttttatattc aaaatcaaaa aatcggacag atgaaaagta aaaattttcc atcagaccga
    15661 atgatagcag aacctaaatt agtgtaagag ttacaatatt aactactcca ttttaaaaaa
    15721 gcaaaatatt tccgagaaaa caaattgatt atcatttgtt attgtatgcg atttgaatta
    15781 cttattaaac aacttgtgct tctcaatgat acaatgaaaa ggtattcaat actggtttat
    15841 tgcaatacaa agggggattt aaagtggatg taagatttat taacgagcag acaattatga
    15901 tttattttga aaataaaata tccgaagaga catatcgtaa tgtcacagca atggtacggt
    15961 ggatacgaga aaaagaaata ttagaaattc aagatattgt cccttcgtat cgagcagttc
    16021 taatatattt tgatgaacaa gctataacat cttctaaatt aattgaaaat ttagaacttt
    16081 taatgaaaaa aatgttcatg ctgtgaatca aaccaatcgt attattaaaa tacctgttca
    16141 atatggtggt acatatggac cagatattga agaagtagca aagcataatc gaataactgt
    16201 tgagcaagtt attgaaaaac atacaagtaa accttattta atatatatgc taggatttat
    16261 gccaggattt ccatacttag gcggacttga tgaacaacta catacaccta gacgtaatca
    16321 gccaaggtta aaaattcatg caggttctgt aggtattgcg aataatcaaa caggactata
    16381 tccatcagat tctcctggcg gatggcaaat tattggacgc acaccgttaa aagtatttag
    16441 cagcgagcgt gaaccaatgt caatgtacga agcaggagaa tggatacaat tttatgcaat
    16501 agatgaacag aaatttatac aaatcgaaag agatatatca gatggcaact ttaatgttga
    16561 tgactgggtg gtgattgaaa atgtcaatta agattttaca accaggtctc ttttcaacgg
    16621 tacaagatct aggaagaata ggttatgaac atattggatt ttcaggcgca ggtgccatgg
    16681 atcaatttag ttttaaggtt gcgcagtcat taattaacaa tgatggtcca gcgattgaat
    16741 atactttgat tggtcctacc attcaattta atacgcaaaa tacatttgtt ataaccggtg
    16801 gtagtattaa tgcttcgcta aataataaaa ctatatcaat gaattctgtc atattagctg
    16861 agaaaggtga cattttaaaa ataggtgcta taaccaaagg tgcacgcggt tatcttactt
    16921 ttggtcattc tatcaacgta ccttctattg ctgaaagtta tgcaacacat acccgaagca
    16981 gtataggagg attcaaaggt agaaagttat tagctgatga tgtaataaca gtgaaaataa
    17041 ataatgactt taaagaaaac attggaaaga cgattcattt acaggacgat ttattgccag
    17101 aaaataatat tatacacatt cttcaaggac ctcaattcga ggcattttct gaagaggcta
    17161 gagcgaaaat tgtaaatcat ccatatttaa ttactgaaca atcagaccgt atgggctatc
    17221 gtttggaagg tgacagcgtt gcaccaatta atcaagcaga tatcatttct gaaccggttg
    17281 ctcttggtag tgttcaggta ccaaatgatg gtcaacctat tattctgctt aatgataaac
    17341 aaacgatagg tggttatacc aaaattgcaa ctgtatgcaa atttgatctg ccaaagttag
    17401 cacagatgaa accacaagat acaattcaat ttaaatggat atcattccaa gaagctgtag
    17461 ataagaatcg ggaacaaatg tctctgttta atgaaattct taagagtcat caaaagactc
    17521 caatttttga tacatctagc ttgcgacata cttcgaaaaa attagcaaca attttaaaag
    17581 gggatttgta aaatgaatat tgaaaaaatc gaacaaataa tcaaattagt gaaggaaaat
    17641 gatgttaaga aatttaaata taaaaatttt gaagatgaaa tagaaattga cttcactgac
    17701 tcgaatcatt tggctgcaca cagtaatcaa tcaaatcaaa gtatgaacaa taatgatttg
    17761 acagcttcaa aagcgaatga taactccgat gtttcgacaa atgattatca tgacattaaa
    17821 tcaccaatga taggtacatt ctttttacaa gatagtaaag aattaactga accaattgtg
    17881 aatgtcggtg acaaagttaa caagggagat attataggat atgttgaagc gatgaaagta
    17941 ttaaacgagg taacaacaga tgttgctgga gaaattactg aaatagtagc tgatcatggc
    18001 acaaatgttg aatacgacca agttttggta cgtattaagt aaagggggta agtaaatgct
    18061 tcgttgttta attgcgaaca gaggtgaaat tgctgtaagg attataagag cttgcagaga
    18121 atatgggatt gaaactgtag cagtttatgc aaaaggggac gagcaaagct tgcatgtaca
    18181 tttagcagat caagctatat gtattgggga agctaatgct ttagatagtt atttaaatat
    18241 tgaccgcatc atatctgctg cacaaatcac tggtgctaat gcaattcacc caggatatgg
    18301 ctttttatca gaatcaacaa aatttgctca aaccgttgag gaacaaggca tagcgtttat
    18361 agggcctact aaaaaaacga tggaaatgat gggggataaa ataacagcaa gacaaacagt
    18421 tcatcatgca ggtgttcctg tgattccagg atcaaatggt gctgtgaatc atgtgtctga
    18481 aattgagaat cttgccaaag acatcggtta tccagttgtt atcaaagctg ccagtggcgg
    18541 tggtggtaaa ggtatacgta ttgtaaagaa agctgaagat ttagaaaagg catttaaaga
    18601 agctaaaagt gaaggaaaaa aatactttga tgatgatcgt gtttatgttg aggcttttat
    18661 acctgttgca aaacatgttg aagttcaagt tatgggagat gggcaggata attatgtaca
    18721 tttaggggaa cgtgattgtt ctgtacaacg taaaaatcaa aaattaatcg aagaatctcc
    18781 ttgtgcagca ttaactgaag aaagacgaca acaaatatgt aacgatgctg ttaaagttgc
    18841 acgtgcagca aattatagaa gtgcaggtac gattgaattt ttagtaactg ataccgcaca
    18901 ttactttatt gaaatgaatg ctcgaataca agttgaacat actgttacag agatgcgagc
    18961 agaacgtgat ttggttgcag cacaactgta tttattggaa cataatcatt tacctttttc
    19021 acaaagcgat attcaattta atggtcatgt gatagaagcg agaataaatg ccgaaaatcc
    19081 tgaaaagaaa tttcaaccaa caccaggtaa agtgacagcg ttacatttac ctcaaggctt
    19141 taatgtgcga gtcgattctt tactatatca cggttatcaa gtttcaccat attatgattc
    19201 tttagtagct aaagtaattg taaaatctca tgatagagct tcagcaattg ataagttgaa
    19261 agtcacctta gatgaaatgg tgatagatgg attttctaca actgccgatt ttttatatgc
    19321 agttttaaat tatccactat atcgtgatgg agatgcaaaa gatgttgata ttaaattttt
    19381 agaaaaacat caaattgtta aaggggtgga attataatgc gagttgattt gaattgtgat
    19441 ttaggcgaag catttggaaa ttattacttt ggtggtgatc atcaaattat tccgttaatt
    19501 acaagtgcga atgttgcttg tggttttcac gctggtgatg aaaatgtaat gaatgaaacg
    19561 gtaaaacttg ccaaagcaca taatgttgca gtaggtgcac atcctggttt acctgatttg
    19621 aaaggctttg gcagacgaaa tatagatatc tctaacgacg agatttataa tttgatgatt
    19681 tatcaattag gtgcattaca agggttttgt cgcattcatc aagttaaaat taatcatgtt
    19741 aaaccgcatg gtgcattgta tcagatgggt gcaaaagaca gagaaatagc aaacgttata
    19801 gcacaagctg tttatgactt tgatccatca ctagtgttag taggattagc aaattcatat
    19861 ctaatttcag aagcaaagaa tgtcggatta attacagctt ctgaagtgtt tgctgataga
    19921 cgatacgaag atgatgggca gctcgttagt agaaaagaaa gtgatgctgt gattactgat
    19981 actgacgaag cacttaagca ggttttaaag atggtgaagg aaaataaagt tatttcaaaa
    20041 aacaataagg aagtaacgtt acaagcagat acaatttgtg tgcatggtga tggagaacat
    20101 gcattattat ttgtttcgaa aattagagaa attttaatga aagaaggcat tgatattcaa
    20161 tccttatagg gggctaaaaa aatggggaga aatttaaagc ttaaaaaaga aagtgacttt
    20221 gaattcacaa aaaatcataa aaggttatta ttaggttctg tatttttgat ggcaacttct
    20281 gcaattgggc cagcattttt aacgcaaaca gcagtattta catcacaatt ttttgcaagt
    20341 ttcgcatttg ccatattact gtctatcatc attgacattg gtgcacaaat taatatatgg
    20401 cgcatattag ttgtaactgg tttaagaggt caagaaatat caaaaaaagt tgttcctggg
    20461 cttggtactg ttatctcaat attgattgca tttggtggtc tagcttttaa tattggtaat
    20521 attgctggtg ccggtttagg tttaaatgca atttttggat tagatgtaaa atggggcgca
    20581 gctattactg caatctttgc aatattaatc tttgtaagta aaagtggcca aaaaattatg
    20641 gacgttgttt caatgattct tggtattgtg atgattttag ttgtggcata tgtgatgttt
    20701 gtttctaatc caccttatgg tgatgctttt gtgcatacat ttgcgccaga acatccaatg
    20761 aaattagtct tgcccatcat tacgttagtt ggtggaactg taggtggtta tattaccttt
    20821 gcaggtgcac atcgtatatt agactctggc attaaaggta agcaatattt accatttgta
    20881 aatcaatcag caattgctgg tattttaact acaggtatta tgagaacgtt actattccta
    20941 gcggtattag gagttgttgt aacaggtgtg acactaagtt ctgaaaatcc accagcgtca
    21001 gtttttgaac acgcaattgg accaattgga aagaatattt ttggtattgt gttatttgct
    21061 gcagctatgt catcagtaat tggctcagca tacacaagcg caacattttt aaaaacactt
    21121 cataaatcac ttaacgaaag aagtaattta attgtgattg tgtttatcgt tatttcaaca
    21181 atgattttct tatttattgg aaaaccaatc agccttttaa ttatagcagg cgcgataaat
    21241 ggatggattt tacctattac gttaggtgca attttgattg caagtaaaaa gaaatcaatt
    21301 gttggtgatt ataaacaccc aaattggatg ttcatctttg gtatcgttgc agtacttgtt
    21361 acaatattga caggtatatt ctcattcaaa gaagtacttc agttatttta aaagacattt
    21421 cgactaatag catcactgta aatgttgtta gtattaggca agatatattt tgatttccgg
    21481 tgattcattt ataaagcata attagatata ttttaaggga gagtggtgca tgacaaatgt
    21541 actgctcttt ttgttgtgat gaaaaatctt tttctattga ttgagaaaat agttatttat
    21601 atagttttta aagaaaaaaa gtgataatat ttagctaatc taatgaaaat tgatttattg
    21661 gacaaaaaat acattttaaa tgagtagagg aggctgcaaa tgggttacag aactttaaaa
    21721 agtatttttc atgaacacaa tgaaagtaaa atgaaggaag agtatattaa aagatttaat
    21781 tctttagctt ctttcaatac taatattaat atcataccta tggaaaatgg aaaaaaagtt
    21841 aatgatttgg aatatcctct attctttatg gtgactaaaa atctatcaaa aaaacaagaa
    21901 ttaatatcaa ttaatagtag aaaaattgat agagcactta attctttacc atatgcagct
    21961 agagaacaat attttaatga tttattaatc gatgaattac aaagtactaa tgaaattgaa
    22021 aatgtattta gtactaaaca agagattgca catgcgttaa ataaccaagc atcagaattt
    22081 cttaagttca gaggcctcgt ggatcaatat aaagagatag aacttaataa aaaaattaaa
    22141 gttgataatg taagagacat tagagcgatt tatgataaat tagtttcaaa tgaaattaac
    22201 gaacaagata agttagatgg agagctattt cgtaaaaatt ttgtcggtgt gcatgatggg
    22261 tcaacgaata aatatataca tgttgggtta caacctgaaa ccaaaattgt tgaatttata
    22321 ggtgaaatgc taacattttt aaaatatttt gatgcgcctc agccgttcaa aatcatggct
    22381 agtcattatc tgtttgaata tatacatcct ttttatgatg gcaatggtag agttggaaga
    22441 tttataattg ccaagctctt gagtgattat tatgataatt atactgcttt gacattttca
    22501 tatgttataa atagaaataa atcgaaatat tacaaggcgt ttatgactgc ttcaaatcat
    22561 ttgaattgtg gtgatttgac ggaatttatt gacacaatgc ttgagctatt gatagcagga
    22621 caagaaagaa tacttgatga gttaatacca aaaatggatg cgactgaaaa attaacgctt
    22681 tatttaact
//
LOCUS       DALPQQ010000029        22242 bp    DNA     linear   BCT 22-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus strain K18-6-464
            SAMD00233528-rid16434743.denovo.029, whole genome shotgun sequence.
ACCESSION   DALPQQ010000029 DALPQQ010000000
VERSION     DALPQQ010000029.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMD00233528
            Sequence Read Archive: DRR236061
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 22242)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 22242)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001543423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001543423.1
            Genome Coverage       :: 77x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/22/2022 17:09:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,811
            CDSs (total)                      :: 2,743
            Genes (coding)                    :: 2,689
            CDSs (with protein)               :: 2,689
            Genes (RNA)                       :: 68
            rRNAs                             :: 2, 4, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 4, 2 (16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 54
            CDSs (without protein)            :: 54
            Pseudo Genes (ambiguous residues) :: 0 of 54
            Pseudo Genes (frameshifted)       :: 27 of 54
            Pseudo Genes (incomplete)         :: 27 of 54
            Pseudo Genes (internal stop)      :: 10 of 54
            Pseudo Genes (multiple problems)  :: 10 of 54
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..22242
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMD00233528-rid16434743.denovo.029"
                     /strain="K18-6-464"
                     /db_xref="taxon:1280"
                     /geo_loc_name="Japan: Niigata"
     gene            71..511
                     /locus_tag="O7798_000989"
     CDS             71..511
                     /locus_tag="O7798_000989"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499276.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DM13 domain-containing protein"
                     /protein_id="HDC2863256.1"
                     /translation="MNTKYFLAAGAVITTLALGACGNSNSQDQGNKTEQKTKSEDSNV
                     KTDKTKHLTGTFSSKNGETVEGKAEIKNGKLMLTNYKSSKGPDLYVYLTKNGDIKNGK
                     EIAMVDYDKEKQTFDLKNVDLSKYDEVTIYCKKAHVIFGGAKLK"
     gene            853..1326
                     /locus_tag="O7798_000990"
     CDS             853..1326
                     /locus_tag="O7798_000990"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499275.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DoxX family protein"
                     /protein_id="HDC2863257.1"
                     /translation="MNKLLLLVTFIIRVGSGIVMLMQGYEKLTGGFTLKGLVPVIANN
                     TDSPEWYKWFFANIVAHTTSLFDIVVPLGEIAIGLGLIFGVFAYAASFFGAFVMINYI
                     LADMIFTYPLQLTFFILLLMSHSLLKQISLKEIINYFRGRKNRGEKIDDPLTDRG"
     gene            1301..1987
                     /locus_tag="O7798_000991"
     CDS             1301..1987
                     /locus_tag="O7798_000991"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499274.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HDC2863258.1"
                     /translation="MTHLLIVDDEQDIVDICQTYFEYEGYKVTTTTSGKEAISLLSND
                     IDIMVLDIMMPEVNGYDIVKEMKRQKLDIPFIYLTAKTQEHDTIYALTLGADDYVKKP
                     FSPRELVLRINNLLTRMKKYHHQPVEQLSFDELTLINLSKVVTVNGHEVPMRIKEFEL
                     LWYLASRENEVISKSELLEKVWGYDYYEDANTVNVHIHRIREKLEKESFTTYTITTVW
                     GLGYKFERSR"
     gene            1987..3042
                     /gene="saeS"
                     /locus_tag="O7798_000992"
     CDS             1987..3042
                     /gene="saeS"
                     /locus_tag="O7798_000992"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499273.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-component system sensor histidine kinase
                     SaeS"
                     /protein_id="HDC2863259.1"
                     /translation="MVLSIRSQIIIGVVSSILLTSTILAIAYILMWFNGHMTLTLTLT
                     TIITSCLTLLICSIFINPLIQKIKQFNIKTKQFANGNYASNDKTFNSPKEIYELNQSF
                     NKMASEITQQMNQIKSEQQEKTELIQNLAHDLKTPLASIISYSEGLRDGIITKDHEIK
                     ESYDILIKQANRLSTLFDDMTHIITLNTGKTYPPELIQLDQLLVSILQPYEQRIKHEN
                     RTLEVNFCNEIDAFYQYRTPLERILTNLLDNALKFSNVGSRIDINISENEDQDTIDIA
                     ISDEGIGIIPELQERIFERTFRVENSRNTKTGGSGLGLYIANELAQQNNAKISVSSDI
                     DVGTTMTVTLHKLDITS"
     gene            complement(3114..4097)
                     /gene="csbB"
                     /locus_tag="O7798_000993"
     CDS             complement(3114..4097)
                     /gene="csbB"
                     /locus_tag="O7798_000993"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499272.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoteichoic acid-specific glycosylation protein
                     CsbB"
                     /protein_id="HDC2863260.1"
                     /translation="MKIRVVIPCFNEGEVITQTHQQLTEILSQDSSVKGYDYNMLFID
                     DGSTDTTIDEMQHLATIDRHVSFISFSRNFGKEAAMIAGYQHSTEFDAVIMIDCDLQH
                     PPEYIPKMVEGFMEGYDQVIAKRDRSGENFSRKTLSHLYYKLVNCFVEEVQFDDGVGD
                     FRLLSQRAVKSIASLEEYNRFSKGLFEWIGYNTKVFTYQNVERQKGESKWSFKKLFNY
                     GIDGLISFNSKPLRMMIYLGLFIFSISVLYIIYLFINIMISGVNIPGYFSTIAAILLL
                     GGIQLISIGVVGEYIGRIYYEVKARPKYIIQATNLSSLENDEKDTHKVYSK"
     gene            complement(4229..5068)
                     /locus_tag="O7798_000994"
     CDS             complement(4229..5068)
                     /locus_tag="O7798_000994"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499271.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aldo/keto reductase"
                     /protein_id="HDC2863261.1"
                     /translation="MLNEIQILNNGYPMPSVGLGVYKISDEDMTKVVNAAIDAGYRAF
                     DTAYFYDNEASLGRALKDNGVDREDLFITTKLWNDYQGYEKTFEYFNKSIENLQTDYL
                     DLFLIHWPCEADGLFLETYKAMEELYEQGKVKAIGVCNFNVHHLEKLMAQSSIKPMVN
                     QIEVHPYFNQQELQEFCDRHDIKVTAWMPLMRNRGLLDDPVIVKIAEKYHKTPAQVVL
                     RWHLAHNRIIIPKSQTPKRIQENIDILDFNLELTEVAEIDALNRNARQGKNPDDVKIG
                     DLK"
     gene            complement(5290..6639)
                     /locus_tag="O7798_000995"
     CDS             complement(5290..6639)
                     /locus_tag="O7798_000995"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499270.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HlyC/CorC family transporter"
                     /protein_id="HDC2863262.1"
                     /translation="METSTIISLIIFILLIALTTVFVGSEFALVKIRATRIEQLADEG
                     NKPAKIVKKMIANLDYYLSACQLGITVTSLGLGWLGEPTFEKLLHPIFEAINLPTALT
                     TTISFAVSFIIVTYLHVVLGELAPKSIAIQHTEKLALVYARPLFYFGNIMKPLIWLMN
                     GSARVIIRMFGVNPDAQTDAMSEEEIKIIINNSYNGGEINQTELAYMQNIFSFDERHA
                     KDIMVPRTQMITLNEPFNVDELLETIKEHQFTRYPITDDGDKDHIKGFINVKEFLTEY
                     ASGKTIKIANYIHELPMISETTRISDALIRMQREHVHMSLIIDEYGGTAGILTMEDIL
                     EEIVGEIRDEFDDDEVNDIVKIDNKTFQVNGRVLLDDLTEEFGIEFDDSEDIDTIGGW
                     LQSRNTNLQKDDYVDTTYDRWVVSEIDNHQIIWVILNYEFNEARPTIGQSDEDEKSE"
     gene            complement(6860..8041)
                     /gene="nagA"
                     /locus_tag="O7798_000996"
     CDS             complement(6860..8041)
                     /gene="nagA"
                     /locus_tag="O7798_000996"
                     /EC_number="3.5.1.25"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499269.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetylglucosamine-6-phosphate deacetylase"
                     /protein_id="HDC2863263.1"
                     /translation="MSELIIYNGKVYTEDGKIDNGYIHVKDGQIVAIGEVDDKAAIDN
                     DTTNKIQVIDAKGHHVLPGFIDIHIHGGYGQDAMDGSYDGLKYLSENLLSEGTTSYLA
                     TTMTQSTDKIDNALTNIAKYEAEQDVHNAAEIVGIHLEGPFISENKVGAQHPQYVVRP
                     FIDKIKHFQETANGLIKIMTFAPEVEGAKEALETYKDDIIFSIGHTVATYEEAVEAVE
                     RGAKHVTHLYNAATPFQHREPGVFGAAWLNDALHTEMIVDGTHSHPASVAIAYRMKGN
                     ERFYLITDAMRAKGMPEGEYDLGGQKVTVQSQQARLANGALAGSILKMNHGLRNLISF
                     TGDTLDHLWRVTSLNQAIALGIDDRKGSIKVNKDADLVILDDDMNVKSTIKQGKVHTF
                     S"
     gene            complement(8349..10307)
                     /locus_tag="O7798_000997"
     CDS             complement(8349..10307)
                     /locus_tag="O7798_000997"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499267.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS sugar transporter subunit IIA"
                     /protein_id="HDC2863264.1"
                     /translation="MRVTELLTKDTIAMDLMANDKNGVIDELVNQLDKAGKLSDVASF
                     KEAIHNRESQSTTGIGEGIAIPHAKVAAVKSPAIAFGKSKAGVDYQSLDMQPAHLFFM
                     IAAPEGGAQTHLDALAKLSGILMDENVREKLLHASSPEEVLAIIDEADDEVTKEEEAE
                     AEAQQVATAEQSSKQSNEPYVLAVTACPTGIAHTYMARDALKKQADKMGIKIKVETNG
                     SSGIKNHLTEQDIENATGIIVAADVHVETDRFDGKNVVEVPVADGIKRPEELINKALD
                     TSRKPFVARDGQRKGNSNDSQEKLSPGKAFYKHLMNGVSNMLPLVISGGILMAIVFLF
                     GANSFNPKSSEYNAFAEQLWNIGSKSAFALIIPILSGFIARSIADKPGFASGLVGGML
                     AISGGSGFIGGIIAGFLAGYLTQGVKAMTRKLPQALEGLKPTLIYPLLTVTATGLLMI
                     YAFNPPASWLNHLLLDGLNNLSGSNIVLLGLVIGAMMAIDMGGPFNKAAYVFATGALI
                     EGNAAPITAAMIGGMIPPLAIATAMLIFRRKFTKEQRGSIIPNYVMGMSFITEGAIPF
                     AAADPLRVIPSMMIGSGIGGAIALGLGSRITAPHGGIIVIVGTDGAHLLQTLIALLVG
                     TLVSALIYGLIKPKLTETEIEASKSMDE"
     gene            complement(10313..11233)
                     /gene="pfkB"
                     /locus_tag="O7798_000998"
     CDS             complement(10313..11233)
                     /gene="pfkB"
                     /locus_tag="O7798_000998"
                     /EC_number="2.7.1.56"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499266.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="1-phosphofructokinase"
                     /protein_id="HDC2863265.1"
                     /translation="MIYTVTFNPSIDYVIFTNDFKIDGLNRATATYKFAGGKGINVSR
                     VLKTLDVESTALGFAGGFPGKFIIDTLNNSAIQSNFIEVDEDTRINVKLKTGQETEIN
                     APGPHITSTQFEQLLQQIKNTTSEDIVIVAGSVPSSIPSDAYAQIAQITAQTGAKLVV
                     DAEKELAESVLPYHPLFIKPNKDELEVMFNTTVNSDTDVIKYGRLLVDKGAQSVIVSL
                     GGDGAIYIDKEISIKAVNPQGKVVNTVGSGDSTVAGMVAGIASGLTIEKAFQQAVACG
                     TATAFDEDLATRDAIEKIKSQVTISVLDGE"
     gene            complement(11230..11994)
                     /locus_tag="O7798_000999"
     CDS             complement(11230..11994)
                     /locus_tag="O7798_000999"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499265.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DeoR/GlpR transcriptional regulator"
                     /protein_id="HDC2863266.1"
                     /translation="MMIITEKRHELILEELSHKDFLTLQELIDRTGCSASTIRRDLSK
                     LQQLGKLQRVHGGAMLKENRMVEANLTEKLATNLDEKKMIAKIAANQINDNECLFIDA
                     GSSTLELIKYIQAKDIIVVTNGLTHVEALLKKGIKTIMLGGQVKENTLATIGSSAMEI
                     LRRYCFDKAFIGMNGLDIELGLTTPDEQEALVKQTAMSLANQSFVLIDHSKFNKVYFA
                     RVPLLESTTIITSEKALNQESLKEYQQKYHFIGGTL"
     gene            complement(12244..12726)
                     /gene="ybaK"
                     /locus_tag="O7798_001000"
     CDS             complement(12244..12726)
                     /gene="ybaK"
                     /locus_tag="O7798_001000"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499264.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Cys-tRNA(Pro) deacylase"
                     /protein_id="HDC2863267.1"
                     /translation="MAKNKKTNAMRMLDRAKIKYEVHSFEVPEEHLSGQEVAELIQAN
                     VKTVFKTLVLENTKHEHFVFVIPVSETLDMKKAAALVGEKKLQLMPLDNLKNVTGYIR
                     GGCSPVGMKTLFPTVVDKSCENYSHISVSGGLRTMQITIAVEDLITITKGKIGAVIHE
                     "
     gene            complement(12900..13352)
                     /locus_tag="O7798_001001"
     CDS             complement(12900..13352)
                     /locus_tag="O7798_001001"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499263.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDC2863268.1"
                     /translation="MTVKNLFLGFVAVILTVCLIGLLILATNEDALAKVHKTINTLNA
                     INVSTEDTYKKKMDILNIHTAKASEVNENVKKQNHFKHRVNANKSNSFNEQECQVIAD
                     RYADKHINDNYGLERISKTNHGYNYVYSNDNSTSKQHVSISNQGIITK"
     gene            complement(13645..14811)
                     /gene="norA"
                     /locus_tag="O7798_001002"
     CDS             complement(13645..14811)
                     /gene="norA"
                     /locus_tag="O7798_001002"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499262.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux MFS transporter NorA"
                     /protein_id="HDC2863269.1"
                     /translation="MNKQIFVLYFNIFLIFLGIGLVIPVLPVYLKDLGLTGSDLGLLV
                     AAFALSQMIISPFGGTLADKLGKKLIICIGLILFSVSEFMFAVGHNFSVLMLSRVIGG
                     MSAGMVMPGVTGLIADISPSHQKAKNFGYMSAIINSGFILGPGIGGFMAEVSHRMPFY
                     FAGALGILAFIMSIVLIHDPKKSTTSGFQKLEPQLLTKINWKVFITPVILTLVLSFGL
                     SAFETLYSLYTADKVNYSPKDISIAITGGGIFGALFQIYFFDKFMKYFSELTFIAWSL
                     LYSVVVLILLVFANDYWSIMLISFVVFIGFDMIRPAITNYFSNIAGERQGFAGGLNST
                     FTSMGNFIGPLIAGALFDVHIEAPIYMAIGVSLAGVVIVLIEKQHRAKLKEQNM"
     gene            15020..15442
                     /locus_tag="O7798_001003"
     CDS             15020..15442
                     /locus_tag="O7798_001003"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499261.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding protein"
                     /protein_id="HDC2863270.1"
                     /translation="MKLQKSNHTILLVLEKGEDIVECITTFADDQDLTFTSVSGIGAC
                     DDVVLKFFNLTTKQYEEKHITEPLELTSLLGNISRLDNGHFAHLHATFGTQSYETFSG
                     HLAKAIVSATAEIILTLTDLDIQRSFKDAVGLNLLDPQ"
     gene            15628..16245
                     /locus_tag="O7798_001004"
     CDS             15628..16245
                     /locus_tag="O7798_001004"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499260.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1361 domain-containing protein"
                     /protein_id="HDC2863271.1"
                     /translation="MQSRYIARIYFLILFIVSLFETKIFQFMTLNLFLAYIPFELSLL
                     LRLFKPNKKYEWPLFIIYSFIFVLLLPNTFYMVTDLIHLNQFQFNFYAGLNLSEWKYF
                     TYLLLGVFLAVYVMILIYFEILTLTSHRWLNRLIVVVLMFLNGFGIYIGRFLRLHSVY
                     FFNEPLHVLNHILESLTLKTAMFVCFMVVMQAAILLFGKGVRLNK"
     gene            16242..16526
                     /locus_tag="O7798_001005"
     CDS             16242..16526
                     /locus_tag="O7798_001005"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000154460.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDC2863272.1"
                     /translation="MTINIIVLIVSIIVFQLIIGHIWHDIGLSYLRSILLMMLPFGLG
                     VFIQQVSYYERQYPKWQVPQNIKVRLKYIYLATFLEYVVLYLTLFTDILR"
     gene            complement(16681..18054)
                     /locus_tag="O7798_001006"
     CDS             complement(16681..18054)
                     /locus_tag="O7798_001006"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499258.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="deoxyribodipyrimidine photo-lyase"
                     /protein_id="HDC2863273.1"
                     /translation="MAIAVLLNRMFRMEHNPLFEYIYQQKEDIDACYFIIPEEDMSSA
                     SDLKAQFYRGTLQRFYQSLHAEKLTPYVMSYDDIISFCKENNISEVVTAGDIMSYHLE
                     EYDILHQRSLFNEARIAVTLIRGNHYFKASKTMNQQGEPYNVFTSFYKKWRPYLRHRD
                     VYHYDLKSFEDFVIASPDDLVFDDIAFGSSQIIEQNKWQHFLDQDIQNYESGRDYLPE
                     VLTSQLSVALAYGLLDIIEIFNDLLARYDEDEANYEAFIRELIFREFYYVLMTQYPET
                     SYQAFKPKYRQIKWSQNEADFNAWCEGQTGFPIIDAAIMELTQTGFMHNRMRMVVSQF
                     LTKDLFIDWTWGEKFFRKHLIDYDAASNIHGWQWSASTGTDAVPYFRMFNPIRQSERF
                     DAKALYIKTYLPIFNQIDAKYLHDTQRNESNLFEQGIELGSHYPRQMVDHQEKRTQVL
                     ATFKALD"
     gene            complement(18140..19693)
                     /locus_tag="O7798_001007"
     CDS             complement(18140..19693)
                     /locus_tag="O7798_001007"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499257.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DASS family sodium-coupled anion symporter"
                     /protein_id="HDC2863274.1"
                     /translation="MSEEKHVVEHEQQKKEKTKKQYKPFWIVMSFIILIVVLLLPAPS
                     SLPIMAKAVLAILAFAVIMWVTEAVSYPVSATLIIGLMILLLGFSPVQNLGEKLGNPK
                     SGSAILAGSDLLGTNHALSLAFSGFATSAVALVAAALFLAAAMQETNLHKRLALLVLS
                     IVGNKTRNIVIGAIIVSIVLAFFVPSATARAGAVVPILLGMIAAFKVSKDSKLASLLI
                     ITSVQAVSIWNIGIKTAAAQNIVAINFINHQLGFDVSWGEWFLYAAPWSIVMSVALYF
                     IMIKVMPPEINTIEGGKDLIKEELHKLGPVSPREWRLIVISMLLLLFWSTEKVLHPID
                     SASITIIALGVMLMPKIGVMTWKHVENKIPWGTIIVFGVGISLGNVLLKTGAAQWLSD
                     QTFGVLGLKHLPIIATIALITLFNILIHLGFASATSLSSALIPVFISLTSTLHLGDQS
                     IGFVLIQQFVISFGFLLPVSAPQNMLAYGTGTFTVKDFLKAGIPLTIVGYILVIVFSM
                     TYWKWLGLL"
     gene            complement(19976..20263)
                     /locus_tag="O7798_001008"
     CDS             complement(19976..20263)
                     /locus_tag="O7798_001008"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499256.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDC2863275.1"
                     /translation="MTNEDKRFEQLRFERKFIVIPYLIYAVIVLLLNIFYSDLKITMT
                     LFGLFFAYNVVILFIAFVKHYKRTLLLSLILTVLSGAAFFGIIYVYGINHF"
     gene            complement(20298..21206)
                     /locus_tag="O7798_001009"
     CDS             complement(20298..21206)
                     /locus_tag="O7798_001009"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499255.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aldo/keto reductase family oxidoreductase"
                     /protein_id="HDC2863276.1"
                     /translation="MEQIMINHYVHFSRLVQGFWRANEWKMTAKELNYFINELVERGI
                     TTMDHADIYRDYQCESLFGNALDLSPELRNKIQIVTKCGIILPSKQFDFTNGHRYDLS
                     SKHIVKSVEQSLINLNVDYLDSLLIHRPSPLMDPEQVADALTKLVKQGKLKSFGVSNF
                     NHSQYQLLNQYIMKERLHISINQLELSPYHVDSLQDGTMDSMYQNHVQIMAWSPFAGG
                     KIFDKEDIKAQRIMKVVQSIADKYGVSDTAVMIAWLVKIPHRIMPILGTSQLKRIDQA
                     IEGLQLNLDDQSWFDIYTAIIGQDIP"
     gene            complement(21309..22235)
                     /locus_tag="O7798_001010"
     CDS             complement(21309..22235)
                     /locus_tag="O7798_001010"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499254.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GTP-binding protein"
                     /protein_id="HDC2863277.1"
                     /translation="MKNNKDEKIRISIINGFLGSGKTTLLTHYISELLKNDEKIKIIM
                     NEFGTFDIDSNSISNEIEVHSLINGCVCCDLKQELVYELKAIALKGDVNHVIIEATGI
                     AHPLELLVACQDPQIVNFFEKPIIYGVLDATRFLERHQYTENTVSLMEDQLKLSDMII
                     INKIDLITDDSLEKIDKQLGMICASIPTYKTTYGKVSLEELDLTVKDREISSHHHHHH
                     GIKSMTYTFTGPIDRHLFYQFIMKLPESVLRLKGYVSFRDQPNAIYEFQYAYGLPDYG
                     IIGMQLPLTIVIIGETLDTNHIRNQLDMLQFT"
BASE COUNT         7401 a         4080 c         3100 g         7661 t
ORIGIN      
        1 ttagttaatg gcatattatt tgccttcatt ttaaacttaa cttatcaaat tgaagaaatg
       61 aggagttagc atgaatacaa aatatttttt agcagctggt gctgttatca caacattagc
      121 tttaggtgct tgtggtaatt ctaattcaca agatcaaggt aacaaaactg aacaaaaaac
      181 aaagtcagaa gatagcaatg ttaaaactga taaaacaaaa cacctaacag gtacattcag
      241 ttctaaaaac ggtgaaactg ttgaaggtaa agctgagatt aaaaatggta aattaatgct
      301 tactaactac aaatcatcaa aaggtccaga tttatacgtc tacctaacaa aaaatggcga
      361 cattaaaaac ggtaaagaaa tcgcaatggt tgactacgat aaagaaaaac aaacatttga
      421 tcttaaaaat gtagatttaa gcaaatatga tgaagtaaca atctattgta aaaaagctca
      481 cgtcatcttc ggcggcgcta aattaaaata atcaatttct gagttaaact tttatttaca
      541 acatactatt actatacatt acaaatttct aaaatataca ttacactcat tactcaatgg
      601 aaagcgtatg atttcacagc ccccctagct tgtagaaatc atactttcct tttttcaata
      661 tatatacaac tattaaatcc cataagattg cagagcacat aagtaaattt ttttagagct
      721 tgaggtttgt ttagcttaag caacccatga gctcaaacac ttcctgttca cataacacta
      781 caaatcgcat tatgttgctt aatcttatgt ttatataaat tacacacaat aaatagaaag
      841 aatgtgaaca tcatgaataa attattgcta ctcgttacat ttatcattcg tgtgggttca
      901 ggtattgtta tgttaatgca aggctacgaa aaattaacgg gcggatttac gctgaaaggt
      961 ttagtaccag tcatcgctaa caatactgat tcaccagagt ggtataagtg gtttttcgca
     1021 aatatagttg cacatacgac gtcattattt gatattgttg tcccactcgg agagattgca
     1081 attggattag gtttaatttt tggagttttt gcatatgctg ctagtttctt tggagccttt
     1141 gttatgataa attatatctt agcagatatg atatttacgt atcctcttca attaactttc
     1201 tttatccttt tactaatgag tcactcattg ttaaaacaga tttcacttaa agaaatcatt
     1261 aattacttta gaggtcgtaa gaacagaggt gaaaaaatag atgacccact tactgatcgt
     1321 ggatgatgaa caagacattg tagacatttg tcaaacctat tttgaatatg aaggttacaa
     1381 agtaacaacg acaactagcg gtaaagaagc aatttcttta ctatcaaatg atattgatat
     1441 catggtactt gatatcatga tgccagaagt taatggttac gacattgtca aagaaatgaa
     1501 aaggcaaaaa ttagatatcc cctttatcta tttaactgcc aaaacacaag aacatgatac
     1561 catttacgcc ttaactttag gtgcagatga ctatgtcaaa aaaccattta gtccaaggga
     1621 actcgtttta cgtattaata atttacttac aagaatgaag aaataccatc atcaaccagt
     1681 tgaacaactg tcgtttgatg aattaacact tattaactta agtaaagttg tgactgtaaa
     1741 tggtcacgaa gtccctatgc gtattaagga atttgagtta ttgtggtatt tagcttctag
     1801 agaaaatgaa gttatttcta aatcagaatt acttgaaaaa gtttggggat atgactatta
     1861 cgaagatgct aataccgtga atgtccatat acaccgtatt agagaaaaat tagaaaaaga
     1921 gagctttaca acatatacca tcacaactgt atggggatta ggatataaat ttgaaaggag
     1981 ccgataatgg tgttatcaat tagaagtcaa atcattattg gcgtcgtatc gagtatacta
     2041 ttaacttcaa ctattttagc aattgcatat attttaatgt ggtttaacgg ccatatgaca
     2101 ctaactttga ccttaacgac aataattaca agctgtttaa ccttattaat atgtagtatt
     2161 tttattaatc cacttataca aaaaattaag cagtttaata taaaaactaa gcaatttgct
     2221 aacggaaatt acgcaagcaa tgataaaacg tttaattcac caaaagaaat ttatgaatta
     2281 aatcaatctt ttaataaaat ggcttctgaa attacgcaac aaatgaatca aattaaatcc
     2341 gaacaacaag aaaaaacaga actgattcaa aacttagccc atgatttaaa aacaccttta
     2401 gcaagcatta tttcatattc tgaaggacta cgtgatggta taatcactaa ggatcatgag
     2461 attaaagagt catacgacat attaattaaa caagcaaaca gattatcaac attatttgat
     2521 gatatgactc atattatcac tttaaataca ggtaaaacat atcccccaga attaatacaa
     2581 ctagaccaat tacttgtatc aatattgcaa ccatatgagc aacgtatcaa acatgaaaac
     2641 cgcacattag aagtgaattt ctgtaacgaa attgatgcat tttatcaata tcgaacgcca
     2701 cttgagcgta ttttaacaaa cttacttgat aatgcgctaa aattttcaaa tgttggtagt
     2761 cgcattgata ttaatattag tgaaaacgaa gatcaagata ctatcgacat tgctattagc
     2821 gatgaaggta ttggcattat accagaacta caagaacgta tattcgaacg tacattcaga
     2881 gtagaaaact ctcgtaatac aaaaacgggt ggttctggat taggcttata tatagctaat
     2941 gaactcgcgc aacaaaataa cgcaaaaatc agtgtaagca gtgatataga tgtaggaact
     3001 acgatgactg taacattaca caaattagac attacgtcat aatccgattt atttataaaa
     3061 taaaatgcaa agactaaaaa gaagctccca ttaatgaggg cttctttttt tgtttattta
     3121 gaataaactt tatgggtatc cttctcatca ttttcaagac ttgaaagatt tgtagcttga
     3181 ataatatatt taggacgtgc cttaacttca taatatatcc tgccaatata ttcacctaca
     3241 acaccaattg aaattaactg tatgccgcct aataataaaa tagctgcaat cgttgaaaaa
     3301 tatcccggaa tattaacacc agatatcata atattgatga ataaatagat aatatataac
     3361 acgcttattg aaaagataaa caagccaaga taaatcatca ttctcaaagg tttactatta
     3421 aaggaaatca atccatcaat accataatta aataactttt taaaggacca cttagattcc
     3481 cctttttgtc tctcaacatt ttgatacgta aacactttag tattatagcc tatccattca
     3541 aataaccctt ttgaaaatcg attatattct tcaagtgatg caatggattt aacagctctt
     3601 tggcttaaaa gtctaaaatc accaacacca tcatcaaatt gtacttcttc tacaaagcaa
     3661 ttaactaact tataatacaa atggcttaat gttttgcgac taaaattttc accacttcta
     3721 tcacgctttg caatcacttg atcatagcct tccataaaac cttcaaccat tttcggaata
     3781 tattcaggtg gatgttgcaa atcacaatct atcatgatga ctgcatcaaa ttcagtacta
     3841 tgctggtaac ctgcaatcat agctgcttct tttccaaaat ttctactaaa agaaataaag
     3901 ctgacatgcc tatctattgt ggcaagatgt tgcatttcat ctatagtggt atccgtacta
     3961 ccatcatcta tgaaaagcat attataatca tagcctttca cactactatc ttgtgaaagt
     4021 atttcagtta attgttgatg tgtttgtgta atgacttccc cttcattaaa acaaggaatg
     4081 acgactctaa ttttcatcta tgtccatcct ttttatttaa aagattttga atgtacctga
     4141 gtattgtttt atcaaatagt aaaaaccaac tcatttattt taatgtacac attaaaaggc
     4201 attcataaac gtaaaattta acatccagtt attttaaatc cccaattttc acatcatctg
     4261 gatttttacc ttgtcttgca tttctattta aagcatcaat ttcagctact tctgttaatt
     4321 ctaaattaaa atctaaaata tctatatttt cttgaatgcg tttaggtgtc tgagattttg
     4381 gaataataat tctattgtgt gctaaatgcc aacgtaatac aacttgtgct ggtgttttat
     4441 gatatttttc agcaatttta acaatgacag ggtcgtctag tagtcctcta tttctcatca
     4501 aaggcatcca tgcagtcact ttaatatcgt gacgatcaca aaattcttgt aattcttgtt
     4561 ggttaaaata tggatgtacc tcaatttgat tcaccattgg tttgatactt gattgagcca
     4621 ttaatttttc tagatgatga acattaaaat tacatacacc tattgctttt accttacctt
     4681 gctcgtaaag ttcttccata gctttatatg tttctaaaaa tagaccatct gcttcacaag
     4741 gccaatgtat tagaaataaa tcaagataat cagtttgtaa attttcaatc gatttgttga
     4801 aatattcgaa tgttttctca taaccttgat agtcattcca taacttcgtt gttataaaca
     4861 aatcttctct atcgacgcca ttatccttta atgctcgtcc tagtgaagcc tcattatcat
     4921 aaaagtatgc tgtatcaaac gctctatagc ctgcgtcaat tgcagcattt acaactttag
     4981 tcatatcttc gtcagagatt ttataaacac ctaacccaac tgaaggcatc gggtatccat
     5041 tatttaatat ttgtatctca ttcaacatct ttatatctct ccaatctatg tatcttttat
     5101 atctttacat taccctaaat ttttcaacaa actcaattaa tacgaattat cgctttcaat
     5161 aaaaattatt cattaaatca ttaaagatat tgagttccaa tactattttc acttttcatt
     5221 aattttagtc aaaaaaataa ccaaccaaaa atgaattaaa tcattcttag ttggtttata
     5281 tattaatatc tattctgatt tttcatcttc atcagactgt ccgatagtag gtctcgcttc
     5341 attaaattca tagtttaata tcacccaaat aatttggtgg ttatcgattt ctgaaacaac
     5401 ccagcgatca taagttgtat ccacgtaatc atctttttgt aaattggtat tacgagattg
     5461 taaccatcca cctatcgtat caatatcctc agagtcatca aattctatac cgaactcttc
     5521 agttaaatca tccaatagta ctctgccatt tacttggaat gtcttattat caattttaac
     5581 gatatcattc acttcatcat catcaaattc atcacgaatt tctccaacga tttcttctaa
     5641 aatatcttcc atcgttaaaa tacctgccgt tccaccatat tcatctataa taagactcat
     5701 atgtacatgt tcacgttgca ttctaattaa tgcatcactg atacgtgttg tctctgaaat
     5761 cattggcaac tcatgtatat agtttgctat tttaatcgtt tttccagaag cgtattcagt
     5821 taaaaattct ttgacgttaa taaatccttt aatgtggtct ttatcaccat catcagtaat
     5881 tggataacgc gtaaattgat gttcttttat tgtttctagt aattcgtcta cattaaaagg
     5941 ttcatttagt gtaatcattt gagttctagg taccattata tcttttgcat gtctttcatc
     6001 gaatgaaaag atattttgca tatatgccaa ttcagtttgg ttgatttctc caccattata
     6061 actattgtta ataataattt tgatttcttc ttctgacatt gcatcagttt gggcatcagg
     6121 atttacacca aacattctaa taataacacg tgcagaacca ttcatcagcc aaatcaatgg
     6181 tttcataatg ttaccgaaat agaacaatgg tcttgcatat actaaagcaa gcttttcagt
     6241 atgttgaata gctatagatt taggcgctaa ttcaccaagt actacatgca aatacgtaac
     6301 gattataaat gacactgcaa acgaaatcgt cgtcgttaat gcagttggta aattgattgc
     6361 ttcaaatatt gggtgtaata gcttttcaaa cgttggttca ccaagccaac ctaaccctaa
     6421 agatgttact gttataccta actgacaagc agaaagataa taatctagat tagcaatcat
     6481 cttttttact attttagcag gtttatttcc ttcatctgct agctgttcaa ttcttgttgc
     6541 tctaattttt actaatgcaa attctgaacc aacaaataca gtggttaatg caattaatag
     6601 aataaatata atcaaactaa ttatggtcga agtttccaat taattcccta tttctaggga
     6661 ttcacctcca tgttatatgt gtcactcatg ggtaacacgc attcaaattt atcactatga
     6721 cttaaattac aactacatgt tatcgccttc ccatttagac acccccagaa aaaaatgtta
     6781 ttgcgtctat tttatcataa tataaagtgc ttatgttaac agattaaatc tattgcatac
     6841 atttaattct gattatttat tagctaaatg tgtgaacctt gccttgtttt attgtagatt
     6901 ttacattcat atcatcatct agaataacaa gatctgcatc cttatttact ttaatactac
     6961 cttttctatc atcgatacct aatgcaatgg cttgatttaa acttgttact cgccataaat
     7021 gatctaatgt atcacctgta aatgatatta agttacgtaa cccatgattc atttttaaaa
     7081 tactaccagc aagcgcacca tttgcaagac gtgcttgttg cgattgaaca gttacttttt
     7141 gtccacccaa atcatattct ccttcaggca taccttttgc acgcattgca tcggtaatta
     7201 aataaaaacg ttcattacct ttcatacggt aagcaattgc aaccgatgcc ggatgagaat
     7261 gagtgccatc aacaatcatt tcggtatgta gagcatcatt caaccatgct gctccaaaaa
     7321 cacctggttc tctatgttgg aatggcgtcg ctgcattata taaatgcgtg acatgtttag
     7381 ctcctcgctc aacagcttca actgcttctt cgtatgttgc tactgtatga ccaattgaaa
     7441 aaataatgtc atctttatac gtttcaagcg cttcttttgc accttcaact tcaggtgcaa
     7501 acgtcataat ctttattaat ccgttagcag tctcttgaaa atgtttaatt ttatcgataa
     7561 atgggcgtac aacgtattgc ggatgttgag caccaacttt attttcagat ataaatggtc
     7621 cttctaaatg tatacctaca atttccgctg cattgtgaac atcttgctcc gcttcatatt
     7681 tagcaatatt tgtaagtgca ttatctattt tatcagtcga ttgcgtcatt gtagtggcca
     7741 agtatgatgt cgtcccttca gacaacaaat tttcggatag atattttaag ccatcgtatg
     7801 acccatccat tgcatcttga ccataaccac catgaatatg tatatcaata aaacctggta
     7861 atacatgatg acctttagca tcaatcactt gaattttatt tgtcgtatca ttatcaattg
     7921 ctgctttatc atccacttct ccaattgcaa caatctgtcc atctttcaca tgaatgtaac
     7981 cattatcgat tttgccatct tcagtataaa ctttgccgtt atatataatt aattctgaca
     8041 cgtataaacc cttctttatt tataaatttt cactttaaga cactcatatt ttactatatc
     8101 tgcttcgttt ggcataactt tttgcaaaat attaaaaaag tctatacatt tgtggtgtct
     8161 atttcttcat tcatttatct aaaaataaaa acactttcat atcaattcat aaaaactgaa
     8221 ttaatagaaa gtgtttttac agctttgtat aagctaccgt taacacgata tataaaacta
     8281 acatatattc attgaacata caacttaata tgaagctctt tgctaacaat cattttacat
     8341 cattaaaact actcgtccat tgattttgaa gcttcgattt ctgtttcagt taactttggt
     8401 ttgattaaac cgtaaattaa tgctgaaact aatgtgccaa ctagaagtgc aataagagtt
     8461 tgaagtaagt gtgcaccatc agtaccaaca attacaataa taccaccatg tggcgcagta
     8521 attcgtgaac ctaagcctaa agcaattgcg ccacctatac ctgaaccaat catcattgaa
     8581 ggaataacac gtaatggatc ggcagctgca aatggaatcg caccttctgt aataaatgac
     8641 atacccatca catagttagg gataattgaa ccacgttgtt cttttgtaaa tttacgtcta
     8701 aaaattaaca tcgctgtcgc aattgctaac ggtggaatca taccaccaat cattgcagct
     8761 gtaattggtg ctgcattacc ttcaatcaac gcacctgttg caaaaacata tgccgctttg
     8821 ttgaatggac cgcccatatc aatcgccatc atagcgccaa taactaaacc taataataca
     8881 atattagaac ctgataaatt gtttaatcca tctaataaca aatgatttaa ccaagatgct
     8941 ggtggattaa aggcataaat catcaataag cctgtagccg tcactgttaa tagtggataa
     9001 attaatgttg gctttaatcc ctctaatgct tgtggtaact tacgtgtcat ggctttaaca
     9061 ccttgtgtta agtaacctgc taagaaacct gcaataatac caccaataaa tcctgaacca
     9121 cctgaaattg ctaacatacc acctacaaga cctgaagcga aaccaggttt atccgcaata
     9181 ctacgtgcaa tgaatccaga taaaattgga atgattaacg cgaatgcact tttactacca
     9241 atgttccaaa gctgctctgc aaacgcattg tactctgagc tttttggatt aaatgaattt
     9301 gctccaaata aaaatacaat tgccattaaa ataccaccag atattacaag tggcaacatg
     9361 ttagaaacac cgttcattaa gtgtttatag aatgctttac ctgggcttaa tttttcttga
     9421 ctgtcatttg agttaccttt tctttgacca tcacgggcaa caaaaggttt acgacttgta
     9481 tctaatgctt tattaattaa ttcttctggg cgtttaatac catctgctac tggtacttct
     9541 acgacatttt taccatcgaa gcgatccgtc tcaacatgaa catcagcagc aacaatgata
     9601 cctgttgcat tttcaatatc ttgttcagtt aaatggtttt taatgccgct tgaaccattc
     9661 gtttctactt taattttaat acccatttta tccgcttgct ttttcaatgc atcacgtgcc
     9721 atatatgtgt gtgcaatacc tgttggacaa gcagttactg ctaacacata tggctcatta
     9781 gattgtttag atgattgttc tgcagttgca acttgttgtg cttcagcttc tgcctcttct
     9841 tcttttgtca cttcatcatc agcctcatct atgatcgcta gtacttcttc aggtgatgaa
     9901 gcatgtaata atttctcacg tacattttca tccattaaaa taccagacaa cttagctaaa
     9961 gcatctagat gtgtttgggc gccaccttct ggcgctgcaa tcataaagaa taagtgtgct
    10021 ggttgcatat ccaaactttg ataatctacg cctgctttag atttaccaaa cgcaatagct
    10081 ggtgacttaa ctgcggccac tttggcatgt ggaatggcaa taccttcgcc gataccagtt
    10141 gtactttgtg attctcgatt gtgaatcgct tccttaaatg acgcgacatc acttaattta
    10201 cctgctttgt ctaattgatt tactaactca tcaataacac catttttgtc atttgccatt
    10261 aaatccattg ctattgtatc ttttgttaat aactctgtta ctctcattat tttcactccc
    10321 catcaagtac gctaatcgta acttgtgatt ttattttttc tatagcgtcc cgtgttgcta
    10381 agtcctcatc aaatgccgtg gcagtaccgc atgcgactgc ttgttggaat gctttttcaa
    10441 tcgttaaacc tgaagcaatt ccagccacca tgcctgcaac tgtactatca ccagagccaa
    10501 ctgtattaac cactttccct tgtggattaa ctgctttaat actgatttct ttatcaatat
    10561 aaatagcacc atcaccgcca agcgagacaa taacagattg cgcaccttta tcaactaaca
    10621 aacgaccata tttaataaca tctgtgtctg agttcactgt tgtattaaac atcacttcta
    10681 attcatcttt attaggttta ataaatagtg gatgatatgg taaaacgctt tcagccaatt
    10741 ctttttcagc gtcgactact aatttagcac ctgtctgtgc tgtaatttgt gcaatttgcg
    10801 catacgcatc gcttggaata ctacttggta cacttccagc aacaataact atatcttcgc
    10861 ttgttgtatt tttaatttgt tgtaacagtt gttcaaattg tgttgacgtt atatgaggac
    10921 ccggtgcatt gatttctgtt tcttgtcctg tttttaattt cacattaata cgtgtatctt
    10981 catcaacttc aataaaattc gattgaattg cactgttatt taatgtatct ataatgaatt
    11041 tcccaggaaa tccacctgca aatcccaagg cagttgactc aacatccaat gtctttaaga
    11101 cgcgcgagac attaatacct ttccccccag cgaatttata tgttgctgtt gctctgttca
    11161 aaccatcaat tttaaaatca ttcgtaaaaa tgacatagtc aattgaagga ttgaaagtca
    11221 ctgtataaat cataaagtcc ctcctataaa gtgatacttt tgttggtatt cttttaacga
    11281 ttcttgattt aatgcttttt cagatgtgat gattgtcgta ctttctagca aaggtacacg
    11341 agcaaaatat actttattaa acttagaatg atctataagt acaaatgatt gattggctaa
    11401 tgacattgct gtttgtttaa ctaatgcctc ttgctcatcg ggagtagtta atccaagttc
    11461 aatatctaat ccattcatcc cgataaaagc tttatcgaaa caatatcgtc ttaatatctc
    11521 catagcacta gaaccaatcg tagcaagtgt attttcttta acttgaccac ctagcataat
    11581 tgttttaata ccttttttaa gtaaagcttc tacatgtgtt aaaccattgg ttaccacaat
    11641 gatatctttc gcttgaatat atttaattag ctccaatgta gatgaaccag catcgataaa
    11701 taagcattca ttatcgttga tttgattagc tgctatttta gcaatcattt tcttttcatc
    11761 aagattcgtt gctaattttt cagttaaatt cgcctcaacc atacgatttt cttttaacat
    11821 tgcaccacca tgcacacgtt gcaatttccc taattgttgt agtttagata aatctcttcg
    11881 tattgttgaa gcactgcaac cagttcgatc tattaattct tgtaaagtca aaaaatcttt
    11941 gtgcgaaagt tcttctaata ttaactcgtg tcttttttca gtaattatca tcatcacccc
    12001 atctcacttt gtattataat gagtacgctt tcacttttca atcataaatt accaaaaaca
    12061 atcacaaaca ctcaaattgt gacgataaaa ttacattttt atgttcaaat actcaattat
    12121 aatgactgtt tatgatcgta aaatgctaat tcaatcaaaa aggagtgtgg cagaaatgaa
    12181 ttttataaaa atttcatctc tgtcacactc ctaatcttgc cccatacttt ttgttgttat
    12241 taatcattca tggataactg ctccaatttt gcctttagtt attgtaatca aatcctcaac
    12301 agctattgtg atttgcattg ttcgaagccc accactcaca ctgatatgac tataattttc
    12361 acacgatttg tcaacgactg ttggaaacaa tgttttcata ccaacaggcg aacacccacc
    12421 acgaatgtat cccgttacat ttttcaaatt atctaaaggc ataagctgca atttcttctc
    12481 tccaaccaaa gcagctgcct ttttcatatc taaagtttca cttactggga taacaaatac
    12541 aaaatgttca tgttttgtat tttctagaac aagcgtttta aatactgttt taacatttgc
    12601 ttgtatgagt tctgcgactt cttgaccaga taaatgttct tctggtacct caaagctatg
    12661 aacttcgtat ttaatttttg cacgatcaag catacgcatc gcgttcgttt tcttattttt
    12721 agccatttca acacctcatt tatacttctt cagaactata ttaacatttt aaaatacatt
    12781 acggattggt tgattttgac ataacattta catcatttta taagttgaat tcaccttttt
    12841 aaattaaatt attgcaaaat aaaaacagta tatccaatta gaatacactg ttccatctat
    12901 tatttcgtta ttatgccttg atttgaaata cttacatgtt gcttactagt tgaattatca
    12961 ttggaataca cataattata tccatgattt gtcttagaaa ttctttctaa accataatta
    13021 tcattgatat gcttatctgc ataacgatca gcaataactt ggcactcttg ttcgttaaaa
    13081 gaatttgatt tatttgcatt cacacgatgt ttaaaatgat tttgcttttt cacattttca
    13141 ttcacttcag atgctttagc agtatgaata ttgagaatat ccattttctt tttataagta
    13201 tcttcagttg atacatttat cgcgttaagc gtattaattg ttttatgtac cttagcaagc
    13261 gcatcttcat ttgttgctaa tattaataaa ccaattaaac aaacggttaa tattacagca
    13321 acaaagccta aaaataaatt ttttactgtc atccccttac ccacatttcc ttactcattt
    13381 tttatcatct taacacatta acgttaatga attaggtatg tggattgcaa tttaaaaaga
    13441 atgtaatatt tgtaacatgt ttattactca aaatcatttt ttgttacata taacatttaa
    13501 atataaagag taaaacattt agtcaatcga atctttttaa atgtaaagca tcgaattttc
    13561 ttaataaaat tcataagaaa aacgatgcta atcattcata atattacgct ttactttata
    13621 tcaatataca ccaaaatact tatgctacat attttgttct ttcaattttg ctctatgttg
    13681 cttttcaatt aaaacaataa caacacctgc taatgaaaca cctatagcca tataaattgg
    13741 tgcttcaatg tgtacatcaa ataacgcacc tgcgattaaa ggacctatga aattacccat
    13801 actagtgaat gtcgagttca atccgcctgc aaagccttgc ctttctccag caatattaga
    13861 aaaataattt gtaatggctg gtcgtatcat atcaaaacct atgaagacaa caaaactgat
    13921 taacattatt gaccaatagt cattagcaaa aactaataat attaagacaa caactgaata
    13981 taataatgac caagctataa atgttaactc tgagaaatac ttcataaatt tatcgaagaa
    14041 atagatttgg aaaagtgccc caaatatacc gccacccgta atagcaatcg aaatatcttt
    14101 aggtgaataa tttaccttgt cagctgtgta tagtgaatac aatgtttcaa atgcagataa
    14161 accaaacgat aatacaagtg ttaaaataac tggtgtaata aacactttcc agttaatttt
    14221 cgttagcaat tgtggctcta acttttggaa accacttgtc gtagactttt tcggatcgtg
    14281 aatcaataca attgacatta taaatgctag aatacctaat gctcctgcaa agtaaaatgg
    14341 catacgatgt gaaacttctg ccataaatcc accaatccct ggtcctaaaa tgaatccaga
    14401 attgataatc gctgacatgt agccaaagtt ttttgctttt tgatggcttg gtgaaatgtc
    14461 agctattaaa cctgtcacac caggcattac cataccagca ctcataccac caatcactct
    14521 cgataacatc aataccgaaa aattgtggcc aactgcaaac ataaattctg acactgaaaa
    14581 caaaattaat cctatacata taattaattt cttccctaat ttgtcagcta gcgtaccacc
    14641 aaacggcgat ataatcattt gagataacgc aaaagcagca actagtaatc ctaaatcact
    14701 accagttaat cccaaatctt ttaaataaac aggcaagact ggtattacta aaccgatacc
    14761 taaaaaaatc aagaaaatat taaaatataa gacaaaaatc tgtttattca tatgctcacc
    14821 tcttttttct ccatgtcatg cttaaagctg ttattcttct tttccacgac agattgcaat
    14881 tcatgctaaa tattcgtaaa aagtttctat attgtattac aacattgcta catttgacaa
    14941 tattttttct ttgtaattat cactattttc catttaattg tataattaat gacatattaa
    15001 aataaagggg attgatcata tgaaattgca aaaaagtaat catactatac tactagtgtt
    15061 ggaaaaagga gaagatatcg ttgaatgtat aacaaccttt gcagatgacc aagacttaac
    15121 atttacatct gtcagcggca ttggtgcatg tgatgacgtt gtattaaaat ttttcaattt
    15181 aacaacgaaa caatacgaag aaaaacatat tactgagcca ctggaattga cgagcttatt
    15241 aggtaatatt tctcgtctag acaatggtca ttttgcacat ttgcatgcta ctttcggtac
    15301 tcaatcatat gaaactttta gcggacatct cgctaaagca attgtttctg caactgctga
    15361 aatcattctt actctaactg atttggacat tcaacgttca ttcaaagatg cagtcggttt
    15421 aaatttactt gatcctcaat agcactttac tttttagttg aatcaaattt tattacaagt
    15481 tatcataagt gcttaatcat aaatgcattc tcgtttatta atatacttca acgagttaaa
    15541 ttaaattttt aattaggaat tgaatgcgtt tataactatc acatttgaat gaataacttt
    15601 ttcattagaa agtagtgttt attattgatg caatctcgat acatcgctag aatttacttt
    15661 ttaattttat ttatcgtctc cctttttgag actaaaattt ttcaatttat gactttaaat
    15721 ttgtttttag catatatacc ttttgagctt agtctattat tacgattatt caaaccgaat
    15781 aaaaagtatg aatggccact ctttatcata tatagtttta tatttgtgtt acttttacca
    15841 aatacatttt atatggtaac tgatttaatc catttgaacc aatttcaatt caacttttac
    15901 gcaggactaa atttaagtga gtggaaatac tttacctatt tactgcttgg tgtcttctta
    15961 gcggtttatg tgatgatttt aatctatttt gaaatactaa cattgacttc tcaccgttgg
    16021 cttaatagat taattgttgt cgtgctaatg tttttaaatg gattcggaat ttatattggt
    16081 cgtttcttac gcttacattc cgtttatttc tttaatgagc ccttacatgt tctaaatcac
    16141 attctagaaa gtctaacgct taaaactgct atgtttgtat gttttatggt tgtcatgcaa
    16201 gcagcaattc tattatttgg aaaaggagtg cgtttgaaca agtgacaata aatataatcg
    16261 ttttaatagt atctatcatt gtctttcaat tgattattgg acacatatgg catgatattg
    16321 gtttaagtta tttaagaagt atcttactca tgatgctgcc atttggacta ggtgtattta
    16381 tacaacaagt gtcgtattac gaacgacaat atcctaaatg gcaagtgcct caaaacataa
    16441 aagttagatt gaaatatatt tatctcgcta cgtttttaga gtatgtcgta ctatacctca
    16501 ctttatttac ggacatacta agataacatc aaattaataa gaaaactaaa tacaacttat
    16561 atatttgagg aaagccaatt tctatcacat caataataga aattggctta tttatattgc
    16621 ttaagaactt tatattctgc tccagatttt actcatgcca gatctatcaa ttgagccgaa
    16681 ttagtctagc gctttaaatg tagctaaaac ttgtgtacgt ttttcttgat gatctaccat
    16741 ttgtcttgga taatgactac ctaattcaat cccctgttca aaaaggttgg actcattgcg
    16801 ttgtgtatca tgcaaatatt ttgcatcaat ttgattaaaa atcggaagat atgttttgat
    16861 atacaaagct ttagcatcaa agcgttcact ctgtcttatt ggattaaaca ttctaaaata
    16921 cggcactgca tccgtacctg tagaagcaga ccattgccat ccatgaatat ttgatgctgc
    16981 atcatagtca ataaggtgct ttctaaagaa tttttctccc catgtccaat ctataaataa
    17041 atctttggtt aaaaattgcg acacaaccat tctcattcga ttatgcataa aaccagtttg
    17101 tgtcaattcc attattgctg catcaatgat tggaaatcct gtttgccctt cgcaccatgc
    17161 attaaaatcc gcttcatttt gcgaccattt tatctgtcga tatttaggtt tgaaagcttg
    17221 gtatgaggtt tcaggatact gtgtcattaa cacataataa aattctctaa aaatgagttc
    17281 acgtataaat gcttcatagt ttgcctcatc ttcatcataa cgcgccaata aatcattaaa
    17341 aatttcaata atatctaata atccatatgc taaagcaaca cttagctgac ttgttaatac
    17401 ttcaggtaaa tagtctcttc cgctttcgta attctgtata tcttgatcta aaaaatgttg
    17461 ccatttattc tgttcaatta tttgtgagga tccaaatgct atgtcatcaa acactaaatc
    17521 atcaggtgat gcaatgacaa agtcttcgaa tgattttaaa tcatagtgat atacgtctct
    17581 atgcctcaag taaggtcgcc attttttata gaaactagta aaaacattgt atggctcccc
    17641 ttgttgattc attgttttac tcgctttaaa gtaatgattc ccacgtatca aagtaacggc
    17701 aatgcgtgct tcattgaata aagaacgttg atgtaaaata tcatattctt caagatgata
    17761 actcataata tcacccgcag tcactacttc agagatattg ttttctttac aaaatgaaat
    17821 gatatcgtca taagacataa cataaggtgt aagcttttct gcgtgcaacg attggtaaaa
    17881 gcgctgcaaa gtaccgcgat aaaactgtgc tttcaaatca gaagctgaag acatgtcctc
    17941 ttccggaatg ataaaataac atgcatcaat gtcttctttt tgttgataaa tatattcaaa
    18001 taatggattg tgttccattc gaaacattcg atttaataac acagcaattg ccataaacaa
    18061 aacacccttc aattatcttt ttattttatt aagctttttg tcactttaaa ataacctaga
    18121 ttcttattta tatttttaat taaagcaaac ctaaccattt ccaataagtc atgctaaaaa
    18181 ctatcactag aatataccct acaattgtca atggtatacc tgccttcaag aaatctttaa
    18241 ccgtaaaagt accagtgcca taagccaaca tattttgagg tgcactaaca ggtaataaga
    18301 aaccaaaact aataacaaat tgttgaatta aaacaaatcc tatagactgg tctcctaagt
    18361 gtaacgtaga ggttagcgaa ataaaaacag gtattaacgc tgatgataaa cttgttgcac
    18421 tcgcaaagcc caaatgaatc aatatattaa aaagcgtgat aagtgcaatt gtcgcgataa
    18481 taggtaaatg ttttaaacct aaaacaccaa aagtttgatc acttaaccat tgagctgcac
    18541 ctgttttcaa aagaacgtta cctagtgaaa tacctacacc aaacacgata attgttcccc
    18601 atggtatttt attttcaaca tgtttccatg tcatgacacc aattttcggc attaacataa
    18661 cacctaaagc aataatagta atggatgcag agtcaatcgg atgtaatact ttttcagttg
    18721 accaaaacag taataataac atcgatataa caattaaacg ccattcacgt gggctaacgg
    18781 ggccaagttt atgcaattct tcttttatta aatctttacc accttctatt gtattaattt
    18841 ctggaggcat cactttaatc atgatgaaat ataaagctac ggacataact atggaccaag
    18901 gcgctgcata taagaaccac tcgccccatg aaacatcaaa tcctaattga tggtttataa
    18961 aattaatcgc tacgatattt tgtgctgccg ccgttttgat accaatattc caaattgaca
    19021 cagcttgtac tgaagtaatt attaataaag acgctaactt gctatctttg gaaactttaa
    19081 atgccgcaat catacccagc aagattggta caactgcccc tgctctagct gttgcagaag
    19141 gaacgaaaaa tgcaagtaca attgaaacga taattgctcc aataactata tttctagttt
    19201 tattaccaac aattgataac actaaaagag ctagtctttt atgcaaattc gtttcttgca
    19261 tagcagcagc caaaaataat gcagctgcaa cgagagctac agctgaagtt gcaaatccac
    19321 taaacgctaa tgataatgca tgattagttc ctagaaggtc acttccagct aaaatagcac
    19381 tgccactttt cggattacct agcttctccc ctaaattttg aacagggcta aatcctaaaa
    19441 gtaatatcat taagccaata attaaagttg ctgacaccgg atatgataca gcttccgtta
    19501 cccacataat aactgcaaaa gctaaaatag ctagtactgc cttagccatt atcggcagac
    19561 ttgaaggtgc cgggagtaat agtacaacta taagtattat aaaactcatg acaatccaaa
    19621 atggcttgta ttgctttttt gtcttttctt tcttttgttg ttcatgttca actacatgtt
    19681 tttcttctga cataacagtc acccctttgt ttaatcttaa tttaattata acaatttttt
    19741 aaaacataca tttttaattt atgcaaaata cacaatttta tcgaaatatt ttgtaaataa
    19801 tattgctagg tgatgagtta tcttggttaa ttacaaaacg atatctaagt ttaaatatta
    19861 gatcataaaa aaactatcta ctgaatatcc tcatagcatc atttttctaa gcaaaagtta
    19921 aacttagtta gataaaatgc aaatgagatt attgtagata gtctcttttt aatgtttaaa
    19981 aatgattaat gccataaaca taaataattc caaagaatgc cgcgccacta agcactgtta
    20041 atataagact tagtaacaat gtgcgtttat aatgtttaac aaatgctatg aacaaaatga
    20101 ctacattata cgcaaagaaa agtccgaata atgtcattgt tattttcaaa tcagaataga
    20161 aaatatttaa tagtaataca atgactgcat aaattaaata cggaataact ataaatttgc
    20221 gttcaaatct taattgttcg aaacgtttat cttcgtttgt catgatatgc tcctttatga
    20281 tttaaaagta aataagttta cggaatatct tgtccgataa tagcggtgta aatgtcaaac
    20341 cacgactgat catctaaatt aagttgtagc ccttcgattg cttgatcaat acgctttaac
    20401 tgacttgttc caagtatcgg catgatacga tgcggtattt ttactaacca cgctatcatc
    20461 acagctgtgt cactcacacc atatttgtca gctattgatt gaacaacttt cataatacgt
    20521 tgcgctttaa tatcttcctt gtcgaaaatt ttaccgcctg caaaaggact ccaagccatg
    20581 atttgaacat ggttttgata cattgaatcc attgttccat cttgtaaact atcaacgtga
    20641 tatggcgata attctaattg attgatgcta atatgtagtc tttctttcat aatatattga
    20701 tttaacaatt ggtattgtga atgattaaaa ttcgacaccc cgaatgactt caacttacct
    20761 tgtttaacaa gtttagttaa tgcatcagca acttgttctg gatccatcaa tggtgaagga
    20821 cgatgaatga gtagactatc taaataatct acattcaaat tgattaatga ctgttcaaca
    20881 gatttcacga tgtgcttact actcaaatca taacgatgtc catttgtaaa atcaaattgc
    20941 ttagaaggca aaatgatacc acatttcgta acaatttgaa ttttatttct taattcgggt
    21001 gataaatcca aagcattacc aaacagtgat tcacattgat aatctcgata aatatcagca
    21061 tgatccatcg ttgtaattcc acgttcaact aattcattta taaaataatt taactctttc
    21121 gcagtcatct tccattcatt tgcacgccaa aaaccttgta caagcctaga aaaatgaaca
    21181 tagtgattaa tcattatttg ttccatatct catccactcc atccctcaat gtcacaaaat
    21241 attcacaata aaagtattaa gaaattaatg tgctatttcc gttaaattga aacaacacat
    21301 tttctgattt acgtaaattg tagcatatcc aattgattac gtatgtgatt tgtatctaaa
    21361 gtttcaccaa taataacaat cgttaatggt aattgcatgc caattattcc atagtctggt
    21421 aaaccatatg catattgaaa ttcataaatt gcatttggtt gatctctaaa tgacacataa
    21481 cctttcaaac gtagaacaga ttccggtaat ttcattataa attgataaaa caaatgacga
    21541 tcaatcggac ctgtaaacgt gtaagtcata cttttaatcc catgatgatg gtgatgatga
    21601 gacgatatct ctctgtcttt aacagttaag tccaattctt ccaacgaaac ttttccatag
    21661 gttgttttat aagttggaat acttgcacaa atcataccta attgcttatc aattttctca
    21721 agactgtcat cagttataag atcaatttta ttaataataa tcatgtcact tagtttcaac
    21781 tgatcttcca tcagcgaaac tgtattttcg gtatattgat gacgttctaa aaatcgagtc
    21841 gcatctaata caccataaat aatcggcttt tcaaagaaat taacgatttg cggatcttga
    21901 catgcaacta gtaattccaa aggatgcgca atgcctgtcg cttctatgat gacatgatta
    21961 acgtcccctt ttaaagcaat ggcttttagt tcatagacaa gttcttgttt aagatcgcaa
    22021 caaacacaac cattaatcaa tgaatggact tcaatttcat ttgaaatact attgctatca
    22081 atatcaaaag taccgaattc attcatgatg attttaattt tctcatcatt ttttaataat
    22141 tcactaatat aatgtgtcag taacgtggtt ttaccactac ccaaaaatcc gttaattatg
    22201 gatattctta ttttttcatc tttattattt ttcattttat at
//
LOCUS       DALPQQ010000030        22115 bp    DNA     linear   BCT 22-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus strain K18-6-464
            SAMD00233528-rid16434743.denovo.030, whole genome shotgun sequence.
ACCESSION   DALPQQ010000030 DALPQQ010000000
VERSION     DALPQQ010000030.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMD00233528
            Sequence Read Archive: DRR236061
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 22115)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 22115)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001543423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001543423.1
            Genome Coverage       :: 77x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/22/2022 17:09:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,811
            CDSs (total)                      :: 2,743
            Genes (coding)                    :: 2,689
            CDSs (with protein)               :: 2,689
            Genes (RNA)                       :: 68
            rRNAs                             :: 2, 4, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 4, 2 (16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 54
            CDSs (without protein)            :: 54
            Pseudo Genes (ambiguous residues) :: 0 of 54
            Pseudo Genes (frameshifted)       :: 27 of 54
            Pseudo Genes (incomplete)         :: 27 of 54
            Pseudo Genes (internal stop)      :: 10 of 54
            Pseudo Genes (multiple problems)  :: 10 of 54
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..22115
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMD00233528-rid16434743.denovo.030"
                     /strain="K18-6-464"
                     /db_xref="taxon:1280"
                     /geo_loc_name="Japan: Niigata"
     gene            complement(170..913)
                     /locus_tag="O7798_001011"
     CDS             complement(170..913)
                     /locus_tag="O7798_001011"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500336.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycerophosphodiester phosphodiesterase"
                     /protein_id="HDC2863278.1"
                     /translation="MTLNKLKDELQIVSHRGLPSDFPENTMVGYREVMGLNVAMLEID
                     VHLTKDQHFVVIHDETIDRTSDGKGRIADYTLSQLKSFDFGSYKDVAFKGERIPTLDE
                     VLSLCLKYDKKLLIELKSPNLYPEIECKLLAFLEEKKVDATQVVIQSFDIECIEKLNT
                     LGSIYELGVLCSKRNYWYKKPNFSRIAQIASYVNPNYALVTRKFVDKAHHHQLQVMPY
                     TVNKLKTGEKLRQMGVDGLITDNPKLFIK"
     gene            993..1439
                     /locus_tag="O7798_001012"
     CDS             993..1439
                     /locus_tag="O7798_001012"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500337.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="OsmC family protein"
                     /protein_id="HDC2863279.1"
                     /translation="MHQHDFKVQTSWQGGRNNVGNVQGDILSENISIPASLGGVGIGT
                     NPDEMLVSAASSCYIISLAATLERAKFTDISIEQQSIGTACLNNGKFSMSKIVHHPQI
                     QIPSDQIAQLEKRLPKLITIADNNCMISNAVRNNVDIKIYPIIQAK"
     gene            1553..2713
                     /locus_tag="O7798_001013"
     CDS             1553..2713
                     /locus_tag="O7798_001013"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500338.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alanine--glyoxylate aminotransferase family
                     protein"
                     /protein_id="HDC2863280.1"
                     /translation="MYYHQPLLLTPGPTPVPDAIRREIQAPMVGHRSKDFEDIAQQAF
                     QGLKPIFGSQNDVLILTSSGTSVLEASMLNIVNPEDHFVVIVSGAFGNRFKQIAQTYY
                     KNVHIYDVTWGEAVDVKDFINFLSTLNVEVKAVFSQYCETSTTVLHPIHELGNAINQF
                     NSNIYFVVDGVSCIGAVDVDINKDKIDVLVSGSQKAIMLPPGLAFVAYSHRAKEHFKE
                     VTTPKFYLDLNKYISSQADNSTPFTPNVSLFRGVNAYVETVKAEGFNHVIARHYAIRN
                     ALRSALKALDLTLLVNDKDASPTVTAFKPNTNDEVKIIKDELKNRFKITIAGGQGHLK
                     GQILRIGHMGKISPFDILSVVSALEIILTEHRKVNYIGKGISKYMEVIHEAI"
     gene            2700..4304
                     /locus_tag="O7798_001014"
     CDS             2700..4304
                     /locus_tag="O7798_001014"
                     /EC_number="1.1.1.95"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500339.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoglycerate dehydrogenase"
                     /protein_id="HDC2863281.1"
                     /translation="MKQFNVLVADPISKDGIKALLDHEQFNVDIQTGLSEEALIKIIP
                     SYHALIVRSQTTVTENIINAADSLKVIARAGVGVDNINIDAATLKGILVINAPDGNTI
                     SATEHTLAMLLSMARNIPQAHQSLTNKEWNRNAFKGTELYHKTLGVIGAGRIGLGVAK
                     RAQSFGMKILAFDPYLTDEKAKSLSITKATVDEIAQHSDFVTLHTPLTPKTKGLINAV
                     FFAKAKPSLQIINVARGGIIDEKALIKALDEGQISRAAIDVFEHEPATDSPLVAHDKI
                     IVTPHLGASTVEAQEKVAISVSNEIIEILIDGTVTHAVNAPKMDLSNIDDTVKSFINL
                     SQTVGELAIQLMYNAPSSIKITYGGDLASIDSSLLTRTIITHILKDDLGPEVNIINAL
                     MLLNQQQVTLNIENNKAETGFSNYLEVELSNDSDSVKVGASVFTGFGPRIVRINNFSV
                     DLKPNQYQIVSYHNDTPGMVGKTGALLGKYNINIASMTLGRTEAGGDALMILSVDQPV
                     SNNIIDELKQVGEYNQIFTTELTVQS"
     gene            4398..4493
                     /locus_tag="O7798_001015"
     CDS             4398..4493
                     /locus_tag="O7798_001015"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500340.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDC2863282.1"
                     /translation="MKPLVQSFTTSYAVKQQSNYKLSSTPLSSPK"
     gene            complement(4454..5584)
                     /locus_tag="O7798_001016"
     CDS             complement(4454..5584)
                     /locus_tag="O7798_001016"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500341.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAD family hydrolase"
                     /protein_id="HDC2863283.1"
                     /translation="MKKILFDVDGVFLSEERCFDVSALTVYELLMDKCYLGLHSHIDW
                     ETLTDNDIQDIRNRIFQKDKILNKLKSLGLNSNWDMLFIVFSIHLIDILKKLSHDEIE
                     AFMYQDEPVELKLQNISTNLADCFNLNEQLPLQFLDNVKVGKNNIYAALEEFATTELH
                     VSDATLFSLKGALWTLAQEVYQEWYLGSKLYEDVEKKIARTTFKTGYIYQEIILRPVD
                     EVKVLLNDLKGAGFELGIATGRPYTETVVPFENLGLLPYFEADFIATASDVLEAENMY
                     PQARPLGKPNPFSYIAALYGNNRDKYESYINKQDNIVNKDDVFIVGDSLADLLSAQKI
                     GATFIGTLTGLKGKDAAGELEAHHADYVINHLGELRGVLDNL"
     gene            complement(5691..7157)
                     /locus_tag="O7798_001017"
     CDS             complement(5691..7157)
                     /locus_tag="O7798_001017"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500342.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS transporter subunit EIIBC"
                     /protein_id="HDC2863284.1"
                     /translation="MYKFFQNLGRSLMLPVAILPAAAIIAGIGNTLNALHATPKIAMF
                     FTTVGTTILEQLGILFAIGVAIGMAKKNDGAVALAATLGYFLVTVVLSPMKLAPLLGM
                     KASEINSAFEKMNNGNVFVGIVIGLIAAYAYNKFSETELPLALSFFSGKRLVPIMTAF
                     YCTFLVVILLFLWPLLYSWIVKFGESIVGLGSFGAFIYGVANRLLIPTGLHHALNSVF
                     WFDTIGINDIGKFQSGKDAIKGITGRYQAGFFPIMMFGIPAAALAMYHTAKTTQKKQV
                     YGWFLASSVAAFFVGVTEPIEFAFMFVAPILYVVHALLTGLSLFIAATFHWTAGFSFS
                     AGLIDYVLSLINPVSNHPLMLLVQGVVFFILYYVIFRVVIQVFNLNTIGRGENELVDP
                     TVVKDNIAPGENDIKQSKYHQHAIQILEGLGGQENIVNLTNCATRLRLELKDTSIIDK
                     QKIKNAGAVGVTVNGKHSTQVIVGTHVQQVADEIEKHL"
     gene            complement(7285..7902)
                     /locus_tag="O7798_001018"
     CDS             complement(7285..7902)
                     /locus_tag="O7798_001018"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500343.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="1-acyl-sn-glycerol-3-phosphate acyltransferase"
                     /protein_id="HDC2863285.1"
                     /translation="MYSVISKILNFILVKMSKSLYVIGKDNIPKDSKYVVTCTHESYN
                     EVIMLGMALYPNQIHYMAKKELFKNKWIGKFLTSLNAFPVDRENPGPSTLKRPINLLK
                     DNKTVGIFPTGSRTSQEGAPLKRGASTIAMLSKSPILPVAYVGPTKIHGLLTGQAYIN
                     IGKPIDINDLPKDLKRNERIDYITKEIETRTAKLQQELHEIVKSL"
     gene            8074..9348
                     /locus_tag="O7798_001019"
     CDS             8074..9348
                     /locus_tag="O7798_001019"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500344.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine protease"
                     /protein_id="HDC2863286.1"
                     /translation="MSDFNHTDHSTTNHSQTPRYRRPKFPWFKTVIVALIAGIIGALL
                     VLGIGKVLNSTILNKDGSTVQTTNNKGGNQLDGQSKKFGTVHEMIKSVSPTIVGVINM
                     QKASSVDDLLKGKSSKPSEAGVGSGVIYQINNNSAYIVTNNHVIDGANEIRVQLHNKK
                     QVKAKLVGKDAVTDIAVLKIENTKGIKAIQFANSSKVQTGDSVFAMGNPLGLQFANSV
                     TSGIISASERTIDAETTGGNTKVSVLQTDAAINPGNSGGALVDINGNLVGINSMKIAA
                     TQVEGIGFAIPSNEVKVTIEQLVKHGKIDRPSIGIGLINLKDIPEEEREQLHTDREDG
                     IYVVKADSDIDLKKGDIITEIDGKKIKDDVDLRSYLYENKKPGESVTVTVIRDGKTKE
                     VKVKLKQQKEQPKRQSRSERQSPGQGDRDFFR"
     gene            complement(9442..10704)
                     /locus_tag="O7798_001020"
     CDS             complement(9442..10704)
                     /locus_tag="O7798_001020"
                     /EC_number="6.1.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500345.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine--tRNA ligase"
                     /protein_id="HDC2863287.1"
                     /translation="MTNVLIEDLKWRGLIYQQTDEQGIEDLLNKEQVTLYCGADPTAD
                     SLHIGHLLPFLTLRRFQEHGHRPIVLIGGGTGMIGDPSGKSEERVLQTEEQVDKNIEG
                     ISKQMHNIFEFGTDHGAVLVNNRDWLGQISLISFLRDYGKHVGVNYMLGKDSIQSRLE
                     HGISYTEFTYTILQAIDFGHLNRELNCKIQVGGSDQWGNITSGIELMRRMYGQTDAYG
                     LTIPLVTKSDGKKFGKSESGAVWLDAEKTSPYEFYQFWINQSDEDVIKFLKYFTFLGK
                     EEIDRLEQSKNEAPHLREAQKTLAEEVTKFIHGEDALNDAIRISQALFSGDLKSLSAK
                     ELKDGFKDVPQVTLSNDTTNIVEVLIETGISPSKRQAREDVNNGAIYINGERQQDVNY
                     ALAPEDKIDGEFTIIRRGKKKYFMVNYQ"
     gene            11086..11991
                     /locus_tag="O7798_001021"
     CDS             11086..11991
                     /locus_tag="O7798_001021"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500346.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="penicillin-binding protein"
                     /protein_id="HDC2863288.1"
                     /translation="MTNQDNNHQLNHRIYHFEKIYKAIKHVIVFIFMIFIAIVAIAVI
                     AMSLYFHHLTKTSDSLSDDALIKKVRQIPGDELLDHNNKNLLYEYNHSQNSLIIGPKT
                     SSPNVIKALTSSEDTLFYKHDGILPKAILRAMIQDIFNTDQSSGGSTITQQLVKNQVL
                     TNEKTYSRKANELRLAIRLEHLLSKDEIIYTYLNIVPFGRDYNGANISGIASASYSLF
                     GIPPKDLSIAQSAYLIGLLQSPYGYTPYEKDGTLKSDKDLKYSIQRQHYVLKRMLIED
                     QITEKEYNDALKYDIKSHLLNRKKR"
     gene            complement(11971..12063)
                     /locus_tag="O7798_001022"
     CDS             complement(11971..12063)
                     /locus_tag="O7798_001022"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500347.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDC2863289.1"
                     /translation="MKIILLLFLIFGFIVVVTLKSEHQLTLFSI"
     gene            complement(12194..14881)
                     /gene="harA"
                     /locus_tag="O7798_001023"
     CDS             complement(12194..14881)
                     /gene="harA"
                     /locus_tag="O7798_001023"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500348.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="haptoglobin-binding heme uptake protein HarA"
                     /protein_id="HDC2863290.1"
                     /translation="MNKHHPKLRSFYSIRKSTLGVASVIVSTLFLITSQHQAQAAENT
                     NTSDKISENQNNNATTTQPPKDTNQTQPATQPANTAKNYPAADESLKDAIKDPALENK
                     EHDIGPREQVNFQLLDKNNETQYYHFFSIKDPADVYYTKKKAEVELDINTASTWKKFE
                     VYENNQKLPVRLVSYSPVPEDHAYIRFPVSDGTQELKIVSSTQIDDGEETNYDYTKLV
                     FAKPIYNDPSLVKSDTNDAVVTNDQSSSVASNQTNTNTSNQNTSTINNANNQPQATTN
                     MSQPAQPKSSTNADQASSQPAHETNSNGNTNDKTNESSNQSDVNQQYPPADESLQDAI
                     KNPAIIDKEHTADNWRPIDFQMKNDKGERQFYHYASTVEPATVIFTKTGPIIELGLKT
                     ASTWKKFEVYEGDKKLPVELVSYDSDKDYAYIRFPVSNGTREVKIVSSIEYGENIHED
                     YDYTLMVFAQPITNNPDDYVDEETYNLQKLLAPYHKAKTLERQVYELEKLQEKLPEKY
                     KAEYKKKLDQTRVELADQVKSAVTEFENVTPTNDQLTDLQEAHFVVFESEENSESVMD
                     GFVEHPFYTATLNGQKYVVMKTKDDSYWKDLIVEGKRVTTVSKDPKNNSRTLIFPYIP
                     DKAVYNAIVKVVVANIGYEGQYHVRIINQDINTKDDDTSQNNTSEPLNVQTGQEGKVA
                     DTDVAENSSTATNPKDASDKADVIEPESDVVKDADNNIDKDVQHDVDHLSDMSDNNHF
                     DKYDLKEMDTQIAKDTDRNVDKDADNSVGMSSNVDTDKDSNKNKDKVIQLNHIADKNN
                     HTGKAAKLDVVKQNYNNTDKVTDKKTTEHLPSDIHKTVDKTVKTKEKAGTPSKENKLS
                     QSKMLPKTGETTSSQSWWGLYALLGMLALFIPKFRKESK"
     gene            14880..14969
                     /locus_tag="O7798_001024"
     CDS             14880..14969
                     /locus_tag="O7798_001024"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500349.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDC2863291.1"
                     /translation="MLLTTPIRLYLIDNNYQYQLLVLIVAHPN"
     gene            complement(15214..16881)
                     /locus_tag="O7798_001025"
     CDS             complement(15214..16881)
                     /locus_tag="O7798_001025"
                     /EC_number="6.3.4.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500350.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="formate--tetrahydrofolate ligase"
                     /protein_id="HDC2863292.1"
                     /translation="MTHLSDLDIANQSTLQPIKDIAASVGISEDALEPYGHYKAKIDI
                     NKITPRENKGKVVLVTAMSPTPAGEGKSTVTVGLADAFHELNKNVMVALREPALGPTF
                     GIKGGATGGGYAQVLPMEDINLHFNGDFHAITTANNALSAFIDNHIHQGNELGIDQRR
                     IEWKRVLDMNDRALRHVNVGLGGPTNGVPREDGFNITVASEIMAILCLSRSIKDLKDK
                     ISRITIGYTRDRKPVTVADLKVEGALAMILKDAIKPNLVQSIEGAPALVHGGPFANIA
                     HGCNSILATETARDLADIVVTEAGFGSDLGAEKFMDIKAREAGFDPAAVVVVATIRAL
                     KMHGGVAKDNLKEENVEAVKAGIVNLERHVNNIKKFGVEPVVAINAFIHDTDAEVEYV
                     KSWAKENNVRIALTEVWEKGGKGGVDLANEVLEVIDQPNSFKPLYELELPLEQKIEKI
                     VTEIYGGSKVTFSSKAQKQLKQFKENGWDNYPVCMAKTQYSFSDDQTLLGAPSGFEIT
                     IRELEAKTGAGFIVALTGAIMTMPGLPKKPAALNMDVTDDGHAIGLF"
     gene            complement(17321..19027)
                     /gene="acsA"
                     /locus_tag="O7798_001026"
     CDS             complement(17321..19027)
                     /gene="acsA"
                     /locus_tag="O7798_001026"
                     /EC_number="6.2.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500351.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetate--CoA ligase"
                     /protein_id="HDC2863293.1"
                     /translation="MKVEVYKGAQGKHNLKDYEETYNTFDWKDVEQAFSWSETGKMNM
                     AYECIDRHVDQGLGDKIALNYKDEHRKESYTYKDMQRLSNKAANVLSEHAEVDKGDRV
                     FIFMSRTPELYFALLGVLKIGAIVGPLFEAFMEKAVADRLENSEAKVLITNKALLPRV
                     PVDKLPNLKKIVVVDEDVEDNYIDFISLMETASDEFDIEWLKSDDGLILHYTSGSTGQ
                     PKGVLHVQQAMLVHYISGKYVLDLQEDDVYWCTADPGWVTGTSYGIFAPWLNGATNCI
                     AGGRFSPEQWYSMIEDFKVTIWYTAPTALRMLMSAGDDIVEKYDLSSLRSILSVGEPL
                     NPEVIKWAKKVYGLTVLDTWWMTETGGHMIVNYPTMDVKLGSMGKPLPGIQAAIIDDA
                     GNELPPNRMGNLAIKKGWPSMMYRIWKNPEKYKSYFIGDWYVSGDSAYKDEDGYFWFQ
                     GRVDDVIMTAGERVGPFEVESKLVEHEAVAEAGIIGKPDPVRGEIIKAFVALRKGYEP
                     TDELKEEIRIFVKEGLSAHAAPREIEFKDKLPKTRSGKIMRRVLKAWELNLDAGDLST
                     ME"
     gene            19196..19828
                     /locus_tag="O7798_001027"
     CDS             19196..19828
                     /locus_tag="O7798_001027"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500352.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetyltransferase"
                     /protein_id="HDC2863294.1"
                     /translation="MNHLKTYQSEDYYIHDKQFVIEGPLTHEDLKALTFDAHLTAFRD
                     AEDQYKALLEITTLPEGRIYVARQDQLIVGYVTFHYPDEIERWSTGKLPYLIELGAIE
                     VSINFRQLQLAEKLIQLSLSTPEFENYIVITTEYYWHWDLKNSKLDVFDYKKLMQRLM
                     ATGGLEIFATDDPEITSHPANCLMARIGKNITLEQQQAFDDIRYMNRFFF"
     gene            19853..21022
                     /locus_tag="O7798_001028"
     CDS             19853..21022
                     /locus_tag="O7798_001028"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500353.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetoin utilization protein AcuC"
                     /protein_id="HDC2863295.1"
                     /translation="MQQHSSKTAYVYSDKLLQYRFHDQHPFNQMRLKLTTELLLNANL
                     LSPEQIVQPRIATDDELMLIHKYDYVEAIKHASHGIISEDEAKKYGLNDEENGQFKHM
                     HRHSATIVGGALTLADLIMSGKVLNGCHLGGGLHHAQPGRASGFCIYNDIAITAQYLA
                     KEYNQRVLIIDTDAHHGDGTQWSFYADNHVTTYSIHETGKFLFPGSGHYTERGEDIGY
                     GHTVNVPLEPYTEDASFLECFKLTVEPVVKSFKPDIILSVNGVDIHYRDPLTHLNCTL
                     HSLYEIPYFVKYLADSYTNGKVIMFGGGGYNIWRVVPRAWSHVFLSLIDQPIQSGYLP
                     LEWINKWKHYSSELLPKRWEDRLNDYTYVPRTKEISEKNKKLALHIASWYESTRQ"
     gene            complement(21120..22109)
                     /gene="ccpA"
                     /locus_tag="O7798_001029"
     CDS             complement(21120..22109)
                     /gene="ccpA"
                     /locus_tag="O7798_001029"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500354.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="catabolite control protein A"
                     /protein_id="HDC2863296.1"
                     /translation="MTVTIYDVAREARVSMATVSRVVNGNQNVKAETKNKVNEVIKRL
                     NYRPNAVARGLASKKTTTVGVIIPDISNIYYSQLARGLEDIATMYKYHSIISNSDNDP
                     EKEKEIFNNLLSKQVDGIIFLGGTITEEMKELINQSSVPVVVSGTNGKDAHIASVNID
                     FTEAAKEITGELIEKGAKSFALVGGEHSKKAQEDVLEGLTEVLNKNGLQLGDTLNCSG
                     AESYKEGVKAFAKMKGNLPDAILCISDEEAIGIMHSAMDAGIKVPEELQIISFNNTRL
                     VEMVRPQLSSVIQPLYDIGAVGMRLLTKYMNDEKIEEPNVVLPHRIEYRGTTK"
BASE COUNT         7180 a         4036 c         3294 g         7605 t
ORIGIN      
        1 tttaaaaatg atagattcaa aattatatgg agctacccta ttttacaatc aacttagaat
       61 ttacaagtct tatttgttta attatcttta gtatttcatc attagttttt aaaattatca
      121 attgcgatat acgaatcctc atccctctat caaattacca ttcatcgtct cacttaataa
      181 ataatttcgg attatctgta attaatccat ctacacccat ttgtcttaat ttttctccag
      241 ttttcaattt attaactgtg tatggcataa cctgtaattg atgatgatgt gctttatcaa
      301 caaattttct ggtcactaat gcataattag gattaacata actagcaatt tgagcaattc
      361 ttgaaaagtt tggcttttta taccaataat tacgtttact acaaagcaca cctaattcat
      421 atatactgcc caatgtgttt aacttttcga tgcattcgat atcaaaagat tgtataacta
      481 cttgtgtcgc atcgactttc ttttcttcca aaaatgccag caatttacat tctatttctg
      541 gatataaatt cggacttttc aattcaatca atagcttttt atcatacttt aagcataatg
      601 aaagtacttc atctaacgtg ggtattcgtt ctcccttaaa agcaacatct ttataactac
      661 caaaatcaaa tgattttaat tgcgataatg tgtaatcagc aatacgcccc ttaccatccg
      721 atgttctatc aattgtttca tcatgtatca caacaaaatg ttggtctttg gtcaaatgaa
      781 catctatttc taacatagca acattgagcc ccattacctc tcgataaccg accattgtat
      841 tttcaggaaa atcactcggc aatccacggt gcgaaacaat ttgtaattca tctttcagtt
      901 tattcagagt cattgataag tcacctttct gttaaacttt gataaactat tctaaaatta
      961 aactatcaca attatattgg aggttaaagc aattgcatca acatgacttt aaagtccaaa
     1021 cttcttggca aggtggtcgt aacaatgtcg gaaacgttca aggcgacata ctttcagaga
     1081 atatttctat acctgcttct ttaggtggtg ttggtatagg aacaaatccc gatgaaatgt
     1141 tagtatcagc cgcttcatca tgttatatca tctcattagc agctactctt gaacgtgcaa
     1201 agttcacaga tatttcaatt gaacaacaat cgattggaac agcttgttta aataacggaa
     1261 aattcagtat gtcaaaaatt gtgcaccatc ctcaaattca aattccaagt gatcaaatag
     1321 cacaattaga aaagcgatta ccaaaattga taacaattgc agataataat tgcatgattt
     1381 caaatgctgt aagaaataat gtggacataa aaatctatcc catcattcag gccaaataaa
     1441 atcgttaagt gataacgttt gttcgacaat atagcgttat cactttttta ggcttttaaa
     1501 ttttcagaaa atttgctaaa atagtgaaat cttatttata ggaggcatat aaatgtatta
     1561 tcatcaaccg ttgttattaa cacctggccc aacccctgta cctgatgcca ttaggagaga
     1621 aattcaagca cctatggttg gtcatcgttc taaagatttt gaagacatcg cacaacaagc
     1681 atttcaaggt ctaaagccaa tatttgggag tcaaaatgat gtacttattt taacatctag
     1741 cggtacaagc gtcttggagg ctagtatgtt gaacattgta aaccctgaag atcacttcgt
     1801 tgtcattgtt tcaggtgcct ttggtaaccg atttaaacaa attgcacaaa cttattacaa
     1861 aaatgtgcat atttatgacg taacatgggg agaagctgta gatgtcaaag atttcatcaa
     1921 tttcctttca actttaaatg ttgaagttaa agcagtattt agtcaatatt gcgaaacatc
     1981 tacgacagtg ctacacccta ttcacgagtt aggaaatgcc attaatcaat ttaatagtaa
     2041 tatttatttt gtagttgacg gcgtaagttg cattggtgct gttgatgttg acattaacaa
     2101 agataaaatt gatgtacttg tttctggtag tcaaaaagca attatgttac ctccaggatt
     2161 agcttttgta gcttatagcc accgtgcaaa agaacatttc aaagaagtaa ctacgccaaa
     2221 attttatcta gacttaaata aatacatttc gtcacaagct gacaattcta caccgttcac
     2281 accaaatgtg tctttattta gaggtgtaaa tgcatacgtt gaaaccgtaa aagcagaagg
     2341 tttcaatcac gtaatagcac gacactatgc aattagaaat gcattaagaa gcgccttaaa
     2401 agcattagat ttaactttat tagtcaatga taaagatgca tctccaacgg ttacagcatt
     2461 caaacctaat acaaatgatg aagtgaaaat aatcaaagat gaacttaaaa atcgctttaa
     2521 aataacaatt gctggtggtc aaggccatct taaaggtcaa attttaagaa ttggtcatat
     2581 ggggaaaatt agtcctttcg atattttatc ggtagtatct gctttagaaa ttattttaac
     2641 tgaacaccgt aaagttaact atatcggtaa aggtatatca aaatatatgg aggttattca
     2701 tgaagcaatt taatgtactc gttgcagatc ccatatcaaa agatggtatc aaagcattat
     2761 tagatcacga acaattcaat gtagatattc aaactggctt gtccgaagaa gcattaatca
     2821 aaattatacc ttcataccat gctttaatcg ttcgtagtca aactacggtt actgaaaata
     2881 tcataaatgc tgctgattct ttaaaagtaa tcgcacgcgc cggtgttggt gtagataata
     2941 ttaatattga tgctgcaaca ttaaaaggta ttttagttat taatgcccca gatggtaata
     3001 cgatttcagc tactgaacat acactggcaa tgttattatc aatggcacga aatattccgc
     3061 aagcacacca atcacttaca aataaagaat ggaatcgaaa tgcatttaaa ggtactgagc
     3121 tttatcataa aacattaggt gtcattggtg ctggtagaat tggtttaggt gttgctaaac
     3181 gtgcgcaaag tttcggaatg aaaatactag cttttgaccc ttacttaacg gatgaaaaag
     3241 caaaatcttt aagcattacg aaggcaacag ttgatgagat tgcccaacat tctgatttcg
     3301 ttacattaca tacaccacta acacctaaaa caaaaggctt aattaatgct gtcttttttg
     3361 ccaaagcaaa acctagtttg caaataatca atgtggcacg tggtggtatt attgatgaaa
     3421 aggcgctaat aaaagcatta gacgaaggac aaattagtcg ggcagctatc gatgtgtttg
     3481 aacatgaacc tgcaactgac tcgcctcttg ttgcacatga taaaattatt gttacacctc
     3541 atttgggtgc ttcaacagtc gaagctcaag aaaaagtggc aatttctgtt tcaaatgaaa
     3601 tcatcgaaat tttaattgat ggtactgtaa cgcatgcagt gaatgcacct aaaatggact
     3661 taagcaatat agatgatact gtaaaatcat tcatcaattt aagccaaaca gttggtgaat
     3721 tagctattca attaatgtac aatgcaccaa gctctattaa aattacgtac ggtggcgact
     3781 tagcctctat tgatagtagt ttattaacac gtacaattat tactcatatt ttaaaagatg
     3841 atcttggtcc tgaagtcaat attatcaatg ctctaatgtt gttaaatcaa caacaagtga
     3901 cattaaatat tgaaaataat aaagcagaga caggttttag taactactta gaggtagaac
     3961 tatcaaacga tagcgattcc gttaaagttg gcgcttctgt ctttacaggt ttcggtccaa
     4021 gaattgttag aattaataat ttttctgtag acttaaagcc aaatcaatat caaattgtgt
     4081 catatcataa tgatactcca ggtatggtag gaaaaactgg cgcattgtta ggtaaataca
     4141 atatcaacat tgcatctatg actttaggta gaactgaagc gggcggagat gcgctaatga
     4201 ttttatccgt tgatcaacct gtttcaaaca atataattga tgaacttaaa caagttggtg
     4261 aatacaatca aattttcaca actgaattga cggtacagtc ataaacaatt tatgtaaatt
     4321 caaaatgcca agaagacatt ggattacttc cattgcttct tggcattttt tcattattaa
     4381 tttcattgta actcaatatg aaacctttgg ttcaatcatt cactacaagt tatgctgtca
     4441 aacaacaatc aaattacaaa ttatctagta cacctctaag ttcacctaaa tgattaataa
     4501 catagtcggc atgatgcgct tctaactcac ctgcagcatc cttacctttt aaacctgtta
     4561 atgttccaat aaacgttgca cctatttttt gagcacttaa taagtcagct aacgaatcgc
     4621 ctactataaa tacgtcatct ttatttacaa tgttatcttg cttattgata taagattcat
     4681 atttatcgcg attattacca tataaagctg cgatataact aaaaggattc ggctttccta
     4741 atggtcgtgc ttgcggatac atattctctg cttctaaaac atcacttgct gttgcaataa
     4801 aatcagcttc aaaatatggt aacaatccta aattttcaaa tggcacaaca gtctcagtat
     4861 aaggacgacc tgttgcaata cctaattcga aaccagcacc ttttaaatca ttcagaagta
     4921 ccttaacttc atctactggt ctcaaaataa tttcttgata aatataacct gtcttaaaag
     4981 tagttcgtgc tattttcttt tcaacatctt catacaactt cgatcctaaa taccattctt
     5041 gataaacttc ttgcgctaac gtccataatg cacccttcaa actaaataaa gtagcatccg
     5101 aaacatgtaa ctctgttgtt gcaaactctt ccaaagcagc ataaatatta tttttaccaa
     5161 cttttacatt atccaaaaat tgtaaaggta gttgttcatt taaattaaaa cagtctgcta
     5221 agtttgtgct tatattttgc aacttcaatt cgacaggctc atcttgatac atgaatgcct
     5281 caatttcatc atgtgataac tttttcaaaa tatcaattaa atgaatacta aaaacgataa
     5341 ataacatatc ccaatttgaa ttcagcccta gcgattttaa tttgtttaaa atcttatctt
     5401 tttgaaaaat tcgattccta atgtcttgta tatcgttatc agtcaaagtt tcccaatcta
     5461 tatgtgaatg aagacctaaa taacacttat ccattaataa ttcatatacc gttaatgcag
     5521 agacatcgaa acaacgttct tcacttaaaa aaacgccatc aacatcaaat aaaattttct
     5581 tcacaatccc cactccattt ctgaaaattc agatataaat cattctacta tttgactaaa
     5641 aaaagcgcaa accctattga agttagattt gcgctttagc tgtttaaatt ttataaatgt
     5701 ttttcaattt catcagcaac ctgctgtacg tgtgtaccga caataacttg agttgaatgt
     5761 ttgccattaa cagtaacacc aactgcaccg gcgtttttaa tcttctgttt atcaataata
     5821 gatgtgtctt ttaactctag acgcaacctt gttgcacaat tggttaaatt aacaatattc
     5881 tcttgaccgc ctaaaccttc taatatttgt atagcatgtt gatgatattt actttgttta
     5941 atatcatttt caccaggagc aatattatct tttacaactg ttgggtcaac taattcattt
     6001 tcacctctac caatcgtatt caagttaaat acttggatta ctacacggaa aatcacatag
     6061 tataagatga aaaatacaac accttgaaca agcaacatca atggatgatt tgatactgga
     6121 ttaattagtg ataacacata atctatcaaa cctgcactaa atgaaaatcc agctgtccaa
     6181 tggaatgtag ctgcgataaa taaagataat cctgttaata acgcatgaac aacatataag
     6241 attggcgcaa caaacataaa tgcaaactca atcggctctg taacaccaac gaaaaatgct
     6301 gcaactgaac tcgctaggaa ccaaccgtaa acttgttttt tctgagtagt tttagctgta
     6361 tgatacattg ctaacgcagc cgctggaata ccgaacatca tgattgggaa gaatcccgct
     6421 tgatagcgtc ctgtaatacc ttttatagca tctttgccac tttggaattt accaatatca
     6481 ttaataccaa tcgtatcaaa ccagaacaca ctattcagtg catgatgtaa tcctgtagga
     6541 attaataatc tattggcaac accatatatg aaagctccaa acgatcctaa accgactata
     6601 gattcaccaa attttacaat ccatgaataa agtagtggcc ataagaataa caatatgaca
     6661 actaaaaatg tacagtaaaa tgcagtcata attggaacta gacgtttacc actaaaaaat
     6721 gataatgcta atggtaattc tgtttcacta aacttattgt atgcataagc tgctattaaa
     6781 cctattacaa taccaacaaa gacattgcca ttattcatct tttcaaaagc tgaatttatt
     6841 tccgaagctt tcattcctaa taaaggcgct aatttcattg gtgataatac aactgtaact
     6901 aaaaaatatc ctaacgtagc tgcaagcgcg actgcaccat catttttctt tgccattcct
     6961 atagctacac caattgcaaa taaaatacct aattgctcta aaatcgtagt acctaccgta
     7021 gtaaagaaca ttgcgatttt cggcgtcgca tgaagtgcat ttaacgtatt accaattccg
     7081 gcaataattg ctgcagccgg taaaatggca actggtaaca ttaacgaacg ccctaaattt
     7141 tggaaaaatt tatacattga atgtcatcct tcttaaaata atgtagaaat ataaagatta
     7201 ctaatgtaac tagaataact acttcgatac tccgttatag tcacctaggc ttactaacca
     7261 gctatatttc tacctcaagt tattttataa actttttaca atttcatgca attcttgttg
     7321 taactttgct gttcgtgttt caatctcttt tgtaatataa tcgatacgct cgtttcgttt
     7381 taaatcttta ggtaaatcgt taatatcgat tggtttgcca atatttatgt atgcttgtcc
     7441 tgttaaaaga ccgtgaatct tagtaggacc aacataagca acaggtaata ttggtgactt
     7501 acttaacatt gcaattgttg aagcaccacg tttcaaaggt gcaccttctt gcgatgtgcg
     7561 agaacctgtt gggaagatac caactgtctt attatctttc aacaaattga ttgggcgttt
     7621 taaagtacta ggtcctggat tttcacgatc tacaggaaat gcatttaaag acgttaaaaa
     7681 tttaccaatc catttatttt tgaataattc ttttttagcc atataatgaa tttgattagg
     7741 atataatgcc atacctagca taatgacttc gttataactt tcatgcgtac aagttacgac
     7801 atatttacta tccttaggaa tattatcttt accgattacg tataatgatt ttgacatttt
     7861 aactaaaatg aaattcaaaa tcttactaat cactgaatac attgtgccac ctacttaact
     7921 tatttgttta taacaactag attttatcac tatattttta ctagaacaag atagtctgaa
     7981 aatacatcta aagttgtata gtgtattact agcaataatt ataaaaaaaa gacataatta
     8041 aagcatatat aaatcatata atggaggtta agtatgtcag attttaatca tacagatcat
     8101 tctacaacaa accatagcca aacacctaga tacagaagac ctaaatttcc atggtttaaa
     8161 acagtcatcg ttgcattgat tgctggaatt attggtgcac ttctagtact tggtataggc
     8221 aaagtattaa atagtacaat tttaaataaa gatggttcaa ctgttcagac aacaaataat
     8281 aaaggtggca atcaattaga cggtcaaagc aagaaattcg gtaccgttca tgaaatgata
     8341 aaatctgtct cccctacaat tgttggagtt attaacatgc aaaaagcatc aagtgtagac
     8401 gacttattaa aaggcaaatc atctaaacca tctgaagctg gagtaggttc aggtgttatc
     8461 tatcaaataa acaacaattc agcttatatc gttacaaaca atcatgttat tgatggcgca
     8521 aatgaaatta gagtccaatt acataataaa aaacaagtta aagcgaaatt agttggtaaa
     8581 gatgcagtaa ctgatattgc tgtacttaaa attgaaaata caaaaggtat taaagcgatt
     8641 caatttgcca actcttcaaa agtacaaact ggcgatagcg tattcgcaat gggtaaccca
     8701 ttaggattac aatttgctaa ctctgtaaca tctggtatca tttcagcaag cgaacgtacg
     8761 attgacgctg agacaactgg tggcaataca aaagttagcg ttcttcaaac agatgctgct
     8821 attaacccag gtaactcagg tggcgcatta gtagatatta atggtaattt agttggtatt
     8881 aactcaatga aaattgctgc gacacaagtt gaaggtatcg ggtttgctat tccaagtaat
     8941 gaagttaaag taacaattga acaacttgta aaacatggta aaattgaccg cccttcgatt
     9001 ggtattggtt taattaattt gaaagatatt cctgaagaag agcgcgagca acttcatact
     9061 gatagagaag acggtattta tgtcgtcaaa gctgatagtg atattgatct taaaaaaggt
     9121 gatattatta cagaaattga tggcaagaaa attaaagatg atgttgattt aagaagctat
     9181 ttatatgaaa ataaaaaacc tggtgaatca gtcactgtta ccgttatccg tgatggtaaa
     9241 acaaaagaag ttaaagtgaa attaaaacaa caaaaagaac aaccaaaacg tcaaagccga
     9301 tcagaacgtc aatcacctgg ccaaggcgat agagatttct ttagataatt tacagacaga
     9361 aaagtacatt aagagcctac tcattacatt cttaggaatg aatatgagta ggctctaatt
     9421 tatttagcta tgcaattata tttattgata gttaaccatg aagtattttt tcttaccgcg
     9481 acgaataatc gtaaattcgc catcaatttt atcttctggt gctaaagcat aattaacatc
     9541 ttgttgtctc tcaccattaa tataaatcgc accattgtta acatcttcac gtgcttgtcg
     9601 tttagaagga gaaatgcctg tttcaataag gacttcaacg atatttgttg tgtcatttga
     9661 taatgtcact tgaggcacat ctttaaatcc atcttttaat tctttcgctg ataatgattt
     9721 taaatcacca ctaaataatg cttgtgaaat acggattgca tcatttaatg catcttcacc
     9781 atgaataaat ttagttactt cttcagctaa tgttttttga gcttcacgta aatgcggtgc
     9841 ttcattttta gattgttcta agcgatcaat ttcttctttt cctaagaaag taaagtattt
     9901 taagaattta attacatctt cgtctgattg attaatccag aattgataaa attcataagg
     9961 acttgttttt tcagcatcta accaaacagc acctgactca gacttaccaa atttcttacc
    10021 atctgattta gttacaagcg gaatagttaa accgtatgcg tctgtttgac catacatacg
    10081 acgcattaat tcaataccac ttgtgatatt accccattga tctgatccac ctacttgaat
    10141 cttacaattc aattctctat tcaaatgacc gaaatcaata gcttgtaaaa tcgtgtatgt
    10201 gaattctgta tatgaaatac catgttctaa acgactttgg attgaatctt tacctaacat
    10261 gtaattaacg ccgacgtgtt taccatagtc acgtaaaaaa ctaattaatg agatttgtcc
    10321 taaccagtct ctattattaa caagcactgc accatggtct gttccaaatt caaaaatatt
    10381 gtgcatttgc ttactaatac cttcgatatt tttatctact tgttcttctg tttgtagcac
    10441 acgttcttct gatttacctg atggatcacc aatcatacct gtaccaccgc caattaaaac
    10501 gataggacga tgtccatgtt cttgaaaacg tcttaatgtt aagaatggta gtaagtgacc
    10561 aatatgtaaa ctatctgccg ttggatcggc accgcagtat aacgtcactt gttctttatt
    10621 taataaatct tcaatacctt gttcatcagt ttgttgataa ataagacctc tccattttaa
    10681 atcttcaatt aatacattcg tcattattat ttcctcctat ttataattat ttattgaata
    10741 cttgttaaaa tactttaaag ttttttgaac gtaaaaaaaa cccttacaac aaatatgtaa
    10801 gggcgcgatt gcacgttacc accaaactta aacataatca taagataatg ttcactctat
    10861 taatgatacg ttcattaata aacgtaggac atgttagtta taaaggtgta ttcatattat
    10921 taaaaacact agttcacagc gaccactagc tctctgatga tttcaaataa tattacttgt
    10981 ccttttatcc tattctttat gcattttccc taattataat taacgttaaa ataaaagtca
    11041 aattgcttaa atatggtata ctatacgtaa tttaggaggt taaagatgac gaatcaagac
    11101 aacaatcatc aattgaatca tcgtatatat cattttgaaa agatatataa agctatcaaa
    11161 catgtcattg tttttatatt tatgattttc attgccatcg ttgctatcgc tgtgattgcg
    11221 atgtctttat attttcatca tttaactaaa acgtccgact cattatcaga tgatgcttta
    11281 ataaaaaaag ttcgacaaat acctggcgat gaattattag atcataataa caaaaattta
    11341 ttatatgagt ataaccattc tcaaaactca ctcattatag gccctaaaac atcaagtcca
    11401 aatgtcatta aagcattaac gtcatctgaa gacactttat tttataaaca tgatggcatc
    11461 ttaccaaagg cgattttaag agcaatgata caagatattt ttaatactga tcaaagttca
    11521 ggtggtagca caattacaca acaacttgtt aaaaatcaag ttcttaccaa cgaaaaaaca
    11581 tatagtagaa aagcaaatga acttcgccta gcaattagat tagaacacct actctcaaaa
    11641 gatgaaatta tatatacata tttaaatata gttcccttcg gtagagatta taatggcgct
    11701 aatatttccg gaattgcatc cgcttcatat agtctatttg gtattccacc aaaagattta
    11761 tcaattgcac aatctgcata ccttatcggt ttgttgcaaa gcccatatgg ctatacaccc
    11821 tacgaaaaag atggaacgtt aaaatcggat aaagatttga aatatagtat tcaaagacaa
    11881 cattatgtat taaagcgtat gttaatcgaa gatcaaatca ctgaaaaaga atacaacgac
    11941 gcattaaaat atgatattaa atcacatttg ttaaatcgaa aaaagcgtta attgatgctc
    12001 actttttaaa gtaaccacaa caatgaatcc aaatattaaa aacagcagta agattatttt
    12061 caattagaaa atttctcact gctgttcttt ttatttactc taaaggaaag ccattaaacc
    12121 aatcaatagt ttataaatta attgctttca cattgtctac aaagttaatc atacatatgc
    12181 tatatttagt taattattta gattcttttc tgaatttagg aatgaataaa gctaacatac
    12241 ctaataacgc atataagccc caccatgatt ggcttgaagt tgtttctcca gtttttggta
    12301 gcattttaga ttgactaagt ttgttttctt tcgatggtgt gccggctttt tcttttgttt
    12361 tcactgtttt atctacagtt ttatgaatat cactcggcag atgttcagtt gtttttttgt
    12421 cagtaacttt gtctgtatta ttataatttt gtttcactac gtcaagcttt gctgcttttc
    12481 cagtatgatt atttttatcg gcaatatgat tcagctgtat gactttgtct ttatttttat
    12541 tagagtcttt atcagtatcg acattagatg acataccaac gctattatcg gcatctttat
    12601 ccacatttct atcagtatct ttggcaattt gagtatccat ttcttttaaa tcatatttat
    12661 cgaagtgatt attatccgac atatcggata aatgatcaac atcatgttgc acatctttat
    12721 caatattatt atcagcatct ttaaccacgt cagactctgg ttctatcaca tctgctttat
    12781 cagacgcatc tttaggattt gttgcagtgc tgctattttc agctacatct gtatcagcaa
    12841 ccttaccttc ttgtcctgtt tgtacattta gcggttcact cgtgttattt tgtgatgtat
    12901 catcatcttt tgtattgata tcctgattta taattctgac atgatattga ccttcataac
    12961 caatgtttgc cacaacgact ttaacaatcg cattgtaaac tgctttgtca ggtatatatg
    13021 ggaaaatcag cgttctagaa ttatttttag gatctttaga aacagtagtg acacgtttac
    13081 cttctacaat taaatctttc cagtaactgt catcctttgt tttcatcact acatattttt
    13141 gaccatttaa agttgctgta tagaatggat gttcaacaaa gccgtccata actgactcac
    13201 tattttcttc actttcaaaa acaacaaaat gcgcttcttg taaatctgtt aattgatcat
    13261 ttgtaggtgt aacattttca aattccgtca ctgctgattt aacttgatca gctaactcta
    13321 ctctagtttg atctaatttc tttttatatt ccgccttata tttttctggc aatttctctt
    13381 gtaatttttc taattcataa acttgtcttt ctaacgtttt agctttgtga tacggagcta
    13441 ataatttttg taaattgtat gtttcttcat ccacatagtc gtctgggtta ttagtaatag
    13501 gctgtgcaaa gaccattagc gtataatcat agtcttcatg gatgttctca ccatattcaa
    13561 tagatgacac aattttaact tctctcgtac cattagatac tgggaaacga atataggcat
    13621 aatctttatc agaatcatat gatactaatt cgactggtaa ctttttgtca ccttcataaa
    13681 cttcaaattt cttccatgtt gaagctgtct ttaaacctaa ttcaattatt ggtcctgttt
    13741 ttgtaaaaat gacagttgct ggttcaacag tactagcata atgatagaac tgtctttcac
    13801 ctttatcatt tttcatttga aaatcaattg gtcgccaatt atcagctgta tgttctttat
    13861 cgatgatagc cgggttttta attgcatctt gtagtgattc atctgctggt ggatactgtt
    13921 gattaacatc cgactgatta cttgactcat tcgttttatc gttagtatta ccattagaat
    13981 ttgtttcatg agctggttgg cttgacgctt gatctgcatt cgttgacgat tttggttgtg
    14041 caggttgact catattggtc gttgcctgcg gttgattatt agcattgttg atcgttgatg
    14101 tattttgatt agatgtattc gtgtttgttt gattacttgc gactgaactt gattgatcat
    14161 tcgttactac tgcatcattt gtatctgatt ttacaagtga aggatcgtta taaataggtt
    14221 tagcaaatac taatttagta taatcataat ttgtttcttc tccatcatca atttgagtcg
    14281 aagaaacaat tttcaattct tgtgtgccat ctgaaactgg gaatcgaata taggcatggt
    14341 cttctggtac aggactatat gatacaagtc tcactggcaa tttttgattg ttttcataga
    14401 cttcaaactt cttccatgtt gaagcagtat tgatgtctaa ttcaacttct gctttctttt
    14461 tagtgtaata cacatctgct ggatctttga tgctgaaaaa gtgatagtac tgcgtttcat
    14521 tgtttttatc taataactgg aaattgactt gttctcttgg acctatatca tgttctttat
    14581 tttctaatgc aggatcttta attgcatctt taagtgattc atccgctgca ggatagtttt
    14641 tcgcagtgtt tgctggttgc gtagcaggtt gtgtttgatt tgtatcctta ggtggctgag
    14701 ttgtagttgc attattattt tgattttccg agattttatc tgaagtattt gtattttctg
    14761 ctgcttgtgc ttgatgttga gaagtaatta aaaatagtgt actgacaatg accgatgcaa
    14821 cgcctagagt tgattttcta atagaataga aagaccttaa ttttgggtga tgtttgttca
    14881 tgttgttaac aactcctata agattatatt taattgataa taattatcaa tatcaattat
    14941 tagtgttaat tgtagcgcat cccaattaaa tattgcaacc tattttatta atttttttaa
    15001 tatagaatat tcattgcatc gctttcctat tcttcaagcc cactttttat cttcatatac
    15061 attaattaac caccttcaaa cattgtcgtt agattcgcca aattgaatct atttttagca
    15121 cagcaaaaaa ccgaactgct gaaataatgc atctccaaca gtccggtcta ttaaactatt
    15181 tacttatctt tattaaacaa ttgacatgat ttattagaat aacccaattg catgaccatc
    15241 atcagtaaca tccatgttta atgctgctgg ttttttaggt aaaccaggca tagtcatgat
    15301 tgcacctgtc aacgctacga taaatcctgc acctgttttc gcttctaatt cacgaattgt
    15361 aatttcaaat cctgatggtg cacctaacaa cgtttgatca tctgagaatg aatattgtgt
    15421 tttcgccata catactgggt aattatccca accattttct ttaaattgtt ttaattgttt
    15481 ttgcgcttta ctgctaaacg ttacttttga accgccatag atttcagtca caatcttttc
    15541 aatcttttgc tctaatggta attctaattc atataaaggt ttaaatgaat taggttgatc
    15601 aatgacttct aatacttcat ttgctaagtc aacgccacct ttaccacctt tttcccaaac
    15661 ttcagttaag gcaattcgta cgttattttc tttagcccaa gattttacat attctacttc
    15721 tgcatcggta tcatgtataa atgcattaat tgcaacaacc ggttctacac cgaatttttt
    15781 aatattatta acatgacgct ctaaattaac aattcctgct tttactgctt ctacattttc
    15841 ttcttttaaa ttatctttcg ctacaccacc atgcattttt aacgcacgaa ttgtcgcaac
    15901 aacaacgaca gctgccggat caaatcctgc ttcacgcgct ttaatgtcca tgaatttttc
    15961 agcgcctaag tctgaaccaa atccagcttc cgttacaacg atatcagcta aatcacgtgc
    16021 tgtttcagtt gctaaaattg agttacaacc gtgtgcgata ttcgcaaatg gtccaccatg
    16081 aactaatgca ggtgcccctt caattgattg tactaagttt ggttttattg catcttttaa
    16141 aatcattgca agtgcacctt ccacttttaa atctgcaact gtaactggct tgcgatctct
    16201 agtgtaacca atagtaatac gactaatttt atcttttaag tctttaatac ttctacttaa
    16261 acataaaatc gccataattt cagacgctac tgtaatatta aagccatctt cacgtggtac
    16321 accatttgta ggtccaccta acccaacgtt tacatgtcta agtgcacgat cattcatatc
    16381 taatacacgt ttccactcaa tacgtctttg atcgattcct aattcgttac cttggtgaat
    16441 atgattatcg ataaacgcag acaatgcatt atttgcagtt gtaatcgcat ggaaatctcc
    16501 gttgaaatgt aagttgatat cttccatagg taagacttgc gcataaccac caccagtcgc
    16561 accacctttg ataccaaatg ttggtcctaa agcaggctct cttaatgcaa ccataacgtt
    16621 tttatttaac tcatggaatg catcagctaa accaactgta accgttgatt taccttcacc
    16681 agctggtgtt gggctcatcg cagttactaa aacaactttc cctttgtttt ctcttggcgt
    16741 aattttatta atgtcgattt tagctttgta atgaccataa ggttctaatg catcctctga
    16801 aatacctact gatgcagcaa tatccttaat tggttgtagt gttgattgat tcgcaatatc
    16861 taaatctgat aaatgagtca acttttttcg cccctttttg tttaatttat gcatttataa
    16921 tatgtaagtt gtagctaaga aatttttact tacattcata taataacgaa ctgttaaaaa
    16981 cttgtcgact aaatcgggtt agcgctttca tttttgcaat aaattcactt attaaagttt
    17041 tgtattatac aacttttagc gcttgatact attgataact atatttttct attatttaaa
    17101 ataatcatct tccaaagatc atattaaaaa taaaaagcaa tataaagata tgccattatt
    17161 gttatgtcat cattttcaaa tgctttctac gaaatgatat gacacaagtt aacagttctt
    17221 tatattgctt atcgtaaagt aaacgattat ttaaacattg acatgaaata tgttgtcacc
    17281 ctttattctt cgaaaaaaat cttcaataac attcatgtca ttattccatt gtacttaaat
    17341 ccccagcatc taaatttaat tcccaagctt ttaatacacg tctcataatt ttacctgacc
    17401 gtgttttagg taatttatct ttaaattcga tttcacgtgg tgctgcatgt gccgacaaac
    17461 cttctttaac aaatatacga atttcttctt ttaattcgtc tgttggttca tatccttttc
    17521 tcagtgcaac aaacgcctta attatttcac cgcgaaccgg atcaggttta ccaataattc
    17581 ctgcttcggc aactgcttcg tgttcaacca atttagactc aacctcaaat ggtccaactc
    17641 gttcaccagc tgtcataatt acatcatcaa cacgtccttg gaaccagaag taaccatctt
    17701 catctttata tgccgaatca ccagatacat accagtctcc aataaaatat gatttatatt
    17761 tttctggatt cttccagata cgatacatca ttgatggcca gccttttttt atagcaaggt
    17821 tgcccattcg atttggtggt aattcattcc ctgcatcatc gataattgca gcttgaatac
    17881 caggtaatgg tttgcccatt gagccaagct tgacgtccat cgttggatag ttaacaatca
    17941 tatgtccacc tgtttctgtc atccaccaag tatctaacac cgttaaaccg tatacttttt
    18001 tcgcccattt tataacttca ggatttaaag gctcacctac tgatagaatc gaacgtaacg
    18061 atgacaagtc atatttctca acaatatcgt caccagcact cattaacatt cttaaagctg
    18121 ttggtgccgt ataccaaatc gtcactttaa aatcttcaat catactatac cactgttctg
    18181 gcgaaaagcg accaccagct atacaatttg tagcgccatt taaccatggt gcaaaaatac
    18241 cataagatgt tcctgtaacc caacctggat ctgctgtaca ccaataaaca tcatcttctt
    18301 gtaaatctaa tacatatttt ccagaaatat agtgcactaa cattgcttgt tgaacatgca
    18361 atacaccttt aggttgccca gtagaacctg atgtataatg taaaatcaaa ccatcatccg
    18421 actttaacca ttcaatgtca aattcatcgc tagcagtttc catcaaacta atgaagtcta
    18481 tgtaattgtc ttctacatcc tcatctacga caacaatttt tttcaagttt ggtaatttat
    18541 ctacaggtac tcgaggtaac aatgccttat tagtaattaa cactttagct tcactgttct
    18601 ctaatctatc cgcaactgcc ttttccataa atgcttcaaa taacggccca acaattgcac
    18661 caatttttaa aacacctaac aacgcaaaat atagttcagg tgtacgcgac ataaatataa
    18721 atactctgtc acctttgtca acttctgcat gttcagacaa aacattcgct gctttattag
    18781 ataaccgttg catatcttta taagtatacg attcttttct gtgctcatct ttgtaattta
    18841 acgctatttt atcccctaat ccttgatcta catggcgatc tatgcattca tatgccatgt
    18901 tcatttttcc agtttcactc caagaaaatg cttgttctac gtctttccaa tcaaaagtat
    18961 tatatgtttc ttcataatct ttaaggttat gtttaccttg cgctccttta taaacttcga
    19021 ctttcatttg aaactccccc tttgttatgt gaaaacgctt tctttctcaa tattatacat
    19081 aacatttcta attattcaaa atttttactt ttatcctttt tctagtatta attattgtaa
    19141 attttctata taatgaattt aatacaatca cgacgtcgat tgaggagttg aaaatatgaa
    19201 tcatttaaag acgtatcaat ccgaagatta ttacattcat gacaagcaat ttgttattga
    19261 aggtccttta acacacgaag atttgaaagc gcttactttc gatgcgcatt taaccgcatt
    19321 tagagatgct gaagatcagt ataaagcttt gttagaaatt acaacattac cagaaggtag
    19381 aatttatgtt gctcgccaag atcaactcat tgtgggttat gtcactttcc actatcctga
    19441 tgaaattgag cgctggtcta caggtaagct tccatattta atcgaattgg gggcaattga
    19501 agtcagcatc aattttaggc aattacaact tgcagaaaag ctgatacaac ttagcctttc
    19561 tacaccagaa ttcgagaatt atatcgttat aactacagaa tattactggc attgggattt
    19621 aaaaaattca aagttagatg tatttgacta taaaaaatta atgcagcggt taatggcaac
    19681 tggtggactt gaaatattcg ctacagatga tccagaaata acaagtcatc cagctaattg
    19741 tttaatggca agaattggca aaaacattac attagaacag caacaagcgt ttgatgatat
    19801 tcgttatatg aatcggtttt tcttttaatt tttggaatat cggagggatt atatgcaaca
    19861 acattcatca aaaactgcat atgtttattc agataagtta ttacaatatc gatttcatga
    19921 ccaacatccc ttcaatcaaa tgcgtttaaa attaacaaca gagctacttt tgaatgcaaa
    19981 tttattgtct ccagaacaaa tagtacaacc tagaattgca acagatgacg aattaatgtt
    20041 aattcataaa tatgattacg tcgaagctat taagcatgct tcacatggca ttatcagtga
    20101 agatgaggct aagaaatatg gattaaatga tgaagagaat ggtcaattta agcatatgca
    20161 ccgccatagt gccacaattg ttggaggcgc tttaacttta gcagatctta ttatgtcagg
    20221 caaagtatta aatggttgtc acttaggtgg tggtttgcat cacgctcaac ctggtcgagc
    20281 aagtggtttt tgtatataca atgatattgc aattaccgca caatacttag ctaaagaata
    20341 caatcaacgc gttttaatca tagataccga tgcacatcat ggagatggta cacaatggag
    20401 tttctatgcc gataaccatg ttactactta ttctatccat gaaaccggaa aatttctttt
    20461 cccaggctct ggtcactata ctgagcgcgg tgaagatatc ggctatggac acactgtaaa
    20521 tgtcccactt gaaccgtata cagaagatgc atcatttttg gagtgtttta aattaacagt
    20581 tgagcctgtc gtaaagagtt ttaaacctga tattattcta agcgtaaatg gtgtcgatat
    20641 acattatcgt gatccactaa ctcatctaaa ttgtacgtta cattcattat atgaaattcc
    20701 atattttgta aaatatttag ctgattctta tacgaatgga aaggtaatta tgtttggtgg
    20761 cggaggctac aatatttgga gagtcgtacc acgtgcatgg agtcatgtat tcttaagttt
    20821 aattgatcaa ccaattcaaa gtggttattt accgttagaa tggattaata aatggaaaca
    20881 ttattcatct gaattattac ctaaaagatg ggaagatcgt ttaaatgatt atacctatgt
    20941 cccccgcaca aaagaaatta gtgaaaaaaa taaaaaatta gctttacata tagcgagttg
    21001 gtacgaatct actcgtcaat aagtaaccta atctgcaacg attttaaaag ataaataaaa
    21061 ggcattcttc caacacccat ataatttggg tcgttagatg aatgcctaat tttgtgaatt
    21121 tattttgtag ttcctcggta ttcaattctg tgaggtaaaa ctacatttgg ttcttctatc
    21181 ttttcatcgt tcatatattt tgttaataag cgcatcccta ctgcaccgat atcatataat
    21241 ggttgaataa cactagaaag ttgtggtcta accatctcaa ctaatcgtgt attattgaaa
    21301 ctaataattt gtaattcctc tggaacttta ataccagcat ccattgcact atgcataata
    21361 ccaattgctt cttcgtcgct gatacataaa atggcatctg gcaaattgcc tttcattttg
    21421 gcaaaagctt ttacgccttc tttataactt tcagcaccag aacaattcaa tgtatcacct
    21481 aattgaaggc catttttatt taacacttca gttaaacctt ctaaaacatc ttcttgagct
    21541 tttttagaat gttctccacc tactaaagca aatgatttag cgcctttttc aattaattct
    21601 cccgtaattt ctttcgcagc ttcagtaaaa tcaatattaa ctgatgctat atgtgcatcc
    21661 ttaccatttg ttcctgatac tactacaggt acagatgatt gatttatcaa ttctttcatt
    21721 tcttcagtaa ttgtaccacc aaggaaaata ataccatcaa cctgtttact taataagtta
    21781 ttaaaaattt ctttttcctt ttcaggatcg ttatctgaat ttgaaataat tgagtgatat
    21841 ttatacattg ttgcaatatc ttcaagtcca cgagcaagtt gtgaataata gatattagat
    21901 atatctggaa tgatcacacc tactgttgtt gtctttttac tagctaaacc tctagcaaca
    21961 gcatttggac gataattcaa acgcttaatg acttcgttaa ctttattttt agtttctgct
    22021 ttaacatttt ggttcccatt aacaacacgc gacactgtgg ccatagagac acgcgcttct
    22081 cttgctacat catatatagt aactgtcata atttc
//
LOCUS       DALPQQ010000031        21384 bp    DNA     linear   BCT 22-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus strain K18-6-464
            SAMD00233528-rid16434743.denovo.031, whole genome shotgun sequence.
ACCESSION   DALPQQ010000031 DALPQQ010000000
VERSION     DALPQQ010000031.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMD00233528
            Sequence Read Archive: DRR236061
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 21384)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 21384)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001543423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001543423.1
            Genome Coverage       :: 77x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/22/2022 17:09:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,811
            CDSs (total)                      :: 2,743
            Genes (coding)                    :: 2,689
            CDSs (with protein)               :: 2,689
            Genes (RNA)                       :: 68
            rRNAs                             :: 2, 4, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 4, 2 (16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 54
            CDSs (without protein)            :: 54
            Pseudo Genes (ambiguous residues) :: 0 of 54
            Pseudo Genes (frameshifted)       :: 27 of 54
            Pseudo Genes (incomplete)         :: 27 of 54
            Pseudo Genes (internal stop)      :: 10 of 54
            Pseudo Genes (multiple problems)  :: 10 of 54
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..21384
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMD00233528-rid16434743.denovo.031"
                     /strain="K18-6-464"
                     /db_xref="taxon:1280"
                     /geo_loc_name="Japan: Niigata"
     gene            59..802
                     /gene="sarU"
                     /locus_tag="O7798_001030"
     CDS             59..802
                     /gene="sarU"
                     /locus_tag="O7798_001030"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501259.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HTH-type transcriptional regulator SarU"
                     /protein_id="HDC2863297.1"
                     /translation="MDYQTFEKVNKFINVEAYIFFLTQELKQQYKLSLKELLILAYFY
                     YKNEHSISLKEIIGDILYKQSDVVKNIKSLSKKGFINKSRNEADERRIFVSVTPIQRK
                     KIACVINELDKIIKGFNKERDYIKYQWAPKYSKEFFILFMNIMYSKDFLKYRFNLTFL
                     DLSILYVISSRKNEILNLKDLFESIRFMYPQIVRSVNRLNNKGMLIKERSLADERIVL
                     IKINKIQYNTIKSIFTDTSKILKPRKFFF"
     gene            complement(1013..1879)
                     /gene="galU"
                     /locus_tag="O7798_001031"
     CDS             complement(1013..1879)
                     /gene="galU"
                     /locus_tag="O7798_001031"
                     /EC_number="2.7.7.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000721336.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UTP--glucose-1-phosphate uridylyltransferase
                     GalU"
                     /protein_id="HDC2863298.1"
                     /translation="MKKIKKAIIPAAGLGTRFLPATKAMPKEMLPILDKPTIQYIVEE
                     AARAGIEDIIIVTGRHKRAIEDHFDSQKELEMVLKEKGKSELLEKVQYSTELANIFYV
                     RQKEQKGLGHAISSARQFIGNEPFAVLLGDDIVESEVPAVKQLIDVYEETGHSVIGVQ
                     EVPEADTHRYGIIDPLTKNGRQYEVKKFVEKPAQGTAPSNLAIMGRYVLTPEIFDYLK
                     TQKEGAGNEIQLTDAIERMNNDNQVYAYDFEGERYDVGEKLGFVKTTIEYALKDDSMR
                     EELTRFIKALGL"
     gene            complement(2059..4881)
                     /gene="fnbB"
                     /locus_tag="O7798_001032"
     CDS             complement(2059..4881)
                     /gene="fnbB"
                     /locus_tag="O7798_001032"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001566815.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fibronectin-binding protein FnbB"
                     /protein_id="HDC2863299.1"
                     /translation="MKSNLRYGIRKHKLGAASVFLGTMIVVGMGQEKEAAASEQNNTT
                     VEESGSSATESKASETQTTTNNVNTIDETQSYSATSTEQPSQSTQVTTEEAPKTVQAP
                     KVETSRVDLPSEKVADKETTGTQVDIAQPSNVSEIKPRMKRSTDVTAVAEKEVVEETK
                     ATGTDVTNKVEVEEGSEIVGHKQDTNVVNPHNAERVTLKYKWKFGEGIKAGDYFDFTL
                     SDNVETHGISTLRKVPEIKSTDGQVMATGEIIGERKVRYTFKEYVQEKKDLTAELSLN
                     LFIDPTTVTQKGNQNVEVKLGETTVSKIFNIQYLGGVRDNWGVTANGRIDTLNKVDGK
                     FSHFAYMKPNNQSLSSVTVTGQVTKGNKPGVNNPTVKVYKHIGSDDLAESVYAKLDDV
                     SKFEDVTDNMSLDFDTNGGYSLNFNNLDQSKNYVIKYEGYYDSNASNLEFQTHLFGYY
                     NYYYTSNLTWKNGVAFYSNNAQGDGKDKLKEPIIEHSTPIELEFKSEPPVEKHELTGT
                     IEESNDSKPIDFEYHTAVEGAEGHAEGTIETEEDSIHVDFEESTHENSKHHADVVEYE
                     EDTNPGGGQVTTESNLVEFDEDSTKGIVTGAVSDHTTIEDTKEYTTESNLIELVDELP
                     EEHGQAQGPIEEITENNHHISHSGLGTENGHGNYGVIEEIEENSHVDIKSELGYEGGQ
                     NSGNQSFEEDTEEDKPKYEQGGNIVDIDFDSVPQIHGQNNGNQSFEEDTEKDKPKYEQ
                     GGNIIDIDFDSVPHIHGFNKHTEIIEEDTNKDKPNYQFGGHNSVDFEEDTLPQVSGHN
                     EGQQTIEEDTTPPIVPPTPPTPEVPSEPETPTPPTPEVPSEPETPTPPTPEVPTEPGK
                     PIPPAKEEPKKPSKPVEQGKVVTPVIEINEKVKAVVPTKKAQSKKSELPETGGEESTN
                     NGMLFGGLFSILGLALLRRNKKNHKA"
     gene            complement(5563..8619)
                     /gene="fnbA"
                     /locus_tag="O7798_001033"
     CDS             complement(5563..8619)
                     /gene="fnbA"
                     /locus_tag="O7798_001033"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000794614.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fibronectin-binding protein FnbA"
                     /protein_id="HDC2863300.1"
                     /translation="MKNNLRYGIRKHKLGAASVFLGTMIVVGMGQDKEAAASEQKTTT
                     VEENGNSATDNKTSETQTTATNVNHIEETQSYNATVTEQPSNATQVTTEEAPKAVQAP
                     QTAQPANIETVKEEVVKEEAKPQVKETTQSQDNSGDQRQVDLTPKKATQNQVAETQVE
                     VAQPRTASESKPRVTRSADVAEAKEASNAKVETGTDVTSKVTVEIGSIEGHNNTNKVE
                     PHAGQRAVLKYKLKFENGLHQGDYFDFTLSNNVNTHGVSTARKVPEIKNGSVVMATGE
                     VLEGGKIRYTFTNDIEDKVDVTAELEINLFIDPKTVQTNGNQTITSTLNEEQTSKELD
                     VKYKDGIGNYYANLNGSIETFNKANNRFSHVAFIKPNNGKTTSVTVTGTLMKGSNQNG
                     NQPKVRIFEYLGNNEDIAKSVYANTTDTSKFKEVTSNMSGNLNLQNNGSYSLNIENLD
                     KTYVVHYDGEYLNGTDEVDFRTQMVGHPEQLYKYYYDRGYTLTWDNGLVLYSNKANGN
                     GKNGPIIQNNKFEYKEDTIKETLTGQYDKNLVTTVEEEYDSSTLDIDYHTAIDGGGGY
                     VDGYIETIEETDSSAIDIDYHTAVDSEAGHVGGYTESSEESNPIDFEESTHENSKHHA
                     DVVEYEEDTNPGGGQVTTESNLVEFDEESTKGIVTGAVSDHTTVEDTKEYTTESNLIE
                     LVDELPEEHGQAQGPVEEITENNHHISHSGLGTENGHGNYDVIEEIEENSHVDIKSEL
                     GYEGGQNSGNQSFEEDTEEDKPKYEQGGNIVDIDFDSVPQIHGQNKGNQSFEEDTEKD
                     KPKYEHGGNIIDIDFDSVPHIHGFNKHTEIIEEDTNKDKPSYQFGGHNSVDFEEDTLP
                     KVSGQNEGQQTIEEDTTPPIVPPTPPTPEVPSEPETPTPPTPEVPSEPETPTPPTPEV
                     PSEPETPTPPTPEVSAEPGKPVPPAKEEPKKPSKPVEQGKVVTPVIEINEKVKAVAPT
                     KKPQSKKSELPETGGEESTNKGMLFGGLFSILGLTLLRRNKKNHKA"
     gene            complement(8603..8704)
                     /locus_tag="O7798_001034"
     CDS             complement(8603..8704)
                     /locus_tag="O7798_001034"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501263.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDC2863301.1"
                     /translation="MLLKTEQYRLAFIKFKKLMNFAFKGRYYSEKQS"
     gene            complement(9087..10445)
                     /locus_tag="O7798_001035"
     CDS             complement(9087..10445)
                     /locus_tag="O7798_001035"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501265.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="gluconate permease"
                     /protein_id="HDC2863302.1"
                     /translation="MFNEIWPLISVVLGIVILLVLIIGFKLNTFISLIITSMITALML
                     GIPLTKIMETIEKGMGSTLGHIALIFGLGAILGKLLADGGGATRIADTLIQKFGQKHV
                     QWAMLVAAFIVGIALFFEVGLVLLIPLVFTVAKRANVSVLKLGLPMVTALSVTHGFLP
                     PHPGPVVIAKELKANVGDVLLYGMIIAIPVTLIAGPIFNKVAQKMIPSAYTREGDISA
                     LGAQKEFTDQEMPGFGMSLLTATLPVILMLVSTITQLVTGHDKPTNLFESIIYMIGTA
                     GTAMLIAVLFAIVTMGLMRKRKMNHIMESVTNAIYPIGMMLLIIGGGGTFKQVLIDGG
                     VGNTIAKMFEGTEMSPILLAWIVAAVLRIALGSATVAAISTTGIVLPLLQSSDVNVAL
                     VVLAIGAGSVILSHVNDAGFWMFKEYFGLTVKETFLTWSLLETIISVSGIIFILFISL
                     FV"
     gene            complement(10562..12115)
                     /gene="gntK"
                     /locus_tag="O7798_001036"
     CDS             complement(10562..12115)
                     /gene="gntK"
                     /locus_tag="O7798_001036"
                     /EC_number="2.7.1.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501266.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="gluconokinase"
                     /protein_id="HDC2863303.1"
                     /translation="MKYMIGVDIGTTSTKSVLYDENGTFIMKHQIGYDLHTPNVDVSE
                     ENPDELFDAVLMTIKYVMRESKVNKDDIKFVSFSAQMHSLIAMDQQHQRLTNNITWAD
                     NRAAKYATVINEVHDGNAIYQRTGTPIHPMSPLAKIFWMKHEWQDVFQRTAKFADIKT
                     YIFYHLFDTYIIDYSMASATGMFNLETLDWDVEALELLGISKEMLPELVPTTYVMKGM
                     KERYATLMGLNKDTPFVIGASDGVLSNLGVNSVGKGEVAVTIGTSGAIRTVIDKPRTD
                     YKGRIFCYVLTEDHYVIGGPVNNGGVVLRWLRDELLASEVETAKRLGVDPYDVLTQIA
                     KRVKPGADGLIFHPYLAGERAPLWNANARGSFFGLTLSHKKEHMIRAALEGVLYNLYT
                     VYLALIEVMNETPKMIKATGGFAKSEVWRQMMSDIFDTELVVPESYESSCLGACVLGL
                     KAVGDIEDFSIVSSMVGATNNHTPIEENVTVYQEIVSIFINLSRSLTENYEQIADFQR
                     QHIAENKTQ"
     gene            complement(12139..12819)
                     /locus_tag="O7798_001037"
     CDS             complement(12139..12819)
                     /locus_tag="O7798_001037"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501267.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GntR family transcriptional regulator"
                     /protein_id="HDC2863304.1"
                     /translation="MMYGYPEKWLEGMTTGEGIAAELRLGIVNGHIAEGTLLTENQMA
                     KQFNVSRSPIRDAFKLLQQNQLIQLERMGAHVLPFGEQEKKEMYDLRLMLESFAFSRV
                     KNQERLPIVKEMKKQLEMMKVAVKFEDAESFTKHDFEFHETLIKASNHQYLNSFWSHL
                     KPVMMALVLTSMRQRMQQNPQDFERIHHNHQVFIDAVEQYDSQILKEAFHLNFDDVGK
                     DIEGFWLN"
     gene            complement(12973..13737)
                     /locus_tag="O7798_001038"
     CDS             complement(12973..13737)
                     /locus_tag="O7798_001038"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501268.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MerR family transcriptional regulator"
                     /protein_id="HDC2863305.1"
                     /translation="MSNYSTGELAKLCNVTTRTIQYYDRKGILKPQGFTEGKRRVYTE
                     QQRQTLELILLLKDLGCALSDIDMLLKGEGTLKTLNTLLTMKQQEINQQVKQQQAVLN
                     KIKNVQYYVNEASTSPITHLKDIEHVMSKSAEMKSIRRNIWISAGIIGIIQYSSIISA
                     ILMKNKWPFLIALPFMIGYGIGVTFYYQQKVAYLCPNCQHIFSPSLWAVIKAKHTATT
                     RRFECPNCHETHYCIEVPKAHMSTEQLEISHIQHNN"
     gene            complement(13902..14594)
                     /locus_tag="O7798_001039"
     CDS             complement(13902..14594)
                     /locus_tag="O7798_001039"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501269.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GTP pyrophosphokinase family protein"
                     /protein_id="HDC2863306.1"
                     /translation="MYVDRKPSLYLEDLRHDFKNSLSKFENGDEAFDTLLGFVELDHI
                     YSSALKEISTKLSILDDNFNHIYKHNPIHHMERRVKEMRSLIEKLNRKGLQISAETAK
                     EHILDIAGIRVVCNYLDDIYLIEEMLLKQEDVQLIKRKDYIQHPKENGYRSLHIVVSI
                     PVFLAERVEVLPVEIQIRTIGMDMWASLEHKIRYKNNAETEKYRDLLKECATEITEVE
                     DKLQQIHSEITE"
     gene            complement(14825..15241)
                     /locus_tag="O7798_001040"
     CDS             complement(14825..15241)
                     /locus_tag="O7798_001040"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501270.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2188 domain-containing protein"
                     /protein_id="HDC2863307.1"
                     /translation="MPFTMKGYPEKWKEFEVIKRQKAIEIANAMLKEGYLEKDVVPIA
                     AKKAKDWYRALSKEEIKALEEENFVQFHTATMEKTEVDSEYATTDNEEHIQEQSNQDK
                     SYFDSESIGNQSGGVRQREPLMDGPHPKVVESFKDV"
     gene            complement(15380..17203)
                     /locus_tag="O7798_001041"
     CDS             complement(15380..17203)
                     /locus_tag="O7798_001041"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000586397.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FUSC family protein"
                     /protein_id="HDC2863308.1"
                     /translation="MIIPAIIGYLCGNFQFGLLVATGTLAHIYVFKGPSRSKLRTVII
                     CNLAFAICMMLGTLTAKTPLVFGMTLLIVTVIPFYIFTALKIAGPSSTFFIVTFSLPI
                     NLPIAPEEALYRGFAILVGGILATMMVLITIVFSKNKAEEQAIQNDFKLISKLLHTYN
                     DKSAFLQVAKTAVDSFKASDKLLITSTSSNDKLSRRFQKLLLLHTSAQGIYSELLELN
                     AKQIRPLPDELIEMMDHIIAQLDNSEENVRYWRKEVTVTEEFQNLFNHILKIDEMVHA
                     NEARIAYEADMRKPLYSKRIYQNLTLDSIVFRNTLRYTAIMMIAIFIALMFDFEKAYW
                     IPLSAHTILLGTSTIHAIERGMARGLGTILGVLVLSVILLFSIPTPVAVILMGIAALF
                     TEALVGANYAIAVVFITIQVILMNGLASQNLTINIAFPRVIDVAMGIVIAIIGLFVLG
                     QRTASALLPNVMAEVVRKEATLFHYLFSENQYKDDVYQKNTAMNLSVKLNNMTQVYNA
                     ANGELFSDKTLIQNYYPSLFALEEISFMLNRAMANEDRLTINEQLMGEYLAIFENIAK
                     HFELNTELEIKILPDLPQYNYIQSAMMNIQHNGFRERDKNV"
     gene            complement(17681..18958)
                     /locus_tag="O7798_001042"
     CDS             complement(17681..18958)
                     /locus_tag="O7798_001042"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002463344.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HDC2863309.1"
                     /translation="MKEKRTNVRWMFALAFFFIGVIAYMDRANISYIAKQMMDDLGMT
                     KPQFGLLASFFSLGYALMQVPSGMLAEKFGPRKMITIALVWWSAFTILTGMIKNHGLI
                     YLVRFLFGVGEAPMYPSNAVFNSFWFSKNEKGRASSALLAGSYFGPVLAPIVTIAIVN
                     AFNWQAVFYIFGAVGILMAVLWAIIAKDLPEQHRMVNEAEKRFIMENRDIVATEKSSP
                     PWNDFFKRFSFYAIAIQYFVVQFIITLFLIWLPTYLTEVFHVNFKEMSISSLPWLLMF
                     FLILSAGAISDRVLGLGRSKFVARGVIAIAGFIVFAVSIIFAVRTGNLYVSIFWLSLG
                     LGGIGISMGMSWAAATDLGRNFSGTVSGWMNLWGNIGALISPLLAGLFVEHLGWTMTF
                     QLLIVPAVIAVIMWFYVKPDQPLIVSDDKAIEK"
     gene            19506..20117
                     /locus_tag="O7798_001043"
     CDS             19506..20117
                     /locus_tag="O7798_001043"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501274.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DedA family protein"
                     /protein_id="HDC2863310.1"
                     /translation="MEQIITEFISRFGYAAIFILILLENVLPIVPSEIILTFAGLMSV
                     KSHLSILTLFIIATIASFIGLLILYYICRLISEERLYRFIDRHGKWIKLKSKDLKRAN
                     DWFKKYGVWAVFICRFIPVLRVLITIPAGVNRMNVVTFTVISLIGTTIWNFGLILLGR
                     TLSDSFGMLMTGLHTYSRIMYVVIIIAVIYFAIRYIGKRKRVK"
     gene            complement(20126..20224)
                     /locus_tag="O7798_001044"
     CDS             complement(20126..20224)
                     /locus_tag="O7798_001044"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501275.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDC2863311.1"
                     /translation="MPNKLKKAVNHFNRWNDSLLFVYRNLKFMPLC"
     gene            complement(20214..21377)
                     /locus_tag="O7798_001045"
     CDS             complement(20214..21377)
                     /locus_tag="O7798_001045"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501276.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HDC2863312.1"
                     /translation="MINSNIRLYILGFLAFFASLIQNIYTPIIPRLYDDFQVPLFWIN
                     ATVGGFIFIVAVMQIVLGRSIDSRDSKKVLLTGLGIVIISSFICAVTHNFILFAISRL
                     FQAIGCGIIPLVTLTLLAKLSTDNGRAQAMANYQIFLSCAPALAPILGSTLGARWDYI
                     GIFSFLLVISIVLFLIIFFIDIPNVEKGIVKLTEKIEEKYLTDKVFITLVTLGFLIFF
                     TYFSILVYLPTLLNNTYDIGVGISGVLFLPITVSVILGSLFYKRFSKKYNEIMILRVT
                     ITGFAIFTLLFGWLNESNVIILSVIIFILGTCVGIVPALLSTIISKRFEHIKGKVLGV
                     FNFVRYIGMTVGALLIGIISQPLVAFYFTTITIMLIVIFLYIKIVDFQLKYAK"
BASE COUNT         6464 a         4058 c         3090 g         7772 t
ORIGIN      
        1 atattacttt aaataatata aagtattggg acatcagaaa atagtaggag aatgtaaggt
       61 ggactatcaa actttcgaaa aggtcaataa attcataaat gtagaagcgt acatattttt
      121 tctcactcaa gagttaaagc aacaatataa attatcatta aaagaattgt tgatattagc
      181 atatttttat tacaaaaatg aacacagtat ttcactaaaa gaaatcattg gtgacatact
      241 ttacaaacaa tctgatgttg taaagaacat taagtcacta tctaaaaaag gatttataaa
      301 taagtctaga aacgaagcag atgaacgccg tatttttgtt tcagttactc caatacaacg
      361 taaaaagatt gcttgtgtta ttaatgagtt agataaaata attaaaggat ttaataagga
      421 aagagactac ataaaatatc aatgggctcc aaaatatagc aaagaatttt ttatactttt
      481 tatgaacatt atgtactcaa aagatttttt aaaatatcga tttaatttaa catttcttga
      541 tttatctatc ttatatgtaa tatcatctcg aaaaaatgag atactaaatt taaaagattt
      601 gtttgaaagt attagattta tgtatcctca aattgttagg tcagttaata gattaaataa
      661 taaaggtatg ctaatcaaag aacgatccct tgcagatgaa aggattgtgt taatcaaaat
      721 aaataaaata caatataaca ctattaaaag catattcaca gatacttcca agattctcaa
      781 accaagaaaa tttttctttt aaatttaaac agatttacct cttgataaaa taaataagca
      841 atcatactac ttctcaattt agtataaata aaaatacata attaactttc ttttgttttt
      901 atattatttc aataccctac tatatatcac aacacataaa ttaagcatga cactcattca
      961 atttagttca ccatttcgtg ttccaatttt actgagtatc atgcttttaa tgttataaac
     1021 ctaatgcttt aataaatcgt gttaattctt ctcgcatact gtcatctttc aatgcatatt
     1081 ctatggtagt tttaacgaag cctaattttt ctccaacgtc ataacgttcg ccttcgaagt
     1141 catatgcata cacttggtta tcattattca tacgttcaat cgcatctgtt aactgaattt
     1201 cgttacctgc gccttctttt tgcgttttta aataatcgaa aatttcaggc gttaatacat
     1261 aacgtcccat aatagctagg tttgatggtg ccgtaccttg tgctggcttt tcaacaaact
     1321 ttttcacttc atactgacgt ccgtttttag ttaatgggtc aataattcca taacgatgag
     1381 tatctgcttc cggaacttct tggacaccta taactgagtg ccctgtttct tcataaacgt
     1441 caatcaactg tttcactgct ggcacttcag attcaacaat atcgtcacct aataataccg
     1501 caaatggttc attgccgata aattgacgcg cagaactaat cgcatgccct aaaccttttt
     1561 gttctttctg ccttacataa aaaatattcg caagttccgt tgaatactga actttctcta
     1621 gtaattcaga tttacctttt tcttttaaca ccatttctaa ttctttttga ctatcaaaat
     1681 gatcttcaat cgcgcgtttg tggcgacctg tcactataat aatatcttca attccagctc
     1741 ttgcagcttc ttcaacgata tattgtattg tgggtttatc taagatagga agcatttcct
     1801 ttggcatcgc tttagttgct ggtaaaaatc tagtccctaa accagcagcg ggaatgattg
     1861 ccttttttat ttttttcaaa gttaatgtgc tccttttcct aagtattaaa tctatgtatc
     1921 aacgtcattt taacactaat tagaacgcct tcatagtgtc attgagtatg taattatttc
     1981 ttgggaaatt tgttttaatt ttaaaaaaca ggcttacttc atataattta tgaaataaac
     2041 ctgtcaattt tggattgatt atgctttgtg attcttttta tttctgcgta ataacgctaa
     2101 acctaaaatg ctaaataatc cgccgaacaa catgccgttg tttgttgatt cttctccacc
     2161 tgtttcaggt agttcagatt tcttagattg tgctttttta gttggtacca ctgctttaac
     2221 cttttcattg atttcaataa caggtgttac tactttacct tgttccactg gtttagaagg
     2281 ttttttaggt tcttctttag caggtggtat tggtttacca ggttcagttg gtacctctgg
     2341 cgttggcggt gttggtgttt ccggctcgct tggtacttct ggtgtcggtg gtgttggtgt
     2401 ttccggctcg cttggtactt ctggtgtcgg tggcgttggt ggcacgattg gaggtgttgt
     2461 atcttcttca atcgtttgtt gaccttcatt atgaccactt acttgtggaa gtgtatcttc
     2521 ttcaaagtca acactattgt gtccaccgaa ttgataattt ggtttatctt tatttgtatc
     2581 ttcttcaata atttcagtgt gcttattgaa tccgtgaata tgtggcacac tgtcgaagtc
     2641 gatatcaatg atattaccac cttgttcata cttaggtttg tctttctctg tatcttcttc
     2701 gaatgattgg ttaccattat tttgaccatg aatttgaggt acactatcga aatcgatatc
     2761 tacgatattg ccaccttgtt catatttcgg tttatcttct tctgtgtctt cctcaaatga
     2821 ctgattaccg ctattttggc caccttcgta acctaattca ctcttaatat ccacgtggct
     2881 attttcttcg atttcttcaa tcacgccata attaccgtga ccattttcag ttcctaaacc
     2941 agaatgagaa atatgatgat tgttttcagt aatttcctcg attggtcctt gcgcttgacc
     3001 atgttcttca ggtagttcat ctactagttc aatcagatta ctttcagtcg tatattcttt
     3061 cgtatcttca attgttgtat gatcgctaac agcaccagtt acaatacctt ttgtagaatc
     3121 ttcgtcaaat tcaactaggt tagactcagt agtaacctga ccaccacctg ggtttgtatc
     3181 ttcttcatat tcaacaacat cagcatgatg ttttgaattt tcatgtgtcg attcttcaaa
     3241 gtctacatga atagaatctt cttcagtttc aatggtacct tctgcatgac cttctgcacc
     3301 ttcaacagct gtatgatatt caaaatcaat tggcttagaa tcattacttt cttcgattgt
     3361 accagtcaat tcatgcttct ccactggcgg ctctgattta aattcaagtt cgataggagt
     3421 actatgttct ataataggtt cctttagttt atctttgccg tcgccttgag cgttattaga
     3481 gtaaaatgca acgccatttt tccaagttaa attacttgta taataatagt tataatatcc
     3541 aaaaaggtgt gtttgaaatt ctaagttgct agcatttgaa tcataatacc cttcatattt
     3601 tattacataa tttttacttt ggtctaaatt attaaagttt aaagaataac caccattagt
     3661 atcaaaatct aaactcatat tatcagtcac atcttcaaat ttgctgacat catcaagctt
     3721 tgcatatacg ctttcagcta aatcgtctga accaatgtgt ttatatacct taactgttgg
     3781 attattaacc cctggtttat ttcctttagt tacttgacca gttactgtca cagagcttaa
     3841 cgactggttg ttaggtttca tgtacgcaaa atgactaaat ttcccatcta ctttatttaa
     3901 agtatcaatt cgaccattag ctgttactcc ccaattatct ctaactccac ctaaatattg
     3961 aatattaaat attttgctaa ccgtagtctc acccaattta acttcaacat tttggttacc
     4021 tttttgcgtc actgttgtag gatcaataaa tagatttaaa gataattcag cagttaaatc
     4081 tttcttttct tgtacatatt ctttaaacgt atatctaact tttctttctc caattatttc
     4141 tcctgtcgcc ataacttgac catctgtact ttttatctcc ggaactttac gcagtgttga
     4201 gataccatga gtttcaacat tatcgcttaa tgtgaaatca aaataatctc ccgccttaat
     4261 tccttctcca aatttccatt tatatttcaa ggttactctt tctgcgttat gaggatttac
     4321 aacattcgta tcttgtttat gtcctacaat ttcactacct tcttctactt ccactttatt
     4381 tgttacatct gtacctgtcg ctttagtttc ttccactact tctttctctg caactgctgt
     4441 aacgtcagtt gatcttttca ttcttggttt aatttctgag acgttacttg gttgagctat
     4501 gtcaacttga gttcctgtag tttccttatc agcaactttt tccgatggca aatcaactcg
     4561 cgaagtttct acttttggtg cttgcacagt tttcggtgct tcttctgttg ttacttgtgt
     4621 tgattgtgat ggttgctcag ttgatgtcgc gctgtatgat tgtgtttcat ctattgtatt
     4681 aacgttattt gtagttgttt gtgtttcgct tgctttactt tcagtagctg aactcccact
     4741 ttcctctact gtagtattgt tttgttccga tgctgcagct tctttttctt gtcccattcc
     4801 aacaacgatc attgttccta agaatactga ggccgctccc aatttgtgtt ttcttatgcc
     4861 gtatctaaga ttgcttttca ctataatatt ctcccttaaa tgcaaaattc atttattttt
     4921 aaaactcaat aaatgcaatt ctatattgtt cggtttttaa aagcaatgaa aaaaagcgag
     4981 ttaataaaaa gttaagattg ttgttaactt tatgtataat gagtttttta ttatttgaaa
     5041 ctcacatata tattgcatac aaagctcttg aacaccttga tataacaggc ttgtattttt
     5101 tatacttact ttttaaatta aattcaaatt catctaattt aaaacaatat actaaaccat
     5161 acataataat cgtctgtaca atgcatcatt aacaagtcac tgaaacgcct ttcattgtat
     5221 taataacgtc actataattt ttatatcgtt cggtttttgt ttgattttaa tgattattta
     5281 tacaaaaaca gccgtatttc aagccgacat tttaaattta actaaatttg catctagtta
     5341 ataattgcat ttatcaaatt tgtcttattg atccaatcta atttgtactc acaaactagt
     5401 ttaaaattct aactttatct ctcagttcgt tatcaatcat cagacataaa ccaatgaagc
     5461 aatcagaaaa cactctaatt ttctattaga aatttgattt aatataaaaa aacaggctta
     5521 cttcatataa tttatgaaat aaacccgtca atttttgttt aattatgctt tgtgattctt
     5581 tttatttctg cgtaataatg ttaaacctag aatgctgaat aatccgccga acaacatacc
     5641 tttgtttgtt gattcttctc cacctgtttc aggtagttca gatttcttag attgtggttt
     5701 tttagttggt gccactgctt taaccttttc attgatttca ataacaggtg ttactacttt
     5761 accttgttcc actggtttag aaggcttttt aggttcttct ttggcaggtg gtactggttt
     5821 accaggttca gctgatacct ctggtgttgg cggtgttgga gtttctggct cactcggcac
     5881 ttctggtgtc ggtggtgttg gtgtttccgg ctcacttggt acttctggtg ttggtggcgt
     5941 tggtgtttcc ggctcacttg gtacttctgg tgtaggtggc gttggtggca cgattggagg
     6001 tgttgtatct tcttcaatcg tttgttgacc ttcattttgg ccgcttactt ttggaagtgt
     6061 atcttcttca aagtcaacac tattgtgtcc accgaattga taacttggtt tatctttatt
     6121 tgtatcttct tcaataattt cagtgtgctt attgaatccg tgaatatgtg gcacactgtc
     6181 gaagtcgata tcaatgatgt taccgccatg ttcatactta ggtttgtctt tttctgtatc
     6241 ttcctcgaat gactgattac ctttattttg accatgaatt tgaggtacac tatcaaaatc
     6301 gatatctacg atattgccac cttgttcata tttaggtttg tcttcttctg tgtcttcctc
     6361 gaatgactgg ttaccgctat tttggccacc ttcataacct aattcactct taatatcaac
     6421 gtggctattt tcttcgattt cttcaatcac gtcataattc ccgtgaccat tttcagttcc
     6481 taaaccagaa tgagaaatat gatgattgtt ttcagtaatt tcctcgactg gtccttgtgc
     6541 ttgaccatgc tcttcaggta attcatccac taattcaatc agattacttt cagttgtata
     6601 ttctttcgta tcttcaactg ttgtatgatc gctcactgcg ccagttacaa taccttttgt
     6661 agactcttcg tcaaattcaa ctaagttaga ctcagtagta acctgaccac cacctgggtt
     6721 tgtatcttct tcatattcaa caacatcagc gtgatgtttt gaattttcat gtgtagattc
     6781 ttcaaagtca attggatttg attcctcaga ggactcagtg tatcctccaa cgtgacctgc
     6841 ttcgctatcc acagcagtat ggtaatcgat atcaatagct gatgaatccg tttcttctat
     6901 tgtttcaatg tatccatcaa catatccacc tccaccatct atagctgtgt ggtaatcaat
     6961 gtcaagagtt gatgaatcat attcctcttc aacagtagtt actaaattct tatcatattg
     7021 acctgtaaga gtttctttaa ttgtatcttc tttatattca aatttattat tttgaataat
     7081 cggaccattt ttcccatttc cgttcgcttt attactgtat aaaactaaac cattatccca
     7141 agttaaggta tatcctctat cataataata cttataaagt tgctctggat gtcctaccat
     7201 ttgtgttcta aaatcaactt catcagtacc atttaaatac tctccatcat agtgaacaac
     7261 ataagtttta tctagatttt ctatattcaa tgaatagctt ccattatttt gtaaattcaa
     7321 attcccactc atattacttg tgacttcttt aaatttagaa gtatctgtcg tatttgcata
     7381 tacactcttc gctatgtctt cattattacc caagtattca aatatcctaa cttttggttg
     7441 atttccattc tgattactac ctttcattaa agttccagta acagtcacac ttgtcgtttt
     7501 accattatta ggtttaataa atgcaacatg cgaaaatcta ttattcgctt tattaaatgt
     7561 ctcaatcgat ccatttaaat tggcataata attcccaata ccatctttat atttaacatc
     7621 taattccttt gaagtttgtt cttcatttag tgttgaagtt atagtttgat ttccattagt
     7681 ttgtacagtt ttaggatcaa taaataaatt aatttctagt tcagccgtta catcaacctt
     7741 atcttcaata tcatttgtaa atgtatatct aatctttcca ccttctaaaa cttcacctgt
     7801 cgccattacg actgaaccat ttttaatttc tggtactttt ctagcagttg atacgccatg
     7861 cgtatttaca ttatttgata aagtaaagtc aaagtagtca ccttgatgta aaccattctc
     7921 aaatttcaac ttatatttta gtaccgctcg ttgtcctgca tgaggttcta ctttatttgt
     7981 attgttatgc ccctcaatag aaccaatttc tactgtaact ttacttgtta catctgtacc
     8041 cgtttccact ttcgcgttac tagcttcctt agcttccgct acatctgctg atcttgtcac
     8101 acgtggctta ctttctgatg ccgttcttgg ctgtgccact tcaacttgtg tttctgcgac
     8161 ttgattttgt gtagcctttt taggtgttaa atctacttgt ctttgatctc cgctattgtc
     8221 ttgagattgt gttgtttcct taacttgagg tttcgcttct tccttaacta cctcttcttt
     8281 aactgtttct atatttgctg gttgtgcagt ttgtggtgct tgtactgctt ttggtgcttc
     8341 ttcagttgtt acttgtgttg cgtttgacgg ttgttctgtt actgttgcgt tatatgattg
     8401 agtttcttct atatgattaa cgttagttgc agttgtttgt gtttcacttg ttttattatc
     8461 agtagctgaa ttcccatttt cttctactgt agttgtcttt tgttctgatg ctgcagcttc
     8521 tttgtcttgt cccatcccaa caacgatcat tgttcctaag aatactgatg ctgctcccaa
     8581 tttatgtttt ctaatgccgt acctaagatt gtttttcact ataatatctc cctttaaatg
     8641 caaaattcat taatttttta aacttaataa atgcaagtct atattgttcg gtttttaaaa
     8701 gcaatacaaa aaagcgagtt aatgaaaagt taagattgtc attaatttta tgttaattga
     8761 taattttatt atttgaaata tacctataaa ttgtattcaa gtcatcagaa acccttgtca
     8821 cacaaggctt gtatttttta tacttatttt ttaaattaaa ttcatcatta tctaatttaa
     8881 aacaatatac taaacgtttc ataattatcg cctgtacaat acgcacaaaa acatgtcttg
     8941 aaacgccttt cattactcta aaatacccaa tatacttttt atatcgttcg gattctgagt
     9001 atttcagacg attttctgca taaaaataaa cgtgtttcaa ggcaatatat tgcaattacc
     9061 taaaaacacg tttacttaat atttagttaa acaaataagc taatgaataa aatgaagatg
     9121 atacctgaaa cggaaataat cgtttctaat aatgaccatg ttaagaatgt ttcttttaca
     9181 gttaaaccaa aatattcttt aaacatccaa aatcctgcgt catttacatg agacaaaatc
     9241 acactacctg cacctatcgc aagtacaact aatgcaacat ttacatctga tgattgtaat
     9301 aatggtaaga caatacctgt agttgaaatc gcagctactg tagccgaacc taatgcgata
     9361 cgtagcacag ctgcaacaat ccatgctagt aaaatcggag acatctctgt accttcaaac
     9421 attttagcaa ttgtatttcc gacaccgccg tcaattaata cttgtttaaa tgtaccgcca
     9481 ccgccaataa tcaataacat cattccgatt ggataaatcg cattcgtcac tgattccata
     9541 atatgattca tcttacgctt tctcattaat cccatcgtaa cgattgcaaa taatactgct
     9601 attagcatgg ctgtccctgc tgttcctatc atataaatga tagattcaaa tagatttgta
     9661 ggtttgtcat gcccagttac aagttgcgtt atcgtagaca ctaacattaa tatgactggt
     9721 aatgttgctg ttaataaact cataccaaat cctggcatct cttgatccgt aaattctttt
     9781 tgtgcaccta acgctgaaat atcgccttct cgtgtatacg cagacggaat cattttttgt
     9841 gcaactttgt taaatatagg ccctgcaatg agtgtaactg gaatggcaat aatcatacca
     9901 tacagtaata catctccaac atttgccttt aattcttttg cgatgactac cggtcctgga
     9961 tgtggtggta aaaagccatg tgtcactgat aaagctgtta ccataggtag tcctagtttt
    10021 aacactgaaa catttgcgcg ttttgctact gtaaatacta atggaatcag taagactaaa
    10081 cctacttcaa agaacaatgc aataccgacg ataaatgctg caacaagcat tgcccattgt
    10141 acatgttttt gaccaaattt ttgaatcaac gtgtctgcga ttcgagttgc accaccacca
    10201 tcagcaagca atttcccaag tatggcacct aaaccgaata tcagtgcaat gtggccgagc
    10261 gtactgccca ttcctttctc aatcgtctcc ataattttag tcaatggtat acctagcatt
    10321 aacgctgtaa tcatcgatgt gataattaat gaaataaatg tatttaattt aaacccaata
    10381 attaatacta ataaaataac gatacctaaa acaacactga ttaacggcca tatttcgtta
    10441 aacatgacat tcccctcttt ctcttttcaa tagaatgtaa caccgtcgtc gcgcacgtat
    10501 tccacataat atatagtagt catggcacaa caactttatc taagatgctt gagtgacgta
    10561 tttattgtgt tttattttca gcgatatgtt ggcgttgaaa atctgcaatt tgttcataat
    10621 tctctgttaa agaacgactt aaattgataa aaatggatac gatctcttgg taaacagtga
    10681 cattttcttc aatcggcgta tgattgtttg tggcaccgac catcgatgaa acgattgaaa
    10741 aatcttcaat gtcacctaca gctttaagtc cgagcacgca ggcacctaag catgaacttt
    10801 cataactttc aggaaccact aactctgtgt caaatatatc tgacatcatt tgacgccata
    10861 cttcactttt cgcaaaacca cctgttgctt ttatcatctt aggtgtttca ttcattactt
    10921 caataagcgc aagatagacg gtatacaaat tgtaaagaac accttctaat gcagcgcgaa
    10981 tcatatgttc ttttttatga gataaagtta aaccgaagaa tgaacctctt gcatttgcgt
    11041 tccaaagcgg cgcacgttct cctgctaaat agggatggaa tattaaacca tctgcacctg
    11101 gtttaacacg ctttgcaatt tgagttaaga catcataagg atcaacaccg agacgtttcg
    11161 cagtttcgac ttcactcgct agcaactcgt cgcgcaacca tctcaatacg acaccaccat
    11221 tatttacagg acctccgatg acgtagtggt cctctgttaa gacataacaa aatattctac
    11281 ctttgtaatc agtacgcggt ttatctatca cagtacgaat cgccccagat gtaccgattg
    11341 tgacagcaac ttctccttta ccaacactat tgacacctaa attagaaagg accccatcac
    11401 tcgcaccaat aacaaacggt gtatctttat taagccccat taatgttgca taacgttctt
    11461 tcataccttt catcacatac gttgttggaa ctaattccgg caacatttcc ttggaaatac
    11521 ccagcagttc taatgcctca acatcccaat ctaatgtttc taaattaaac atccctgttg
    11581 cggaagccat tgaataatca atgatatatg tatcaaataa atgatagaaa atgtatgttt
    11641 taatatctgc aaacttagca gtacgttgaa atacatcttg ccattcatgt ttcatccaaa
    11701 aaatcttcgc taatggcgac ataggatgaa tcggtgtgcc tgttcgctgg taaatcgcat
    11761 tgccatcatg cacttcattt attactgttg catattttgc agcgcggtta tctgcccaag
    11821 taatattatt tgttaatctt tgatgttgct gatccatcgc aatcaagcta tgcatttgcg
    11881 cactaaatga cacaaactta atgtcgtctt tattaacttt ggattctctc ataacatatt
    11941 taatagtcat tagtactgca tcaaataatt catctgggtt ttcttctgag acatcaacgt
    12001 ttggtgtgtg taaatcatag cctatttgat gtttcatgat aaaagttcca ttttcatcat
    12061 ataagactga cttggtactc gtcgttccaa tgtcgacacc aatcatatat ttcatgataa
    12121 atccttcttt ctttcatttt aattcaacca aaatccttca atatctttac caacatcgtc
    12181 gaaatttaaa tgaaacgctt ctttcaaaat ttgactgtcg tattgttcca ctgcatcaat
    12241 aaacacttga tgattatgat gtatgcgttc aaaatcttgc gggttctgtt gcatacgttg
    12301 tcgcatggat gttaaaacga gtgccatcat tactggtttt aaatgactcc aaaatgagtt
    12361 taaatattga tgattagatg ctttgattaa tgtttcatga aattcaaagt catgcttcgt
    12421 aaatgattct gcatcctcaa attttactgc cactttcatc atttcaagtt gtttcttcat
    12481 ttcttttacg ataggtagtc gctcttgatt tttaactctt gaaaatgcaa atgactctaa
    12541 catcagtcgc aaatcataca tttctttctt ttcttgttcc ccaaacggca acacatgtgc
    12601 acccattctt tctaattgga tgagttgatt ttgttgcaat aatttaaatg catctcgaat
    12661 tggcgaacga ctcacattaa attgctttgc catttgattt tcagtgagta acgtaccttc
    12721 agctatgtga ccattcacaa tgcctaagcg taattctgcc gcgatacctt ctccagttgt
    12781 cataccttcc aaccatttct ctggatatcc atacatcatc aaagtcactc cttcattaca
    12841 cgacatactt gtatacaagt atgttaatat agttattatg agtttgcaag cgctttcttt
    12901 acgagcacta aaatagtgac cacccctttt cgatttaaat ttaaaggaaa tggtcactat
    12961 cacacgaatg atttaattgt tatgttgtat gtgggatatt tctaattgtt ctgtactcat
    13021 atgcgcttta ggtacttcaa tgcaataatg cgtttcatga cagtttggac attcgaatcg
    13081 acgtgttgtc gctgtatgtt tcgctttgat aactgcccac aaagatggtg agaatatatg
    13141 ctggcagtta ggacataaat aggcaacctt ttgttggtaa taaaaagtaa caccaatgcc
    13201 ataaccaatc ataaatggta aagcaattaa aaacggccat ttatttttca tcaaaattgc
    13261 acttataatg ctagaatatt gaattattcc tataatacca gcactaatcc aaatgttacg
    13321 acgaatactt ttcatttcag ctgatttact catgacatgc tctatgtctt ttaagtgtgt
    13381 gattggagac gtcgacgctt catttacgta atattgaaca tttttaattt tgtttaatac
    13441 cgcttgttgc tgtttaactt gttggttaat ttcttgttgt ttcatagtta gtaaagtatt
    13501 gagcgtcttc aaagtacctt caccttttag caacatatct atatcgctta acgcacaacc
    13561 taaatcttta agcaataaga ttaactctaa tgtttgtcgc tgttgttctg tatacacacg
    13621 acgctttcct tctgtaaatc cttgtggttt caaaatacct ttgcgatcat aatattgaat
    13681 cgttcgtgtt gtcacattgc ataattttgc gagttctcca gtcgaatagt tagacataga
    13741 ttccacctcc tataattacc atagttgatg acccgacgtc acgagcaagt acaatttcca
    13801 cattttaaag aaatttatta tactaggcgt cttattttta tgatttcgta ccatgttgat
    13861 ttacaaactc actcaaacta agtaacacac ctactaaaca tctactctgt tatttcagaa
    13921 tgaatttgtt gtaatttatc ttcaacttca gtaatctctg tcgcacattc tttcagtaaa
    13981 tctcgatact tttccgtctc tgcattgttt ttataacgta ttttatgttc taaacttgcc
    14041 cacatatcca tacctatcgt tctaatttga atttcaacag gcaatacctc aacgcgttct
    14101 gctaaaaaga ctggaataga tacaacgata tgtaaactgc ggtaaccatt ttctttaggg
    14161 tgctgaatat aatctttacg ttttatcaat tgtacgtctt cttgtttaag caacatctct
    14221 tcaatcaaat aaatatcatc taagtaatta catactacgc gaattccggc aatatccagt
    14281 atatgttctt tggcagtttc tgcgctaatc tgtaatcctt tacgattaag cttttctatt
    14341 aaactacgca tttctttcac acgtcgctcc atatgatgta taggattgtg tttataaatg
    14401 tgattgaaat tgtcatctaa aatactcagt ttagtgctta tttcctttag tgctgacgaa
    14461 taaatatgat ctaactctac gaaacctaat aacgtatcaa atgcttcatc accattttca
    14521 aatttactta aactattttt aaaatcatgt cgcaaatcct ctaaatatag tgatggtttt
    14581 cgatctacat acatttttat actaacctcc gatatataat catctttatt gtacctaaca
    14641 ttttattaag ataatactaa tacactatcg aactttgggc tgatactgaa acagcacaaa
    14701 gaaactcaaa caattcgaat tatgtatcaa aaccttcaat tacaggaagt gattttaaaa
    14761 tgatttaacg caaaaaaaca cctgttaccg ttatataggt acaagtgctt aattgataga
    14821 gatgttatac gtctttaaat gattccacaa cttttggatg tggaccatcc ataagcggtt
    14881 ctctttgtcg aacgccacca ctttggttgc caattgattc gctatcaaag tacgatttat
    14941 cttgatttga ttgttcttga atatgttctt cattatcagt tgttgcatat tcactatcca
    15001 cctctgtttt ttccattgtt gctgtatgga attgtacgaa gttctcttct tctaatgctt
    15061 tgatttcttc tttcgataac gctcgatacc aatctttcgc ttttttcgcc gcaataggaa
    15121 caacatcttt ttcaagatat ccttctttta acattgcatt cgcaatttct atcgcttttt
    15181 gccgtttaat tacttcaaat tctttccatt tttcggggta acctttcatt gtaaagggca
    15241 tttccttaac ctccaatatg ttataattca tgttatatac caccataatt ataaaacaaa
    15301 acatattaaa cacaattttt tagactcccg tcataataac ttcagacaaa cgttagtctg
    15361 acctgataaa tatttaattt taaacgttct tgtctctctc acgaaaacca ttgtgttgaa
    15421 tattcatcat tgctgattga atataattat actgtggtaa atctggtaat atctttattt
    15481 ctaattctgt atttaattcg aaatgcttag cgatgttttc aaatattgct aaatactcgc
    15541 ccattaattg ttcatttatt gtaagtctat cttcattagc catggctcta tttaacataa
    15601 agctaatttc ttctaatgcg aataagctag gataataatt ttgaatcaat gtcttatcac
    15661 taaataattc accattagct gcattataaa cttgcgtcat gttatttaat ttcacagata
    15721 ggttcatagc cgtgtttttc tgatacacat catctttata ttgattttca gaaaataaat
    15781 aatgaaagag cgttgcttct ttacgaacaa cttcagccat tacattagga agcaatgcgg
    15841 atgcggtacg ttgtccaagg acaaataaac ctatgattgc aatcacaata cccattgcaa
    15901 cgtcaataac tcttggaaac gcaatgttaa ttgttaaatt ctgtgatgct aatccgttca
    15961 ttaaaataac ttgtattgta ataaaaacta ctgcaatcgc ataatttgct cccaccaatg
    16021 cttcagtaaa caatgctgca atgcccatta aaattactgc aacaggtgtt ggtattgaaa
    16081 acaacaatat gactgaaagt actaacacac ctaaaatagt acctaaacct cgtgccatac
    16141 ctctctcgat tgcatgtata gttgatgttc ctagtaatat tgtatgtgca gataacggta
    16201 tccagtatgc tttttcaaaa tcaaacatta acgcaataaa tatcgctatc atcataatcg
    16261 ctgtatatct caatgtattt ctaaaaacaa tagagtctaa tgttaaattt tgataaatgc
    16321 gtttactata taaaggtttt cgcatgtctg cttcatacgc aatacgcgct tcatttgcat
    16381 gcaccatttc atcaattttc aatatatggt tgaataaatt ttgaaattcc tctgttactg
    16441 tcacttcttt tcgccaatat cttacatttt cctcactatt atctagttgt gcaatgatat
    16501 gatccatcat ttcaattaac tcatctggca atggtcgaat ttgtttagcg ttcaactcta
    16561 acagttcaga ataaatccct tgggcagatg tgtgtaataa taataatttt tggaaacgtc
    16621 tacttaattt atcgttactt gaagtagaag tgattaataa tttatcagat gctttaaaac
    16681 tatccaccgc tgtttttgct acttgtaaaa aagcagattt atcattataa gtgtgtaaca
    16741 acttagatat gagtttaaaa tcattttgaa ttgcttgttc ttcagctttg tttttagaaa
    16801 atacgatcgt gattaacacc atcatagtgg caagtatacc gcctactaaa atcgcaaagc
    16861 ctctatataa tgcttcttcg ggagctatag gtaagttaat gggtagactg aatgtcacaa
    16921 tgaagaatgt cgatgacggt ccagctattt ttaaggcagt aaatatataa aatggtataa
    16981 ccgtaacaat taataatgtc attccaaaaa cgagtggcgt tttggctgtt agcgtaccaa
    17041 gcatcataca tattgcaaac gctaaattac aaattattac agttcgcagc ttagatcgcg
    17101 acggaccttt aaaaacataa atatgggcta gtgttccggt tgcaactaat aatccaaatt
    17161 ggaaattacc acataagtaa ccgattattg caggaataat cattaacagt ccctgtctta
    17221 cacctttata aaagtctaag ttaagtcgat tgatttttat gagtgatgtc aaaaagatgt
    17281 catttcgact tctcctttcc ttgtcaaaat atttccataa tctttttatt agcatagtta
    17341 aaatgaattt gttgctataa attttaatta cgcaacatat gtcattataa caccttatgc
    17401 tcaattatct aaatttaaaa acttttaaag tccaattaaa attaatttct aatgttattt
    17461 aacatcgttg aacctttggt cgcccacctt tgcgctagtt aaaatttata tgtactttta
    17521 caagcgttac ctgactaatg ttttaaaacc ttatttcttt acatatatca tttcaataac
    17581 ttcattttca tcttaaacca tatctgtttt aaaaagtttc aatttcaacg caaaaaaagc
    17641 aataagcccc aactatgtga aagcttactg cttgtttaaa ttatttttct attgctttat
    17701 catcactaac aattaaaggt tgatctggtt tcacatagaa ccacataatc acagcgatta
    17761 ctgctggaac gattaacaat tggaatgtca ttgtccaacc caaatgttct acgaatagac
    17821 ctgctaatag cggactgatt aatgcaccta tattacccca taagttcatc caccctgata
    17881 ctgtaccaga gaagttacgt cctaagtcag ttgctgcagc ccaactcata cccattgaaa
    17941 taccgatacc accaagacct agtgataacc agaaaatact tacatataaa tttcctgtgc
    18001 gtacagcaaa gataattgaa actgcaaaca caataaatcc tgcaattgca attacacctc
    18061 tagctacgaa ttttgaacga cctaatccta atacacggtc agaaattgca cctgctgata
    18121 agattaagaa gaacattaat aaccaaggta atgaactaat gctcatttct ttaaagttaa
    18181 cgtggaatac ttctgttaaa tacgtcggta accaaattaa gaataatgta atgataaatt
    18241 gtacaacaaa gtattgaatt gcaattgcat agaagctaaa acgtttaaag aaatcattcc
    18301 atggtggtga tgacttttca gtagctacga tatcacgatt ttccataatg aaacgtttct
    18361 ccgcttcatt aaccattcta tgttgctcag gtaagtcttt ggcaataatc gcccataata
    18421 cagccattaa aatacctact gcaccaaaaa tgtaaaatac tgcttgccag ttaaatgcgt
    18481 taacaatagc aattgtaact attggtgcta atacaggtcc gaaatatgat cctgctaata
    18541 atgcacttga tgctctacct ttttcatttt tagagaacca aaatgaatta aacacagcat
    18601 tagaagggta cattggcgcc tcacctacac caaataagaa tctcactaaa taaattaaac
    18661 cgtggttctt aatcataccc gttaagattg taaatgcact ccaccaaact aatgcaattg
    18721 taatcatctt acgtggaccg aatttttcag ccaacatccc cgatggtact tgcattaatg
    18781 cataacctag agagaagaat gatgccaata aaccaaattg tggttttgtc atccctaaat
    18841 catccatcat ttgcttagcg atatatgaaa tgtttgctct atccatatac gcaataaccc
    18901 caataaagaa gaacgcaagc gcgaacatcc accttacgtt agttcgtttt tccttcataa
    18961 ctattcctac ttccctaatt aattttttaa aacttaccct gaaacgttaa aattttcgga
    19021 catctggcat gtccacccct actttgtcac aaaattgtac caaagttatt ttttataata
    19081 ttatcagaca cggaaagcgt ttacaataga atctataaaa attttattaa attccgctta
    19141 acttttgcta ttaaaacgat ataaaggaac tttttagtta catagtagcc tatcgtttgt
    19201 taattaaaaa tactgcaatc ctagtgtttt aaaacgtata ttgcaggctt tcttacatat
    19261 tcgacattca ttttaaattg catataacta cattaaccat tcattgtgca gcgcctgttg
    19321 tttagatgat catttattga ctttttgctc ttatagcaag caattttttg atttattgct
    19381 tataatacat tttaagacaa atgtttgttt caacatcgca tgcgacatca ttaattattc
    19441 atttgaattt atccagtttc tatttgtctg caattgctga aaattaaagg agcttatttt
    19501 taataatgga acaaattatc actgaattta ttagccgttt tgggtatgca gccattttta
    19561 tattaatttt attagaaaat gtactaccta tcgtaccatc ggaaattatt ctgacatttg
    19621 ctggtcttat gtctgttaaa tcacatttat caattttaac tttatttatt attgcaacta
    19681 tcgcatcgtt tatagggctg ttaattttat attatatctg ccgtttgatt tcagaagaac
    19741 gtctatatcg ttttattgat cgacacggta agtggattaa attgaaaagt aaggatttaa
    19801 agcgagcaaa tgattggttt aaaaagtatg gcgtatgggc tgtatttatc tgtcgtttca
    19861 tacctgtatt acgtgtattg attaccattc cagctggtgt aaaccgcatg aatgttgtga
    19921 catttaccgt tatttcatta ataggtacta caatctggaa tttcggttta attttactag
    19981 gacgcacttt gagcgatagc tttggtatgt tgatgactgg tcttcataca tattcacgta
    20041 ttatgtatgt tgtcatcatt atcgcagtca tttactttgc tatacgttac attggcaaac
    20101 gtaagagagt aaaataatat tgttgttagc ataaaggcat gaattttaaa tttctataaa
    20161 caaaaagcag tgaatcattc catctattga aatgattcac tgctttttta agtttatttg
    20221 gcatacttta gctgaaagtc aactatcttt atataaagaa atattactat taacatgata
    20281 gttatagttg tgaagtaaaa ggctaccaac ggctgagaaa tgataccaat taataatgca
    20341 ccgacagtca ttccaatata tctcacaaaa ttaaatacac ctagcacttt cccttttata
    20401 tgttcaaacc ttttagaaat tatagtagac agcaaagctg gcacaatacc aacacaagta
    20461 cctaatataa atataattac tgataatata attacatttg attcgtttaa ccatccaaac
    20521 aataacgtaa atatagcaaa tccagttata gtaacacgaa gtatcattat ttcattatat
    20581 ttttttgaaa atcgcttata aaataaactt cctaatataa cactaacagt aataggtaaa
    20641 aacaaaactc ctgatattcc aacgcctata tcataggtat tatttaataa tgttggtaaa
    20701 taaactaata ttgaaaagta cgtaaaaaat attaaaaatc ccaatgtcac taaagtaata
    20761 aacactttat cggtcaaata tttttcttca attttttcag ttaattttac aatccctttt
    20821 tcaacatttg gaatatcaat aaaaaagata atcaaaaata atacgataga tataacgagc
    20881 aaaaaactaa aaataccaat ataatcccat cttgcaccta aagtactccc taagattggt
    20941 gccaaagctg gtgcacatga taaaaatatt tgatagttcg ccatagcttg agctctacca
    21001 ttatctgtac ttagtttggc taataaagtt aaagtcacga gaggaataat tccgcaacca
    21061 attgcttgaa ataaccttga tatagcaaat aatataaagt tatgtgtcac tgcacaaata
    21121 aagctagata tgattactat tcccaatccc gttaaaagta cttttttcga atcacgagaa
    21181 tctatacttc taccaagtac aatttgcata actgcaacga taaatataaa accgccaact
    21241 gtcgcattta tccaaaatag tggtacttga aaatcgtcat atagtctcgg aataataggc
    21301 gtgtatatgt tttgaatcaa tgatgcgaaa aatgctaaaa atcctagaat atataatctg
    21361 atattactat taatcattta aacc
//
LOCUS       DALPQQ010000032        21364 bp    DNA     linear   BCT 22-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus strain K18-6-464
            SAMD00233528-rid16434743.denovo.032, whole genome shotgun sequence.
ACCESSION   DALPQQ010000032 DALPQQ010000000
VERSION     DALPQQ010000032.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMD00233528
            Sequence Read Archive: DRR236061
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 21364)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 21364)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001543423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001543423.1
            Genome Coverage       :: 77x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/22/2022 17:09:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,811
            CDSs (total)                      :: 2,743
            Genes (coding)                    :: 2,689
            CDSs (with protein)               :: 2,689
            Genes (RNA)                       :: 68
            rRNAs                             :: 2, 4, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 4, 2 (16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 54
            CDSs (without protein)            :: 54
            Pseudo Genes (ambiguous residues) :: 0 of 54
            Pseudo Genes (frameshifted)       :: 27 of 54
            Pseudo Genes (incomplete)         :: 27 of 54
            Pseudo Genes (internal stop)      :: 10 of 54
            Pseudo Genes (multiple problems)  :: 10 of 54
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..21364
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMD00233528-rid16434743.denovo.032"
                     /strain="K18-6-464"
                     /db_xref="taxon:1280"
                     /geo_loc_name="Japan: Niigata"
     gene            165..2771
                     /gene="yfhO"
                     /locus_tag="O7798_001046"
     CDS             165..2771
                     /gene="yfhO"
                     /locus_tag="O7798_001046"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499750.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoteichoic acid-specific glycosyltransferase
                     YfhO"
                     /protein_id="HDC2863313.1"
                     /translation="MLKKWLNSNVKQFFVITFISVILTLILFSTHIYDYIVNGTVFSG
                     AGDGFRQMMPFQMYLYEHLRSFSSLYDASFGLGGDYMKGLSYYYSLSPLMWLNFLFIK
                     IGETVGIFNPTTIHFWPTNQLIMAMIRAIITFVVTFYLFKILHFKRSANMIATILYGM
                     STVVIYFNFTWSFYGNLLYLLPLSILGLERYFQQRKIGIFIVAIALTLFSNFYFSYYQ
                     AIIIGCYYLYRLIFTYKYDIVSRTQKLICVISATVLSVLSSVFGLFTGISAFLENDRK
                     QNPNVDIPFLTPLDYHYFFFSDGFYITISILTIVALLSFKLYRFYFYRLFAIVTWILF
                     IGSLSQYFDSAFNGFSFPERRWVYILALSSSALCGLFIQHLSTLNMKYYLIRTIPVCI
                     IAILYVLLSPTHPLALIVGIILLIVLAVILKFSLWRYKKLTVAILVLIVMIQQIVILD
                     NNKNMAIKPYQQSLSTLKQHDYHSNYVNQLIKKINQNATGSFNRIDYMSDYALNSPFI
                     YHYNGISLYSSIFNGDILKYYDKTLQINMPIDKNSTYRLLGNRQNLLSLWNVNDRIRV
                     NHDDNLPYGFKIKSEHKDNKVRWIHSKNTIHYPSAHITNKVFSNKELKSPLDKEQAML
                     QGIVSNNIKDVNTHFKANKNLLSDSTIKLNSAAWQSPTKHLLQVKQNNGGLTVQLPKS
                     VSNQFKDLYFEMDLELLSPDKAHDVKVNEYTQERNKLTYKYRRVVTPVTIRIKAPDRI
                     RLSLPKGKYRVNLKGIYGEDYTTLKDASNSLEAVKVSKTKHGYTITKNKNSSGYIVLP
                     TAYNQGMKATSGDQSLKVEQVNGVMTGIKAPKNITKIQLSYTPPYYYLLITITIFGII
                     CSIIFTRWARQK"
     gene            complement(3015..3365)
                     /gene="rplS"
                     /locus_tag="O7798_001047"
     CDS             complement(3015..3365)
                     /gene="rplS"
                     /locus_tag="O7798_001047"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011303276.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L19"
                     /protein_id="HDC2863314.1"
                     /translation="MTNHKLIEAVTKSQLRTDLPSFRPGDTLRVHVRIIEGTRERIQV
                     FEGVVIKRRGGGVSETFTVRKISSGVGVERTFPLHTPKIEKIEVKRRGKVRRAKLYYL
                     RSLRGKAARIQEIR"
     gene            complement(3468..4205)
                     /gene="trmD"
                     /locus_tag="O7798_001048"
     CDS             complement(3468..4205)
                     /gene="trmD"
                     /locus_tag="O7798_001048"
                     /EC_number="2.1.1.228"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499747.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA (guanosine(37)-N1)-methyltransferase TrmD"
                     /protein_id="HDC2863315.1"
                     /translation="MKIDYLTLFPEMFDGVLNHSIMKRAQENNKLQINTVNFRDYAIN
                     KHNQVDDYPYGGGQGMVLKPEPVFNAMEDLDVTEQTRVILMCPQGEPFSHQKAVELSK
                     ADHIVFICGHYEGYDERIRTHLVTDEISMGDYVLTGGELPAMTMTDAIVRLIPGVLGN
                     EQSHQDDSFSDGLLEFPQYTRPREFKGLTVPDVLLSGNHANIDAWRHEQKLIRTYNKR
                     PDLIEKYPLTNADKQILERYKIGLKKG"
     gene            complement(4205..4708)
                     /gene="rimM"
                     /locus_tag="O7798_001049"
     CDS             complement(4205..4708)
                     /gene="rimM"
                     /locus_tag="O7798_001049"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499746.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome maturation factor RimM"
                     /protein_id="HDC2863316.1"
                     /translation="MRVEVGQIVNTHGIKGEIKVKSNSDFTDVRFQPGQVLTVVHNNN
                     DLEYTVKSHRVHKGLHMLTFEGINNINDIEHLKGSSIYQERDHEDIVLEENEFYYSDI
                     IGCTVFDDQETPIGRVINIFETGANDVWVIKGSKEYLIPYIADVVKEVDVENKKIIIT
                     PMEGLLD"
     gene            complement(4896..5171)
                     /gene="rpsP"
                     /locus_tag="O7798_001050"
     CDS             complement(4896..5171)
                     /gene="rpsP"
                     /locus_tag="O7798_001050"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499745.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S16"
                     /protein_id="HDC2863317.1"
                     /translation="MAVKIRLTRLGSKRNPFYRIVVADARSPRDGRIIEQIGTYNPTS
                     ANAPEIKVDEALALKWLNDGAKPTDTVHNILSKEGIMKKFDEQKKAK"
     gene            complement(5606..6973)
                     /gene="ffh"
                     /locus_tag="O7798_001051"
     CDS             complement(5606..6973)
                     /gene="ffh"
                     /locus_tag="O7798_001051"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002457378.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="signal recognition particle protein"
                     /protein_id="HDC2863318.1"
                     /translation="MAFEGLSERLQATMQKMRGKGKLTEADIKIMMREVRLALLEADV
                     NFKVVKEFIKTVSERALGSDVMQSLTPGQQVIKIVQDELTQLMGGENTSINMSNKPPT
                     VVMMVGLQGAGKTTTAGKLALLMRKKYNKKPMLVAADIYRPAAINQLQTVGKQIDIPV
                     YSEGDQVKPQQIVTNALKHAKEEHLDFVIIDTAGRLHIDEALMNELKEVKDIAKPNEI
                     MLVVDSMTGQDAVNVAESFDDQLDVTGVTLTKLDGDTRGGAALSIRSVTQKPIKFVGM
                     SEKLDGLELFHPERMASRILGMGDVLSLIEKAQQDVDQEKAKDLEKKMRESSFTLDDF
                     LEQLDQVKNLGPLDDIMKMIPGMNKMKGLDKLNMSEKQIDHIKAIIQSMTPAERNNPD
                     TLNVSRKKRIAKGSGRSLQEVNRLMKQFNDMKKMMKQFTGGGKGKKGKRNQMQNMLKG
                     MNLPF"
     gene            complement(6999..7331)
                     /locus_tag="O7798_001052"
     CDS             complement(6999..7331)
                     /locus_tag="O7798_001052"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499743.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="putative DNA-binding protein"
                     /protein_id="HDC2863319.1"
                     /translation="MGQNDLVKTLRMNYLFDFYQSLLTNKQRNYLELFYLEDYSLSEI
                     ADTFNVSRQAVYDNIRRTGDLVEDYEKKLELYQKFEQRREIYDEMKQHLSNPEQIQRY
                     IQQLEDLE"
     gene            complement(7318..8568)
                     /gene="ftsY"
                     /locus_tag="O7798_001053"
     CDS             complement(7318..8568)
                     /gene="ftsY"
                     /locus_tag="O7798_001053"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499742.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="signal recognition particle-docking protein
                     FtsY"
                     /protein_id="HDC2863320.1"
                     /translation="MSFFKRLKDKFATNKENEEVKSLTEEQGQDKLEDTHSEGSTQDA
                     NDLAENAEVKKKPRKLSEADFDDDGLISIEDFEEIEAQKMGAKFKAGLEKSRQNFQEQ
                     LNNLIARYRKVDEDFFEALEEMLITADVGFNTVMTLTEELRMEAQRRNIQDTEDLREV
                     IVEKIVEIYHQEDDNSEAMNLEDGRLNVILMVGVNGVGKTTTIGKLAYRYKMEGKKVM
                     LAAGDTFRAGAIDQLKVWGERVGVDVISQSEGSDPAAVMYDAINAAKNKGVDILICDT
                     AGRLQNKTNLMQELEKVKRVINRAVPDAPHEALLCLDATTGQNALSQARNFKEVTNVT
                     GIVLTKLDGTAKGGIVLAIRNELHIPVKYVGLGEQLDDLQPFNPESYVYGLFADMIEQ
                     NEEITTVENDQIVTEEKDDNHGSK"
     gene            complement(8568..12134)
                     /gene="smc"
                     /locus_tag="O7798_001054"
     CDS             complement(8568..12134)
                     /gene="smc"
                     /locus_tag="O7798_001054"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499741.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chromosome segregation protein SMC"
                     /protein_id="HDC2863321.1"
                     /translation="MVYLKSIDAIGFKSFADQTNVQFDKGVTAIVGPNGSGKSNITDA
                     IKWVLGEQSAKSLRGSKMEDIIFSGAEHRKAQNYAEVQLRLDNHSKKLSVDENEVIVT
                     RRLYRSGESEYYINNDRARLKDIADLFLDSGLGKEAYSIISQGRVDEILNAKPIDRRQ
                     IIEESAGVLKYKKRKAESLNKLDQTEDNLTRVEDILYDLEGRVEPLKEEAAIAKEYKT
                     LSHQMKHSDIVVTVHDIDQYTNDNRQLDQRLNDLQGQQANKEADKQRLSQQIQQYKGK
                     RHQLDNDVESLNYQLVKATEAFEKYTGQLNVLEERKKNQSETNARYEEEQENLMELLE
                     NISNEISEAQDTYKSLKSKQKELNAVIRELEEQLYVSDEAHDEKLEEIKNEYYTLMSE
                     QSDVNNDIRFLKHTIEENEAKKSRLDSRLVEVFEQLKDIQGQIKTTKKEYQQTNKELS
                     AVDKEIKNIEKDLTDTKKAQNEYEEKLYQAYRYTEKMKTRIDSLATQEEEYTYFFNGV
                     KHILKAKNKELKGIYGAVAEIIDVPSKLTQAIETALGASLQHVIVDSEKDGRQAIQFL
                     KERNLGRATFLPLNVIQSRVVATDIKSIAKEANGFISIASEAVKVAPEYQNIIGNLLG
                     NTIIVDHLKHANELARAIKYRTRIVTLEGDIVNPGGSMTGGGARKSKSILSQKDELTT
                     MRHQLEDYLRQTESFEQQFKELKIKSDQLSELYFEKSQKHNTLKEQVHHFEMELDRLT
                     TQETQIKNDHEEFEFEKNDGYTSDKSRQTLSEKETYLESIKASLKRLEDEIERYTKLS
                     KEGKESVTKTQQTLHQKQSDLAVVKERIKTQQQTIDRLNNQNQQTKHQLKDVKEKIAF
                     FNSDEVMGEQAFQNIKDQINGQQETRTRLSDELDKLKQQRIELNEQIDAQEAKLQVCH
                     QDILAIENHYQDIKAEQSKLDVLIHHAIDHLNDEYQLTVERAKSEYTSDESIDALRKK
                     VKLMKMSIDELGPVNLNAIEQFEELNERYTFLSEQRTDLRKAKETLEQIISEMDQEVT
                     ERFKETFHAIQGHFTAVFKQLFGGGDAELQLTEADYLTAGIDIVVQPPGKKLQHLSLL
                     SGGERALTAIALLFAILKVRSAPFVILDEVEAALDEANVIRYAKYLNELSDETQFIVI
                     THRKGTMEFADRLYGVTMQESGVTKLVSVNLNTIDDVLKEEQ"
     gene            complement(12281..13012)
                     /locus_tag="O7798_001055"
     CDS             complement(12281..13012)
                     /locus_tag="O7798_001055"
                     /EC_number="3.1.26.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499740.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease III"
                     /protein_id="HDC2863322.1"
                     /translation="MSKQKKSEIVNRFRKRFDTKMTELGFTYQNIDLYQQAFSHSSFI
                     NDFNMNRLDHNERLEFLGDAVLELTVSRYLFDKHPNLPEGNLTKMRATIVCEPSLVIF
                     ANKIGLNEMILLGKGEEKTGGRTRPSLISDAFEAFIGALYLDQGLDIVWKFAEKVIFP
                     HVEQNELLGVVDFKTQFQEYVHQQNKGDVTYNLIKEEGPAHHRLFTSEVILQGEAIAE
                     GKGKTKKESEQRAAESAYKQLKQIK"
     gene            complement(13128..13361)
                     /locus_tag="O7798_001056"
     CDS             complement(13128..13361)
                     /locus_tag="O7798_001056"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002510960.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl carrier protein"
                     /protein_id="HDC2863323.1"
                     /translation="MENFDKVKDIIVDRLGVDADKVTEDASFKDDLGADSLDIAELVM
                     ELEDEFGTEIPDEEAEKINTVGDAVKFINSLEK"
     gene            complement(13604..14338)
                     /gene="fabG"
                     /locus_tag="O7798_001057"
     CDS             complement(13604..14338)
                     /gene="fabG"
                     /locus_tag="O7798_001057"
                     /EC_number="1.1.1.100"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499737.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-oxoacyl-[acyl-carrier-protein] reductase"
                     /protein_id="HDC2863324.1"
                     /translation="MTKSALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVV
                     EEIKAKGVDSFAIQANVADADEVKAMIKEVVSQFGSLDVLVNNAGITRDNLLMRMKEQ
                     EWDDVIDTNLKGVFNCIQKATPQMLRQRSGAIINLSSVVGAVGNPGQANYVATKAGVI
                     GLTKSAARELASRGITVNAVAPGFIVSDMTDALSDELKEQMLTQIPLARFGQDTDIAN
                     TVAFLASDKAKYITGQTIHVNGGMYM"
     gene            complement(14331..15257)
                     /gene="fabD"
                     /locus_tag="O7798_001058"
     CDS             complement(14331..15257)
                     /gene="fabD"
                     /locus_tag="O7798_001058"
                     /EC_number="2.3.1.39"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499736.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ACP S-malonyltransferase"
                     /protein_id="HDC2863325.1"
                     /translation="MSKTAIIFPGQGAQKVGMAQDLFNNNDQATEILTSAANTLDFDI
                     LETMFTDEEGKLGETENTQPALLTHSSALLAALKNLNPDFTMGHSLGEYSSLVAADVL
                     SFEDAVKIVRKRGQLMAQAFPTGVGSMAAVLGLDFDKVDEICKSLSSDDKIIEPANIN
                     CPGQIVVSGHKALIDELVEKGKSLGAKRVMPLAVSGPFHSSLMKVIEEDFSSYINQFE
                     WRDAKFPVVQNVNAQGETDKEVIKSNMVKQLYSPVQFINSTEWLIDQGVDHFIEIGPG
                     KVLSGLIKKINRDVKLTSIQTLEDVKGWNEND"
     gene            complement(15250..16236)
                     /gene="plsX"
                     /locus_tag="O7798_001059"
     CDS             complement(15250..16236)
                     /gene="plsX"
                     /locus_tag="O7798_001059"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499735.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate acyltransferase PlsX"
                     /protein_id="HDC2863326.1"
                     /translation="MVKLAIDMMGGDNAPDIVLEAVQKAVEDFKDLEIILFGDEKKYN
                     LNHERIEFRHCSEKIEMEDEPVRAIKRKKDSSMVKMAEAVKSGEADGCVSAGNTGALM
                     SAGLFIVGRIKGVARPALVVTLPTIDGKGFVFLDVGANADAKPEHLLQYAQLGDIYAQ
                     KIRGIDNPKISLLNIGTEPAKGNSLTKKSYELLNHDHSLNFVGNIEAKTLMDGDTDVV
                     VTDGYTGNMVLKNLEGTAKSIGKMLKDTIMSSTKNKLAGAILKKDLAEFAKKMDYSEY
                     GGSVLLGLEGTVVKAHGSSNAKAFYSAIRQAKIAGEQNIVQTMKETVGESNE"
     gene            complement(16241..16813)
                     /gene="fapR"
                     /locus_tag="O7798_001060"
     CDS             complement(16241..16813)
                     /gene="fapR"
                     /locus_tag="O7798_001060"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499734.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcription factor FapR"
                     /protein_id="HDC2863327.1"
                     /translation="MRGETLKLKKDKRREAIRQQIDSNPFITDHELSDLFQVSIQTIR
                     LDRTYLNIPELRKRIKLVAEKNYDQISSIEEQEFIGDLIQVNPNVKAQSILDITSDSV
                     FHKTGIARGHVLFAQANSLCVALIKQPTVLTHESSIQFIEKVKLNDTVRAEARVVNQT
                     AKHYYVEVKSYVKHTLVFKGNFKMFYDKRG"
     gene            complement(17016..19076)
                     /gene="recG"
                     /locus_tag="O7798_001061"
     CDS             complement(17016..19076)
                     /gene="recG"
                     /locus_tag="O7798_001061"
                     /EC_number="3.6.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499733.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent DNA helicase RecG"
                     /protein_id="HDC2863328.1"
                     /translation="MAKVNLIESPYSLLQLKGIGPKKIEVLQQLNIHTVEDLVLYLPT
                     RYEDNTVIDLNQAEDQSNVTIEGQVYTAPVVAFFGRNKSKLTVHLMVNNIAVKCIFFN
                     QPYLKKKIELNQTITVKGKWNRVKQEITGNRVFFNSQGTQTQENADVQLEPVYRIKEG
                     IKQKQIRDQIRQALNDVTIHEWLTDELREKYKLETLDFTLNTLHHPKSKEDLLRARRT
                     YAFTELFLFELRMQWLNRLEKSSDEAIEIDYDIDQVKSFIDRLPFELTEAQKSSVNEI
                     FRDLKAPIRMHRLLQGDVGSGKTVVAAICMYALKTAGYQSALMVPTEILAEQHAESLM
                     ALFGDSMNVALLTGSVKGKKRKILLEQLENGTIDCLIGTHALIQDDVIFHNVGLVITD
                     EQHRFGVNQRQLLREKGAMTNVLFMTATPIPRTLAISVFGEMDVSSIKQLPKGRKPII
                     TTWAKHEQYDKVLMQMTSELKKGRQAYVICPLIESSEHLEDVQNVVALYESLQQYYGV
                     SRVGLLHGKLSADEKDEVMQKFSNHEINVLVSTTVVEVGVNVPNATFMMIYDADRFGL
                     STLHQLRGRVGRSDQQSYCVLIASPKTETGIERMTIMTQTTDGFELSERDLEMRGPGD
                     FFGVKQSGLPDFLVANLVEDYRMLEVARDEAAELIQSGVFFENTYQHLRHFVEENLLH
                     RSFD"
     gene            complement(19266..20912)
                     /gene="fakA"
                     /locus_tag="O7798_001062"
     CDS             complement(19266..20912)
                     /gene="fakA"
                     /locus_tag="O7798_001062"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499732.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fatty acid kinase catalytic subunit FakA"
                     /protein_id="HDC2863329.1"
                     /translation="MISKINGKLFADMIIQGAQNLSNNADLVDSLNVYPVPDGDTGTN
                     MNLTMTSGREEVENNLSKNIGELGKTFSKGLLMGARGNSGVILSQLFRGFCKNIESES
                     EINSKLLAESFQAGVETAYKAVMKPVEGTILTVAKDAAQAAIEKANNTEDCIELMEYI
                     IVKANESLENTPNLLAVLKEVGVVDSGGKGLLCVYEGFLKALKGEKVEAKVAKIDKDE
                     FVHDEHDFHGVINTEDIIYGYCTEMMVRFGKNKKAFDEQEFRQDMSQFGDSLLVINDE
                     EIVKVHVHTEYPGKVFNYGQQYGELIKLKVENMREQHREVIRKEQHTAKPKMETVETA
                     IITISMGEGISEIFKSMGATHIISGGQTMNPSTEDIVKVIEQSKCKRAIILPNNKNIL
                     MASEQAASIVDAEAVVIPTKSIPQGISALFQYDVDATLEENKAQMADSVNNVKSGSLT
                     YAVRDTKIDGVEIKKDAFMGLIEDKIVSSQSDQLTTVTELLNEMLAEDSEILTVIIGQ
                     DAEQAVTDNMINWIEEQYPDVEVEVHEGGQPIYQYFFSVE"
     gene            complement(20927..21301)
                     /locus_tag="O7798_001063"
     CDS             complement(20927..21301)
                     /locus_tag="O7798_001063"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499731.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Asp23/Gls24 family envelope stress response
                     protein"
                     /protein_id="HDC2863330.1"
                     /translation="MTLEISNDYGKIDISNEVIASVVGGKAVECYGIVGMASRQQVRD
                     GIAEILGHENYAKGIKVTENNGVVDIDMYIIVSYGVKISEVANNVQSTVKYTLEKSLN
                     VSVNSINIYVQGVRVNNTGKKA"
BASE COUNT         6439 a         4144 c         2872 g         7909 t
ORIGIN      
        1 tattcaatat atttgtttaa tgataaactg aaaatgatcc aaagtttaag taactatgat
       61 aaggtatctg ttccacagtc atcttcgtct ttacctatca agaacctcat taactttagt
      121 ttcagttaaa cttaatttta aatttgaaag ttgaggataa tgttgtgtta aaaaagtggc
      181 taaattcaaa cgtcaaacaa ttctttgtta taactttcat tagtgtaata ttaacgctta
      241 ttttattttc tactcatatc tatgattata ttgtgaatgg tactgttttt agcggggctg
      301 gagatggatt ccgtcaaatg atgccatttc aaatgtattt gtatgaacat ctacgtagtt
      361 tttctagttt atatgatgca tcgtttggat taggtggcga ttatatgaaa ggactatcat
      421 attattattc gctgtcacct ttaatgtggc taaattttct attcattaaa ataggagaaa
      481 cggttggtat atttaatccg acgacaatac atttttggcc gacaaaccaa cttattatgg
      541 ctatgatacg agctatcata acatttgtcg tgaccttcta cttatttaaa atattacact
      601 ttaaacgctc agcaaatatg atcgctacga ttttatacgg catgtcaact gtcgttatat
      661 actttaattt tacttggtca ttttatggaa atttattata tttattgcca ttatcgattc
      721 ttggtttgga aagatatttt caacaacgca aaatcggtat tttcattgtt gcgatagcct
      781 taacactatt tagcaatttt tatttcagtt attatcaagc tattattata ggttgctact
      841 atttatatcg actcattttc acttacaaat atgacattgt ctctagaaca caaaaattaa
      901 tttgcgtcat atctgctaca gttttgagtg tgttatcaag tgtatttggt ttattcactg
      961 gcatttctgc gtttttggaa aatgacagaa agcaaaatcc caatgttgat ataccgtttt
     1021 tgacaccact tgattatcat tattttttct ttagcgatgg attttatatt acgatttcaa
     1081 ttcttactat cgttgcatta ttgtcattca aactgtatcg tttttacttt tatagacttt
     1141 tcgcaatagt aacatggata ttatttatag gttcattatc acagtatttc gacagtgctt
     1201 ttaatggttt ttcatttcca gaaaggcgtt gggtgtatat cttagcacta tcatcaagtg
     1261 ctctttgcgg attgtttatt caacatttat caacattaaa tatgaaatat tatttaatca
     1321 gaacaatacc cgtatgcatc atcgcaatac tttatgtatt actatcaccg acacacccac
     1381 ttgcacttat agtaggtatt atcctgctaa tagtgcttgc cgttatttta aaatttagtt
     1441 tatggcgtta taaaaaatta accgttgcaa tattagtatt aatcgttatg attcaacaaa
     1501 tcgtcatttt agataacaac aaaaacatgg caatcaaacc ttatcaacaa tcattatcaa
     1561 cgttgaaaca acatgattac catagtaact atgtaaacca gcttataaaa aagataaatc
     1621 aaaatgcaac aggctcattt aatcgcattg attatatgtc agactatgca ttaaattcac
     1681 catttatata tcattataat ggcatttcat tatattctag tatttttaat ggagacattt
     1741 taaaatatta tgacaagaca ctccaaatta atatgccaat cgataaaaac agcacttata
     1801 gattacttgg caatcgtcaa aatttactat cactttggaa tgttaatgat cgaattagag
     1861 tgaatcatga tgacaactta ccatatggat ttaaaattaa gtctgaacac aaagacaata
     1921 aagttcgttg gattcattct aaaaatacca tccattatcc aagtgcacat attacaaata
     1981 aggtcttttc caataaagaa ttaaaatctc cattagataa agaacaagca atgttgcaag
     2041 ggattgtttc taacaatatt aaagatgtta atacacattt taaagccaat aaaaatttac
     2101 tatcagattc aacaattaaa ttaaatagtg cagcctggca atctcctaca aaacatttat
     2161 tacaagttaa acaaaataat ggtggtctaa ctgtacagtt gccaaaatca gtttctaatc
     2221 aatttaaaga tttgtatttt gaaatggatt tagaattact ttcgccggat aaagctcatg
     2281 atgttaaagt gaatgaatat acacaagaaa gaaataaact cacttataaa tatcgacgcg
     2341 ttgtaacacc cgtaacgata cgcattaaag ctccagatag aattagatta tcattgccta
     2401 aaggtaagta tcgagtaaat ttaaaaggga tatacggcga agattatacc acgcttaaag
     2461 acgcttcaaa ttcattagaa gctgtcaaag ttagtaagac aaagcatggt tatactatta
     2521 ctaaaaataa aaattcatct gggtatattg ttttgccaac agcatataat caaggtatga
     2581 aagcgacatc aggtgatcaa agtcttaaag ttgaacaagt aaatggtgtt atgaccggca
     2641 ttaaagcacc taaaaatata acaaagattc aattgagcta taccccacca tactattatt
     2701 tacttataac aattactata tttggcatta tatgtagtat tattttcacg agatgggcaa
     2761 gacaaaaata atgttgctac gcatatattt aataaatcta ctaagtcctt ttcaatggca
     2821 cttagtagat ttttgtttat ataaccattt tgagcaaaca cgttatgaat agagaaggaa
     2881 taaacaatta cattatcaac tttacattaa ctaaacagca aaaaaagcca tctatatcac
     2941 tccataaaag tgacctagat ggctttattg tttgagtcga atttgactca tacatagctt
     3001 tgtttaaatg ctgattaacg aatttcttgg attctagcag ctttaccacg taaactacgt
     3061 aagtaatata atttagcacg acgtacttta ccacgacgtt taacttcgat tttttcaatt
     3121 tttggtgtgt gtaatgggaa tgtacgttcc acgccaacac ctgatgaaat tttacgaact
     3181 gtaaacgttt cagaaacgcc accgccacga cgtttaatta caacgccttc gaatacttgg
     3241 atacgctcac gagtaccctc aatgatacgt acgtgtacac gtaaagtatc accaggacgg
     3301 aaacttggta agtctgtacg taattgtgat ttagttactg cttcgattaa tttgtgattt
     3361 gtcattataa attctcctct tcaacctatg ttcttgcctc gacaaatata tagcagcgga
     3421 tcatagtgat tttagtgttt ccacactcag attatgttag cacaatacta accttttttc
     3481 aatcctattt tatatctttc taatatttgc ttatctgcat tagttaatgg atatttttca
     3541 attaagtcag gtcttttatt atatgtgcgg atcaactttt gctcatgtct ccatgcatca
     3601 atattggcat gatttccaga caataaaaca tctggaactg ttagaccctt aaattcacgc
     3661 ggacgtgtat attgcggaaa ctctaataac ccatctgaaa atgaatcgtc ttgatgtgac
     3721 tgttcattac ctaaaacacc tggaatcagt ctaacaatag catcagtcat ggtcatcgct
     3781 ggcaattctc caccagttaa aacatagtca cccattgata tttcatctgt gacaagatgt
     3841 gttcggatac gttcatcgta accttcataa tgtccgcata tgaaaacgat gtggtcggcc
     3901 ttgcttaatt caacagcttt ctgatgtgaa aatggctcgc cttgtggaca cattaaaata
     3961 acgcgtgttt gttctgtgac atctaagtct tccatcgcat taaaaacagg ttcaggcttt
     4021 aacaccatac cttgtccgcc accatacgga taatcatcta cttggttgtg cttgttaatt
     4081 gcataatctc taaaattaac cgtattgatt tgtaatttat tgttttcttg ggcacgtttc
     4141 ataattgaat gatttaaaac accatcaaac atttcaggaa ataaagttaa ataatcaatt
     4201 ttcattaatc caacaatcct tccattggcg tgatgataat ttttttattt tcaacatcca
     4261 cttcttttac aacatcagca atataaggaa tcaaatattc tttagatcct ttaatcaccc
     4321 acacatcatt cgcacctgtt tcaaatatat taattacacg acctattggt gtttcttgat
     4381 catcaaaaac tgtacatcct ataatatctg aataataaaa ttcattttcc tcaagtacga
     4441 tatcttcatg atcacgctct tgataaatag aactcccttt taaatgctca atatcattaa
     4501 tattattaat accttcaaat gtaagcatat gaagcccttt atgcactcta tgtgacttaa
     4561 cagtatattc aaggtcgtta ttgttatgca caactgtcag cacttgaccg ggttgaaaac
     4621 gaacgtctgt aaagtctgaa ttggatttta ctttaatttc acctttaata ccatgtgtgt
     4681 taacaatttg accaacttca actctcattc tattacctcc aactctatgc tttgaacact
     4741 tctattttaa ttgaaaataa ttcaaagaaa aagggcacca ttatggtacc caatacgttc
     4801 tatattacta acatgtgata ttcccaacgt atcattgagt aataactgtc agtgtaaacg
     4861 agttattctt attgttagaa caattttacg ctaaattact tagctttctt ttgttcgtca
     4921 aattttttca taataccttc ttttgataag atattgtgaa ctgtatcagt tggtttcgca
     4981 ccatcattta accattttaa agctaacgct tcgtcaactt taatttctgg agcattagcg
     5041 ctcgttgggt tataagtacc gatttgttcg atgatacgtc cgtcacgtgg agaacgagca
     5101 tctgctacta cgatacgata gaatggattt ctttttgaac ctaaacgtgt taaacgaatt
     5161 ttaactgcca tttataaaat ctcctttaag tcatgtttta atttttattt tctacaagaa
     5221 ataatattaa caggtgtatg aatgtttgta aagagttttt tctttaccag gaaaattatt
     5281 gaaccttttt cttacaataa taactatgtg attactaaat tagactgtta ataggttata
     5341 aaaattcata gtaaatttca ccacctacgt gttaagttaa tttatctcgt aaggacatga
     5401 atggtaccac ttctaccgca cacgttcccc caatataact tattaatatt agcaacaata
     5461 acctcatgtt ctagcaaatc agcaatttca gtttttaatt attattgtgt atctaaaaat
     5521 atgcacccca taaagttata ttctttagta taactttcgg gatgcacatc tcattgcaac
     5581 aaaaatcagc gtgttatatt aaacattaaa acggtaaatt catacctttt aacatatttt
     5641 gcatttgatt gcgtttacct tttttacctt taccgccacc agtgaactgt ttcatcattt
     5701 tcttcatatc gttaaattgt ttcatcaaac gattgacttc ttgtaatgaa cgaccagacc
     5761 ctttagcaat acgcttttta cgtgatacat tcaatgtgtc tggattgttt ctttcagccg
     5821 gcgtcattga ctggataatc gctttaatat gatcaatttg cttttcactc atattaagct
     5881 tatctagccc tttcatttta ttcatacctg gaatcatttt cataatatca tccagtggtc
     5941 ctagattttt cacctgatca agttgttcta aaaaatcatc taaagtaaac gatgactcac
     6001 gcatcttttt ctctaaatct tttgcttttt cttgatccac atcttgttgc gctttttcaa
     6061 ttaaacttaa cacatcaccc atacctaaaa tacgtgatgc catacgttca ggatggaata
     6121 gctctaaacc atctaacttt tcactcatac caacaaattt aattggtttt tgtgtcaccg
     6181 aacgaataga taaagctgca ccaccacgtg tatcaccatc taatttagtt aaggtaacac
     6241 ctgtgacatc aagttgatcg tcaaaagatt ctgcaacatt gacagcatct tgacccgtca
     6301 ttgaatcgac aactaacata atttcgtttg gtttagcaat gtcttttact tcttttaatt
     6361 cgttcatcaa tgcttcatcg atgtgtaatc gacctgctgt atcaatgatt acaaagtcta
     6421 aatgttcttc tttagcatgt tttaatgcat tagttacaat ttgttgtggc tttacttgat
     6481 ctccttcact gtatacagga atatcaattt gtttccctac tgtttgtaat tgatttatcg
     6541 ctgctggacg ataaatatct gctgcaacta acataggttt tttgttgtat tttttacgca
     6601 tcaataatgc taatttacct gcagttgttg ttttaccagc accttgtaaa ccaaccatca
     6661 taacaacagt aggtggttta tttgacatat taatcgacgt attttctcca cccatcaact
     6721 gcgttaattc atcttgaact attttaataa cttgttgccc tggtgttaat gattgcatta
     6781 catcggaacc taatgcgcgt tctgatactg ttttaataaa ttcttttacc actttaaagt
     6841 ttacgtcagc ctcaagtaac gctaatctta cttcacgcat cattatcttt atatcagctt
     6901 cagtaagttt acccttacca cgcatttttt gcatcgtcgc ttgcaagcgt tctgataacc
     6961 cttcaaatgc catatcgatg tcctccctca atttatatct attctaagtc ttctaattgt
     7021 tgaatataac gttgtatttg ttctggatta cttaaatgtt gtttcatttc atcatatatt
     7081 tctcggcgtt gctcaaattt ctggtataat tccaatttct tttcataatc ttcaactaaa
     7141 tcgccagttc ttcttatatt atcataaact gcttgtctac tcacattaaa agtatctgcg
     7201 atttcactta aagaataatc ttcaagataa aataattcca aataattacg ttgtttattc
     7261 gtcaataagg attgataaaa atcaaacaaa taattcattc gtaacgtttt aactaaatca
     7321 ttttgaccca tgattatcgt ccttttcttc tgttacaatt tgatcatttt caactgttgt
     7381 tatttcttca ttttgttcaa tcatatcagc gaataagccg tagacataac tttcagggtt
     7441 aaatggttgt aagtcatcta attgctcacc taaacctaca tatttaactg ggatgtgcaa
     7501 ttcattacga atggctaata cgataccacc tttggctgta ccatctaatt tcgttaatac
     7561 aatacctgta acatttgtta cttctttaaa gtttctagct tgtgacaacg cattctgacc
     7621 agttgtagca tctaaacata gtaatgcttc atgaggcgca tctggcactg ctcgattaat
     7681 tacacgctta actttttcta attcttgcat tagatttgtt ttattttgta aacgtccagc
     7741 ggtatcacag attaaaatat caacaccttt gtttttagcg gcattaatcg catcatacat
     7801 aacagcagct ggatcagaac cttcactttg gctaattacg tctacaccaa cacgttcgcc
     7861 ccaaactttc aattgatcaa tagcacccgc tctaaaagta tcgcccgcag ctaacattac
     7921 ttttttacct tccattttat atcggtaagc taattttcca attgttgttg ttttaccaac
     7981 accattcaca ccaaccatta aaatgacatt taaacgacca tcttctaagt tcatagcttc
     8041 tgaattatca tcttcttgat ggtaaatctc tacgattttt tcaacaatga cttcacgcaa
     8101 atcttcagta tcttgaatat tacgtcgttg tgcttccata cgtaattctt cagttaacgt
     8161 catcactgta ttaaaaccga cgtctgcagt gattaacatt tcttctaaag cttcaaaaaa
     8221 gtcttcatct actttacgat atctcgctat caaattattt aattgttctt ggaaattttg
     8281 acgagatttt tcgagtcctg ctttaaattt agcacccatt ttttgagctt caatttcttc
     8341 aaaatcttca attgatatta agccatcgtc atcaaaatcc gcttcactca acttgcgtgg
     8401 cttctttttc acttcagcat tttctgctaa atcatttgcg tcctgcgttg aaccttcaga
     8461 atgtgtatct tctaatttgt cttgaccttg ttcttctgtt aaggatttaa cttcttcatt
     8521 ttctttattt gttgcaaact tatcttttaa gcgtttaaaa aagctcatta ttgctcctcc
     8581 ttcaacacat catctattgt atttaaattc acactcacaa gtttagtaac acctgattct
     8641 tgcattgtta caccgtataa cctatctgca aattccattg ttcctttacg gtgtgtaata
     8701 acaatgaatt gtgtttcgtc tgataactca tttaaatatt ttgcgtatct aataacattt
     8761 gcttcatcta gtgcagcttc aacctcatct aatataacaa aaggtgcaga tcttactttt
     8821 aaaattgcaa atagtaaagc aatagcagtt aatgcacgct caccaccact cagtaacgat
     8881 aaatgttgca actttttacc cggtggttgt accacaatat caataccagc tgttaaataa
     8941 tcggcttcag ttaattgcaa ttctgcatcg cctccaccaa acaattgttt gaacacagct
     9001 gtaaaatgtc cttgaatagc atggaaagtt tctttaaatc tttcagtaac ctcttgatcc
     9061 atttcactta taatttgctc taatgtttct ttagctttac gaagatctgt acgttgttca
     9121 cttaaaaatg tataacgttc atttaactct tcaaattgtt caattgcatt taagtttaca
     9181 ggacctagtt catcaatcga catcttcatt aacttaactt ttttacgtaa tgcgtcaatc
     9241 gattcatcac tcgtatattc agatttcgca cgttcaacag tcaattgata ttcatcattt
     9301 aaatgatcta tcgcatgatg aattaataca tctagctttg attgttcagc tttaatatct
     9361 tggtagtgat tttcgatagc taaaatatct tggtgacaaa cttgtagttt agcttcttgc
     9421 gcatcgattt gttcattcaa ctcaatacgt tgttgtttca atttatctaa ttcatctgat
     9481 aagcgtgttc tcgtttcttg ttgaccatta atttgatctt taatattttg aaaagcttgt
     9541 tcgcccatca cttcatccga attaaagaat gcaatttttt ctttaacatc ttttaattga
     9601 tgtttagttt gttgattttg attatttaat cgatctattg tctgttgttg tgttttaata
     9661 cgctctttaa ccacagcaag atcagattgt ttctgatgta aggtttgttg tgttttagta
     9721 acgctttcct taccttcttt agaaagtttt gtgtagcgtt caatttcatc ttctagtcgt
     9781 tttaaagatg ctttaatact ttctagataa gtttcttttt cactcaaagt ttgtcgactt
     9841 ttgtcactcg tataaccatc atttttttca aattcgaatt cttcatgatc attttttatt
     9901 tgtgtttctt gtgtagttaa tctatcgagc tccatttcaa aatgatgcac ttgctcttta
     9961 agtgtattat gcttttgact tttttcaaaa tacagttcac ttaattgatc actttttatc
    10021 ttcaactctt taaattgttg ttcaaatgat tctgtttgac gcaagtaatc ttctaattgg
    10081 tgtctcattg ttgtcaactc gtctttttga gacagaatac tttttgactt acgagcgcca
    10141 ccaccagtca tagaaccacc aggatttaca atatcacctt ccaaagtaac aatacgagtt
    10201 cgatatttaa tcgcacgtgc caattcattt gcatgcttta aatgatcaac gataatcgta
    10261 ttacctaata aattcccgat aatattttga tattctggtg ctactttaac tgcttccgaa
    10321 gcgatactaa taaatccgtt tgcctcttta gcaatagatt taatatcagt cgctaccact
    10381 ctactctgta taacatttaa tggtaaaaac gtcgcacgac ctaaattacg ttcttttaaa
    10441 aattgaatag cctggcgtcc atctttttct gaatctacaa tgacatgttg taatgaagca
    10501 cctaatgctg tttcaattgc ctgagttaat ttagatggca catcaataat ttccgcaact
    10561 gcaccataaa taccctttaa ttctttattt ttagctttca aaatatgttt gacgccattg
    10621 aaaaaataag tatattcttc ctcttgcgtt gccaaactat caatacgtgt tttcattttt
    10681 tcggtatatc gatatgcttg atacaatttc tcttcgtatt cattttgtgc tttttttgta
    10741 tcagtgaggt ctttttctat atttttaatt tctttatcta cagcagaaag ttctttgttg
    10801 gtctgttgat attctttttt tgtcgttttt atttgaccct gaatatcttt caattgctca
    10861 aaaacttcaa ctaatcgaga atctagtctt gattttttag cctcattctc ttctatagta
    10921 tgctttaaaa aacgaatatc attgttaaca tctgattgct ctgacattaa tgtatagtat
    10981 tcgtttttaa tttcttccaa tttttcatca tgtgcttcgt ctgaaacata tagttgttct
    11041 tcaagttcac gaatgacagc attgagttct ttttgtttac ttttcagaga cttataagta
    11101 tcttgagctt cagaaatctc atttgatata ttttctaaaa gctccattaa attttcttgt
    11161 tcttcttcat atcgtgcatt tgtttcagat tgatttttct tacgttcttc caaaacattt
    11221 aattgtcccg tatatttttc aaaggcttcc gtagctttta ctaattgata attaagcgat
    11281 tcaacatcat tatcaagttg atgacgttta cctttatatt gttgaatttg ttggcttaaa
    11341 cgttgcttgt cagcttcttt atttgcttgt tggccttgta aatcatttaa acgttgatct
    11401 aattgtctat tgtcatttgt atattgatca atatcgtgca ctgtaactac aatgtcacta
    11461 tgtttcattt gatgtgaaag tgtcttatat tctttagcta tagctgcctc ctcttttaga
    11521 ggttctacgc gaccttccaa atcatataaa atgtcttcta ctctcgttaa attatcttct
    11581 gtttggtcaa gtttatttaa tgattcagcc ttacgttttt tatatttaag tacaccagcc
    11641 gattcttcaa taatttgacg tctatcaatt ggtttagcat ttagtatttc atcaactcta
    11701 ccttgcgaga taatgctata cgcttctttt cccaatccag aatctaaaaa taaatcggca
    11761 atatctttta atcttgcacg gtcattattt atgtagtact cactttcacc acttcgatac
    11821 aatcttcttg ttacaataac ttcgttttca tcaacactga gctttttaga atgattatct
    11881 aatcttaact gtacttcagc ataattttga gctttgcgat gttctgcacc tgagaagata
    11941 atatcttcca tttttgagcc acgtaatgat ttagccgatt gttcacccaa cacccattta
    12001 atagcatctg taatattact tttaccgctt ccatttggac caacaattgc agttacacct
    12061 ttatcgaatt gaacattggt ttgatctgca aaagacttaa atccaatggc atctattgat
    12121 tttaaataaa ccatcctaaa ctccttatca caattttaaa gaacacatgt atacgatatt
    12181 ttagtatttg tatattaaat ttcgaagttg ttccataaaa tattaaaaat tcttccttaa
    12241 atcctaaatc gaacacctat atgtcgtatc atataaattt ctatttaatt tgttttaatt
    12301 gcttataggc actttcagca gcacgttgtt ctgattcttt tttcgttttc cctttacctt
    12361 cagctattgc ttccccttgc agaataactt ctgaagtgaa tagacgatga tgtgccggtc
    12421 cctcttcttt tattaaatta taggttacat cacctttatt ttgctggtgc acatattctt
    12481 ggaattgtgt tttaaaatct accacgccta ataactcatt ttgttctaca tgtgggaaaa
    12541 tgactttctc agcaaatttc caaactatat ctagtccttg atccaaatac aatgccccaa
    12601 taaatgcttc gaatgcatct gatattaatg atggtcttgt acgtccccct gttttctctt
    12661 cacctttacc aagtaaaatc atttcgttca atccaatttt attcgcaaat attacaagtg
    12721 agggctcaca tacaatagtg gcacgcattt ttgttaaatt cccttctggc aagttgggat
    12781 gtttatcaaa taaatatcgt gaaaccgtca attctaatac cgcatcaccc aaaaactcta
    12841 aacgctcatt atggtctaaa cgattcatat taaaatcatt aataaaactc gaatgcgaaa
    12901 atgcttgttg gtataaatca atattttgat aagtaaagcc taactctgtc attttagtat
    12961 caaagcgctt tctaaaacga ttaactatct cacttttctt ttgtttagac attattttat
    13021 ctcctttatg tgttgctctt gaatcatctt taattttacg ttaaaactat tgataattaa
    13081 agaaaaaaac tgagtcgaca atactgacga cccagatgta agatttatta tttttcaaga
    13141 ctgttaataa atttaacagc atcaccaaca gtgttgattt tttcagcttc ttcatcagga
    13201 atttcagtac caaactcgtc ttctaattcc attactaatt cagcgatatc aagtgagtca
    13261 gcgcctaaat catctttgaa agatgcatct tcagttactt tatcagcgtc tacacctaaa
    13321 cggtcaacga tgatatcttt tactttatcg aaattttcca cgtcgattca cctcctttaa
    13381 aaatgcctat acatagacta ctatattttc ccattttaaa ttctaaaaaa caagtagaaa
    13441 ttttagaaac acttatcaat ttattgatta gtgtttctta gggagaaatt ctggaacctt
    13501 atctaggttg cttagaattt cccccgcaaa gttgactagg tcagacaatt ctccattgga
    13561 tgaccagtca accactgcgt caatgagctt tagctcaaat atattacatg tacattccac
    13621 catttacatg gattgtttga cctgtaatat attttgcttt gtctgatgct aagaacgcta
    13681 ctgtattagc aatatctgtg tcttgaccaa aacgtgctaa cggaatttga gtcaacattt
    13741 gttctttaag ctcatcactt aaagcatctg tcatatcaga aacaataaaa ccaggtgcaa
    13801 ctgcatttac agtgatacca cgagatgcta attcacgcgc cgcagattta gttaaaccaa
    13861 taacacctgc ttttgttgca acatagtttg cttgtcccgg attacctact gctccaacaa
    13921 cacttgataa attgatgata gcaccactac gttgtcttaa catttgtggt gttgcttttt
    13981 ggatacagtt aaatacacct tttaagtttg tgtcaataac atcatcccac tcttgttctt
    14041 tcatacgcat taataaatta tcgcgagtaa tacctgcatt atttactaaa acatctaaag
    14101 aaccaaattg gctaactact tctttaatca ttgctttaac ttcatcagca tcggcaacat
    14161 ttgcttgaat cgcaaaactg tcaacacctt tagctttgat ttcttcgact actgcttcag
    14221 ctttctcttt gctgcctgca tagtttactg ctacattata tccttcttct gctaattgta
    14281 acgcaatact acgtccaatt cctcttgatg cacctgttac taaagcactc ttagtcattt
    14341 tcattccatc ctttcacatc ttctaaagtt tgaattgatg ttaacttaac atctctattt
    14401 atttttttaa ttaagccaga taaaactttt ccaggaccaa tttcaataaa atgatcaaca
    14461 ccttggtcta ttagccattc tgttgagtta atgaattgta ctggtgaata taattgcttg
    14521 accatattag atttaattac ttctttgtca gtttcacctt gcgcatttac attttgaact
    14581 acaggaaact tagcatcacg ccattcaaat tgattaatgt aacttgaaaa atcttcttca
    14641 atcactttca ttagcgatga atggaatggt ccagatactg ctaaaggcat gacacgtttt
    14701 gcacctaatg atttaccttt ttctactagc tcatcaatta aagctttgtg acctgaaaca
    14761 acaatttgac ctgggcaatt aatgtttgct ggttcaatta ttttgtcatc agatgataat
    14821 gacttacaaa tttcatcgac tttatcaaaa tctaatccca atactgcagc catgcttcct
    14881 acaccagtag gaaatgcttg cgccattaat tgaccacgtt ttctaacaat tttaactgca
    14941 tcttcaaatg ataatacgtc agctgcaact aaacttgaat attcacctaa actatgcccc
    15001 atagtaaaat caggattcaa attttttagc gctgctaata atgccgaact atgcgtcaat
    15061 aaagctggtt gtgtgttttc agtttcaccc aatttacctt cttcatcagt aaacattgtc
    15121 tctaaaatat caaagtctaa tgtgttcgct gctgaagtta aaatttcagt tgcttgatca
    15181 ttgttgttaa acaaatcttg cgccatacca actttttggg caccttgtcc cggaaaaata
    15241 attgctgttt tactcatttg attcacctac agtctctttc attgtttgta caatattttg
    15301 ttctcctgcg attttcgctt gtctaattgc agaataaaaa gctttagcat ttgaactacc
    15361 gtgtgcttta actacagtac cttccaatcc taataatacg gaaccaccgt attctgagta
    15421 atccatcttt ttagcgaatt cagctaaatc tttcttcaat attgcacctg ctaatttatt
    15481 tttagtacta ctcataatcg tatcttttaa cattttaccg attgattttg cagtaccttc
    15541 taaattttta aggaccatgt tcccagtata gccatcggta actacaacat ctgtatcgcc
    15601 atccattaat gtcttcgctt caatattccc aacaaaattc aatgaatgat catgatttaa
    15661 taactcatat gattttttcg ttaaactatt acctttagct ggctcggttc ctatatttaa
    15721 taatgagatt ttcggattat caatacctct aattttttga gcataaatat cccctagttg
    15781 cgcatactgt aataagtgtt caggtttagc atcagcattt gcaccaacgt ctaaaaagac
    15841 aaaacctttt ccatcaatcg ttggcaatgt tactactaaa gccggtctag ctacaccttt
    15901 aatacgtcca acaatgaata aaccagctga cattaaagca ccagtattac ctgctgacac
    15961 acatccatct gcttcaccag atttcacagc ttcagccatt tttaccattg agctatcttt
    16021 tttacgttta atcgctctaa caggctcatc ttccatttca atcttttcag aacaatgtct
    16081 aaattcgatt cgttcatggt tcagattata ctttttttcg tcaccgaaaa gtataatttc
    16141 tagatcttta aagtcttcaa cagccttttg tacggcttct aatacgatat caggcgcatt
    16201 gtcgccaccc atcatatcaa ttgctaattt aaccataatt ttatcctcgc ttatcataaa
    16261 acattttaaa atttcctttg aaaactaatg tatgtttaac atatgacttt acttcgacgt
    16321 aataatgttt tgcagtttga tttacaactc gtgcttctgc tcttaccgta tcatttaatt
    16381 ttactttttc aataaattga atgctactct catgagttaa aactgttggt tgcttaatta
    16441 gcgcaacaca taacgaattt gcctgagcaa acagcacatg accacgcgca attccagttt
    16501 tatgaaaaac agaatccgat gtaatatcta aaattgattg cgctttaaca tttggattga
    16561 cttgaatcaa atcaccaata aattcttgtt cttcaataga acttatttgg tcataattct
    16621 tttcagcaac taatttaata cgcttcctta attctggtat gtttaaataa gtgcgatcta
    16681 aacgaattgt ttgtatactc acttgaaata agtcgcttag ttcatggtct gtgatgaagg
    16741 gattgctatc aatttgttgt ctgattgctt ctctacgttt atctttcttt agtttcaacg
    16801 tctcacccct cattttttag tacctagtct taaacattcc tcacatatca taacactttc
    16861 tatttaaccg actcaacaaa taactgtaat atttagctat tatttagtcg aaaatttata
    16921 aattgttaaa ataccacttt acatttaaat agttcaagtg tcatatcact caattaacga
    16981 agtgttgcac tcaaattgac aaatcagcat ggcaattagt caaaactacg atgtaataaa
    17041 ttttcttcaa caaaatgacg taaatgttga tacgtatttt caaagaatac gccagattga
    17101 ataagttcag ctgcttcatc acgagcaact tctaacatac gataatcttc aactaaattg
    17161 gcaactaaga aatctggcaa tccactttgt ttaacaccaa agaaatctcc aggaccacgc
    17221 atttctaagt ctcgttcact caattcaaat ccatccgttg tttgtgtcat aattgtcatt
    17281 ctttcaattc ctgtttctgt tttaggggat gcaattaaaa cacagtaact ttgctggtca
    17341 cttctaccta cacgaccgcg taactgatgt aaagttgata atccaaagcg atccgcatca
    17401 taaatcatca taaaagttgc attcggtaca ttaacaccta cttcaacaac agtagtagaa
    17461 actaaaacat ttatctcatg attactaaac ttttgcatga cctcatcttt ttcatcggca
    17521 gataacttac catgcaataa ccctacacgg gaaacaccat aatactgttg taaagactcg
    17581 tacaatgcga caacattttg aacatcttcg agatgctcag aactttctat tagcgggcaa
    17641 atgacatatg cttgacgacc ttttttcaac tctgaggtca tttgcatcaa aactttatcg
    17701 tattgctcat gctttgccca agtagtaatg ataggtttac gaccttttgg taattgttta
    17761 attgaagaca catccatctc accaaaaact gatattgcta gtgttcttgg tatcggcgtt
    17821 gctgtcataa ataacacatt cgtcattgca cctttttctc ttaaaagctg gcgttgattc
    17881 acaccaaatc gatgttgttc atctgtaatt actaaaccaa cattatggaa aatcacatca
    17941 tcttgaatca aagcatgggt tccaattaaa caatcaatcg taccattttc aagttgttct
    18001 aaaagtatct ttcgtttctt accttttact gacccagtta acaatgcaac gttcatagaa
    18061 tctccaaata aagccattaa actttcagca tgttgctctg ctaaaatttc agttggtacc
    18121 atcaatgctg attgataacc agcagttttt aacgcataca tacaaattgc agcaactact
    18181 gtttttcctg aacctacatc accttgaagt aatcgatgca tacgtattgg tgcttttaaa
    18241 tctctaaaaa tttcattaac actggatttc tgtgcttcag ttagttcaaa aggtaaacga
    18301 tcaataaatg atttaacttg gtctatgtca taatcaattt caattgcttc gtcagatgac
    18361 ttttctaatc tatttagcca ttgcatacgt aattcgaata aaaacagttc agtaaatgca
    18421 taggttctac gagcacgtaa taaatcctct ttacttttag gatgatgtaa tgtgttcaaa
    18481 gtaaagtcca aggtctctaa tttatatttt tctcttagtt catcagttaa ccattcatga
    18541 attgtcacat catttaacgc ttgtctaatt tggtctcgta tttgcttttg tttaatacct
    18601 tccttaatac gatagactgg ttctaattga acatctgcgt tttcttgagt ttgtgtccct
    18661 tgtgaattaa agaaaaccct attaccagta atttcctgtt taaccctatt ccacttacct
    18721 ttaacagtta tagtttgatt taattcgatt ttctttttta aatacggttg attgaaaaaa
    18781 atacatttga cagcaatatt atttaccatt aaatgaacgg ttaattttga tttatttctt
    18841 ccaaaaaatg caactactgg agctgtatat acttgtcctt ctatcgtaac gttagattga
    18901 tcttctgctt gattcaaatc aatcactgta ttatcttcat atctagttgg caaataaaga
    18961 acaagatctt ccactgtatg aatatttagt tgttgcaata cttctatttt cttaggacct
    19021 atacctttta attgtaaaag agaatatgga ctttctatta agtttacttt agccaaaata
    19081 aatcacctat gttttatttg attttacgta tcatttagta tgttatttat tttatcatga
    19141 ctaagttgaa catgacattg ttagcaactc gagaacgata cttttaaccc gcaatatcac
    19201 taaaatagca aaataaaaaa ctaccaactg atgatttatc attggtagtt ttttatttta
    19261 aatttttatt ctactgaaaa gaaatattga taaattggtt gtccaccttc atgaacttcc
    19321 acttctacat ctggatattg ctcttcgatc cagtttatca tgttatctgt aactgcttgc
    19381 tctgcatctt gaccaataat cacagtcaat atttcactat cttctgctaa catctcattt
    19441 aacaactcag taaccgttgt taattgatca ctttggctgc ttacaatctt atcttcaatc
    19501 aagcccataa acgcgtcttt tttaatctca acgccatcaa ttttcgtatc acgaacagcg
    19561 tacgttaatg aaccagattt aacgttattt actgaatcag ccatttgcgc tttattttct
    19621 tcaagtgttg cgtccacatc atattggaat agtgcgctta taccttgagg aatagatttc
    19681 gttggaataa caacagcttc tgcatcaaca atactcgctg cttgttcact tgccattaag
    19741 atatttttat tattcggtaa aataattgca cgtttacatt ttgattgttc aatgacttta
    19801 acgatatctt ctgtagaagg attcatcgtt tgtccaccac taatgatatg tgtggcaccc
    19861 attgatttaa atatctctga aataccttca cccatagaaa tagtaataat tgctgtttca
    19921 accgtttcca ttttcggttt agctgtgtgc tgttcttttc gaatcacttc acggtgctgt
    19981 tctctcatat tttcaacctt aagtttaatt aattcaccat attgttgacc ataattaaac
    20041 actttacctg ggtattcggt atgcacgtga actttcacaa tttcttcatc attaatgact
    20101 aataaagaat caccaaattg actcatatct tgcctgaatt cttgttcatc aaaggctttt
    20161 ttattctttc caaaacgaac catcatttca gtacaatagc cataaataat atcttcagta
    20221 ttaattacac catggaaatc atgttcatca tgtacaaatt catctttatc tatctttgca
    20281 actttggctt caactttttc acctttaagc gcttttaaga atccttcgta aacgcataac
    20341 aaacctttac cgccactatc aacaacacca acttctttaa gtacagctaa taagtttggt
    20401 gtgttttcaa gtgattcatt ggcttttaca ataatgtact ccattaattc tatacaatct
    20461 tcagtattat ttgctttttc tattgcagct tgcgcagcat cttttgcaac tgtaagtatt
    20521 gtaccttcaa ctggtttcat aacagcttta tatgccgttt caacaccagc ttgaaaactt
    20581 tcagctaaca attttgaatt aatttcagat tcactttcaa tatttttaca aaatcctctg
    20641 aataattgtg acaagatgac accagagtta cctcttgcac ccattagtaa acctttcgag
    20701 aatgttttac ctaattcgcc gatatttttc gacaaattat tctctacttc ttcgcgacct
    20761 gaagtcatag taagattcat atttgttcct gtatcaccat ctggcactgg atacacattc
    20821 aaagaatcta ccaaatctgc attgttagat aaattttgtg ccccttgtat aatcatatcg
    20881 gcaaataatt taccattaat tttgctaatc atttcaagtt gtcctcctaa gctttcttgc
    20941 ctgtattatt cacacgtaca ccttgtacat atatattgat tgaatttact gatacattaa
    21001 gtgatttttc caaagtatat ttcactgttg attgtacatt attggcaact tcagatattt
    21061 tcacaccgta acttacaata atgtacatat ctatatccac tacgccatta ttttcagtta
    21121 ctttgatgcc tttagcataa ttttcatgtc ctagtatttc cgcaatacca tctctaactt
    21181 gttgtctaga tgccatacct acaataccat aacattcaac ggcctttcca cctacaaccg
    21241 aagcaatcac ttcgtttgaa atatcaattt taccgtaatc atttgaaatc tctaatgtca
    21301 tatctttgtc cctcctaaat ttcaaagttt attattcgtt ttccctaatc acttttaaaa
    21361 tttt
//
LOCUS       DALPQQ010000033        21306 bp    DNA     linear   BCT 22-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus strain K18-6-464
            SAMD00233528-rid16434743.denovo.033, whole genome shotgun sequence.
ACCESSION   DALPQQ010000033 DALPQQ010000000
VERSION     DALPQQ010000033.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMD00233528
            Sequence Read Archive: DRR236061
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 21306)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 21306)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001543423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001543423.1
            Genome Coverage       :: 77x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/22/2022 17:09:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,811
            CDSs (total)                      :: 2,743
            Genes (coding)                    :: 2,689
            CDSs (with protein)               :: 2,689
            Genes (RNA)                       :: 68
            rRNAs                             :: 2, 4, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 4, 2 (16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 54
            CDSs (without protein)            :: 54
            Pseudo Genes (ambiguous residues) :: 0 of 54
            Pseudo Genes (frameshifted)       :: 27 of 54
            Pseudo Genes (incomplete)         :: 27 of 54
            Pseudo Genes (internal stop)      :: 10 of 54
            Pseudo Genes (multiple problems)  :: 10 of 54
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..21306
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMD00233528-rid16434743.denovo.033"
                     /strain="K18-6-464"
                     /db_xref="taxon:1280"
                     /geo_loc_name="Japan: Niigata"
     gene            complement(112..876)
                     /gene="argB"
                     /locus_tag="O7798_001064"
     CDS             complement(112..876)
                     /gene="argB"
                     /locus_tag="O7798_001064"
                     /EC_number="2.7.2.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498746.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetylglutamate kinase"
                     /protein_id="HDC2863331.1"
                     /translation="MKFIVIKIGGSTLSDMHPSIINNIKHLRSNNIYPIIVHGGGPFI
                     NEALSNQQIEPHFVNGLRVTDKATMTITKHTLIADVNTALVAQFNQHQCSAIGLCGLD
                     AQLFEITSFDQQYGYVGVPTALNKDALQYLCTKFVPIINSIGFNNHDGEFYNINADTL
                     AYFIASSLKAPIYVLSNIAGVLINDVVIPQLPLVDIHQYIEHGDIYGGMIPKVLDAKN
                     AIENGCPKVIIASGNKPNIIESIYNNDFVGTTILNS"
     gene            complement(892..2133)
                     /gene="argJ"
                     /locus_tag="O7798_001065"
     CDS             complement(892..2133)
                     /gene="argJ"
                     /locus_tag="O7798_001065"
                     /EC_number="2.3.1.1"
                     /EC_number="2.3.1.35"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498747.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional glutamate
                     N-acetyltransferase/amino-acid acetyltransferase ArgJ"
                     /protein_id="HDC2863332.1"
                     /translation="MKHQETTSQQYNFSIIKHGDISTPQGFTAGGMHIGLRANKKDFG
                     WIYSSSLASAAAVYTLNQFKAAPLIVTEDTLQKSKGKLQALVVNSANANSCTGQQGID
                     DARQTQTWVAQQLQIPSEHVAVASTGVIGEYLPMDKIKTGTEHIKDANFATPGAFNEA
                     ILTTDTCTKHIAVSLKIDGKTVTIGGSTKGSGMIHPNMATMLAFITTDASIESNTLHQ
                     LLKSSTDHTFNMITVDGDTSTNDMVLVMANHQVEHQILSQDHPQWETFVDAFNFVCTF
                     LAKAIARDGEGATKLISVNVSGAKSISDARKIGKTIVSSNLVKSAIFGEDANFGRIIT
                     AIGYSGCEIDPNCTYVQLNQIPVVDKGMAVLFDEQAMSNTLTHENVTIDVQLGLGNAA
                     ATAYGCDLSYDYVRINTSYRT"
     gene            complement(2145..3176)
                     /locus_tag="O7798_001066"
     CDS             complement(2145..3176)
                     /locus_tag="O7798_001066"
                     /EC_number="1.2.1.38"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498748.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetyl-gamma-glutamyl-phosphate reductase"
                     /protein_id="HDC2863333.1"
                     /translation="MIKVGIVGGSGYGAIELIRLLQTHPHVTIAHIYSHSKVDEPLKL
                     TFPHLQHIMQHFEALTVDNNDCDVIFFATPAPVSKTCIPPLVEKGIHVIDLSGAFRIK
                     NREIYEAYYKETAAAQDDLNHAIYSISEWQSFDNNGTKLISNPGCFPTATLLALHPLI
                     SEKIVDLSSIIIDAKTGVSGAGRSLSQRVHFSEMNENLSAYAIGNHKHKPEIEQYLSI
                     IAGQDVSVIFTPHLVPMTRGILSTIYVKLSSEYTTESLHKLMTSYYANQPFVRIRDIG
                     TFPTTKEVLGSNYCDIGIYVDETTQTAILVSVIDNLVKGASGQAIQNLNILYDFEVTT
                     GLNQSPVYP"
     gene            complement(3215..4399)
                     /gene="rocD"
                     /locus_tag="O7798_001067"
     CDS             complement(3215..4399)
                     /gene="rocD"
                     /locus_tag="O7798_001067"
                     /EC_number="2.6.1.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498749.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ornithine--oxo-acid transaminase"
                     /protein_id="HDC2863334.1"
                     /translation="MNSIIELTDYYSSNNYAPLKLVISKGKGVKVWDTDGKQYIDCIS
                     GFSVANQGHCHPTIVKAMTEQASKLSIISRVLYSDNLGKWEEKICHLAKKDKVLPLNS
                     GTEAVEAAIKIARKWGSEVKGITDGQVEIIAMNNNFHGRTLGSLSLSNHDAYKAGFHP
                     LLQGTTTVDFGDIEQLTQAISPNTAAIILEPIQGEGGVNIPPKGYIQAVRQLCDKHQI
                     LLIADEIQVGLGRTGKWFAMEWEQVVPDIYILGKALGGGLYPVSAVLANNDVMRVLTP
                     GTHGSTFGGNPLAIAISTAALDVLKDEQLVERSERLGSFLLKALLQLKHPSIKEIRGR
                     GLFIGIELNTDAAPFVDQLIQRGILCKDTHRTIIRLSPPLVIDKEEIHQIVAAFQDVF
                     KN"
     gene            complement(4652..6007)
                     /gene="brnQ"
                     /locus_tag="O7798_001068"
     CDS             complement(4652..6007)
                     /gene="brnQ"
                     /locus_tag="O7798_001068"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498750.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid transport system II
                     carrier protein"
                     /protein_id="HDC2863335.1"
                     /translation="MKKKLTFKENMFIGSMLFGLFFGAGNLIFPIHLGQAAGSNVFIA
                     NLGFLITAIGLPFLGIIAIGISKTSGLFEIASRVNKTYAYIFTIALYLVIGPFFALPR
                     LATTSFEIAFSPFLSPKQITLYLFIFSFVFFVIAWFFARKPSRILEYIGKFLNPVFLV
                     LLAIILLFAFIHPLGGISDAPISKQYQSHALFNGFLDGYNTLDALASLAFGIIIVATI
                     KKLGIENPTDIAKETIKSGTISIIMMGIIYTLLAIMGTLSIGHFKLSENGGIALAQIT
                     QYYLGNYGIVLLSLIVMVACLKTAIGLITAFSETFEHLFPKMNYLAIATVVSFISFLF
                     ANVGLTKIIMYSVPVLMFLYPLAIALIVLTLFSSKFHHSKLIYQCTIFFTMIAALVDG
                     LKASPEFISSTSFSQTLINFSQKYLPLSDIGMGWVVLSLIGFIIGFIIYKIKHRKIPQ
                     A"
     gene            complement(6283..6840)
                     /locus_tag="O7798_001069"
     CDS             complement(6283..6840)
                     /locus_tag="O7798_001069"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000606891.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="isochorismatase family protein"
                     /protein_id="HDC2863336.1"
                     /translation="MINFNKTALVLIDLQEGILKMDYAPYTAENVVQNANKLIDVFRK
                     NNGFIAFVRVNFYDGKDVLQPNAMISLPPKEGDDYSRFHHLLDKRDDDFVIDKRHFSA
                     FVGTDLDLQLRRRGIDTIVLGGVATHIGVDTTARDAYQLNYNQFFVTDMMSAQNETLH
                     QFPIDNVFPLMGQTITTNDFLNILN"
     gene            complement(6907..8547)
                     /locus_tag="O7798_001070"
     CDS             complement(6907..8547)
                     /locus_tag="O7798_001070"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498752.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-keto acid decarboxylase family protein"
                     /protein_id="HDC2863337.1"
                     /translation="MKQRIGAYLIDAIHRAGVDKIFGVPGDFNLAFLDDIISNPNVDW
                     VGNTNELNASYAADGYARLNGLAALVTTFGVGELSAVNGIAGSYAERIPVIAITGAPT
                     RAVEQGGKYVHHSLGEGTFDDYRKMFAHITVAQGYITPENATTEIPRLINTAIAERRP
                     VHLHLPIDVAISEIEIPTPFEVTATKYTDASTYIELLATKLHQAKQPIIITGHEINSF
                     HLHQELEDFVNQTQIPVAQLSLGKGAFNEENPYYMGIYDGKIAEDKIRDYVDNSDLIL
                     NIGAKLTDSATAGFSYQFNIDDVVMLNHHNIKIDDVTNDEISLPSLLKQLSNISYTNN
                     ATFPAYHRPTSPDYTVGTEPLTQQTYFKMMQNFLKPNDVIIADQGTSFFGAYDLALYK
                     NNTFIGQPLWGSIGYTLPATLGSQLADKDRRNLLLIGDGSLQLTVQAISTMIRQHIKP
                     VLFVINNDGYTVERLIHGMYEPYNEIHMWDYKALPAVFGGKNVEIHDVESSKDLQDTF
                     NAINGHPDVMHFVEVKMAVEDAPKKLIDIAKAFSQQNK"
     gene            8741..8842
                     /locus_tag="O7798_001071"
     CDS             8741..8842
                     /locus_tag="O7798_001071"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498753.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDC2863338.1"
                     /translation="MMLQNTIAKKKQARHLMKVYAPVYSKHYLASNN"
     gene            complement(8821..10866)
                     /locus_tag="O7798_001072"
     CDS             complement(8821..10866)
                     /locus_tag="O7798_001072"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017431573.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS transporter subunit IIABC"
                     /protein_id="HDC2863339.1"
                     /translation="MRKKLFGQLQRIGKALMLPVAILPAAGLLLAIGTAMQGESLQHY
                     LPFIQNGGVQTVAKLMTGAGGIIFDNLPMIFALGVAIGLAGGDGVAAIAAFVGYIIMN
                     KTMGDFLQVTPKNIGDPASGYASILGIPTLQTGVFGGIIIGALAAWCYNKFYNINLPS
                     YLGFFAGKRFVPIMMATTSFILAFPMALIWPTIQSGLNAFSTGLLDSNTGVAVFLFGF
                     IKRLLIPFGLHHIFHAPFWFEFGSWKNAAGEIIHGDQRIFIEQIREGAHLTAGKFMQG
                     EFPVMMFGLPAAALAIYHTAKPENKKVVAGLMGSAALTSFLTGITEPLEFSFLFVAPL
                     LFFIHAVLDGLSFLTLYLLDLHLGYTFSGGFIDYFLLGILPNKTQWWLVIPVGLVYAV
                     IYYFVFRFLIVKLKYKTPGREDKQSQAATASATELPYAVLEAMGGKANIKHLDACITR
                     LRVEVNDKSKVDVPGLKDLGASGVLEVGNNMQAIFGPKSDQIKHEMQQIMNGQVVENP
                     TTMEDDKDETVVVAEDKSATSELSHIVHAPLTGEVTPLSEVPDQVFSEKMMGDGIAIK
                     PSQGEVRAPFNGKVQMIFPTKHAIGLVSDSGLELLIHIGLDTVKLNGEGFTLHVEEGQ
                     EVKQGDLLINFDLDYIRNHAKSDITPIIVTQGNITNLDFKQGEHGNISFGDQLFEAK"
     gene            11452..12507
                     /locus_tag="O7798_001073"
     CDS             11452..12507
                     /locus_tag="O7798_001073"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000145567.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF871 domain-containing protein"
                     /protein_id="HDC2863340.1"
                     /translation="MTGFSVYLGQPLDEAYIKRMIKQGYQMIFTSVQIPEEDDETKYH
                     YFTKLLNLLKHEQVTYLIDANPSILTPSFYDHLRQYDAQFMIRIDHSTSIEAIEAIMA
                     QGLKCCLNASIISRELLTSLHQQLNDFTLLSFCHNYYPRPDTGLSVDLVNKKNELIYQ
                     FNPKAQIYGFIVGSDLRGPLHKGLPTIEATRHSHPVVAAKLLQETGVSEVLVGDSLIE
                     MRQAKQLIDFCKHRHFTLCIEEVFDTTVTYLFDMCHKVRPDNPENVIRSETSRQICPH
                     SIQPQFTTQRRIGSVTVDNLNNGRYQGEMQIVRQTLSAHDNVNVVAQIIKEDLPLLSC
                     IEPNDTFDFQKTRECKR"
     gene            12507..13403
                     /gene="murQ"
                     /locus_tag="O7798_001074"
     CDS             12507..13403
                     /gene="murQ"
                     /locus_tag="O7798_001074"
                     /EC_number="4.2.1.126"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498756.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetylmuramic acid 6-phosphate etherase"
                     /protein_id="HDC2863341.1"
                     /translation="MENSTTEARNEATMHLDEMTVEEALITMNKEDQQVPLAVRKAIP
                     QLTKVIKKTIAQYKKGGRLIYIGAGTSGRLGVLDAAECVPTFNTDPHEIIGIIAGGQH
                     AMTMAVEGAEDHKKLAEEDLKNIDLTSKDVVIGIAASGKTPYVIGGLTFANTIGATTV
                     SISCNEHAVISEIAQYPVEVKVGPEVLTGSTRLKSGTAQKLILNMISTITMVGVGKVY
                     DNLMIDVKATNQKLIDRSVRIIQEICAITYDEAMALYQVSEHDVKVATVMGMCGISKE
                     EATRRLLNNGDIVKRAIRDRQP"
     gene            13415..14869
                     /locus_tag="O7798_001075"
     CDS             13415..14869
                     /locus_tag="O7798_001075"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498757.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS transporter subunit EIIC"
                     /protein_id="HDC2863342.1"
                     /translation="MTKEQQLAERIIAAVGGMDNIDSVMNCMTRVRIKVLDENKVDDQ
                     ELRHIDGVMGVIHDERIQVVVGPGTVNKVANHMAELSGVKLGDPIPHHHNDSEKMDYK
                     SYAADKAKANKEAHKAKQKNGKLNKVLKSIANIFIPLIPAFIGAGLIGGIAAVLSNLM
                     VAGYISGAWITQLITVFNVIKDGMLAYLAIFTGINAAKEFGATPGLGGVIGGTTLLTG
                     IAGKNILMNVFTGEPLQPGQGGIIGVIFAVWILSIVEKRLHKIVPNAIDIIVTPTIAL
                     LIVGLLTIFIFMPLAGFVSDSLVSVVNGIISIGGVFSGFIIGASFLPLVMLGLHHIFT
                     PIHIEMINQSGATYLLPIAAMAGAGQVGAALALWVRCKRNTTLRNTLKGALPVGFLGI
                     GEPLIYGVTLPLGRPFLTACIGGGIGGAVIGGIGHIGAKAIGPSGVSLLPLISDNMYL
                     GYIAGLLAAYAGGFVCTYLFGTTKAMRQTDLLGD"
     gene            14872..15747
                     /locus_tag="O7798_001076"
     CDS             14872..15747
                     /locus_tag="O7798_001076"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498758.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MurR/RpiR family transcriptional regulator"
                     /protein_id="HDC2863343.1"
                     /translation="MTNILYRIDKQLSDFTKTEKIIADYILKNPHKIIDMTVNDLADV
                     TNVSTASIVRFSRKMTHQGFQELKIAISRYLPEDIATNPHLELIENESVETLKNKMIA
                     RATNTMRFVATNIMDAQIDAICDVLKNARTIFLFGFGASSLTIGDLFQKLSRIGLNVR
                     LLHETHLLVSTFATHDDRDCMIFVTNQGSHSELQSIAQVATHYSIPIITISSTANNPV
                     AQIADYALIYGRTDENEMRMAATTSLFAQLFTVDILYYRFVALNYHAILDCITQSKMA
                     LDNYRKHLATIDFKH"
     gene            complement(15941..16222)
                     /locus_tag="O7798_001077"
     CDS             complement(15941..16222)
                     /locus_tag="O7798_001077"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498759.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDC2863344.1"
                     /translation="MVLITYQIILFFIISLSYYLTLNHYMAVTVGNFTSIFGMFAAIL
                     FMYYYLLYKSPEYNQRKRFKHFIHITNLIIIAFSTFVLVHLALKLFFSI"
     gene            16435..19224
                     /locus_tag="O7798_001078"
     CDS             16435..19224
                     /locus_tag="O7798_001078"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498760.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I restriction endonuclease subunit R"
                     /protein_id="HDC2863345.1"
                     /translation="MAYQSEYALENEMMNQLEQLGYERVTIRDNKQLLDNFRTILNER
                     HADKLEGNPLTDKEFQRLLTMIDGKSIFESARILRDKLPLRRDDESEIYLSFLDTKSW
                     CKNKFQVTNQVSVEDTYKARYDVTILINGLPLVQVELKRRGIDINEAFNQVKRYRKQN
                     YTGLFRYIQMFIISNGVETRYFSNNDSELLKSHMFYWSDKQNNRINTLQSFAESFMRP
                     CQLAKMISRYMIINETDRILMAMRPYQVYAVEALIQQATETGNNGYVWHTTGSGKTLT
                     SFKASQILSQQDDIKKVIFLVDRKDLDSQTEEEFNKFAKGAVDKTFNTSQLVRQLNDK
                     SLPLIVTTIQKMAKAIQGNAPLLEQYKTNKVVFIIDECHRSQFGDMHRLVKQHFKNAQ
                     YFGFTGTPRFPENSSQDGRTTADIFGRCLHTYLIRDAIHDGNVLGFSVDYINTFKNKA
                     LKAEDNSMVEAIDTEEVWLADKRVELVTRHIINNHDKYTRNRQYSSIFTVQSIHALIK
                     YYETFKRLNKKLEQPLTIAGIFTFKPNEDDRDGEVPYHSREKLEIMISDYNKKFETNF
                     STDTTNEYFNHISKNVKKGVKDSKIDILIVVNMFLTGFDSKVLNTLYVDKNLMYHDLI
                     QAYSRTNRVEKESKPFGKIVNYRDLKKETDDALRVFSQTNDTDTILMRSYEEYKKEFM
                     DAYRELKMIVPTPHMVDDIQDEEELKRFVEAYRLLAKIILRLKAFDEFEFTIDEIGMD
                     EQENEDYKSKYLAVYDQVKRATAEKNKVSILNDIDFEIEMMRNDTINVNYIMNILRQI
                     DLEDKAEQRRNQEQIRRILDHADDPTLRLKRDLIREFIDNVVPSLNKDDDIDQEYVNF
                     ESIKKEAEFKGFAGERSIDEQALKTISNDYQYSGVVNPHHLKKMIGDLPLKEKRKARK
                     AIESFVAETTEKYGV"
     gene            19429..20271
                     /locus_tag="O7798_001079"
     CDS             19429..20271
                     /locus_tag="O7798_001079"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498761.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sce7726 family protein"
                     /protein_id="HDC2863346.1"
                     /translation="MDNRNMINRVFSQKILHQIAIKNKSDVVDEAYDFYIQGPKNINV
                     IQKMKSLYNYLKKSYRNEYFYKNTILNKLLLGRHSINTTTALSEMPIGKSIADFILLN
                     GKGVVYEIKTELDKLDRLDNQINDYYEVFNYVVVITNDKHLNKVMARYKDTTVGILVL
                     TTRNTLSEVQKPKENNSLLNTKAMYNFLRKEERKRVIAQNHMDVPTYNDFTEYDVLFD
                     VFKEIPMTKLHNNMISELKKRGNMKEYKDEFLAAPAEIKFLLYFAKMTKKDKNKLYHF
                     LKED"
     gene            20273..21196
                     /locus_tag="O7798_001080"
     CDS             20273..21196
                     /locus_tag="O7798_001080"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498762.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sce7725 family protein"
                     /protein_id="HDC2863347.1"
                     /translation="MYYPYLRGKQNELFAIRELLEKGLIGDCIQPIIEPIKYTTTFKN
                     TLQYCGEKAFSINLVVNSKLTEEEISNETVAHLTEIITKNKSVIQKAYLGPSDEGNDR
                     LKQQFSSNSLAILTSVDDWEMFGDKNKLEMVFVPDDRHIKRKLRNIPNKGIIMDPFNK
                     LSRNVDYLDNDDEFYSDDHLYYKEDGYVAFSDYSVIGGEYVDGGFSPLAIAIHIVYFD
                     EANELRVKHFVSDSNNDRSNPGKKFFEAVDKLVTWSKNLDIKNRSYALGQFEELNENN
                     KYPGLGLIKRLSIMHHLEIMNRYLESQNENM"
     gene            21183..>21306
                     /locus_tag="O7798_001081"
     CDS             21183..>21306
                     /locus_tag="O7798_001081"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498763.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RES domain-containing protein"
                     /protein_id="HDC2863348.1"
                     /translation="MKICEKCFNNTEIVEIIANDNSKFDNCDIDNNHLGVKIFDT"
BASE COUNT         7205 a         3339 c         4002 g         6760 t
ORIGIN      
        1 ctgtattcaa aattgttaac gagatgaacg gtaaataaat gttttagcgc aatggataat
       61 cgaactggaa tcatctcgcg tgtcaaaact tgttaggcct taatttcata gttatgaatt
      121 aaggattgtt gtgccaacaa aatcattatt gtaaatagat tcaatgatat ttggcttgtt
      181 tcctgatgca atgataactt taggacagcc attttcaatc gcatttttgg catctagcac
      241 tttgggaatc atacctccat aaatatcacc atgttcaata tattgatgaa tatcgactaa
      301 tggcaattga ggtataacaa catcattgat gagtacacct gcaatattac ttaatacata
      361 aataggcgct tttaatgatg atgcaataaa ataggcaagc gtgtcagcat taatattgta
      421 aaattctcca tcatggttat tgaaaccaat cgaattgatg ataggtacaa atttagtaca
      481 taaatactgt aaagcatcct tatttaaagc ggtcggaaca ccgacatatc catattgttg
      541 atcaaaagat gtaatttcaa acagctgtgc atccaaacca cataagccta ttgcagaaca
      601 ttggtgctgg ttaaattgag ctactaatgc agtgttaacg tctgcaatga gcgtgtgttt
      661 agtaatggtc atggttgctt tatcagtcac tcttaggcca ttaacaaagt gtggctcgat
      721 ttgctggttt gataatgctt cattaataaa tgggccaccg ccatgaacga taatggggta
      781 gatgttgttt gatcgtaaat gcttaatgtt gttaataatt gatggatgca tgtcactaag
      841 tgtactgcca ccaattttaa tgacaataaa tttcatctaa ccaacaccac cttatgttcg
      901 atatgatgtg ttgatacgca cataatcata ggataaatca caaccgtatg cagtcgctgc
      961 agcgttacct aaaccaagct gaacgtcaat tgtgacattt tcatgagtta atgtattcga
     1021 catagcttgc tcatcaaata gtacagccat acctttatca acgacaggta tttggttcag
     1081 ttgaacatat gtgcagttag gatcaatttc acatccgctg tagccaatag ctgtaatgat
     1141 tcgaccaaaa ttggcatctt cgccaaaaat agctgatttt actagatttg aacttacgat
     1201 agttttaccg atttttcttg catctgatat tgatttagcg cctgacacat tgacgctgat
     1261 taactttgtt gcgccttcgc catctctggc tatagcttta gctaaaaatg tacagacaaa
     1321 attgaatgca tcaacaaatg tttcccattg tggatggtct tgactaagta tttggtgttc
     1381 aacttggtga tttgccatga ctaataccat gtcatttgta cttgtatcgc catcaacagt
     1441 aatcatatta aatgtatggt cagtcgaaga ttttaataat tgatgaagtg tattcgattc
     1501 aatcgatgca tcggttgtta taaaagcaag catggtagcc atatttgggt gaatcatacc
     1561 tgaacctttg gtgctaccac caattgtaac ggttttacca tcgattttta gtgatacagc
     1621 gatatgtttt gtacaggtat cagttgttaa aattgcctcg ttaaacgcac ctggcgttgc
     1681 aaaattagca tccttaatat gttcggtccc agtcttaatt ttatccatag gcaaatattc
     1741 accaatgacc ccagttgaag caacagcaac atgctcagat ggtatttgaa gttgttgagc
     1801 aacccatgtt tgtgtttgtc gtgcatcatc tatgccttgt tgaccggtac aagaatttgc
     1861 attagctgaa ttaacaacaa gtgcttgtaa ttttccttta gacttttgta aagtgtcttc
     1921 agtgacaata agtggtgcag ctttaaactg atttaaagta tatacggcag ctgcacttgc
     1981 caaagacgat gagtaaatcc acccaaagtc ttttttgtta gcgcgtaaac cgatgtgcat
     2041 accaccagcc gtgaagcctt gaggtgtact gatatcgcca tgtttaataa ttgaaaagtt
     2101 atattgttgt gatgtcgttt cttgatgttt cattctaaca ccccttatgg ataaactggt
     2161 gattgattta ggccagtcgt cacttcaaaa tcatataata tatttaaatt ttgaatggct
     2221 tgcccacttg cgcctttgac aaggttatca atcactgata ctaaaattgc tgtttgcgtt
     2281 gtttcatcta catagatgcc gatatcgcag tagttactac cgagtacttc ttttgtggtt
     2341 ggaaaagtcc caatatctct aattctgaca aatggctgat tagcataata agaggtcatt
     2401 aatttatgta atgattcagt cgtatattca gatgataatt tgacatatat tgttgataaa
     2461 atacctcgtg tcattggtac gagatgtggt gtaaatatga ctgatacatc ttgacccgca
     2521 atgatagata aatattgctc gatttccggt ttgtgtttat ggtttccgat tgcataagcg
     2581 cttagatttt cattcatttc tgaaaaatga acacgttgtg ataatgaacg accagcacct
     2641 gacacgccgg tcttagcatc aataataata gatgacaaat ctactatttt ttcgctaata
     2701 agtggatgta atgctaataa tgttgctgta gggaaacagc caggattaga aatgagcttc
     2761 gttccattgt tatcaaacga ttgccattct gaaatgctgt aaatagcatg attcaaatca
     2821 tcttgtgctg cagcagtttc tttgtaatat gcttcatata tttcacgatt cttaattcta
     2881 aatgcgccag ataaatcgat aacatgaata cctttttcta ctaagggagg gatacatgtt
     2941 ttacttacgg gtgctggtgt cgcaaagaaa attacatcac agtcattatt gtccactgta
     3001 agtgcttcga aatgttgcat aatatgttgt aaatgtggaa atgttaattt caacggttca
     3061 tctacttttg aatgtgagta gatgtgtgca atcgttacat gaggatgtgt ttgtaacaat
     3121 cgaattaatt caattgcgcc ataaccgcta ccgccaacga tacctacttt aatcatcatg
     3181 aatccctcct atgtcatata taaatgatta attgttaatt tttaaaaacg tcttgaaaag
     3241 ctgcaacaat ttgatggatt tcctctttat caatgactag aggtggagac aatcgaatga
     3301 tagtacgatg cgtgtctttg cataagattc cacgttgaat cagttgatcc acaaaaggtg
     3361 cagcatctgt gttaagctct atgcctataa ataaaccacg acctctaatt tctttaatac
     3421 taggatgttt aagttgtagc aacgctttta ataaaaatga acctaagcgt tctgatcgtt
     3481 caaccagttg ttcatcttta agtacatcaa gcgctgccgt cgatattgca atggctaaag
     3541 ggttaccacc aaatgttgaa ccatgtgtac ctggtgttag aacacgcatg acatcattat
     3601 ttgcaagtac agcagataca gggtataagc cgccacccaa tgccttacct aaaatataaa
     3661 tgtctggaac gacttgctcc cattccatag caaaccattt cccagttcta ccaagaccaa
     3721 cttgaatttc atctgcaatc aataatattt gatgtttatc acatagttga cgcacagctt
     3781 gaatatatcc tttcggtggt atattaacgc caccttcacc ttgaattggt tccaaaataa
     3841 ttgctgctgt attcggtgaa atagcttgtg ttaattgttc aatgtctcca aaatctactg
     3901 ttgtagtgcc ttgaagtagg gggtgaaatc ctgctttata tgcgtcgtgg ttagatagtg
     3961 ataatgagcc aagtgtacga ccgtgaaaat tgttattcat agcgatgatt tcaacttgtc
     4021 cgtcagtaat gcctttaact tcagagcccc attttctagc aattttaatg gctgcttcaa
     4081 cagcttcagt accagagtta agggggagta ctttgtcttt cttagcaaga tgacaaattt
     4141 tttcttccca tttcccgaga ttgtcactat aaaggacacg tgaaatgata gacaactttg
     4201 aagcttgttc tgtcatcgct ttaacaattg ttggatgaca atggccttgg tttgcaactg
     4261 aaaaacccga aatgcaatct atatattgtt tgccatcagt atcccaaact ttgacacctt
     4321 tacctttaga aatgacaagc ttaagtggtg cataattatt agagctataa taatcagtta
     4381 attcaatgat tgaattcatc ggtctccctc ctttatattt atacatttta aagaattaat
     4441 attaatatat tacagttgtt caatataagt gtcaaatgta aatttaataa tataaagata
     4501 aggttgtgtt tgtattaatg tgatttgtaa aatgaaagta ctaatatttt ttgtggataa
     4561 tcattgatat gtatgtatac gattgcagtt taatgtagta tgaataaaaa atgccacaag
     4621 catatgttta acatatgact gtggcatagt attatgcttg tggaatttta cgatgcttaa
     4681 ttttataaat aatgaagccg ataatgaaac caatcaaact gagaacaacc cagcccatac
     4741 caatgtctga taatggtaaa tatttttggc tgaaattaat caaagtttgt gagaatgatg
     4801 tgcttgaaat gaactctgga ctagctttta atccatctac taatgcagca atcattgtaa
     4861 agaaaatggt acattgataa ataagttttg aatgatggaa tttgctacta aataatgtta
     4921 gtacaatcaa ggcaattgct aatggatata agaacattaa cactgggact gagtacataa
     4981 taatcttagt taaaccaaca ttcgcgaata agaacgaaat aaagcttaca actgttgcaa
     5041 tcgctaggta attcatttta gggaaaaggt gttcgaatgt ttctgaaaat gccgtaatca
     5101 aaccgatggc tgtttttaaa caagcaacca taacgataag tgacaacagg acgataccgt
     5161 agttacctaa gtagtattga gtaatttgcg ctaaggcaat accaccattt tcactaagtt
     5221 tgaaatgacc aatacttaat gtacccatga ttgctagtag ggtataaatg atccccatca
     5281 taatgatact gatagtacca gacttaattg tttctttagc gatatcagtt ggattttcga
     5341 tacctaactt tttaatcgtt gcaacaatga taataccaaa tgccaatgac gctagcgcat
     5401 ctaaggtatt gtatccatct aaaaagccgt taaataaggc atgtgattga tattgtttac
     5461 taataggtgc atcagatatg ccacctaatg gatggataaa agcaaataat aaaataattg
     5521 ctaataatac taagaatacc ggatttaaaa atttaccgat atattctaaa attcttgatg
     5581 gctttctcgc aaaaaaccat gcaatcacaa agaagacgaa gctaaaaata aataaatata
     5641 aagtgatttg ctttggtgat aaaaatggcg aaaatgcaat ttcaaatgat gtcgttgcca
     5701 gtctaggtaa ggcgaaaaat ggtccgataa ctagatataa ggcaatcgtg aaaatgtaag
     5761 catatgtttt attaacacgc gatgcaattt caaataaacc agatgtcttt gaaatgccaa
     5821 tagcaatgat acctagaaat ggtaagccaa ttgctgtaat taaaaatcct aagttagcga
     5881 taaaaacgtt agaaccagca gcttgaccca agtgtattgg gaagataaga ttgccggcac
     5941 caaagaataa accaaataac atagaaccta taaacatgtt ttctttaaat gttagtttct
     6001 tcttcatata tgtatttgtt ctccttttta gaacttataa aaatctactt aattaagata
     6061 atatcaaaaa ttaaacataa agtgatacat aattttgcaa taaatactaa attttttgaa
     6121 aattccggaa taaatactgt tttttatgta gtaggggcgt aagttaagaa cgatttaaca
     6181 gatatagaat atgttaaata tagaaggtta gacaacccga cgtattaata ctttgtgaaa
     6241 taaagatccc cctcaacatg atcgaagggg ggaagtatat gtttagttca atatatttag
     6301 aaagtcgttt gtagttattg tttgtcccat caatgggaat acattatcta ttggaaattg
     6361 atgtagcgtt tcgttttgtg cactcatcat atctgtaaca aaaaactgat tgtagtttaa
     6421 ttgataggca tctcgcgctg tcgtatctac gccaatatgc gttgcgacac caccaagaac
     6481 aatcgtatca attcctcgac gtcgcaattg taagtccaaa tctgttccta caaatgcact
     6541 aaaatgtcgt ttgtctatga caaaatcgtc atctctcttg tctaataaat gatggaaacg
     6601 actgtagtcg tcgccttctt ttggtggtaa tgagatcatt gcatttggtt gcaatacatc
     6661 tttaccatca tagaaattca cgcgaacaaa agcgataaag ccattgtttt ttctaaaaac
     6721 atctattaat ttattagcgt tttgaacgac attttcagct gtatatgggg cataatccat
     6781 tttaagaata ccttcttgca ggtcgattaa cactaaagcg gttttattaa aattaatcat
     6841 cttatatcag agtcctattc gtttaataaa gtattcgctt aaacttatac cctgtatacg
     6901 atgaaattat ttattttgtt gtgaaaaagc tttagcgata tcgatgagtt tcttcggtgc
     6961 gtcttcgaca gccattttga cttcgacaaa atgcatcaca tcgggatgac cattaattgc
     7021 attaaacgtg tcttgtaaat cttttgatga ttcaacgtca tgaatttcaa catttttacc
     7081 accaaataca gctggtaaag ctttataatc ccacatgtga atttcattat aaggttcata
     7141 catgccgtga ataagtcgtt ctaccgtata gccgtcatta ttaatcacaa ataataccgg
     7201 tttaatatgc tgtctaatca tagttgaaat agcttgaaca gttagttgca atgagccatc
     7261 accaattaat aataagttac gacgatcttt gtctgctaat tgtgaaccta atgttgcagg
     7321 taatgtatag ccgatagaac cccataacgg ttgccctata aaagtattgt ttttgtataa
     7381 tgctaaatca taagcaccaa agaatgatgt accttgatca gcaatgatga catcatttgg
     7441 ttttaagaaa ttttgcatca ttttaaaata agtttgttgt gttaatggtt ctgtgccaac
     7501 agtataatcg ggtgatgttg gacgatgata cgcagggaac gttgcgttat tcgtatatga
     7561 aatattggat aactgtttta acaatgatgg tagagatatt tcatcatttg taacatcgtc
     7621 aattttgata ttgtgatgat ttaacataac gacatcatcg atattgaatt ggtatgaaaa
     7681 acctgctgtt gctgaatctg ttaatttggc tccaatattt aaaattaaat cgctgttgtc
     7741 cacataatct cgtattttat cttcggcaat tttcccatcg taaataccca tataatatgg
     7801 attttcctca ttaaaagcac cttttcctaa tgaaagttgt gctactggta tctgtgtttg
     7861 atttacaaaa tcttctaatt cttgatggag gtgaaaactg ttaatttcat gtccagtaat
     7921 gatgataggc tgcttcgctt gatgcagttt agttgctaat aactctatat atgttgatgc
     7981 atccgtatat ttagttgccg tcacttcaaa tggtgtcggt atctcaattt cagagattgc
     8041 gacatcgatt ggtaaatgta aatgaactgg gcgtctttcg gcgattgctg tattaattaa
     8101 acgtggtatt tcggttgttg cattttcagg tgtgatataa ccttgtgcaa cggttatatg
     8161 tgcaaacatt tttcgatagt cgtcaaatgt accttcacca agtgagtgat gtacatattt
     8221 accgccttgt tcaacagcac gtgtcggcgc acctgtaatc gcaatgacag gtatgcgttc
     8281 agcatatgaa cctgcgatac cgttgacggc acttaattcg ccaacaccaa atgtagtaac
     8341 taatgcagcg agtccattaa gacgggcata accgtccgct gcgtaacttg cgtttaattc
     8401 atttgtattt cctacccaat ctacattggg attgctgata atatcgtcta gaaaagcgag
     8461 attaaaatca ccaggaacac caaaaatttt atcgacgcct gctcgatgaa tagcgtcaat
     8521 taagtaagct ccaatgcgtt gtttcataaa aaaagccacc ttttctctat atttacactt
     8581 aaaatgatag cctcgaatat agtgtaaggt caaggaagtt gactttgttg tgaaaacgct
     8641 aacaatagtg aacaattaat attttttagg aaatgagtat gaaggggggc tttaattgat
     8701 gatcttaaaa ttcaaaattt aaggggagag cgaactatca atgatgctgc aaaatacaat
     8761 agcaaagaaa aaacaggcgc gtcaccttat gaaggtatac gcacctgttt atagtaagca
     8821 ttatttagct tcaaataatt gatcgccaaa tgaaatgttg ccatgttcac cttgtttaaa
     8881 atcaaggttt gtaatgtttc cttgtgtcac gataataggc gtaatatcac tctttgcatg
     8941 attgcggatg tagtctaaat caaagttgat taataaatca ccttgtttaa cttcttgacc
     9001 ttcctcaaca tgtaaagtaa agccttctcc gtttaattta acagtgtcta aaccgatgtg
     9061 gattaatagt tctaaaccac tatctgatac aagaccaatt gcatgttttg ttgggaaaat
     9121 catttgtact ttaccgttga atggtgcacg aacttcacct tgtgaaggtt tgatagcgat
     9181 accgtcaccc atcatttttt cgctgaacac ttgatcaggc acttctgata atggtgttac
     9241 ttcaccagtt aatggtgcat gcacgatatg gctcaattcg cttgttgcag atttatcttc
     9301 tgcaacaaca acagtttcgt ctttatcgtc ttccatagta gtaggatttt ctactacttg
     9361 accattcata atctgttgca tttcatgttt gatttggtca gatttaggac caaaaattgc
     9421 ttgcatatta ttgccgactt ctaatacacc agatgcgcct aaatctttca aaccaggaac
     9481 atcaacttta gatttgtcgt taacttcaac acgtagacgt gtgatacaag cgtctaaatg
     9541 tttaatgttt gctttgccac ccatagcttc taatactgca tatggtaatt cagttgctga
     9601 agcagtagcc gcttgtgatt gtttatcttc acgacctggt gttttgtatt ttaattttac
     9661 aattaagaat cggaatacga agtagtaaat aactgcgtat acaagaccta caggaatgac
     9721 taaccaccat tgtgtcttat taggtagtat accgagtaag aagtagtcga tgaaaccacc
     9781 tgagaatgta taacctagat gaagatctaa taagtacaat gttaagaatg ataaaccatc
     9841 aagtactgcg tgaataaaga ataataatgg tgctacaaat aagaatgaga attctaatgg
     9901 ttctgtaata ccagttaaga atgatgttaa agcagcagaa cccattaaac ctgctactac
     9961 tttcttattt tcaggtttag ctgtgtgata aattgctaaa gctgctgcag gtaaaccgaa
    10021 catcataaca gggaattcac cttgcatgaa tttaccagct gtcaaatgtg cgccttcacg
    10081 aatttgttcg ataaagatac gttggtcacc gtgaataatt tcaccagctg catttttcca
    10141 tgaaccaaac tcgaaccaga acggtgcgtg gaaaatgtga tgtagaccga atggaattaa
    10201 taaacgcttg atgaaaccaa ataagaatac ggcaacacca gtatttgaat ctaataatcc
    10261 tgtactgaat gcatttaatc ctgattgaat cgttggccaa attaatgcca ttgggaatgc
    10321 taaaataaat gatgttgtag ccatcataat aggtacgaaa cgcttaccag cgaagaaacc
    10381 taaataagat ggtaagttaa tgttatagaa cttgttataa caccaagctg ccagggcccc
    10441 gattataata ccgccgaaca cacctgtttg taatgttggg atacctaaaa tgctagcgta
    10501 accactcgct ggatcaccaa tattcttagg tgtaacttgt aaaaagtcgc ccattgtttt
    10561 gttcatgatt atgtaaccga cgaatgctgc gatagctgct acgccatcac cgccagctaa
    10621 tccgattgcg acacctaatg cgaaaatcat aggcaagtta tcaaaaatga taccaccagc
    10681 acctgtcatt aatttagcga cagtttgtac gccaccattt tgtataaacg gcaagtagtg
    10741 ttgtaatgat tcaccttgca tagctgtacc gatagctaat aacagaccag ctgctggtaa
    10801 aatcgcaaca ggtaacatta gcgctttacc aatacgttgc aattgaccga aaagtttctt
    10861 cctcacttgt ccaacctcca aagttgtatt tattatttaa gattcaataa aaaaagacac
    10921 gagcaaatag actgtgttgg taaccatcac agcttaattt aactcatgcc taatcttact
    10981 tagtaacacg ttggtgtatg taattaatgt aaaagaagca attgactaag tagtatataa
    11041 aactgatacg ttagtttatc tagcttacca tcacatctta ttgaatctta tttgtttgcg
    11101 actcctattt tagcatggtg aagtatgcgt tttcaataca attattaaat tcaatttcaa
    11161 atctcttaat tgttcacaga ttattattaa aacataatat aagataatcc tgaataaaat
    11221 gtataaaagt tattgtaata atccagcagt agcagctatt atcagcactt aaaagaaagg
    11281 ataatctttg atggtgtaat aattaacttg tgacagaaat atgtaagatt attacaatga
    11341 acaggcttta actgattaat attgtaatgt gttttctctt atagtaaaat gtaagcgatt
    11401 acacaactca actatatttt cctaataatt atattgttaa ggagggctac tttgacaggc
    11461 ttttcagtgt atttaggaca acctttagat gaagcgtata ttaagcgaat gattaaacaa
    11521 ggttaccaaa tgatttttac atctgtacaa ataccagaag aagatgacga gacaaaatat
    11581 cattatttca caaaactact caatttatta aaacatgaac aagtgactta cctcatagat
    11641 gctaatccat ctattttaac accatctttt tatgaccatc ttcgacaata tgatgcacaa
    11701 tttatgattc gtatcgatca tagtacatca attgaggcaa tcgaagcgat aatggcacag
    11761 ggtttaaagt gctgtttgaa tgcaagtatt atttcccggg aattgttaac aagcttacat
    11821 caacaattga atgattttac attactttca ttttgtcata actattatcc aagaccagat
    11881 acgggattat ctgttgactt ggtcaataag aaaaatgaac tcatttatca atttaatcca
    11941 aaggcacaaa tatatggttt tattgtaggg agtgatttgc gaggtccttt gcataaaggc
    12001 ttgccaacaa ttgaagcaac gagacatagt catcctgtcg ttgcagctaa attattacaa
    12061 gaaactggtg tatctgaagt gttagttgga gactcattga ttgaaatgag gcaggcaaaa
    12121 caacttatag atttttgcaa gcataggcat ttcacgttat gtattgaaga agtgtttgat
    12181 acgacagtga cttacctttt cgatatgtgt cataaagtac gcccggataa tccggaaaat
    12241 gtcattcgtt cggaaacgtc aagacaaata tgtccacatt cgattcaacc acagtttacg
    12301 acgcaacgac gcattggttc agtaaccgtt gataatttga ataacggacg ttatcaaggc
    12361 gaaatgcaaa ttgtgagaca aacgcttagt gcacatgaca atgtgaatgt tgttgcacaa
    12421 attattaaag aagacttacc actgttaagt tgtatcgagc cgaatgatac atttgatttt
    12481 caaaaaacta gggagtgtaa gaggtgatgg aaaatagtac gaccgaagcg cgtaatgaag
    12541 cgacgatgca tcttgatgaa atgactgtgg aagaggcttt aattacgatg aataaagaag
    12601 atcagcaagt cccgttagca gttcgaaagg caataccaca attgacaaaa gtaattaaaa
    12661 aaacaattgc acagtataaa aagggtggac gattgattta tatcggtgca ggtacaagtg
    12721 gaaggttggg tgtcttagat gcagcggagt gtgtacctac attcaatact gaccctcatg
    12781 aaattatagg tattattgct ggtggacaac atgctatgac gatggctgta gaaggtgcgg
    12841 aagatcacaa aaaattagcg gaagaagatt tgaaaaatat agatttaaca tcaaaagatg
    12901 tcgttatagg aattgccgcg agtggcaaaa cgccatatgt tataggcggt ttaacatttg
    12961 ctaacacaat cggtgctaca acagtatcta tttcatgcaa tgaacatgca gttataagtg
    13021 aaattgcgca gtatccagta gaagttaaag ttggtccaga agtattaact ggttcaacac
    13081 gtttaaagtc tggtacagca caaaagttaa ttttaaatat gatttcaacc atcacaatgg
    13141 ttggtgtcgg aaaagtttac gataacctca tgattgatgt taaagcaacc aatcaaaaac
    13201 tgatcgaccg ttcagtgcgt attattcaag aaatatgtgc tatcacatat gatgaagcaa
    13261 tggcgttata tcaggtatct gagcatgatg tgaaagttgc gacagttatg ggtatgtgtg
    13321 gcatttctaa ggaagaagca acaagacggt tattaaacaa tggtgacatt gttaaacgag
    13381 caatcagaga tagacaacct taggagggat ttaaatgacc aaagaacaac aacttgcaga
    13441 acgaattatt gctgcagtag gtggtatgga taatatagat agtgtcatga actgtatgac
    13501 acgtgtgcgt attaaagtat tagatgagaa taaagtagat gaccaagaac taaggcatat
    13561 tgatggtgtc atgggtgtta tacacgatga acgcattcaa gttgtggttg gacctggtac
    13621 agtcaataaa gtggctaatc atatggcgga attaagtggt gttaaactag gtgacccaat
    13681 accacaccat cacaatgata gtgaaaaaat ggactataaa tcatatgcag ctgataaagc
    13741 aaaggcgaat aaggaagcgc ataaagcaaa acaaaagaat ggtaagttga ataaagtatt
    13801 gaaatcaatt gccaatatct ttataccgtt gattcctgca tttattggag ctggattaat
    13861 tggtggtatt gcagcagtac tgagtaactt aatggtggca ggctatattt caggtgcttg
    13921 gattacgcaa cttataacag tatttaatgt cattaaagac ggtatgttag catacttagc
    13981 tattttcact ggtattaatg cggctaaaga atttggtgcg acaccaggac ttggtggcgt
    14041 gattggtggt acaacgttat taacgggtat tgctggtaaa aatattttaa tgaatgtctt
    14101 cactggagaa ccattgcaac ctggacaagg tgggattatt ggcgttattt ttgccgtttg
    14161 gattttaagt attgtcgaaa agagattaca taaaattgtg ccaaatgcga ttgatattat
    14221 tgtaacgccg actattgcat tgttgattgt aggactatta actatcttta tctttatgcc
    14281 attagcaggt tttgtttcag acagtttagt ttcagtagtt aacggaatta ttagtattgg
    14341 tggcgtattt agtggattta tcattggtgc aagcttccta ccgttagtta tgttagggct
    14401 tcatcatatt tttacgccaa ttcatataga aatgattaac caatcaggtg ctacttactt
    14461 attgccaatt gcagcgatgg ctggtgctgg acaagtaggt gccgcattag cactttgggt
    14521 aagatgtaaa cgcaacacaa cattacgtaa tactttaaaa ggtgcattgc cagttggttt
    14581 cctaggtatc ggagaaccat taatctatgg tgtgactttg ccattaggtc gacctttctt
    14641 aactgcttgt attggtggtg gtattggtgg cgctgtaata ggtggaattg gacatattgg
    14701 tgccaaagca ataggcccaa gtggtgtgtc actattacca ttaatctcag ataatatgta
    14761 tttaggttat attgcaggat tacttgctgc gtatgctggt ggattcgttt gtacatattt
    14821 atttggaacg acaaaggcga tgcgacagac agatttgttg ggtgattaat gatgacaaat
    14881 attttatatc gcattgataa gcagttgagt gattttacga agacagaaaa gataatcgct
    14941 gattacattt taaagaatcc acataaaatc attgatatga ctgtgaatga tttggcagat
    15001 gttacgaatg ttagtacagc atcaattgtt agatttagtc ggaaaatgac acatcaaggt
    15061 tttcaagagc taaagattgc gatatctcga tacttacccg aagatattgc aaccaatcca
    15121 catttagaat tgattgaaaa tgaatctgta gaaactttga aaaataaaat gattgctaga
    15181 gcaacgaata cgatgcgatt tgtagctact aatattatgg atgcgcaaat tgatgcaatt
    15241 tgtgatgtgt tgaaaaatgc caggacaata tttttatttg gatttggcgc atcgagtttg
    15301 actattggtg atctttttca aaagttatct cgtattggct taaatgtcag gttattacat
    15361 gaaacgcatt tacttgtgtc aacatttgcg acgcatgatg atagagattg catgattttt
    15421 gtgacgaatc aaggtagtca tagtgaattg cagtcaattg cacaggtggc cacacattac
    15481 agtattccca tcataactat atctagtaca gctaataatc cagtggctca aattgcagac
    15541 tatgcattga tttatggcag aactgatgaa aatgaaatgc gtatggcggc tacaacgtca
    15601 ctatttgcac agttattcac ggtagatata ttgtactatc gatttgtagc attaaattat
    15661 catgcgattc tagattgtat aacccaatcg aaaatggcac ttgataatta caggaagcat
    15721 cttgcgacga tagattttaa acattagata ttgtgtgcgt tctaacataa agttagttgc
    15781 aacgtaaaca attgaagttt ttgatgtgat tcagttgctt gatgaaaaat tgttgctaca
    15841 agtttgtaaa actggcatag aggctatttt gaaaatgata aaggcgtgac aaattaaagc
    15901 aaagttcaga tttgagcttt gcttttttca tagatggaaa ttaaatgctg aagaataatt
    15961 ttaatgctaa atgaactaat acgaaggtgc taaaagcaat tattatcaaa ttagtgatat
    16021 gaatgaaatg tttaaatcgt ttgcgttgat tgtattcggg acttttatag agtaggtagt
    16081 agtacataaa gagtatggct gcgaacatgc cgaatattga agtgaagtta cctacagtga
    16141 ctgccatgta atgatttaaa gttaaatagt aacttagact aataataaaa aataaaatga
    16201 tttgataggt aattaacacc attcaagtcc ctccattaat cgtagacaaa aaatttatca
    16261 atgatttgat tatttgtatt caaattttag tatacgactt acctcaaaga caaatattaa
    16321 aagataagac aataaaatta gaataaattt acgtttgaag ataaaaaaca aacatttttc
    16381 attaaagttt atgatatatt tagagcaata gaaagtgtat ggaaggggat atgaatggca
    16441 taccaaagtg aatacgcatt agaaaatgaa atgatgaatc aacttgaaca attgggttac
    16501 gaaagagtaa cgatacgtga taataagcaa ttgcttgata attttagaac gattttaaat
    16561 gagcgtcatg cggacaaatt agaaggcaat cccttaacag ataaagaatt tcaacgtctg
    16621 ttaacgatga ttgatggaaa aagtattttc gagagtgccc gtattttacg tgataaatta
    16681 ccacttagac gtgatgatga gtctgagatt tatttgtcgt ttttagatac gaaaagttgg
    16741 tgtaaaaata agtttcaagt gacgaatcaa gtatctgtcg aggatacata taaagcacgt
    16801 tatgatgtaa cgatattaat caacggacta ccccttgtcc aagttgaatt gaaacgtcga
    16861 ggtattgata ttaatgaggc gtttaaccaa gtaaaacgtt accgcaaaca aaattacaca
    16921 ggcttattcc gctacataca aatgtttatc attagtaatg gtgttgaaac gcgatacttt
    16981 tctaataatg atagcgaact attgaagagt cacatgtttt attggagtga taaacagaat
    17041 aaccgtatca atacattgca atcgtttgct gagtcattta tgagaccttg tcaattagct
    17101 aagatgatat cgcgctatat gattattaat gaaacagata gaatactgat ggcaatgcgt
    17161 ccgtatcaag tgtatgcggt agaagcactt attcaacaag cgactgagac agggaataat
    17221 ggatatgtat ggcatacaac tggaagtggt aagacgttga cttcttttaa agcgagtcag
    17281 attttatcac agcaagatga cattaagaaa gttatctttt tggttgaccg taaagacttg
    17341 gatagtcaaa cagaagagga atttaataaa tttgctaagg gtgctgtaga caaaactttt
    17401 aatacctcgc aactggtacg ccaactaaat gataaaagtt tgccacttat tgtaacgacg
    17461 attcaaaaaa tggctaaagc gattcaaggg aatgcccctt tattagaaca gtataaaacg
    17521 aataaagttg tatttattat tgatgagtgt catcgcagtc aatttggtga catgcatcgt
    17581 ctagttaaac aacatttcaa aaatgcccaa tactttggat tcactggtac gccacgtttt
    17641 ccagaaaata gtagtcaaga tggtagaaca actgcagata ttttcggtag atgcttacat
    17701 acgtatttaa ttagagatgc cattcatgat ggtaatgtac ttggtttctc agttgactat
    17761 attaatactt ttaaaaataa agctttaaaa gcagaagata acagcatggt tgaagcaatt
    17821 gatacggaag aagtatggtt agcggataaa cgtgtggaat tagtaacacg acatatcatc
    17881 aataatcatg ataaatatac acgtaatcgt caatattcaa gtatatttac agtccaaagt
    17941 attcacgcgc ttattaaata ttatgagaca tttaagcgac ttaacaaaaa gttggaacaa
    18001 ccgttaacga tagctggtat atttacgttt aaacctaatg aagatgatcg tgatggtgaa
    18061 gtgccatatc attcacgtga aaaattagag ataatgatta gtgattataa taaaaagttc
    18121 gagacgaatt tttcaacaga cacaactaat gagtatttta atcatatttc aaaaaacgtt
    18181 aaaaagggcg ttaaagatag taaaattgat atcttaatcg ttgttaatat gttcttaact
    18241 ggttttgata gtaaagtact gaacacttta tatgttgata agaatttaat gtatcatgat
    18301 ttaattcaag cgtattcacg tacaaatagg gttgaaaaag aatcaaagcc atttggtaaa
    18361 attgtaaact atcgtgactt gaaaaaagag acagacgatg cactgagagt attctcacaa
    18421 acaaatgata cggatacaat tttaatgcgc agttatgaag agtataaaaa agaatttatg
    18481 gacgcttatc gtgagcttaa aatgattgtg ccgacaccac acatggttga tgacattcaa
    18541 gatgaagaag agctaaagcg ctttgttgaa gcttatcgtt tattagctaa aataatatta
    18601 cgtttaaaag catttgacga gtttgagttt acaattgatg aaattggaat ggatgaacaa
    18661 gagaatgaag actataaaag taaatattta gctgtgtacg atcaagtaaa aagagcgacg
    18721 gctgagaaaa ataaagtatc cattttaaat gatattgatt tcgaaataga aatgatgcgt
    18781 aatgatacga ttaatgtgaa ttatattatg aatatattga gacaaattga tcttgaagac
    18841 aaagcggaac aacgtcgtaa ccaagaacaa attagacgca ttttagatca tgcagatgat
    18901 ccgacattga ggttaaaacg agatctaatt agagaattca tcgacaatgt tgtaccttct
    18961 ttaaataagg atgatgatat cgatcaagaa tatgttaatt tcgaaagtat taaaaaagaa
    19021 gcggagttca aaggatttgc tggagagaga tctatcgatg aacaagccct aaaaacaatt
    19081 tcaaatgact accagtatag tggtgttgta aacccacatc accttaaaaa aatgattggt
    19141 gatttgccat tgaaagaaaa gcgtaaagca agaaaagcca ttgaatcttt cgtggcagaa
    19201 acaactgaaa aatacggtgt gtaatgattc agccccctcg ctagattagt gtagggggca
    19261 ttattatttt ctatcttttg ttagttacca tgtgtttggc aaccatcatt tggtttcaat
    19321 acaattttat aatcgtatgt gtatagaaat aatgtctata ggcatttaaa atagtttata
    19381 atattaacag gataagtatt aaatgtatgt tgaaggaggt gcgtagctat ggataataga
    19441 aatatgatta atcgtgtttt tagtcaaaag atattacatc aaattgcaat caaaaataaa
    19501 agtgatgttg ttgatgaggc atatgatttt tatatacagg gacctaaaaa tatcaatgta
    19561 atacagaaga tgaaatcttt atataactat cttaaaaagt cttatcgtaa cgaatatttt
    19621 tacaaaaaca caatacttaa taaactcctt ctaggacgac attctattaa tacaactact
    19681 gcactttctg agatgcccat agggaaaagt attgctgatt ttatattgtt aaacggcaaa
    19741 ggcgttgtct atgagattaa aacagaatta gataagctgg atagattaga taatcaaatt
    19801 aatgattatt atgaagtgtt taattatgtc gtagttatta caaatgacaa acatctgaat
    19861 aaagttatgg ctagatacaa agatacaaca gttggaattt tagtgttaac aactagaaat
    19921 acactgagtg aagttcaaaa acctaaagaa aacaatagtc tcttaaacac aaaagcgatg
    19981 tacaactttt tacgaaaaga agaaagaaaa agagttattg cacaaaatca tatggatgtg
    20041 ccaacttata atgatttcac agagtatgat gtgttatttg acgtgtttaa agaaatacca
    20101 atgacgaaac tgcataacaa tatgatttct gagttgaaaa aaagaggaaa catgaaagaa
    20161 tacaaagatg aatttttagc agcgccggct gaaattaagt tcttgttata tttcgcaaaa
    20221 atgacaaaga aagataaaaa taaactatat cattttctta aggaggatta atatgtatta
    20281 tccttatttg cgtgggaaac aaaatgaact atttgcaatt agagaattgt tagagaaagg
    20341 tttgattggt gattgtattc aacctataat tgaaccaatt aaatatacaa ccacatttaa
    20401 aaatactttg caatactgtg gtgaaaaagc attctctata aatttagtag taaattcaaa
    20461 gttaactgaa gaagagatta gtaacgaaac tgttgcacat ttaactgaaa taataacaaa
    20521 aaacaaaagt gttattcaaa aagcttactt gggtccttct gatgaaggca atgataggtt
    20581 gaaacagcaa ttttcaagta atagtttagc tattttaaca agtgtagatg attgggaaat
    20641 gtttggagat aaaaataaac ttgaaatggt ttttgtacca gatgatagac acattaaacg
    20701 taaattgcgt aatattccaa acaaaggcat cattatggat ccttttaata aactaagtcg
    20761 taatgttgat tatttagata atgatgacga gttttatagc gacgatcacc tttattataa
    20821 ggaagatgga tacgtagcat tttcagacta ttctgttata ggtggagaat atgtagacgg
    20881 tggcttttcg ccattagcta ttgcgataca tattgtctat tttgatgagg ctaatgagct
    20941 aagagttaag cattttgtct ctgattctaa taatgataga tcaaatccag gtaaaaagtt
    21001 ttttgaggct gtagataaat tagtaacatg gtcaaaaaac ttagatatta aaaatagatc
    21061 ttatgcgctt ggacaatttg aagaattaaa tgaaaataat aagtatccag gattaggttt
    21121 aattaaaagg ttatctatca tgcatcacct agaaattatg aatagatact tggagtctca
    21181 aaatgaaaat atgtgaaaaa tgttttaata atactgaaat cgtagaaatc attgcaaatg
    21241 ataatagcaa atttgacaat tgtgatattg ataacaatca tcttggtgtt aaaatatttg
    21301 atacga
//
LOCUS       DALPQQ010000034        20700 bp    DNA     linear   BCT 22-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus strain K18-6-464
            SAMD00233528-rid16434743.denovo.034, whole genome shotgun sequence.
ACCESSION   DALPQQ010000034 DALPQQ010000000
VERSION     DALPQQ010000034.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMD00233528
            Sequence Read Archive: DRR236061
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 20700)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 20700)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001543423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001543423.1
            Genome Coverage       :: 77x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/22/2022 17:09:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,811
            CDSs (total)                      :: 2,743
            Genes (coding)                    :: 2,689
            CDSs (with protein)               :: 2,689
            Genes (RNA)                       :: 68
            rRNAs                             :: 2, 4, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 4, 2 (16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 54
            CDSs (without protein)            :: 54
            Pseudo Genes (ambiguous residues) :: 0 of 54
            Pseudo Genes (frameshifted)       :: 27 of 54
            Pseudo Genes (incomplete)         :: 27 of 54
            Pseudo Genes (internal stop)      :: 10 of 54
            Pseudo Genes (multiple problems)  :: 10 of 54
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..20700
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMD00233528-rid16434743.denovo.034"
                     /strain="K18-6-464"
                     /db_xref="taxon:1280"
                     /geo_loc_name="Japan: Niigata"
     gene            79..1806
                     /locus_tag="O7798_001082"
     CDS             79..1806
                     /locus_tag="O7798_001082"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499207.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HDC2863349.1"
                     /translation="MKRENPLFFLFKKLSWPVGLIVAAITISSLGSLSGLLVPLFTGR
                     IVDKFSVSHINWNLIALFGGIFVINALLSGLGLYLLSKIGEKIIYAIRSVLWEHIIQL
                     KMPFFDKNESGQLMSRLTDDTKVINEFISQKLPNLLPSIVTLVGSLIMLFILDWKMTL
                     LTFITIPIFVLIMIPLGRIMQKISTSTQSEIANFSGLLGRVLTEMRLVKISNTERLEL
                     DNAHKNLNEIYKLGLKQAKIAAVVQPISGIVMLLTIAIILGFGALEIATGAITAGTLI
                     AMIFYVIQLSMPLINLSTLVTDYKKAVGASSRIYEIMQEPIEPTEALEDSENVLIDDG
                     VLSFEHVDFKYDVKKILDDVSFQIPQGQVSAFVGPSGSGKSTIFNLIERMYEIESGDI
                     KYGLESVYDIPLSKWRRKIGYVMQSNSMMSGTIRDNILYGINRHVSDEELINYAKLAN
                     CHDFIMQFDEGYDTLVGERGLKLSGGQRQRIDIARSFVKNPDILLLDEATANLDSESE
                     LKIQEALETLMEGRTTIVIAHRLSTIKKAGQIIFLDKGQVTGKGTHSELMASHAKYKN
                     FVVSQKLTD"
     gene            2165..3394
                     /locus_tag="O7798_001083"
     CDS             2165..3394
                     /locus_tag="O7798_001083"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499208.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NupC/NupG family nucleoside CNT transporter"
                     /protein_id="HDC2863350.1"
                     /translation="MFLLINIIGLIVFLGIAVLFSRDRKNIQWQSIGILVVLNLFLAW
                     FFIYFDWGQKAVRGAANGIAWVVQSAHAGTGFAFASLTNVKMMDMAVAALFPILLIVP
                     LFDILMYFNILPKIIGGIGWLLAKVTRQPKFESFFGIEMMFLGNTEALAVSSEQLKRM
                     NEMRVLTIAMMSMSSVSGAIVGAYVQMVPGELVLTAIPLNIVNAIIVSCLLNPVSVEE
                     KEDIIYSLKNNEVERQPFFSFLGDSVLAAGKLVLIIIAFVISFVALADLFDRFINLIT
                     GLIAGWIGIKGSFGLNQILGVFMYPFALLLGLPYDEAWLVAQQMAKKIVTNEFVVMGE
                     ISKDIASYTPHHRAVITTFLISFANFSTIGMIIGTLKGIVDKKTSDFVSKYVPMMLLS
                     GILVSLLTAAFVGLFAW"
     gene            3649..3741
                     /locus_tag="O7798_001084"
     CDS             3649..3741
                     /locus_tag="O7798_001084"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499209.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDC2863351.1"
                     /translation="MFCYYKQHKGDNFSIEEVKNIIADNEMKVN"
     gene            3919..4752
                     /locus_tag="O7798_001085"
     CDS             3919..4752
                     /locus_tag="O7798_001085"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499210.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YitT family protein"
                     /protein_id="HDC2863352.1"
                     /translation="MNKTVKDLILVVLGSFIFAAGVNAFIISGNLGEGGVTGLAIILY
                     YAFHISPAITNFLVNAVLIAIGYKFLSKRSMYLTILVTILISIFLSLTESWQVETGNS
                     IVNAIFGGVSVGLGIGVIILAGGTTAGTTILARIATKYLDVSTPYALLFFDMIVVAIS
                     LTVIPLDKVLVTVISLYIGTKVMEYVIEGLNTKKAMTIISTNPDKLAKAIDEQIGRGL
                     TILNGHGYYTREEKDVLYVVISKTQVSKAKRLIKQIDKDAFLVIHDVRDVYGNGFLAD
                     E"
     gene            5034..5831
                     /locus_tag="O7798_001086"
     CDS             5034..5831
                     /locus_tag="O7798_001086"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499211.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HDC2863353.1"
                     /translation="MNRLHGQQVKIGYGDNTIINKLDVEIPDGKVTSIIGPNGCGKST
                     LLKALSRLLAVKEGEVFLDGENIHTQSTKEIAKKIAILPQSPEVADGLTVGELVSYGR
                     FPHQKGFGRLTAEDKKEIDWAMEVTGTDTFRHRSINDLSGGQRQRVWIAMALAQRTDI
                     IFLDEPTTYLDICHQLEILELVQKLNQEQGCTIVMVLHDINQAIRFSDHLIAMKEGDI
                     IATGSTEDVLTQEILEKVFNIDVVLSKDPKTGKPLLVTYDLCRRAYS"
     gene            5867..6871
                     /locus_tag="O7798_001087"
     CDS             5867..6871
                     /locus_tag="O7798_001087"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499212.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron ABC transporter permease"
                     /protein_id="HDC2863354.1"
                     /translation="MTNRENPTPLKFLSYIIGLSMILLITLFISTLIGDAKIQASTII
                     EAIFNYNPSNQQQNIINEIRIPRNIAAVIVGMALAVSGAIIQGVTRNGLADPALIGLN
                     SGASFALALTYAVLPNTSFLILMFAGFLGAILGGAIVLMIGRSRRDGFNPMRIILAGA
                     AVSAMLTALSQGIALAFRLNQTVTFWTAGGVSGTTWSHLKWAIPLIGIALFIILTISK
                     QLTILNLGESLAKGLGQNVTMIRGICLIIAMILAGIAVAIAGQVAFVGLMVPHIARFL
                     IGTDYAKILPLTALLGGILVLVADVIARYLGEAPVGAIISFIGVPYFLYLVKKGGRSI
                     "
     gene            6868..7884
                     /locus_tag="O7798_001088"
     CDS             6868..7884
                     /locus_tag="O7798_001088"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499213.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron ABC transporter permease"
                     /protein_id="HDC2863355.1"
                     /translation="MISSNNKRRQLIALAVFSILLFLGCTWSITSGEYNIPVERFFKT
                     LIGQGDAIDELILLDFRLPRMMITILAGAALSISGAIVQSVTKNPIAEPGILGINAGG
                     GFAIALFIAIGKINADNFVYVLPLISILGGITTALIIFIFSFNKNEGVTPASMVLIGV
                     GLQTALYGGSITIMSKFDDKQSDFIAAWFAGNIWGDEWPFVIAFLPWVLIIIPYLLFK
                     SNTLNIIHTGDNIARGLGVRLSRERLILFFIAVMLSSAAVAVAGSISFIGLMGPHIAK
                     RIVGPRHQLFLPIAILVGACLLVIADTIGKIVLQPGGVPAGIVVAIIGAPYFLYLMYK
                     TKNV"
     gene            8118..9086
                     /gene="dhaK"
                     /locus_tag="O7798_001089"
     CDS             8118..9086
                     /gene="dhaK"
                     /locus_tag="O7798_001089"
                     /EC_number="2.7.1.121"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499214.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydroxyacetone kinase subunit DhaK"
                     /protein_id="HDC2863356.1"
                     /translation="MMKKLINKKETFLTDMLEGLLIAHPELDLIANTVIVKKAKKEHG
                     VAIVSGGGSGHEPAHAGFVAEGMLDAAVCGEVFTSPTPDKILEAIKAVDTGDGVLLVV
                     KNYAGDVMNFEMAQELAEMEGINVQTVIVRDDIAVTNEVQRRGVAGTVFVHKLAGYLA
                     EKGYSLTEIKSRVEALLPEIKSIGMAIEPPLVPTTGKYGFDIEDDKMEIGIGIHGEKG
                     IHREEVKDIDHIVGTLLDELYKEVTANDVILMVNGMGGTPLSELNIVTKYIQQNLAAR
                     TVNVAKWFVGDYMTSLDMQGFSITIVPNKPEYLEAFLAPTTSQYFK"
     gene            9128..9712
                     /gene="dhaL"
                     /locus_tag="O7798_001090"
     CDS             9128..9712
                     /gene="dhaL"
                     /locus_tag="O7798_001090"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499215.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydroxyacetone kinase subunit L"
                     /protein_id="HDC2863357.1"
                     /translation="MKVNDMKARLLNLEETFKKHESELTELDRAIGDGDHGVNMVRGF
                     SSLKDKLDDSSMQSLFKSTGMALMSNVGGTSGPLYGFSFVKMSAVTKDDMDNQDFITL
                     IQAFAEAVESRGKVTLNEKTMYDVVARAAEKLKNGETLTFNDLQQLADNTKDMVATKG
                     RAAYFGEESKGYIDPGAQSMVYILNALIGDEDNA"
     gene            9705..10067
                     /locus_tag="O7798_001091"
     CDS             9705..10067
                     /locus_tag="O7798_001091"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499216.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS-dependent dihydroxyacetone kinase
                     phosphotransferase subunit DhaM"
                     /protein_id="HDC2863358.1"
                     /translation="MPKIILVSHSKEIASGTKSLLKQMAGDVDIIPIGGLPDGSIGTS
                     FDIIQEVLTKLEDDALCFYDIGSSEMNVDMAIEMYDGNHRVLKVDAPIVEGSFIAAVK
                     LSIGGSIDDALAEIKQSF"
     gene            10183..10680
                     /locus_tag="O7798_001092"
     CDS             10183..10680
                     /locus_tag="O7798_001092"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499217.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDC2863359.1"
                     /translation="MQHLIKKHVLNGEFDLVRQLMSETDFMEFEEAYISSAHEVESMM
                     FYTCILDMIKYEESSEIHDLAFLLLVYPLSEYEGALDSAYYHADASIKLTDGKEVKSL
                     LQMLLLHAIPTPVISDKKAFDIAKQILKLDPNNNVARNVLKDTAKRMDNVVVDINELH
                     QRNAR"
     gene            11136..12203
                     /locus_tag="O7798_001093"
     CDS             11136..12203
                     /locus_tag="O7798_001093"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499218.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDC2863360.1"
                     /translation="MMMNKEATKIGFAYVGIVVGAGFSTGQEVMQFFTKYGLWAYLGV
                     IISGFILAFIGRQVAKIGTAFEATNHESTLQYVFGEKFSKVFDYILIFFLFGIAVTMI
                     AGAGATFEESYNIPTWLGALIMTLAIYITLLLDFNKIVRALGIVTPFLIVLVVLIAGV
                     YLFKGHVSLAEVNQVVPEASIWKGIWFGTIYGGLAFSVGFSTIVAIGGDTEKRTVSGA
                     GAMYGGIIYTVLLALINFALQSEYPTIKNASIPTLTLANNIHPLIATVLSVIMLAVMY
                     NTILGLMYSFAARFTEPYSKNYHIFIIIMMVAGYLLSFVGFAELINKLYTIMGYVGLF
                     IVVAVIIKYFKRKNADKKHIA"
     gene            12354..13397
                     /locus_tag="O7798_001094"
     CDS             12354..13397
                     /locus_tag="O7798_001094"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499219.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HDC2863361.1"
                     /translation="MNKDNKWTMITALFITVISVLLAFHLKQHYDQITNENHANKDKI
                     NIKNKNVRIYQNLTYNRVFPNSKLDIITPVDMSSNAKLPVIFWMHGGGYIAGDKQYKN
                     PLLAKIAEQGYIVVNVNYALAPQYKYPTPLIQMNQATQFIKENKMNLPIDFNQVIIGG
                     DSAGAQLASQFTAIQTNDRLREAMKFDQSFKPSQIKGAILFGGFYNMQTVRETEFPRI
                     QLFMKSYTGEEDWEKSFKNISQMSTVKQSTKNYPPTFLSVGDSDPFESQNIEFSKKLQ
                     ELNVPVDTLFYDGTHHLHHQYQFHLNKPESIDNIKKVLLFLSRNTSSSGIQTEEKPQI
                     ENPSNELPLNPLN"
     gene            13726..14154
                     /locus_tag="O7798_001095"
     CDS             13726..14154
                     /locus_tag="O7798_001095"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499221.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDC2863362.1"
                     /translation="MTRSALKPFKNKRVMVTGRIQRVLFKNYLDRHSTFKPNVRILLK
                     DVFVSGVSIDHLWLYETNKYYALAMELIHQRVKFSANVVPYYKINRNNNLFVQDYGIK
                     RKGRLITEEAYNQNNQYQDKIYEKLPDIDFRLEDFYSKEN"
     gene            complement(14363..14869)
                     /locus_tag="O7798_001096"
     CDS             complement(14363..14869)
                     /locus_tag="O7798_001096"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499222.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HDC2863363.1"
                     /translation="MAHIIRRVSIKDVENFISMLANIYDESPYMFYTPGEYDPSVTSA
                     SKQLEEYITSPHKVIFVAESDEQLVGFAFVNTTPFQRIKHVAKIDLGVKKLYQHRGIG
                     QALLDAIMAWCLNNQIHRIEANVPLNNQPALELFKSADFQIEGVLKDKLFIDGKYYDD
                     YMMAKILN"
     gene            14982..15905
                     /gene="graX"
                     /locus_tag="O7798_001097"
                     /gene_synonym="apsX"
     CDS             14982..15905
                     /gene="graX"
                     /locus_tag="O7798_001097"
                     /gene_synonym="apsX"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499223.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="auxiliary protein GraX/ApsX"
                     /protein_id="HDC2863364.1"
                     /translation="MKPKVLLAGGTGYIGKYLSEVIENDAELFAISKYPDNKKTDDVE
                     MTWIQCDIFHYEQVVAAMNQIDIAVFFIDPTKNSAKITQSSARDLTLIAADNFGRAAA
                     INQVKKVIYIPGSRYDNETIERLGAYGTPVETTNLVFKRSLVNVELQVSKYDDVRSTM
                     KVVLPKGWTLKNVVNHFIAWMGYTKGTFVKTEKSHDQFKIYIKNKVRPLAVFKIEETA
                     DGIITLILLSGSLVKKYTVNQGKLEFRLIKESAVVYIHLYDYIPRLFWPIYYFIQAPM
                     QKMMIHGFEVDCRIKDFQSRLKSGENMKYTK"
     gene            15921..16595
                     /gene="graR"
                     /locus_tag="O7798_001098"
                     /gene_synonym="apsR"
     CDS             15921..16595
                     /gene="graR"
                     /locus_tag="O7798_001098"
                     /gene_synonym="apsR"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499224.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor
                     GraR/ApsR"
                     /protein_id="HDC2863365.1"
                     /translation="MQILLVEDDNTLFQELKKELEQWDFNVAGIEDFGKVMDTFESFN
                     PEIVILDVQLPKYDGFYWCRKMREVSNVPILFLSSRDNPMDQVMSMELGADDYMQKPF
                     YTNVLIAKLQAIYRRVYEFTAEEKRTLTWQDAVVDLSKDSIQKGDQTIFLSKTEMIIL
                     EILITKKNQIVSRDTIITALWDDEAFVSDNTLTVNVNRLRKKLSEISMDSAIETKVGK
                     GYMAHE"
     gene            16588..17628
                     /gene="graS"
                     /locus_tag="O7798_001099"
                     /gene_synonym="apsS"
     CDS             16588..17628
                     /gene="graS"
                     /locus_tag="O7798_001099"
                     /gene_synonym="apsS"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499225.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidine kinase GraS/ApsS"
                     /protein_id="HDC2863366.1"
                     /translation="MNNLKWVAYFLKSRMNWIFWILFLNFLMLGISLIDYDFPIDSLF
                     YIVSLNLSLTMIFLLLTYFKEVKLYKHFDKDKEIEEIKHKDLAETPFQRHTVDYLYRQ
                     ISAHKEKVVEQQLQLNMHEQTITEFVHDIKTPVTAMKLLIDQEKNQERKQALLYEWSR
                     INSMLDTQLYITRLESQRKDMYFDYVSLKRMVIDEIQLTRHISQVKGIGFDVDFKVDD
                     YVYTDIKWCRMIIRQILSNALKYSENFNIEIGTELNDQHVSLYIKDYGRGISKKDMPR
                     IFERGFTSTANRNETTSSGMGLYLVNSVKDQLGIHLQVTSTVGKGTTVRLIFPLQNEI
                     VERMSEVTNLSF"
     gene            17772..18533
                     /gene="vraF"
                     /locus_tag="O7798_001100"
     CDS             17772..18533
                     /gene="vraF"
                     /locus_tag="O7798_001100"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499226.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein VraF"
                     /protein_id="HDC2863367.1"
                     /translation="MAILEVKQLTKIYGTKKMAQEVLRDINMSIEEGEFIAIMGPSGS
                     GKTTLLNVLSSIDYISQGSITLKGKKLEKLSNKELSDIRKHDIGFIFQEYNLLHTLTV
                     KENIMLPLTVQKLDKEHMLNRYEKVAEALNILDISDKYPSELSGGQRQRTSAARAFIT
                     LPSIIFADEPTGALDSKSTQDLLKRLTRMNEAFKSTIIMVTHDPVAASYANRVVMLKD
                     GQIFTELYQGDDDKHTFFKEIIRVQSVLGGVNYDL"
     gene            18523..20412
                     /gene="vraG"
                     /locus_tag="O7798_001101"
     CDS             18523..20412
                     /gene="vraG"
                     /locus_tag="O7798_001101"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499227.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease VraG"
                     /protein_id="HDC2863368.1"
                     /translation="MTFNEIIFKNFRQNLSHYAIYLFSLITSVVLYFSFVALKYAHKL
                     NMTESYPIIKEGSQVGSYFLFFIIIAFLLYANVLFIKRRSYELALYQTLGLSKFNIIY
                     ILMLEQLLIFIITAILGIIIGIFGSKLLLMIVFTLLGIKEKVPIIFSLRAVFETLMLI
                     GVAYFLTSAQNFILVFKQSISQMSKNNQVKETNHNKITFEEVVLGILGIVLITTGYYL
                     SLNIVQYYDSIGTLMFILLSTVIGAYLFFKSSVSLVFKMVKKFRKGVISVNDVMFSSS
                     IMYRIKKNAFSLTVMAIISAITVSVLCFAAISRASLSSEIKYTAPHDVTIKDQQKANQ
                     LASELNNQKIPHFYNYKEVIHTKLYKDNLFDVKAKEPYNVTITSDKYIPNTDLKRGQA
                     DLFVAEGSIKDLVKHKKHGKAIIGTKKHHVNIKLRKDINKIYFMTDVDLGGPTFVLND
                     KDYQEIRKYTKAKHIVSQFGFDLKHKKDALALEKAKNKVDKSIETRSEAISSISSLTG
                     ILLFVTSFLGITFLIAVCCIIYIKQIDETEDELENYSILRKLGFTQKDMARGLKFKIM
                     FNFGLPLVIALSHAYFTSLAYMKLMGTTNQIPVFIVMGLYICMYAVFAVTAYNHSKRT
                     IRHSI"
BASE COUNT         7252 a         2746 c         3823 g         6879 t
ORIGIN      
        1 gggagaaagt atatgataga aatgcatgta tctatctaaa tgaattaact ataaatttca
       61 aacagaagag gtaaaactat gaaacgagaa aatccattgt ttttcttatt taaaaaacta
      121 tcatggccag tgggtcttat cgttgcagct atcactattt catcactagg gagcttaagt
      181 ggactattag tgccactgtt tactggacga attgtagata aattttccgt gagccatatc
      241 aattggaatc taatcgcatt atttggtggt atctttgtca tcaatgcttt attaagcgga
      301 ttaggtttat atttattaag taaaattggt gaaaagatta tttatgcgat acgctcagtt
      361 ttatgggagc atatcataca attaaaaatg ccattctttg acaaaaatga aagtggtcaa
      421 ttaatgagtc gattaactga cgatacgaaa gtgataaatg aatttatttc acaaaagcta
      481 cctaacttat taccatcaat cgttacatta gttgggtcac taatcatgtt atttatttta
      541 gattggaaaa tgacattatt aacatttata acgataccga tattcgtttt aattatgatt
      601 cctctaggtc gtattatgca aaagatatcg acaagtacac aatctgaaat tgcaaacttc
      661 agtggtttgt tagggcgtgt cctaactgaa atgcgtcttg ttaaaatatc aaatacagag
      721 cgtcttgaat tagataatgc acataaaaat ttgaatgaaa tatataaatt aggtttaaaa
      781 caggctaaaa ttgcggcagt tgtacaacca atttcaggta tagttatgtt gctaacaatt
      841 gcaattattt taggttttgg tgcattagaa attgcgactg gtgcaatcac tgcaggtaca
      901 ttaattgcaa tgatatttta tgttattcag ttatctatgc ctttaatcaa tctttccacg
      961 ttagttacag attataaaaa ggcagtcggt gcaagtagta gaatatacga aatcatgcaa
     1021 gaacctattg aaccgacaga agctcttgaa gattctgaaa atgtattaat tgatgacggt
     1081 gtattgtcat ttgaacatgt agactttaaa tatgatgtga agaaaatatt agatgatgtg
     1141 tcgttccaaa tcccacaagg tcaagtgagt gcttttgtag gcccttctgg gtctggtaaa
     1201 agtacgatat ttaatctgat agaacgtatg tatgaaattg agtcaggtga tattaaatat
     1261 ggccttgaaa gtgtctatga tatcccgtta tctaagtggc gacgcaaaat tggatatgtt
     1321 atgcaatcaa attcgatgat gagtggtaca attagagaca atattttata cggaattaat
     1381 cgtcatgttt cagatgaaga acttattaat tatgctaaat tagcgaactg tcatgatttt
     1441 atcatgcaat ttgatgaagg atatgacacg cttgtaggtg aacgaggatt gaaactgtct
     1501 ggcggacaac gtcaacgtat tgatattgct agaagttttg ttaaaaatcc tgatattttg
     1561 ttacttgatg aagcaacagc taatctcgat agtgaaagtg aattgaaaat tcaagaagct
     1621 ttagaaacat tgatggaagg tagaacaacg attgtcattg cgcatcgttt gtctacaatt
     1681 aaaaaagccg gtcaaattat attcttagac aaaggacagg taacaggtaa aggtacgcat
     1741 tcagaactga tggcatcaca tgcgaagtat aaaaactttg tagtgtctca aaaattaaca
     1801 gattaatttt atatatataa gtaagcttgg agcaaataca catataccat cgaggaaatt
     1861 aaagtgtggc acattgatgg atatagatgt taataaattg cttcaagctt ttgtctattt
     1921 taaatcattt gagaagttac gacataataa ttcttaaatt aatgaaatcg atattttaag
     1981 aaaaaaatgc tcatggtata atacaagtta taagcaaaca tacatatatt aaatactgta
     2041 gccacgagtc ataattcttc atattttaca tagcaattta actgatttta gagtccacgg
     2101 tacagaagtt tgatatttca atgtttctaa atttttaaaa aattaaatca taggtgggtg
     2161 ccaaatgttt ttattaatca acattattgg tctaattgta tttcttggta ttgcggtatt
     2221 attttcaaga gatcgcaaaa atatccaatg gcaatcaatt gggatcttag ttgttttaaa
     2281 cctgttttta gcatggttct ttatttattt tgattggggt caaaaagcag taagaggagc
     2341 agccaatggt atcgcttggg tagttcagtc agcgcatgct ggtacaggtt ttgcatttgc
     2401 aagtttgaca aatgttaaaa tgatggatat ggctgttgca gccttattcc caatattatt
     2461 aatagtgcca ttatttgata tcttaatgta ctttaatatt ttaccgaaaa ttattggagg
     2521 tattggttgg ttactagcta aagtaacaag acaacctaaa ttcgagtcat tctttgggat
     2581 agaaatgatg ttcttaggaa atactgaagc attagccgta tcaagtgagc aactaaaacg
     2641 tatgaatgaa atgcgtgtat taacaatcgc aatgatgtca atgagctctg tatcgggagc
     2701 tattgtaggt gcgtatgtac aaatggtacc aggagaactg gtactaacgg caattccact
     2761 aaatatcgtt aacgcgatta ttgtgtcatg cttgttgaat ccagtaagtg ttgaagagaa
     2821 agaagatatt atttacagtc ttaaaaacaa tgaagttgaa cgtcaaccat tcttctcatt
     2881 ccttggagat tctgtattag cagcaggtaa attagtatta atcatcatcg catttgttat
     2941 tagttttgta gcgttagctg atctatttga tcgttttatc aatttgatta caggattgat
     3001 agcaggatgg ataggcataa aaggtagttt cggtttaaac caaattttag gtgtgtttat
     3061 gtatccattt gcgctattac tcggtttacc ttatgatgaa gcgtggttgg tagcacaaca
     3121 aatggctaag aaaattgtta caaatgaatt tgttgttatg ggtgaaattt ctaaagatat
     3181 tgcatcttat acaccacacc atcgtgcggt tattacaaca ttcttaattt catttgcaaa
     3241 cttctcaacg attggtatga ttatcggtac attgaaaggc attgttgata aaaagacatc
     3301 agactttgta tctaaatatg tacctatgat gctattatca ggtatcctag tttcattatt
     3361 aacagcagct ttcgttggtt tatttgcatg gtaatatgtc gaagagtgac tatgataata
     3421 cattttaact aataaatatg tccaggcatg tcgtctattg atataggtga gatgcttgga
     3481 cttttttatt attgatataa aggtatttaa atatttttaa agttaccgaa attgaagcat
     3541 tataaaaacc aagtgcacat ggtaatacac ttggctttta tgggaaatga atattattgt
     3601 acatatgaca gtaaggacta ggtacagtca tagtacttcg agcaaaattt gttttgttat
     3661 tataaacaac acaaaggaga taacttctct attgaagaag ttaaaaacat tatagcagac
     3721 aatgaaatga aagtaaatta aaaattcaga atatttttaa ttattatatt gtgagtgata
     3781 tttattaggg aaagctattc ttcatataaa ttagttaaat agtaaatctt tgttagaact
     3841 ctttccatag agttgtgaca gcatttttgt tgtgctacta tttttatagt ctaataaata
     3901 tataaagggg atggtttcgt gaataaaacg gttaaagatt taatactagt tgtcttaggt
     3961 tcatttatct ttgctgcagg tgtaaatgca tttattattt ctggtaactt aggtgaaggc
     4021 ggggttacag gtttagcaat tattttatat tatgcgtttc atatttcacc agccatcact
     4081 aacttcttgg tcaacgcagt attgattgcc ataggttata aatttttgag taagagaagt
     4141 atgtacttaa ctattcttgt aacaattctt atttcaatat ttttgagttt aacagaatca
     4201 tggcaagtag aaactggaaa cagcattgtg aatgccattt ttggtggtgt aagcgttgga
     4261 ctaggaatcg gagtaattat ccttgcaggc ggtacaacag caggtacaac aattttggcg
     4321 agaattgcaa cgaaatacct cgatgtaagc acgccatatg ctttgctttt cttcgatatg
     4381 atcgttgttg caatttcact tacagttatt ccacttgata aagtattagt aacagtaata
     4441 tcactttata taggaacaaa agtgatggaa tatgtcatag aaggtttaaa cactaaaaaa
     4501 gctatgacga ttatttcaac taatcccgac aaacttgcca aagcaataga cgagcaaatt
     4561 ggaagaggtt taaccatttt aaacggacat ggctattata cgcgtgaaga aaaagatgtc
     4621 ttatacgttg ttatttctaa aacacaagtt tcaaaagcaa agcgattaat taaacaaatc
     4681 gataaagatg cattcctcgt aattcatgat gtaagagatg tctatggtaa tggctttctt
     4741 gcagatgaat aaataaatgg tatgagcaca catacttaaa tagaagtcca cggacaagtt
     4801 tttgaactat gaagacttat ctgtgggcgt tttttatttt ataaaagtaa tatacaagac
     4861 atgacaaatc gagctatcca atttaaaaag taatgttagt caataagatt gaaaaatgtt
     4921 ataatgatgt tcatgataat cattatcaat tgggatgtct ttgaaaattg ataatttaaa
     4981 aatagaaatt attttttata aacagaaaga attttattga aagtagggaa attatgaatc
     5041 gtttgcatgg acaacaagtt aaaattggtt acggggataa cacgattata aataaattag
     5101 atgttgaaat accagatggc aaagtgacgt caatcattgg tcctaacggc tgcgggaaat
     5161 ctactttgct aaaggcattg tcacgtttat tggcagttaa agaaggcgaa gtatttttag
     5221 atggtgaaaa tattcataca caatctacga aagagattgc aaaaaaaata gccattttac
     5281 ctcaatcacc tgaagtagca gatggcttaa ctgttgggga attagtttca tatggtcgtt
     5341 ttccacatca aaaaggattt ggtagattaa ctgctgagga taagaaagaa attgattggg
     5401 caatggaagt tacaggaact gatacattcc gacaccgttc aatcaatgat ttaagtggtg
     5461 gtcaaagaca acgtgtttgg attgcaatgg cattagcaca aagaactgat attatctttt
     5521 tagacgaacc aacaacatat ttagatatct gtcatcaatt agaaatacta gaattagttc
     5581 agaagctaaa tcaggaacaa ggttgtacaa ttgtcatggt tcttcatgat atcaaccaag
     5641 cgattcgttt ctcagatcat cttattgcga tgaaagaagg ggatatcatc gctacaggtt
     5701 caacagaaga cgtattaaca caggaaatat tagaaaaagt ttttaatatt gatgttgttt
     5761 taagtaaaga tcctaaaact ggaaaacctt tactggtaac ttatgactta tgtcgcagag
     5821 cttattctta attaagtaag ttaatatgat aaaaaggaca attaacatga caaatagaga
     5881 gaacccaacg ccattgaagt ttttatccta tattataggt ttaagtatga tactactaat
     5941 cacactattt atttctacat taataggtga cgccaaaatt caagcctcta caattataga
     6001 ggctattttt aattataatc ctagcaatca acagcaaaac atcatcaatg agattaggat
     6061 tcccagaaat atagcagcag taattgtagg tatggcgctt gcagtttctg gtgcgattat
     6121 acaaggtgtt actcgtaatg gtcttgctga tccggcgctc ataggtttaa attcaggtgc
     6181 ttcatttgct ttagcattaa catatgcagt tttaccaaac acttcatttt taatattgat
     6241 gtttgctgga tttttaggtg ctattctagg aggtgctatt gtattaatga taggccgatc
     6301 tagacgtgat ggatttaatc cgatgcgtat tattttagcg ggtgcagcag taagtgctat
     6361 gttaacagcg ctaagtcaag gtattgcatt agcttttaga ctaaatcaaa cagtaacatt
     6421 ttggactgct ggaggcgttt caggcacaac atggtcacac cttaagtggg caattccatt
     6481 aattggtatt gcgttattca ttatattaac aattagtaaa caacttacca ttttaaatct
     6541 tggtgaatca ttagctaaag gtttaggtca aaatgtaaca atgatcagag gcatatgttt
     6601 aattattgct atgattctag caggtattgc agttgctatc gctggacaag ttgcatttgt
     6661 aggtttgatg gtacctcata tagcaagatt tttaattgga actgattatg ctaaaattct
     6721 accattaaca gccttgttag gtgggatact cgtgcttgtt gccgatgtga tagcacgata
     6781 tttaggagaa gcgcctgttg gtgcaatcat ttcatttatc ggtgttcctt actttttata
     6841 tttagttaaa aaaggaggac gctcaatatg attagttcaa ataataaacg cagacaattg
     6901 atagcactgg ctgtttttag cattctacta tttctaggtt gtacttggag tattacctca
     6961 ggtgaataca acatacctgt tgaaagattt ttcaaaactt taattggaca aggtgatgcc
     7021 attgatgagt taatcttatt agatttcagg ttacctcgga tgatgattac tattttggct
     7081 ggcgcagcgc ttagtattag tggtgcaata gtgcaaagtg tcacaaaaaa tccaatagct
     7141 gaaccaggta tattaggtat taacgcaggt ggcggatttg caatcgcatt atttattgca
     7201 attggtaaaa ttaatgctga caactttgtt tatgtactgc cgttaataag tatactaggt
     7261 ggtatcacca ctgcattgat tatttttatt ttcagtttta ataaaaatga aggtgttaca
     7321 cctgcgagta tggtattaat aggtgtaggt ttacaaacag cattatatgg tggctcaatt
     7381 acaattatgt caaaatttga tgataagcaa tctgatttca tcgctgcttg gtttgcaggt
     7441 aatatttggg gtgacgaatg gccatttgtc attgcatttt taccgtgggt gttgattatt
     7501 attccttact tactatttaa atcgaataca ctaaatatta ttcatacggg tgataatatt
     7561 gcacgaggtc taggtgtaag gttaagcaga gaacgtttaa tattattctt tatcgcagtg
     7621 atgttatcat ctgctgctgt agcagtagca ggttcaattt cgtttatcgg attaatgggt
     7681 ccgcatattg ccaaacgtat cgttggacca cgtcaccagt tgtttttacc aattgccatt
     7741 ttagtagggg catgtttact tgttatagct gatacaattg gcaaaattgt attacaacca
     7801 ggtggggttc cagcaggtat tgtcgtagca attattggtg caccgtattt cttatattta
     7861 atgtacaaaa cgaaaaatgt atagtgtcaa tggacacaac ttattgctat gaaaggcact
     7921 ttattataag gcttttcata gcatttttta tttaatgagc cactcaagac tatttatttt
     7981 ttcaataatg aaccattaag ttatcaagag gatcttatca aaaatatatt tgataacggt
     8041 atcaggttaa ttctttatga tagcgcattc atttattctg ttttatacta tgactgataa
     8101 taccaaggag gtacaacatg atgaaaaagt taatcaataa aaaagaaaca tttttaactg
     8161 atatgcttga aggattgtta attgcgcacc cagagttaga tctgattgct aatacagtta
     8221 ttgtaaaaaa agctaagaaa gaacatggtg tagcaatagt ctctggaggt ggaagcggac
     8281 atgaacctgc gcatgccggt tttgttgcag aaggtatgct agatgcagcg gtttgtggcg
     8341 aagtatttac atcacctaca cctgataaaa tattagaagc tattaaagca gtagatactg
     8401 gtgatggtgt attactagtt gtaaaaaact atgcaggtga cgtgatgaat ttcgaaatgg
     8461 cacaagagct tgcagaaatg gaaggtataa atgttcaaac tgttattgtt cgtgacgaca
     8521 ttgctgtgac aaacgaagta caacgtcgtg gtgttgcagg aacagtgttt gttcataagc
     8581 ttgccggtta tcttgctgaa aaaggttatt cattaacaga gataaaatcg cgtgtagaag
     8641 cgttgttacc tgaaattaaa agtattggta tggcaattga gccaccgctt gttccaacta
     8701 ctggaaaata tggctttgat attgaagacg acaaaatgga aatcggtatt ggtatacatg
     8761 gtgaaaaagg tattcatagg gaagaagtaa aggatattga tcatattgtt ggaacattgt
     8821 tagacgaatt gtataaagaa gttactgcca atgatgtcat attaatggta aatggtatgg
     8881 gtggtacgcc gttatctgaa ttaaatatcg taactaaata tattcaacaa aatttagctg
     8941 caagaacggt taatgttgct aaatggtttg ttggtgatta tatgacatct ttagacatgc
     9001 aaggtttttc tataactatc gtgcctaata aaccagaata tttggaagca tttttagcac
     9061 caacaacaag tcaatacttt aaataagaag tgaatatgaa taaatataca tttatgaggt
     9121 ggcacaaatg aaagtgaatg atatgaaagc acgtttatta aatttagaag aaacgtttaa
     9181 aaaacatgaa tctgaattaa ctgaattaga tcgagcaatt ggtgatggtg accacggggt
     9241 taacatggtt cgtgggttta gtagtcttaa agacaaactt gatgatagct caatgcaatc
     9301 attgttcaaa tcaactggta tggcattgat gtcaaatgtt gggggtacat caggaccact
     9361 gtatggcttt agctttgtta aaatgtctgc agtcaccaaa gatgatatgg ataatcaaga
     9421 tttcattaca ctaattcagg catttgccga agcggttgaa tcacgtggta aagttacttt
     9481 aaatgaaaag acaatgtatg atgtagtagc gcgagcagca gagaagctta aaaatggtga
     9541 aactttaaca ttcaatgatt tacagcaatt agcagataat acaaaagata tggtagcaac
     9601 gaaaggtaga gctgcatatt ttggagaaga atcaaaaggt tatattgatc caggtgctca
     9661 aagtatggtt tatattttaa acgctttgat tggagatgaa gataatgcct aaaattatac
     9721 ttgttagcca cagtaaagaa attgcaagtg gtacaaaatc tttgttaaag caaatggcag
     9781 gtgacgttga tattatacca atcgggggat taccagatgg ttcaattgga acttcatttg
     9841 atatcatcca agaagttttg actaaattag aggatgatgc attgtgtttt tacgatattg
     9901 gatcttcaga aatgaatgta gatatggcaa ttgaaatgta tgatggtaat catcgtgtgt
     9961 taaaagttga tgcaccaatt gttgaaggca gttttatcgc agcagtaaag ctatcaatcg
    10021 gcggttcaat tgatgatgca ttagcagaaa tcaaacaatc attttagtta aaatttacta
    10081 ataatgaaaa atgtaaacct ttttcaaatg aaactttata aaaaatatga tagtatatat
    10141 gtaaatgttt aataaaatct ggagaaatag gaggacattg ccatgcaaca ccttataaaa
    10201 aaacatgtat tgaatggcga gtttgattta gtacgacaat tgatgtccga aacagatttt
    10261 atggaatttg aagaagcata tatttcaagt gcgcatgaag tagaaagtat gatgttttat
    10321 acatgtattt tagatatgat taagtacgaa gaatcatctg aaatacatga cttagcattt
    10381 ttattgcttg tgtatccact aagtgaatat gaaggtgctt tggattctgc ttattatcat
    10441 gcagacgctt ccataaaact tactgacggc aaagaagtta aaagtttgtt acaaatgtta
    10501 ttattgcatg cgataccaac acctgttatt tcagataaga aggcttttga tatcgccaag
    10561 caaattttaa aattagatcc taataataat gttgctcgta acgtcttaaa agacactgcc
    10621 aaacgtatgg acaacgttgt tgttgatata aatgaattac accaacgtaa tgcacgttaa
    10681 ttacatttca attatattag cttaataata gttttaacat ttggttgggt tgggcatatg
    10741 ttccagcctt ttttaatact taaaaactaa cgaagtatac ttgtgtgcac aaatggtttt
    10801 tatacaacat tttataaatt tatacatttt aataaagaac atacgataga tggtttaaac
    10861 cttgttaact gagaaatttt gatatgtatt cttcgaaatt taactaaata tacgaaattc
    10921 aagaagcaca ataattaatc atttttccta tacaaaagtt cgtatgactg cattataaaa
    10981 gcataaattt ataatttttt taaatgtcat tgaacgtgat aatgtgaatg gattgagcaa
    11041 ttttgaaaaa gtgaaaaata acctatgcga cttgcaatta attttcagta cgttataatg
    11101 cacactgtgc aaaattaagg aggtctatta ttcacatgat gatgaataaa gaagcaacaa
    11161 aaattggatt tgcctacgtc ggcattgtag tgggcgcagg attttcaact ggacaagaag
    11221 ttatgcaatt tttcactaaa tatggcttgt gggcttattt aggtgttatt atatctggtt
    11281 ttattttagc ttttattggg cgccaagtag caaaaattgg tactgccttt gaagcgacaa
    11341 atcatgaatc aacattacaa tacgtattcg gtgaaaagtt tagtaaagtc tttgattata
    11401 ttttaatctt cttcttattt ggtatagctg taaccatgat agctggtgca ggcgcaacat
    11461 ttgaagaaag ttataacata cctacatggc taggtgcttt aattatgaca ttagcgattt
    11521 atattacgtt gttattagac tttaataaaa tagtacgtgc actaggtatc gttacaccat
    11581 ttttaattgt tttagttgta ttaatcgctg gcgtttattt atttaaaggt catgtttcat
    11641 tagcagaagt taaccaagta gtgcctgaag caagtatttg gaagggaatc tggtttggta
    11701 caatatatgg tggattagct ttttctgtag gttttagtac catcgtagca atcggtgggg
    11761 atactgaaaa gcgtacagtg tcaggtgcag gcgcgatgta tggtggtatt atctatactg
    11821 tattactagc attgatcaac tttgcattgc aaagtgaata tccaactatt aaaaatgcct
    11881 caattcctac attgacgtta gcaaataata tccatccttt aatagcaaca gtgttatctg
    11941 ttattatgct ggcggttatg tataatacta ttctaggact aatgtattca tttgcagcac
    12001 gttttacaga accatacagt aaaaattatc atatctttat tattataatg atggtagcag
    12061 gttatttatt aagtttcgta ggatttgctg aattaattaa taagttatat acaattatgg
    12121 gatatgtagg cttatttatt gtagtagctg taattattaa atatttcaaa cgtaaaaatg
    12181 cggataaaaa acatattgct taatatcata tgagggatat ccgaaacttt acaattgaat
    12241 cactttgttt taaccttaaa agcaattcgt ctctactctt atcgggcgaa ttgcttttta
    12301 tatttattca gtctattaat atgagcgtct aacaaataga gaggtacgat gtaatgaata
    12361 aagataataa atggacgatg ataactgcgc tttttataac tgtaatcagt gtattgttag
    12421 catttcatct gaaacaacat tatgaccaaa ttacaaatga gaaccatgct aataaagaca
    12481 aaattaatat taaaaataaa aatgtgcgca tttatcaaaa ccttacatac aatagagttt
    12541 tccctaacag taaattagat attattacac ctgttgatat gtcttctaat gccaaactgc
    12601 cagttatttt ttggatgcac ggtggtggtt atattgcggg tgataagcag tataaaaacc
    12661 cattattagc gaaaattgct gaacaagggt acattgttgt gaatgtaaat tatgcattgg
    12721 cgccacaata taaatatccc acaccattaa ttcaaatgaa tcaagcaact caattcatta
    12781 aagaaaataa aatgaattta cctattgatt ttaatcaagt aattattggc ggtgattctg
    12841 caggtgctca attagctagc caatttacgg caatacagac gaatgatcgc ttaagagaag
    12901 ccatgaaatt tgatcagtca ttcaaaccat cgcaaattaa aggtgctata ctatttggtg
    12961 gtttttataa tatgcaaaca gttagagaaa ctgagtttcc aagaatacag ttatttatga
    13021 aaagttatac tggcgaagaa gattgggaaa agagttttaa aaacatttca caaatgtcga
    13081 cagtaaaaca atcgacaaaa aattatccac caacattttt atctgttgga gatagcgatc
    13141 cattcgaaag tcaaaatata gaattcagta agaaattaca agaattgaat gtaccagtag
    13201 atactttgtt ttatgatggt acgcatcatt tacatcatca gtatcaattt caccttaata
    13261 aacctgaatc gatagataat atcaaaaaag tgttactttt cttaagtcgt aatacatcct
    13321 ctagtggtat tcaaactgaa gagaaaccac aaatagaaaa tccgagtaat gaattaccgt
    13381 taaatccttt aaactaatga taaacagtag taatttatta cttaagcaac atttaagatt
    13441 ttcaaattaa aaacgaagaa tttaaaacat gtggtgctaa tgtgtaagag tctgagatat
    13501 aataaattgt tagcggttct ttatcatttc tatctcactc tattatgatg tgacatttat
    13561 tttacaaact aatttgtttt gaacctgaaa ataacttttt acaactaaat tgtcgaaaaa
    13621 cagtgtgtac atgatataat aaatttataa attgaaaaga attcaaaaga aaaattaaaa
    13681 tatagattga gcacgaagtg atttgaaata aggttgtgaa agggaatgac aaggtcagca
    13741 ttaaaaccat ttaaaaataa acgcgttatg gttactggac gtatacaacg tgttttgttt
    13801 aaaaattatt tagatagaca tagcacattt aagccgaatg taaggatatt attaaaagat
    13861 gtatttgttt caggtgtatc aatagatcat ttatggttat atgagacaaa taaatactat
    13921 gcattggcaa tggaacttat tcatcaacga gtaaaattta gtgcgaatgt tgtaccgtat
    13981 tacaaaataa atagaaataa taatttattc gtacaagatt atggaattaa gcgtaaaggt
    14041 aggttaatta ctgaagaagc ttacaatcaa aacaatcagt atcaggataa gatatatgaa
    14101 aaattaccgg atatagattt tagactcgaa gatttttata gtaaggaaaa ctaaacaaca
    14161 tatataaagc accactaatc gtagttgata gttaatcaat tacacattag tggtgtttta
    14221 ttttgaattt aaatttgata aatgaataag agtgtacgta tttatttgag attagataac
    14281 attgataagt atgagtaatg tattaggtaa ccattaaatt cgttgttata cgattctgat
    14341 acaagattat gataaaatag ctttaattaa gaattttagc catcatatag tcatcataat
    14401 atttaccatc gataaataac ttatctttta aaacgccttc gatttgaaaa tcggcacttt
    14461 taaaaagctc gagggcaggt tggttattga gtggtacatt tgcttcaatt cggtgtattt
    14521 gattgtttaa acaccaagcc ataatggcat caagaagtgc ttggccaatt ccacgatgtt
    14581 gatataattt ctttacacct aaatcaattt tagcaacatg tttaatgcgt tgaaatggtg
    14641 tcgtattaac aaaggcaaag ccaacgagtt gttcatcact ttcagcaacg aagatgactt
    14701 tatgcggaga agtgatatat tcttctaatt gtttactagc cgatgtgacg ctaggatcat
    14761 attctcctgg tgtgtagaac atatacggag attcgtcgta tatgttcgct aacattgaaa
    14821 tgaaattttc tacatctttg atactaactc tacgtataat atgggccata aaaagcctcc
    14881 agtattttga aattttaaaa catttgctac tattataata tatatgtaac taaaaggtgg
    14941 agtaatatgt tttttggtta cagtttaaag gagtatttta gatgaaacct aaagttttat
    15001 tagcaggtgg aacaggatat attggtaagt atttaagtga agtgattgaa aatgatgctg
    15061 aactttttgc tatatcaaaa tatccagaca ataaaaaaac agatgatgtt gaaatgactt
    15121 ggattcagtg tgatatattt cattacgaac aggttgttgc agcaatgaat caaatagata
    15181 ttgctgtatt ctttatcgac ccaacaaaga attctgccaa aataacacaa tcatcagcaa
    15241 gagatttaac attaatcgca gcagataatt ttggtcgagc agcggctatc aatcaagtaa
    15301 aaaaagtaat ctacatacct gggagtcgtt atgataatga aacaattgaa cgcctaggtg
    15361 catatggtac acctgtagaa acaacaaatt tagtttttaa acgttcttta gttaatgtag
    15421 aattacaagt ttcaaagtat gatgatgtta gatcaacgat gaaggtagtt ttaccaaagg
    15481 gatggacatt aaagaacgtt gtaaaccatt ttattgcatg gatgggttac actaaaggaa
    15541 cttttgtgaa aacagaaaaa tcacatgatc aatttaagat atatattaag aataaggtgc
    15601 gaccgctcgc agtatttaaa atagaagaaa cagctgatgg aataataact ttaattttat
    15661 tgagtggaag tttagtgaaa aaatatacag ttaatcaagg gaagttagaa tttagattaa
    15721 tcaaagagtc ggcagtcgtt tatatacatc tatacgatta tatccctcga ttattttggc
    15781 cgatttatta ctttatacaa gcaccaatgc aaaaaatgat gattcatggc tttgaagttg
    15841 actgccggat taaagatttt caaagtcgat taaaatcagg agaaaatatg aaatatacta
    15901 aatgatattg ggtgatatgg atgcaaatac tactagtaga agatgacaat actttgtttc
    15961 aagaattgaa aaaagaatta gaacaatggg attttaatgt tgctggtatt gaagatttcg
    16021 gcaaagtaat ggatacattt gaaagtttta atcctgaaat tgttatattg gatgttcaat
    16081 tacctaaata tgatgggttt tattggtgca gaaaaatgag agaagtttcc aacgtaccaa
    16141 tattattttt atcatctcgt gataatccaa tggatcaagt gatgagtatg gaacttggcg
    16201 cagatgatta tatgcaaaaa ccgttctata ccaatgtatt aattgctaaa ttacaagcga
    16261 tttatcgtcg tgtctatgag tttacagctg aagaaaaacg tacattgact tggcaagatg
    16321 ctgtcgttga tctatcaaaa gatagtatac aaaaaggtga tcagacgatt ttcctgtcca
    16381 aaacagaaat gattatatta gaaattctta ttaccaaaaa aaatcaaatc gtttcgagag
    16441 atacaattat cactgcatta tgggatgatg aagcatttgt tagtgataat acgttaacag
    16501 taaatgtgaa tcgtttacga aaaaaattat ctgaaattag tatggatagt gcaatcgaaa
    16561 caaaagtagg aaaaggatat atggctcatg aataatttga aatgggtagc ttattttttg
    16621 aaatctcgca tgaactggat attttggata ttgtttttaa acttccttat gttaggcatt
    16681 agtctaatcg attatgattt tccaatagac agtttatttt atattgtttc tttgaattta
    16741 agtttaacaa tgatttttct tttattgaca tattttaaag aagtaaaatt atataagcat
    16801 tttgacaaag ataaagaaat agaagaaatt aaacataaag atttagcgga aacgccattt
    16861 caacgtcata cagttgatta tttatatcgt caaatctcag cgcacaaaga aaaggttgtt
    16921 gagcaacagt tgcaattgaa catgcatgaa caaaccatta cagaatttgt gcacgacata
    16981 aaaacacctg tgacagctat gaaattatta attgatcaag aaaaaaatca agaaagaaaa
    17041 caagcattac tatatgaatg gtctcgtata aactcgatgc tagatacaca gctgtatatt
    17101 actagattag aatctcaacg taaagatatg tattttgatt acgtgtcact taaacgcatg
    17161 gtcattgatg aaatacaatt aacaagacat attagtcagg ttaaaggtat tggttttgat
    17221 gttgacttta aagtggatga ttatgtttat acagatataa aatggtgtcg tatgattatt
    17281 agacaaattt tgtcaaacgc attgaaatat agtgagaatt ttaatattga aattgggaca
    17341 gaattaaatg atcaacatgt ttcgttatat attaaagact atggcagagg tattagtaaa
    17401 aaagatatgc cgcgaatatt tgaacgagga tttacgtcaa cggctaacag aaatgaaacg
    17461 acgtcttcag gtatgggtct atatttagta aatagtgtaa aggatcaatt aggtattcac
    17521 ctgcaagtca cgtcgactgt tggtaagggg acaactgtca gattgatttt cccattacaa
    17581 aatgaaattg ttgaacgcat gtcggaagtg acaaatttgt cattttaaac atgcgttttg
    17641 ttacttagaa ttgatacatc aatgcagctt caacgttata ataagataga tgttagtcat
    17701 atgttaaatt gaagatacaa gtgccaaagc ctaaaggaaa tgaagttaag ataaattata
    17761 ggagtgttaa agtggcaatt ttagaagtaa aacaattaac aaaaatatat ggaactaaaa
    17821 aaatggcaca agaagtgttg cgagatatca atatgtctat tgaagaaggc gagtttattg
    17881 ctattatggg tccctctgga tctgggaaaa cgacattatt aaatgtttta agttcaattg
    17941 attatatttc acaaggttct attacattaa aaggaaaaaa attagaaaag ctttcaaaca
    18001 aggaattatc tgatatacgc aagcatgata ttggttttat ttttcaagag tataatttac
    18061 tgcatacatt gactgttaaa gaaaacataa tgttaccact aacggtacag aagttagata
    18121 aagaacatat gttaaatcgt tatgaaaaag tagcagaagc attaaatata ttggatatta
    18181 gtgataaata tccctctgaa ttgtctggtg gacaaaggca acgaacatca gctgccagag
    18241 catttataac attgccttct attatatttg ctgacgaacc aacaggtgca ctggattcta
    18301 aaagtactca agatttatta aaacgattaa caagaatgaa tgaagcattt aagtctacaa
    18361 ttattatggt aacgcatgat cctgttgcag caagctatgc aaatcgagta gtgatgctaa
    18421 aagatggtca aattttcact gaattatacc aaggggatga cgataaacat acctttttca
    18481 aagaaataat acgtgtacaa agtgttttag gtggcgttaa ttatgacctt taacgagata
    18541 atatttaaaa atttccgtca aaatttatca cattatgcca tctatctttt ttcgttaatt
    18601 acgagtgtag tattgtattt tagctttgta gcattaaaat acgctcataa actaaacatg
    18661 acagagtcat atccaattat aaaggaaggc tcacaagtcg gaagctactt tctatttttc
    18721 atcataattg catttttgtt atatgccaat gtgttattta ttaaacgacg aagttatgag
    18781 cttgcattat atcaaacatt aggtttatct aaattcaaca ttatttatat actaatgctc
    18841 gaacaattac taatatttat aattacggca atattaggta ttattattgg tatttttggt
    18901 tcgaaactgt tattaatgat tgtctttaca ttattaggaa ttaaagaaaa ggttccaatt
    18961 atttttagtt tgagggcggt atttgaaaca ttaatgttaa tcggtgtcgc ttatttttta
    19021 acatctgctc aaaattttat attagtgttc aaacaatcta tttcacagat gtcaaagaat
    19081 aaccaggtta aagaaacaaa tcataataaa attacatttg aagaggttgt tttaggcatc
    19141 ttaggtatag tattgattac cacaggatac tatctatctt tgaacattgt tcaatattat
    19201 gattctatcg gtacacttat gtttatttta ttgtcaactg tgattggggc atacttattt
    19261 tttaaaagct ctgtttctct agtttttaaa atggtgaaga agtttagaaa aggtgttata
    19321 agtgtaaatg atgtcatgtt ctcatcatct attatgtatc gtattaagaa aaatgctttt
    19381 tcacttacgg tcatggcaat catttcagcg attactgttt cagttctttg ctttgctgct
    19441 ataagtagag cgtccttatc aagtgaaata aaatatactg caccacacga cgttacaatt
    19501 aaagaccaac aaaaagctaa tcaattagca agtgaattaa acaatcaaaa aattcctcat
    19561 ttttataatt ataaagaagt aattcatacg aaattgtata aagataattt atttgatgta
    19621 aaagcgaaag aaccatacaa tgtaacaatt actagtgata aatacatccc taatactgat
    19681 ttgaaacgtg ggcaagctga tttatttgta gcggaaggtt ctatcaaaga tttagtgaaa
    19741 cataagaagc atggtaaggc aattatagga acgaaaaaac atcatgttaa tattaagtta
    19801 cgtaaagata ttaataaaat ctattttatg acagatgttg atttaggtgg accaacgttt
    19861 gtcttaaatg acaaagacta tcaagaaata agaaagtata caaaggcaaa gcatatcgtc
    19921 tctcaatttg gattcgattt gaaacataaa aaagatgctt tagcattaga aaaagcgaaa
    19981 aataaagttg ataaatctat tgaaacaaga agtgaagcga taagctcaat atcaagttta
    20041 accggaatat tattatttgt aacatcattt ttaggtatta cattcttgat tgctgtatgt
    20101 tgcattatat acataaagca aatagatgaa accgaagatg agttagagaa ttatagtatt
    20161 ttgagaaagc ttggatttac acaaaaagat atggcaaggg gactaaagtt taaaattatg
    20221 tttaattttg ggttaccttt agttattgca ctatcacatg catattttac atcattagca
    20281 tatatgaaat taatgggtac aacgaatcaa ataccggttt tcatagtaat gggattatac
    20341 atttgtatgt atgctgtttt tgcagtgacg gcttataatc attccaagcg aacaattaga
    20401 cattccatat aaaatataca gatggctttc agtagagtag tggattcgga ttcacgaact
    20461 atactggaag ctttttatta taaatgaaga gaagttatat ttttagcatg tatagttgaa
    20521 tactgggtta aaataccata ttaataatga agtaaaggta tgagtgatta tgaaagtgtt
    20581 ttgaatgaaa tatatttaat tggtgatgct tttaattgaa aagattaaca ggattcaact
    20641 ttgtaaattg tattaaatgt gagaaaataa aagtatattc attgagagat atatgagtca
//
LOCUS       DALPQQ010000035        20154 bp    DNA     linear   BCT 22-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus strain K18-6-464
            SAMD00233528-rid16434743.denovo.035, whole genome shotgun sequence.
ACCESSION   DALPQQ010000035 DALPQQ010000000
VERSION     DALPQQ010000035.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMD00233528
            Sequence Read Archive: DRR236061
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 20154)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 20154)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001543423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001543423.1
            Genome Coverage       :: 77x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/22/2022 17:09:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,811
            CDSs (total)                      :: 2,743
            Genes (coding)                    :: 2,689
            CDSs (with protein)               :: 2,689
            Genes (RNA)                       :: 68
            rRNAs                             :: 2, 4, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 4, 2 (16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 54
            CDSs (without protein)            :: 54
            Pseudo Genes (ambiguous residues) :: 0 of 54
            Pseudo Genes (frameshifted)       :: 27 of 54
            Pseudo Genes (incomplete)         :: 27 of 54
            Pseudo Genes (internal stop)      :: 10 of 54
            Pseudo Genes (multiple problems)  :: 10 of 54
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..20154
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMD00233528-rid16434743.denovo.035"
                     /strain="K18-6-464"
                     /db_xref="taxon:1280"
                     /geo_loc_name="Japan: Niigata"
     gene            129..1721
                     /locus_tag="O7798_001102"
     CDS             129..1721
                     /locus_tag="O7798_001102"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498669.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-lactate permease"
                     /protein_id="HDC2863369.1"
                     /translation="MTLLTVNPFDNVGLSALVAAVPIILFLLCLTVFKMKGIYAALTT
                     LVVTLIVALFVFELPARVSAGAITEGVVAGIFPIGYIVLMAVWLYKVSIKTGQFSIIQ
                     DSIASISVDQRIQLLLIGFCFNAFLEGAAGFGVPIAICAVLLIQLGFEPLKAAMLCLI
                     ANGAAGAFGAIGLPVSIIDTFNLSGGVTTLDVARYSALTLPILNFIIPFVLVFIVDGM
                     KGIKEILPVILTVSGTYTGLQLLLTIFHGPELADIIPSLATMVVLAFVCRKFKPKNIF
                     RLEASEHKIQKRTPKEIVFAWSPFVILTAFVLVWSAPFFKKLFQPGGALESLVIKLPI
                     PNTVSDLSPKGIALRLDLIGATGTAILLTVIITILITKLKWKSAGALLVEAIKELWLP
                     ILTISAILAIAKVMTYGGLTVAIGQGIAKAGAIFPLFSPVLGWIGVFMTGSVVNNNTL
                     FAPIQATVAQQISTSGSLLVAANTAGGVAAKLISPQSIAIATAAVKKVGEESALLKMT
                     LKYSIIFVAFICVWTFILTLIF"
     gene            complement(2050..3600)
                     /gene="spa"
                     /locus_tag="O7798_001103"
     CDS             complement(2050..3600)
                     /gene="spa"
                     /locus_tag="O7798_001103"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498670.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="staphylococcal protein A"
                     /protein_id="HDC2863370.1"
                     /translation="MKKKNIYSIRKLGVGIASVTLGTLLISGGVTPAANAAQHDEAQQ
                     NAFYQVLNMPNLNADQRNGFIQSLKDDPSQSANVLGEAQKLNDSQAPKADAQQNNFNK
                     DQQSAFYEILNMPNLNEAQRNGFIQSLKDDPSQSTNVLGEAKKLNESQAPKADNNFNK
                     EQQNAFYEILNMPNLNEEQRNGFIQSLKDDPSQSANLLSEAKKLNESQAPKADNKFNK
                     EQQNAFYEILHLPNLNEEQRNGFIQSLKDDPSQSANLLAEAKKLNDAQAPKADNKFNK
                     EQQNAFYEILHLPNLTEEQRNGFIQSLKDDPSVSKEILAEAKKLNDAQAPKEEDNNKP
                     GKEDNNKPGKEDNNKPGKEDNNKPGKEDGNKPGKEDNKKPGKEDGNKPGKEDGNKPGK
                     EDNKKPGKEDGNKPGKEDGNKPGKEDGNGVHVVKPGDTVNDIAKANGTTADKIAADNK
                     LADKNMIKPGQELVVDKKQPANHADANKAQALPETGEENPFIGTTVFGGLSLALGAAL
                     LAGRRREL"
     gene            complement(4021..4773)
                     /gene="sarS"
                     /locus_tag="O7798_001104"
     CDS             complement(4021..4773)
                     /gene="sarS"
                     /locus_tag="O7798_001104"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498671.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HTH-type transcriptional regulator SarS"
                     /protein_id="HDC2863371.1"
                     /translation="MKYNNHDKIRDFIIIEAYMFRFKKKVKPEVDMTIKEFILLTYLF
                     HQQENTLPFKKIVSDLCYKQSDLVQHIKVLVKHSYISKVRSKIDERNTYISISEEQRE
                     KIAERVTLFDQIIKQFNLADQSESQMIPKDSKEFLNLMMYTMYFKNIIKKHLTLSFVE
                     FTILAIITSQNKNIVLLKDLIETIHHKYPQTVRALNNLKKQGYLIKERSTEDERKILI
                     HMDDAQQDHAEQLLAQVNQLLADKDHLHLVFE"
     gene            complement(5142..6140)
                     /gene="sirC"
                     /locus_tag="O7798_001105"
     CDS             complement(5142..6140)
                     /gene="sirC"
                     /locus_tag="O7798_001105"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000136636.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="staphyloferrin B ABC transporter permease
                     subunit SirC"
                     /protein_id="HDC2863372.1"
                     /translation="MTEKINKKDNYHLIFALIFLAIVSVVSMMIGSSFIPLQRVLMYF
                     INPNDSMDQFTLEVLRLPRITLAILAGAALGMSGLMLQNVLKNPIASPDIIGITGGAS
                     LSAVVFIAFFSHLTIHLLPLFAVLGGAVAMMILLVFQTKGQIRPTTLIIIGISMQTLF
                     IALVQGLLITTKQLSAAKAYTWLVGSLYGATFKDTIILGMVILAVVPLLFLVIPKMKI
                     SILDDPVAIGLGLHVQRMKLIQLITSTILVSMAISLVGNIGFVGLIAPHIAKTIVRGS
                     YAKKLLMSAMIGAISIVIADLIGRTLFLPKEVPAGVFIAAFGAPFFIYLLLTVKKL"
     gene            complement(6137..7132)
                     /gene="sirB"
                     /locus_tag="O7798_001106"
     CDS             complement(6137..7132)
                     /gene="sirB"
                     /locus_tag="O7798_001106"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498673.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="staphyloferrin B ABC transporter permease
                     subunit SirB"
                     /protein_id="HDC2863373.1"
                     /translation="MLLKPKYQIVIAGLCLAIVAILSLMIGNTLVSPGTVIQALFNFD
                     SENDLHDVVTGARASRTIIALLTGAALAVSGLLMQALTRNPIASPGLFGVNAGAVFFV
                     IFSITFIQIQSFKMIVVIAFLGAIVVTVLVVALGMFRQTLFSPHRVILAGAAIAMLFT
                     AFTQGILIMNETDLQGLLFWLSGSVSLRNIWDIPWIIPLVLILILIAFSMAAHINILM
                     TSDDIATGLGQNIKLIKWMIIMLISMLAGISVAVAGSIVFVGLIVPNISKRLLPPNYK
                     YLIPFTALAGAILMIISDIVARIIIKPLELPIGVVTAVIGAIVLIYIMKKGRQRL"
     gene            complement(7148..8140)
                     /gene="sirA"
                     /locus_tag="O7798_001107"
     CDS             complement(7148..8140)
                     /gene="sirA"
                     /locus_tag="O7798_001107"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498674.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="staphyloferrin B ABC transporter
                     substrate-binding protein SirA"
                     /protein_id="HDC2863374.1"
                     /translation="MNKVIKMLVVTLAFLLVLAGCSGNSNKQSSDNKDKETTSIKHAM
                     GTTEIKGKPKRVVTLYQGATDVAVSLGVKPVGAVESWTQKPKFEYIKNDLKDTKIVGQ
                     EPAPNLEEISKLKPDLIVASKVRNEKVYDQLSKIAPTVSTDTVFKFKDTTKLMGKALG
                     KEKEAEDLLKKYDDKVAAFQKDAKAKYKDAWPLKASVVNFRADHTRIYAGGYAGEILN
                     DLGFKRNKDLQKQVDNGKDIIQLTSKESIPLMNADHIFVVKSDPNAKDAALVKKTESE
                     WTSSKEWKNLDAVKNNQVSDDLDEITWNLAGGYKSSLKLIDDLYEKLNIEKQSK"
     gene            8371..9351
                     /gene="sbnA"
                     /locus_tag="O7798_001108"
     CDS             8371..9351
                     /gene="sbnA"
                     /locus_tag="O7798_001108"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000570808.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2,3-diaminopropionate biosynthesis protein SbnA"
                     /protein_id="HDC2863375.1"
                     /translation="MIEKSQACHDSLLDSVGQTPMVQLHQLFPKHEVFAKLEYMNPGG
                     SMKDRPAKYIIEHGIKHGLITENTHLIESTSGNLGIALAMIAKIKGLKLTCVVDPKIS
                     PTNLKIIKSYGANVEMVEEPDAHGGYLMTRIAKVQELLATIDDAYWINQYANELNWQS
                     HYHGAGTEIVETIKQPIDYFVAPVSTTGSIMGMSRKIKEVHPNAQIVAVDAKGSVIFG
                     DKPINRELPGIGASRVPEILNRSEINQVIHVDDYQSALGCRKLIDYEGIFAGGSTGSI
                     IAAIEQLITSIEEGATIVTILPDRGDRYLDLVYSDTWLEKMKSRQGVKSE"
     gene            9348..10358
                     /gene="sbnB"
                     /locus_tag="O7798_001109"
     CDS             9348..10358
                     /gene="sbnB"
                     /locus_tag="O7798_001109"
                     /EC_number="1.5.1.51"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498676.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-[(2S)-2-amino-2-carboxyethyl]-L-glutamate
                     dehydrogenase SbnB"
                     /protein_id="HDC2863376.1"
                     /translation="MNREMLYLNRSDIEQAGGNHSQVYVDALTEALTAHAHNDFVQPL
                     KPYLRQDPENGHIADRIIAMPSHIGGEHAISGIKWIGSKHDNPSKRNMERASGVIILN
                     DPETNYPIAVMEASLISSMRTAAVSVIAAKHLAKKGFKDLTIIGCGLIGDKQLQSMLE
                     QFDHIERVFVYDQFSEAYARFVDRWQQQRPEINFIATENAKEAVSNGEVVITCTVTDQ
                     PYIEYDWLQKGAFISNISIMDVHKEVFIKADKVVVDDWSQCNREKKTINQLVLEGKFS
                     KEALHAELGQLVTGDIPGREDDDEIILLNPMGMAIEDISSAYFIYQQAQQQNIGTTLN
                     LY"
     gene            10379..12133
                     /gene="sbnC"
                     /locus_tag="O7798_001110"
     CDS             10379..12133
                     /gene="sbnC"
                     /locus_tag="O7798_001110"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498677.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="staphyloferrin B biosynthesis protein SbnC"
                     /protein_id="HDC2863377.1"
                     /translation="MQNHTAVNTAQAIILRDLVDALLFEDIAGIVSNSEITKENGQTL
                     LIYERETQQIKIPVYFSALNMFRYESSQPITIEGRVSKQPLTAAEFWQTIANMNCDLS
                     HEWEVARVEEGLTTAATQLAKQLSELDLASHPFVMSEQFASLKDRPFHPLAKEKRGLR
                     EADYQVYQAELNQSFPLMVAAVKKTHMIHGDTANIDELENLTVPIKEQATDMLNDQGL
                     SIDDYVLFPVHPWQYQHILPNVFAKEISEKLVVLLPLKFGDYLSSSSMRSLIDIGAPY
                     NHVKVPFAMQSLGALRLTPTRYMKNGEQAEQLLRQLIEKDEALAKYVMVCDETAWWSY
                     MGQDNDIFKDQLGHLTVQLRKYPEVLAKNDTQQLVSMAALAANDRTLYQMICGKDNIS
                     KNDVMTLFEDIAQVFLKVTLSFMQYGALPELHGQNILLSFEDGRVQKCVLRDHDTVRI
                     YKPWLTAHQLSLPKYVVREDTPNTLINEDLETFFAYFQTLAVSVNLYAIIDAIQDLFG
                     VSEHELMSLLKQILKNEVATISWVTTDQLAVRHILFDKQTWPFKQILLPLLYQRDSGG
                     GSMPSGLTTVPNPMVTYD"
     gene            12126..13382
                     /gene="sbnD"
                     /locus_tag="O7798_001111"
     CDS             12126..13382
                     /gene="sbnD"
                     /locus_tag="O7798_001111"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498678.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="staphyloferrin B export MFS transporter"
                     /protein_id="HDC2863378.1"
                     /translation="MINQSIWRSNFRILWLSQFIAIAGLTVLVPLLPIYMASLQNLSV
                     VEIQLWSGIAIAAPAVTTMIASPIWGKLGDKISRKWMVLRALLGLAVCLFLMALCTTP
                     LQFVLVRLLQGLFGGVVDASSAFASAEAPAEDRGKVLGRLQSSVSAGSLVGPLIGGVT
                     ASILGFSALLMSIAVITFIVCIFGALKLIETTHMPKSQTPNINKGIRRSFQCLLCTQQ
                     TCRFIIVGVLANFAMYGMLTALSPLASSVNHTAIDDRSVIGFLQSAFWTASILSAPLW
                     GRFNDKSYVKSVYIFATIACGCSAILQGLATNIEFLMAARILQGLTYSALIQSVMFVV
                     VNACHQQLKGTFVGTTNSMLVVGQIIGSLSGAAITSYTTPATTFIVMGVVFAVSSLFL
                     ICSTITNQINDHTLMKLWELKQKSAK"
     gene            13372..15108
                     /gene="sbnE"
                     /locus_tag="O7798_001112"
     CDS             13372..15108
                     /gene="sbnE"
                     /locus_tag="O7798_001112"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498679.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-2,3-diaminopropanoate--citrate ligase SbnE"
                     /protein_id="HDC2863379.1"
                     /translation="MQNKELIQHAAYAAIERILNEYFREENLYQVPPQNHQWSIQLSE
                     LETLTGEFRYWSAMGHHMYHPEVWLIDGKSKKITTYKEAIARILQHMAQSADNQTAVQ
                     QHMAQIMSDIDNSIHRTARYLQSNTIDYVEDRYIVSEQSLYLGHPFHPTPKSASGFSE
                     ADLEKYAPECHTSFQLHYLAVHQDVLLTRYVEGKEDQVEKVLYQLADIDISEIPKDFI
                     LLPTHPYQINVLRQHPQYMQYSEQGLIKDLGVSGDSVYPTSSVRTVFSKALNIYLKLP
                     IHVKITNFIRTNDLEQIERTIDAAQVIASVKDEVETPHFKLMFEEGYRALLPNPLGQT
                     VEPEMDLLTNSAMIVREGIPNYHADKDIHVLASLFETMPDSPMSKLSQVIEQSGLAPE
                     AWLECYLNRTLLPILKLFSNTGISLEAHVQNTLIELKDGIPDVCFVRDLEGICLSRTI
                     ATEKQLVPNVVAASSPVVYAHDEAWHRLKYYVVVNHLGHLVSTIGKATRNEVVLWQLV
                     AHRLMTWKKEYANNAVFVDCVEDLYQTPTIAAKANLMSKLNDCGANPIYTHIPNPICH
                     NKEVSYCESNNS"
     gene            15017..16867
                     /gene="sbnF"
                     /locus_tag="O7798_001113"
     CDS             15017..16867
                     /gene="sbnF"
                     /locus_tag="O7798_001113"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498680.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-(L-alanin-3-ylcarbamoyl)-2-[(2-
                     aminoethylcarbamoyl)methyl]-2-hydroxypropanoate synthase
                     SbnF"
                     /protein_id="HDC2863380.1"
                     /translation="MIVVQTLFIHIYQIQFVITRRYRIVNQTILNRVKTRVMHQLVSS
                     LIYENIVVYKASYQDGVGHFTIEGHDSEYRFTAEKTHSFDRIRITSPIERVVGDEADT
                     TTDYTQLLREVVFTFPKNDEKLEQFIVELLQTELKDTQSMQYRESNPPATPETFNDYE
                     FYAMEGHQYHPSYKSRLGFTLSDNLKFGPDFVPNVKLQWLAIDKDKVETTVSRNVVVN
                     EMLRQQVGDKTYEHFVQQIEASGKHVNDVEMIPVHPWQFEHVIQVDLAEERLNGTVLW
                     LGESDELYHPQQSIRTMSPIDTTKYYLKVPISITNTSTKRVLAPHTIENAAQITDWLK
                     QIQQQDMYLKDELKTVFLGEVLGQSYLNTQLSPYKQTQVYGALGVIWRENIYHMLIDE
                     EDAIPFNALYASDKDGVPFIENWIKQYGSEAWTKQFLAVAIRPMIHMLYYHGIAFESH
                     AQNMMLIHENGWPTRIALKDFHDGVRFKREHLSEAASHLTLKPMPEAHKKVNSNSFIE
                     TDDERLVRDFLHDAFFFINIAEIILFIEKQYGIDEELQWQWVKGIIEAYQEAFPELNN
                     YQHFDLFEPTIQVEKLTTRRLLSDSELRIHHVTNPLGVGGINDATTISET"
     gene            16842..17618
                     /gene="sbnG"
                     /locus_tag="O7798_001114"
     CDS             16842..17618
                     /gene="sbnG"
                     /locus_tag="O7798_001114"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498681.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="staphyloferrin B biosynthesis citrate synthase
                     SbnG"
                     /protein_id="HDC2863381.1"
                     /translation="MQQLSLKHRLNNGDSVYGIFNSIPDPLMIEVIAASGYDFVVIDT
                     EHVAINDETLAHLIRAAEAAHIIPIVRVTAVIDRDIIKVLDMGARGIIVPHVKDRETV
                     EHIVKLSRYYPQGLRSLNGGRMARFGRTPLLDAMEMANEHIMVIAMIEDVEGVMAIDD
                     IAQVEGLDMIVEGAADLSQSLGIPWQTRDDQVTSHVQHIFEVVNAHGKHFCALPREDE
                     DIAKWQAQGVQTFILGDDRGKIYRHLSASLATSKQKGDEG"
     gene            17618..18820
                     /gene="sbnH"
                     /locus_tag="O7798_001115"
     CDS             17618..18820
                     /gene="sbnH"
                     /locus_tag="O7798_001115"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498682.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="staphyloferrin B biosynthesis decarboxylase
                     SbnH"
                     /protein_id="HDC2863382.1"
                     /translation="MRIVQPVIEQLKAQSHPVCHYIYDLVGLEHHLQHITSSLPSNCQ
                     MYYAMKANSERKILDTISQYVEGFEVASQGEIAKGLAFKPANHIIFGGPGKTDEELRY
                     AVSEGVQRIHVESMHELQRLNAILEDEDKTQHILLRVNLAGPFPNATLHMAGRPTQFG
                     ISEDEVDDVIEAALAMPKIHLDGFHFHSISNNLDSNLHVDVVKLYFKKAKAWSEKHRF
                     PLKHINLGGGIGVNYADLTNQFEWDNFVERFKTLIVEQEMEDVTLNFECGRFIVAHIG
                     YYVTEVLDIKKVHGAWYAILRGGTQQFRLPVSWQHNHPFDIYRYKDNPYSFEKVSISR
                     QDTTLVGQLCTPKDVFAREVQIDAISTGDVIVFKYAGAYGWSISHHDFLSHPHPEFIY
                     LTQTKEDE"
     gene            18824..19588
                     /gene="sbnI"
                     /locus_tag="O7798_001116"
     CDS             18824..19588
                     /gene="sbnI"
                     /locus_tag="O7798_001116"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498683.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional transcriptional
                     regulator/O-phospho-L-serine synthase SbnI"
                     /protein_id="HDC2863383.1"
                     /translation="MNHIHEHLKLVPVDKIDLHETFEPLRLEKTKSSIEADDFIRHPI
                     LVTAMQHGRYMVIDGVHRYTSLKALGCKKVPVQEIHETQYSISTWQHKVPFGVWWETL
                     QQEHRLPWTTETRQEAPFITMCHGDTEQYLYTKDLGEAHFQVWEKVVASYSGCCSVER
                     IAQGTYPCLSQQDVLMKYQPLSYKEIEAVVHKGETVPAGVTRFNISGRCLNLQVPLAL
                     LKQDDDVEQLRNWKQFLADKFANMRCYTEKVYLVEQ"
     gene            19784..>20154
                     /locus_tag="O7798_001117"
     CDS             19784..>20154
                     /locus_tag="O7798_001117"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498685.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDC2863384.1"
                     /translation="MSSIIGKIAIWIGIVAQIYFSVVFVRMISINIAGGSDYETIFLL
                     GLILALFTVLPTIFTAIYMESYSVIGGALFIVYAIIALCLYNFLSSILWLIGGILLIW
                     NKYSKDESTDENEKVDIESTE"
BASE COUNT         6503 a         3192 c         3927 g         6532 t
ORIGIN      
        1 aaaattcgat tgcctgtcac atataggagt gttacatttt aaatatgtga tcatcgcaaa
       61 atataagttg aaataggttg tagattaatc agaatgataa atattttata taaagagagg
      121 gagtcattat gacactactt actgtaaatc cattcgataa tgtcggatta tcagccttag
      181 ttgcagcagt acctattatt ttatttttat tatgcttaac cgtttttaaa atgaaaggca
      241 tttatgcagc attgacaact ttggttgtta cattgattgt ggctttattt gtatttgaat
      301 taccagcgcg tgtatcagca ggtgcgatta cagaaggcgt tgttgccggt attttcccaa
      361 taggatatat cgttttaatg gcagtttggt tatataaagt ttctattaaa acaggacaat
      421 tttctattat tcaagatagt attgcaagta tttcagtgga ccaaagaatc caactattat
      481 taattggatt ttgtttcaac gcatttttag aaggtgcagc aggatttggt gtgccaattg
      541 cgatttgtgc agtattatta attcaacttg gatttgaacc attaaaagca gcgatgttat
      601 gtttaattgc taatggtgcg gcgggtgcct ttggtgcaat tggtttacca gttagtatta
      661 ttgatacgtt taacttaagt ggaggcgtta caacattaga tgttgcgaga tactcagcat
      721 taacacttcc aattttaaac tttattattc catttgtttt agtattcatt gtagatggta
      781 tgaaaggtat taaagaaatt ttacctgtca ttttaacagt gagtggtaca tatactggat
      841 tacaattatt attaacaata ttccatggtc cagaactagc agacattatt ccatcactag
      901 caacaatggt ggtgttagca tttgtttgtc gtaaatttaa accgaaaaac attttcagat
      961 tggaagcgtc tgaacataaa attcaaaaac gaacgcctaa agaaattgtc tttgcttgga
     1021 gtccgttcgt aattttaact gcctttgtat tagtatggag tgcaccattc ttcaaaaaat
     1081 tattccaacc tggaggtgca cttgaaagtt tagtaataaa attgccaatt ccaaatactg
     1141 tgagtgattt atcgcctaaa ggaattgcgt tgcgtctcga tttaattggt gcaactggga
     1201 cagcgatttt attaacagta attattacaa ttttaattac gaagttaaaa tggaaaagtg
     1261 caggtgcttt attggtcgaa gcaattaaag aattatggtt accgatcctt acaatttcag
     1321 ctatcctagc tattgctaaa gttatgacat acggtggttt gactgtagca attggacaag
     1381 gtattgctaa agcgggagca attttcccat tattctctcc agtattaggt tggattggtg
     1441 tgtttatgac tggttcagtt gtaaataaca atactttatt cgcacctatt caagcgacag
     1501 tggcacaaca aatttcaaca agcggttcat tacttgtggc agctaacact gcaggtggtg
     1561 tagcagcgaa acttatttca ccacaatcaa ttgccattgc gactgcagct gttaaaaaag
     1621 ttggtgaaga atctgcatta ttaaaaatga cgttaaaata cagtattata tttgttgctt
     1681 ttatttgtgt ttggacgttt atactaacgt taatattcta aatataaata atgttgtcac
     1741 ttggattcaa atgacatttt aaatctaatt attcatgaat cgaactagta cgaaatgcaa
     1801 tgagcatctt gtctagttcg attttttaat gcctaaaaat gtcatatatg taatcagagt
     1861 agaaagtgtt gaggcgtttc agaagttgtt tagaaaagta agtaaaataa aaaatgcact
     1921 gagcaacaaa agatgttgct cgtgcattta gatgattctt atcatttcaa ataagaatgt
     1981 gttaatcaac gtatataagt taaaattggt ttggataaaa tgatatctat cgttgtgtat
     2041 tgtttgtttt tatagttcgc gacgacgtcc agctaataac gctgcaccta aggctaatga
     2101 taatccacca aatacagttg taccgatgaa tggattttct tcaccagttt ctggtaatgc
     2161 ttgagctttg ttagcatctg catggtttgc tggttgcttc ttatcaacaa caagttcttg
     2221 accaggtttg atcatgtttt tatcagctaa tttgttatct gcagcaattt tgtcagcagt
     2281 agtgccgttt gcttttgcaa tgtcatttac tgtatcacca ggtttaacga catgtactcc
     2341 gttaccatct tctttaccag gtttgttgcc atcttctttg ccaggcttgt tgccgtcttc
     2401 tttaccaggt tttttgttgt cttctttacc aggcttgttg ccatcttctt taccaggctt
     2461 gttgccatct tctttaccag gttttttgtt gtcttcttta ccaggcttgt tgccgtcttc
     2521 tttgccaggc ttgttgttgt cttctttacc aggcttgttg ttgtcttctt tgccaggctt
     2581 gttattgtct tctttgccag gcttgttatt gtcttcctct tttggtgctt gagcatcgtt
     2641 tagcttttta gcttctgcta aaatttcttt gctcactgaa ggatcgtctt taaggctttg
     2701 gatgaagccg ttacgttgtt cttcagttaa gttaggtaaa tgtaaaattt catagaaagc
     2761 attttgttgt tctttgttga atttgttgtc agcttttggt gcttgagcat catttagctt
     2821 tttagcttct gctaaaaggt tagcgctttg gcttgggtca tcttttaggc tttggatgaa
     2881 accattgcgt tgttcttcgt ttaagttagg taaatgtaag atttcataga aagcattttg
     2941 ttgttctttg ttgaatttgt tatccgcttt cggtgcttga gattcattta actttttagc
     3001 ttctgacaat aggttagcac tttggcttgg gtcatctttt aagctttgga tgaaaccatt
     3061 gcgttgttct tcgtttaagt taggcatatt caagatttca tagaaagcat tttgttgttc
     3121 tttgttgaaa ttgttatcag ctttcggtgc ttgagattcg tttaattttt tagcttcacc
     3181 taaaacgtta gtgctttggc ttgggtcgtc tttaagactt tgaatgaagc cgttacgttg
     3241 cgcttcgttt aagttaggca tgttcaagat ttcatagaag gcgctttgtt gatctttgtt
     3301 gaagttattt tgttgcgcat cagcttttgg agcttgagag tcattaagtt tttgagcttc
     3361 acctaaaacg ttagcacttt ggcttggatc atctttaagg ctttggataa aaccattgcg
     3421 ttgatcagca tttaagttag gcatatttaa gacttgataa aaagcatttt gttgagcttc
     3481 atcgtgttgc gcagcatttg cagcaggtgt tacgccacca gatataagta atgtacctaa
     3541 agttacagat gcaataccta cacctagttt acgaattgaa taaatgtttt tctttttcaa
     3601 attaataccc cctgtatgta tttgtaaagt catcataata taacgaatta tgtattgcaa
     3661 tactaaaatc tatatttata attaaattta aatgtaagtt ttacaactta taaaataaat
     3721 attttgctga aagatttatt caggaagtaa aaggcttaaa accgcaaaat cacgctattt
     3781 cgattaataa aaacagataa aatatagaga tattttttat aatgaaagcg gtttaataca
     3841 tatgagttaa aaaatatttt taagaataaa gtggggcttt gaatgtgctg aggtttaatt
     3901 tcggaaatgg ttttaagtga tatagaaaat agaaagttgt tcattatgtg ctgaggtttt
     3961 attaaaaaat agaaaacaca agtgcacttt agaatacagc acacttgcgt aatagagata
     4021 ttattcaaaa acaagatgta aatgatcttt atctgctaat aattgattca cttgagctaa
     4081 taattgttca gcatggtctt gctgcgcgtc atccatatga attaaaattt ttctttcatc
     4141 ttcagttgag cgttctttta ttagatagcc ttgctttttt aaattattga gagctctaac
     4201 agtttgaggg tatttatggt ggattgtttc aattaaatct ttaagaagaa cgatgttttt
     4261 attttgagaa gtgataatag ctagaattgt gaattctaca aaacttaatg ttagatgttt
     4321 tttgataata ttcttgaaat acattgtata catcatcaag tttagaaatt ctttactatc
     4381 ttttggtatc atctgtgatt cactttgatc tgcaaggtta aattgtttaa tgatttgatc
     4441 aaacaatgta acacgttctg caattttctc tcgttgttct tcagatattg aaatgtaagt
     4501 attacgctca tcaattttac ttcgaacttt actaatatat gaatgtttca caagtacttt
     4561 tatatgctgt actaaatccg attgtttata acataaatct gaaacaatct tcttaaatgg
     4621 aagtgtgttt tcttgctgat gaaataaata agtcagtaat ataaattctt ttatagtcat
     4681 atcgacttca ggcttgactt ttttcttaaa acgaaacata tatgcttcaa tgattataaa
     4741 atctctaatt ttgtcatggt tattatattt cattgtttta tctccttgta tatgcacttt
     4801 attttaatat aacacaatat aataagaaaa ataatccata atttacaatt aaaaataata
     4861 tgatattttt attaaaattt gtgtttttga ataaatgaca ttatcaaaca ctatatttaa
     4921 ataagaaata gttatcgata tttgaaaaat cgaagaatat tgattgatat tatagaatat
     4981 gagtcggtgt tatttgtata taaagtatta atatgtaatt aagaaagtcg acgcttgtta
     5041 acaataacaa caactatatg tataaaaaaa cctcgcaacg gttagttaac tgaatcattt
     5101 agctaacttc gttgtgaggt cattttgttt taataatatc gttataactt tttcacggtt
     5161 aataataagt atatgaagaa tggggcacca aaagcagcaa taaatacacc tgctggcact
     5221 tctttaggca agaataaggt acgcccaatt aagtctgcaa taacaattga tatggcacca
     5281 atcattgctg acattagtaa ctttttagca taacttccgc gaacgattgt tttcgcgata
     5341 tgtggtgcga ttaaaccgac aaacccaatg ttacctacta aactgattgc catagatacg
     5401 agtatagtag aagtgattaa ttggattagt ttcatacgtt gtacatgtaa gcctaagcca
     5461 atcgctacag ggtcatcaag tatagatatt ttcatttttg gtataacaag aaataacaac
     5521 ggcacaacag ctaaaataac catacccaaa atgattgtat ctttaaacgt agcaccgtaa
     5581 agacttccga ctagccatgt ataagctttg gcagcagata attgcttcgt tgtaatgagt
     5641 aatccttgga caagcgcaat aaacaacgtt tgcatcgaaa taccgatgat tatgagtgtt
     5701 gtcgggcgta tttgtccttt cgtttgaaac actaatagta tcatcattgc aactgcgcca
     5761 cctaatactg caaatagtgg aagtaaatgt attgttaaat ggctgaaaaa tgcaataaag
     5821 acaacagcac ttaagctagc accacctgtg ataccgataa tatcaggtga ggcaattgga
     5881 ttttttaata cattttgcaa cattaaacca ctcattccta gtgcggcacc tgctaaaatc
     5941 gcaagtgtaa tgcgaggtaa gcgtaatact tctaaagtga attgatccat actgtcattt
     6001 ggatttataa agtacatcag tacgcgttgt aatggtataa agcttgaacc aatcatcata
     6061 cttaccactg aaacgatggc taaaaagatt aacgcgaaga tgagatggta attgtctttt
     6121 ttattaatct tttcggtcat aagcgttgac gtcctttctt cataatatag attaagacaa
     6181 tagcgccaat gacagcggta acgacaccga taggcaactc tagtggctta attattatac
     6241 gagcaacaat gtctgaaatg atcattagga ttgctccagc taatgcagta aaaggaatta
     6301 aatacttata gtttggtggt aataatcgtt tgctaatatt cggtacgata agacccacaa
     6361 agacgattga tccagctacg gctaccgaaa taccggctaa catactgatg agcataataa
     6421 tcatccattt gattaatttt atgttttgac cgaggccggt tgcaatgtcg tcacttgtca
     6481 tcaagatgtt gatgtgtgca gccatgctaa atgcaattaa aataagtatc aatacaagcg
     6541 gaataatcca tgggatatcc caaatattac gtaatgaaac ggagccactt aaccaaaata
     6601 ataggccttg taagtctgtt tcgttcataa taagtatgcc ttgagtaaag gctgtaaata
     6661 gcatcgcaat cgcagcacct gccaaaatga cacggtgagg tgagaatagt gtttgtctaa
     6721 acatacctag tgcaacaact aatacagtaa caacaatagc ccccaaaaat gcaataacta
     6781 caatcatttt aaaagattga atttggataa atgtaatact aaaaatgaca aaaaatactg
     6841 cgcctgcatt gacaccgaaa agccctggtg aggctattgg gtttcgtgta agtgcttgca
     6901 tcaacaaacc tgagacagca agggcagcac cagtcaataa cgcaatgatt gttctcgacg
     6961 cccgtgcacc agtgacaaca tcatgtaaat cgttttcact atcaaagttg aataacgcct
     7021 gtatcaccgt acctggtgac acaagcgtat ttccaatcat taaacttaag atagctacta
     7081 ttgcaagaca taaaccagca ataacgattt ggtattttgg tttaagtagc atcgtaaaac
     7141 tccttaatta ttttgattgt ttttcaatat ttaacttttc atataaatcg tcaataagtt
     7201 ttaatgaaga tttatatccg ccagctaagt tccaagtgat ttcatctaaa tcatcagata
     7261 cttggttgtt tttaactgcg tctaaatttt tccactcttt acttgaagtc cattcgcttt
     7321 cagtcttttt aactaatgca gcatctttcg catttggatc tgattttact acaaaaatat
     7381 gatcagcgtt cattaatgga atgctttctt tagatgtaag ttggataata tctttaccat
     7441 tatcaacttg tttttgtaag tctttattac gtttgaatcc taaatcattt aagatttcac
     7501 cagcatatcc accagcataa attcttgtat gatcagcacg gaagttaaca actgaagctt
     7561 tcaatggcca tgcatcttta tactttgctt ttgcatcttt ttggaatgca gctactttat
     7621 catcgtactt tttaagtaaa tcttcagctt ctttttcttt ccctaaagct ttccccatta
     7681 acttagttgt atctttgaat ttgaaaactg tatcagtaga aactgttggt gcgattttag
     7741 ataattgatc gtaaactttt tcatttctaa cttttgacgc gacaattaag tccggtttta
     7801 atttagagat ttcctctaag ttaggtgcag gttcttgacc tacaatctta gtatctttta
     7861 aatcattttt tatgtattcg aatttcggtt tttgtgtcca tgattctaca gcacctacag
     7921 gtttaacacc taaagataca gcgacgtcag tggcaccttg atatagcgta acaacacgct
     7981 ttggtttccc tttaatttca gttgtaccca ttgcatgttt aattgaagtt gtttccttat
     8041 ctttgttatc agatgattgt ttatttgaat tcccactaca tcctgctaaa acaagtagga
     8101 aagcaagcgt aacaacaagc attttaatta ctttattcat tgactaatta gcctccttcg
     8161 tgatgtatga caatgagaat cattatcacg atttagtatg aattaaattt tttcctaagt
     8221 caataaaata tttatgattt acatgcaact tataattatt tgacatataa atgcataaaa
     8281 aatataatcc taattacttg atagtgagaa tcattatcaa ttaggtaaca cacaatatta
     8341 tagaatttta aatttgagga ggaagcgctt ttgattgaaa aaagtcaagc atgtcacgat
     8401 tcattgttag attctgtagg gcaaacacct atggttcaac ttcatcaact atttccgaaa
     8461 catgaagtgt ttgcaaagtt agagtatatg aatcctggag gcagcatgaa agatcgacct
     8521 gccaagtaca tcattgaaca tggtattaaa catggtttaa tcactgagaa tacacattta
     8581 attgaaagta cttctggtaa tttaggcatt gcgttggcaa tgatagctaa aatcaaggga
     8641 ttaaaactca cgtgtgttgt tgatcctaaa atatcaccaa caaatttgaa aattattaaa
     8701 agttatggtg ccaatgtaga aatggttgaa gaacctgatg cacatggggg ttatttaatg
     8761 actcgtattg caaaggtgca agaactgtta gccactattg acgatgcata ttggattaat
     8821 caatatgcga atgagttaaa ttggcaatcc cattatcatg gtgcaggcac agagattgtt
     8881 gaaacaatta agcaacctat agattatttt gtcgcgccag tcagcacgac aggtagcatt
     8941 atgggtatga gtagaaaaat aaaagaagtg catccaaacg cacaaattgt tgctgttgat
     9001 gcgaaagggt cagtcatttt tggtgacaaa cctattaata gagaattacc tggtatcggt
     9061 gctagtcgtg tacccgaaat attgaataga tcagaaatta atcaagtgat ccatgtagat
     9121 gattatcaat ctgctttggg ctgtcgaaaa ctgattgatt atgaaggcat atttgccgga
     9181 ggttcaacag gttcgattat tgcagcgatt gagcagttga taacgtcaat tgaagaaggt
     9241 gcaacaattg tcacgatttt accagatcga ggcgatcgtt acttagattt agtttattca
     9301 gatacatggt tagaaaaaat gaaatcaaga caaggagtta aatcagaatg aatagagaga
     9361 tgttgtattt aaatagatca gatattgaac aagcgggagg taatcattca caagtttatg
     9421 tggacgcatt aacagaagca ttaacagccc atgcgcacaa tgattttgta caaccgctta
     9481 agccgtattt aagacaggat cctgaaaatg gacacatcgc agatcgaatt attgcaatgc
     9541 caagtcatat cggtggtgaa cacgcaattt caggtattaa gtggataggt agtaagcacg
     9601 acaatccatc gaaacgtaat atggagcgtg caagtggcgt cattattttg aatgatccag
     9661 aaacgaatta tccaattgca gttatggaag caagtttaat tagtagtatg cgtactgcag
     9721 cagtttcagt gattgcagca aagcatttgg ctaaaaaagg atttaaagac ttaacaatca
     9781 ttggatgcgg gctaatcgga gacaagcaat tacaaagtat gttagagcaa ttcgatcata
     9841 ttgaacgcgt gtttgtttac gatcaattct ctgaagcata tgcacgcttt gttgatagat
     9901 ggcaacaaca gcgtccggaa attaatttta ttgcgacaga aaatgctaaa gaagcagtat
     9961 caaatggtga agtagtcatt acatgtaccg taacggatca accatacatt gaatatgatt
    10021 ggttacaaaa gggtgcattt attagcaaca tttctatcat ggatgtgcat aaagaagtct
    10081 ttattaaagc tgacaaagtc gtagtagatg actggtcaca atgtaatcga gaaaagaaaa
    10141 ctattaacca attggtgtta gaaggtaaat tcagcaaaga agctcttcat gctgaactag
    10201 gacaacttgt gacaggtgac ataccaggac gtgaagacga tgatgagatc atattactta
    10261 atccgatggg tatggctatc gaagatattt caagtgctta ttttatttat caacaggcac
    10321 aacaacaaaa tattgggaca acattgaacc tatattaaga atgcgaggtg tctgaacatt
    10381 gcagaatcat acagcagtca atacagcaca agcgataata ttaagagatt tagttgatgc
    10441 attattattt gaagatatag ccggaattgt atcgaatagt gagattacta aagaaaacgg
    10501 acaaacgctt ttgatatacg aacgtgaaac acaacaaata aagatacctg tttattttag
    10561 tgctttaaat atgtttcgtt acgaaagttc acaaccaatt acgatagagg gaagggtgtc
    10621 taagcaacct ttaacggcag ctgaattttg gcaaacaatt gctaatatga attgtgatct
    10681 aagtcatgaa tgggaagtgg ctcgcgttga agaaggactg actactgctg ccacacagct
    10741 tgctaaacaa ttatcagaat tagatttagc gtcacatcct tttgtgatgt cagagcagtt
    10801 tgcaagttta aaagatcgtc catttcatcc attagctaaa gaaaaaagag gattaagaga
    10861 agcggattat caagtgtatc aagctgaatt aaatcaatca tttcctttaa tggttgcagc
    10921 agttaaaaag acacatatga ttcatggcga tactgcaaat atcgatgaat tagaaaattt
    10981 gacagtacct ataaaagaac aagcgacaga catgttaaat gatcaagggt tatcaataga
    11041 tgactatgta ctatttccgg tacatccttg gcaatatcag catattctgc cgaacgtctt
    11101 tgcgaaagag attagtgaaa agttggttgt actattaccg ttaaaatttg gagattatct
    11161 gtcgtcttca agtatgcgtt cattaattga tattggcgca ccgtataacc atgtcaaagt
    11221 accatttgca atgcagtcat taggcgcatt aaggctaacg cctacgcgtt acatgaaaaa
    11281 cggagaacaa gcagaacaat tattacgtca gcttatagaa aaagatgaag cactagctaa
    11341 gtatgtcatg gtttgtgatg aaacagcttg gtggtcatat atgggtcaag ataatgatat
    11401 tttcaaagat caattaggtc atctaactgt tcagctaaga aagtatcccg aagtgctagc
    11461 caaaaatgat acgcaacagc tagtgtcaat ggcagcactc gcggcaaatg atcgcacttt
    11521 atatcaaatg atttgtggaa aagataatat ttctaaaaat gatgtcatga cgttatttga
    11581 agatatcgcg caagtctttt taaaggtaac actatcattt atgcaatacg gcgcattacc
    11641 agagttgcat ggtcaaaata tattgttgtc atttgaagat ggacgtgtac aaaaatgcgt
    11701 gttacgtgat catgatactg tcagaattta taaaccatgg ctaacagcac atcagctttc
    11761 attgccgaag tatgtcgtca gagaagatac acctaatacg ctaattaatg aggatttgga
    11821 aacattcttt gcttattttc aaacattagc tgtatcggta aatctatatg ccattattga
    11881 tgcaattcaa gatttatttg gtgtaagtga gcatgaactt atgtcgttgt taaaacaaat
    11941 tttaaaaaat gaagtggcaa ctatttcctg ggttacaact gatcagctag ctgtcagaca
    12001 cattttattt gataaacaga cgtggccatt caaacaaatt ttattaccat tgctatatca
    12061 acgtgatagt ggtggaggta gtatgccttc aggtttaact accgtaccaa atccaatggt
    12121 gacatatgat taatcagtct atatggcgca gtaactttcg cattttatgg ctcagtcagt
    12181 ttatagcgat tgctggactg acagtacttg tgccattatt gccaatttat atggcatcac
    12241 tacaaaatct atcagtcgta gaaatacagt tgtggagtgg tatagcgatt gctgctccag
    12301 ctgtaacgac gatgatagct tcgccgatat gggggaagct aggtgataag atcagccgaa
    12361 aatggatggt gttaagagcg ttacttggtt tggcggtatg cttattttta atggcattgt
    12421 gtacgacacc attacagttt gtacttgtga ggttattgca gggactattt ggtggtgttg
    12481 ttgatgcatc aagtgcgttt gcgagtgcag aggcgccagc tgaagatcgt ggaaaggtat
    12541 taggaagact gcaaagttca gtcagcgcag ggtctcttgt ggggccatta attggcggtg
    12601 ttacagcttc gatattaggt tttagtgcgt tactgatgag tattgccgtt attactttta
    12661 ttgtctgtat tttcggtgca ttaaaattga ttgaaacgac acatatgcca aaatcacaaa
    12721 caccaaatat taataaaggt attcgccgtt catttcaatg tctattatgc acacaacaaa
    12781 catgtcgatt tattatcgtt ggcgttttag caaactttgc tatgtatggc atgctaactg
    12841 cattatcacc acttgcttca tcagtgaatc atacagcgat agatgaccgt agtgtgattg
    12901 gatttttaca gtccgcattt tggacggctt cgatattaag cgcgccttta tggggacgct
    12961 ttaatgataa atcatatgtt aaatcagtat atatatttgc cacgattgca tgtggttgta
    13021 gtgcgatact gcaaggttta gcgacgaata tagagttttt aatggctgca agaatacttc
    13081 aaggattaac atatagtgca ttgattcaaa gtgtcatgtt tgttgtcgtg aatgcgtgtc
    13141 atcaacaact taaaggcaca tttgttggaa cgacgaacag tatgttagtt gttggtcaaa
    13201 ttattggcag tcttagtggc gctgccatta caagttatac tacaccagct actacgttta
    13261 tcgttatggg cgtagtattt gcagtaagta gtttattttt aatttgttca accatcacta
    13321 atcaaatcaa cgatcacaca ttaatgaaat tatgggagtt gaaacaaaaa agtgcaaaat
    13381 aaagaattaa tacaacatgc agcgtatgcg gctatcgaac gcattttaaa tgaatatttt
    13441 agagaagaaa atttatatca agtaccacct caaaatcatc aatggtctat acaattatca
    13501 gagctcgaaa ctttaacggg tgaatttcgc tattggtctg cgatggggca tcatatgtat
    13561 catccagagg tatggcttat cgatggaaaa agtaaaaaaa taacaactta taaagaagca
    13621 attgcgcgta ttttgcaaca tatggctcaa agtgcagata atcaaacggc agtgcaacaa
    13681 catatggcgc aaattatgtc tgacatcgat aatagcattc atcgcacggc acgttatttg
    13741 caaagtaaca caatagacta cgtagaggat cgttatatcg tttcagaaca atctttatac
    13801 ttaggtcatc catttcatcc gactcctaag agtgcaagtg ggttttcaga agcagattta
    13861 gagaaatatg cacccgaatg tcatacatca ttccaattgc attatttagc tgtgcatcaa
    13921 gatgttctgc tcacgcgcta tgtagaaggt aaagaagatc aggttgagaa agtgttgtat
    13981 caattagcag acatagatat atcagagata cccaaagatt ttattttatt accaacacat
    14041 ccttatcaaa tcaatgtgtt gcgacagcat ccacagtata tgcaatatag tgaacaaggt
    14101 ttaataaaag accttggcgt ttccggtgat tcagtgtacc cgacgtcttc ggttagaact
    14161 gtattttcaa aagcattaaa catttattta aaattaccga tacacgttaa aatcactaat
    14221 tttatacgta cgaatgacct tgaacagatt gaacggacaa ttgatgccgc gcaagttatc
    14281 gcatcagtca aagatgaggt tgaaacaccc cattttaaat tgatgtttga agaaggatat
    14341 cgtgcattgt taccgaatcc attagggcaa acagttgaac ctgaaatgga tttattaaca
    14401 aatagtgcca tgattgttcg tgaagggata ccgaattacc atgctgataa agatattcat
    14461 gtattggcgt cattatttga aacgatgcct gattcaccga tgtctaagtt atcacaagtg
    14521 attgagcaaa gtggtttagc accagaagca tggcttgaat gttatttgaa tcgtacatta
    14581 ttgccgatat taaagctgtt tagtaacaca ggcattagtc tagaagcaca tgtacaaaat
    14641 acattaattg aattaaaaga tggcataccc gacgtatgct ttgtcagaga tcttgaaggc
    14701 atttgtctat ctagaacgat tgctactgaa aaacagcttg tgccaaatgt tgtggcagca
    14761 tcaagccctg ttgtatatgc acatgatgaa gcatggcatc gtcttaaata ttacgttgta
    14821 gtaaatcact taggacattt agtatcaact attggtaaag cgactagaaa tgaagttgtg
    14881 ttatggcaac ttgtagcgca tcgtcttatg acttggaaaa aagaatacgc gaataacgca
    14941 gtatttgttg actgtgtaga agatttatat caaacgccga ccattgcggc taaagcgaat
    15001 ttgatgagta aattgaatga ttgtggtgca aaccctattt atacacatat accaaatcca
    15061 atttgtcata acaaggaggt atcgtattgt gaatcaaaca attcttaatc gtgtaaagac
    15121 tagagtgatg caccaactgg tatcatcact tatttatgag aatattgttg tgtataaagc
    15181 gtcatatcaa gacggtgtcg gtcattttac aatagaagga catgattcag agtatcgttt
    15241 tactgctgaa aagacacata gctttgatcg tatacgtatc acatcaccaa ttgagcgtgt
    15301 cgtaggagat gaggcagata caacaacaga ctatacacaa ttattgagag aggttgtatt
    15361 tacatttcct aaaaatgatg aaaagctaga acaatttatt gtcgagttat tacagacaga
    15421 attaaaagat acgcaaagta tgcagtatcg agaatcaaac ccaccagcaa cacctgagac
    15481 atttaacgac tatgaatttt atgcgatgga agggcatcag tatcatccaa gttacaaatc
    15541 acgtttagga tttacgttga gtgataattt gaaatttggt cctgattttg taccaaacgt
    15601 taaactgcag tggttagcta tcgacaaaga taaagtagaa acgacggtat caagaaatgt
    15661 tgtagttaac gaaatgttac gtcaacaagt tggcgataag acttatgaac attttgtaca
    15721 gcaaattgaa gcatctggca aacatgtaaa tgatgttgag atgatacctg tacacccatg
    15781 gcagtttgaa catgtcatcc aagttgattt ggctgaagaa aggcttaatg gcacagtact
    15841 atggttaggg gaaagtgatg agctatatca ccctcaacaa tcgattcgta cgatgtcgcc
    15901 aatagacacg acaaaatatt atttaaaggt accaataagt ataacgaaca cttcaacgaa
    15961 acgagtgttg gcgcctcata caattgaaaa tgcagcgcaa attacggatt ggttaaagca
    16021 gatacagcaa caagatatgt atttaaaaga tgaattaaag acagtttttc taggggaagt
    16081 cttaggacag tcttatttaa atacacaact ttcgccttat aaacaaactc aagtttatgg
    16141 tgcgttaggt gttatatggc gtgaaaatat atatcatatg ttaatcgatg aagaggatgc
    16201 gataccattt aatgcacttt atgcaagtga taaggatggt gtaccattca ttgaaaattg
    16261 gattaaacaa tatggttctg aagcttggac aaagcaattt ttagctgtag cgattcgtcc
    16321 aatgattcat atgctttatt atcacggtat tgcctttgaa tcgcatgcac aaaatatgat
    16381 gctcattcat gaaaatggtt ggcctacacg tattgcctta aaagatttcc atgatggtgt
    16441 tcgttttaag cgtgagcatt taagtgaagc tgcttcacac ctgacattaa agccaatgcc
    16501 agaagcacat aaaaaagtga atagtaattc atttattgaa acagatgacg aacgtttagt
    16561 acgcgacttt ttacatgatg catttttctt tattaatatc gccgaaatca tcttatttat
    16621 tgaaaagcaa tatggtatcg atgaggagct gcaatggcaa tgggttaaag gcatcatcga
    16681 ggcgtatcaa gaagcatttc cagagttgaa taactatcaa catttcgatt tgtttgaacc
    16741 tacgattcaa gttgaaaagt taacgacacg tcgattatta agtgactccg agttaagaat
    16801 tcatcatgtt acaaatccat taggtgtagg aggtatcaat gatgcaacaa ctatctctga
    16861 aacatagatt aaacaatggt gattcagttt atggcatttt taattctata ccggacccat
    16921 tgatgatcga ggttatcgca gcaagcgggt atgactttgt tgtgattgat acagaacacg
    16981 tggcgattaa tgatgagaca ctagcgcatt taattcgtgc agctgaagca gcgcatatta
    17041 taccaattgt acgtgtcact gcagtgatag atagagatat cattaaagtg ttggatatgg
    17101 gtgcgagagg tattattgtg ccacacgtta aagatcgtga gacagttgag catattgtga
    17161 aattaagtcg ttattacccg caaggattaa gaagtttgaa tggtggtcgc atggcaagat
    17221 ttggacgtac accattactt gatgcaatgg agatggctaa tgagcatatt atggtgattg
    17281 ccatgataga agatgttgaa ggggttatgg ccattgacga tatagcacaa gtcgaaggtt
    17341 tagacatgat agtcgaaggt gccgcagatt tatcgcagtc acttggcata ccatggcaaa
    17401 cgcgtgatga tcaagtaaca tcacatgttc aacatatttt tgaagttgtg aatgcacatg
    17461 gtaaacattt ttgtgcatta ccacgtgaag atgaagatat tgcaaaatgg caggcacaag
    17521 gtgtacaaac atttatttta ggtgatgatc gcggaaaaat atatcgccat ttaagtgcat
    17581 ctctagcgac gtctaaacag aaaggggatg aaggctaatg cgtatagttc aacctgttat
    17641 tgaacaatta aaagcacaat ctcatccagt ttgtcattat atctatgatt tagtcggact
    17701 ggaacatcat ttgcaacata ttacatcgtc attgccgagt aattgtcaaa tgtactatgc
    17761 aatgaaagca aatagtgaac gaaaaatcct agatacaatt agtcagtatg ttgaaggatt
    17821 cgaagttgca tctcaaggtg aaatagcaaa aggtcttgct tttaaaccag caaatcatat
    17881 tatttttggt ggccctggta agacagacga ggaactaaga tatgcagtaa gtgaaggtgt
    17941 tcagcgtatt catgttgaaa gtatgcatga attacaacgg ctaaatgcca tcttagaaga
    18001 tgaagataag acacaacaca ttttattgcg tgttaattta gcaggaccat ttcccaatgc
    18061 aacgttgcat atggcaggac gcccaacaca atttggtatt tctgaagacg aagttgatga
    18121 tgtcattgaa gctgcgctcg caatgccaaa gattcatcta gatggatttc attttcattc
    18181 tatttctaac aatttagact cgaatttaca tgtcgatgta gtgaaacttt attttaaaaa
    18241 agcaaaggca tggtctgaaa aacatcgatt tccactcaaa catatcaatc ttggtggtgg
    18301 cataggcgtt aactatgcag atttaactaa ccaatttgaa tgggataatt ttgtagaacg
    18361 ttttaaaaca cttatcgttg agcaagaaat ggaagatgtg acattgaact ttgaatgtgg
    18421 gcgctttatt gtggcacata ttggttacta tgtgacagaa gtgctagaca ttaagaaagt
    18481 acatggtgct tggtatgcca tattaagagg aggtacgcaa caatttagac tgccggtatc
    18541 ttggcaacat aaccatcctt ttgacattta tcgctataag gacaatccat attcatttga
    18601 aaaagtttca atttcgagac aggacacaac gttagtcggt caattatgta caccgaaaga
    18661 tgtctttgct agagaagtac agatagacgc aatcagtaca ggcgacgtta ttgttttcaa
    18721 atatgcaggt gcatacggat ggtctatttc acatcacgat ttcttaagcc atccacatcc
    18781 tgaatttatt tatttaacgc aaacaaagga ggatgaataa ctattgaatc atattcatga
    18841 acatttaaaa ttggtaccag tagataagat tgatcttcac gaaacattcg aacctttaag
    18901 attggaaaaa acgaaaagta gtattgaagc agatgatttt atacgtcatc ctattttagt
    18961 gacagcgatg caacatggta gatatatggt tatagatggt gtgcatcggt atacaagttt
    19021 gaaagcgtta ggatgtaaga aagttccagt gcaagaaatc catgaaacac aatattcaat
    19081 tagtacatgg caacataaag ttccatttgg tgtgtggtgg gaaacgttac aacaagaaca
    19141 tcgcttgcca tggactactg agacaagaca agaagcgcca tttattacaa tgtgtcatgg
    19201 tgatacagaa caatatttgt atacaaaaga tttaggcgaa gcacattttc aagtatggga
    19261 aaaggttgtc gcaagttata gtggttgttg ttctgtagag agaattgcac aaggtacata
    19321 tccttgtctt tctcaacaag atgtactcat gaagtatcag ccattgagtt ataaggaaat
    19381 tgaagcggtt gttcataaag gggaaactgt gccagcaggt gtgacacgct ttaatatttc
    19441 aggacgatgt cttaatcttc aagtaccact ggcattactt aaacaagatg atgatgttga
    19501 acaactgcgc aattggaagc agtttttagc agataagttt gccaatatga gatgctatac
    19561 tgaaaaagta tacttggtgg agcaatagtt ttactgtgat gttgagggaa atatgatgat
    19621 ttagcgtatt gatagcgaaa atataataaa acaatatagt gtggagaact tttgatattt
    19681 tataaatatt gaagttctcc atttttgtat tttgcatata aaaattaaat aaaataaggt
    19741 atattaaggt aaagtataaa ttttaaataa atggggaatg agtatgagct caattatagg
    19801 aaaaatagca atttggatag gcatcgtagc tcaaatatat tttagtgtcg tttttgttag
    19861 gatgatatct attaatattg ctggaggatc tgattacgaa acaatttttt tattaggatt
    19921 aatattggct cttttcactg ttttaccaac catctttact gcgatttata tggaaagtta
    19981 ctctgtaatc ggaggtgcac tttttattgt ttatgctatt attgcactgt gtttatataa
    20041 tttcctttcg tcaattttat ggctgattgg tggtattttg ctgatttgga ataaatactc
    20101 aaaagatgaa tcgacagacg aaaatgaaaa agttgatatt gaaagtacag agaa
//
LOCUS       DALPQQ010000036        20018 bp    DNA     linear   BCT 22-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus strain K18-6-464
            SAMD00233528-rid16434743.denovo.036, whole genome shotgun sequence.
ACCESSION   DALPQQ010000036 DALPQQ010000000
VERSION     DALPQQ010000036.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMD00233528
            Sequence Read Archive: DRR236061
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 20018)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 20018)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001543423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001543423.1
            Genome Coverage       :: 77x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/22/2022 17:09:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,811
            CDSs (total)                      :: 2,743
            Genes (coding)                    :: 2,689
            CDSs (with protein)               :: 2,689
            Genes (RNA)                       :: 68
            rRNAs                             :: 2, 4, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 4, 2 (16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 54
            CDSs (without protein)            :: 54
            Pseudo Genes (ambiguous residues) :: 0 of 54
            Pseudo Genes (frameshifted)       :: 27 of 54
            Pseudo Genes (incomplete)         :: 27 of 54
            Pseudo Genes (internal stop)      :: 10 of 54
            Pseudo Genes (multiple problems)  :: 10 of 54
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..20018
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMD00233528-rid16434743.denovo.036"
                     /strain="K18-6-464"
                     /db_xref="taxon:1280"
                     /geo_loc_name="Japan: Niigata"
     gene            complement(<1..3572)
                     /gene="addA"
                     /locus_tag="O7798_001118"
     CDS             complement(<1..3572)
                     /gene="addA"
                     /locus_tag="O7798_001118"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499458.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helicase-exonuclease AddAB subunit AddA"
                     /protein_id="HDC2863385.1"
                     /translation="MTIPEKPQGVIWTDAQWQSIYATGQDVLVAAAAGSGKTAVLVER
                     IIQKILRDGIDVDRLLVVTFTNLSAREMKHRVDQRIQEASIADPANAHLKNQRIKIHQ
                     AQISTLHSFCLKLIQQHYDVLNIDPNFRTSSEAENILLLEQTIDEVIEQHYDILDPAF
                     IELTEQLSSDRSDDQFRMIIKQLYFFSVANPNPTNWLDQLVTPYEEEAQQAQLIQLLT
                     DLSKVFITAAYDALNKAYDLFSMMDSVDKHLAVIEDERRLMGRVLEGGFIDIPYLTGH
                     EFGARLPNVTAKIKEANEMMVDALEDAKLQYKKYKSLIDKVKSDYFSREADDLKADMQ
                     QLAPRVKYLARIVKDVMSEFNRKKRSKNILDFSDYEHFALQILTNEDGSPSEIAESYR
                     QHFQEILVDEYQDTNRVQEKILSCIKTGDEHNGNLFMVGDVKQSIYKFRQADPSLFIE
                     KYQRFTIDGDGTGRRIDLSQNFRSRKEVLSTTNYIFKHMMDEQVGEVKYDEAAQLYYG
                     APYDESDHPVNLKVLVEADQEHSDLTGSEQEAHFIVEQVKDILEHQKVYDMKTGSYRS
                     ATYKDIVILERSFGQARNLQQAFKNEDIPFHVNSREGYFEQTEVRLVLSFLRAIDNPL
                     QDIYLVGLMRSVIYKFKEDELAQIRILSPNDDYFYQSIVNYINDEAADAILVDKLKMF
                     LSDIQSYQQYSKDHPVYQLIDKFYNDHYVIQYFSGLIGGRGRRANLYGLFNKAIEFEN
                     SSFRGLYQFIRFIDELIERGKDFGEENVVGPNDNVVRMMTIHSSKGLEFPFVIYSGLS
                     KDFNKRDLKQPVILNQQFGLGMDYFDVDKEMAFPSLASVAYRAVAEKELVSEEMRLVY
                     VALTRAKEQLYLIGRVKNDKSLLELEQLSISGEHIAVNERLTSPNPFHLIYSILSKHQ
                     SASIPDDLKFEKDIAQIEDSSRPNVNISIVYFEDVSTETILDNDEYRSVNQLETMQNG
                     NEDVKAQIKHQLDYRYPYVNDTKKPSKQSVSELKRQYETEESGTSYERVRQYRIGFST
                     YERPKFLSEQGKRKANEIGTLMHTVMQHLPFKKERISEVELHQYIDGLIDKHIIEADA
                     KKDIRMDEIMTFINSELYSIIAEAEQVYRELPFVVNQALVDQLPQGDEDVSIIQGMID
                     LIFVKDGVHYFVDYKTDAFNRRRGMTDEEIGTQLKNKYKIQMKY"
     gene            complement(3573..7049)
                     /gene="addB"
                     /locus_tag="O7798_001119"
     CDS             complement(3573..7049)
                     /gene="addB"
                     /locus_tag="O7798_001119"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499457.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helicase-exonuclease AddAB subunit AddB"
                     /protein_id="HDC2863386.1"
                     /translation="MTLHAYLGRAGTGKSTKMLTEIKQKMKADPLGDPIILIAPTQST
                     FQLEQAFVNDPELNGSLRTEVLHFERLSHRIFQEVGSYSEQKLSKAATEMMIYNIVQE
                     QQKYLKLYQSQAKYYGFSEKLTEQIQDFKKYAVTPEHLEHFIADKNMQTRTKNKLEDI
                     ALIYREFEQRIQNEFITGEDSLQYFIDCMPKSEWLKRADIYIDGFHNFSTIEYLIIKG
                     LIKYAKSVTIILTTDGNHDQFSLFRKPSEVLRHIEEIANELNISIERQYFNQLYRFNN
                     QDLKHLEQEFDALQINRVACQGHINILESATMREEINEIARRIIVDIRDKQLRYQDIA
                     ILYRDESYAYLFDSILPLYNIPYNIDTKRSMTHHPVMEMIRSLIEVIQSNWQVNPMLR
                     LLKTDVLTASYLKSAYLVDLLENFVLERGIYGKRWLDDELFNVEHFSKMGRKAHKLTE
                     DERNTFEQVVKLKKDVIDKILHFEKQMSQAETVKDFATAFYESMEYFELPNQLMTERD
                     ELDLNGNHEKAEEIDQIWNGLIQILDDLVLVFGDEPMSMERFLEVFDIGLEQLEFVMI
                     PQTLDQVSIGTMDLAKVDNKQHVYLVGMNDGTMPQPVTASSLITDEEKKYFEQQANVE
                     LSPTSDILQMDEAFVCYVAMTRAKGDVTFSYSLMGSSGDDKEISPFLNQIQSLFNQLE
                     ITNIPQYHEVNPLSLMQHAKQTKITLFEALRAWLYDEIVADSWLDAYQVIRDSDHLNQ
                     GLDYLMSALTFDNETVKLGETLSKDLYGKEINASVSRFEGYQQCPFKHYASHGLKLNE
                     RTKYELQNFDLGDIFHSVLKYISERINGDFKQLDLKKIRQLTNEALEEILPKVQFNLL
                     NSSAYYRYLSRRIGAIVETTLSALKYQGTYSKFMPKHFETSFRRKPRTNDELIAQTLT
                     TTQGIPINIRGQIDRIDTYTKNDTSFVNIIDYKSSEGSATLDLTKVYYGMQMQMMTYM
                     DIVLQNKQRLGLTDIVKPGGLLYFHVHEPRIKFKSWSDIDEDKLEQDLIKKFKLSGLV
                     NADQTVIDALDIRLEPKFTSDIVPVGLNKDGSLSKRGSQVADEATIYKFIQHNKENFI
                     ETASNIMDGHTEVAPLKYKQKLPCAFCSYQSVCHVDGMIDSKRYRTVDETINPIEAIQ
                     NININDEFGGEQ"
     gene            complement(7209..7784)
                     /gene="lepB"
                     /locus_tag="O7798_001120"
     CDS             complement(7209..7784)
                     /gene="lepB"
                     /locus_tag="O7798_001120"
                     /EC_number="3.4.21.89"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002465318.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="signal peptidase I"
                     /protein_id="HDC2863387.1"
                     /translation="MKKEILEWIISIAVAFVILFIVGKFIVTPYTIKGESMDPTLKDG
                     ERVAVNIVGYKTGGLEKGNVVVFHANKNDDYVKRVIGVPGDKVEYKNDTLYVNGKKQD
                     EPYLNYNLKHKQGDYITGTFQVKDLPNANPKSNVVPKGKYLVLGDNREVSKDSRAFGL
                     IDEDQIVGKVSFRFWPFSEFKHNFNPENTKN"
     gene            complement(7800..8324)
                     /gene="lepB"
                     /locus_tag="O7798_001121"
     CDS             complement(7800..8324)
                     /gene="lepB"
                     /locus_tag="O7798_001121"
                     /EC_number="3.4.21.89"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499455.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="signal peptidase I"
                     /protein_id="HDC2863388.1"
                     /translation="MKKVVKYLISLILAIIIVLFVQTFVIVGHVIPNNDMSPTLNKGD
                     RVIVNKIKVTFNQLNNGDIITYRRGNEIYTSRIIAKPGQSMAFRQGQLYRDDRPVDAS
                     YAKNRKIKDFSLRNFKELDGDIIPPNNFVVLNDQDNNKHDSRQFGLIDKKDIIGNVSL
                     RYYPFSKWTVQFKS"
     gene            complement(8329..8904)
                     /locus_tag="O7798_001122"
     CDS             complement(8329..8904)
                     /locus_tag="O7798_001122"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499454.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TVP38/TMEM64 family protein"
                     /protein_id="HDC2863389.1"
                     /translation="MSFHQVEEWFEIFRQFGYLPGFILLYIRAIIPVFPLALYILINI
                     QAYGPILGILISWLGLISGTFTVYLICKRLVNTERMQRIKQRTAVQRLISFIDRQGLI
                     PLFILLCFPFTPNTLINFVASLSHIRPKYYFIVLASSKLVSTIILGYLGKEITTILTH
                     PLRGILMLVVLVVFWIVGKKLEQHFMGSKKE"
     gene            complement(9229..10560)
                     /locus_tag="O7798_001123"
     CDS             complement(9229..10560)
                     /locus_tag="O7798_001123"
                     /EC_number="5.3.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499453.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucose-6-phosphate isomerase"
                     /protein_id="HDC2863390.1"
                     /translation="MTHIQLDFSKTLEFFGEHELKQQQEIVKSIHKTIHEGTGAGSDF
                     LGWVDLPVDYDKEEFSRIVEASKRIKENSDVLVVIGIGGSYLGARAAIEMLTSSFRNS
                     NEYPEIVFVGNHLSSTYTKELVDYLADKDFSVNVISKSGTTTEPAVAFRLFKQLVEER
                     YGKEEAQKRIFATTDKEKGALKQLATNEGYETFIVPDDVGGRYSVLTAVGLLPIATAG
                     INIEAMMIGAAKAREELSSDKLEENIAYQYATIRNILYAKGYTTEMLINYEPSMQYFN
                     EWWKQLFGESEGKDFKGIYPSSANYTTDLHSLGQYVQEGRRFLFETVVKVNHPKYDIT
                     IEKDSDDLDGLNYLAGKTIDEVNTKAFEGTLLAHTDGGVPNMVVNIPQLDEETFGYVV
                     YFFELACAMSGYQLGVNPFNQPGVEAYKQNMFALLGKPGFEDLKKELEERL"
     gene            10911..12116
                     /locus_tag="O7798_001124"
     CDS             10911..12116
                     /locus_tag="O7798_001124"
                     /EC_number="6.3.4.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499452.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="argininosuccinate synthase"
                     /protein_id="HDC2863391.1"
                     /translation="MKEKIVLAYSGGLDTSVAVQWLIDKGYDVVACCLDVGEGKDLDI
                     VYKKALDMGAVECHIIDATKEFSDEYVSYAIKGNLMYENAYPLVSALSRPLIAKKLVE
                     IAEKTNSVGIAHGCTGKGNDQVRFEVAIKALNPSLKAFAPVREWAWSREEEIDYAIKH
                     NIPVSINHDSPYSIDQNLWGRANECGILEDPYAAPPEDAFDLTNALEETPDTADEIIL
                     TFDKGIPVQIDGKTYELDDLILTLNALAGKHGIGRIDHVENRLVGIKSREIYEAPAAE
                     VILKAHKALETITLTKDVAHFKPIIEKQFAEQLYNGLWFSPLTDSLKLFIDSTQQYVS
                     GDVRIKLFKGNAIVNGRKSPYTLYDEKLATYTKEDAFNQDAAVGFIDIYGLPTQVNAM
                     LHGGYSNEQ"
     gene            12106..13485
                     /gene="argH"
                     /locus_tag="O7798_001125"
     CDS             12106..13485
                     /gene="argH"
                     /locus_tag="O7798_001125"
                     /EC_number="4.3.2.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499451.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="argininosuccinate lyase"
                     /protein_id="HDC2863392.1"
                     /translation="MSNKAWGGRFEVQPEEWVDDFNASITFDQTLIDQDIEGSIAHAT
                     MLANQGIISQQDSEQIIQGLKSIQHDYHQDQIQFSASLEDIHLNIEHELIKRIGDAGG
                     KLHTGRSRNDQVATDMHLYTKKQVQDIIALIKSLQSVIVDIASNNVDTIMPGYTHLQR
                     AQPISFAHHIMTYFWMLQRDQQRFEDSLKRIDINPLGAAALSGTTYPIDRHETTALLN
                     FGSLYENSLDAVSDRDYIIETLHNISLTMVHLSRFAEEIIFWSTDEAKFITLSDAFST
                     GSSIMPQKKNPDMAELIRGKVGRTTGHLMSMLMTLKGLPLAYNKDMQEDKEGLFDAVH
                     TIKGSLRIFEGMIQTMTINKERLNQTVKEDFSNATELADYLVTKNIPFRTAHEIVGKI
                     VLECIQQGHYLLDVPLATYQQHHSSIDADIYDYLQPENCLKRRQSYGSTGQSSVKQQL
                     DVAKQLLSQ"
     gene            13727..14656
                     /locus_tag="O7798_001126"
     CDS             13727..14656
                     /locus_tag="O7798_001126"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499450.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycerophosphodiester phosphodiesterase"
                     /protein_id="HDC2863393.1"
                     /translation="MTNSSKSFTKFMAASAVFTMGFLSVPTAGAEQTNQIANKPQAIQ
                     WHTNLTNERFTTIAHRGASGYAPEHTFQAYDKSHNELKASYIEIDLQRTKDGHLVAMH
                     DETVNRTTNGHGKVEDYTLDELKQLDAGSWFNKKYPKYARASYKNAKVPTLDEILERY
                     GPNANYYIETKSSDVYPGMEEQLLASLKKHHLLNNNKLKNGHVMIQSFSDESLKKIHR
                     QNKHVPLVKLVDKGELQQFNDQRLKEIRSYAIGLGPDYTDLTEQNTHHLKDLGFIVHP
                     YTVNEKADMLRLNKYGVDGVFTNFADKYKEVIK"
     gene            complement(15045..16289)
                     /locus_tag="O7798_001127"
     CDS             complement(15045..16289)
                     /locus_tag="O7798_001127"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499448.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Glu/Leu/Phe/Val dehydrogenase"
                     /protein_id="HDC2863394.1"
                     /translation="MTENNNLVTSTQGIIKEALHKLGFDEGMYDLIKEPLRMLQVRIP
                     VRMDDGTVKTFTGYRAQHNDAVGPTKGGVRFHPDVDEEEVKALSMWMTLKCGIVNLPY
                     GGGKGGIVCDPRQMSIHEVERLSRGYVRAISQFVGPNKDIPAPDVFTNSQIMAWMMDE
                     YSALDKFNSPGFITGKPIVLGGSHGRDRSTALGVVIAIEQAAKRRNMQIEGAKVVIQG
                     FGNAGSFLAKFLYDLGAKIVGISDAYGALHDPNGLDIDYLLDRRDSFGTVTNLFEETI
                     SNKELFELDCDILVPAAISNQITEDNAHDIKASIVVEAANGPTTPEATRILTERGILL
                     VPDVLASAGGVTVSYFEWVQNNQGYYWSEEEVNEKLREKLEAAFDTIYELSQNRKIDM
                     RLAAYIIGIKRTAEAARYRGWA"
     gene            complement(16398..17588)
                     /locus_tag="O7798_001128"
     CDS             complement(16398..17588)
                     /locus_tag="O7798_001128"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499447.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ornithine--oxo-acid transaminase"
                     /protein_id="HDC2863395.1"
                     /translation="MTKSEKIIELTNHYGAHNYLPLPIVISEAEGVWVKDPEGNKYMD
                     MLSAYSAVNQGHRHPKIIQALKDQADKVTLVSRAFHSDNLGEWYEKICKLAGKDKALP
                     MNTGAEAVETALKAARRWAYDVKGIEPNKAEIIAFNGNFHGRTMAPVSLSSEAEYQRG
                     YGPLLDGFRKVDFGDVDALKAAINENTAAVLVEPIQGEAGINIPPEGYLKAIRELCDE
                     HNVLFIADEIQAGLGRSGKLFATDWDNVKPDVYILGKALGGGVFPISVVLADKEVLDV
                     FTPGSHGSTFGGNPLACAASIAALDVIVDEDLPGRSLELGDYFKEQLKQIDHPSIKEV
                     RGRGLFIGVELNESARPYCEALKEEGLLCKETHDTVIRFAPPLIITKEELDLALEKIR
                     HVFQ"
     gene            complement(17896..19023)
                     /locus_tag="O7798_001129"
     CDS             complement(17896..19023)
                     /locus_tag="O7798_001129"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499446.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-dependent flavin oxidoreductase"
                     /protein_id="HDC2863396.1"
                     /translation="MKSKYEPLFDKVELPNGVELRNRFVLAPLTHISSNDDGTISDVE
                     LPYIEKRSQDVGITINAASNVSDVGKAFPGQPSIAHDSNIEGLKRLATAMKKNGAKAL
                     VQIHHGGAQALPELTPDGDVVAPSPISLKSFGQKQEHSAREMTNEEIEQAIKDFGEAT
                     RRAIEAGFDGVEIHGANHYLIHQFVSPYYNRRNDVWANQYKFPVAVIEEVLKAKEAYG
                     NKDFIVGYRLSPEEAESPGITMEITEELVNKISHMPIDYIHVSMMDTHATTREGKYAG
                     QERLPLIHKWINGRMPLIGIGSIFTADEALDAVENVGVDLVAIGRELLLDYQFVEKIK
                     DGREDEIINYFDPEREDNHHLTPNLWHQFNEGFYPLPRKDK"
     gene            complement(19385..19762)
                     /locus_tag="O7798_001130"
     CDS             complement(19385..19762)
                     /locus_tag="O7798_001130"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001067296.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S1 RNA-binding domain-containing protein"
                     /protein_id="HDC2863397.1"
                     /translation="MNNYKIGQHIKVRVTGIQPYGAFVETPNHTEGLIHISEIMDDYV
                     HNLKKFLSEGQIVKAKILSIDDEGKLNLSLKDNDYFKNYERKKEKQSVLDEIRETEKY
                     GFQTLKERLPIWIKQSKRAIRND"
BASE COUNT         6434 a         3682 c         2937 g         6965 t
ORIGIN      
        1 taatatttca tctgtatctt atatttattt tttaattgtg taccaatttc ttcatctgtc
       61 atcccacggc gacgattaaa tgcatcggtt ttatagtcta caaaataatg cacaccatct
      121 ttaacaaaga ttaagtcaat cataccttga ataattgaga cgtcttcgtc tccttgtggc
      181 aattggtcaa ctaatgcttg gttaactaca aacggtaatt cacgataaac ttgctctgct
      241 tcagcaataa tcgaatataa ctcactattg ataaatgtca ttatttcatc catacggata
      301 tcttttttcg catctgcttc gataatatgt ttatcgatta atccatcgat atactgatgt
      361 aactcaactt cagatatgcg ttcttttttg aatggtaaat gttgcatcac tgtatgcatt
      421 aacgtaccaa tttcattcgc ttttcgttta ccttgttcac ttagaaattt aggtcgttca
      481 tacgttgaaa aaccgatacg atattgcctt actcgttcgt aacttgtgcc actttcttct
      541 gtttcatatt gtcttttcaa ttcagaaaca gattgttttg agggcttttt agtatcattt
      601 acatatggat atcgataatc aagttggtgt ttaatttgtg ctttaacatc ttcattacca
      661 ttttgcatag tttctaattg attaaccgaa cgatattcat cattatctaa aatggtttct
      721 gtagacacat cttcaaagta cacaattgaa atatttacat tcggacgact actatcttca
      781 atttgtgcta tatctttttc aaattttaaa tcatctggaa ttgacgcaga ttgatgttta
      841 gataaaatac tataaataag atggaacgga tttggtgaag ttaatcgttc attgacagca
      901 atgtgctcac cagaaataga caattgctct agttctagta atgatttatc atttttcact
      961 ctaccaatta aataaagttg ttctttcgct cttgttaatg ctacatagac taatcgcatt
     1021 tcttctgaca caagttcttt ttcggcaaca gctctatatg caaccgaagc taaagatgga
     1081 aatgccattt ctttatccac atcaaaataa tccattccga gaccaaattg ctgatttaaa
     1141 ataactggtt gtttcaaatc acgtttatta aaatcttttg acaatccaga ataaatgaca
     1201 aatggaaact ctagaccttt actactatga attgtcatca ttctaacgac attatcgttt
     1261 ggaccaacta cattttcctc accaaaatct ttgcctcttt caatcaattc atcgataaaa
     1321 cgaataaatt gatataaacc tctaaaactt gaattctcaa actcgatagc tttattaaat
     1381 aaaccataaa gatttgcacg tcgtccacgt ccaccaataa gtccactaaa gtattgaata
     1441 acataatgat cattataaaa tttatcaatt aactgataca ccggatgatc tttactatat
     1501 tgttggtaac tttgaatatc tgataaaaac atttttaatt tatcaactaa aattgcatct
     1561 gctgcttcgt cattaatgta atttacaatc gattgataga agtagtcatc atttggactc
     1621 aatattctaa tttgagctaa ttcgtcttct ttgaacttat atataacgga gcgcattaac
     1681 ccaactaaat aaatatcttg taatggatta tctatcgctc ttaaaaatga taatactaag
     1741 cggacttctg tttgttcaaa gtaaccttca cgactattca catggaatgg aatatcttca
     1801 tttttaaagg cttgttgtaa attgcgagct tgtccaaagc tgcgttctag aataacgata
     1861 tccttgtatg tcgcacttct atagcttcct gttttcatat cataaacttt ttgatgttct
     1921 aagatatctt taacttgttc tactataaaa tgcgcttctt gttcactacc agttaaatca
     1981 ctatgttctt gatccgcttc aacaaggact tttaagttta ctggatggtc cgattcatca
     2041 tatggtgcac cataatacaa ctgtgccgct tcatcatatt ttacttcacc gacttgttca
     2101 tccatcatat gtttgaatat atagttagtc gttgacagta cttcttttcg agaacggaag
     2161 ttttgcgaca aatcaattcg acgtccagtg ccatctccat ctatagtaaa gcgttgatac
     2221 ttttcaataa ataaacttgg atcagcttgt ctaaatttat aaatggattg cttaacatct
     2281 ccaaccataa ataaattacc attatgttca tcacccgttt tgatgcaaga tagtattttc
     2341 tcttgaactc ggttcgtatc ttgatactca tcgaccaata tttcttggaa gtgttgacgg
     2401 tatgattcgg caatttctga aggcgaacca tcctcattag ttaaaatttg taatgcaaaa
     2461 tgttcataat cagaaaaatc caaaatattt ttgctacgct tttttcgatt gaattctgac
     2521 ataacatctt tcacaatacg cgcaaggtac tttactcgtg gcgccaattg ttgcatatca
     2581 gctttcaaat catcagcttc tcttgaaaag taatcactct tcactttatc aattaatgat
     2641 ttatattttt tatactgaag tttagcatct tctaaggcat cgaccatcat ttcatttgct
     2701 tctttaattt tcgctgttac attaggcaaa cgcgcgccaa attcgtgacc agttaaataa
     2761 ggtatatcaa taaagccacc ttctaaaaca cgccccatta aacgtcgttc atcttctata
     2821 acagctaaat gtttatcgac gctatccatc atactaaaca aatcatacgc cttatttaaa
     2881 gcatcataag cagctgtgat aaatacttta gataagtctg ttagtagttg aataagttgc
     2941 gcttgttgtg cttcttcttc gtatggtgtc accaattgat ccaaccaatt tgtaggattt
     3001 ggatttgcaa cgctaaagaa atacaattgt ttaataatca ttcgaaactg atcatcactt
     3061 ctatctgaag acaattgctc tgttaattca ataaaagcag gatcaaggat atcgtaatgt
     3121 tgttctatga cctcatctat cgtttgttct aataataaaa tattttcagc ttcactgctt
     3181 gttctaaagt tcgggtcaat atttaataca tcataatgct gttgaattaa tttcaagcaa
     3241 aaactatgga gtgtagatat ttgtgcttga tgaattttga tgcgttggtt tttcaagtgt
     3301 gcatttgcag gatcagcaat cgatgcctct tgaatacgtt ggtctacacg atgcttcatt
     3361 tcacgtgcgc ttaagtttgt aaacgttacg actaaaagtc gatcgacatc aatgccatca
     3421 cgtaaaatct tttggataat acgctcaact agtacagctg ttttacctga acctgccgcg
     3481 gctgcaacaa gtacatcttg tccagttgcg taaatacttt gccattgcgc gtcagtccaa
     3541 atcacgcctt gtggtttctc tggaattgtc atctattgct cacccccaaa ttcatcatta
     3601 atgttaatat tttgaattgc ttcaattgga tttattgttt catctacagt tcgatatcgc
     3661 ttactatcaa tcatgccatc tacatgacat accgattgat aactacaaaa agcacatggc
     3721 aatttttgtt tgtactttaa tggtgcaact tcagtatgtc catccataat atttgaagct
     3781 gtttctataa aattctcttt gttatgttgg atgaatttat aaatcgttgc ttcatctgcc
     3841 acttggctgc ctcgtttact caaagagcca tctttattca aaccaactgg tacaatatct
     3901 gaagtgaatt taggttctaa acgaatatcc aatgcatcaa taacagtttg gtctgcatta
     3961 actaaaccac tcaacttaaa ctttttaatt aaatcttgtt ctagtttatc ttcatcaata
     4021 tcagaccatg atttaaattt aattctaggt tcatgtacat ggaagtataa taatccacct
     4081 ggtttcacaa tatctgttaa tccaaggcgt tgtttatttt gtaaaacgat atccatgtat
     4141 gtcatcattt gcatttgcat accataatat actttcgtta aatcaagtgt cgcactacct
     4201 tcagaggatt tatagtcaat gatattaaca aaacttgtat cattctttgt atacgtatcg
     4261 atacggtcaa tttgccctct aatattaatt ggaatacctt gagttgtcgt taatgtttgt
     4321 gcaattaatt cgtcatttgt tcttggtttc cttctaaaac ttgtctcaaa atgttttggc
     4381 ataaactttg aatacgtgcc ttgatatttt aatgcgctta gtgttgtttc tacaatagcg
     4441 ccaatgcgtc ttgataaata acgatagtaa gctgaagaat ttaataaatt aaactgaact
     4501 ttaggtaaaa tttcttccaa tgcttcattc gttaattgtc ttattttttt caggtctaat
     4561 tgtttaaaat cgccattaat acgttcagat atatatttta aaacagaatg gaaaatatca
     4621 cctaaatcaa agttttgaag ttcatacttc gttcgctcat ttagtttcag accatgtgac
     4681 gcatagtgtt taaatgggca ttgttgataa ccttcaaaac gggatacact ggcattgatt
     4741 tccttaccat ataaatcttt agacaacgtt tcacctaatt ttacagtttc attgtcaaac
     4801 gttaatgctg acattaaata atctaaacct tgatttaaat gatcgctatc tctaattact
     4861 tgataagcat ctaaccaact atcagccaca atttcatcat ataaccaagc acgcaatgct
     4921 tcaaataatg taattttggt ttgcttagca tgttgcatta gtgacaatgg gttaacttca
     4981 tggtattgag gaatgttagt aatttccaat tggttgaaca atgattgaat ttgatttaaa
     5041 aatgggctga tctccttatc atcaccactt gatcccatta gactgtaaga aaatgtaaca
     5101 tctcccttag ctctagtcat agcaacataa caaacaaatg cttcatccat ctgtaaaata
     5161 tctgatgttg gacttaactc gacattagcc tgctgttcaa agtatttctt ttcttcatct
     5221 gtaatcaagc ttgacgcagt tactggttgt ggcatcgttc catcattcat acctactaag
     5281 taaacatgtt gcttattatc gactttagcc aaatccatcg taccaatact tacttggtcc
     5341 aatgtttgcg gaatcataac aaattctaat tgttctaaac caatatcaaa tacttctaag
     5401 aaacgttcca tcgacattgg ttcatctcca aatactagaa ctaagtcatc aaggatttga
     5461 attaagccat tccatatttg atcaatttcc tccgcctttt catgattacc atttaaatca
     5521 agttcatctc gctctgtcat caattgattt ggcagttcga aatattccat actttcataa
     5581 aaagcagttg caaaatcttt tacagtttcc gcttgtgaca tttgcttttc aaaatgtaaa
     5641 attttatcaa tgacatcttt ctttaactta acgacttgtt caaatgtgtt acgttcatct
     5701 tcggtcagtt tatgcgcttt acgccccatt ttgctaaaat gttcgacatt aaatagctca
     5761 tcatctaacc aacgtttacc gtatatacca cgttcaagta caaaattttc aagtaaatca
     5821 actaagtatg cactttttag atatgatgcc gttaacacat cagtcttcaa taagcgtagc
     5881 attggattca cttgccaatt agattgaata acttcaatca atgaacgaat catttccatg
     5941 accggatgat gtgtcatcga acgctttgta tcaatattat aaggaatatt ataaagcggt
     6001 aatatggaat caaataaata agcataagat tcatcacgat ataaaatagc aatatcttga
     6061 tatcgtaatt gcttatcacg aatatcaacg atgatacgtc gcgcaatttc atttatttcc
     6121 tctctcatag tcgcagattc taaaatattg atatgacctt gacatgccac tcgattgatt
     6181 tgaagtgcat caaattcttg ttcaagatgc tttaaatctt gattattgaa gcgatataat
     6241 tggttgaaat attgacgttc aatagaaata ttgagttcat ttgctatttc ttcaatatgt
     6301 cgtaacactt ccgatggttt tctaaataaa ctaaattgat cgtggttacc atctgtcgtc
     6361 aatataattg tgacactctt cgcatattta attaatcctt tgattattaa atactcaatc
     6421 gttgaaaagt tgtgaaaacc atcaatatat atatcagcac gttttagcca ctctgatttc
     6481 ggcatacaat caataaaata ttgtaatgaa tcctcacccg taataaactc gttttgaatg
     6541 cgttgttcga actcacggta tattaaagca atatcctcta acttattttt agttcgagtt
     6601 tgcatatttt tatcagcaat aaagtgttct aaatgttcag gcgttactgc atatttttta
     6661 aaatcttgaa tttgttctgt taatttttca ctaaacccat aatattttgc ttgtgattga
     6721 taaagtttta aatacttttg ttgttcttga acaatgttat aaatcatcat ttccgttgca
     6781 gctttagata acttttgttc gctataacta ccaacttctt ggaaaatacg atgacttaat
     6841 cgttcaaaat gcaacacttc tgttcttaaa ctaccattta attccggatc attgacaaag
     6901 gcttgttcta attgaaatgt actttgagtt ggcgcaatta aaatgattgg atctccaagc
     6961 ggatctgctt tcattttttg ttttatttcg gtcaacattt tcgtagactt acctgttccc
     7021 gctctaccta aataagcatg taatgtcatg acaaaccctc acttcctttg acacatattt
     7081 taacacaaag tgattgtgat tgatttatta taagttcatt tcgaacttag cttttattgt
     7141 ggtactaaca aaataaaaca tcgtttatca gtattaaaac cgacaaacga tgttgtattt
     7201 gtttcatatt aatttttagt attttcagga ttgaaattat gtttaaattc actaaatggc
     7261 cagaacctaa atgaaacttt accaacaatt tggtcttcat caatgaggcc aaacgcacgg
     7321 ctatctttac ttacttcacg attatctcca agcactaaat atttaccttt tggaacgaca
     7381 tttgatttag gattcgcatt cggtaaatct ttaacttgga aagtcccagt aatgtaatca
     7441 ccttgtttat gttttaaatt gtagtttaaa tatggttcat cttgtttttt accattgaca
     7501 tataatgtat catttttgta ttctacttta tcaccaggaa caccgatgac acgtttaaca
     7561 tagtcatcat ttttgtttgc atggaagaca actacattac ctttttccaa accacctgtt
     7621 ttatatccaa caatgtttac agctactcgc tcgccatctt tcaaagttgg atccattgat
     7681 tcacctttaa ttgtatatgg cgtaacaata aatttaccta ctataaataa aatgacaaaa
     7741 gcgactgcaa ttgaaataat ccattccaat atttcttttt tcaattttga cacctctttt
     7801 taagatttga actgaacagt ccattttgaa aaaggatagt atcgtaaact aacattacca
     7861 ataatatcct ttttatcgat taaaccaaat tgtcttgaat cgtgcttgtt attatcttga
     7921 tcatttagca caacaaaatt gtttggcgga ataatatcac catctaattc tttaaaattg
     7981 cgcaaactaa aatctttaat ttttctgttc ttggcataag atgcgtcaac cggtcggtca
     8041 tcacggtata attgtccctg acgaaacgcc attgattgac caggtttggc aataattcga
     8101 ctagtatata tctcgttacc acgcctatat gtaatgatat caccattatt caattgatta
     8161 aatgtaactt taattttatt tacaataaca cgatcccctt tgttaagggt tggtgacata
     8221 tcattattcg gaatgacatg accaactatt acaaaagttt gtacgaacag tacaatgata
     8281 atagcaagta tcaatgaaat caaatatttt acaacttttt tcacgatgtc actccttttt
     8341 cgatcccata aaatgctgtt ctaacttttt tccaacaatc caaaatacaa ccaacacaac
     8401 taacattaat atccctctta aaggatgcgt taaaattgta gtaatttcct tacctaaata
     8461 acctaaaata attgttgaaa ctaactttga tgatgccaaa acaatgaaat aatatttagg
     8521 tctaatatga gatagactcg ctacaaaatt tattaatgta tttggcgtaa aaggaaaaca
     8581 aagtaaaata aacaatggga ttaatccttg gcgatcaata aaactaatca agcgttgaac
     8641 agcagtacgt tgtttaattc gctgcatcct ctcagtgttc accaatcgtt tacagatcaa
     8701 atagactgta aatgttccag aaattaatcc aagccaacta atcaatatac ctaaaatagg
     8761 tccataagct tgaatgttaa ttaaaatata gagtgctaaa ggaaatactg gaattatagc
     8821 tctaatatat aacaatataa atccaggtaa ataaccaaac tgtcgaaata tctcaaacca
     8881 ttcttctact tgatgaaacg acaaatcatc aatccctttc tttggttgaa gataattatt
     8941 cttacattat aaagttaatt actaagtaaa gaaacattaa catgtaatca tgctaataaa
     9001 tcagtctcta gtagtataac aatattattg taaggcagat attattttat ctttaatttt
     9061 ctcttaacat cttgtcacat tagctagtaa cctagttctt gcatataaat aaaaacgagg
     9121 ttgtcattac atttttacat ttgtaatgac aacctcgaaa atatgcttta aatagttaac
     9181 gtctagttct atcttttcaa acttcactaa tctttgaagt aatgtatttt ataaacgttc
     9241 ttctaattct tttttcaagt cttcaaaacc aggtttacct aataatgcga acatgttttg
     9301 tttatatgct tctacaccag gttggttaaa tggatttacg cctaattggt atccactcat
     9361 tgcacaagca agttcgaaga agtatacgac gtaaccgaaa gtttcttcat ctaattgtgg
     9421 aatgttcact accatgttag gaacaccacc atcagtatgc gctaataatg taccttcgaa
     9481 tgcttttgtg ttaacttcgt cgattgtttt accagctaaa taatttaatc cgtctagatc
     9541 atcactatct ttttcaatag taatatcata tttaggatga tttactttta caactgtttc
     9601 gaataagaag cgacggcctt cttgtacata ttgacctaaa gaatgtaaat cagttgtgta
     9661 gttggcactt gaaggataga tacctttgaa gtctttacct tctgattcac caaataattg
     9721 tttccaccat tcattaaagt attgcataga tggttcatag ttaatcaaca tttctgttgt
     9781 ataacctttt gcatataaaa tgtttcgaat tgtcgcatat tggtatgcaa tgttttcttc
     9841 taatttatct gaagataatt cttcacgtgc ttttgcagca ccaatcatca tagcttcgat
     9901 gttaattcca gctgttgcaa ttggtaataa tcctactgct gttaaaacag aatatcttcc
     9961 acctacatca tcaggtacga taaacgtttc ataaccttcg tttgtagcca actgttttaa
    10021 agcacctttt tctttatccg ttgttgcaaa tatacgtttt tgtgcttctt ctttaccgta
    10081 tctttcttca actaattgtt tgaacaatct aaatgcaact gctggttctg tagttgtacc
    10141 agatttagaa ataacgttta cagagaaatc tttgtctgct aaataatcaa ctaactcttt
    10201 cgtatatgtt gatgataagt gattaccaac aaatacaatt tcagggtatt cattgctgtt
    10261 tctaaatgat gacgttaaca tttcgattgc tgcacgtgca cctaagtaag aaccaccaat
    10321 accgatgact actaaaacat cagaattttc tttaatgcgt tttgatgctt caacaattct
    10381 tgaaaattct tctttgtcgt aatcaactgg taaatcaacc cagcctaaga agtcactacc
    10441 tgcaccagta ccttcatgaa ttgttttgtg aattgattta acaatttctt gttgttgttt
    10501 taattcgtgt tcaccgaaaa attctaacgt tttactaaaa tctaattgaa tatgagtcat
    10561 ctataaaagc ctcctgtttc atttaatatc ttaattttac taagtttacg tttgcgattc
    10621 aattcacaag tttgtactta atcaataaaa ttgatattta tgtgacgttt cacacctatt
    10681 tttcaacaaa catttcaaac tggcgtcaaa cactcaaaca ttttttatac aatttgcatg
    10741 ttttttaaaa tacttttaaa cattgataaa taagcattta cacttacaac tctaactatc
    10801 tctatcgcat tttatgaata aatatgtaaa ataatggttt tattttcatt aaaagtttgc
    10861 tatcatgtgt tcatacgaaa tattcagata actacaatga ggtgaatttt atgaaagaga
    10921 aaattgtttt agcatattca ggaggactag atacaagtgt ggccgttcaa tggcttatcg
    10981 acaaaggata cgacgttgta gcttgttgcc tagatgttgg tgaaggtaaa gatttagaca
    11041 tcgtttataa aaaagcttta gatatgggag cagttgaatg tcatattatt gatgcaacaa
    11101 aagaatttag tgatgagtat gtaagttatg caatcaaagg aaatttaatg tatgaaaatg
    11161 catatccatt agtttcagct ttatcaagac cattaatcgc taaaaaatta gtagagattg
    11221 ctgagaaaac aaattcagta ggtattgcac atggttgtac tggtaaaggg aatgaccaag
    11281 tacgtttcga agttgccatt aaagcattaa acccatcatt gaaagcattc gcacctgtac
    11341 gtgagtgggc atggagtcgt gaagaagaaa tcgattatgc aattaaacat aatatccctg
    11401 tatcaatcaa ccatgattca ccttattcta tcgatcaaaa tctatggggc agagcgaatg
    11461 aatgtggtat tttagaagat ccttatgctg cgccaccaga ggatgcgttc gatctaacaa
    11521 atgctttaga agaaacacca gatactgctg atgaaatcat tttaacgttt gataaaggca
    11581 tcccagttca aattgatggc aaaacatatg aattagacga tttaatttta acgttgaatg
    11641 cattagctgg taagcatggt atcggaagaa ttgaccatgt agaaaataga cttgtaggta
    11701 tcaaatcaag agaaatttat gaggcacctg ctgcagaagt tattttaaaa gcgcataaag
    11761 cattagaaac gattacgtta acgaaagatg tcgcacactt taaaccaatc attgagaagc
    11821 aatttgctga acaactatac aatggacttt ggttctcacc tttaactgat agcttgaaat
    11881 tatttattga tagtactcag caatacgtaa gtggtgatgt cagaattaaa ttattcaaag
    11941 gtaatgccat cgtgaatggt agaaaatcac cttacacatt atatgatgaa aaattagcaa
    12001 cttatacaaa agaagatgca tttaatcaag acgctgctgt tggctttatc gatatctatg
    12061 gtttacctac tcaagtaaat gcgatgttgc atggaggcta tagcaatgag caataaagct
    12121 tggggcggta gatttgaagt acaacctgaa gagtgggttg acgactttaa cgcatccatt
    12181 acttttgatc aaacgctcat agatcaagat atcgaaggca gcattgcaca tgcaactatg
    12241 cttgcgaatc aaggcattat tagtcaacaa gacagcgaac aaattataca aggactaaaa
    12301 tctattcaac atgattatca tcaagatcaa attcaattta gtgcatcatt agaagatatt
    12361 catttaaata ttgaacatga attaattaaa cgtatcggtg atgctggtgg taagttgcat
    12421 actggacgca gtagaaacga tcaagttgca acagacatgc acttgtacac taagaaacaa
    12481 gtgcaagata tcatcgcatt aattaagtcg ttacaaagtg taattgtaga catcgcttcc
    12541 aataatgttg atacaattat gcctggttat actcatttac agcgtgcaca gccaatttca
    12601 tttgcacatc atattatgac ttatttttgg atgttacaac gagaccaaca acgatttgaa
    12661 gatagtttaa aacgaatcga tattaatcct ttaggtgcag cagccttaag tggtaccaca
    12721 taccctatcg atagacacga gacaacagca ttgttgaact ttggcagtct ctatgagaat
    12781 agcctagatg ctgttagtga cagagactat attattgaaa cattgcataa tatttcttta
    12841 acgatggttc acttatcacg ctttgcagag gaaattattt tctggtccac agacgaagct
    12901 aaattcatta cattatcaga tgcattttca actggctcat ctattatgcc acaaaagaaa
    12961 aatcctgata tggcagaatt aattagaggt aaagttggtc gaacgactgg tcatttaatg
    13021 agcatgctta tgactttaaa aggattacct ctagcatata acaaagatat gcaggaagat
    13081 aaagaaggtt tattcgatgc tgtccataca attaaaggtt ctttacgtat tttcgaaggt
    13141 atgattcaaa cgatgacaat taataaagaa cgactcaatc aaactgttaa agaagatttt
    13201 tcaaatgcaa cggaactagc agattattta gtaactaaaa atattccatt tagaactgca
    13261 catgaaattg taggaaaaat cgtcttagaa tgtatacaac aaggtcatta tttattagat
    13321 gttcctttag caacatatca acaacatcat tctagtattg atgccgatat ttacgattat
    13381 ttgcagcctg aaaattgttt aaaacgacgt caaagttacg gttcaacagg tcaatcatcg
    13441 gtcaaacaac aacttgatgt tgctaaacaa ttactatcac aataaatacg ttaatctacc
    13501 tacccacaat gtctattaaa attacattgt gggtatttta atgctctctt cgtcttgttg
    13561 aacatcacat ttttaagatt cctaaaatgt ttgataattc ttttaaattt atattacaaa
    13621 aatgttataa attgtaaaag aaatgtgtaa agcgttttca caagcaggtt tttgtagtat
    13681 tttaaaattg ttagactaca aataaagaga tgaaaggata aagactatga ctaactcttc
    13741 gaaaagcttc actaaattta tggctgcttc tgctgttttt actatgggat ttttatcagt
    13801 acctactgct ggcgctgaac aaacaaatca aattgcaaat aaacctcagg ctattcaatg
    13861 gcatacaaat ttaacgaatg agcgattcac tactatcgca catcgtggcg caagtggcta
    13921 tgcacccgag catacgtttc aagcatatga taagagtcat aatgagttaa aagcatctta
    13981 tatcgaaatt gatttacaac gtaccaaaga tggccattta gttgctatgc atgatgaaac
    14041 tgttaaccgt acaacaaatg gacacggtaa agttgaggat tatacccttg atgaattaaa
    14101 acagttagat gcaggaagtt ggtttaataa aaaatatcca aaatacgcaa gagcaagtta
    14161 taaaaatgct aaagtaccca ctttagatga aattttagaa cgttatggcc cgaatgcaaa
    14221 ctattatatt gaaacaaagt catctgatgt atacccagga atggaagaac aattattagc
    14281 ttcattgaaa aagcatcacc ttttaaataa caataaatta aaaaatggac atgtaatgat
    14341 tcaatcattt tctgacgaaa gtttaaagaa aattcatcgt caaaataagc atgtgccatt
    14401 agtaaaatta gttgataaag gtgaactaca acaatttaac gaccaacgct taaaagagat
    14461 acgctcttat gcgattggat taggtcctga ttatacagat ttaactgaac aaaataccca
    14521 tcatttaaaa gacttaggat ttatagtaca tccttataca gtgaatgaaa aagctgatat
    14581 gttacgatta aataaatatg gcgttgatgg tgtctttaca aatttcgctg ataaatataa
    14641 agaagtcatt aagtagtaat gttaaactag aaaacataaa tacaaaaata tagctattac
    14701 tataaaaaac agcagtaaga tatttccaaa ttgaaattat cctactgctg tctttttggg
    14761 agtgggacag aaatgatatt ttcgcaaaat ttatttcgtc gtcccacccc aacttgcaca
    14821 ctattgtaag ctgactttcc gccagcctct gtgttggggc cccgccaact tgcacactat
    14881 tgtaagctga ctttccacca gcctctgtgt tggggccccg actatttttg aaaagagcgt
    14941 gttacacggg cattgtttta cagtcaacta ctgctaaaat aaaattaacg agcttagggc
    15001 tttgttttct gtcccaagct cgttaaatca catatgataa ttaattatgc ccaaccacga
    15061 tatctagctg cttctgctgt acgtttaata cctatgatat atgctgcaag tctcatatct
    15121 atttttcggt tttgagacaa ttcgtaaatc gtatcaaatg ccgcttctaa tttttcacgt
    15181 agcttttcat taacttcttc ttcagaccaa taataacctt gattattttg tacccattcg
    15241 aagtaagaaa ccgttacacc accagcactt gctaatacgt ctggaactaa taatatacca
    15301 cgttcagtta aaatacgtgt tgcttctggt gttgtaggtc cattagcagc ttcaacaacg
    15361 atactagctt taatatcatg tgcattgtct tctgtaattt ggtttgaaat agccgctggt
    15421 actaaaatgt cacaatctaa ttcaaacaat tctttatttg agattgtttc ttcaaataaa
    15481 tttgttaccg taccaaaact atcacgacgg tctaataaat aatctatatc taagccattt
    15541 ggatcgtgta atgcaccgta agcatcagag atacctacaa tttttgcacc taaatcatat
    15601 aagaatttag ctaagaaact tccggcatta ccgaaacctt gaataacaac cttggcacct
    15661 tcaatttgca tattacgacg ttttgcagct tgttcaattg caataactac acctagtgca
    15721 gttgatctgt cgcgtccatg agaaccaccc aatacaattg gtttacctgt gatgaaacct
    15781 ggtgaattaa atttatctaa tgcactatat tcatccatca tccaagccat aatttgtgag
    15841 tttgtaaata catctggtgc tggaatatct ttgttcggac ctacgaattg tgaaattgct
    15901 cttacatatc cgcgtgataa acgttcaact tcatgaatgc tcatttgacg tggatcacaa
    15961 acgataccac ccttaccacc accgtatggt aagtttacaa tgccacattt caaagtcatc
    16021 cacattgata atgcttttac ttcttcttca tcaacatctg ggtggaaacg cacgccccct
    16081 tttgttggtc caacagcatc attatgttgc gcacggtaac ctgtgaatgt ttttactgtg
    16141 ccatcatcca ttcgtacagg gatacgcact tgtaacattc ttaaaggttc tttaattaaa
    16201 tcgtacattc cttcgtcaaa tcccaattta tgcaatgctt ctttaataat tccttgagta
    16261 gaagttacta aattattgtt ctcagtcatg atccttttcg cctcttcttt acctaatgat
    16321 ttcgctttca aacatattgt aacataacgt attccttttt aaagccctta caaactgatt
    16381 gttacaactt tttgacatta ttgaaataca tgtcttattt tttcaagtgc aaggtccaat
    16441 tcttctttag taataattaa tggtggtgca aaacgaatga cagtatcatg cgtttcttta
    16501 cataataagc cttcttcttt caaagcttca caatatggtc tagcactttc attaagttcc
    16561 acacctataa acaaaccacg tccacggact tctttaattg atggatgatc aatttgcttt
    16621 aattgttctt taaaataatc tcctaattct aaagagcggc ctggtaaatc ctcatcaacg
    16681 ataacatcta atgcagcaat tgatgcagca caagcaagtg gattaccacc aaatgttgaa
    16741 ccatgtgagc caggtgtaaa gacatctaat acttctttat ctgctaatac aacagaaatt
    16801 gggaagactc caccacctag tgctttacct aaaatataga catcaggttt tacattatcc
    16861 caatccgtag caaataattt acccgaacga cctaatcctg cttggatttc gtcagcaata
    16921 aataagacat tatgttcatc acataattct ctaattgctt tcaaatatcc ttctggcggt
    16981 atatttatac ccgcttcacc ttgaattggt tctactaaaa ctgctgcagt attttcatta
    17041 attgcagctt tcaatgcatc tacatctcca aaatcaactt ttctaaatcc atctaataac
    17101 ggaccataac cacgttggta ttctgcttct gaagataatg aaactggcgc cattgttcga
    17161 ccatggaagt taccattaaa tgcaatgatt tctgctttat ttggctcaat tcctttaaca
    17221 tcgtatgccc agcgtcgtgc tgctttcaaa gctgtttcta ctgcttcagc acctgtattc
    17281 attggtaaag ctttatcttt acctgccagt ttacaaattt tttcgtacca ttcacctaag
    17341 ttatcactat gaaaagcacg tgaaactaaa gtcactttat cagcttgatc ttttaatgct
    17401 tgaataattt tcggatgtct atgaccttgg ttaacagcgg aatatgcaga taacatatcc
    17461 atatatttat tgccttcagg atctttaacc catacccctt cagcttctga aatgacaatt
    17521 ggcaatggta aataattatg tgctccgtaa tgatttgtta actcaataat tttttcagat
    17581 ttagtcatca tatctcccct tttcatcatt tataactatt atacatgaaa cattatccaa
    17641 ataattacat tagttttcaa agcagatact tttccaccaa aaaagatgaa ataatcacta
    17701 agtttcatta aatttgtcta ttttgaaaac ccttacattt ataatgacat aattacttaa
    17761 atgattacaa gcaaaagaat tgataatttt acacttaatc aaaagtatat tttactaaga
    17821 atatttttat ttataaatat tgaaaaccac taacaaattg catacacaat atcattagtg
    17881 gtaacagtta aacacttatt tatctttacg tggtaatgga taaaaccctt cattaaattg
    17941 atgccataaa ttaggagtta agtgatgatt atcttctctc tctggatcaa agtaattaat
    18001 aatttcatct tcccgtccat ctttaatttt ttcaacaaat tgataatcca gtagtagctc
    18061 tctaccaatg gctactaagt caacaccaac attttcaact gcatctaaag cttcgtcagc
    18121 tgtgaaaatt gaaccaatac cgataagtgg catacgacca tttatccatt tgtgaattaa
    18181 aggcagtctt tcttgtccag cgtatttacc ttcacgtgtc gttgcatgcg tatccatcat
    18241 tgaaacatga atatagtcga ttggcatatg gctaatttta ttaacgagtt cctctgtaat
    18301 ttccattgtg attcctggag actccgcttc ctctggagat aatctgtatc caactataaa
    18361 gtctttattg ccatacgctt ctttcgcttt aagtacttct tcaatcacag cgaccgggaa
    18421 tttatattga tttgcccata catcatttct tctattatag tatggtgata caaattgatg
    18481 aattaagtaa tgattcgcgc catgtatttc aacaccatca aaccctgctt caattgcacg
    18541 tcgcgttgct tcaccaaaat ccttgattgc ttgttcaatc tcttcattcg tcatttctct
    18601 agcactatgt tcttgtttct gaccaaaact ttttaaagaa attggacttg gtgctacgac
    18661 gtctccatca ggtgttaatt caggcaatgc ttgtgcaccg ccatgatgta tttgtacgag
    18721 tgctttggca ccgtttttct tcattgctgt agctaatcgt tttagtcctt caatattact
    18781 gtcatgcgcg attgatggct gtcctggaaa tgcttttccg acatcactca cattactcgc
    18841 agcattaatt gtaataccaa catcttgtga acgcttttca atataaggaa gttctacatc
    18901 tgaaatagta ccatcatcat ttgaagaaat atgtgttaaa ggggctaaca caaatcgatt
    18961 tctcaactct actccatttg gtaattctac tttatcaaac aatggttcgt atttactttt
    19021 cattacttaa ttcctcctta aaattattga gttgactata acatgtaatt tttttattct
    19081 ccaattatct gtttatatag ttgcaattcg tttaatactt taagttgtag ttctcatttc
    19141 taaaataaat aaaaaaaaca aatccacata caatattgca aatcaacgat tctatctaac
    19201 aaagataatg gatatgtcac cttaaaccat ttgtacgtgt aaatagaatc aatcatatta
    19261 cgttatcgta gacaaaaaga gattagtatc taataaaatt taatagatac taatctcttt
    19321 tatagtctaa gaaactttca tttcagaccc tttgtatgat tttcggtacg atttatctgt
    19381 tcctttagtc gtttcgaatt gctcgctttg actgttttat ccagattggt aagcgttctt
    19441 taagtgtttg aaacccatat ttttctgttt ctctgatttc atctaatact gattgttttt
    19501 ccttcttacg ctcataattt ttgaagtaat cattatcctt taatgataga ttaagctttc
    19561 cttcatcatc tatagacaaa attttagctt taacaatttg gccttctgat agaaatttct
    19621 tcaaattatg aacgtagtca tccataattt ctgatatatg aatcagtcct tcagtatgat
    19681 taggggtctc aacaaacgca ccgtatggtt gaataccagt tacacgcacc ttgatatgtt
    19741 ggccaatttt gtagttattc aacttaataa ccccttattt cgtttactta acactattat
    19801 catagcacaa atcgaaatgg tggactaatt aaaacatcaa atcatacgaa tattatttta
    19861 taaatgaata agaattctac aaacttggat ttacaaataa aattagcaac aaattcctat
    19921 ctaaatcaat atgatatcca gctactttgt tttcaattta tttactattt gaatagcaat
    19981 tctctgtaaa aacataaaaa gcaacctcaa ctattatc
//
LOCUS       DALPQQ010000037        19859 bp    DNA     linear   BCT 22-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus strain K18-6-464
            SAMD00233528-rid16434743.denovo.037, whole genome shotgun sequence.
ACCESSION   DALPQQ010000037 DALPQQ010000000
VERSION     DALPQQ010000037.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMD00233528
            Sequence Read Archive: DRR236061
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 19859)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 19859)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001543423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001543423.1
            Genome Coverage       :: 77x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/22/2022 17:09:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,811
            CDSs (total)                      :: 2,743
            Genes (coding)                    :: 2,689
            CDSs (with protein)               :: 2,689
            Genes (RNA)                       :: 68
            rRNAs                             :: 2, 4, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 4, 2 (16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 54
            CDSs (without protein)            :: 54
            Pseudo Genes (ambiguous residues) :: 0 of 54
            Pseudo Genes (frameshifted)       :: 27 of 54
            Pseudo Genes (incomplete)         :: 27 of 54
            Pseudo Genes (internal stop)      :: 10 of 54
            Pseudo Genes (multiple problems)  :: 10 of 54
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..19859
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMD00233528-rid16434743.denovo.037"
                     /strain="K18-6-464"
                     /db_xref="taxon:1280"
                     /geo_loc_name="Japan: Niigata"
     gene            complement(76..2484)
                     /gene="priA"
                     /locus_tag="O7798_001131"
     CDS             complement(76..2484)
                     /gene="priA"
                     /locus_tag="O7798_001131"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499718.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="primosomal protein N'"
                     /protein_id="HDC2863398.1"
                     /translation="MIAKVIVDVASKSVDYKFDYIIPEQLESVIQPGVRVIVPFGPRT
                     IQGYVMEVTAEPDAQLDVSKLKKIIEVKDIQPELTSELIALSEWMGSTHVIKRISMLE
                     VMLPSAIKAKYKKAFKMKDDIELPSALLQKFDKHGYYYYKDAQKNNDIQLLMKLLKDD
                     IVEEKTILTQNITKKTKRAVRVIEGYHPDEVLAKLEKVIKQYDLYAYLSEEQHKTIFL
                     TDIEDMGFSKSSLDGLIKKGYVEKYDAVVERDPFKDRVFEQESKQQLTEDQYKAYEAI
                     KAKIVSQEQETFLLHGVTGSGKTEVYLQTIEDVLSQGKQAMMLVPEIALTPQMVLRFK
                     RRFGDDVAVLHSGLSNGERYDEWQKIRDGRARVSVGARSSVFAPFKNLGLIIIDEEHE
                     STYKQEDYPRYHAREIAQWRSEYHHCPVILGSATPCLESYARAEKGVYHLLSLPNRVN
                     QQALPEIDIVDMREELSEGNRSMFSKDLREAIQLRLDRQEQVVLFLNRRGYASFMLCR
                     DCGYVPQCPNCDISLTYHKTTDLLKCHYCGYQETPPNQCPNCESEHIRQVGTGTQKVE
                     ELLQQEFEDARIIRMDVDTTSKKGAHEKLLTEFEKGNGDILLGTQMIAKGLDYPNITL
                     VGVLNADTMLNLPDFRASERTYQLLTQVAGRAGRHEKAGQVIIQTYNPDHYSILDVQK
                     NDYLTFYRQEMEYRKLGKYPPYYYLINFTISHKEMKKVMVASQHVHKILLQHLTEKAL
                     VLGPSPAALARINNEFRFQILVKYKSEPGLLQAIQFLDDYYHEKFIKEKLALKIDIDP
                     QMMM"
     gene            complement(2484..3683)
                     /gene="coaBC"
                     /locus_tag="O7798_001132"
     CDS             complement(2484..3683)
                     /gene="coaBC"
                     /locus_tag="O7798_001132"
                     /EC_number="4.1.1.36"
                     /EC_number="6.3.2.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499717.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional phosphopantothenoylcysteine
                     decarboxylase/phosphopantothenate--cysteine ligase CoaBC"
                     /protein_id="HDC2863399.1"
                     /translation="MKKILLAVTGGIAAYKAIDLTSKLTQSGYEVRVMLTNHAQKFVT
                     PLAFQAISRNAVYTDTFIEENPSEIQHIALGDWADAIIVAPATANTIAKLSVGIADDL
                     VTSTLLATETPKFIAPAMNVHMYENKRTQQNINILKEDGYHFIEPGSGFLACGYVAKG
                     RMEEPLQIVSVIDAHFQNSNRLANSSFQDKRALVTAGPTIEVIDPVRFVSNRSSGKMG
                     YAIAEALRNRGAIVTLVAGPTTLEDPKDIEVIHVQSAEEMFEQVTSRFDEQDIVVKAA
                     AVSDYTPVDVLEHKMKKQDGDLSVSFKRTKDILKYLGEHKTSQYLIGFAAETEDIENY
                     AQQKLRKKNADVIISNNVGDMSIGFSSDDNELTMHFKNNEKVNIKKGKKVVLAAQILD
                     ELETRWQ"
     gene            complement(3899..4117)
                     /locus_tag="O7798_001133"
     CDS             complement(3899..4117)
                     /locus_tag="O7798_001133"
                     /EC_number="2.7.7.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499716.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-directed RNA polymerase subunit omega"
                     /protein_id="HDC2863400.1"
                     /translation="MLNPPLNQLTSQIKSKYLIATTAAKRAREIDEQPETELLSEYHS
                     FKPVGRALEEIADGKIRPVISSDYYGKE"
     gene            complement(4117..4740)
                     /gene="gmk"
                     /locus_tag="O7798_001134"
     CDS             complement(4117..4740)
                     /gene="gmk"
                     /locus_tag="O7798_001134"
                     /EC_number="2.7.4.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499715.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="guanylate kinase"
                     /protein_id="HDC2863401.1"
                     /translation="MDNEKGLLIVLSGPSGVGKGTVRKRIFEDPSTSYKYSISMTTRQ
                     MREGEVDGVDYFFKTRDAFEALIKDDQFIEYAEYVGNYYGTPVQYVKDTMDEGHDVFL
                     EIEVEGAKQVRKKFPDALFIFLAPPSLEHLRERLVGRGTESDEKIQSRINEARKEVEM
                     MNLYDYVVVNDEVELAKNRIQCIVEAEHLKRERVEAKYRKMILEAKK"
     gene            5015..6712
                     /locus_tag="O7798_001135"
     CDS             5015..6712
                     /locus_tag="O7798_001135"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499714.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NFACT family protein"
                     /protein_id="HDC2863402.1"
                     /translation="MAYDGLFTKKMVESLQFLTTGRVHKINQPDNDTILMVVRQNRQN
                     HQLLLSIHPNFSRLQLTTKKYDNPFNPPMFARVFRKHLEGGIIESIKQIGNDRRIEID
                     IKSKDEIGDTIYRTVILEIMGKHSNLILVDENRKIIEGFKHLTPNTNHYRTVMPGFNY
                     EAPPTQHKINPYDITGAEVLKYIDFNAGNIAKQLLNQFEGFSPLITNEIVSRRQFMTS
                     STLPEAFDEVMAETKLPPTPIFHKNHETGKEDFYFIKLNQFNDDTVTYDSLNDLLDRF
                     YDARGERERVKQRANDLVRFVQQQLHKYQNKLAKLIEEYEQSKNKDTEQLYGELITAN
                     IYRIKQGDKEVTALNYYTNEEVVIPLNPTKSPSANAQYYYKQYNRMKTRERELQHQIQ
                     LTKDNIDYFSTIEQQLHHISVHDIDEIRDELAEQGFMKQRKNQTKKKKAQIQLQHYVS
                     TDGDDIYVGKNNKQNDYLTNKKAKKTHTWLHTKDIPGSHVVIFNDAPSDTTIKEAAML
                     AGYFSKAGNSGQIPVDYTLIKNVHKPSGAKPGFVTYDNQKTLYATPDYELIQKMKQS"
     gene            complement(6975..7376)
                     /locus_tag="O7798_001136"
     CDS             complement(6975..7376)
                     /locus_tag="O7798_001136"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499713.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HDC2863403.1"
                     /translation="MDIPKITTFLMFNNQAEEAVKLYTSLFEDSEIITMAKYGENGPG
                     DPGTVQHSIFTLNGQVFMAIDANSGTELPMNPAISLFVTVKDTIEMERLFNGLKDEGA
                     ILMPKTNMPPYREFAWVQDKFGVSFQLALPE"
     gene            complement(7813..8025)
                     /locus_tag="O7798_001137"
     CDS             complement(7813..8025)
                     /locus_tag="O7798_001137"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499712.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDC2863404.1"
                     /translation="MNDKTSNDLYGKIKHCNEFINHSNDSNLSSSHDVDESSTKQKHI
                     KNKTTIDHNDDLFKHVKDILRKQGQI"
     gene            complement(8055..8666)
                     /locus_tag="O7798_001138"
     CDS             complement(8055..8666)
                     /locus_tag="O7798_001138"
                     /EC_number="2.4.2.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499711.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="orotate phosphoribosyltransferase"
                     /protein_id="HDC2863405.1"
                     /translation="MAKEIAKSLLDIEAVTLSPNDLYTWSSGIKSPIYCDNRVTLGYP
                     LVRGAIRDGLINLIKEHFPEVEVISGTATAGIPHAAFIAEKLKLPMNYVRSSNKSHGK
                     QNQIEGAKSEGKKVVVIEDLISTGGSSVTAVEALKLAGAEVLGVVAIFTYGLKKADDT
                     FSNIQLPFYTLSDYNELIEVAENEGKISSEDIQTLVEWRDNLA"
     gene            complement(8666..9358)
                     /gene="pyrF"
                     /locus_tag="O7798_001139"
     CDS             complement(8666..9358)
                     /gene="pyrF"
                     /locus_tag="O7798_001139"
                     /EC_number="4.1.1.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499710.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="orotidine-5'-phosphate decarboxylase"
                     /protein_id="HDC2863406.1"
                     /translation="MKDLPIIALDFESKEKVNQFLDLFDESLFVKVGMELFYQEGPQL
                     INEIKERGHDVFLDLKLHDIPNTVGKAMEGLAKLNVDLVNVHAAGGVKMMSEAIKGLR
                     KHNQDTKIIAVTQLTSTTEDMLRHEQNIQTSIEEAVLNYAKLANAAGLDGVVCSPLES
                     RMLTEKLGTSFLKVTPGIRPKGASQNDQHRITTPEEARQLGSTHIVVGRPITQSDNPV
                     ESYHKIKESWLV"
     gene            complement(9468..12641)
                     /gene="carB"
                     /locus_tag="O7798_001140"
     CDS             complement(9468..12641)
                     /gene="carB"
                     /locus_tag="O7798_001140"
                     /EC_number="6.3.5.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499709.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbamoyl-phosphate synthase large subunit"
                     /protein_id="HDC2863407.1"
                     /translation="MPKRNDIKTILVIGSGPIIIGQAAEFDYAGTQACLALKEEGYRV
                     ILVNSNPATIMTDKEIADKVYIEPLTHDFIARIIRKEQPDALLPTLGGQTGLNMAIQL
                     HESGVLQDNNVQLLGTELTSIQQAEDREMFRTLMNDLNVPVPESDIVNTVEQAFKFKE
                     QVGYPLIVRPAFTMGGTGGGICHNDEELHEIVSNGLHYSPATQCLLEKSIAGFKEIEY
                     EVMRDKNDNAIVVCNMENIDPVGIHTGDSIVVAPSQTLSDVEYQMLRDVSLKVIRALG
                     IEGGCNVQLALDPHSFDYYIIEVNPRVSRSSALASKATGYPIAKLAAKIAVGLTLDEM
                     LNPITGTSYAAFEPTLDYVISKIPRFPFDKFEKGERELGTQMKATGEVMAIGRTYEES
                     LLKAIRSLEYGVHHLGLPNGESFDLDYIKERISHQDDERLFFIGEAIRRGTTLEEIHN
                     MTQIDYFFLHKFQNIIDIEHQLKEHQGDLEYLKYAKDYGFSDKTIAHRFNMTEEEVYQ
                     LRMENDIKPVYKMVDTCAAEFESSTPYYYGTYETENESIVTDKEKILVLGSGPIRIGQ
                     GVEFDYATVHAVWAIQKAGYEAIIVNNNPETVSTDFSISDKLYFEPLTEEDVMNIINL
                     EKPKGVVVQFGGQTAINLADKLAKHGVKILGTSLENLNRAEDRKEFEALLRKINVPQP
                     QGKTATSPEEALANAAEIGYPVVVRPSYVLGGRAMEIVDNDKELENYMTQAVKASPEH
                     PVLVDRYLTGKEIEVDAICDGETVIIPGIMEHIERAGVHSGDSIAVYPPQTLTEDELA
                     TLEDYTIKLAKGLNIIGLINIQFVIAHDGVYVLEVNPRSSRTVPFLSKITDIPMAQLA
                     MRAIIGEKLTDMGYQEGVQPYAEGVFVKAPVFSFNKLKNVDITLGPEMKSTGEVMGKD
                     TTLEKALFKGLTGSGVEVKDHGTVLMTVSDKDKEEVVKLAQRLNEVGYKILATSGTAN
                     KLAEYDIPAEVVGKIGGENDLLTRIQNGDVQIVINTMTKGKEVERDGFQIRRTTVENG
                     IPCLTSLDTANALTNVIESMTFTMRQM"
     gene            complement(12634..13734)
                     /gene="carA"
                     /locus_tag="O7798_001141"
     CDS             complement(12634..13734)
                     /gene="carA"
                     /locus_tag="O7798_001141"
                     /EC_number="6.3.5.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499708.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamine-hydrolyzing carbamoyl-phosphate
                     synthase small subunit"
                     /protein_id="HDC2863408.1"
                     /translation="MQSKRYLVLEDGSFYEGYRLGSDNLTVGEIVFNTAMTGYQETIS
                     DPSYTGQIITFTYPLIGNYGINRDDFESLVPTLNGIVVKEASAHPSNFRQQKTLHDVL
                     ELHQIPGIAGVDTRSITRKIRQHGVLKAGFTDRKEDIDQLVKHLQQVELPKNEVEIVS
                     TKTPYVSTGKDLSVVLVDFGKKQNIVRELNVRGCNVTVVPYTTTAEEILAMAPDGVML
                     SNGPGNPEVVECAIPMIQGILGKIPFFGICLGHQLFALSQGASSFKMKFGHRGANHPV
                     KNLETGKVDITSQNHGYAIDIDSLKSTDLEVTHLALNDGTVEGLKHKTLPAFSVQYHP
                     EANPGPSDSNYLFDDFVAMMTNFKEKERHINA"
     gene            complement(13736..15010)
                     /locus_tag="O7798_001142"
     CDS             complement(13736..15010)
                     /locus_tag="O7798_001142"
                     /EC_number="3.5.2.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499707.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydroorotase"
                     /protein_id="HDC2863409.1"
                     /translation="MKLIKNGKVLQNGELQQADILIDGKVIKQIAPAIEPSNGVDIID
                     AKGHFVSPGFVDVHVHLREPGGEYKETIETGTKAAARGGFTTVCPMPNTRPVPDSVEH
                     FEALQKLIDDNAQVRVLPYASITTRQLGKELVDFPALVKEGAFAFTDDGVGVQTASMM
                     YEGMIEAAKVNKAIVAHCEDNSLIYGGAMHEGKRSKELGIPGIPNICESVQIARDVLL
                     AEAAGCHYHVCHVSTKESVRVIRDAKRAGIHVTAEVTPHHLLLTEDDIPGNNAIYKMN
                     PPLRSTEDREALLEGLLDGTIDCIATDHAPHARDEKAQPMEKAPFGIVGSETAFPLLY
                     THFVKNGDWTLQQLVDYLTIKPCETFNLEYGTLKENGYADLTIIDLDSEQEIKGEDFL
                     SKADNTPFIGYKVYGNPILTMVEGEVKFEGDK"
     gene            complement(15028..15909)
                     /locus_tag="O7798_001143"
     CDS             complement(15028..15909)
                     /locus_tag="O7798_001143"
                     /EC_number="2.1.3.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499706.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate carbamoyltransferase catalytic
                     subunit"
                     /protein_id="HDC2863410.1"
                     /translation="MNHLLSMEHLSTDQIYKLIQKASQFKSGERQLPNFEGKYVANLF
                     FENSTRTKCSFEMAELKLGLKTISFETSTSSVSKGESLYDTCKTLESIGCDLLVIRHP
                     FNNYYEKLANINIPIANAGDGSGQHPTQSLLDLMTIYEEYGYFEGLNVLICGDIKNSR
                     VARSNYHSLKALGANVMFNSPNAWIDDSLEAPYVNIDDVIETVDIVMLLRIQHERHGL
                     AEETRFAADDYHQKHGLNEVRYNKLQEHAIVMHPAPVNRGVEIQSDLVEASKSRIFKQ
                     MENGVYLRMAVIDELLK"
     gene            complement(15937..17244)
                     /locus_tag="O7798_001144"
     CDS             complement(15937..17244)
                     /locus_tag="O7798_001144"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499705.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="uracil permease"
                     /protein_id="HDC2863411.1"
                     /translation="MQNDEMFERTVKPVLDVNEKPQPAQWAFLSLQHLFAMFGATVLV
                     PFLTGLPISAALLASGIGTLLYILITKAQIPAYLGSSFAFITPIITGLSTHSLGDMLV
                     ALFMSGVMYVIIGILIKLSGTAWLMKLLPPVVVGPVIMVIGLSLAPTAVNMAMYENPG
                     DMKGYNISFLIVAMITLLVTIVVQGFFKGFLSLIPVLVGIIVGYVVAIFMGIVKFDAI
                     MSAKWIDFPHIYLPFKDYVPSFHLGLVLVMIPIVFVTVSEHIGHQMVLNKIVGRNFFE
                     KPGLDKSIIGDGVSTMFASIIGGPPSTTYGENIGVLAITRIYSIYVIGGAAVIAIVLA
                     FIGKFTALISSIPTPVMGGVSILLFGIIAASGLRMLVESKVDFANNRNLVIASVILVV
                     GIGNLVFNLKEIGINLQIEGMALAALSGIILNLILPKEKKQNN"
     gene            complement(17462..17989)
                     /gene="pyrR"
                     /locus_tag="O7798_001145"
     CDS             complement(17462..17989)
                     /gene="pyrR"
                     /locus_tag="O7798_001145"
                     /EC_number="2.4.2.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499704.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional pyr operon transcriptional
                     regulator/uracil phosphoribosyltransferase PyrR"
                     /protein_id="HDC2863412.1"
                     /translation="MSERIIMDDAAIQRTVTRIAHEILEYNKGTDNLILLGIKTRGEY
                     LANRIQDKIHQIEQQRIPTGTIDITYFRDDIEHMSSLTTKDAIDIDTDITDKVVIIID
                     DVLYTGRTVRASLDAILLNARPIKIGLAALVDRGHRELPIRADFVGKNIPTSKEETVS
                     VYLEEMDQRNAVIIK"
     gene            complement(18389..19306)
                     /locus_tag="O7798_001146"
     CDS             complement(18389..19306)
                     /locus_tag="O7798_001146"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499703.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RluA family pseudouridine synthase"
                     /protein_id="HDC2863413.1"
                     /translation="METYEFNITDKEQTGMRVDKLLPELNNDWSRNQIQDWIKAGLVV
                     ANDKVVKSNYKVKLNDHIVVTEKEVVEADILPENLNLDIYYEDDDVAVVYKPKGMVVH
                     PSPGHYTNTLVNGLMYQIKNLSGINGEIRPGIVHRIDMDTSGLLMVAKNDIAHRGLVE
                     QLMDKSVKRKYIALVHGNIPHDYGTIDAPIGRNKNDRQSMAVVDDGKEAVTHFNVLEH
                     FKDYTLVECQLETGRTHQIRVHMKYIGFPLVGDPKYGPKKTLDIGGQALHAGLIGFEH
                     PVTGEYIERHAELPQDFEDLLDTIRKRDA"
     gene            complement(19306..19797)
                     /gene="lspA"
                     /locus_tag="O7798_001147"
     CDS             complement(19306..19797)
                     /gene="lspA"
                     /locus_tag="O7798_001147"
                     /EC_number="3.4.23.36"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499702.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="signal peptidase II"
                     /protein_id="HDC2863414.1"
                     /translation="MHKKYFIGTSILIAVFVVIFDQVTKYIIATTMKIGDSFEVIPHF
                     LNITSHRNNGAAWGILSGKMTFFFIITIIILIALVYFFIKDAQYNLFMQVAISLLFAG
                     ALGNFIDRILTGEVVDFIDTNIFGYDFPIFNIADSSLTIGVILIIIALLKDTSNKKEK
                     EVK"
BASE COUNT         6175 a         3765 c         2896 g         7023 t
ORIGIN      
        1 tgtacttaaa gtaaatattc aaacactggt tcaaatactc gtacatactg aacttgtttc
       61 taataattag taatgttaca tcatcatctg tggatcaata tcaatcttca atgctaattt
      121 ttcttttata aatttttcat ggtaatagtc atctaaaaac tgaatggctt gtaataatcc
      181 aggttcactt ttatatttca ctaaaatttg gaatctaaat tcattgttga ttctcgcaag
      241 tgctgccgga gatggaccta gtacaagcgc tttttctgtt aaatgctgta ataaaatttt
      301 atgaacatgc tgcgatgcta ccataacctt cttcatttct ttatgtgaga ttgtgaaatt
      361 aatcaaataa taatacggtg gatactttcc taatttacga tattccattt cctgacgata
      421 aaatgttaaa taatcatttt tttgaacatc caatattgaa taatgatctg gattatacgt
      481 ttgaatgatg acttgacctg ccttttcatg acgaccagct ctaccagcca cttgcgttaa
      541 tagttgataa gtacgttcgc tcgcccgaaa atcaggtaaa tttaacattg tatctgcatt
      601 cagcacacca actaaagtaa tatttggata atctaatcct ttcgcaatca tctgagtacc
      661 tagtaaaatg tcaccgttac ctttttcgaa ttcagtcaat aacttttcat gtgcaccttt
      721 ctttgaggtt gtatctacat ccatcctaat tatgcgcgca tcttcaaatt cttgttgcaa
      781 tagttcttca actttctgag taccagtacc tacttgtcga atgtgttcac tctcacaatt
      841 tggacattga ttcggtggcg tctcttggta accacaatag tgacatttta ataagtctgt
      901 cgttttatga tacgttaatg aaatatcaca gtttggacat tgcggtacat atccacaatc
      961 ccgacataac ataaacgatg cataaccacg tcgatttaaa aataaaacaa cttgttcctg
     1021 tcgatctaat cttaattgta tggcttcacg taaatctttt gaaaacattg accgattacc
     1081 ttcactcaat tcttcacgca tgtctactat atcaatttca ggtaaagctt gttggttcac
     1141 tctgtttggt aatgatagca aatgataaac gcctttttca gctcgtgcat aactttcaag
     1201 acatggtgtt gcacttccta aaatgactgg acagtgatga tattcacttc gccattgggc
     1261 aatttctcta gcgtgatatc tcggataatc ttcttgttta tatgtagatt catgttcttc
     1321 atcaatgatg attaacccta aatttttgaa aggtgcgaac acacttgacc ttgcaccaac
     1381 acttactctc gcacgaccat ccctaatttt ttgccattca tcataacgtt ccccattaga
     1441 taagccagaa tgtaatacag caacgtcatc accaaatcga cgtttgaagc gtaaaaccat
     1501 ttgcggtgtt agagcgattt caggaactaa catcatcgcc tgttttcctt ggcttaaaac
     1561 atcttctatc gtttgtaaat atacttctgt tttacctgat cccgtcacac catgaagtaa
     1621 aaatgtttct tgctcttggc ttacaatttt agctttaatc gcttcatatg ctttatattg
     1681 gtcttctgtt aattgctgtt ttgattcttg ttcgaaaaca cgatctttaa atgggtctct
     1741 ttcaacaacc gcgtcatatt tttcaacata accttttttg ataagtccat ctaaactgga
     1801 ttttgaaaag cccatatcct caatatcagt taaaaatatt gttttatgtt gttcttcaga
     1861 caagtaagca tacaaatcgt attgtttaat aactttctcc aacttagcta atacttcatc
     1921 aggatgatac ccttcaatga cacgaacagc acgcttggtt tttttagtta tattttgtgt
     1981 gagaatcgtt ttttcttcaa cgatatcatc ttttaacaac ttcataagca attgaatatc
     2041 attatttttt tgcgcatctt tataataata gtaaccatgc ttatcaaatt tttgtaataa
     2101 agctgaaggt agctctatgt catctttcat cttaaatgct tttttatact tcgctttaat
     2161 agcactcgga agcatcactt ctagcataga aatacgttta atgacatgag ttgaacccat
     2221 ccactcactt aaagctatta attctgatgt taattctggt tgtatatctt tcacttctat
     2281 gatttttttt aacttcgaaa cgtcaagttg tgcatcaggt tctgctgtta cttccattac
     2341 ataaccttga atcgttcttg gtccaaaagg tacaattaca cgcacaccag gttggatgac
     2401 agattcgagt tgttcgggaa ttatataatc aaatttatag tcaacgctct tcgacgcgac
     2461 atcgactatg actttcgcta tcattattgc cacctagttt ctagttcatc taaaatttgt
     2521 gcagctaata ctactttttt tcctttcttg atatttactt tttcattatt tttaaaatgc
     2581 attgtcaatt cattatcatc agaactaaat ccgatagaca tatccccaac attatttgaa
     2641 ataatcacat ctgcattttt cttgcgtaat ttttgttgtg cataattttc aatatcttca
     2701 gtctctgctg caaagcctat taaatactgt gatgttttat gttcacctaa atatttaaga
     2761 atgtctttag tacgtttaaa agatactgac aaatcaccat cctgcttttt catcttatgt
     2821 tctaatacat caaccggtgt atagtcagat acggctgctg cttttacaac aatatcttgt
     2881 tcgtcaaatc ggcttgtcac ttgttcaaac atttcttcag cactttgaac atgaataact
     2941 tcaatatctt ttggatcctc tagtgttgta ggaccagcaa ctaacgtcac gatagctcct
     3001 cgatttcgca atgcttcagc tattgcatag cccatttttc cagaagaacg attggataca
     3061 aatctgactg gatcgataac ttcaatagtt ggtcctgctg taaccaatgc gcgtttatct
     3121 tgaaatgaac tattagctaa acgattacta ttttgaaaat gagcatcaat tacagaaacg
     3181 atttgaagcg gttcttccat acgtccttta gcaacataac cacatgctag aaatccgctt
     3241 cctggttcga taaaatgata cccatcttct tttaaaatat taatattttg ctgcgtacgt
     3301 ttattttcat acatatgcac attcatagca ggcgcaataa atttcggtgt ctctgttgct
     3361 agcaacgttg atgtcaccaa atcatcagca atacctacac tcaattttgc aattgtattt
     3421 gccgttgcag gtgcaacaat gattgcatct gcccaatcac ctaatgcaat atgctgtatt
     3481 tctgaaggat tttcttctat aaaagtatct gtataaacag catttcgact tattgcttga
     3541 aatgctaatg gtgtcacaaa tttttgtgcg tgattcgtta acataacgcg aacttcatac
     3601 ccagattgtg ttaacttact tgtcaaatca attgctttat atgccgcaat gccacctgta
     3661 acggctaata atattttctt catattcaat ctcccttaaa tatcactatg acatttacgc
     3721 tttacatcat catatgcgca caaatgctca ttactttttt atagatacaa atttagtatt
     3781 attataacat caatcattgg ataaactaaa aaaacacacc tacataggtg cgtttgattt
     3841 ggatatgcct tgacgtattt gatgtacgtc tagcttcaca tatttttaat ggtcgaaact
     3901 attctttacc ataataatca cttgaaataa cagggcgaat tttaccgtca gcaatttctt
     3961 ctaacgctct accaactggt ttaaatgaat gatattcact taataattca gtttcaggtt
     4021 gttcatcaat ttcacgcgct cttttcgctg cagttgttgc aattaaatac tttgatttaa
     4081 tttgtgacgt taattggttt aaaggtggat ttaacattat tttttagcct ccaaaatcat
     4141 ttttctatac ttagcttcta cgcgctctct ttttaagtgc tcagcttcta caatacattg
     4201 aattctattc ttcgcaagtt ctacttcatc attaactaca acgtaatcgt ataaattcat
     4261 catttcaact tctttacgcg cttcgttaat acgactttgt attttctcat cagattctgt
     4321 tcctctacct actaatcgct ctctcaagtg ttctaaactt ggaggtgcta agaaaataaa
     4381 tagcgcatct ggaaatttct ttctaacttg ctttgcacct tctacttcaa tttctaaaaa
     4441 tacatcatga ccttcgtcca ttgtatcttt aacatattga actggtgtac cataatagtt
     4501 gcctacatat tcagcatatt ctataaattg gtcatctttg attaaagctt caaacgcatc
     4561 cctagtttta aaaaagtaat ctacgccatc aacttcacct tcacgcattt gacgtgttgt
     4621 cattgaaata gaatacttat atgatgtact tggatcttca aatattcgtt ttctaacagt
     4681 acctttacct actccagatg gtcctgataa aacgattaac aatccttttt cattatccat
     4741 gccttacgac ctctctaagc taatcttcta ttatttaaat atgatatcac attgttcttt
     4801 atattgtata gcatatttga aattgcatgc cataatttct attaagtcta acaatatcgt
     4861 tatattgcac gattaatttt aattaaataa attgaattgc aaacttttag ataatgtaaa
     4921 atgtatggca taatgtatgg ttcaataact atactgaaaa gttacaatca tgttaaaatg
     4981 aaacgaatga tatgaagaag gtggaagata aattatggct tatgatggct tatttacaaa
     5041 gaaaatggtt gagtctctac aatttttaac aacaggacgc gttcacaaaa tcaatcaacc
     5101 tgataatgac acgatactaa tggttgtacg tcaaaataga caaaaccatc aattgttatt
     5161 gtcaatccat ccaaactttt caagattaca attgactact aaaaaatatg ataatccatt
     5221 taatccaccc atgtttgcgc gtgtttttag aaaacactta gaaggtggta ttatcgaatc
     5281 gattaagcaa attggtaatg atcgtcgcat tgaaatcgat ataaagagta aagatgaaat
     5341 tggcgatact atttaccgca ctgtcatcct tgagattatg ggtaaacata gtaacttaat
     5401 tttagtagat gaaaatcgca aaataattga aggatttaaa cacttaacac caaatacgaa
     5461 tcactatcgt acagtaatgc caggatttaa ttatgaagca ccacctactc agcacaaaat
     5521 aaatccgtat gatattacag gtgcagaggt gttgaaatat atcgatttta acgcaggtaa
     5581 tattgctaaa caattattga atcagtttga aggatttagc cctttaatta cgaatgaaat
     5641 cgttagtcgt cgtcaattta tgacttcatc aacattacca gaagcatttg acgaagtaat
     5701 ggcagaaacc aagttaccac ctactcctat ttttcataaa aatcatgaaa caggtaaaga
     5761 ggatttctat tttataaagt taaatcaatt taatgatgat acagttacat acgattcatt
     5821 aaatgatttg cttgatcgtt tttatgatgc gcgtggcgaa cgtgaacgcg ttaaacaacg
     5881 tgcgaatgat ttagttcgat ttgttcaaca gcagttgcac aaatatcaaa ataaattagc
     5941 gaagttgatt gaagaatatg agcagtctaa aaataaagat actgaacagt tatatggtga
     6001 attgatcact gctaatatat atcgaattaa gcaaggcgat aaagaagtga cggcattgaa
     6061 ttattatacg aatgaagaag ttgtcattcc tttaaatcct acaaaatccc catcagcaaa
     6121 tgctcaatat tattataaac aatataatcg tatgaaaacg agagaacgtg aattacaaca
     6181 tcaaattcaa ttgacgaaag acaatataga ttatttttca acaatcgaac aacaattaca
     6241 tcatatttct gtccatgaca ttgatgaaat tagagatgaa ttagcagaac aaggctttat
     6301 gaaacagcgt aaaaatcaaa ctaagaaaaa gaaagcgcag attcaattac aacattatgt
     6361 atcaactgat ggcgacgata tatatgttgg taagaataac aagcaaaatg attatttaac
     6421 aaataaaaaa gctaaaaaaa ctcacacatg gttacacaca aaagatattc ctggttcaca
     6481 tgtcgttata tttaatgatg caccaagtga tacgacaatc aaggaagcgg ctatgttagc
     6541 aggatacttt tcaaaagctg gtaattctgg acaaatacct gttgattata cattaattaa
     6601 aaatgtgcat aaaccatcag gtgcaaagcc tgggtttgta acatatgaca atcaaaaaac
     6661 tttgtatgct acacctgatt atgaacttat tcaaaaaatg aaacaatcat aatcaagttg
     6721 tcgacaaata aacacctcac aaaagaaagt agtcctttct tatggtgagg tgtttattta
     6781 ttatttaatg cgttcattga aacgaagtat cgtgttttta aataacgtat catcatttaa
     6841 gttacaaatt atctttgtga ttttaaaaat gagtgaaact aaaatgctaa tgtgtactta
     6901 aaatagaaat acataggtaa aacgcatgca taagaaaaag tgtttcttta tcattcaacg
     6961 ctgtgcgaat ccttttactc aggtaatgct aattgaaaac ttactccaaa cttatcttga
     7021 acccaagcaa actctctgta tggtggcata ttcgtttttg gcattaaaat ggcaccttca
     7081 tcttttaatc cattaaatag tcgttccatt tcaatagtat cttttactgt aacaaataat
     7141 gaaatcgcag gattcattgg taattctgtg ccactattag catcaatcgc catgaatact
     7201 tgtccattta atgtaaatat tgagtgttgt acagtcccgg gatcaccagg tccattttca
     7261 ccatacttag ccattgttat aatctcacta tcttcaaata agcttgtgta tagtttaaca
     7321 gcttcttcag cttggttatt aaacattaaa aatgtcgtga tttttggaat atccatgcta
     7381 tgcctcctat agattgaact tctataacta ctattatctt aacataatta aaatgacaaa
     7441 agcgcgtcgt accgttatgt gcacgaatga caaacgtctt attggcctgt tgattaaatc
     7501 acatagttaa cgataaaaat tacgcaagat taaaaatatg atacatatgt taataaatga
     7561 tacttatcat aggtattaat gttttgactt attgtcaaat ttgattacaa ttaaaattaa
     7621 gttaaaggag ggacgttatg ttacattatg tgattccagt attagtccta ttactcgtat
     7681 tcttaattgg ttggatttta ataaagttaa ttatccgcta ataaattttt tatataataa
     7741 aagctatagt gtttgtaata ttcggatgcg gttaagcagc ccctgatatt aaacactata
     7801 gcttttttgt ttttaaattt gtccttgttt acgtaatata tcctttacat gtttaaataa
     7861 atcatcatta tgatctatag ttgttttatt ttttatatgt ttttgcttcg ttgaactttc
     7921 gtcgacatcg tgactactag atagattgga atcatttgaa tgattgataa attcgttaca
     7981 atgttttatc ttcccatata aatcattaga tgttttgtca ttcatttgtt gaattcctcc
     8041 ttctagtgtc tatattatgc taagttgtct ctccattcaa ctaatgtttg gatatcttca
     8101 ctagaaattt taccttcatt ttcagctact tcaattaatt cattgtaatc acttaaagtg
     8161 taaaaaggta gttgaatatt gctaaatgta tcatctgctt ttttcaaacc gtaagtaaag
     8221 atagctacaa cacctaatac ttctgcacct gctagtttta aggcttcaac tgctgtgact
     8281 gaagatcccc ctgtcgaaat taaatcttct atcacaacta cttttttacc ttcactttta
     8341 gcaccttcga tttgattttg cttaccatga ctcttatttg atgaacgaac ataattcatt
     8401 ggtaatttta atttttcagc aataaaagct gcatgtggaa taccagctgt tgcagtacca
     8461 gaaataactt ctacttcagg aaagtgttct ttaattaagt taattaaacc atcgcggatt
     8521 gcgcctcgaa ctaaaggata acctaacgta acacggttat cacagtaaat cggtgattta
     8581 atacctgaac tccatgtata taaatcattt ggtgataatg ttacagcttc aatatctaat
     8641 aatgattttg caatttcttt agccattata ctaaccaact ttctttaatt ttatgataac
     8701 tttcgactgg attgtcactt tgtgtaatcg gtctaccgac tacaatatgc gtcgaaccaa
     8761 gctgtcttgc ttcttccggt gtcgtaatac ggtgttggtc attttgagat gcacctttag
     8821 gtctaatacc tggtgttact tttaaaaatg atgtacctaa cttttcagtc aacatacgac
     8881 tttcaagagg tgaacaaaca acgccatcta aaccagctgc atttgctaac ttggcataat
     8941 ttaaaacggc ctcttcaatc gatgtttgta tattttgttc gtgtcgtaac atgtcttctg
     9001 ttgttgacgt aagctgtgtt actgcaataa tttttgtatc ttgattatgt tttcttaatc
     9061 ctttaatggc ctcagacatc atttttacgc caccagcagc atgaacattt accagatcaa
     9121 cattcaattt agctagtcct tccatcgcct taccaactgt attaggaata tcatgcagtt
     9181 ttaaatctaa aaatacatca tggcctcttt cttttatctc attaattaat tgaggacctt
     9241 cttgataaaa aagttccata cctactttta cgaataatga ttcatcaaat aaatctaaaa
     9301 attgatttac tttttctttt gattcaaaat ctaatgcaat aattggtaaa tctttcatca
     9361 tatatgtctc cctttatatt aagaaattca ttaaaataat gaggctgtaa tataaacttc
     9421 tttaagtaaa tggttaatta cagccccacc gatacagttt gattgattta catttgacgc
     9481 attgtaaatg tcatactttc aattacattc gttaaggcat tagctgtatc taaagatgtc
     9541 aaacatggaa taccattttc aactgtagta cgtctaattt ggaagccatc cctttctact
     9601 tctttacctt tagtcattgt atttataacg atttgaacat caccattttg aatacgtgtt
     9661 aataaatcat tttcgccacc aattttgcct actacttctg caggtatgtc atactcagct
     9721 aatttattag ctgttccaga cgttgctaaa attttatagc caacttcatt taagcgttgt
     9781 gccaatttaa caacttcctc tttatctttg tcactgacgg tcattaatac tgtaccgtga
     9841 tctttaactt caacgccact acctgttaac cctttgaata acgccttttc taatgtagta
     9901 tctttcccca tcacttcacc tgttgacttc atttcaggtc ctaaagtaat atcaacattt
     9961 ttcaatttat taaaactaaa tactggtgct ttcacaaaga caccctcagc atatggttga
    10021 accccttctt gataacccat atctgttagt ttttccccaa tgattgctcg catagctaat
    10081 tgtgccattg gaatatcagt aattttactt aagaatggta ccgttctact agaacgtgga
    10141 tttacttcta aaacatacac accatcgtga gctataacga attgaatgtt gattaagcca
    10201 atgatgttta aacctttagc taattttata gtatagtcct caagtgttgc taactcgtct
    10261 tctgtcaaag tttgtggtgg atatacagcg attgagtcac cactatgcac accagcacgt
    10321 tcaatatgtt ccatgattcc tggaataatg accgtttctc catcacaaat cgcatcaact
    10381 tcaatttctt taccagttaa atatctatcg actagtaccg gatgttccgg actcgctttt
    10441 acagcctggg tcatatagtt ttctaactct ttgtcattgt ctacaatttc cattgcgcga
    10501 ccacctaata cataagaagg tcttactaca accggatatc cgatttctgc agcattcgct
    10561 aatgcttcct caggtgatgt agctgttttc ccttgtggct gtggcacgtt aatttttctt
    10621 aatagtgctt caaattcttt tctatcttca gcacgattta gattttctag tgaagtacca
    10681 agtattttaa caccatgttt agccaatttg tctgctaaat taatcgctgt ttgtcctcca
    10741 aattgtacaa cgacaccttt aggtttttct aaattaatga tattcatcac atcttcttca
    10801 gttaaaggtt caaagtataa tttgtcagaa attgagaagt ctgttgaaac tgtttctgga
    10861 ttgttattca caattatcgc ttcgtaccct gctttttgaa ttgcccaaac ggcgtgaact
    10921 gtcgcatagt caaattctac accttggccg attcgaattg gtccagagcc taatactaag
    10981 attttttctt tgtcagtaac tatggattca ttttcagttt cgtatgtacc ataataatat
    11041 ggtgttgaag attcaaattc agctgcgcaa gtatcaacca tcttgtaaac aggtttaata
    11101 tcattttcca tacgcaattg atatacttct tcttccgtca tattaaagcg atgcgctatt
    11161 gttttatcac taaatccata atcttttgca tatttaagat attctaaatc accttgatgc
    11221 tcttttaatt gatgctcaat atcaataatg ttttggaact tgtgtaagaa gaagtaatca
    11281 atctgagtca tattatgaat ttcttctaat gttgtgcctc ttctaattgc ttcgccgatg
    11341 aaaaataatc gttcatcatc ttggtgtgaa atacgttctt taatataatc aagatcgaag
    11401 ctttcaccat ttggtaatcc taagtgatgc acaccatact caagtgatcg aattgctttt
    11461 aacaatgatt cttcgtaagt tcgaccaatg gccataactt cacctgttgc tttcatttgt
    11521 gtgccaagct ctcgttctcc tttttcaaat ttatcaaaag gaaatcttgg tatttttgaa
    11581 atcacatagt ctaaagttgg ttcaaacgct gcataagatg ttcctgtaat tggatttaac
    11641 atttcatcta atgttagacc aaccgcgatt ttagcagcta attttgcaat aggatatcct
    11701 gttgcttttg aagctaacgc tgatgaacgt gatacacgcg gatttacttc tataatataa
    11761 taatcgaatg aatggggatc taatgctaat tgaacattac aaccaccttc gatacctaaa
    11821 gctcgaataa cttttaatga aacatcacgt aacatttgat actcaacatc tgataatgtt
    11881 tgactaggag ccacaacaat tgaatcgcct gtatgaatac caactggatc aatattttcc
    11941 atgttacata caacgatggc attatcgttt ttatcacgca ttacttcgta ttcgatttct
    12001 ttaaaacctg cgatagattt ttctaataaa cattgcgttg ctggactata atgaagacca
    12061 tttgagacga tttcatgtaa ttcttcatca ttatgacaaa taccgcctcc ggtaccaccc
    12121 atcgtaaatg ccggtctaac aattagcggg tatcccactt gctctttgaa tttaaaggct
    12181 tgctctactg tatttacaat gtcactctct ggtacaggaa cgtttaaatc attcattaat
    12241 gttctaaaca tttcacggtc ttctgcttgt tgaattgatg ttagctcagt tcctaataat
    12301 tggacgttat tatcttgaag cacaccactt tcgtgtagtt gaatcgccat gtttaaacct
    12361 gtttgaccac ctaaagttgg aagtaaagcg tcaggttgct ctttacgtat aattcgcgct
    12421 ataaaatcat gagttaacgg ttcgatatat actttatccg caatttcctt atcagtcatg
    12481 attgtcgctg gatttgaatt tacaagaata actcgatatc cctcttcttt taaagctaga
    12541 catgcttgtg ttccagcata atcaaattca gctgcttgac ctatgataat tggcccagac
    12601 cctattacta aaattgtttt gatatcatta cgtttaggca ttgatatgac gctccttttc
    12661 cttaaaatta gtcatcattg ctacaaaatc atcaaataga tagtttgaat ctgacggtcc
    12721 tggatttgct tcaggatggt attgaacaga aaatgctggt aatgttttat gttttaaacc
    12781 ttctacagta ccatcattta atgcaagatg agtaacttct aaatcagtac tttttaacga
    12841 atctatatct attgcatatc catggttttg actcgtaata tcaacttttc cagtctctaa
    12901 atttttaact ggatggttcg caccacgatg accaaacttc attttaaatg agcttgctcc
    12961 ttgagataat gcaaaaagtt gatgtcctag acagatacca aagaacggaa ttttccctaa
    13021 aattccttga atcattggaa tcgcacattc tacaacttca ggattacctg gtccgtttga
    13081 tagcataacg ccatctggag ccattgctaa aatttcttcg gcagtagttg tatatggtac
    13141 aactgtgacg ttacaacctc tgacgtttaa ttctcgaaca atattttgct tcttaccaaa
    13201 gtctacaagt acgacactta gatccttacc tgtcgaaaca tacggtgttt tagtcgaaac
    13261 gatttctact tcgtttttag gtaattctac ttgttgtaaa tgtttgacaa gttgatcaat
    13321 atcttctttt cgatcagtaa aaccagcttt taacacaccg tgttgtcgaa ttttacgcgt
    13381 aatacttctt gtatcaacac ctgcaatccc tggaatttga tgcaattcta aaacgtcatg
    13441 aagtgtcttt tgctgtctaa aattacttgg atgcgcactc gcttctttca ctacaatacc
    13501 gtttaatgta ggtactaatg attcaaaatc gtctctattg ataccataat taccgattaa
    13561 tggatacgta aaagtaatga tctgacctgt atatgatgga tctgaaatag tttcttgata
    13621 acctgtcatc gctgtattaa atacaatttc tcctacagtt aagttatcag atcctaaacg
    13681 gtagccttcg taaaaagaac cgtcttctaa cactagataa cgtttgcttt gcatattatt
    13741 tatccccctc aaatttaact tcgccttcaa ccattgttaa gatcggattt ccataaactt
    13801 tatagccgat aaatggtgta ttatctgctt ttgataagaa atcttctcct ttaatttctt
    13861 gttcactatc taaatcaatg attgttaaat ctgcataacc attttctttt aatgtgccgt
    13921 attctaaatt aaatgtctca catggtttaa ttgttaagta atctactaat tgttgtaatg
    13981 tccaatcacc attttttaca aaatgcgtat ataataatgg gaatgctgtt tcactaccaa
    14041 caattccgaa tggtgctttt tccattggtt gtgctttttc atcacgtgca tgtggtgcat
    14101 ggtctgttgc gatacagtca attgtaccgt ctagtaaccc ttctaacaaa gcctctctat
    14161 cttcagtact tctcaatggt ggattcattt tataaatggc attattacca ggaatatcat
    14221 cttctgttaa caataaatgg tgtggtgtaa cttcagctgt aacatgaatg cctgcgcgtt
    14281 tagcgtcacg aatgactcta acactttctt tagtagaaac atgacataca tgataatgac
    14341 aacctgctgc ttcagctaat agtacatctc ttgcgatttg aacagattca caaatgtttg
    14401 gaatacctgg tatacctaac tctttactgc gtttcccttc atgcattgca ccaccataga
    14461 ttaatgaatt atcttcacag tgtgctacga tggctttgtt tacttttgca gcttcaatca
    14521 tgccttcata catcatgctt gcagtttgta ctcctacacc gtcatctgta aacgcaaagg
    14581 caccttcttt tactagtgct gggaaatcaa ccaattcttt acctaattga cgtgttgtaa
    14641 ttgaagcata aggtaataca cgtacttgag cattgtcatc gattaatttt tgtaaagctt
    14701 caaaatgttc tacagaatct ggtaccggtc ttgtgttagg cattggacat acagttgtaa
    14761 atccgcctct agcagcagct ttagtaccag tttcaattgt ctctttatat tcaccaccag
    14821 gttcacgtaa atgaacatga acatcgacaa atccaggtga cacaaagtga cctttcgcat
    14881 ctatgatgtc aacaccattg cttggttcaa ttgcaggtgc aatttgttta attaccttac
    14941 catcaattaa aatatctgct tgttgtaatt cgccattttg taatacttta ccgtttttaa
    15001 ttaatttcat cattttcgtc cccttaccta ttttaataat tcatcaatga ctgccattct
    15061 taagtaaacg ccattttcca tttgcttaaa aattcttgat tttgaagctt ctactaaatc
    15121 gctttgtatt tctactcctc tattcacagg tgccggatgc ataacaatag catgttcttg
    15181 taatttgtta tagcgtactt catttaagcc atgcttttga tgataatcat ctgctgcaaa
    15241 tctagtttct tctgcaagcc catgcctttc atgttgaatt cttaataaca taactatatc
    15301 tactgtttct ataacatcat ctatatttac ataaggtgct tctaaagaat catcaatcca
    15361 agcatttggg ctattaaaca ttacgtttgc acctaatgct tttaaactat ggtaattact
    15421 acgtgcgaca cgtgaatttt taatgtctcc acaaatcaat acattcaagc cttcaaaata
    15481 tccatattct tcatatatcg tcattaaatc aagtaaactt tgtgttggat gttgtccact
    15541 accatcacca gcattcgcaa ttgggatgtt aatattcgct aatttttcat agtagttatt
    15601 aaacggatgt ctaatgacta ataaatcaca gccaatactt tctaaagttt tacatgtgtc
    15661 atataaagat tcaccttttg aaacagatga tgttgatgtt tcaaagctaa tcgtttttaa
    15721 ccctagctta agttctgcca tttcaaaact acattttgtt cgagtagaat tttcaaagaa
    15781 taaatttgcg acatatttcc cttcaaagtt tggtagttga cgttcaccag atttaaattg
    15841 acttgccttt tggataagtt tgtatatttg atctgtagat aaatgttcca ttgataataa
    15901 atgattcata aaagcgccct ccttaatttg taaatcttaa ttgttttgtt ttttctcttt
    15961 aggtaagatt aagttcaaaa taattcctga aagtgcagct aatgccatcc cctcaatttg
    16021 aaggttgata ccaatttctt ttaagttaaa tactaaatta ccgataccta caactaaaat
    16081 tacagaagct ataactaaat ttcgattgtt cgcaaaatct actttgcttt caactaacat
    16141 tcttaagcca cttgctgcaa taataccgaa aagtaatata gatactcctc ccataactgg
    16201 tgtaggtata gaagaaatta atgcagtgaa cttaccaatg aatgctaaaa caattgctat
    16261 aactgctgca ccaccaatga cgtaaatact gtatattctg gtaatcgcta atacaccgat
    16321 attttcaccg tatgttgtac ttggtggtcc accaataata ctggcaaaca ttgtagaaac
    16381 accatcacca atgattgatt tatcaagtcc tggcttttca aagaagtttc tacctacgat
    16441 tttattcaat accatttggt gcccaatatg ttcacttact gttacgaaca caatcggaat
    16501 cattacaagt acaagtccta agtgaaatga aggtacataa tctttaaatg gcagataaat
    16561 atgagggaaa tctatccatt ttgctgacat aattgcatca aatttcacaa tccccataaa
    16621 aatcgctacc acataaccta cgataatacc tacaagaact ggaattaaag ataggaatcc
    16681 tttaaaaaat ccttgaacga ctattgttac aagcaaggtt atcattgcaa caattaagaa
    16741 actgatattg taacctttca tatctccagg attttcatac attgccatat tgactgcagt
    16801 aggcgctaag cttaaaccaa ttaccatgat gactggtcca acaacaactg gtggtaataa
    16861 tttcattaac catgctgtcc cacttaattt gattagaatc ccgatgatga cgtacataac
    16921 accactcatg aataatgcta caagcatgtc tcctaagcta tgcgtactta atcccgtgat
    16981 aattggcgtg ataaatgcaa agctagatcc caagtatgct ggtatttgcg ccttcgttat
    17041 taagatataa agtaatgtac cgattcccga agctagtaac gctgctgata ttggtagtcc
    17101 tgttaagaat ggtactagta ctgttgcgcc aaacatcgca aataaatgtt gtaagcttaa
    17161 aaatgcccat tgcgctggtt gtggtttttc atttacatct agtacgggtt ttactgttcg
    17221 ttcaaacatt tcatcatttt gcataatatt catttcctcc gataataaaa aaatctcttt
    17281 acatcagtat atgtaaagag acaaaaagtg tgacaagttg ctacaagtca ttttcgtcca
    17341 tagaaattga cttatagttg tcgaacatga gggtattatt agataaacaa gcatatgaaa
    17401 acttatttat cattcaactc ccccaccttt ttcagtctct cgtactgaat taaaaggggt
    17461 attatttaat tataactgca tttctttgat ccatttcttc taaatagaca cttaccgttt
    17521 cctctttaga agtaggtata tttttaccaa caaaatctgc tcgaattggt aactcacgat
    17581 gtcctcgatc aaccaaagca gctaaaccaa ttttaatagg tctagcattt agcaaaatag
    17641 catcaagtga agcacgaacc gttcgaccag tatacagcac atcgtcaata atgatgacta
    17701 ctttatctgt aatatctgtg tcgatgtcta ttgcgtcttt tgtcgtaagt gatgacatgt
    17761 gctctatatc atctctaaag tatgtaatat caattgttcc agtaggtata cgttgttgct
    17821 caatttgatg aattttatct tgtatacgat tcgctaaata ttcacctctt gttttgatac
    17881 ctaaaagaat taaattatca gtacctttgt tatactccaa aatttcgtga gcgattctcg
    17941 tcactgtacg ttgtattgcg gcatcatcca ttatgatacg ttcagacata ttctcaccct
    18001 ttcaaaattt agaaacaaaa aacctcatgt ctttaatatc gacatgaggt ttagtatata
    18061 caatcagcct atttacatag aagaatcgta gtattactac ttattcttgc atatgtgaaa
    18121 gtgttatgat cattttagta tatatctata ttttcatgtc tttgacgtct ctctggacgc
    18181 tcaattaaag actctttatg ttgtacttaa actgttataa ggataatact aatcaggcgc
    18241 tttgtcaatc tatattgaaa aattaaccat actcagtaaa aatgttaacc ttaatctatt
    18301 ttataatgtg ttttcattta aaaaaaacga aaacgataaa cacttatagt ttacataata
    18361 atgttatcgt aattatagca cgacacaatt atgcatctct ttttcgaatt gtatctaata
    18421 aatcttcaaa gtcttgtggt aattcagcat gtctttcaat atattcacct gttactggat
    18481 gttcgaatcc aataagtcca gcatgtagag cttgaccacc aatatccaat gtctttttcg
    18541 gtccatactt tggatcacca actaatggga agccaatata tttcatgtga acacggattt
    18601 gatgcgtacg tcctgtttca agttgacatt caacaagcgt ataatcttta aaatgttcta
    18661 gtacgttaaa atgtgtcact gcttccttac catcatcaac aacagccata gattgacgat
    18721 catttttgtt tctaccaatt ggcgcatcga ttgtaccgta atcatgagga atattcccgt
    18781 gaactaaagc gatatatttt cttttaacag atttatccat taattgttct acaagcccac
    18841 gatgagcaat atcattttta gcaaccatta ataaaccaga agtatccata tctatacggt
    18901 gaacaatacc tggacgaatt tctccattaa tacctgacaa atttttaatt tgatacatta
    18961 aaccattaac taatgtattg gtataatgcc ctggtgatgg atgaactacc atgcctttcg
    19021 gtttatatac aactgcaaca tcgtcatctt cataataaat atctaaattt aaattttcag
    19081 gtagaatatc agcttcaacc acttcttttt cagtgacaac tatatgatca ttaagtttca
    19141 ctttataatt agatttaaca actttatcgt ttgcaacgac taaacctgct ttaatccaat
    19201 cttgtatctg gttacgagac caatcattat ttaattcagg cagcaactta tctacacgca
    19261 tacctgtttg ttctttatct gtaatgttaa attcataagt ctccattact taacctcctt
    19321 ctccttttta ttggaagtat cctttaataa ggcaataata attaatatta caccaattgt
    19381 taaacttgaa tctgcgatat taaatattgg aaaatcataa ccaaaaatat ttgtatcaat
    19441 aaagtcaaca acttctcctg ttaaaattct atcaataaag tttccaagtg cacctgcaaa
    19501 aagtaaacta atagcaactt gcataaacaa attatattga gcatctttaa taaagaaata
    19561 tactaaggct attaatataa taatggtaat aataaagaaa aatgtcattt ttccactcaa
    19621 tattccccat gcagcaccat tatttcgatg tgatgttatg tttaaaaagt gcggtatcac
    19681 ttcaaatgaa tctccaattt tcattgtagt agctataata tatttagtaa cttggtcaaa
    19741 tataacgaca aatactgcta ttaaaatgga agtgccaata aaatattttt tgtgcatttt
    19801 cgttcctcca atcaatcgtc catgagacaa ctctttatat tatagcttac acctgctaa
//
LOCUS       DALPQQ010000038        19851 bp    DNA     linear   BCT 22-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus strain K18-6-464
            SAMD00233528-rid16434743.denovo.038, whole genome shotgun sequence.
ACCESSION   DALPQQ010000038 DALPQQ010000000
VERSION     DALPQQ010000038.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMD00233528
            Sequence Read Archive: DRR236061
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 19851)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 19851)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001543423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001543423.1
            Genome Coverage       :: 77x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/22/2022 17:09:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,811
            CDSs (total)                      :: 2,743
            Genes (coding)                    :: 2,689
            CDSs (with protein)               :: 2,689
            Genes (RNA)                       :: 68
            rRNAs                             :: 2, 4, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 4, 2 (16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 54
            CDSs (without protein)            :: 54
            Pseudo Genes (ambiguous residues) :: 0 of 54
            Pseudo Genes (frameshifted)       :: 27 of 54
            Pseudo Genes (incomplete)         :: 27 of 54
            Pseudo Genes (internal stop)      :: 10 of 54
            Pseudo Genes (multiple problems)  :: 10 of 54
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..19851
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMD00233528-rid16434743.denovo.038"
                     /strain="K18-6-464"
                     /db_xref="taxon:1280"
                     /geo_loc_name="Japan: Niigata"
     gene            70..1365
                     /gene="purB"
                     /locus_tag="O7798_001148"
     CDS             70..1365
                     /gene="purB"
                     /locus_tag="O7798_001148"
                     /EC_number="4.3.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500617.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adenylosuccinate lyase"
                     /protein_id="HDC2863415.1"
                     /translation="MIERYSREEMSNIWTDQNRYEAWLEVEILACEAWSELGHIPKAD
                     VQKIRQNAKVNVERAQEIEQETRHDVVAFTRQVSETLGEERKWVHYGLTSTDVVDTAL
                     SFVIKQANDIIEKDLERFIDVLAEKAKNYKYTLMMGRTHGVHAEPTTFGVKMALWYTE
                     MQRNLQRFKQVREEIEVGKMSGAVGTFANIPPEIESYVCKHLGIGTAPVSTQTLQRDR
                     HAYYIATLALIATSLEKFAVEIRNLQKTETREVEEAFAKGQKGSSAMPHKRNPIGSEN
                     ITGISRVIRGYITTAYENVPLWHERDISHSSAERIMLPDVTIALDYALNRFTNIVDRL
                     TVFEDNMRNNIDKTFGLIFSQRVLLALINKGMVREEAYDKVQPKAMISWETKTPFREL
                     IEQDESITSVLTKEELDECFDPKHHLNQVDTIFERAGLA"
     gene            1474..1776
                     /locus_tag="O7798_001149"
     CDS             1474..1776
                     /locus_tag="O7798_001149"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500616.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDC2863416.1"
                     /translation="MQIEKLRGAALDELFDAILTLENREECYQFFDDLCTVNEIQSLS
                     QRLQVAKMIKQGYTYATIEQESGASTATISRVKRSLQWGNDAYTMILDRMNIETNE"
     gene            1948..2640
                     /locus_tag="O7798_001150"
     CDS             1948..2640
                     /locus_tag="O7798_001150"
                     /EC_number="2.5.1.n9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500615.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heptaprenylglyceryl phosphate synthase"
                     /protein_id="HDC2863417.1"
                     /translation="MYDIKKWRHIFKLDPAKHISDDDLDAICMSQTDAIMIGGTDDVT
                     EDNVIHLMSRVRRYPLPLVLEISNIESVMPGFDFYFVPTVLNSTDVVFHNGTLLEALK
                     TYGHSIDFEEVIFEGYVVCNADSKVAKHTKANTDLTTEDLEAYAQMVNHMYRLPVMYI
                     EYSGIYGDVSKVQAVSEHLTETQLFYGGGISSEQQATEMAAIADTIIVGDIIYKDIKK
                     ALKTVKIKESSK"
     gene            2637..4829
                     /gene="pcrA"
                     /locus_tag="O7798_001151"
     CDS             2637..4829
                     /gene="pcrA"
                     /locus_tag="O7798_001151"
                     /EC_number="3.6.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500614.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA helicase PcrA"
                     /protein_id="HDC2863418.1"
                     /translation="MNALLNHMNTEQSEAVKTTEGPLLIMAGAGSGKTRVLTHRIAYL
                     LDEKDVSPYNVLAITFTNKAAREMKERVQKLVGDQAEVIWMSTFHSMCVRILRRDADR
                     IGIERNFTIIDPTDQKSVIKDVLKNENIDSKKFEPRMFIGAISNLKNELKTPADAQKE
                     ATDYHSQMVATVYSGYQRQLSRNEALDFDDLIMTTINLFERVPEVLEYYQNKFQYIHV
                     DEYQDTNKAQYTLVKLLASKFKNLCVVGDSDQSIYGWRGADIQNILSFEKDYPEANTI
                     FLEQNYRSTKTILNAANEVIKNNSERKPKGLWTANTNGEKIHYYEAMTERDEAEFVIR
                     EIMKHQRNGKKYQDMAILYRTNAQSRVLEETFMKSNMPYTMVGGQKFYDRKEIKDLLS
                     YLRIIANSNDDISLQRIINVPKRGVGPSSVEKVQNYALQNNISMFDALGEADFIGLSK
                     KVTQECLNFYELIQSLIKEQEFLEIHEIVDEVLQKSGYREMLERENTLESRSRLENID
                     EFMSVPKDYEENTPLEEQSLINFLTDLSLVADIDEADTENGVTLMTMHSAKGLEFPIV
                     FIMGMEESLFPHIRAIKSEDDHEMQEERRICYVAITRAEEVLYITHATSRMLFGRPQS
                     NMPSRFLKEIPESLLENHSSGKRQTIQPKAKPFAKRGFSQRTTSTKKQVLSSDWNVGD
                     KVMHKAWGEGMVSNVNEKNGSIELDIIFKSQGPKRLLAQFAPIEKKED"
     gene            4833..6836
                     /gene="ligA"
                     /locus_tag="O7798_001152"
     CDS             4833..6836
                     /gene="ligA"
                     /locus_tag="O7798_001152"
                     /EC_number="6.5.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500613.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent DNA ligase LigA"
                     /protein_id="HDC2863419.1"
                     /translation="MADLSSRVNELHDLLNQYSYEYYVEDNPSVPDSEYDKLLHELIK
                     IEEEHPEYKTVDSPTVRVGGEAQASFNKVNHDTPMLSLGNAFNEDDLRKFDQRIREQI
                     GNVEYMCELKIDGLAVSLKYVDGYFVQGLTRGDGTTGEDITENLKTIHAIPLKMKEPL
                     NVEVRGEAYMPRRSFLRLNEEKEKNDEQLFANPRNAAAGSLRQLDSKLTAKRKLSVFI
                     YSVNDFTDFNARSQSEALDELDKLGFTTNKNRARVNNIDGVLEYIEKWTSQRESLPYD
                     IDGIVIKVNDLDQQDEMGFTQKSPRWAIAYKFPAEEVVTKLLDIELSIGRTGVVTPTA
                     ILEPVKVAGTTVSRASLHNEDLIHDRDIRIGDSVVVKKAGDIIPEVVRSIPERRPEDA
                     VTYHMPTHCPSCGHELVRIEGEVALRCINPKCQAQLVEGLIHFVSRQAMNIDGLGTKI
                     IQQLYQSELIKDVADIFYLTEEDLLPLDRMGQKKVDNLLAAIQQAKDNSLENLLFGLG
                     IRHLGVKASQVLAEKYETIDRLLTVTEAELVEIHDIGDKVAQSVVTYLENEDIRALIQ
                     KLKDKHVNMIYKGIKTSDIEGHPEFSGKTIVLTGKLHQMTRNEASKWLASQGAKVTSS
                     VTKNTDVVIAGEDAGSKLTKAQSLGIEIWTEQQFVDKQNELNS"
     gene            6849..8048
                     /locus_tag="O7798_001153"
     CDS             6849..8048
                     /locus_tag="O7798_001153"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500612.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CamS family sex pheromone protein"
                     /protein_id="HDC2863420.1"
                     /translation="MKRTLVLLITAIFILAACGNHKDDQAGKDNQKHNNSSNQVKEIA
                     TDKNVQGDNYRTLLPFKESQARGLLQDNMANSYNGGDFEDGLLNLSKEVFPTDKYLYQ
                     DGQFLDKKTINAYLNPKYTKREIDKMSEKDKKDKKANENLGLNPSHEGETDPEKIAEK
                     SPAYLSNILEQDFYGGGDTKGKNIKGMTIGLAMNSVYYYKKEKDGSTFSKKLDDSEVK
                     KQGKQMASEILSRLRENDDLKDIPIHFAIYKQSSEDSITPGEFITQATAEKSQTKLNE
                     WHNINEKSALLPSSTAADYDENLNNNFKQFNDNLQSYFSNFTQAVGKVKFVDKKPQRL
                     VVDLPIDYYGQAETIGITQYVTEQANKYFDKIDNYEIRIKDGNQPRALISKTKDDKEP
                     QVHIYSN"
     gene            complement(8137..9675)
                     /gene="putP"
                     /locus_tag="O7798_001154"
     CDS             complement(8137..9675)
                     /gene="putP"
                     /locus_tag="O7798_001154"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500611.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sodium/proline symporter PutP"
                     /protein_id="HDC2863421.1"
                     /translation="MLTMGTALSQQVDANWQTYIMIAVYFLILIVIGFYGYKQATGNL
                     SEYMLGGRSIGPYITALSAGASDMSGWMIMGLPGSVYSTGLSAMWITIGLTLGAYINY
                     FVVAPRLRVYTELAGDAITLPDFFKNRLNDKNNVLKIISGLIIVVFFTLYTHSGFVSG
                     GKLFESAFGLDYHFGLILVAFIVIFYTFFGGYLAVSITDFFQGVIMLIAMVMVPIVAM
                     MNLNGWGTFHDVAAMKPTNLNLFKGLSFIGIISLFSWGLGYFGQPHIIVRFMSIKSHK
                     MLPKARRLGISWMAVGLLGAVAVGLTGIAFVPAYHIKLEDPETLFIVMSQVLFHPLVG
                     GFLLAAILAAIMSTISSQLLVTSSSLTEDFYKLIRGEEKAKTHQKEFVMIGRLSVLVV
                     AIVAIAIAWNPNDTILNLVGNAWAGFGASFSPLVLFALYWKGLTRAGAVSGMVSGALV
                     VIVWIAWIKPLAHINEIFGLYEIIPGFIVSVIVTYVVSKLTKKPGAFVETDLNKVRDI
                     VREK"
     gene            10042..10344
                     /gene="gatC"
                     /locus_tag="O7798_001155"
     CDS             10042..10344
                     /gene="gatC"
                     /locus_tag="O7798_001155"
                     /EC_number="6.3.5.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500610.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase
                     subunit GatC"
                     /protein_id="HDC2863422.1"
                     /translation="MTKVTREEVEHIANLARLQISPEETEEMANTLESILDFAKQNDS
                     ADTEGVEPTYHVLDLQNVLREDKAIKGIPQELALKNAKETEDGQFKVPTIMNEEDA"
     gene            10346..11803
                     /gene="gatA"
                     /locus_tag="O7798_001156"
     CDS             10346..11803
                     /gene="gatA"
                     /locus_tag="O7798_001156"
                     /EC_number="6.3.5.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500609.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase
                     subunit GatA"
                     /protein_id="HDC2863423.1"
                     /translation="MSIRYESVENLLTLIKDKKIKPSDVVKDIYDAIEETDPTIKSFL
                     ALDKENAIKKAQELDELQAKDQMDGKLFGIPMGIKDNIITNGLETTCASKMLEGFVPI
                     YESTVMEKLHNENAVLIGKLNMDEFAMGGSTETSYFKKTVNPFDHKAVPGGSSGGSAA
                     AVAAGLVPFSLGSDTGGSIRQPAAYCGVVGMKPTYGRVSRFGLVAFASSLDQIGPLTR
                     NVKDNAIVLEAISGADVNDSTSAPVDDVDFTSEIGKDIKGLKVALPKEYLGEGVADDV
                     KEAVQNAVETLKSLGAVVEEVSLPNTKFGIPSYYVIASSEASSNLSRFDGIRYGYHSK
                     EAHSLEELYKMSRSEGFGKEVKRRIFLGTFALSSGYYDAYYKKSQKVRTLIKNDFDKV
                     FENYDVVVGPTAPTTAFNLGEEIDDPLTMYANDLLTTPVNLAGLPGISVPCGQSNGRP
                     IGLQFIGKPFDEKTLYRVAYQYETQYNLHDVYEKL"
     gene            11816..13243
                     /gene="gatB"
                     /locus_tag="O7798_001157"
     CDS             11816..13243
                     /gene="gatB"
                     /locus_tag="O7798_001157"
                     /EC_number="6.3.5.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500608.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase
                     subunit GatB"
                     /protein_id="HDC2863424.1"
                     /translation="MHFETVIGLEVHVELKTDSKMFSPSPAHFGAEPNSNTNVIDLAY
                     PGVLPVVNKRAVDWAMRAAMALNMEIATESKFDRKNYFYPDNPKAYQISQFDQPIGEN
                     GYIDIEVDGETKRIGITRLHMEEDAGKSTHKGEYSLVDLNRQGTPLIEIVSEPDIRSP
                     KEAYAYLEKLRSIIQYTGVSDVKMEEGSLRCDANISLRPYGQEKFGTKAELKNLNSFN
                     YVRKGLEYEEKRQEEELLNGGEIGQETRRFDESTGKTILMRVKEGSDDYRYFPEPDIV
                     PLYIDDAWKERVRQTIPELPDERKAKYVNELGLPAYDAHVLTLTKEMSDFFESTIEHG
                     ADVKLTSNWLMGGVNEYLNKNQVELLDTKLTPENLAGMIKLIEDGTMSSKIAKKVFPE
                     LAAKGGNAKQIMEDNGLVQISDEATLLKFVNEALDNNEQSVEDYKNGKGKAMGFLVGQ
                     IMKASKGQANPQLVNQLLKQELDKR"
     gene            13283..13429
                     /locus_tag="O7798_001158"
     CDS             13283..13429
                     /locus_tag="O7798_001158"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500607.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDC2863425.1"
                     /translation="MIADLDAIEGLFISIEVKLLLTLFIVHVNGKNINFINALALIIL
                     RQTV"
     gene            13954..14901
                     /locus_tag="O7798_001159"
     CDS             13954..14901
                     /locus_tag="O7798_001159"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500606.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="diacylglycerol kinase"
                     /protein_id="HDC2863426.1"
                     /translation="MRKRARIIYNPTSGKELFKRELPDALIKLEKAGYETSAYATEKI
                     GDATLEAERAMHENYDVLIAAGGDGTLNEVVNGIAEKPNRPKLGVIPMGTVNDFGRAL
                     HIPNDIMGALDVIIEGHSTKVDIGKMNNRYFINLAAGGQLTQVSYETPSKLKSIVGPF
                     AYYIKGFEMLPQMKAVDLRIEYDGNVFQGEALLFFLGLTNSMAGFEKLVPDAKLDDGY
                     FTLIIVEKSNLAELGHIMTLASRGEHTKHPKVIYEKAKAINISSFTDLQLNVDGEYGG
                     KLPANFLNLERHIDVFAPNDIVNEELINNDHVDDNLIEE"
     gene            14982..16343
                     /gene="rlmD"
                     /locus_tag="O7798_001160"
     CDS             14982..16343
                     /gene="rlmD"
                     /locus_tag="O7798_001160"
                     /EC_number="2.1.1.190"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500605.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA (uracil(1939)-C(5))-methyltransferase
                     RlmD"
                     /protein_id="HDC2863427.1"
                     /translation="MQAIAKNDIKTGTVVDLTHEGHGVVKIDRFPIFIPQALINEQIE
                     YKIIKVKKNFAIGKLLNINTRSENRVAPPCIYYERCGGCQLQHLSYEAQLEMKKEQVI
                     NLFQRKAHFDNSKINDTVGMTDPWRYRNKSQIPVGKNEQNEVIMGFYRQRSHDIIDME
                     SCLIQDSQHQEVMNEVKSILKDLNVSIYQEQLKKGLMRHLVVRTGYHTDEMMIIFVTN
                     GKKWPQKNAVVEKILDAFPNVTSIKQNINDSHSNVIMGRQSITLYGKDTIIDQLTDST
                     FKISDQSFYQINSEQTEKLYNKAIEYAQLTGNEVVLDTYCGIGTIGLYMAPLAKHVYG
                     VEVVPSAIEDAQQNATINQCNNTTFVCGKAEEVILQWKAQGIKPDVVMVDPPRKGCDE
                     TFIQTLLTLEPKRIVYISCNPATQQRDALLLAEKYQLEEVTPVDMFPQTTHVETVALF
                     NLK"
     gene            16513..17043
                     /locus_tag="O7798_001161"
     CDS             16513..17043
                     /locus_tag="O7798_001161"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500604.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3267 domain-containing protein"
                     /protein_id="HDC2863428.1"
                     /translation="MHKIDLTTNNFQMRRFIILQLVIALFVILFTYKWALGVTAVVDQ
                     NIIINLVYGFAGFIILLILHELIHRALFLLFKKDSKPMFNIKKDRILFQTADACFNKW
                     QFSIIMLSPLILLSTGLLILIKVFGYSSLIFMFSMHTAYCFIDILLVALTISSSFKYV
                     QQDEDSIYLYHQKPTQ"
     gene            17290..18360
                     /gene="dinB"
                     /locus_tag="O7798_001162"
     CDS             17290..18360
                     /gene="dinB"
                     /locus_tag="O7798_001162"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011302771.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase IV"
                     /protein_id="HDC2863429.1"
                     /translation="MTERRIIHIDMDYFFAQVEMRDNPKLKGKPVIVGGKASSRGVVS
                     TASYEARKYGVHSAMPMSQAHKLCPNGYFVTSNFGAYRETSAQIMSIFRSYTDKVEPM
                     SLDEAYLDITELVRPDLPASKIAQYIRKDILEQTHLTASAGVSYNKFLAKLASGMNKP
                     DGMTVIDYQNVHDILMTLDIGDFPGVGKASKKVMHDNGIFNGRDLYEKTEFELIRLFG
                     KRGRGLYNKARGIDHSEVKSSRVRKSVGTERTFATDVNDDEEILRKVWELSGKTAERL
                     NKLQKSAKTVTVKIKTYQFETLSKQMSLRDSVSSEEDIYNIAYLLYNDLKDPDVPIRL
                     IGVTVGNLEQSTYKNMTIYDFI"
     gene            complement(18428..18982)
                     /locus_tag="O7798_001163"
     CDS             complement(18428..18982)
                     /locus_tag="O7798_001163"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500602.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3'-5' exonuclease"
                     /protein_id="HDC2863430.1"
                     /translation="MIQDAFVALDFETANGKRTSICSVGMVKVIDSQITETFHTLVNP
                     QDYFSQQNIKIHGIQPEDVENAPTFDYVFPYMMQFIADLPVVAHNAAFDMNVLHQSIQ
                     NIGLPTPNLTYFCSYQLAKRTVDSYRYGLKHMMEFYQLDFHGHHDALNDAKACAMITF
                     RLLKNYENLTYVTNIYGKNLKDKG"
     gene            19197..19289
                     /locus_tag="O7798_001164"
     CDS             19197..19289
                     /locus_tag="O7798_001164"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500601.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDC2863431.1"
                     /translation="MTKNTIISLENEKTQINDSENESSDLRKAK"
     gene            complement(19371..>19851)
                     /gene="ftnA"
                     /locus_tag="O7798_001165"
     CDS             complement(19371..>19851)
                     /gene="ftnA"
                     /locus_tag="O7798_001165"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500600.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="H-type ferritin FtnA"
                     /protein_id="HDC2863432.1"
                     /translation="EALNDQMNHEYFAAHAYMAMAAYCDKESYEGFANFFIQQAKEER
                     FHGQKIYNYINDRGAHAEFRAVSAPKIDFSSILETFKDSLSQEQEVTRRFYNLSEIAR
                     QDKDYATISFLNWFLDEQVEEESMFETHINYLTRIGDDSNALYLYEKELGARTFDEE"
BASE COUNT         7299 a         2885 c         3672 g         5995 t
ORIGIN      
        1 ttgtttattt ttattaaaaa atgttctgtt tttgaaaatt cgagtataca tacgatagga
       61 gttaaaaaaa tgattgaacg ctattctaga gaagaaatgt ctaatatttg gactgatcaa
      121 aatcgctatg aagcatggtt agaagtggaa attttagcat gtgaagcatg gagtgaatta
      181 ggacatatac cgaaagctga cgtacaaaaa attcgtcaaa acgcaaaggt aaatgtcgaa
      241 cgtgcacaag aaattgaaca agaaacgcgc catgatgttg tagcctttac tagacaagtt
      301 tctgaaacgc taggtgaaga acgtaagtgg gtacattatg gtttaacttc tactgatgtt
      361 gtagatacag ctttaagttt cgttattaaa caagcaaatg acattattga aaaagattta
      421 gaaagattta tcgacgtttt agctgaaaaa gcaaaaaatt ataaatatac attgatgatg
      481 ggacgtacac atggagtgca tgcagaacca actacatttg gtgtcaaaat ggcattgtgg
      541 tacacggaaa tgcaacgtaa cttacaacgt ttcaaacaag taagagaaga aattgaagta
      601 gggaaaatga gtggtgcagt aggtactttt gctaacattc ctcctgaaat agaaagttat
      661 gtgtgtaaac atttaggtat tggcacagcg cctgtatcaa cgcaaacatt gcaacgcgat
      721 cgacatgcat actatattgc gacattagca ttaatcgcga catcactaga aaaatttgcc
      781 gttgaaatac gtaaccttca aaaaaccgaa acgagagaag ttgaagaagc atttgcaaaa
      841 ggccaaaaag gttcatctgc aatgcctcat aaacgaaatc caattggttc tgaaaatatc
      901 acaggtattt caagagtcat tcgtggttat attactacag cttatgagaa tgtgccatta
      961 tggcatgaaa gagatatttc tcattcttct gctgagcgta ttatgttacc agatgttaca
     1021 atagcactag attatgcatt gaatcgtttc acaaatattg tggaccgttt aactgtattt
     1081 gaagataata tgcgtaataa catagataaa acatttggtc tgattttctc acaacgtgtc
     1141 ttattagcat taattaataa aggtatggtt cgtgaagaag catacgacaa agtacaacca
     1201 aaagcgatga tatcttggga aacgaaaaca ccgttccgtg aattaatcga acaagatgag
     1261 tctattacaa gtgttttaac aaaagaagaa ttggatgaat gtttcgatcc taaacatcat
     1321 ttgaatcaag ttgacactat tttcgaacgc gctggattag cataaaatta aataaagtaa
     1381 cgattcagat ttaataaaat ataaatcgct acactttaat agattaatgc gttaaaatga
     1441 cataaagaat aaaattatag gggttgtttc gatatgcaaa ttgaaaaatt acgaggtgca
     1501 gcgttagatg aattgtttga tgcaatacta acgttagaaa atagagaaga atgttaccaa
     1561 tttttcgatg atttgtgtac tgtaaatgaa attcaatcac tgtctcaaag attacaagtt
     1621 gctaaaatga ttaagcaagg ttatacctat gcaacgattg aacaagaatc tggagcatcg
     1681 actgcaacga tttctagagt gaagcgttca ttacaatggg gtaatgatgc ttatacaatg
     1741 attttagatc gtatgaatat tgaaacaaat gaataataaa tgaacgataa acaatggtta
     1801 tctatctgca ctaataaggt agataatcat tgttttttca cgaaaaaatt tacagagtaa
     1861 aagaacttaa atttcatatt aagtctttag aactcgacac ttaaaaatgc tataatcata
     1921 tgtatgttaa aaaaggagtt tcggaaaatg tatgacatta aaaaatggcg ccatattttt
     1981 aaattagacc cagctaaaca tatttcagat gatgatttag atgcgatttg tatgtctcaa
     2041 acagatgcaa ttatgattgg tggaactgat gacgttactg aagataatgt cattcattta
     2101 atgagcagag taagaagata cccattgcct ttagtacttg aaatatcaaa catcgaaagt
     2161 gtaatgcctg gttttgattt ttattttgta cctacagtac tgaacagtac agatgttgta
     2221 tttcacaatg gtacattatt agaagcgctt aaaacatatg gacatagtat agattttgag
     2281 gaagtaatat ttgaagggta tgtcgtgtgc aatgctgata gcaaagtggc aaaacatacc
     2341 aaagcaaata cagatttaac aacagaagat ttagaagcat atgcccaaat ggtcaatcat
     2401 atgtatcgat taccggttat gtatatagag tatagtggca tttatggcga cgtatcaaag
     2461 gttcaagctg tctcagaaca tctaacagaa acgcaacttt tttatggtgg cggtatttcc
     2521 tcagaacaac aagcgacaga gatggcagct attgcagata caattatcgt cggtgatatt
     2581 atttataaag atattaaaaa agctttaaaa acagtaaaaa taaaggagtc tagtaaatga
     2641 atgcgttatt aaatcatatg aatacagagc aaagtgaagc tgtaaagaca acagaaggac
     2701 cattgttaat tatggcaggt gctggttcag ggaagacacg tgttttaaca catagaattg
     2761 cttatttatt agacgaaaaa gatgtctcac catacaatgt tttggctatt acttttacaa
     2821 ataaagctgc aagagaaatg aaagaacgtg ttcaaaaatt agtaggtgat caagcagaag
     2881 ttatttggat gtcaacattc cactcaatgt gtgttcgtat tttacgtcgt gatgcagatc
     2941 gaattggtat agaacgcaat tttacgataa ttgatcctac agaccaaaaa tctgttatta
     3001 aagacgtctt aaaaaatgaa aatattgata gtaaaaagtt tgaacctcgt atgtttatcg
     3061 gtgcgatcag taatttgaaa aatgaactta aaacacctgc agatgctcaa aaagaagcca
     3121 cagattatca ctcgcaaatg gtagcaacgg tttatagtgg atatcaacgc caattgtcac
     3181 gtaatgaagc gttagatttt gatgacctta ttatgacaac gattaactta tttgagcgtg
     3241 taccagaagt tctagaatat tatcagaaca aattccaata tattcatgta gatgagtatc
     3301 aagatactaa taaagcacaa tacacattag ttaaattatt agcaagtaag tttaaaaact
     3361 tatgtgttgt aggtgactca gatcagtcaa tttatggttg gcgtggtgct gatattcaaa
     3421 atatcttatc atttgaaaaa gactatccag aagcgaatac aatcttttta gagcaaaatt
     3481 atcgttcgac gaaaacgatt ttaaatgcgg ctaacgaagt gattaaaaat aattctgaac
     3541 gtaagccaaa aggactgtgg actgcaaata cgaatggtga gaaaattcat tactatgaag
     3601 caatgacgga acgtgatgaa gcggaatttg taatacgaga aattatgaag catcaacgta
     3661 atggtaagaa atatcaagat atggcaattt tatatagaac gaatgcacaa tcacgtgtac
     3721 ttgaggaaac attcatgaaa tctaatatgc catacacaat ggttggtggc caaaagttct
     3781 atgaccgtaa agaaatcaaa gatttattaa gttatttgcg tataattgcc aatagtaatg
     3841 atgacattag tttgcaacgt attattaatg ttccaaaaag aggtgtaggt ccttcatctg
     3901 ttgaaaaagt tcaaaactat gcacttcaaa acaatatcag tatgtttgat gcacttggag
     3961 aagctgattt tatcggattg tcaaaaaagg tgacacaaga gtgtcttaat ttttacgagt
     4021 taatccaaag cttgataaaa gaacaagaat ttttagaaat tcatgaaata gttgatgaag
     4081 tattacaaaa gtctggctat cgagaaatgc ttgaacgtga aaatacatta gaatctcgaa
     4141 gtagattaga aaacatcgat gaatttatgt cagtaccaaa agactatgag gaaaataccc
     4201 cattagaaga acagtcatta attaactttt taacggattt atcgttagta gctgatattg
     4261 atgaggcaga tactgaaaat ggcgtaacac taatgacgat gcactcggct aagggccttg
     4321 aatttccaat tgtctttata atggggatgg aagaatcttt attcccacat attagagcga
     4381 ttaagagtga agatgatcat gaaatgcaag aagaacgtcg tatttgttat gtagcaatta
     4441 caagggctga agaggtgtta tatatcactc atgcgacatc aagaatgtta tttggtcgcc
     4501 ctcagtcaaa tatgccatcc agatttttaa aggaaattcc agaatcacta ttagaaaatc
     4561 attcaagtgg caaacgacaa acgatacaac ctaaggcaaa accttttgct aaacgcggat
     4621 ttagtcaacg aacaacgtca acgaaaaaac aagtattgtc atctgattgg aatgtaggtg
     4681 acaaagtgat gcataaagcc tggggagaag gcatggtgag taatgtaaac gagaaaaatg
     4741 gctcaatcga actagatatt atctttaaat cacaagggcc aaaacgtttg ttagcgcaat
     4801 ttgcaccaat tgaaaaaaag gaggattaag ggatggctga tttatcgtct cgtgtgaacg
     4861 agttacatga tttattaaat caatacagtt atgaatacta tgtagaggat aatccatctg
     4921 taccagatag tgaatatgac aaattacttc atgaactgat taaaatagaa gaggagcatc
     4981 ctgagtataa gactgtagat tctccaacag ttagagttgg cggtgaagcc caagcctctt
     5041 tcaataaagt caaccatgac acgccaatgt taagtttagg gaatgcattt aatgaggatg
     5101 atttgagaaa attcgaccaa cgcatacgtg aacaaattgg caacgttgaa tatatgtgcg
     5161 aattaaaaat tgatggctta gcagtatcat tgaaatatgt tgatggatac ttcgttcaag
     5221 gtttaacacg tggtgatgga acaacaggtg aagatattac cgaaaattta aaaacaattc
     5281 atgcgatacc tttgaaaatg aaagaaccat taaatgtaga agttcgtggt gaagcatata
     5341 tgccgagacg ttcattttta cgattaaatg aagaaaaaga aaaaaatgat gagcagttat
     5401 ttgcaaatcc aagaaacgct gctgcgggat cattaagaca gttagattct aaattaacgg
     5461 caaaacgaaa gctaagcgta tttatatata gtgtcaatga tttcactgat ttcaatgcgc
     5521 gttcgcaaag tgaagcatta gatgagttag ataaattagg ttttacaacg aataaaaata
     5581 gagcgcgtgt aaataatatc gatggtgttt tagagtatat tgaaaaatgg acaagccaaa
     5641 gagagtcatt accttatgat attgatggga ttgttattaa ggttaatgat ttagatcaac
     5701 aggatgagat gggattcaca caaaaatctc ctagatgggc cattgcttat aaatttccag
     5761 ctgaggaagt agtaactaaa ttattagata ttgaattaag tattggacga acaggtgtag
     5821 tcacacctac tgctatttta gaaccagtaa aagtagctgg tacaactgta tcaagagcat
     5881 ctttgcacaa tgaggattta attcatgaca gagatattcg aattggtgat agtgttgtag
     5941 tgaaaaaagc aggtgacatc atacctgaag ttgtacgtag tattccagaa cgtagacctg
     6001 aggatgctgt cacatatcat atgccaaccc attgtccaag ttgtggacat gaattagtac
     6061 gtattgaagg cgaagtagca cttcgttgca ttaatccaaa atgccaagca caacttgttg
     6121 aaggattgat tcactttgta tcaagacaag ccatgaatat tgatggttta ggcactaaaa
     6181 ttattcaaca gctttatcaa agcgaattaa ttaaagatgt tgctgatatt ttctatttaa
     6241 cagaagaaga tttattacct ttagacagaa tggggcagaa aaaagttgat aatttattag
     6301 ctgccattca acaagctaag gacaactctt tagaaaattt attatttggt ctaggtatta
     6361 ggcatttagg tgttaaagcg agccaagtgt tagcagaaaa atatgaaacg atagatcgat
     6421 tactaacggt aactgaagcg gaattagtag aaattcatga tataggtgat aaagtagcac
     6481 aatctgtagt tacttattta gaaaatgaag atattcgtgc tttaattcaa aaattaaaag
     6541 ataaacatgt taatatgatt tataaaggta tcaaaacatc agatattgaa ggacatcctg
     6601 aatttagtgg taaaacgata gtactgactg gtaagctaca tcaaatgaca cgcaatgaag
     6661 catctaaatg gcttgcatca caaggtgcta aagttacaag tagcgttact aaaaatacag
     6721 atgtcgttat tgctggtgaa gatgcaggtt caaaattaac aaaagcacaa agtttaggta
     6781 ttgaaatttg gacagagcaa caatttgtag ataagcaaaa tgaattaaat agttagaggg
     6841 gtatgtcgat gaagcgtaca ttagtattat tgattacagc tatctttata ctcgctgctt
     6901 gtggtaacca taaggatgac caggctggaa aagataatca aaaacataac aatagttcaa
     6961 atcaagtaaa agaaattgca acggataaaa atgtacaagg tgataactat cgtacattgt
     7021 taccatttaa agaaagccag gcaagaggac ttttacaaga taacatggca aatagttata
     7081 atggcggcga ctttgaagat ggtttattga acttaagtaa agaagtattt ccaacagata
     7141 aatatttgta tcaagatggt caatttttgg acaagaaaac aattaatgcc tatttaaatc
     7201 ctaagtatac aaaacgtgaa atcgataaaa tgtctgaaaa agataaaaaa gacaagaaag
     7261 cgaatgaaaa tttaggactt aatccatcac acgaaggtga aacagatcct gaaaagattg
     7321 cagaaaaatc accagcctat ttatctaaca ttttagagca agatttttat ggtggtggag
     7381 atacaaaagg taagaatatt aaaggtatga cgattggttt agctatgaat agtgtttatt
     7441 actataaaaa agaaaaagat ggatcgactt ttagtaaaaa actagatgat agcgaagtta
     7501 aaaagcaagg taaacaaatg gctagtgaga tattatcaag gttacgtgaa aatgatgatt
     7561 taaaagatat accaattcat tttgcaattt ataagcaatc aagtgaagat tcaatcacac
     7621 caggtgaatt tatcactcaa gcgactgcag aaaagagtca aacaaagctt aatgaatggc
     7681 ataatatcaa tgaaaaatca gctttattac cttcttcaac agcagcagat tatgatgaaa
     7741 atttaaataa taatttcaag caatttaatg ataatttgca atcatatttt tctaatttca
     7801 cacaagcagt agggaaagtt aaatttgttg ataaaaagcc acaacgatta gtagtagatt
     7861 taccaatcga ttactatgga caagctgaaa caattggtat tacacagtac gttactgaac
     7921 aagcgaataa atatttcgat aaaatcgata actatgaaat tcgtattaaa gatggtaacc
     7981 aaccacgtgc tttaattagt aagacaaaag atgacaaaga accgcaagtt catatttaca
     8041 gtaattaatt gtaaattaaa gataataaaa aggtaccaat gttagtcata attttgatta
     8101 acattagtac ctttttaatt tgttaagact tatgaattat ttttctctaa cgatgtcacg
     8161 aactttgttt aagtcagttt caacaaatgc accaggtttt ttagtaagtt tacttacaac
     8221 atatgtaacg attacactta caataaatcc aggaataatt tcatataagc cgaatatttc
     8281 gttgatatgt gccaatggtt taatccacgc aatccaaacg ataacgacta aggcacctga
     8341 aaccattcca cttacagcac cggcacgtgt caaacctttc cagtaaagtg caaatagcac
     8401 aagtggactg aacgatgcac caaatccggc ccaagcgtta cctactaagt ttagaattgt
     8461 gtcgtttgga ttccatgcaa tcgcgatggc aacaattgct acaactaata cagataatct
     8521 tccaatcata acaaattctt tttggtgcgt tttagctttt tcttcaccac gaattaattt
     8581 ataaaagtct tccgttagtg aactagatgt tacaagtaat tgtgaagaaa tcgtgctcat
     8641 aattgcagct agaatcgcag caagtaagaa accacctaca agaggatgga agagtacttg
     8701 actcatcacg atgaataatg tctcaggatc ttctagttta atatgataag caggtacgaa
     8761 tgcaatacct gttaaaccaa cagccacagc gcctaataaa ccaacagcca tccagctaat
     8821 acctaaacgt ctagctttag gtagcatctt gtgtgattta atagacataa accttacaat
     8881 gatatgaggt tgaccgaaat aacctaatcc ccatgaaaat agagagataa ttcctataaa
     8941 tgataaccct ttaaataaat ttaaatttgt aggtttcata gctgctacat catgaaacgt
     9001 tccccagccg tttaaattca tcatagcaac aatagggacc ataaccatcg caattaacat
     9061 aatgacacct tggaagaaat ctgtaattga tacagctaaa tatccaccaa agaaagtata
     9121 gaaaatgaca atgaaagcaa ctaatattaa accgaaatga taatctaatc caaaagcact
     9181 ttcaaatagt ttaccaccag atacgaaacc agaatgtgta tataatgtaa agaatactac
     9241 gataatcaat ccagaaataa tctttaacac attattttta tcgtttaaac gatttttaaa
     9301 gaaatctggt aatgtaattg catctccagc taattcggta taaacacgaa gtctaggagc
     9361 aacaacaaag taatttatat aagcacctaa tgttaaaccg attgtaatcc acatagctga
     9421 tagaccagtg ctatagacag aaccaggtag ccccataatc atccatccac tcatatctga
     9481 agctccagct gataatgcag taatatacgg tccaatacta cgtccaccta acatgtactc
     9541 gcttaggtta ccagttgctt gcttgtaacc gtaaaagcca ataacgatta gtatcaagaa
     9601 gtagacggca atcataatat aagtttgcca attggcatct acttgttgac ttaatgctgt
     9661 ccccattgta agcatgataa acactccctt tatttaattt ataatttagt tacttgaaaa
     9721 cattatacat aaagataaat gtttagaaaa gtaggaaaat taaatttatt ctttttgaaa
     9781 tacttgtata ccaatataga aagcgttttc gtattttttg gatatgagca aatttttata
     9841 attaaaattg cataatcata atattgaatt gggttgtcta atattaaaag agtgttgttt
     9901 tcataaaaaa tgatttgata aacgaatgat aatgtttata cagtttatat gaaattaaag
     9961 tagcacctca taaatactta gatttttaat tggaaatttg atacaattta gtgatgaatg
    10021 acttaaagga ggcttttatt aatgacaaaa gtaacacgtg aagaagttga gcatatcgcg
    10081 aatcttgcaa gacttcaaat ttctcctgaa gaaacggaag aaatggccaa cacattagaa
    10141 agcattttag attttgcaaa acaaaatgat agcgctgata cagaaggcgt tgaacctaca
    10201 tatcacgttt tagatttaca aaacgtttta cgtgaagata aagcaattaa aggtattcca
    10261 caagaattag ctttgaaaaa tgccaaagaa acagaagatg gacaatttaa agtgcctaca
    10321 atcatgaatg aggaggacgc gtaagatgag cattcgctac gaatcggttg agaatttatt
    10381 aactttaata aaagacaaaa aaatcaaacc atctgatgtt gttaaagata tatatgatgc
    10441 aattgaagag actgatccaa caattaagtc ttttctagcg ctggataaag aaaatgcaat
    10501 caaaaaagcg caagaattgg atgaattaca agcaaaagat caaatggatg gcaaattatt
    10561 tggtattcca atgggtataa aagataacat tattacaaac ggattagaaa caacatgtgc
    10621 aagtaaaatg ttagaaggtt ttgtgccaat ttacgaatct actgtaatgg aaaaactaca
    10681 taatgaaaat gccgttttaa tcggtaaatt aaatatggat gagtttgcaa tgggtggttc
    10741 aacagaaaca tcttatttca aaaaaacagt taacccattt gaccataaag cagtgccagg
    10801 tggttcatca ggtggatctg cagcagcagt tgcagctggc ttagtaccat ttagcttagg
    10861 ttcagacaca ggtggttcaa ttagacaacc ggctgcatat tgtggcgttg tcggtatgaa
    10921 accaacatac ggtcgtgtat ctcgatttgg attagttgct tttgcatctt cattagacca
    10981 aattggtcca ttgactcgaa atgtaaaaga taatgcaatc gtattagaag ctatttctgg
    11041 tgcagatgtt aatgactcta caagtgcacc agttgatgat gtagacttta catctgaaat
    11101 tggtaaagat attaaaggat taaaagttgc attacctaaa gaatacttag gtgaaggtgt
    11161 agctgatgac gtaaaagaag cagttcaaaa cgctgtagaa actttaaaat ctttaggtgc
    11221 tgtcgttgag gaagtatcat tgccaaatac taaatttggt attccatcat attacgtgat
    11281 tgcatcatca gaagcttcgt caaacctttc tcgttttgac ggaattcgtt atggttatca
    11341 ttctaaagaa gctcattcat tagaagaatt atataaaatg tcaagatctg aaggtttcgg
    11401 taaagaagta aaacgtcgta ttttcttagg tacatttgca ttaagttcag gttactatga
    11461 tgcttactat aaaaaatctc aaaaagttag aacattgatt aaaaatgact ttgataaagt
    11521 attcgaaaat tatgatgtag tagttggtcc aacagcgcct acaactgcgt ttaatttagg
    11581 tgaagaaatt gatgatccat taacaatgta tgccaatgat ttattaacaa caccagtaaa
    11641 cttagctgga ttacctggta tttctgttcc ttgtggacaa tcaaatggcc gaccaatcgg
    11701 tttacagttc attggtaaac cattcgatga aaaaacgtta tatcgtgtcg cttatcaata
    11761 tgaaacacaa tacaatttac atgacgttta tgaaaaatta taaggagtgg aaatcatgca
    11821 ttttgaaaca gttataggac ttgaagttca cgtagagtta aaaacggact caaaaatgtt
    11881 ttctccatca ccagcgcatt ttggagcaga acctaactca aatacaaatg ttatcgactt
    11941 agcatatcca ggtgtcttac cagttgttaa taagcgtgca gtagactggg caatgcgtgc
    12001 tgcaatggca ctaaatatgg aaatcgcaac agaatctaag tttgaccgta agaactattt
    12061 ctatccagat aatccaaaag catatcaaat ttctcaattt gatcaaccaa ttggtgaaaa
    12121 tggatatatc gatatcgaag tcgacggtga aacaaaacga atcggtatta ctcgtcttca
    12181 catggaagaa gatgctggta agtcaacaca taaaggtgag tattcattag ttgacttgaa
    12241 ccgtcaaggt acaccgctaa ttgaaatcgt atctgaacca gatattcgtt cacctaaaga
    12301 agcatatgca tatttagaaa aattgcgttc aattattcaa tacactggtg tatcagacgt
    12361 taagatggaa gagggatctt tacgttgtga tgctaacatc tctttacgtc catatggtca
    12421 agaaaaattt ggtactaaag ccgaattgaa aaacttaaac tcatttaact atgtacgtaa
    12481 aggtttagaa tatgaagaaa aacgccaaga agaagaattg ttaaatggtg gagaaatcgg
    12541 acaagaaaca cgtcgatttg atgaatctac aggtaaaaca attttaatgc gtgttaaaga
    12601 aggttctgat gattaccgtt acttcccaga gcctgacatt gtacctttat atattgatga
    12661 tgcttggaaa gagcgtgttc gtcagacaat tcctgaatta ccagatgaac gtaaagctaa
    12721 gtatgtaaat gaattaggtt tacctgcata cgatgcacac gtattaacat tgactaaaga
    12781 aatgtcagat ttctttgaat caacaattga acacggtgca gatgttaaat taacatctaa
    12841 ctggttaatg ggtggcgtaa acgaatattt aaataaaaat caagtagaat tattagatac
    12901 taaattaaca ccagaaaatt tagcaggtat gattaaactt atcgaagacg gaacaatgag
    12961 cagtaaaatt gcgaagaaag tcttcccaga gttagcagct aaaggtggta atgctaaaca
    13021 gattatggaa gataatggct tagttcaaat ttctgatgaa gcaacacttc taaaatttgt
    13081 aaatgaagca ttagacaata acgaacaatc agttgaagat tacaaaaatg gtaaaggcaa
    13141 agctatgggc ttcttagttg gtcaaattat gaaagcgtct aaaggtcaag ctaatccaca
    13201 attagtaaat caactattaa aacaagaatt agataaaaga taatttaaat catcaaacta
    13261 tgaagattta aaaaataaac ccttgattgc tgacttagat gcaatcgagg gtttatttat
    13321 atctatagaa gtcaaattac ttttaacttt attcattgta catgttaatg gtaaaaatat
    13381 taattttatt aatgcgttag ctttaattat attaaggcaa actgtataat aaaaaggtat
    13441 aaaacatttt tgtataaaga caacattata tttacaacat cattttaaag gtaaaatagc
    13501 ataactgacg aagtctatat aatgaagaac ggcaaaaaat gctgaataaa taacaagctt
    13561 tgtacatatt gagatagtat ttgtttaaga tacaagttgg tctttaacga tattaagaat
    13621 gatgaaataa gactgagcct gggtcataaa ttcaatgtcc taggcactac aatgttatat
    13681 tggctgtagt tgactgaaag aaaatacgct tgtaacaagc ttttttcaat tctagtgggg
    13741 ccccaacata gaagctgact ttctgtcagc ttacaataat gtgcaagttg gggtggggcc
    13801 ccaacataga gaatttcgaa aggaaattct acagacaatg caagttgggg tagaacgaaa
    13861 taaattttgt taaatattat ttctgtccca ctccctatta gacgaaacaa agatgaagtt
    13921 aaaatatatg aattttaagt agagggataa gatatgagga aacgtgctag aatcatttat
    13981 aacccgacat caggtaaaga gctatttaaa agagaattac ctgatgcctt aataaaatta
    14041 gaaaaagcgg gatatgaaac gagtgcatat gcaaccgaga aaataggtga tgccacactt
    14101 gaagcagaaa gagctatgca tgaaaattat gatgtattaa tcgctgcagg tggtgatgga
    14161 acattaaatg aagtagttaa tggtatcgca gaaaagccta atcgtcctaa gctaggtgtc
    14221 attcctatgg gtactgttaa tgactttgga cgtgcattgc atatacctaa tgacatcatg
    14281 ggggcacttg atgtcatcat tgaaggtcat tctactaaag tagatattgg taaaatgaat
    14341 aatcgatact ttattaattt agctgcaggc ggacaattga cgcaagtctc ttatgaaaca
    14401 ccgagtaaat tgaaatctat tgttggtcca tttgcttatt acatcaaagg tttcgaaatg
    14461 ttacctcaaa tgaaagctgt agatttaaga attgaatatg atggtaatgt tttccaagga
    14521 gaagcattat tattcttttt aggtttaaca aattcaatgg caggatttga aaaattagtg
    14581 ccggacgcta agttagatga cggctatttt acgttaatta tagttgaaaa atcaaacctt
    14641 gcagaacttg gtcatattat gactttagct tcaagaggag aacatactaa gcatcctaaa
    14701 gttatttatg aaaaagcaaa ggcaattaat atttcatcat tcacagactt acaactaaat
    14761 gtagatggag aatatggtgg taaattacca gcgaatttct taaatctaga acgtcatata
    14821 gatgtctttg cacctaatga tattgtaaat gaagagttaa taaataatga tcatgttgat
    14881 gacaatttaa tcgaagaata aacagaaata gtgaaatata taatggcagg ttaggaagcg
    14941 cataattttg ttcctaacct gttcattttg gaggtaaaat tttgcaagca atagctaaaa
    15001 atgacataaa aacgggaaca gttgttgatt taacgcatga aggccatggt gtcgtaaaaa
    15061 tagatcgctt tcctattttc ataccacaag ctttaattaa tgaacaaatt gaatataaaa
    15121 ttatcaaagt aaaaaagaac tttgcgatag gtaagttgct taatataaat acgagaagtg
    15181 agaatcgtgt tgcaccgcca tgtatatatt atgaacgttg tggtgggtgc caacttcaac
    15241 acttatcata cgaagcacaa cttgaaatga aaaaggaaca agtgattaat ttgtttcagc
    15301 gaaaagcgca ttttgataat tctaagatta acgatacagt tggcatgaca gatccttgga
    15361 gatatcgaaa caagtcccag attccagttg gtaagaatga acagaatgaa gttattatgg
    15421 gcttttatcg tcaaagaagc catgacatta ttgacatgga aagttgttta atacaagatt
    15481 cacaacatca agaagtgatg aatgaagtta aatctatttt aaaagattta aatgtaagta
    15541 tttatcaaga acaattgaaa aaaggtttaa tgagacattt ggttgtaaga acaggatatc
    15601 atacagacga aatgatgatt atttttgtaa ctaatggtaa aaagtggcca caaaaaaatg
    15661 ctgttgttga gaagatatta gatgcatttc ctaatgtgac aagcattaaa caaaacatta
    15721 atgatagcca ctctaatgtt attatgggac gtcaatctat aacgctatat ggtaaagata
    15781 caattattga tcaattaaca gatagtacat ttaaaataag tgatcagtca ttctaccaaa
    15841 ttaattctga acaaacagag aaattatata ataaagcaat tgagtatgcg caattgacag
    15901 gtaatgaagt tgtattagat acctattgtg gtattggaac aatagggcta tatatggcac
    15961 cacttgcaaa acatgtatac ggtgttgaag tagtaccttc tgcaattgaa gacgcacaac
    16021 aaaatgcgac tataaaccaa tgcaataata caacttttgt ctgtgggaaa gctgaagaag
    16081 ttattttaca atggaaagca caagggatta aaccagatgt tgtaatggtt gatccgccaa
    16141 gaaagggctg tgacgaaacg tttattcaga ctttgcttac attagaacct aagcgtattg
    16201 tctatatttc atgtaatccc gcaacacagc aacgtgatgc attattatta gctgaaaaat
    16261 atcaacttga agaggtaaca ccggtagata tgtttccaca aacaacacat gttgagacag
    16321 tggcattatt caatttgaaa tagcgcacat gatttgagat aaaatttcgc cttaataagt
    16381 gaagaaagaa gtcgtatatt aaaattttat tacagccaat ttactttctt gatatgaact
    16441 ttttaaatta aatgtgacat tgtatactat atttaaagaa gaataagaat gtcatgatcg
    16501 ggagggttgg taatgcataa aattgattta acgacaaata attttcaaat gcgaaggttt
    16561 attatcttgc aacttgttat tgcgttattc gtgattttat ttacgtataa gtgggcgtta
    16621 ggtgtcacag cggttgtcga tcaaaatatc atcatcaatc ttgtatatgg gtttgctgga
    16681 ttcattattt tattgatttt acatgaactt atccatagag cattatttct tttatttaaa
    16741 aaagatagca aacctatgtt taatataaaa aaagacagaa tcttattcca aacagcagat
    16801 gcttgcttca acaaatggca attctcaatt attatgctgt caccactaat cctattaagt
    16861 actggcttgc ttattttaat taaggtattt ggttattcat cacttatttt tatgtttagt
    16921 atgcataccg cttattgctt tatagatatt ctgcttgttg cattaacaat atctagtagt
    16981 tttaaatatg ttcaacaaga tgaagatagt atttatttgt atcatcaaaa gccgactcaa
    17041 taataaattt taatatgatg ataccaacaa aatgaatttg cttgaattat ttcagattac
    17101 ctatgttttc ttactcaatc gtcttcatca tcatgcttaa atagcaattg attttataac
    17161 aacttgtagt tatctcaata tagttatcgc taagtgcaag atttatgtaa aaaaatcgta
    17221 cacagcgtat aattatgttg agatattttt gtgcgttata aaagtaaaaa ttagtaggga
    17281 ggtgagcact tgactgagag acgaattatt catatagata tggactattt ttttgcacaa
    17341 gtcgaaatga gagataaccc caaattgaaa gggaaaccag tcattgttgg tggtaaagca
    17401 agcagtaggg gtgttgtctc tacggcatcc tatgaagcac gaaaatacgg cgtccattca
    17461 gcaatgccta tgtcacaagc gcataaatta tgtccaaatg gatactttgt cacaagtaat
    17521 tttggtgctt accgagaaac atctgcgcag attatgtcta ttttccgaag ttatacagat
    17581 aaggtagaac cgatgtcatt ggatgaagcg tatttagata ttacagaatt agtgagacca
    17641 gaccttcctg cttcgaaaat tgctcagtat attagaaaag atattctaga gcagacacat
    17701 ttaacagcat ctgcaggtgt ttcttataac aaatttttag ctaaattagc gagtggtatg
    17761 aataaacctg atggtatgac tgtgattgat tatcaaaatg tccatgatat tttgatgacg
    17821 ttggatattg gagattttcc aggcgtaggt aaagcttcca aaaaagtaat gcatgataat
    17881 ggtattttta acggtagaga tttatatgag aaaacggaat ttgaattaat acgtttgttt
    17941 ggaaaaagag gtcggggttt atataacaag gcacgcggta ttgaccatag tgaagtgaaa
    18001 tcatcaagag taagaaaatc agtagggact gaacgcacat ttgcaacaga cgtgaatgat
    18061 gatgaagaga ttttaagaaa agtatgggaa ttgtcaggta aaacagctga acgtctaaat
    18121 aaattacaga agtcagctaa aactgtaacg gttaaaatta aaacttatca atttgaaacg
    18181 ctatctaaac agatgagttt aagagattcg gttagttctg aagaagatat ttataatatt
    18241 gcatatttac tttataacga tttaaaagac cctgatgtac caattcgact tattggtgtc
    18301 actgtaggta atttagaaca atcaacttat aaaaatatga cgatatatga ctttatataa
    18361 aataaagctc cctgcaaagt ttacattttt acaatgctta cttttgaagg gagtatttta
    18421 tttagtccta gcctttatct tttagatttt taccataaat attagttaca tatgttaaat
    18481 tttcataatt tttcagtagc ctaaaagtaa tcattgcgca tgctttggca tcattcaatg
    18541 catcatgatg accatgaaaa tctaattgat aaaactccat catatgtttt aaaccgtatc
    18601 gatacgaatc aacggttctt ttagcaagtt gataactaca aaagtaagtt aaatttggag
    18661 ttggtaaacc aatattttga atgctttgat gtaagacgtt catatcaaat gccgcgttat
    18721 gtgcgacaac aggtaaatct gcaataaatt gcatcatata tggaaatacg tagtcaaacg
    18781 taggtgcatt ttcaacatct tctggttgta tgccatgaat tttaatattt tgttgtgaaa
    18841 aatagtcttg cggattcaca agagtatgaa atgtttctgt tatttgacta tcaatgactt
    18901 taaccattcc gacagaacaa atacttgtac gtttaccatt tgctgtttca aaatcaagtg
    18961 caacaaacgc atcttgtatc atgtagtcaa tcctttcaat taattaaatg tatatattaa
    19021 tagactttta gtcatttgct tacaaacgat acataatatt atacgtgaag gtataacgtg
    19081 aaatctatca tttggatgta actctgatta aaaagtaaat gatgatatgc tttaaaatcg
    19141 tcaaattaat tcaacatcaa atttagagtt attaacatta gtagtttaaa aaataaatga
    19201 ctaaaaatac aataattagc cttgaaaatg aaaaaacgca gatcaatgat tcagaaaatg
    19261 aatctagtga tctccgtaaa gcaaaataat atagacattg ggttattgta agtgacccaa
    19321 atgcctatca tgtcgtatga tatttatctg tctattgtag tgatgtttaa ttattcttcg
    19381 tcgaatgtac gagcgccaag ttctttttcg taaagatata atgcattgct gtcatcgccg
    19441 atacgagtta aataattgat gtgagtttca aacattgatt cttcttcgac ttgttcatct
    19501 aagaaccagt ttaagaatga gatagttgca taatctttat cttgacgagc gatttcagat
    19561 aagttataga aacgtcttgt tacttcttgt tcttgagata agctgtcttt gaaagtttct
    19621 agtatgcttg aaaagtcaat ttttggtgct gaaactgctc tgaattctgc atgtgcacct
    19681 ctgtcgttaa tatagttata aatcttttgt ccatggaaac gttcttcttt agcttgttga
    19741 atgaagaagt ttgcaaatcc ttcgtacgat tctttatcac agtatgctgc cattgccata
    19801 tatgcgtgtg ctgcaaagta ctcatggttc atttgatcat ttaatgcttc t
//
LOCUS       DALPQQ010000039        19691 bp    DNA     linear   BCT 22-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus strain K18-6-464
            SAMD00233528-rid16434743.denovo.039, whole genome shotgun sequence.
ACCESSION   DALPQQ010000039 DALPQQ010000000
VERSION     DALPQQ010000039.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMD00233528
            Sequence Read Archive: DRR236061
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 19691)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 19691)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001543423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001543423.1
            Genome Coverage       :: 77x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/22/2022 17:09:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,811
            CDSs (total)                      :: 2,743
            Genes (coding)                    :: 2,689
            CDSs (with protein)               :: 2,689
            Genes (RNA)                       :: 68
            rRNAs                             :: 2, 4, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 4, 2 (16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 54
            CDSs (without protein)            :: 54
            Pseudo Genes (ambiguous residues) :: 0 of 54
            Pseudo Genes (frameshifted)       :: 27 of 54
            Pseudo Genes (incomplete)         :: 27 of 54
            Pseudo Genes (internal stop)      :: 10 of 54
            Pseudo Genes (multiple problems)  :: 10 of 54
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..19691
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMD00233528-rid16434743.denovo.039"
                     /strain="K18-6-464"
                     /db_xref="taxon:1280"
                     /geo_loc_name="Japan: Niigata"
     gene            171..284
                     /locus_tag="O7798_001166"
     CDS             171..284
                     /locus_tag="O7798_001166"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501402.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDC2863433.1"
                     /translation="MNGILIKCLNIGGQYYLQTRMLSNVDNAEKTISRNSI"
     gene            666..926
                     /locus_tag="O7798_001167"
     CDS             666..926
                     /locus_tag="O7798_001167"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501401.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDC2863434.1"
                     /translation="MIIMRGYNGRYCSWTNTAIQCDYFNKVRQVKKDGKSDRLSNNIN
                     SNIIYRVLEKCITLYNVCSRCKRALILSEHSKKNIFNIKKAV"
     gene            936..1433
                     /locus_tag="O7798_001168"
     CDS             936..1433
                     /locus_tag="O7798_001168"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501400.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione peroxidase"
                     /protein_id="HDC2863435.1"
                     /translation="MNNRNVYDIEVSDYKGLTYKLEAFRGKVILVVNTATECIYSEQL
                     KKLETLFQKYKDRGFVVLSFPNNNFDNRQPGSNEEILKISREKFGVTFPVLAKISVNG
                     NDEHPLFTHLKNEQPGIFGSPIKWNFTKFIIDRQGNVVNRFLPMEDPLDISTNIEILL
                     QESSS"
     gene            complement(1541..1633)
                     /locus_tag="O7798_001169"
     CDS             complement(1541..1633)
                     /locus_tag="O7798_001169"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501399.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDC2863436.1"
                     /translation="MSVINAYSNASLLFFIYLLFIMYQISLSVK"
     gene            1828..3708
                     /locus_tag="O7798_001170"
     CDS             1828..3708
                     /locus_tag="O7798_001170"
                     /EC_number="1.8.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501398.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="assimilatory sulfite reductase (NADPH)
                     flavoprotein subunit"
                     /protein_id="HDC2863437.1"
                     /translation="MKLNTSNSPFTEKQVTEINNLLQTLTESQQQWLSGFLLANSNDT
                     TSDSNQQQLETEVWQQSQISEEQATSTTYMLQNKEPHIEANQRHVTVLYGSESGNAMR
                     LAEIFSERLSDIGHQVVLMSMDEYDTTNIAQLEDLFIITSTHGEGEPPDNAWDFFEFL
                     EDDNAPNLNHVRYSVLALGDQTYEFFCQAGKDVDVLLENLGAERICKRVDCDIDYEED
                     AEKWMADIINIIDTTSEGIQSESVISESIKSAKEKKYSKSNPYQAEVLANINLNGTDS
                     NKETRHIEFLLDDFSESYEPGDCIVALPQNDPELVEKLISMLGWDPQSPVPINDHGDT
                     VPIVEALTSHFEFTKLTLPLLKNADIYFDNEELSERIQDESWAREYVINRDFIDLITD
                     FPTIELQPENMYQILRKLPPREYSISSSFMATPDEVHITVGTVRYQAHGRERKGVCSV
                     HFAERIKPGDIVPIYLKKNPNFKFPMKQDIPVIMIGPGTGIAPFRAYLQEREELGMTG
                     KTWLFFGDQHRSSDFLYEEEIEEWLENGNLTRVDLAFSRDQEHKEYVQHRIMEESKRF
                     NEWIEQGAAIYICGDEKCMAKDVHQAIKDVLVKERHISQEEAELLLRQMKQQQRYQRD
                     VY"
     gene            3771..4376
                     /locus_tag="O7798_001171"
     CDS             3771..4376
                     /locus_tag="O7798_001171"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501397.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-binding protein"
                     /protein_id="HDC2863438.1"
                     /translation="MNMPLMIDLTNKNVVIVGGGVVASRRAQTLNQYVEHMTVISPTI
                     TEKLQNMVDNGVVIWKEKEFEPSDIVDAYLVIAATNEPRVNEAVKKALPEHALFNNVG
                     DASNGNVVFPSALHRDKLTISVSTDGASPKLTKSIMAELEALYPPSYSSYIDFLYTCR
                     QKIKVLDITYNEKQQLLSQIVSQEYLNHDKQAQFLAWLDVR"
     gene            4452..4547
                     /locus_tag="O7798_001172"
     CDS             4452..4547
                     /locus_tag="O7798_001172"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501396.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDC2863439.1"
                     /translation="MGGFVNSLIMKDLSDNDMRFKYEYYNREKDT"
     gene            4869..6239
                     /locus_tag="O7798_001173"
     CDS             4869..6239
                     /locus_tag="O7798_001173"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501395.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CitMHS family transporter"
                     /protein_id="HDC2863440.1"
                     /translation="MNSDNMWLTVMGLIIIISIVGLLIAKKINPVVGMTIIPCLGAMI
                     LGYSVTDLVGFFAKGLDQVINVVIMFIFAIIFFGIMNDSGLFKPLVKRLILMTRGNVV
                     IVCAMTALIGTIAQLDGAGAVTFLLSIPALLPLYKALNMNKYLLILLLALSAAIMNMV
                     PWGGPMARVAAVLKAKSVNELWYGLIPIQIIGFILVMLFAVYLGFKEQKRIKKAIERN
                     ELPQTQDIDVHKLVEVYERDQDVRFPVKGRARTKSWIKWVNTALTLAVILSMLINIAP
                     PEFAFMIGVSLALVINFKSVDEQMERLRAHAPNALMMAAVIIAAGMFLGVLNETGMLK
                     AIATNLIKVIPAEVGPYLHIIVGLLGVPLDLLTSTDAYYFAVLPIVEQTAGQFGVPSV
                     STAYSMVIGNIIGTFVSPFSPALWLAIGLAEANMGTYIKYAFFWIWGFAIVMLVIAML
                     MGIVTI"
     gene            6486..8336
                     /gene="nrdD"
                     /locus_tag="O7798_001174"
     CDS             6486..8336
                     /gene="nrdD"
                     /locus_tag="O7798_001174"
                     /EC_number="1.17.4.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501394.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anaerobic ribonucleoside-triphosphate reductase"
                     /protein_id="HDC2863441.1"
                     /translation="MNQIEEALTGLISKDPAIVNENANKDSDTFSTMRDLTAGIVSKS
                     YALNHLLPKHVADAHQRGDIHFHDLDYHPFQPLTNCCLIDAKNMLHNGFEIGNANVTS
                     PKSIQTASAQLVQIIANVSSSQYGGCTVDRVDELLSTYARHNEEQHRNIAKQFVKESE
                     IDRYVDQQVTKDINDAIESLEYEINTLYTSNGQTPFVTLGFGLGTDHLSRKIQQAILN
                     TRIKGLGKDRTTAIFPKLVFSIKKGTNFSPQDPNYDIKQLALKCSTKRMYPDILNYDK
                     LVEILGDFKAPMGCRSFLPSWKDAEGHFENNGRCNLGVVTLNLPRMALESAGNMTKFW
                     EIFYERIDVLHDALLYRINRLKDAVPNNAPILYKSGAFNYKLKETDDVAELFKNKRAT
                     ISMGYIGLYETATVFYGPDWETSQEAKAFTLEILKEMKRYQTKWTELYDIWFSIYSTP
                     SESLTDRFCRLDQERFGDIKDITDKGYYQNSFHYDVRKDVTPFEKLDFEKDYPYYASG
                     GFIHYCEYPKLQHNLKALEAVWDYSYDKVGYLGTNIPIDHCYECDYDGDFEATEKGFK
                     CPNCGNDNPKTVDVVKRTCGYLGNPVQRPVIKGRHKEICARVKHMKAPKE"
     gene            8333..8869
                     /gene="nrdG"
                     /locus_tag="O7798_001175"
     CDS             8333..8869
                     /gene="nrdG"
                     /locus_tag="O7798_001175"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501393.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anaerobic ribonucleoside-triphosphate reductase
                     activating protein"
                     /protein_id="HDC2863442.1"
                     /translation="MILLDIKQGQGYIAKIESNSFVDGEGVRCSVYVSGCPFNCVGCY
                     NKASQKFRYGEKYTDEILAEILDDCDHDYISGLSLLGGEPFCNLDITLNLVKAFRARF
                     GNTKTIWVWTGFLYEYLANDCTERRELLSYIDVLVDGLFIQHLFKPDLPYKGSLNQRI
                     IDVQQSLSHARMIEYIVS"
     gene            8969..9079
                     /locus_tag="O7798_001176"
     CDS             8969..9079
                     /locus_tag="O7798_001176"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501392.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDC2863443.1"
                     /translation="MIEYDLTIILIPILKVAYPFFKKVEREKWYFSGKEV"
     gene            complement(9095..9256)
                     /locus_tag="O7798_001177"
     CDS             complement(9095..9256)
                     /locus_tag="O7798_001177"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501391.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDC2863444.1"
                     /translation="MAIIEYLYNFSRNKQNLNSAKITVLSYDLTNLTNFTRMAFKNIY
                     TLLTNIYLL"
     gene            9388..11010
                     /locus_tag="O7798_001178"
     CDS             9388..11010
                     /locus_tag="O7798_001178"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501390.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BCCT family transporter"
                     /protein_id="HDC2863445.1"
                     /translation="MKKEKVMDWTTFIGTVAVLLFAVIPMMAFPKASEDIITGINSAI
                     SDSIGSIYLFMGLAIFCFVMYIAFGKYGNVTLGKASDKPEFNTFTWAAMLFCAGIGSD
                     ILYWGVIEWAFYYQVPPNGAKSMSDEALQYATQYGMFHWGPIAWAIYVLPALPIGYLV
                     FVKKQPVYKISQACRPILKGQTDKFVGKVVDILFIFGLLGGAATSLALGVPLISAGIE
                     RLTGLDGKNMILRSAILLTITVIFAISSYTGLKKGIQKLSDINVWLSFVLLAFIFIIG
                     PTVFIMETTVTGFGNMLRDFFHMATWLEPFGGIKGRKETNFPQDWTIFYWSWWLVYAP
                     FIGLFIARISKGRRLKEVVLGTIIYGTLGCVLFFGIFGNYAVYLQISGQFNVTQYLNT
                     HGTEATIIEVVHHLPFPSLMIVLFLVSAFLFLATTFDSGSYILAAASQKKVVGEPLRA
                     NRLFWAFALCLLPFSLMLVGGERALEVLKTASILASVPLIVIFIFMMISFLIILGRDR
                     IKLETRAEKLKEVERRSLRIVQVSEEEQDDNL"
     gene            11274..11960
                     /locus_tag="O7798_001179"
     CDS             11274..11960
                     /locus_tag="O7798_001179"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501389.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HDC2863446.1"
                     /translation="MTNQFKNKQSKLHDSLESITKNLYATPTSELPFDNRFLFKSFIL
                     KRETGNIVIYHSGHLGDSQQDIASLGGVSKVLMNHDHESIGGSNQVEAPYFIHENDVA
                     ALKHKISVQKQFSNRVMLDKDLEVIPAPGHTPGTTLFLWDDGHHRYLFTGDFICFEGK
                     RWRTVILGSSDREKSIQSLEMVKELDFDVLVPWVTIKDEPLVYFVENEYEKREQIQNI
                     IDRVREGENS"
     gene            complement(12148..12711)
                     /locus_tag="O7798_001180"
     CDS             complement(12148..12711)
                     /locus_tag="O7798_001180"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501388.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GbsR/MarR family transcriptional regulator"
                     /protein_id="HDC2863447.1"
                     /translation="MTRSQNKQQQLEQAKDIVINSIGQTMDLYGTNRSVGNLYGTMVF
                     EGSMTLDEMRHQLQMSKPSMSAGVKKLQEFDIVKQQFTRGSRKQHFIAEKDFFIFFRN
                     FFTKKFQREIDINVEAVKDAQAIINPLLESSDLTEAETQEAQKIKAQLDHTHVYYEWL
                     EQLTEAIESGEIFKYFPIPEQPSDSEN"
     gene            complement(12800..12895)
                     /locus_tag="O7798_001181"
     CDS             complement(12800..12895)
                     /locus_tag="O7798_001181"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501387.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDC2863448.1"
                     /translation="MKNVSIYKTTQELSFVSSLDFYLTKHLTLML"
     gene            12964..14454
                     /gene="betB"
                     /locus_tag="O7798_001182"
     CDS             12964..14454
                     /gene="betB"
                     /locus_tag="O7798_001182"
                     /EC_number="1.2.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501386.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="betaine-aldehyde dehydrogenase"
                     /protein_id="HDC2863449.1"
                     /translation="MELLKHLSQRQYIDGEWVESANKNTRDIINPYNQEVIFTVSEGT
                     KEDAERAILAARRAFESGEWSQETAETRGKKVRAIADKIKEHREALARLETLDTGKTL
                     EESYADMDDIHNVFMYFAGLADKDGGEMIDSPIPDTESKIVKEPVGVVTQITPWNYPL
                     LQASWKIAPALATGCSLVMKPSEITPLTTIRVFELMEEVGFPKGTINLILGAGSEVGD
                     VMSGHKEVDLVSFTGGIETGKHIMKNAANNVTNIALELGGKNPNIIFDDADFELAVDQ
                     ALNGGYFHAGQVCSAGSRILVQNSIKDKFEQALIDRVKKIKLGNGFDADTEMGPVIST
                     EHRNKIESYMDVAKAEGATIAVGGKRPDRDDLKDGLFFEPTVITNCDTSMRIVQEEVF
                     GPVVTVEGFETEQEAIQLANDSIYGLAGAVFSKDIGKAQRVANKLKLGTVWINDFHPY
                     FAQAPWGGYKQSGIGRELGKEGLEEYLVSKHILTNTNPQLVNWFSK"
     gene            14715..16424
                     /gene="betA"
                     /locus_tag="O7798_001183"
     CDS             14715..16424
                     /gene="betA"
                     /locus_tag="O7798_001183"
                     /EC_number="1.1.99.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501385.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="choline dehydrogenase"
                     /protein_id="HDC2863450.1"
                     /translation="MSNKNKSYDYVIIGGGSAGSVLGNRLSEDKDKEVLVLEAGRSDY
                     FWDLFIQMPAALMFPSGNKFYDWIYSTDEEPHMGGRKVAHARGKVLGGSSSINGMIYQ
                     RGNPMDYEGWAEPEGMETWDFAHCLPYFKKLEKTYGAAPYDKFRGHDGPIKLKRGPAT
                     NPLFQSFFDAGVEAGYHKTPDVNGFRQEGFGPFDSQVHRGRRMSASRAYLHPAMKRKN
                     LTVETRAFVTEIHYEGRRATGVTYKKNGKLHTIDANEVILSGGAFNTPQLLQLSGIGD
                     SEFLKSKGIEPRVHLPGVGENFEDHLEVYIQHKCKEPVSLQPSLDIKRMPFIGLQWIF
                     TRTGAAASNHFEGGGFVRSNNEVDYPNLMFHFLPIAVRYDGQKAAVAHGYQVHVGPMY
                     SNSRGSLKIKSKDPFEKPSIRFNYLSTEEDKKEWVEAIRVARNILSQKAMDPFNGGEI
                     SPGPEVQTDEEILDWVRRDGETALHPSCSAKMGPASDPMAVVDPLTMKVHGMENLRVV
                     DASAMPRTTNGNIHAPVLMLAEKAADIIRGRKPLEPQYIDYYKHGVHDENEGAIEVKP
                     YAK"
     gene            16702..16914
                     /locus_tag="O7798_001184"
     CDS             16702..16914
                     /locus_tag="O7798_001184"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501384.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sterile alpha motif-like domain-containing
                     protein"
                     /protein_id="HDC2863451.1"
                     /translation="MSFYEYIQTFKDDKTPLGELAIWIKEDDSFPKQEKLTENILSYF
                     HQMSNIDHEFLEIVKRSLSLYDQLKS"
     gene            17195..17638
                     /locus_tag="O7798_001185"
     CDS             17195..17638
                     /locus_tag="O7798_001185"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501383.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="antibiotic biosynthesis monooxygenase"
                     /protein_id="HDC2863452.1"
                     /translation="MKIYDEYRSYVIEELDDCLTIQKNNDTAYYDVLEAINDLSNDSL
                     CVLNHLYINEGQEETFEQKFLRRNKHLKNVDGFKALRFLRPRTAGRHYIIITLWENRQ
                     AFYHWQNSAEYKHTHKHRGTSKGADVKIINRELSYNIRIELADMV"
     gene            17832..19430
                     /locus_tag="O7798_001186"
     CDS             17832..19430
                     /locus_tag="O7798_001186"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501382.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AMP-binding protein"
                     /protein_id="HDC2863453.1"
                     /translation="MQKSALFAPEKYNIISEIEKYSHIPDKKAILYHNTEGEDISVTY
                     QQLIEQSNKVGNVLASHGLSKGDKVLIMMPRSIATYELYIAALKLGVAIIPCSEMLRT
                     KDLQYRITHGEINAVIALEPFTVEFEKIKEYDALTKFVIAGQKDGWISLEAEKENASN
                     KLEMADTTRDDMAILSYTSGTTGNPKAVTHCHGWGFAHLQMAPKHWLCINGDDLVWAT
                     AAPGWQKWVWSPFLSVLGSGATAFVFNGRFSPETYLELLQKYQINVLCCTPTEYRMMA
                     KLQNLNDYDLTHLHSAVSAGEPLNREVVEQFKKYFNLTVRDGYGQTESTLLIGFLKDT
                     PQRIGSMGKGIPGSSVTVVDDEGNSVPANTKGNIAVPLDLPALFKGYYKEPERTAKAQ
                     TGKYYITGDLAHVDDDGYFWFEGRRDDIIISSGYTIGPFEVEDALTNHPAVKECAVVA
                     KPHDIRGNIVKAFVILQDHTAGDDTLVKELQQFVKNEVAPYKYPREIEFVDDLPKTNS
                     GKIRRVELRDAEIEKWQQQKDSNQ"
     gene            complement(19490..>19691)
                     /locus_tag="O7798_001187"
     CDS             complement(19490..>19691)
                     /locus_tag="O7798_001187"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501381.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDC2863454.1"
                     /translation="LNLALIGIVIIVLTHTEFQLNAGDSNVFLLNWDIRGLTSYIFSF
                     LILVALVSKLILIFITRRQRTS"
BASE COUNT         6923 a         2841 c         3799 g         6128 t
ORIGIN      
        1 aggaagttaa ttacaaaatt aaaaaatcat gcatcgtgtc atttagatat tgaaaaagat
       61 gagtcaaatt tgtttcatat attttccaat aacaaattat tatatctaaa tatacaatca
      121 gaaatatatg aatagaaata tcaataagaa aaataatatg attaaaaatg atgaatggca
      181 tacttataaa gtgtctaaat attggcggtc aatattactt acaaacacga atgttaagta
      241 atgtagacaa tgctgaaaaa acaataagta gaaactctat atagaatgtt cgtttttatt
      301 tttaataatt gaataatcat tattgatgat ttaatatgta ttcggtcgca cacgatacaa
      361 agtgacttgt tttaatgata tgcaataata tgacgtttat cgtcgcgtgt aacaatgtat
      421 gagtgtgtca gtttaatttt aaaagggtta taaggatatt taataagata aaggagggct
      481 taataaacaa tcacatgtga agtttttaag gattatatga gttgggcagc tctttaatcc
      541 atagttataa cgaattttaa attgttagat ctaacgtatg gtatcagtat gtatgagttt
      601 aacttaagta ttaatctata gtttaaagag cggtctaatt gtctttttaa aaatagaaaa
      661 taaggatgat tataatgagg ggttataacg gaagatattg tagctggact aatacagcta
      721 tacaatgtga ttattttaat aaagtaagac aggtgaaaaa agacggtaaa tcggataggt
      781 tgagcaacaa cataaactcg aacattattt atcgtgtgct cgaaaaatgt atcacgctat
      841 ataatgtgtg ttcacggtgt aaacgcgcac ttattttatc agaacattct aaaaagaaca
      901 tattcaatat aaaaaaggct gtgtaggggt gtcttatgaa taatagaaat gtgtatgata
      961 tcgaagtaag tgattataaa ggcttaactt ataaattaga agcatttaga ggtaaagtga
     1021 ttttagttgt taatactgca acagaatgta tatatagcga acaattgaaa aaactagaga
     1081 ctttatttca aaaatataag gatcgtgggt ttgtagtgtt gagttttccg aataataatt
     1141 ttgacaatcg acaaccaggt tctaatgaag aaatcttgaa aattagtcgt gagaaatttg
     1201 gtgtaacatt tccagtgtta gctaaaatat ctgtgaacgg gaacgatgaa catccgttat
     1261 ttacgcattt aaagaatgaa caaccaggaa tctttgggtc cccaataaaa tggaatttca
     1321 caaaatttat aatcgatcga caaggaaatg ttgtaaatcg attcttgcca atggaagatc
     1381 cattggatat atcgacaaat atagaaatat tattgcaaga atcttcatct taaatttaaa
     1441 tttgagcgct tagtatgcaa ataacacaag agcctcttaa tgatgtacta atagtatgtt
     1501 attaggaggc attttatatt tagaaaatca gtaatttgac ctattttact gaaaggctga
     1561 tttggtacat aataaatagt aaataaataa aaaataacaa cgatgcatta ctgtatgcat
     1621 taataactga cacgacataa tcaaagtttt gtctgaatta ctgataatgt cattcaagca
     1681 acatgaaggt tgtaaatatt tgcaagtata actatcagac acaactcaag tttgttttaa
     1741 tttataccat acatattaaa aaattgacta aactatcgat aaaaaaagag tcaatcatct
     1801 atttcaagtt tattgaggtg aaaacatttg aaattaaata catctaatag tccatttaca
     1861 gaaaaacaag tcacagagat taacaatctg ctgcaaacat taacagagag ccaacaacag
     1921 tggcttagtg gttttttact agctaatagt aacgatacga caagtgatag taatcaacaa
     1981 caattagaga cagaagtgtg gcaacaatca caaatatcag aagaacaagc aacttcaaca
     2041 acgtatatgt tacaaaataa agagccacat atcgaagcta atcagcggca tgttacagtg
     2101 ctatatggtt ctgaatcagg taatgccatg cgtttagctg aaattttttc agaacgttta
     2161 agtgatatcg gacatcaagt tgttttgatg tcaatggatg aatatgatac gacaaacatc
     2221 gcgcagttag aagatttatt tattattacg tctactcatg gtgaaggaga accgcctgat
     2281 aatgcatggg atttctttga atttttagaa gacgataacg cacctaattt aaatcatgtg
     2341 agatattcag tactagcttt aggtgatcaa acatatgaat ttttctgtca agccggtaaa
     2401 gatgtagatg ttttactaga aaatctaggc gctgagcgta tatgtaagcg tgtagattgt
     2461 gatattgatt atgaagaaga cgcagaaaag tggatggcag acatcattaa tattattgat
     2521 accacatcag aaggtattca aagtgaatcg gtgataagtg aatcaattaa gtctgccaaa
     2581 gaaaagaaat attctaaatc aaatccatac caagcagaag tattagcgaa tatcaattta
     2641 aatggtaccg attcaaataa agaaacacga catatagaat ttttacttga tgattttagt
     2701 gaatcatatg aaccaggaga ttgtatagta gcattaccgc aaaacgaccc tgaattggtt
     2761 gaaaaactaa tatccatgtt aggttgggat ccgcaatctc cggtgccaat taatgatcat
     2821 ggtgatacag ttcctattgt tgaagcacta acatcacatt ttgaatttac taaattaaca
     2881 ttgccattat tgaaaaatgc agatatctat tttgacaatg aagaattatc tgaacgtatt
     2941 caagatgagt catgggcgcg tgaatatgtt ataaatcggg actttataga tttaataaca
     3001 gattttccaa ctatagaatt acaacctgag aatatgtatc aaatccttag aaaattacca
     3061 ccaagagagt attcgatttc tagtagtttt atggcaacgc cagatgaagt gcatattacc
     3121 gttggtacgg ttcgttatca agcacatgga cgtgagagaa aaggtgtatg ctcggttcat
     3181 tttgctgagc gaattaaacc aggcgatata gtaccaattt atttgaagaa aaatccgaac
     3241 ttcaaatttc cgatgaagca agatataccg gttattatga ttggaccagg tactggaatt
     3301 gctcctttta gagcatattt acaagaacgt gaagaacttg gtatgactgg aaaaacatgg
     3361 ttgttctttg gtgatcaaca ccgtagttct gactttttat atgaagaaga aatagaagaa
     3421 tggcttgaaa atggaaactt aacacgcgta gatttagcat tttcaagaga ccaagaacac
     3481 aaagaatatg tacagcatcg tataatggaa gaaagtaaac gtttcaatga atggattgag
     3541 caaggcgcag caatctatat ttgtggcgat gaaaaatgta tggcgaaaga tgtccatcaa
     3601 gccattaaag atgtattggt aaaagaacgt catatttctc aagaagaagc agagttatta
     3661 ttgcgacaaa tgaaacaaca acaacgctat caacgtgatg tttattagcg attggtgtta
     3721 aatattttaa ggtgtaatga tgtaaaaaga tataaaggat gttgctcaac atgaatatgc
     3781 cattaatgat agatttaaca aataaaaatg tcgtcatagt tggtggaggc gtcgttgcaa
     3841 gtcgtcgggc acaaacatta aatcaatacg ttgaacatat gacggtcatc agtccgacaa
     3901 tcactgaaaa acttcaaaat atggtagata acggtgtcgt catatggaaa gaaaaagaat
     3961 ttgaaccaag cgatattgta gacgcgtatc tagttattgc agcaaccaat gagccacgtg
     4021 tcaatgaagc ggtaaaaaaa gccttacctg agcatgccct ttttaataat gttggagatg
     4081 catcaaatgg caatgttgta tttccaagtg cactacaccg cgacaagcta actatcagtg
     4141 tatcaactga tggtgcgagt cctaagttga caaaatcaat tatggcagag cttgaggcgt
     4201 tatatccacc atcatacagt tcgtatatcg actttttata tacttgccga cagaaaataa
     4261 aagtacttga tataacatat aacgaaaagc aacagttact gtcacaaatt gtgtcacaag
     4321 aatatttaaa tcatgacaaa caagctcaat ttttagcgtg gttggatgta agataataat
     4381 agcggaccgt ctaaccgtct aaggtaagtc ttcttatttt aactttaacg cttaatcatt
     4441 gaaattaaga catgggcggc tttgtgaata gtctaataat gaaggattta agcgataatg
     4501 atatgcgttt taaatatgaa tattacaata gagaaaaaga tacgtagaac aaacttaata
     4561 aaataggtgg ataaattgaa atctggttga agtcgttact atcatagcga cctttagcca
     4621 gattttttgt gcaatagaaa gcaataataa aaatgataga tcaaaatgaa atacaggaca
     4681 ggatatacaa ggattagtca tgccatgtta tcaagtagga aaatcaaact tcactattga
     4741 tagttacgca aaaaagattt ttttgataaa atgagataac ttaaatataa aaaattatat
     4801 taattataat atttaagtta aagaggggga ttatgtaaat tgtattaaaa gtggagggag
     4861 aaaataatat gaatagtgat aatatgtggt taacagtaat ggggctcatt attattattt
     4921 caattgtagg tttactcatt gccaaaaaga taaatccagt tgtaggtatg acaatcatac
     4981 cttgcttagg ggcaatgatt ttaggatata gtgtgacaga tttggttgga ttttttgcta
     5041 aagggttaga tcaagtcatc aacgttgtta ttatgtttat ctttgccatt attttctttg
     5101 gcatcatgaa cgatagtggt ttattcaagc cgcttgtcaa acgcttaata ttaatgacac
     5161 gaggcaatgt cgtcattgtc tgtgcaatga cagctttaat tggcacaata gcccaattag
     5221 atggggccgg tgcggtaaca tttttgcttt ctattcctgc attattacct ttatataaag
     5281 cgttaaatat gaataaatat ttattgattt tactattagc attaagcgcg gcgattatga
     5341 acatggtacc ttggggaggt ccaatggctc gtgtagctgc agtgttaaaa gccaaaagtg
     5401 tcaatgaatt atggtatgga ttaataccta ttcaaataat aggtttcatt cttgttatgt
     5461 tgtttgcggt atatcttgga tttaaagaac agaaacgtat caaaaaagca atagagagaa
     5521 atgaattacc gcaaacacaa gatatagatg tacataaatt agttgaagta tatgaacgag
     5581 atcaagatgt aaggtttcct gtaaaaggac gtgcaagaac aaaatcatgg ataaaatggg
     5641 tgaatacagc tttaacttta gctgttattc tatcgatgtt aataaatatt gcgccacctg
     5701 aatttgcatt catgataggt gtttcgttgg cacttgttat taattttaaa tcagtggatg
     5761 aacaaatgga acgattaaga gcgcatgcgc cgaatgcatt aatgatggct gcagtgatta
     5821 ttgcagcagg tatgttttta ggtgtactaa atgaaaccgg tatgcttaaa gcgattgcga
     5881 ccaatttaat caaagtgatt cctgcagaag taggaccata cttgcatatt attgtaggtt
     5941 tacttggcgt accattagat ttactaacta gcacagacgc ttattatttt gctgtgttac
     6001 cgattgtcga acaaacagca gggcaatttg gtgtaccgtc tgtatcaaca gcttattcaa
     6061 tggtcatagg gaatattata ggtacatttg tcagcccatt ttcaccagcc ttatggttgg
     6121 caattggttt agcagaggca aacatgggca cgtatattaa gtatgcattc ttttggattt
     6181 ggggattcgc tatcgttatg ttagtaattg caatgttgat gggcattgtg acgatttaag
     6241 tatgaaaaaa tagaaactat ggtcacgttg caaaatgaaa taatagttgc ataaacatgt
     6301 cgaaatgacg gacgaatctt taaacaattt taaaaattaa tgaaataatt gtgtagaaat
     6361 atgaatttca ctaaatgtta ataactttgt gacgttttag ttaacagact aataaaaatt
     6421 tgaaaatact atatatagtg gtataacgta atgagtagac acaatatata ggaagaaggg
     6481 gtaaaatgaa tcaaatcgaa gaagcattaa cgggtttgat ttctaaagat cctgctattg
     6541 ttaacgaaaa tgctaacaaa gatagtgata cattttcaac aatgagagat ttaacagcag
     6601 gtatcgtttc taaatcttac gcattaaatc atttattacc aaagcacgtt gcagatgcac
     6661 atcaaagagg ggacatacat tttcacgact tagattatca tccattccaa ccgttaacta
     6721 actgttgttt aatagatgct aaaaatatgc tacataatgg atttgaaata ggcaacgcga
     6781 atgtaacttc accaaaatca atacaaactg catcagcgca gcttgtacaa attatagcca
     6841 atgtttctag cagtcaatat ggtggctgta cggttgaccg cgttgacgaa ttacttagta
     6901 catatgcacg acataatgaa gaacaacata ggaatatcgc aaagcaattt gtcaaagaat
     6961 ctgaaattga tcgttatgtt gatcaacaag tcactaaaga catcaatgat gcgattgaaa
     7021 gtttagaata tgaaattaat accttatata catctaatgg acagacacct tttgtaacat
     7081 taggattcgg cttaggtaca gatcatttaa gtcgcaaaat tcaacaagct atcttaaata
     7141 ctcgtatcaa aggcttagga aaagaccgca cgacagcgat tttcccgaaa cttgtatttt
     7201 caattaaaaa aggaaccaac tttagtccgc aagatccgaa ctatgacatt aaacaactag
     7261 cattaaagtg ttcaacgaaa cgtatgtatc cagatatttt aaattatgac aaactcgtag
     7321 aaatattagg tgatttcaaa gcgccaatgg gttgtcgttc atttttacca agttggaaag
     7381 atgcggaagg tcattttgaa aataatggtc gttgtaatct tggtgttgtt acacttaatt
     7441 tacctagaat ggcattagaa tctgccggta atatgacgaa attctgggaa atcttttatg
     7501 aacgtatcga tgtgttacat gatgcattac tttatcgtat aaatcgtttg aaagatgctg
     7561 taccgaataa cgcaccgatt ttatataaaa gtggcgcatt taactataaa ttaaaagaaa
     7621 cagatgatgt tgctgagtta tttaaaaata aacgtgcaac gatttcaatg ggctatatag
     7681 ggttgtatga aacagctact gttttctatg gtccagactg ggaaacatct caagaagcaa
     7741 aagcatttac gcttgaaatt cttaaagaaa tgaaacgtta tcaaacgaaa tggacagaat
     7801 tatatgacat ttggttcagt atttacagta cgccgagtga atcgctaacg gatcgttttt
     7861 gtcgtttaga ccaagagaga tttggagata ttaaagacat tacagataaa ggatattatc
     7921 aaaactcttt ccattatgat gtacgtaaag atgttacacc ttttgaaaag ttagattttg
     7981 aaaaagatta tccttattat gcgagtggtg gtttcattca ctattgtgag tatccgaaat
     8041 tgcaacacaa tttgaaagca ctagaagcgg tatgggacta ctcttatgac aaagttggtt
     8101 acttaggtac aaatattccg attgatcatt gttatgaatg tgattacgat ggagattttg
     8161 aagcaactga aaaaggattt aaatgcccga actgtggcaa tgataatcct aaaacagttg
     8221 atgtcgttaa acgaacatgt ggttacctag gcaatccagt tcaacgtcca gtaattaaag
     8281 gccgtcataa agaaatttgc gcacgagtaa aacatatgaa agcgcctaaa gaatgatact
     8341 tttagacatt aaacaaggac aaggttatat tgctaaaata gaatcaaata gctttgttga
     8401 cggtgaagga gtaagatgca gtgtttatgt atcaggatgt ccatttaatt gtgttggatg
     8461 ttataacaaa gcctcacaaa agttcagata tggcgagaaa tacactgatg aaatattagc
     8521 agaaatatta gatgattgcg atcatgatta tatatctggg ctaagtctat taggtggcga
     8581 accattttgt aatttggata ttacattaaa tcttgtcaaa gcatttcgag cacgttttgg
     8641 aaatacaaag acaatttggg tatggactgg atttttatat gaatatttag caaatgattg
     8701 tacagaacgt cgagagttat tatcatacat tgacgtttta gtagatggtc tatttataca
     8761 acacttattc aaacctgatt taccatataa aggttcttta aatcaacgca ttatagatgt
     8821 acaacaatca ctctcgcatg cgcgtatgat tgaatatata gttagttgaa tatgtattag
     8881 aagtcaaggt aacattcgtt gccttggctt ctttttaggt taggtacata attgaaagtt
     8941 aataaaagca attctttata aaaatatatt gatagaatat gacctaacaa tcattttgat
     9001 accaatacta aaagttgcat atccgttttt taaaaaagtt gaaagagaaa agtggtattt
     9061 tagtgggaag gaagtctaac tttttggtag cgttttacaa taaataaata ttcgttaata
     9121 acgtataaat attcttaaat gccattctag taaaatttgt taaattcgtt aaatcgtaac
     9181 ttaacactgt tattttagcg ctattaaggt tttgtttatt acgggaaaaa ttatataaat
     9241 attcaataat tgccaagttt caaattgtat gaaatttgca ttattattaa atgttagtta
     9301 ttgtcaattt tgtgaatcaa tataattatt acattttgag ataaatcgaa acaggattca
     9361 taaaattaat aattaggggg agcacaattg aaaaaagaga aagttatgga ctggacgacc
     9421 tttataggga cagtagctgt acttcttttt gcagttatac ctatgatggc ttttccaaaa
     9481 gcaagtgaag atatcatcac tggtattaat agtgccattt ctgattcaat tggttcgata
     9541 tatttattta tggggctggc gattttttgc tttgtaatgt atatcgcatt tggtaaatat
     9601 ggtaatgtca cacttggtaa agcaagtgat aaaccagaat ttaatacatt tacatgggcg
     9661 gcaatgctgt tttgtgcagg cataggctct gatattttat actggggcgt tattgaatgg
     9721 gctttttact atcaagttcc accaaatggc gcgaaaagta tgagtgatga agcactccaa
     9781 tatgcgacgc aatatggtat gttccactgg gggccaattg cttgggctat ttatgttcta
     9841 ccagcattac caattggtta tttagtattt gttaaaaaac aaccggtgta taaaattagt
     9901 caagcttgtc gtccgatttt aaaaggtcaa acagataaat ttgtaggtaa agttgtagat
     9961 atcttattta tctttggatt gctaggtggt gcggcaacat cactagcgtt aggtgtgcca
    10021 ttaatttctg caggcataga aagattaact ggtttagatg gtaaaaatat gattttacgt
    10081 tcggccattt tattaacaat cacggttata tttgccatta gttcatatac aggattaaaa
    10141 aaaggtattc aaaagttaag tgatatcaac gtttggctat cctttgtact tttagccttt
    10201 atatttatta ttggaccgac tgtttttatt atggaaacga cagtgacagg gttcggaaat
    10261 atgttgagag atttctttca tatggcaaca tggttagaac cattcggtgg tattaaaggt
    10321 cgaaaagaaa cgaatttccc acaagactgg acaatattct actggtcatg gtggttagta
    10381 tatgcgccat ttatcggttt atttatcgct agaatttcaa aaggtcgacg ccttaaagaa
    10441 gtcgtgctag gaacaattat ttatggaacg cttggatgcg tattattctt tggtattttt
    10501 ggtaactatg ctgtgtattt acaaatttct ggacagttta atgtaacaca atatttaaat
    10561 acacatggta cagaggcaac cattattgaa gtggtgcatc atttaccatt cccatcattg
    10621 atgattgtac tattcttagt atctgctttc ttattcttag caacaacatt tgattcgggt
    10681 tcatatattt tagcggcagc atctcagaaa aaagtggtag gcgaaccatt acgtgccaat
    10741 cgtttattct gggcatttgc attgtgctta ttgccatttt cattgatgct agttggtggt
    10801 gaacgtgcat tagaagtatt gaaaactgct tcaatactgg caagtgtgcc attaattgtt
    10861 atttttattt tcatgatgat atcattttta atcattttag ggcgcgatag aattaaactt
    10921 gaaacgcgtg ctgaaaaatt aaaagaagtt gaacgtcgtt cattgcgaat cgttcaagta
    10981 tcagaagaag aacaagacga taatttataa ttcaaagcgg gtctgggacg acgaaatgaa
    11041 ttttgtgaaa atatcatttc tgttccattc cccttttttt agtagcattg taggatgaac
    11101 ttttaggttt tcattaatgt tgtactaaaa gatttaattt tttagtgctc caagtactta
    11161 tttattgtat gaagcatatt ctaaatcgaa gtttgaaaga ctctcattga ttattaaatt
    11221 aaataaaggg tactgcgtat gtacaattca aattaatcga aggatgaaat aaaatgacta
    11281 atcaatttaa aaataaacag tccaaattac atgacagttt agaatccatc acaaaaaact
    11341 tatatgcgac acctacttcg gaactgcctt ttgataatcg atttctattt aaatctttta
    11401 ttttaaaacg tgaaacaggt aatattgtta tctatcattc cggacactta ggtgactccc
    11461 aacaagacat tgcatcatta ggtggtgttt caaaagtatt gatgaatcat gatcatgaat
    11521 ctataggagg ttctaatcaa gttgaagccc cttactttat acatgaaaat gatgtggctg
    11581 cactgaaaca taagatttct gttcaaaaac aatttagtaa tcgtgtaatg ttggataagg
    11641 atttagaagt tattcccgcg cctggacata caccagggac gacactattt ttatgggatg
    11701 atggtcatca ccgttactta tttactggag attttatatg ttttgaaggg aagagatggc
    11761 gtacagttat attaggttca agtgatagag aaaaatctat tcaaagttta gagatggtta
    11821 aagaattaga ttttgatgta cttgtacctt gggttactat caaagatgaa ccgttagttt
    11881 attttgtaga aaatgaatat gaaaaacgtg aacaaataca aaatattatt gatagagtac
    11941 gtgagggcga gaatagctaa ttgaaatata ttggcgaagc aatgtaacga atctaagaaa
    12001 gccctagaaa atacctccat aattgattgt catataaaac aaaaacggta atttctattt
    12061 attgagatag aaattaccgt ttatttcgtg gacctattgc attgttttta tcatgcataa
    12121 tcatcattgt cgttgtttga gtcaatttta attttcagaa tcagaaggct gttctggaat
    12181 tgggaaatat ttgaaaattt caccgctttc aatcgcttcg gttaactgtt ctaaccattc
    12241 gtaataaaca tgtgtatgat caagctgagc tttaattttt tgtgcctctt gtgtttcagc
    12301 ttcagttaaa tcactgcttt caagtaatgg attgataata gcttgagcat cttttactgc
    12361 ttcgacattg atgtcaattt cacgctggaa ttttttagtg aaaaagtttc ggaaaaagat
    12421 gaaaaagtct ttctcggcga taaaatgttg tttgcggctt cctctcgtaa attgttgttt
    12481 aacaatatca aattcctgca atttcttaac gccagcactc atacttggtt tgctcatttg
    12541 caattgatga cgcatttcat caagcgtcat actgccttca aacaccattg tgccatataa
    12601 gtttcctaca cttctattag tgccatacaa atccattgtc tgtccaattg aattaattac
    12661 aatatctttt gcttgttcta attgttgctg tttgttctga gaacgagtca tcattgcacc
    12721 tccgtacatc attttggtca cgttaaaata aatactaata cattataaaa ccttttctaa
    12781 aaaaagacat taaaaatatt taaagcatta aagttaaatg tttcgttaaa taaaaatcta
    12841 acgaacttac aaaacttaat tcttgagttg ttttgtaaat tgacacattt ttcatttcta
    12901 tgctaacata agtttgtaaa attcgttaaa taaaaattta acaaacttaa cggaggttgt
    12961 tgaatggaac ttttaaaaca tttatctcag cgtcaatata ttgatggtga gtgggttgaa
    13021 agcgcgaata aaaatacaag agatattatc aatccttaca atcaagaagt gatatttacg
    13081 gtttctgaag ggacaaaaga ggatgcagaa cgtgcaatct tagctgcaag acgtgcgttt
    13141 gagtctggtg aatggtcgca agaaactgct gaaacaagag gtaaaaaagt acgtgccatc
    13201 gcggacaaga ttaaagaaca tcgcgaagcg ttagcacgat tagaaacatt agatactgga
    13261 aaaacgttag aagaatcata tgcagatatg gatgatattc ataatgtgtt tatgtatttt
    13321 gctggattag cagataaaga cggtggcgaa atgattgatt caccaattcc agatacagaa
    13381 agcaaaattg ttaaagaacc agtaggtgta gttacacaaa ttacaccttg gaattatccg
    13441 ttattacaag catcatggaa aattgcgcca gcgcttgcta cgggttgttc actagttatg
    13501 aaaccaagtg aaattacacc attaacaaca atacgtgttt ttgaattaat ggaagaagtt
    13561 ggtttcccta aaggaacaat taatcttatt ctaggtgcag gttctgaagt tggtgacgta
    13621 atgtcaggtc ataaagaggt tgaccttgta tcatttacag gtggcattga gactggtaag
    13681 catattatga aaaatgctgc taataatgtt acgaatattg ccttggaact tggcggtaaa
    13741 aatccaaaca ttatctttga tgatgctgat tttgaattgg cagtagacca agcgttaaat
    13801 ggtggatatt tccatgcagg tcaagtttgt tcagcaggat caagaatatt agtacaaaac
    13861 agtattaaag acaaatttga gcaagcactt attgatcgcg tgaaaaaaat caaattaggt
    13921 aatggttttg atgctgatac tgaaatggga ccagtgattt caacagaaca tcgtaataag
    13981 atcgaatctt atatggatgt agctaaagca gaaggcgcaa caattgctgt tggtggtaaa
    14041 cgtccagata gagatgattt aaaagatggt ctattcttcg agccaacagt cattacaaat
    14101 tgtgatacgt caatgcgtat tgtacaagaa gaggttttcg gacctgtcgt tactgtagaa
    14161 ggctttgaaa ctgaacaaga agcgattcaa ttagcgaatg attctatata tggtttagca
    14221 ggtgctgtat tttctaaaga tattggaaaa gcacaacgcg ttgctaacaa gttgaaactt
    14281 ggaacggtgt ggattaatga tttccatcca tattttgcac aagcgccatg gggtggatac
    14341 aaacaatcag gtatcggtag agaattaggc aaagaaggct tagaagagta ccttgtttca
    14401 aaacacattt taacaaatac aaatccacaa ttagtgaatt ggtttagcaa ataaaaatta
    14461 gataaggtga gtgccattgt aagaacacaa gacactcact ttgttttgta taagtggcga
    14521 aatgttgatt gataatttgg actaaacgca aaatgaatca tagattattt cattactgtt
    14581 agtaacaatc gtaaaaggaa aagcgagtgt tttggttagc taagtttagc aattcaacga
    14641 taaccaatca gccactaaca aatatttcat gcaatactca ctttgaaata caacaaactt
    14701 tggaggtcat aacgatgagt aacaaaaaca aatcatatga ttatgtcatc attggaggag
    14761 gcagtgcagg ttctgtacta ggtaatcgtc tgagtgaaga taaagataaa gaagtcttag
    14821 tattagaagc gggtcgcagt gattattttt gggatttatt tatccaaatg cctgctgcgt
    14881 taatgttccc ttcaggcaat aaattttacg attggattta ttcaacagat gaagaaccac
    14941 atatgggcgg tcgtaaagta gcacatgccc gaggtaaagt tttaggtgga tcaagttcga
    15001 ttaatggcat gatttatcaa cgtggtaatc caatggacta tgaaggctgg gcagaaccag
    15061 aaggtatgga aacttgggat tttgcgcact gtttaccgta ttttaaaaaa ttagaaaaaa
    15121 catacggtgc agcgccttat gataaattta gaggccatga tggaccaatt aagttaaaac
    15181 gagggccagc aacgaatcct ttattccagt cattctttga tgcaggtgtt gaagcaggct
    15241 atcataaaac acctgatgtg aatggattta gacaagaagg ttttggaccg ttcgatagtc
    15301 aagtacatcg tggtcgccga atgtcagctt caagagcata tttacatcca gcgatgaagc
    15361 gtaaaaactt aaccgttgaa acacgtgcct ttgtaactga aattcattat gaaggtagaa
    15421 gagcaactgg tgttacgtat aagaaaaatg gcaaactaca taccatcgat gctaatgaag
    15481 tcattttgtc tggtggggca ttcaatacgc cacaattact acaattatct ggtatcggtg
    15541 attcagagtt cctaaaatca aaaggcattg agccacgtgt tcatttacct ggtgtgggtg
    15601 aaaactttga agatcactta gaggtataca ttcaacataa atgtaaggaa cctgtatcat
    15661 tacagccaag cttagatatc aagcgcatgc catttattgg tttacaatgg attttcacac
    15721 gtacaggtgc agcagcatct aaccattttg aaggtggcgg atttgtacgt tcaaataacg
    15781 aagttgatta tcctaactta atgttccatt tcttaccaat agctgtaaga tatgatggtc
    15841 aaaaggcagc ggtcgcacat ggttatcaag ttcacgtagg accaatgtat tcaaactctc
    15901 gtggtagctt gaaaatcaaa tctaaagatc cattcgaaaa accaagtatc cgctttaatt
    15961 atttatcaac agaagaagat aaaaaagaat gggtagaagc aattcgtgta gcaagaaata
    16021 tcttatctca aaaagcaatg gatccattca atggtggaga aatttcacca ggaccagaag
    16081 tgcaaacaga cgaagaaatt cttgattggg ttcgtagaga tggtgaaaca gcattacacc
    16141 catcttgtag tgctaaaatg ggtcctgctt cagatccaat ggcagtagtt gacccgttaa
    16201 caatgaaagt ccacggtatg gaaaatttac gtgtagttga tgcatcagct atgccacgta
    16261 cgacaaatgg caatatacac gcacctgttt taatgttagc tgaaaaagca gcagacatta
    16321 tacgtggcag aaagccttta gagccacaat atattgatta ttataagcat ggtgttcatg
    16381 atgaaaatga aggtgcaatc gaagtaaaac catacgctaa ataaatttat atagtagact
    16441 cttagtctgg catctattgt attggtgcca ggcttttttg cgttttatct aaatgagaag
    16501 ttaatgtgtt gttcaaaaac ggtgtgtgag tatatgaact gaaaatagag ttaattgtac
    16561 attgtgatga ttaattgacc taattggcag acattaaaag agtgcacaac cttaaaaagt
    16621 tcactaaata gacatttaat tgtgttttct tgaaagcttt cgtggtagga tttatataag
    16681 taaattgaga gaaggaatac tatgagcttt tacgaatata tacaaacatt taaagatgat
    16741 aaaacaccat taggcgaatt agcgatttgg attaaagaag atgattcatt cccaaaacaa
    16801 gagaagctaa cagaaaacat tttgtcttat tttcatcaaa tgtccaatat agatcatgag
    16861 tttttagaaa ttgtaaaaag atcactttct ctgtatgatc aattaaaatc gtaaaatcag
    16921 aaataaagtt agctaaaata aaaggccggt gatttcacag atgaagttgt cggctatttt
    16981 catgactaat gttaaataat gatcatgaaa ttgaagacac aaaaatagtg ggcgactcct
    17041 gtcccccatt tgcatgaaat attaatactt tttacaaagt cttatctttt aaaaagaagc
    17101 caaactatga ttgtaattaa taaatacggg aatgaattag taatagatat aaagtaatat
    17161 gaccaaaaat ataaatgaaa tgaaggcatt tattatgaaa atttatgatg aatatagaag
    17221 ttatgtaata gaagaactgg atgattgtct cacaatacaa aaaaataatg acactgcata
    17281 ttacgatgtg ctagaagcga taaatgattt atcaaatgat tcattatgtg tgttaaatca
    17341 tttatatatt aacgaaggac aagaagaaac attcgagcaa aaatttttgc gacgtaataa
    17401 gcatttaaaa aacgttgatg gatttaaagc attaaggttt ttaagaccta gaacagctgg
    17461 tagacactat atcattatta cgctgtggga aaataggcaa gcattttatc attggcaaaa
    17521 ttcagctgag tacaagcata cacacaagca tcgtggcact tcgaaaggtg cagatgtaaa
    17581 aataattaat cgtgaattat catacaatat tcgtattgaa ttagctgata tggtctagcc
    17641 cgagatatca accctcaatc atttgaaagt ccttgaatgc tacgtcatgt caaagtgtag
    17701 tgtcgaggac tttggtattt aaccctattt aattgaaaat tctgtaaaga taggcgtatg
    17761 atgtatataa ttcatttata aaattacaat gttcatcaca ggaaaagtgg atgtatgaaa
    17821 ggaagttagt tatgcaaaag tcagctctat tcgcgcctga aaaatataac attatttcgg
    17881 aaatcgaaaa atatagccac ataccagata aaaaggcaat tttatatcat aatactgaag
    17941 gcgaagatat atcagtcact taccaacagc tcattgaaca gtctaataaa gtaggtaatg
    18001 ttttagcatc gcacggttta tctaaaggcg ataaagtact cattatgatg ccacgatcta
    18061 ttgcgacgta tgaattatat attgctgctt taaaattagg tgttgcaatc attccatgtt
    18121 ctgaaatgct aagaactaaa gatttacaat accgtatcac acatggtgaa attaatgcag
    18181 ttattgcact agagccattc acagttgaat ttgaaaaaat taaagaatat gatgcgttaa
    18241 ctaaatttgt tattgccggt caaaaagatg gatggatttc acttgaagct gaaaaagaaa
    18301 acgcaagtaa caaactagaa atggcagata cgacgcgtga tgatatggcg attctgtcat
    18361 atacatctgg tacaactggc aatcctaaag ccgttacaca ttgtcatgga tggggatttg
    18421 cacatttaca aatggcacca aaacattggt tatgtattaa tggagatgac ttagtttggg
    18481 caacagcagc accaggttgg caaaaatggg tatggagtcc tttcttatct gtattaggtt
    18541 caggtgcaac tgcttttgta tttaatggaa ggttcagtcc tgaaacatac ttagaattgc
    18601 ttcaaaaata tcaaattaat gttttatgtt gtacaccgac agaatatcgt atgatggcta
    18661 aattacagaa cttaaatgat tatgacttaa cgcatttaca tagtgccgtt tctgcaggtg
    18721 agccactaaa tcgagaagta gttgaacaat tcaagaaata ctttaattta actgtaagag
    18781 atggatatgg ccagactgaa agtaccttgc ttataggctt tttaaaagat acaccacaga
    18841 ggattggatc aatgggtaaa ggcattccgg gtagttcggt cactgtagta gatgatgagg
    18901 ggaatagcgt acctgctaat acgaaaggga atattgcagt accacttgat ttgccagcac
    18961 ttttcaaagg gtattataaa gagccagaac gtacggcgaa agcgcaaaca ggtaaatact
    19021 acatcactgg tgacttagct catgtagatg atgatggtta tttctggttt gaaggacgtc
    19081 gagatgacat tattattagt tcaggctata cgattgggcc ttttgaagtt gaagatgcgt
    19141 taacgaatca tccagccgtt aaagaatgtg ctgtagtagc aaaacctcat gatatacgag
    19201 gaaatattgt taaagcattc gttattttac aggaccatac tgcgggtgat gatacgttag
    19261 ttaaagaact acaacaattt gttaaaaatg aagttgcacc atataaatat ccgagagaga
    19321 ttgaattcgt tgacgactta ccaaaaacaa actcaggtaa aattcgtcgt gttgaactac
    19381 gagatgctga aatagaaaaa tggcaacaac aaaaagatag caatcaataa acatagcaaa
    19441 gcagtccaat gcgtaaggta tgatgatacg cactggactg cttgtttatt tatgatgttc
    19501 tttgtcgtct agttataaat attaaaatta gtttagaaac aagcgcaacc agtattaaga
    19561 atgagaaaat ataagatgtt aaacctcgaa tatcccagtt taataaaaac acattactat
    19621 caccggcatt aagttgaaac tcagtatgtg ttagaacgat aattacaata cctataagtg
    19681 caagattcaa a
//
LOCUS       DALPQQ010000040        19552 bp    DNA     linear   BCT 22-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus strain K18-6-464
            SAMD00233528-rid16434743.denovo.040, whole genome shotgun sequence.
ACCESSION   DALPQQ010000040 DALPQQ010000000
VERSION     DALPQQ010000040.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMD00233528
            Sequence Read Archive: DRR236061
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 19552)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 19552)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001543423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001543423.1
            Genome Coverage       :: 77x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/22/2022 17:09:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,811
            CDSs (total)                      :: 2,743
            Genes (coding)                    :: 2,689
            CDSs (with protein)               :: 2,689
            Genes (RNA)                       :: 68
            rRNAs                             :: 2, 4, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 4, 2 (16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 54
            CDSs (without protein)            :: 54
            Pseudo Genes (ambiguous residues) :: 0 of 54
            Pseudo Genes (frameshifted)       :: 27 of 54
            Pseudo Genes (incomplete)         :: 27 of 54
            Pseudo Genes (internal stop)      :: 10 of 54
            Pseudo Genes (multiple problems)  :: 10 of 54
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..19552
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMD00233528-rid16434743.denovo.040"
                     /strain="K18-6-464"
                     /db_xref="taxon:1280"
                     /geo_loc_name="Japan: Niigata"
     gene            45..1574
                     /gene="aur"
                     /locus_tag="O7798_001188"
     CDS             45..1574
                     /gene="aur"
                     /locus_tag="O7798_001188"
                     /EC_number="3.4.24.29"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001225028.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc metalloproteinase aureolysin"
                     /protein_id="HDC2863455.1"
                     /translation="MRKFSRYAFTSMAALTLLSTLSPAALAIDSKNKPANSDIKFEVT
                     QKSDAVKALKELPKSENVKNIYQDYAVTDVKTDKKGFTHYTLQPSVDGVHAPDKEVKV
                     HADKSGKVVLINGDTDAKKVKPTNKVTLSKDDAADKAFKAVKIDKNKAKNLKDKVIKE
                     NKVEIDGDSNKYVYNVELITVTPEISHWKVKIDAQTGEILEKMNLVKEAAETGKGKGV
                     LGDTKDININSIDGGFSLEDLTHQGKLSAFSFNDQTGQATLITNEDENFVKDEQRAGV
                     DANYYAKQTYDYYKDTFGRESYDNQGSPIVSLTHVNNYGGQDNRNNAAWIGDKMIYGD
                     GDGRTFTSLSGANDVVAHELTHGVTQETANLEYKDQSGALNESFSDVFGYFVDDEDFL
                     MGEDVYTPGKEGDALRSMSNPEQFGQPAHMKDYVFTEKDNGGVHTNSGIPNKAAYNVI
                     QAIGKSKSEQIYYRALTEYLTSNSNFKDCKDALYQAAKDLYDEQTAEQVYEAWNEVGV
                     E"
     gene            1941..2390
                     /locus_tag="O7798_001189"
     CDS             1941..2390
                     /locus_tag="O7798_001189"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501421.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arginine repressor"
                     /protein_id="HDC2863456.1"
                     /translation="MKKSKRLEIVSTIVKKHKIYKKEQIISYIEEYFGVRYSATTIAK
                     DLKELNIYRVPIDCETWIYKAINNQTEQEMREKFRHYCEHEVLSSIINGSYIIVKTSP
                     GFAQGINYFIDQLNIEEILGTVSGNDTTLILTASNDMAEYVYAKLFK"
     gene            2393..2560
                     /locus_tag="O7798_001190"
     CDS             2393..2560
                     /locus_tag="O7798_001190"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501420.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDC2863457.1"
                     /translation="MYQMNNKNLFRITCTQVSYQILTCVRVFLWKERIHSHSIDCIKN
                     FIQHVFMGIFE"
     gene            2737..3972
                     /gene="arcA"
                     /locus_tag="O7798_001191"
     CDS             2737..3972
                     /gene="arcA"
                     /locus_tag="O7798_001191"
                     /EC_number="3.5.3.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501419.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arginine deiminase"
                     /protein_id="HDC2863458.1"
                     /translation="MTDGPIKVNSEIGALKTVLLKRPGKELENLVPDYLDGLLFDDIP
                     YLEVAQKEHDHFAQVLREEGVEVLYLEKLAAESIENPQVRSEFIDDVLAESKKTILGH
                     EEEIKALFATLSNQELVDKIMSGVRKEEINPKCTHLVEYMDDKYPFYLDPMPNLYFTR
                     DPQASIGHGITINRMFWRARRRESIFIQYIVKHHPRFKDANIPIWLDRDCPFNIEGGD
                     ELVLSKDVLAIGVSERTSAQAIEKLARRIFENPQATFKKVVAIEIPTSRTFMHLDTVF
                     TMIDYDKFTMHSAILKAEGNMNIFIIEYDDVNKDIAIKQSSHLKDTLEDVLGIDDIQF
                     IPTGNGDVIDGAREQWNDGSNTLCIRPGVVVTYDRNYVSNDLLRQKGIKVIEISGSEL
                     VRGRGGPRCMSQPLFREDI"
     gene            4005..5015
                     /gene="argF"
                     /locus_tag="O7798_001192"
     CDS             4005..5015
                     /gene="argF"
                     /locus_tag="O7798_001192"
                     /EC_number="2.1.3.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501418.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ornithine carbamoyltransferase"
                     /protein_id="HDC2863459.1"
                     /translation="MTEIQKPYDLKGRSLLKESDFTKAEFEGLIDFAITLKEYKKNGI
                     KHHYLSGKNIALLFEKNSTRTRAAFTVASIDLGAHPEFLGKNDIQLGKKESVEDTAKV
                     LGRMFDGIEFRGFSQQAVEDLAKFSGVPVWNGLTDDWHPTQMLADFMTIKENFGYLEG
                     INLTYVGDGRNNIAHSLMVAGAMLGVNVRICTPKSLNPKEAYVDIAKEKASQYGGSVM
                     ITDNIAEAVENTDAIYTDVWVSMGEESEFEQRINLLKDYQVNQQMFDLTGKDSTIFLH
                     CLPAFHDTNTLYGQEIYEKYGLAEMEVTDQIFRSEHSKVFDQAENRMHTIKAVMAATL
                     GS"
     gene            5106..6536
                     /gene="arcD"
                     /locus_tag="O7798_001193"
     CDS             5106..6536
                     /gene="arcD"
                     /locus_tag="O7798_001193"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501417.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arginine-ornithine antiporter"
                     /protein_id="HDC2863460.1"
                     /translation="MNESGDNKLSKSSLIGLVIGSMIGGGAFNIMSDMGGKAGGLAII
                     IGWIITAIGMISLAFVFQNLTNERPELDGGIYSYAQAGFGDFVGFISAWGYWFSAFLG
                     NVAYATLLMSAVGNFFPIFKGGNTLPSVIVASLLLWGVHFLILKGVETAAFINSIVTV
                     AKLIPILLVIICMIIAFNFDTFKTGFFSMTSEGVLPFSWASTMSQVKSTMLVTVWVFI
                     GIEGAVIFSSRAKNKKDVGSATVIGLISVLIIYFLLTVLAQGVILQNHISQLDSPSMA
                     QVLATIVGGWGSTLVNIGLIISVLGAWLGWTLLAGELPFIVAKDGLFPKWFAKENKNG
                     APVNALLITNILVQLFLISMLFTQSAYQFAFSLASSAILYPYMFSAFYQVKYTLEHRQ
                     QATTKQWTIGIIASIYAIWLIYAAGINYLLLTMLLYIPALLVYTIVQKNNQTRLIKSD
                     YILFMIIIVLAVIGLIKLLMGTINVF"
     gene            6553..7494
                     /gene="arcC"
                     /locus_tag="O7798_001194"
     CDS             6553..7494
                     /gene="arcC"
                     /locus_tag="O7798_001194"
                     /EC_number="2.7.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501416.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbamate kinase"
                     /protein_id="HDC2863461.1"
                     /translation="MKEKIVIALGGNAIQTTEATAEAQQTAIRCAMQNLKPLFDSPAR
                     IVISHGNGPQIGSLLIQQAKSNSDTTPAMPLDTCGAMSQGMIGYWLETEINRILTEMN
                     SDRTVGTIVTRVEVDKDDPRFDNPTKPIGPFYTKEEVEELQKEQPDSVFKEDAGRGYR
                     KVVASPLPQSILEHQLIRTLADGKNIVIACGGGGIPVIKKENTYEGVEAVIDKDFASE
                     KLATLIEADTLMILTNVENVFINFNEPNQQQIDDIDVATLKKYAAQGKFVEGSMLPKI
                     EAAIRFVESGENKKVIITNLEQAYEALIGNKGTHIHM"
     gene            7593..8297
                     /locus_tag="O7798_001195"
     CDS             7593..8297
                     /locus_tag="O7798_001195"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501415.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Crp/Fnr family transcriptional regulator"
                     /protein_id="HDC2863462.1"
                     /translation="MTENFILGRNNKLEHELKALADYINIPYSILQPYQSECFVRHYT
                     KGQVIYFSPQESSNIYFLIEGNIIREHYNQNGDVYRYFNKEQVLFPISNLFHPKEVNE
                     LCTALTDCTVLGLPRELMAFLCKANDDIFLTLFALINDNEQQHMNYNMALTSKFAKDR
                     IIKLICHLCQTVGYDQDEFYEIKQFLTIQLMSDMAGISRETAGHIIHELKDEKLVVKD
                     HKNWLVSKHLFNDVCV"
     gene            8647..11442
                     /gene="clfB"
                     /locus_tag="O7798_001196"
     CDS             8647..11442
                     /gene="clfB"
                     /locus_tag="O7798_001196"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001587809.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MSCRAMM family adhesin clumping factor ClfB"
                     /protein_id="HDC2863463.1"
                     /translation="MKKRIDYLSNKQNKYSIRRFTVGTTSVIVGATILFGIGNHQAQA
                     SEQSNDTTQSSKNNASADSEKNNMIETPQLNTTANDTSDISANTNSANVDSTTKPMST
                     QTSNTTTTEPASTNETPQPTAIKNQATAAKMQDQTVPQEANSQVDNKTTNDANSIATN
                     SELKNSQTLDLPQSSPQTISNAQGTSKPSVRTRAVRSLAVAEPVVNAADAKGTNVNDK
                     VTASNFKLEKTTFDPNQSGNTFMAANFTVTDKVKSGDYFTAKLPDSLTGNGDVDYSNS
                     NNTMPIADIKSTNGDVVAKATYDILTKTYTFVFTDYVNNKENINGQFSLPLFTDRAKA
                     PKSGTYDANINIADEMFNNKITYNYSSPIAGIDKPNGANISSQIIGVDTASGQNTYKQ
                     TVFVNPKQRVLGNTWVYIKGYQDKIEESSGKVSATDTKLRIFEVNDTSKLSDSYYADP
                     NDSNLKEVTDQFKNRIYYEHPNVASIKFGDITKTYVVLVEGHYDNTGKNLKTQVIQEN
                     VDPVTNRDYSIFGWNNENVVRYGGGSADGDSAVNPKDPTPGPPVDPEPSPDPEPEPTP
                     DPEPSPDPEPEPSPDPDPDSDSDSDSGSDSDSGSDSDSESDSDSDSDSDSDSDSDSES
                     DSDSESDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDS
                     ESDSDSESDSESDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDS
                     DSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDS
                     DSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDS
                     DSRVTPPNNEQKAPSNPKGEVNHSNKVSKQHKTDALPETGDKSENTNATLFGAMMALL
                     GSLLLFRKRKQDHKEKA"
     gene            11558..12319
                     /locus_tag="O7798_001197"
     CDS             11558..12319
                     /locus_tag="O7798_001197"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501413.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="esterase family protein"
                     /protein_id="HDC2863464.1"
                     /translation="MAYISLNYHSPTIGMHQNLTVILPEDQSFFNSDTTVKPLKTLML
                     LHGLSSDETTYMRYTSIERYANEHKLAVIMPNVDHSAYANMAYGHSYYDYILEVYDYV
                     HQIFPLSKKRDDNFIAGHSMGGYGTIKFALTQGDKFAKAVPLSAVFEAQNLMDLEWND
                     FSKEAIIGNLSSVKGTEHDPYYLLDKAVAEDKQIPKLLIMCGKQDFLYQDNLDFIDYL
                     SRINVPYQFEDGPGDHDYAYWDQAIKRAITWMVND"
     gene            12564..13019
                     /locus_tag="O7798_001198"
     CDS             12564..13019
                     /locus_tag="O7798_001198"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501412.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="winged helix-turn-helix transcriptional
                     regulator"
                     /protein_id="HDC2863465.1"
                     /translation="MSTNKNDYEHMLFYFAYKTFITTADEIIEKYGMSRQHHRFLFFI
                     NKLPGITIKSLLEILEISKQGSHATLQKLKEQGLIIEKVLETDRRVKKLYSTDKGDQL
                     IAELNKAQDELLQNIYQQVGSDWYDVMEALAKGRPGFDFIKHLKDEKES"
     gene            complement(13122..13232)
                     /locus_tag="O7798_001199"
     CDS             complement(13122..13232)
                     /locus_tag="O7798_001199"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501411.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDC2863466.1"
                     /translation="MLGAWLTRSWYFLNAKYKPPTNVKITANFFIIQTPF"
     gene            complement(13302..14726)
                     /locus_tag="O7798_001200"
     CDS             complement(13302..14726)
                     /locus_tag="O7798_001200"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501410.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alkaline phosphatase"
                     /protein_id="HDC2863467.1"
                     /translation="MLSVKKATKFAVANLIIVSTVFSSVTPAIAQSDKSSKDESFAVG
                     NTKNPKNVIFLVGDGMGPSFNTAYRYYKNDPHAKEMTPTAFDSYLKGTNRTYSNDPKQ
                     NITDSAAGGTAFSSGHKTYNGAIGVDSNKQKVKTVLERAKEKGKSTGLVSTAELTDAT
                     PAAYAAHVTSRDDKNEIAKQFYKDKINGKHKVDVLLGGGAKYFGKSNGNLDKKFKKDG
                     YDLATNSKELSKSDKDKVLGLFADKNMPLAIDASKDEPSLADMQQSALSKLERNKKGF
                     FLMVEGASIDKSAHSNDITGVMSEMEGFEKAFDDAIQYAKKHKDTLVVATADHSTGGL
                     TIGKDKGYEWNPQPIKSMKHSGSYMTEKMAKGEDPEKVINEGYGFEFSQDDMKKVKKE
                     NKKLKRLLKKEKDEKSAEVETQTKALQHAIQKPVNDKSYTGWTSDGHTGEDVNTYAYG
                     PRSESFSGNIENTESAKIIFDIFK"
     gene            14924..15124
                     /locus_tag="O7798_001201"
     CDS             14924..15124
                     /locus_tag="O7798_001201"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501408.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDC2863468.1"
                     /translation="MILVMLSPLLIIFFIVLSILEERKRTKKKQLEKEKVNTLNQNTN
                     DTESSNQEPSLQQDKEQKDNKG"
     gene            15150..15815
                     /gene="nsaR"
                     /locus_tag="O7798_001202"
     CDS             15150..15815
                     /gene="nsaR"
                     /locus_tag="O7798_001202"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501407.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nisin susceptibility-associated two-component
                     system response regulator NsaR"
                     /protein_id="HDC2863469.1"
                     /translation="MKILIVEDDFVIAESLASELKKWNYGVIVVEQFDDILSIFNQNQ
                     PQLVLLDINLPTLNGFHWCQEIRKTSNVPIIFISSRIDNMDQIMAIQMGGDDFIEKPF
                     NLSLTIAKIQALLRRTYDLSVANDSLTVKGCTLILDEAKVVYQEQNIQLSLTELQILK
                     LLFQNEDKYVSRTALIEKCWESENFIDDNTLAVNMTRLRKKLNTIGVNDFIITKKNVG
                     YKV"
     gene            15826..16713
                     /gene="nsaS"
                     /locus_tag="O7798_001203"
     CDS             15826..16713
                     /gene="nsaS"
                     /locus_tag="O7798_001203"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501406.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nisin susceptibility-associated two-component
                     system sensor histidine kinase NsaS"
                     /protein_id="HDC2863470.1"
                     /translation="MTFLKSITQEIAIVIVIFALFGLMFYLYHLPLEAYLLALGVILL
                     LLLIFIGIKYLSFVKTISQQQQIENLENALYQLKNEQIEYKNDVESYFLTWVHQMKTP
                     ITAAQLLLERDEPNVVNRVRQEVIQIDNYTSLALSYLKLLNETSDISVTKISINNIIR
                     PIIMKYSIQFIDQKTKIHYEPCHHEVLTDVRWTSLMIEQLINNALKYARGKDIWIEFD
                     EQSNQLHVKDNGIGISEADLPKIFDKGYSGYNGQRQSNSSGIGLFIVKQISTHTNHPV
                     SVVSKQNEGTTFTIQFPDE"
     gene            16821..17576
                     /locus_tag="O7798_001204"
     CDS             16821..17576
                     /locus_tag="O7798_001204"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501405.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HDC2863471.1"
                     /translation="MLLEVKHVKKVYGKGLNATTALNQMNLSVGAGEFVAIMGESGSG
                     KSTLLNLIASFDGLTEGDIIVDGAHLNNMKNKSKALYRQQMVGFVFQDFNLLPTMTNK
                     ENIMMPLILAGAKRKDIEQRVHQLAVQLHLEGFLNKYPSEISGGQKQRIAIARALVTK
                     PTILLADEPTGALDSKTSKALMMLFQEIHQLEQTILMVTHSNIDASYAERVIFIKDGR
                     LYHEIYRGEESQLAFQQRITDSLALVNGGSVNI"
     gene            17573..>19552
                     /locus_tag="O7798_001205"
     CDS             17573..>19552
                     /locus_tag="O7798_001205"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501404.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HDC2863472.1"
                     /translation="MKLRLLWHIVRRQFITQRLVIIPFILAVSVLFMIEYTLVSIGLN
                     SYIKQKNDFLVPFIIIANFFMALLTFIFIFYANHFMMSQRRKEFSIFMTLGMTKKSMR
                     LIVVMETILQFVIISVVSIAGGYLLGAIFFLFIQKIMGSEVATLRYYPFDSVAMFITL
                     IIIAVLMGMLLIFNLFSINFQRPITYQHRSDSSVISRWLRYVLIVIGSAALYLGYFIA
                     LQQDTTFGAFFKIWIVIGLVIIGTYAFFVGISEIIISILQQVSKVYYHPRYFFVVVGM
                     RVRLKMNAVSLATITLLCTFLIVTLTMTLTTYRDMNHTITKLITNDYDLSFSDNSKSQ
                     IERQQTIENIKRDIQGSVNAKDFKVYETTLFRASLEKNRAYYKLKQASDDIPIDFIGN
                     EGAIFSRQSVMITAFTAQDYNRYHQNKLHLDNQSIGMITNVPIFKKQSKVGLNNEVFK
                     VKQLDAHALNLMMIQDSMVLIVKDNNQLQKVKGFYAHEQKNSTISINFNVFGKTKLTT
                     SQIQKLSKKYDASINSKSEMLMVWDRLTGGLIFVGGVVSIVLVIGIFLMMYYKQVSEA
                     YANQHNYDIMKKLGLDNGRIAKITRNQMTFLFAIPITVALIHTLISSNIVYTLLNMIG
                     INNHHIFLTSYVLAVIIISFLYMAMYKITSYIYAKV"
BASE COUNT         7008 a         2902 c         3618 g         6024 t
ORIGIN      
        1 attttattta taagctgttt ttaagatttc aggaggaatg aaatgtgagg aaattttcaa
       61 gatatgcatt tacaagtatg gcagcattaa ccttgttgag cactttatca ccagcagcat
      121 tagcgattga ttcaaaaaat aaaccagcta attctgatat taaatttgag gtgactcaaa
      181 agagtgatgc ggtcaaagca ttaaaagaat tgcctaaatc cgaaaatgta aaaaatattt
      241 atcaagatta cgctgttact gatgtaaaaa ctgataaaaa aggatttacg cattatacat
      301 tgcaaccgag tgttgatggt gttcatgcac ctgacaaaga agtgaaagta cacgcagaca
      361 aatcaggaaa agtcgtttta atcaatgggg atactgatgc gaagaaagta aagccaacga
      421 ataaagtgac attaagtaaa gatgacgcag ccgacaaagc atttaaagca gttaagattg
      481 ataagaataa agcgaaaaat cttaaagata aagtcattaa agaaaacaaa gttgaaatcg
      541 atggtgacag taataaatac gtttataatg ttgagttaat tacagtgaca ccagaaattt
      601 cacattggaa agttaaaatt gatgctcaaa ctggcgaaat tttagaaaaa atgaacttag
      661 ttaaagaagc tgcagaaact ggtaaaggaa aaggtgtact tggcgataca aaagatatca
      721 atatcaatag tattgacggt ggatttagcc tagaagattt aacgcatcaa ggtaaattat
      781 cagcatttag ctttaatgat caaacaggtc aagcaacatt gattactaat gaagatgaaa
      841 acttcgtaaa agatgagcaa cgtgctggcg tagatgcaaa ttattacgct aaacaaacat
      901 atgattatta caaagacaca tttggtcgtg aatcatatga caaccaaggt agtccaattg
      961 tttcattaac gcatgttaat aactacggtg gtcaagataa cagaaataat gccgcatgga
     1021 tcggtgacaa aatgatctat ggtgatggtg atggtcgcac attcacaagt ttatcgggtg
     1081 caaatgacgt agtagcacac gaattaacac acggtgtgac acaagagaca gcgaacttag
     1141 aatataagga ccagtcaggc gctctaaatg aaagcttttc agatgttttt ggatactttg
     1201 tagatgacga ggatttctta atgggtgaag atgtctacac acctggaaaa gagggagacg
     1261 ctttacgcag catgtcaaac ccagaacaat ttggtcaacc agctcatatg aaagactatg
     1321 tattcactga aaaagataat ggtggcgtac atacgaattc tggaattcca aataaagcag
     1381 cttataacgt gattcaagca atagggaaat ctaaatcaga acaaatttac taccgagcat
     1441 taacggaata cttaacaagt aattcaaact tcaaagattg taaagatgca ttataccaag
     1501 cggctaaaga tttatatgac gagcaaacag ctgaacaggt gtatgaagca tggaatgaag
     1561 taggcgtgga gtaaaaatat ataaacaaga agaagtaatg ttaaacactt ataaataatt
     1621 aaattttaaa tacagcttat atatggggta tacctacatt gataattgac tttgtaggta
     1681 taccctctct ttgtaattag atgagaggag tgtgagggtt gtctgccgaa agactactcg
     1741 gcagtctaaa atcattacaa gtagtagata tgtgataatt aaatgctgac ttagaataca
     1801 aaattcattt taaaagttgt cacaaaaaat ttacatgtat ttttattatc ttttgcaaaa
     1861 caaagtgtta aattataaat gaaacatgca tgaatttatt ttttaataca agaaacgtaa
     1921 ctaccaaagg agtttacaat atgaagaaaa gtaaacgatt agaaattgtt tctacaatag
     1981 ttaaaaagca taagatttat aaaaaagaac aaatcatttc atatattgaa gaatattttg
     2041 gtgtaagata tagtgcaaca acaattgcta aagacttgaa ggaactaaat atatatcgtg
     2101 tccctatcga ttgtgagaca tggatttata aagctattaa taatcaaaca gaacaagaga
     2161 tgagagaaaa gtttagacac tattgtgaac atgaagttct aagttcaatc atcaatggtt
     2221 catacattat cgtcaaaacc tcacctggtt tcgcccaagg cataaactat tttatcgatc
     2281 agctaaatat agaagagata ttaggtacgg tgagtggaaa tgacactaca ttaatcttaa
     2341 ctgcctcaaa tgatatggca gaatacgtat atgcaaaatt atttaaatag acatgtatca
     2401 aatgaataat aaaaatttgt ttcgtatcac gtgtactcaa gttagttacc aaatattaac
     2461 ttgtgtacgc gtttttttat ggaaagaaag aattcatagt cattcaattg actgtataaa
     2521 aaactttata caacatgttt ttatgggtat ttttgaataa aaaatgtata ttttgaccca
     2581 aaataccttt atttatgtat aaaaatccat tattatgtat tgtataacaa aaagatatga
     2641 aattttcgac tttctttatg tgaatataat cacatgtaag cgtttgaaga ttgtctatac
     2701 tctaaatgaa ttcaaagata aaaggaggaa atagacatga cagatggtcc aattaaagta
     2761 aatagcgaaa ttggagcttt aaaaactgtg ttacttaagc gtcctggaaa agaattagaa
     2821 aatttagtac ctgattattt agatggatta ctatttgatg atattccata tttagaagta
     2881 gctcaaaaag agcatgacca ttttgcgcag gtgctaagag aagagggtgt tgaagtactt
     2941 taccttgaga agttagcagc tgaaagtatt gaaaatcctc aagtaagaag tgaatttatt
     3001 gatgatgtat tagcagagtc taaaaaaaca atattaggtc atgaagaaga aattaaggca
     3061 ttatttgcga cactttctaa tcaagaactt gtagataaaa taatgtcagg ggtacgtaag
     3121 gaagaaatta atccgaaatg tacacatcta gtagagtata tggatgataa gtatccattc
     3181 tatttagatc caatgccaaa cctttatttt actagagatc cacaagcctc aataggacac
     3241 ggtataacaa tcaatcggat gttctggaga gcacgacgac gagaatcaat atttattcaa
     3301 tatattgtaa agcatcatcc tagatttaaa gatgcgaata ttccaatctg gttagatcga
     3361 gattgcccat tcaatattga aggcggcgat gaacttgttt tatctaaaga tgtcttggct
     3421 ataggcgttt cagaacgtac atctgcacaa gctattgaaa agttagcgcg acgtattttt
     3481 gaaaatccgc aggcgacgtt taaaaaagta gtagcaattg aaattccaac tagtcgaact
     3541 tttatgcact tagatacagt atttacaatg atagattatg acaaatttac aatgcattca
     3601 gccattttaa aggcagaagg caatatgaat atatttatta ttgaatatga tgacgtaaat
     3661 aaagatattg ccatcaaaca atctagtcat ttaaaagata ctttagaaga cgtactaggt
     3721 atagatgata tccaattcat tccaacagga aatggtgatg tcattgatgg tgctagagag
     3781 caatggaatg atggctcaaa tacattatgt ataagaccag gcgttgtagt gacttacgat
     3841 agaaactatg tatcgaatga tttattgaga caaaaaggca ttaaagtcat tgaaatatct
     3901 ggtagcgagt tggtacgtgg acgtgggggc cctagatgta tgagtcaacc attattcaga
     3961 gaagacattt aacgtaataa attatagaaa cgagggtgaa aataatgaca gaaattcaaa
     4021 aaccgtatga tttaaaaggc agatcattat taaaagaaag tgattttacc aaagcagaat
     4081 tcgaaggact tattgatttt gcaattacat taaaagagta taagaaaaac ggtattaagc
     4141 atcactactt atctggaaaa aatattgcac tactattcga aaagaattcg acgagaacgc
     4201 gtgctgcgtt tacagttgcg tctattgatt taggtgcgca tccagaattt ttaggaaaaa
     4261 atgatattca attaggcaaa aaagaatctg tagaggatac tgcgaaagta ttaggtagaa
     4321 tgttcgatgg tattgaattc cgtggttttt cacaacaagc tgttgaagat ttagcgaagt
     4381 tctctggtgt accggtgtgg aatggattaa cagacgattg gcatcctaca caaatgttag
     4441 ctgattttat gacaataaaa gagaattttg gatatctaga aggaataaac ttaacttacg
     4501 ttggagatgg acgtaataat attgcgcatt cattaatggt agcaggtgct atgttaggtg
     4561 ttaatgtaag aatttgtaca cctaaatcat taaatccaaa agaggcatat gttgatattg
     4621 caaaagaaaa agcgagtcaa tatggtggtt cagtcatgat tacggataat attgcagaag
     4681 cagttgaaaa tacagatgct atatatacag atgtttgggt atcgatgggt gaagaaagtg
     4741 aatttgaaca acgtattaat ttattaaaag actatcaagt gaatcaacag atgtttgatt
     4801 taacaggtaa agattcaacg atattcttac attgtttacc agcattccat gatacaaata
     4861 cactttatgg acaagaaatt tatgaaaaat atggattagc tgaaatggaa gttacagacc
     4921 aaatctttag aagtgaacat tcaaaagtgt ttgatcaagc tgaaaataga atgcatacaa
     4981 ttaaggcagt aatggcagca acattgggga gttaatcact aaatggaacg atatgaatat
     5041 gatgtgtctg atgatataag tgtcatgtac agacacctca tattggtatt aaaggagaaa
     5101 tgaatatgaa cgaatcagga gataacaaac tcagtaaatc ttctttaatt ggactagtta
     5161 taggatccat gattggtggc ggtgcgttca atataatgtc tgatatgggc ggtaaagccg
     5221 gtggattagc cattattatt ggttggatta ttacagctat aggaatgatt tcattagcgt
     5281 tcgtatttca aaatttaacc aatgaacggc cggagctaga cggtggtatt tatagttatg
     5341 ctcaagcagg atttggcgat tttgtaggat ttatcagtgc ttggggatat tggttctcag
     5401 cgtttttagg caatgttgcc tatgcaacac tattgatgtc agcagtaggt aactttttcc
     5461 cgatttttaa aggaggcaac acattaccaa gtgttattgt cgcctcgtta ctactctggg
     5521 gtgtccattt cttgatttta aaaggcgttg aaacagcagc atttatcaat agtattgtta
     5581 ctgttgcaaa gttaataccg attttacttg taatcatatg catgataatt gcattcaatt
     5641 ttgacacttt taaaacaggc tttttcagta tgacgtcaga gggtgtattg ccatttagtt
     5701 gggcgagcac aatgagccaa gttaaaagta cgatgctagt gacagtttgg gtgtttatcg
     5761 gtatcgaagg tgcagtaatt ttttctagta gagctaaaaa taaaaaagat gtaggtagtg
     5821 ccacggttat aggacttata tcagttttaa ttatctattt cttattaact gtattagctc
     5881 aaggcgtgat tttgcaaaat catatttcgc aattagattc gccaagtatg gcacaggtgc
     5941 ttgcaactat tgtaggtggt tggggatcta cacttgtaaa tattggttta attatttcgg
     6001 tactaggtgc atggttagga tggacactgc ttgctggtga attacctttc attgttgcaa
     6061 aagatggatt atttccaaaa tggtttgcta aagaaaataa aaatggagca cctgtaaatg
     6121 cactgcttat taccaatata ttagtacaat tatttttaat aagtatgcta tttacacaga
     6181 gtgcgtatca atttgcattt tcactagcat caagtgctat tttataccct tacatgttca
     6241 gtgcatttta ccaagttaaa tacactttag agcatcgaca gcaagcaact actaaacaat
     6301 ggacgattgg tatcatagcc tcaatttatg ctatatggct tatatatgca gcaggtatca
     6361 attacttatt attgacgatg ttactttata ttccagctct tcttgtttat acaatcgttc
     6421 aaaagaataa tcagacacgt ttgattaaat cagactatat tctttttatg attattatcg
     6481 tacttgcagt tatcgggtta attaagttat tgatgggaac gataaatgtt ttttaaaagg
     6541 agcgacaaaa atatgaaaga gaaaattgtc attgcattag gcggtaatgc gatacagaca
     6601 acagaagcaa cagctgaagc acaacaaaca gctattagat gtgcgatgca aaaccttaaa
     6661 cctttatttg attcaccagc gcgtattgtc atttcacatg gtaatggtcc acaaattgga
     6721 agtttattaa tccaacaagc taaatcgaac agtgacacaa cgccggcaat gccattggat
     6781 acttgtggtg caatgtcaca gggtatgata ggctattggt tggaaactga aatcaatcgc
     6841 attttaactg aaatgaatag tgatagaact gtaggcacaa tcgttacacg tgtggaagta
     6901 gataaagatg atccacgatt tgataaccca actaaaccaa ttggtccttt ttatacgaaa
     6961 gaagaagttg aagaattaca aaaagaacag ccagactcag tctttaaaga agatgcagga
     7021 cgtggttata gaaaagtagt tgcgtcacca ctacctcaat ctatactaga acaccagtta
     7081 attcgaactt tagcagacgg taaaaatatt gtcattgcat gcggtggtgg cggtattcca
     7141 gttataaaaa aagaaaatac ctatgaaggt gttgaagcgg ttatagataa agattttgct
     7201 agtgagaaat tagcaacgct gattgaagca gataccttaa tgattcttac gaatgtagaa
     7261 aatgtattta ttaactttaa tgaacctaat caacaacaaa tcgatgatat tgatgtagca
     7321 acactgaaaa aatacgcggc acaaggtaag tttgtggaag gatcgatgtt gccaaaaata
     7381 gaagctgcga tacgatttgt tgaaagtggg gaaaacaaaa aagttatcat taccaattta
     7441 gagcaggcat acgaagcttt gattggtaat aaaggtacac acattcacat gtagcacttt
     7501 atcacgcgac aaaacattaa atatgtttct ccgttgattc aaatgaaaaa gttgtctgct
     7561 gacactttgc aaggtttgaa ggagtttaac ttatgacaga aaactttatt ttgggtagaa
     7621 ataataaatt agaacatgaa ctaaaggcat tagcagatta cattaatata ccatatagta
     7681 tattacaacc atatcaaagt gaatgttttg tcagacatta tacgaaaggc caagttattt
     7741 atttttcgcc acaagaaagt agcaatattt actttttaat tgaaggtaac attattagag
     7801 aacattacaa tcaaaatgga gatgtatatc gttattttaa taaagagcaa gtattatttc
     7861 caatcagtaa cttatttcat ccgaaagagg ttaacgaatt gtgtacagca ttaaccgatt
     7921 gtacagttct tggattgcct agagaattga tggccttttt gtgcaaagct aatgatgata
     7981 tatttttgac actttttgca ttaataaatg ataatgagca gcaacacatg aactataaca
     8041 tggcattaac aagtaaattt gctaaagatc gaattatcaa attgatatgc catctatgtc
     8101 agacagtagg atacgatcaa gatgaatttt atgaaatcaa acagttttta actattcaac
     8161 tcatgagtga tatggctggg atttcccggg aaacagctgg tcatattatt catgaactta
     8221 aagatgaaaa acttgttgtt aaagatcata aaaattggtt agtaagcaaa catttattca
     8281 atgatgtatg tgtttaatat acaatgtaaa atgaataagt tgaacatgag gtctaacgta
     8341 catttatacg ttaggccttt tttgctagca tgatgaataa tttaaaatgt tagttaaatt
     8401 tgattgttga aattacagta aaatttaagg tgatgaaaaa tttagaactt ctaagttttt
     8461 gaaaagtaaa aaatttgtaa tagtgtaaaa atagtatatt gatttttgct agttaacaga
     8521 aaattttaag ttatataaat aggaagaaaa caaattttac gtaatttttt tcgaaaagca
     8581 attgatataa ttcttatttc attatacaat ttagactaat ctagaaattg aaatggagta
     8641 atatttttga aaaaaagaat tgattatttg tcgaataagc agaataagta ttcgattaga
     8701 cgttttacag taggtaccac atcagtaata gtaggggcaa ctatactatt tgggataggc
     8761 aatcatcaag cacaagcttc agaacaatcg aacgatacaa cgcaatcttc gaaaaataat
     8821 gcaagtgcag attccgaaaa aaacaatatg atagaaacac ctcaattaaa tacaacggct
     8881 aatgatacat ctgatattag tgcaaacaca aacagtgcga atgtagatag cacaacaaaa
     8941 ccaatgtcta cacaaacgag caataccact acaacagagc cagcttcaac aaatgaaaca
     9001 cctcaaccga cggcaattaa aaatcaagca actgctgcaa aaatgcaaga tcaaactgtt
     9061 cctcaagaag caaattctca agtagataat aaaacaacga atgatgctaa tagcatagca
     9121 acaaacagtg agcttaaaaa ttctcaaaca ttagatttac cacaatcatc accacaaacg
     9181 atttccaatg cgcaaggaac tagtaaacca agtgttagaa cgagagctgt acgtagttta
     9241 gctgttgctg aaccggtagt aaatgctgct gatgctaaag gtacaaatgt aaatgataaa
     9301 gttacggcaa gtaatttcaa gttagaaaag actacatttg accctaatca aagtggtaac
     9361 acatttatgg cggcaaattt tacagtgaca gataaagtga aatcagggga ttattttaca
     9421 gcgaagttac cagatagttt aactggtaat ggagacgtgg attattctaa ttcaaataat
     9481 acgatgccaa ttgcagacat taaaagtacg aatggcgatg ttgtagctaa agcaacatat
     9541 gatatcttga ctaagacgta tacatttgtc tttacagatt atgtaaataa taaagaaaat
     9601 attaacggac aattttcatt acctttattt acagaccgag caaaggcacc taaatcagga
     9661 acatatgatg cgaatattaa tattgcggat gaaatgttta ataataaaat tacttataac
     9721 tatagttcgc caattgcagg aattgataaa ccaaatggcg cgaacatttc ttctcaaatt
     9781 attggtgtag atacagcttc aggtcaaaac acatacaagc aaacagtatt tgttaaccct
     9841 aagcaacgag ttttaggtaa tacgtgggtg tatattaaag gctaccaaga taaaatcgaa
     9901 gaaagtagcg gtaaagtaag tgctacagat acaaaactga gaatttttga agtgaatgat
     9961 acatctaaat tatcagatag ctactatgca gatccaaatg actctaacct taaagaagta
    10021 acagaccaat ttaaaaatag aatctattat gagcatccaa atgtagctag tattaaattt
    10081 ggtgatatta ctaaaacata tgtagtatta gtagaagggc attacgacaa tacaggtaag
    10141 aacttaaaaa ctcaggttat tcaagaaaat gttgatcctg taacaaatag agactacagt
    10201 attttcggtt ggaataatga gaatgttgta cgttatggtg gtggaagtgc tgatggtgat
    10261 tcagcagtaa atccgaaaga cccaactcca gggccgccgg ttgacccaga accaagtcca
    10321 gacccagaac cagaaccaac gccagatcca gaaccaagtc cagacccaga accggaacca
    10381 agcccagacc cggatccgga ttcggattca gacagtgact caggctcaga cagcgactca
    10441 ggttcagata gcgactcaga atcagatagc gattcggatt cagacagtga ttcagattca
    10501 gacagcgact cagaatcaga tagcgattca gaatcagata gcgactcaga ttcagatagc
    10561 gattcagatt cagatagcga ttcagattca gatagcgatt cggattcaga tagcgattca
    10621 gattcagata gcgattcaga ttcagatagc gattcggatt cagacagtga ttcagattca
    10681 gacagcgact cagaatcaga tagcgactca gaatcagata gtgagtcaga ttcagacagt
    10741 gactcggact cagacagtga ttcagactca gatagcgatt cagactcaga tagcgattca
    10801 gactcagaca gcgattcaga ttcagacagc gactcagatt cagacagcga ctcagactca
    10861 gatagcgact cagactcaga cagcgactca gattcagata gcgattcaga ctcagacagc
    10921 gactcagact cagacagcga ctcagactca gatagcgact cagattcaga tagcgattca
    10981 gactcagaca gcgactcaga ttcagatagc gattcggact cagacagcga ttcagattca
    11041 gacagcgact cagactcgga tagcgattca gattcagata gcgattcgga ttcagacagt
    11101 gattcagatt cagacagcga ctcagactcg gatagcgact cagactcaga cagcgattca
    11161 gactcggata gcgactcgga ttcagatagc gactcagact cagatagtga ctccgattca
    11221 agagttacac caccaaataa tgaacagaaa gcaccatcaa atcctaaagg tgaagtaaac
    11281 cattctaata aggtatcaaa acaacacaaa actgatgctt taccagaaac aggagataag
    11341 agcgaaaaca caaatgcaac tttatttggt gcaatgatgg cattattagg atcattacta
    11401 ttgtttagaa aacgcaagca agatcataaa gaaaaagcgt aaatactttt ttaggccgaa
    11461 tacatttgta ttcggttttt ttgttgaaaa tgattttaaa gtgaattgat taagcgtaaa
    11521 atgttgataa agtagaatta gaaaggggtc atgacgtatg gcttatattt cattaaacta
    11581 tcattcacca acaattggta tgcatcaaaa tttgacagtc attttaccgg aagatcaaag
    11641 cttctttaat agcgatacaa ctgttaaacc attaaaaact ttaatgttgt tacatggatt
    11701 atcaagtgat gaaacgacat atatgagata tacaagcata gaaaggtatg cgaatgaaca
    11761 caaattagct gtgattatgc ccaatgtgga tcatagcgca tatgctaaca tggcatatgg
    11821 tcatagctat tatgattata ttttggaagt gtatgattat gttcatcaaa tatttccact
    11881 ttccaaaaag cgtgatgaca attttatagc aggtcactct atgggaggat atggcacaat
    11941 taaatttgca ttaacacaag gggataaatt tgccaaagct gtaccattat ctgctgtgtt
    12001 tgaagcgcaa aatttaatgg atctagagtg gaatgatttt tcaaaagagg ccataattgg
    12061 caatctttca agtgttaaag gaactgaaca tgatccgtat tacttgctag acaaagctgt
    12121 agctgaagat aaacaaattc caaaattgct cattatgtgt ggtaaacaag actttttata
    12181 tcaagacaac ttagatttta tcgattattt atcacgcata aatgttcctt atcaatttga
    12241 agatggacca ggagatcatg attatgcata ttgggatcaa gcgattaagc gtgctataac
    12301 atggatggtg aatgattaat tatttcttgg aaaatatgtg gctgcattaa atacacagag
    12361 tgagagatac aaactattta cgcacgacta acatttctaa gtgtttaaat tatttttgta
    12421 ttaatatgat tggcgcaatt tgctgataca caaaaatgtt tctcgtgaaa cttagattta
    12481 gcttatagtt ttatcatcat ttgtatgact tacattataa attttattat aatgaggtta
    12541 acgctttgaa aggagtcatc atcatgtcga ccaataaaaa cgattatgag catatgttgt
    12601 tttattttgc atataaaacc tttattacta ccgctgatga aattatagag aagtatggta
    12661 tgagtcgtca gcatcatcgt tttttgtttt ttatcaataa attacctggt attactatta
    12721 aatcattact agaaatatta gaaatttcta aacaaggatc acatgcaaca cttcaaaaat
    12781 taaaagagca aggtctcatt attgaaaaag ttttagagac tgatcgacgt gtcaaaaaat
    12841 tatattcgac ggataaaggc gatcaactca ttgctgaatt gaacaaggcg caagatgaat
    12901 tattgcaaaa tatatatcaa caagtcggtt cggattggta tgatgtgatg gaagcattgg
    12961 ctaaagggcg acctggcttt gattttatta agcatttgaa agatgaaaaa gaaagctagc
    13021 atcagaaatg ttaaaaatct tcgcattctt aaatttaaaa aatatgtcaa aaagtgtata
    13081 ataaaaacat ataatttaat tgaactcagt ttcaacacat cttagaaagg agtttgaatg
    13141 atgaaaaaat tagcagttat tttaacatta gttggcggtt tatacttcgc atttaaaaaa
    13201 taccaagaac gtgttaacca agcacctaac attgagtact aaattaaacc ataaaaaatt
    13261 cccgaacacc ttgttatagt gctcgggaat ttttttatgc tttacttgaa tatatcaaat
    13321 attatttttg cgctttctgt attttcgata ttaccactaa atgattctga tctaggtccg
    13381 taagcgtagg tattaacatc ctcgcctgta tgtccatcgg aagtccaccc tgtataagat
    13441 ttatcattta ctggcttctg aatagcgtgt tgtagggctt ttgtttgcgt ttctacttct
    13501 gcggattttt cgtctttttc ttttttaagt agtcttttta gctttttatt ctctttttta
    13561 acctttttca tatcatcttg tgaaaattca aatccataac cttcattaat aactttttca
    13621 gggtcttcac ctttagccat tttttctgtc atatatgatc cagagtgttt catagattta
    13681 atcggttgag gattccattc gtatccttta tctttaccaa ttgttagacc accagtagag
    13741 tgatctgctg ttgcaacgac aagtgtatct ttatgtttct tagcatattg aatggcgtca
    13801 tcgaatgctt tttcaaaacc ttccatttca gacataacgc ctgtaatatc gttggaatgc
    13861 gctgatttat ctatagaagc accttcgacc attaaaaaga atcctttttt attgcgctca
    13921 agcttactaa gtgcactttg ttgcatatca gctaatgatg gttcgtcttt agaagcatct
    13981 attgcaagtg gcatattttt atctgcaaac aaaccaagaa ctttatcttt atcagatttt
    14041 gataactcct tactgttcgt ggcaaggtcg taaccatctt ttttgaattt tttatctaaa
    14101 ttgccattac ttttaccgaa atatttagcg ccgccgccta ataaaacatc aactttatgc
    14161 tttccgttga ttttatcttt ataaaattgt ttagcgattt cgtttttatc atctctagaa
    14221 gtcacgtgtg cagcatatgc tgctggtgtt gcatctgtta attcagctgt tgaaacaaga
    14281 ccagtcgact tacctttttc ttttgcacgt tcaagcaccg tctttacttt ctgcttgtta
    14341 ctgtcaacac cgatggcacc attatatgtc ttatgaccag aactaaaggc tgttccgcca
    14401 gctgcagaat cagtaatatt ctgttttggg tcatttgaat atgtacgatt tgtgcctttt
    14461 aaatatgaat caaaagcagt aggggtcatt tctttagcat gcggatcatt tttataataa
    14521 cgataagctg tgttaaatga tggacccatg ccatcgccaa ctaaaaagat aacatttttt
    14581 ggatttttag tattaccaac cgcgaaactt tcatctttag aacttttatc ggattgcgca
    14641 attgcaggtg tgacagaact aaaaaccgtt gacacgataa taaggttagc aactgcaaat
    14701 tttgtggctt ttttaactga taacataaga catcctcctg agtatatgac tatgtcttca
    14761 gtgtaaaaga ggaattttga gcaattatgt agttttagtt aaaaatatgt aaacagagtg
    14821 atttagaata acaaaaaatg aatatatatg acaatttgtt atagaaagcg ttagaataga
    14881 agcgtgtgaa aatatagaat taaatataat ttgaggtgga aaaatgatac tagtaatgtt
    14941 atctccatta ttaatcatat tctttatagt gttgtctatt ttagaagagc gtaaacgtac
    15001 gaagaaaaag caactcgaga aagaaaaagt aaatacacta aatcaaaata caaatgacac
    15061 ggaaagttca aatcaagagc cgtcattgca gcaggataaa gaacaaaaag ataacaaagg
    15121 ataattcaat tgaaggaaga agattataga tgaaaatatt aattgttgaa gatgattttg
    15181 ttatagcaga gagtttagca tctgaactta aaaaatggaa ttacggtgtt attgtcgttg
    15241 aacaatttga tgatatactg tctatcttta accaaaatca acctcagctt gtattgctag
    15301 atattaattt gccaacgtta aatggttttc attggtgtca agaaatccga aaaacatcta
    15361 atgtgccaat tatatttatt agttcccgta ttgataatat ggaccaaatt atggcaatac
    15421 aaatgggggg agatgatttt atcgaaaagc catttaactt gtcattaacg attgccaaaa
    15481 ttcaagcatt attgagacga acttatgact tgtcagtagc taatgattca ttgacggtta
    15541 aaggttgtac attaatatta gatgaagcaa aagtcgtgta tcaagaacaa aacatacagc
    15601 tatctttgac tgaattacaa atattaaagt tattatttca aaatgaagat aaatatgtaa
    15661 gtagaactgc tttaattgaa aaatgttggg aatcagaaaa cttcatagat gataacacat
    15721 tagctgttaa catgacgcgc ctgcgtaaaa aattaaatac tattggcgtt aatgatttta
    15781 tcattacaaa gaaaaatgtc ggatataaag tatagggtga atgcaatgac ctttcttaaa
    15841 agtattactc aggaaatagc aatagtcata gttatttttg ctttgtttgg cttaatgttt
    15901 tacctgtatc atttgccatt agaagcatat ttactagcac ttggcgttat tttattatta
    15961 ttactcatat tcataggtat taaatattta agttttgtaa aaactataag ccaacaacaa
    16021 caaattgaaa acttagaaaa tgcgttgtat cagcttaaaa atgaacaaat tgaatataaa
    16081 aatgatgtag agagctactt tttaacatgg gtacatcaaa tgaaaacacc cattactgca
    16141 gcacaactgt tacttgaaag agatgagcct aatgttgtta atcgtgttcg tcaagaggtt
    16201 attcaaattg ataactatac aagtttagca cttagttatt taaagttatt aaatgaaact
    16261 tctgatattt ctgtcactaa aatttcgatt aataatatca ttcgcccaat tattatgaaa
    16321 tattcaatac agtttattga tcaaaaaaca aaaatccatt atgaaccttg tcatcacgaa
    16381 gtattaactg acgttagatg gacctcttta atgatagaac aattaataaa taatgcactt
    16441 aagtatgcga gaggtaaaga tatatggatt gaatttgatg agcaatccaa tcaattacac
    16501 gtaaaagata atggtatcgg tattagtgaa gcggacttgc ctaaaatatt tgataagggc
    16561 tattcaggtt ataatggcca gcgccaaagt aactcaagtg ggattggttt atttatcgta
    16621 aaacaaattt caacacacac aaaccatcct gtttcagtcg tatctaaaca aaatgagggt
    16681 acaacattta cgattcaatt tccagatgaa taaaaacttt caatattgta agtatactag
    16741 taacattttt ttactaattt aaatgttatt agtatttttt tgttttaata tagaactaac
    16801 aaagaaatga ggtgcatgcc atgttgctag aagtgaaaca tgtaaaaaag gtttatggta
    16861 aaggtttgaa tgctacgaca gcacttaatc aaatgaattt atcagttgga gctggtgaat
    16921 ttgttgcaat tatgggtgag tctgggtcag ggaagtctac actactaaat ttaattgctt
    16981 cttttgatgg actaactgaa ggtgacatta ttgtggatgg cgcacattta aataatatga
    17041 aaaataaaag taaagcattg tatcgtcaac aaatggtagg ttttgttttt caagatttta
    17101 atcttttacc aacaatgacg aataaagaaa atataatgat gccattaatt ttagctggtg
    17161 ctaaacgaaa agatatagaa caaagggtac atcagttggc agtacaatta catttagagg
    17221 gattcttaaa caagtatcct tctgaaatct ctgggggtca gaagcaacgc attgccattg
    17281 cacgtgcatt agttactaag ccgacgattt tactagccga tgaacctaca ggtgcacttg
    17341 attcaaaaac atcaaaggca ttgatgatgt tatttcaaga gattcatcaa ttggaacaga
    17401 caattttaat ggtaactcat tcaaatatcg atgcgtctta tgcagagcga gtcattttta
    17461 ttaaagatgg gcgtctatat catgaaatat atcgtggtga agaaagtcaa ttagcttttc
    17521 aacaacgaat aacagatagc ttagcacttg tgaatggagg aagtgtcaat atatgaagtt
    17581 aagattgtta tggcacatag tgcgacgtca atttattacg cagcgacttg taatcattcc
    17641 attcatttta gcggtaagtg tactattcat gattgaatat acgcttgtgt caattgggtt
    17701 aaatagctac ataaaacaga agaatgactt cctagtacca tttattatca tagctaattt
    17761 ttttatggcg cttttaactt ttatttttat tttctatgca aatcacttta tgatgtcaca
    17821 aagacgaaaa gagtttagca tttttatgac attgggcatg accaagaaaa gtatgcgttt
    17881 aattgtagtg atggaaacta tcttacaatt tgtgataatt tcagtcgtta gtattgccgg
    17941 cggatactta cttggtgcga tatttttctt gtttatacag aaaataatgg gcagtgaagt
    18001 tgcgacgtta aggtattatc catttgactc tgtagcgatg tttattactt tgattatcat
    18061 tgctgtatta atgggcatgc tacttatatt caacttgttt agtattaatt ttcaacggcc
    18121 gataacttat caacatcgtt ccgattctag tgtcatatca cgatggttgc gttacgtttt
    18181 aattgttata ggaagcgcag cactatattt aggttacttt attgcattac aacaagatac
    18241 gacgtttggt gcctttttta aaatatggat tgtcatagga ttagttatta tcggtactta
    18301 tgcatttttt gtaggtataa gtgaaataat tattagtata ttgcagcagg tatcaaaagt
    18361 ttactatcat ccacggtatt tttttgtggt agttgggatg cgtgtacgtc ttaaaatgaa
    18421 tgcagtcagt cttgcaacaa tcactttgct gtgtacattt ttgattgtaa cgctcacaat
    18481 gacattaaca acctatcgtg atatgaatca taccattacg aaattgatta cgaatgatta
    18541 tgatttgtca tttagcgaca attctaagtc acaaatagaa cgtcaacaaa caattgagaa
    18601 tattaaacgt gatatacagg gttcggttaa tgcaaaagac ttcaaagtat atgaaacgac
    18661 attatttaga gcttctttag aaaagaatcg tgcttattac aagttaaaac aggctagtga
    18721 tgatattcca atagacttca ttggtaatga aggcgcgata ttttcaagac aatcagtaat
    18781 gattacagct tttactgcac aagattataa tcgatatcac caaaacaaat tacacttaga
    18841 caatcaaagt ataggtatga ttacgaatgt acctattttt aaaaagcagt ctaaggtcgg
    18901 tcttaataat gaagtcttta aagtgaaaca acttgacgca catgcgttaa atttgatgat
    18961 gattcaagat agtatggttt taattgttaa agataacaat caattacaaa aagtaaaagg
    19021 attttatgca catgaacaaa agaattcgac aatatcgata aactttaatg tatttggaaa
    19081 gacgaaatta acaacatcac aaatacaaaa gctatcgaaa aaatacgatg cgtcaataaa
    19141 ttctaaatca gaaatgctaa tggtttggga tcgtttgaca ggtggactaa tatttgtagg
    19201 tggcgtagta tcaattgtac ttgtcattgg aatatttcta atgatgtatt ataaacaagt
    19261 ctcagaagcc tatgcaaatc agcacaatta tgacattatg aaaaaacttg gtttagataa
    19321 tggaagaata gcaaagataa cacgaaatca aatgactttc ttgttcgcaa taccaataac
    19381 agtagcactg attcacacat taatttctag taacattgta tatacgttac taaatatgat
    19441 aggtattaat aaccatcata tatttttaac aagttacgta ctagctgtca ttataatttc
    19501 gtttctatat atggcgatgt acaaaataac ttcctatatt tatgctaaag tt
//
LOCUS       DALPQQ010000041        19455 bp    DNA     linear   BCT 22-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus strain K18-6-464
            SAMD00233528-rid16434743.denovo.041, whole genome shotgun sequence.
ACCESSION   DALPQQ010000041 DALPQQ010000000
VERSION     DALPQQ010000041.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMD00233528
            Sequence Read Archive: DRR236061
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 19455)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 19455)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001543423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001543423.1
            Genome Coverage       :: 77x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/22/2022 17:09:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,811
            CDSs (total)                      :: 2,743
            Genes (coding)                    :: 2,689
            CDSs (with protein)               :: 2,689
            Genes (RNA)                       :: 68
            rRNAs                             :: 2, 4, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 4, 2 (16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 54
            CDSs (without protein)            :: 54
            Pseudo Genes (ambiguous residues) :: 0 of 54
            Pseudo Genes (frameshifted)       :: 27 of 54
            Pseudo Genes (incomplete)         :: 27 of 54
            Pseudo Genes (internal stop)      :: 10 of 54
            Pseudo Genes (multiple problems)  :: 10 of 54
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..19455
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMD00233528-rid16434743.denovo.041"
                     /strain="K18-6-464"
                     /db_xref="taxon:1280"
                     /geo_loc_name="Japan: Niigata"
     gene            complement(182..685)
                     /locus_tag="O7798_001206"
     CDS             complement(182..685)
                     /locus_tag="O7798_001206"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499652.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metallophosphoesterase"
                     /protein_id="HDC2863473.1"
                     /translation="MSKWIIVSDNHTESGVLYQIYEMHPDADVYLHLGDSEFAYDDTE
                     LSLFNRVKGNCDFYPEFENEAVAKYNDVKAFYTHGHLYQVNRTRDLLAEKGLELGCLF
                     AFYGHTHVAKYEYINGVHVINPGSISQSRSSMEETYAEVIIDDQTLHGTINFKNRHHE
                     TISHTTF"
     gene            complement(678..1265)
                     /locus_tag="O7798_001207"
     CDS             complement(678..1265)
                     /locus_tag="O7798_001207"
                     /EC_number="3.6.1.66"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499651.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="XTP/dITP diphosphatase"
                     /protein_id="HDC2863474.1"
                     /translation="MKEIVIASNNQGKINDFKVIFPDYHVIGISELIPDFDVEETGST
                     FEENAILKSEAAAKALNKTVIADDSGLEVFALNGEPGIYSARYAGENKSDEANIEKLL
                     NKLGNTTDRRAQFVCVISMSGPDMETKVFKGTVSGEIADGKYGENGFGYDPIFYVPKL
                     DKTMAQLSKEQKGQISHRRNAINLLQAFLEGDKNV"
     gene            complement(1277..2077)
                     /gene="racE"
                     /locus_tag="O7798_001208"
     CDS             complement(1277..2077)
                     /gene="racE"
                     /locus_tag="O7798_001208"
                     /EC_number="5.1.1.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499650.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate racemase"
                     /protein_id="HDC2863475.1"
                     /translation="MNKPIGVIDSGVGGLTVAKEIMRQLPNETIYYLGDIGRCPYGPR
                     PGEQVKQYTVEIARKLMEFDIKMLVIACNTATAVALEYLQKTLSIPVIGVIEPGARTA
                     IMTTRNQNVLVLGTEGTIKSEAYRTHIKRINPHVEVHGVACPGFVPLVEQMRYSDPTI
                     TSIVIHQTLKRWRNSESDTVILGCTHYPLLYKPIYDYFGGKKTVISSGLETAREVSAL
                     LTFSNEHASYTEHPDHRFFATGDPTHITNIIKEWLNLSVNVERISVND"
     gene            complement(2313..3128)
                     /gene="sdhB"
                     /locus_tag="O7798_001209"
     CDS             complement(2313..3128)
                     /gene="sdhB"
                     /locus_tag="O7798_001209"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499649.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="succinate dehydrogenase iron-sulfur subunit"
                     /protein_id="HDC2863476.1"
                     /translation="MTEQSVKNTPQHETQSKPKQKTVKLIIKRQDTSDSKPYEETFEI
                     PYRENLNVIACLMEIRRNPVNIKGEKTTPVVWDMNCLEEVCGACSMVINGRARQSCSA
                     IVDQLEQPIRLEPMNTFPVIRDLQVDRSRMFDNLKRMKAWIPIDGTYDLGPGPRMPEK
                     KRQTAYELSKCMTCGVCLEVCPNVTENNKFVGAQAISQVRLFNLHPTGSMTKDERLNA
                     LMGTGGLQQCGNSQNCVNACPKGIPLTTSIAAMNRETTFHMFKSFFGSDHEVE"
     gene            complement(3128..4894)
                     /gene="sdhA"
                     /locus_tag="O7798_001210"
     CDS             complement(3128..4894)
                     /gene="sdhA"
                     /locus_tag="O7798_001210"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499648.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="succinate dehydrogenase flavoprotein subunit"
                     /protein_id="HDC2863477.1"
                     /translation="MAEKHLIVVGGGLAGLMSTIKAAEKGAHVDLFSVVPVKRSHSVC
                     AQGGINGAVNTKGEGDSPWIHFDDTVYGGDFLANQPPVKAMTEAAPKIIHLLDRMGVM
                     FNRTNEGLLDFRRFGGTLHHRTAYAGATTGQQLLYALDEQVRAYEVDGLVTKYEGWEF
                     LGIVKGDDDSARGIVAQNMTTAEIETFGSDAVIMATGGPGIIFGKTTNSMINTGSAAS
                     IVYQQGAIYANGEFIQIHPTAIPGDDKLRLMSESARGEGGRIWTYKDGKPWYFLEEKY
                     PDYGNLVPRDIATREIFDVCINQKLGINGENMVYLDLSHKDPHELDVKLGGIIEIYEK
                     FTGDDPRKVPMKIFPAVHYSMGGLYVDYDQMTNIKGLFAAGECDFSQHGGNRLGANSL
                     LSAIYGGTVAGPNAIDYISNIDRSYTDMDESIFEKRKAEEQERFDKLLAMRGTENAYK
                     LHRELGEIMTANVTVVRENEKLLETDKKIVELMKRYEDIDMEDTQTWSNQAVFFTRQL
                     WNMLVLARVITIGAYNRNESRGAHYKPEFPERNDEEWLKTTMASFQGAFEKPQFTYDD
                     VDVSLIPPRKRDYTSKSKGGKK"
     gene            complement(4946..5560)
                     /locus_tag="O7798_001211"
     CDS             complement(4946..5560)
                     /locus_tag="O7798_001211"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499647.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="succinate dehydrogenase cytochrome b558 subunit"
                     /protein_id="HDC2863478.1"
                     /translation="MAQSKNEFYLRRIHSLLGIIPIGAFLVVHLLVNHQATQGAEAFN
                     KASNFMESLPFLIIVEFLFIYIPLLYHGLFGIHIAFTAKENVGHYSIFRNWMFFFQRV
                     SGILTFIFIGIHLWQTRLQKAFYGKEVNYDLMHETLQHPGWAIFYIICIIAVVFHFAN
                     GLWSFLVTWGGLQSPKSQRVFTWVSLIVFLVISYIGVTAIIAFM"
     gene            complement(5884..7665)
                     /gene="uvrC"
                     /locus_tag="O7798_001212"
     CDS             complement(5884..7665)
                     /gene="uvrC"
                     /locus_tag="O7798_001212"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499646.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="excinuclease ABC subunit UvrC"
                     /protein_id="HDC2863479.1"
                     /translation="MEDYKQRIKNKLNVVPMEPGCYLMKDRNDQVIYVGKAKKLRNRL
                     RSYFTGAHDAKTTRLVGEIRRFEFIVTSSETESLLLELNLIKQYQPRYNILLKDDKSY
                     PFIKITKEKYPRLLVTRTVKQGTGKYFGPYPNAYSAQETKKLLDRIYPYRKCDKMPDK
                     LCLYYHIGQCLGPCVYDVDLSKYAQMTKEITDFLNGEDKTILKSLEERMLTASESLDF
                     ERAKEYRDLIQHIQNLTNKQKIMSSDKTIRDVFGYSVDKGWMCIQVFFIRQGNMIKRD
                     TTMIPLQQTEEEEFYTFIGQFYSLNQHILPKEVHVPRNLDKEMIQSVVDTKIVQPARG
                     PKKDMVDLAAHNAKVSLNNKFELISRDESRTIKAIEELGTQMGIQTPIRIEAFDNSNI
                     QGVDPVSAMVTFVDGKPDKKNYRKYKIKTVKGPDDYKSMREVVRRRYSRVLNEGLPLP
                     DLIIVDGGKGHMNGVIDVLQNELGLDIPVAGLQKNDKHQTSELLYGASAEIVPLKKNS
                     QAFYLLHRIQDEVHRFAITFHRQTRQKTGLKSILDDIDGIGNKRKTLLLRSFGSIKKM
                     KEATLEDFKNIGIPENVAKNLHEQLHK"
     gene            7831..7926
                     /locus_tag="O7798_001213"
     CDS             7831..7926
                     /locus_tag="O7798_001213"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499645.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDC2863480.1"
                     /translation="MLDYHLTFIDLLIPPFSSRKQYDDLSFNFLY"
     gene            complement(7989..8303)
                     /gene="trxA"
                     /locus_tag="O7798_001214"
     CDS             complement(7989..8303)
                     /gene="trxA"
                     /locus_tag="O7798_001214"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499644.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin"
                     /protein_id="HDC2863481.1"
                     /translation="MAIVKVTDADFDSKVESGVQLVDFWATWCGPCKMIAPVLEELAA
                     DYEGKADILKLDVDENPSTAAKYEVMSIPTLIVFKDGQPVDKVVGFQPKENLAEVLDK
                     HL"
     gene            complement(8476..10824)
                     /locus_tag="O7798_001215"
     CDS             complement(8476..10824)
                     /locus_tag="O7798_001215"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499643.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="endonuclease MutS2"
                     /protein_id="HDC2863482.1"
                     /translation="MRQKTLDVLEFEKIKSLVANETISDLGLEKVNQMMPATNFETVV
                     FQMEETDEIAQIYNKHRLPSLSGLSKVSAFIHRADIGGVLNVSELNLIKRLIQVQNQF
                     KTFYNQLVEEDEGVKYPILDDKMNQLPVLTDLFQQINETCDTYDLYDNASYELQGIRS
                     KISSTNQRIRQNLDRIVKSQANQKKLSDAIVTVRNERNVIPVKAEYRQDFNGIVHDQS
                     ASGQTLYIEPSSVVEMNNQISRLRHDEAIEKERILTQLTGYVAADKDALLVAEQVMGQ
                     LDFLIAKARYSRSIKGTKPIFKEDRTVYLPKAYHPLLNRETVVANTIEFMEDIETVII
                     TGPNTGGKTVTLKTLGLIIVMAQSGLLIPTLDGSQLSVFKNVYCDIGDEQSIEQSLST
                     FSSHMTNIVEILKHADKHSLVLFDELGAGTDPSEGAALAMSILDHVRKIGSLVMATTH
                     YPELKAYSYNREGVMNASVEFDVDTLSPTYKLLMGVPGRSNAFDISKKLGLSLNIINK
                     AKTMIGTDEKEINEMIESLERNYKRVETQRLELDRLVKEAEQVHDDLSKQYQQFQNYE
                     KSLIEEAKEKANQKIKAATKEADDIIKDLRQLREQKGADVKEHELIDKKKRLDDHYEA
                     KSIKQNVQKQKYDKIVAGDEVKVLSYGQKGEVLEIVNDEEAIVQMGIIKMKLPIEDLE
                     KKQKEKVKPTKMVTRQNRQTIKTELDLRGYRYEDALIELDQYLDQAVLSNYEQVYIIH
                     GKGTGALQKGVQQHLKKHKSVSDFRGGMPSEGGFGVTVATLK"
     gene            complement(10834..12546)
                     /gene="polX"
                     /locus_tag="O7798_001216"
     CDS             complement(10834..12546)
                     /gene="polX"
                     /locus_tag="O7798_001216"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499642.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase/3'-5' exonuclease PolX"
                     /protein_id="HDC2863483.1"
                     /translation="MTKKDVIKLLEQIATYMELKGENTFKISAYRKAAQSLELDERPL
                     DEISDVTELKGIGKGVAEVINDYRETGESQYLQQLQEEVPEGLIPLLKIQGLGSKKIA
                     KLYKELNIVDKASLQVACENGKVSELSGFAKKTEQNILEAVKQLGAKKDRYPIDQMRR
                     LNQEIIDYIDTLNYIDQYSSAGSFRRFKEMSKDLDFIISTDNPKAVQQQLLNIPNKVK
                     EVAVGNTKVSLELAYDDETIGVDFRLIEPSAFYHTLQHFTGSKEHNIRIRQLAKARDE
                     KVSEYGIEQADGTLIQYDSEAKIYEHFNVNFIPPAMREDGSEFDKDLSNIITIDDING
                     DIHMHTTYSDGAFSIRDMVEANIAKGYKFMVITDHSQSLRVANGLQVERLLRQNEEIK
                     ALDKEYSEIDIYSGTEMDILPDGSLDYDDEILAQLDYVIGAIHQSFNQSEEQIMERLA
                     NACRNPYVRHIAHPTGRIIGRRDGYKPNIEQLMALAEETNTVLEINANPHRLDLSADI
                     VRKYPNVKLTINTDAHHTNHLDFMNYGVATAQKGFVTKDRVINALSREAFKDFIENNT
                     KLKK"
     gene            complement(12619..13140)
                     /locus_tag="O7798_001217"
     CDS             complement(12619..13140)
                     /locus_tag="O7798_001217"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499641.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CvpA family protein"
                     /protein_id="HDC2863484.1"
                     /translation="MVIDFIIIIFFVYFVIVGFRRGFWLSMIHLSATIVSLWIASQFY
                     KSIVERLIVFIPYPKTTAFNTTFAFHFNHLQNRFEAIVAFLMITLFCKFILYLIIVTF
                     DKIIAYQNIHIFSRAMGMIVGVFMTIIVLHFTLYLLALYPNEALQHQLKISIVSHSLI
                     FHIPYLSAFTINL"
     gene            complement(13141..13407)
                     /gene="zapA"
                     /locus_tag="O7798_001218"
     CDS             complement(13141..13407)
                     /gene="zapA"
                     /locus_tag="O7798_001218"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000046705.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein ZapA"
                     /protein_id="HDC2863485.1"
                     /translation="MTQFKNKVNVSINDQLFTIVGEDNPEHIRYVAHLVDDKIKELGY
                     KAAGLDTSRKAILTAVNIMHEKVLLEEENRRLKQQIHKLQQREQ"
     gene            13777..14715
                     /locus_tag="O7798_001219"
     CDS             13777..14715
                     /locus_tag="O7798_001219"
                     /EC_number="3.1.26.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499639.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease HIII"
                     /protein_id="HDC2863486.1"
                     /translation="MANIVFKLSDKDITTLMSRISFDTENLPQGMKARAKYQNTTVNI
                     YQSGKVMFQGNHAEAVSEELLPQHSQLNTNKTKKKNMANSFLEQTLMYDQFNCIGSDE
                     AGSGDYFGPLTVCAAFVTKEHVPILKTLGVDDSKKLTDTKIVELAEQLVTFIPHSLLT
                     LHNEKYNIQQAKGWTQVKMKAALHNEAIKNVLEKIDSSQLDYIVIDQFAKREVYSHYA
                     LSDIPLPKKTKFETKGESKSLAIAVASIISRYAFVTYMDQISKNINMTIPKGAGAKVD
                     VIAAKIIKKYGLSRLDTISKKHFKNREKAQKILKPL"
     gene            complement(14886..17288)
                     /locus_tag="O7798_001220"
     CDS             complement(14886..17288)
                     /locus_tag="O7798_001220"
                     /EC_number="6.1.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499638.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phenylalanine--tRNA ligase subunit beta"
                     /protein_id="HDC2863487.1"
                     /translation="MLISNEWLKEYVTIDDSVSNLAERITRTGIEVDDLIDYTKDIKN
                     LVVGFVKSKEKHPDADKLNVCQVDIGEDEPVQIVCGAPNVDAGQYVIVAKVGGRLPGG
                     IKIKRAKLRGERSEGMICSLQEIGISSNYIPKSFESGIYVFSEAQVPGTDALQALYLD
                     DQVMEFDLTPNRADALSMIGTAYEVAALYNTKMTKPETTSNELDLSANDELTVTIENE
                     DKVPYYSARVVHDVTIEPSPIWMQARLIKAGIRPINNVVDISNYVLLEYGQPLHMFDQ
                     DAIGSQQIVVRQANEGEKMTTLDDTERELLTSDIVITNGQTPIALAGVMGGDFSEVKE
                     QTSNIVIEGAIFDPVSIRHTSRRLNLRSESSSRFEKGIATEFVDEAVDRACYLLQTYA
                     NGKVLKDRVSSGELGAFITPIDITADKINRTIGFDLSQNDIVTIFNQLGFDTEINDDV
                     ITVLVPSRRKDITIKEDLIEEVARIYGYDDIPSTLPVFDKVTSGQLTDRQYKTRMVKE
                     VLEGAGLDQAITYSLVSKEDATAFSMQQRQTIDLLMPMSEAHASLRQSLLPHLIEAAS
                     YNVARKNKDVKLFEIGNVFFANGEGELPDQVEYLSGILTGDYVVNQWQGKKETVDFYL
                     AKGVVDRVSEKLNLEFSYRRADIDGLHPGRTAEILLENKVVGFIGELHPILAADNDLK
                     RTYVFELNFDALMAVSVGYINYQPIPRFPGMSRDIALEVDQNIPAADLLSTIHAHGGN
                     ILKDTLVFDVYQGEHLEKGKKSIAIRLNYLDTEETLTDERVSKVQAEIEAALIEQGAV
                     IR"
     gene            complement(17288..18346)
                     /gene="pheS"
                     /locus_tag="O7798_001221"
     CDS             complement(17288..18346)
                     /gene="pheS"
                     /locus_tag="O7798_001221"
                     /EC_number="6.1.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499637.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phenylalanine--tRNA ligase subunit alpha"
                     /protein_id="HDC2863488.1"
                     /translation="MSEQQTMSELKQQALVDINEANDERALQEVKVKYLGKKGSVSGL
                     MKLMKDLPNEDKPAFGQKVNELRQTIQNELDERQQMLVKEKLNKQLAEETIDVSLPGR
                     HIEIGSKHPLTRTIEEIEDLFLGLGYEIVNGYEVEQDHYNFEMLNLPKSHPARDMQDS
                     FYITDEILLRTHTSPVQARTMESRHGQGPVKIICPGKVYRRDSDDATHSHQFTQIEGL
                     VVDKNVKMSDLKGTLELLAKKLFGADREIRLRPSYFPFTEPSVEVDVSCFKCKGKGCN
                     VCKHTGWIEILGAGMVHPNVLEMAGFDSSEYSGFAFGMGPDRIAMLKYGIEDIRHFYT
                     NDVRFLDQFKAVEDRGDM"
     gene            complement(18727..>19455)
                     /locus_tag="O7798_001222"
     CDS             complement(18727..>19455)
                     /locus_tag="O7798_001222"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499636.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA methyltransferase"
                     /protein_id="HDC2863489.1"
                     /translation="TSAQNNRIKQANKLKKKRERDKTGLALIEGVHLIEEAYQSGIVI
                     TQLFAIEPARLDQQIIAYAQEVFEINMKVAESLSGTVTPQGFFAIIEKPHYDISKAQQ
                     VLLIDRVQDPGNLGTLIRTADAAGMDAVIMEKGTTDPYQDKVLRASQGSVFHLPVMTQ
                     DLDTFITQFNGPVYGTALENAVAYKEVTSSDSFALLLGNEGEGVNPELLAHTTQNLII
                     PIYGKAESLNVAIAGSILLYHLKG"
BASE COUNT         6007 a         3764 c         2740 g         6944 t
ORIGIN      
        1 caaccatata gggttatcaa caatcacatt ctccaaaatt acaattcttt tcataacata
       61 aatgtgttat tcattccaat tatcttataa aattgtcaga aatactttta aacaaacatt
      121 catgacacga cctcctagtt aaatcagtct ataaactaaa aaaagccata gctacttcta
      181 tttaaaaagt agtatgactg attgtttcgt gatgtcgatt tttgaaattg atggtgccat
      241 gtaaagtttg atcatcaata ataacttcag catatgtttc ttccattgaa cttctagatt
      301 gagatatact tccaggatta ataacatgaa caccattaat atactcatat tttgccacat
      361 gtgtatgtcc ataaaatgca aacaaacaac ctaattcaag tcctttttca gctaataaat
      421 ctcttgttcg attgacttga tataaatgtc catgagtata aaatgctttc acgtcattat
      481 attttgcgac cgcttcattt tcaaattctg ggtaaaaatc acaattgcct tttactctat
      541 taaataagct aagttccgta tcatcatacg cgaattctga atctcctaaa tgtaaatata
      601 catctgcatc tgggtgcatt tcataaattt gatataaaac gcctgattca gtatggttat
      661 cactcacaat aatccattta gacattttta tcaccttcaa gaaaagcttg aagtaaatta
      721 atcgcatttc gtctatgact aatttgccct ttttgttctt ttgaaagttg agccatggtt
      781 ttatctaatt tcggtacata aaatatcgga tcatatccga aaccattttc gccatatttt
      841 ccatctgcaa tttcacctga aacagtacct ttaaatactt ttgtttccat atcagggcca
      901 ctcatactta tgacacaaac aaattgcgca cgacgatcag ttgtattacc aagcttattt
      961 aataattttt caatatttgc ttcatcgctt ttattttcac cagcataacg tgcagagtat
     1021 atacctggct caccatttaa tgcaaaaact tctagtccac tgtcatcagc tatgaccgtt
     1081 ttattcaatg cttttgcagc agcttctgat tttaatatag cattttcttc aaatgttgat
     1141 cctgtttctt ccacatcaaa atctggtatt agttctgaaa tacctattac gtggtaatct
     1201 ggaaatatta ctttaaagtc atttattttc ccttgattat tcgatgcaat aacaatctct
     1261 ttcattaaaa atcctcctag tcattcactg atatacgttc cacattgaca gataaattta
     1321 accactcttt gataatgtta gtaatgtgag taggatcacc tgttgcaaaa aatcgatgat
     1381 ctggatgttc agtataactt gcatgttcat tactaaatgt tagcaatgca ctaacttcac
     1441 gagccgtttc taatccagac gaaatcactg tctttttacc accaaaataa tcatagatag
     1501 gtttatagag caatggatag tgggtacatc ctaaaatgac agtatcagac tcactattac
     1561 gccaacgttt cagtgtttga tgaatgacaa tgcttgtaat tgttggatca ctatatctca
     1621 tttgttctac aagtggcaca aaacctggac aggcaacgcc atgtacctct acatgtggat
     1681 tgatacgttt aatatgcgta cgatatgctt cagatttaat tgtgccttcc gttcctagta
     1741 ctaatacatt ttgatttcta gtagtcatta ttgctgttct agcacctggt tcaattacgc
     1801 caatcactgg gattgataag gtcttttgta aatattctaa agctacagca gttgctgtat
     1861 tacaagcaat cacgagcatt tttatatcaa attccattaa tttacgagcg atttcaactg
     1921 tatattgttt tacttgttct cctggtcttg gcccatatgg acatcgtcca atatcaccta
     1981 agtaataaat cgtctcattt ggcaactgac gcataatttc tttagctact gtcaaacctc
     2041 cgacaccaga gtctattaca cctattggtt tattcatatt cggtcatcct tacttttaat
     2101 ttaattttta gtttatcata actaagcatt ggattttagt attatgcact gtgtttacca
     2161 tttttgtcat tataatattt attttaaatc agcccactat catattgtca tgtaatctgc
     2221 ttattaaaaa aatcccttcc aagttattgt gtatctccat tcaatttaat tttgaaagga
     2281 acataacatt ttaactcaaa agggattaat ttttattcta cttcatggtc tgaaccaaag
     2341 aatgatttaa acatgtggaa tgttgtttct ctgttcattg ctgcaatgga tgttgttaat
     2401 ggaatacctt tagggcaagc attaacacag ttttgtgaat taccacactg ctgtaagcca
     2461 ccagtaccca ttaatgcatt taaacgttca tctttagtca tagatcctgt tgggtgcaaa
     2521 ttaaacaaac gaacttgcga gattgcttgt gcaccaacga atttattatt ttcagtaaca
     2581 ttaggacaaa cctctaaaca tacaccacat gtcatacatt tagataattc ataagctgtt
     2641 tgacgttttt tctctggcat acgtggtccc ggacctaaat catacgttcc atcaattggg
     2701 atccatgctt tcatacgttt taagttatcg aacattctag aacgatcaac ttgtaagtca
     2761 cggataactg ggaaagtatt cattggctct aaacgaatag gttgttctaa ttgatcaaca
     2821 atcgcagaac aagattgtct tgcacgacca ttgataacca tagaacatgc tccacatact
     2881 tcttctaagc agttcatatc ccagacaaca ggtgttgttt tttcaccttt aatattaact
     2941 gggttacgtc taatttccat taaacaagca atgacgttta aattttcacg atatggaatt
     3001 tcaaatgttt cttcataagg cttagaatca cttgtatctt gtcgtttaat aattaatttt
     3061 actgtttttt gtttcggttt agattgtgtt tcatgttgtg gagtgttttt cactgattgt
     3121 tcagtcatta ttttttaccc cctttagact tacttgtgta atcacgttta cgaggtggta
     3181 ttaaactcac atcgacgtca tcataagtaa actgcggttt ttcaaatgcg ccttggaatg
     3241 aggccattgt cgtttttaac cactcttcat cattacgctc tgggaattct ggtttataat
     3301 gggcaccgcg tgattcgtta cggttatatg caccaatcgt aataacacgt gcaagtacta
     3361 acatgttcca tagttgacgg gtaaagaata ccgcttggtt actccaagtt tgagtatctt
     3421 ccatatcaat atcttcataa cgtttcatca attcaacaat ctttttatct gtttctaaca
     3481 gtttttcatt ttcacgaaca acagttacat ttgctgtcat aatttcacca agttcacggt
     3541 gtaatttata tgcattttct gtaccgcgca tagctaataa tttatcaaaa cgttcttgct
     3601 cttcagcttt acgcttttca aaaatacttt cgtccatatc agtatatgat cgatcaatat
     3661 ttgaaatata atcaatcgcg tttggacctg ctactgtacc accataaatc gctgataaca
     3721 atgaattggc acctaagcgg ttaccaccat gttgagagaa gtcacattct ccagctgcaa
     3781 ataacccttt aatatttgtc atttgatcat aatctacata tagaccaccc attgaatagt
     3841 gaacagctgg gaaaatcttc attggtactt tgcgtgggtc atcaccagtg aatttttcat
     3901 aaatctcaat gataccacct agttttacat ctaactcatg tggatcttta tgtgacaaat
     3961 caagatatac catgttttcg ccatttatac ctaatttttg gttaatacat acatcgaaaa
     4021 tttcacgcgt tgcgatatca cgaggtacta agttaccata atcaggatat ttctcttcta
     4081 agaagtacca aggcttacca tctttatatg tccaaattcg tccaccttca ccacgtgctg
     4141 attcactcat tagtcgcagt ttatcatcac cagggattgc agtaggatga atttgaatga
     4201 actcaccatt agcataaata gcgccttgtt ggtaaacaat ggaagccgct gatcctgtat
     4261 taatcattga gtttgttgtt ttaccgaaaa taataccagg gccacccgtt gccataataa
     4321 ctgcatctga accaaatgtt tcaatctcag cagttgtcat attttgtgca acgatacctc
     4381 ttgcactatc atcgtcacct ttaactatgc caaggaattc ccatccttca tacttcgtaa
     4441 ctaatccatc tacttcatat gcacgaactt gttcatccaa tgcatataat aattgttgtc
     4501 cagttgttgc ccctgcatat gctgttctgt gatgtaatgt accaccgaaa cgtctaaaat
     4561 ctaatagacc ttcatttgtt ctattgaaca ttacgcccat acggtctaat aaatgaataa
     4621 ttttaggtgc tgcctctgtc atcgctttaa caggtggttg gtttgcaagg aaatcgccac
     4681 catacactgt atcatcaaag tgaatccaag gagaatcgcc ttccccttta gtattgaccg
     4741 caccattaat gccaccttgg gcacaaacag agtgcgaacg ctttactggt acaactgaga
     4801 acaaatctac atgtgcacct ttttctgccg ctttaattgt tgacattaag cccgctaggc
     4861 cacctcctac aacaataaga tgtttctctg ccataaaaat ttcactcccc taaattttca
     4921 atctatattt gttaaatgcg atgtattaca taaaggcaat aattgcagta acaccaatat
     4981 acgaaataac taaaaatacg attaatgaaa cccatgtaaa tactcgttgt gattttggag
     5041 attgaagtcc accccaagta actaagaatg accataagcc atttgcaaag tggaacacaa
     5101 cagcaataat acaaataata taaaatattg cccatccagg atgttgcaat gtttcgtgca
     5161 ttaaatcgta attcacttct ttgccgtaaa atgctttttg taaacgtgtt tgccataaat
     5221 ggataccaat aaagataaat gttaagatac cactcactct ttggaagaag aacatccagt
     5281 ttctaaaaat cgagtaatgt ccaacatttt cttttgctgt aaatgcaatg tgtataccaa
     5341 acaaaccgtg atataacaac ggaatgtata taaataaaaa ttctacaata attagaaatg
     5401 gtaatgattc cataaagtta gatgccttat taaacgcttc agcaccttgt gttgcttggt
     5461 gattcactaa taaatgaacg accaaaaatg cacctattgg gataatacct aataacgagt
     5521 gaatacgtct tagataaaat tcattttttg attgagccaa aaggagtccc ccctgtgaac
     5581 gaatatttaa tttattgagc tatttatatt aaacgtacgc ttaaccccct aaagtgatat
     5641 cgtttctagc gttgtcatta tcattaagcg aaacatttta aagacaaata cacactgcac
     5701 gatcaccaaa ctgcatgtcg aacaatgtaa catttggatt cgatatttaa aattgcttgt
     5761 gatgataaac tttctcattt agaaaacgct tccacgtaca ttcaaaaaaa taactttgtt
     5821 aaccatattg taacattatt tcatatattt tggggcatga gaatgattct cacgcccagt
     5881 aatttattta tgcaattgtt catgtaggtt ctttgcgacg ttttcaggaa tacctatatt
     5941 tttaaaatct tcaagtgtag cttccttcat tttcttgatt gaaccgaatg aacgcaataa
     6001 taatgtttta cgtttgttac cgataccatc tatatcatca agtattgatt tcaagcctgt
     6061 cttttgacgt gtttgtctat gaaatgtgat tgcgaatctg tgaacctcat cttggatacg
     6121 gtgcaacaaa taaaatgcct ggctattttt cttcagtggt acaatttctg cactagcgcc
     6181 atataataat tcagatgttt ggtgtttatc atttttctgc aaacctgcaa cagggatatc
     6241 aagacctaat tcgttttgta gcacatcaat aaccccgttc atatgtcctt taccaccatc
     6301 tactattatt aaatcaggta atggtaatcc ttcgtttaaa acgcgagaat atcgtcgtct
     6361 tactacttct ctcattgatt tgtaatcatc tggaccttta accgttttga ttttatactt
     6421 tctataattt ttcttatctg gtttaccgtc gacaaatgta accattgctg acactggatc
     6481 cacaccttga atattagaat tatcgaatgc ttcaattcta attggtgttt gaattcccat
     6541 ttgtgttcca agttcttcaa tagctttaat cgttctggac tcatcacgtg atattaattc
     6601 aaatttatta tttaaggata ctttagcgtt atgtgcagct aggtcaacca tatctttttt
     6661 gggacctcgc gcgggttgaa cgattttagt gtccacaaca gattgaatca tttctttatc
     6721 caaattacgt ggtacatgaa cttccttagg taaaatatgt tggtttaagc tataaaattg
     6781 tccaataaat gtataaaatt cttcttcttc tgtttgctgt aatggaatca tcgttgtatc
     6841 tcgctttatc atattacctt gtcgtataaa gaaaacttgg atacacatcc atcctttatc
     6901 aacactataa ccaaagacat cacgaatcgt tttatctgat gacataattt tttgtttgtt
     6961 tgtcagattt tgaatatgtt gaattaaatc tctatattct ttagcccgtt caaaatcaag
     7021 tgattcactt gcagttaaca ttcgctcttc taaacttttt aaaattgttt tgtcttcccc
     7081 attcagaaaa tcagtaattt ccttcgtcat ttgtgcgtat ttactcaaat caacgtcata
     7141 tacacatggt cctaaacatt gtccaatatg gtaataaaga cataatttat ctggcatctt
     7201 atcacatttg cgatatggat atattctgtc taataacttt ttagtttctt gagcagaata
     7261 tgcattcgga tacggtccga aatatttgcc agtaccttgt tttacagttc tcgtcactag
     7321 tagtctagga tatttctcct tcgtaatttt aataaatgga taacttttat catcctttaa
     7381 taatatatta tatcttggtt gatattgttt aatcagattc aattccagta aaagtgattc
     7441 tgtttcactt gacgtgacaa taaactcaaa gcgacgtatt tcaccaacca gtctcgttgt
     7501 tttagcatca tgagcacccg taaaatatga tcgcaatcga tttcttagct ttttagcttt
     7561 gccaacatat atcacttgat cattacgatc tttcattaaa tagcatcctg gttccatagg
     7621 tacgacattt aatttatttt taattcgttg cttatagtct tccaaaaata tccccccttc
     7681 taattttaaa atgaatgatg ctacaaaagt gcttcaaatt tatcaccact aattctagtt
     7741 aataatcaac atcttcgagt atgacttttc atgcacatca tgtaatattg aacatggttt
     7801 tatcaaacca actgctacaa atctatcagc atgctagatt atcatttaac gttcatagat
     7861 ttattaatcc caccattctc aagtcgtaaa caatatgatg acttatcatt caacttttta
     7921 tattaaaaac acaaacaaaa actggagcaa ttcattaaag aaatgcccca gtcgtcattg
     7981 gttgtaactt ataaatgttt atctaaaact tcagctaagt tttcttttgg ttggaaacca
     8041 acaactttat caactggttg accgtcttta aagacgatta atgttggaat actcatcact
     8101 tcatatttag ctgcagttga tggattttca tcaacatcta attttaaaat gtcagcttta
     8161 ccttcatagt cagctgctaa ttcttctaat accggagcga tcattttaca tggaccacac
     8221 catgttgccc aaaaatctac tagttgtaca ccagattcta cttttgaatc aaaatctgca
     8281 tctgttactt ttacgattgc cataaatgcc aatcctcctt aattattatt atgatgttca
     8341 aattatatca gataacatgc ttcatgtatt tctatttgct caatttttat gcttatttca
     8401 aataacatgt ttgaaatgta ttcttgttgc tttacattat tttaactgca gctatttaat
     8461 ttatcaaatt ataatttatt ttagtgttgc aacggtaacg ccaaatccac cttcgcttgg
     8521 cataccacct ctaaagtcac taacactttt atgctttttc aaatgttgtt gtacaccttt
     8581 ttgaagtgca cctgtacctt taccatgaat gatataaact tgttcgtaat tacttaaaac
     8641 ggcttgatct aaatattgat ctagttcaat taaagcatcc tcataacgat agcctcgtaa
     8701 gtcaagttca gttttaattg tttgacgatt ttgacgtgta accattttcg ttggcttaac
     8761 tttttctttt tgttttttct ctaaatcttc aataggtaac ttcattttaa taattcccat
     8821 ttgaacaatt gcttcttcat cattgacaat ttctaaaact tcaccctttt gaccgtaaga
     8881 taatactttt acttcatcac cagcaacaat tttatcgtat ttttgctttt gtacattttg
     8941 ctttatagat ttcgcttcat aatgatcatc taatcgtttc ttcttatcaa tcaattcatg
     9001 ttctttaaca tctgcacctt tttgttcacg caattgtctt aagtctttaa taatatcgtc
     9061 agcttctttt gttgcagcct taatcttctg atttgctttt tctttcgctt cctctattag
     9121 agacttttca taattttgga attgttgata ctgcttagat aaatcatcat gcacttgctc
     9181 cgcttctttt acaagacggt ccagttctaa cctctgtgtc tctacacgtt tgtaattacg
     9241 ctctaatgat tcaatcattt catttatttc tttttcatca gtaccaatca tcgtcttagc
     9301 cttattaata atattcaaac taagacctaa ctttttagaa atgtcaaaag catttgaacg
     9361 acccggcaca cccattaata acttatacgt tggactcaaa gtatctacat caaattctac
     9421 actcgcattc ataacgcctt ctcgattata actatatgct ttaagttcag gatagtgcgt
     9481 cgttgccatt actagagaac caatttttct aacatgatct aaaatgctca ttgctaatgc
     9541 agcaccttca ctcggatctg tacctgcacc taattcatca aataaaacta aactatgttt
     9601 gtctgcatgc tttaaaattt caactatatt cgtcatatga gatgaaaaag ttgataatga
     9661 ttgttctatt gattgttcat ctccgatatc gcaatataca tttttaaata cacttaactg
     9721 actaccatca agtgtgggaa tcaacaatcc tgattgagcc ataacaataa ttaaacctaa
     9781 tgtttttaat gttacagttt taccacctgt attcggtcct gtaataatta ccgtttcaat
     9841 atcttccata aattcgatgg tattagctac aacagtctca cgatttaata atggatggta
     9901 tgctttaggt aaatatacag tacggtcctc tttaaatatc ggctttgttc ctttaatact
     9961 tctactatat ctcgcttttg cgattaaaaa atctaactga cccatgactt gttctgccac
    10021 aagtagtgca tctttgtccg cagccacata accagttagt tgcgttaaaa tgcgttcttt
    10081 ttcaattgct tcgtcatgac gtaatcgact aatttgatta ttcatttcaa caactgatga
    10141 tggctcaata tacaatgttt gtcctgaagc agattgatca tgtacaatcc cattaaaatc
    10201 ttgtcgatat tcagctttga caggtataac gtttctttca ttcctaactg ttacaatagc
    10261 atctgataat tttttctgat ttgcttggct tttaacaata cggtccaaat tttgtctaat
    10321 acgttgattc gtgctagaaa ttttacttct aatcccttgc aattcataac tcgcattatc
    10381 atataaatca tacgtatcgc atgtttcatt tatttgttga aaaagatcag ttaacacagg
    10441 taattgattc atcttgtcat ctaatattgg gtatttaaca ccttcatctt cttcaaccaa
    10501 ttgattataa aatgtcttga attgattttg tacttgaatt aatcttttta tcaagttaag
    10561 ctctgataca tttaaaacgc cgccaatatc agcgcgatga atgaatgctg atactttaga
    10621 taagccactc aagcttggta aacgatgctt attatagatt tgagcaatct catccgtttc
    10681 ttccatttga aaaacaaccg tttcaaaatt agtagctggc atcatttgat tgaccttttc
    10741 caagcctaag tcactaatag tttcattggc aacgagtgat tttatttttt caaattctaa
    10801 gacgtctaat gttttttgtc tcataaaatc cctctatttc ttaagttttg tattattttc
    10861 aataaagtct ttaaaagctt cacgcgataa tgcgttaatc actctatctt ttgttacaaa
    10921 tcctttttgc gcagttgcta cgccataatt cataaaatct aaatgatttg tatgatgcgc
    10981 atcagtgtta atagttaatt tcacatttgg atatttacga acgatatcag cgctcagatc
    11041 cagtcgatgt ggattggcat taatttctaa tactgtattc gtttcttcag ctaatgccat
    11101 taattgttca atattcggtt tataaccatc tcttctacct ataatacgcc ctgttggatg
    11161 cgctatatgt cgcacgtatg gattgcgaca tgcattagct aatcgttcca taatttgttc
    11221 ttctgattgg ttaaagcttt gatgaatagc tccaattaca taatcaagtt gtgctaaaat
    11281 ttcatcatca taatccagcg agccatcagg taatatatcc atttctgtac ctgaataaat
    11341 atcaatttca ctatattctt tatctaaagc cttaatttct tcgttttgtc ttaaaagtct
    11401 ttctacttgt aagccattag caacacgtaa actttgtgaa tgatcagtaa ttaccatgaa
    11461 tttataacct tttgcgatat ttgcttctac catgtctcga atagaaaacg caccatcact
    11521 atacgttgta tgcatatgaa tatcaccatt aatatcatct attgtaatga tattacttag
    11581 atctttatca aattcgctac catcttctcg catagcaggt ggtataaaat tcacattaaa
    11641 atgttcatat atcttggctt cactatcata ttgaattaat gtaccatcag cttgttcaat
    11701 tccatattca cttacttttt catcacgtgc tttagcaagt tgtcgaattc ttatattatg
    11761 ttcttttgac ccagtaaaat gctgcaatgt atgataaaaa gcacttggtt caattaatcg
    11821 aaaatcgaca ccaatcgttt catcatcata cgctaattct aatgaaactt ttgtgttccc
    11881 cactgcaact tcttttactt tattgggaat atttaataat tgctgctgca ctgcttttgg
    11941 gttatcggta cttattatga aatctaaatc tttgctcatt tctttaaaac gacggaagct
    12001 tcctgcagat gaatattgat cgatataatt taatgtatct atataatcaa tgatttcttg
    12061 attaagtctt ctcatttgat caattggata tctatctttc ttagcaccaa gttgtttcac
    12121 agcttctaat atgttttgtt ccgttttctt agcaaatccg cttaattcac taacttttcc
    12181 attttcacaa gcaacttgaa gtgacgcttt atcaacaata ttcaactctt tatatagctt
    12241 agcaattttc ttgcttccaa gtccttgaat tttcaaaagt ggaataagac cttccggaac
    12301 ttcttcctgt aattgctgta aatactgaga ttcaccggtc tcacggtaat cattgattac
    12361 ttctgcaaca cctttaccaa tgccttttaa ctccgttaca tcagatattt catctaatgg
    12421 tcgttcatct aattcaagac tttgagctgc ttttcgatac gctgatattt taaaagtatt
    12481 ttcccctttt aattccatat aagtagcaat ttgttctaat agtttgataa catctttttt
    12541 tgtcataata acactccata aaaagaagac caggacgtat cattaatata tacctttgtc
    12601 ctgacctctt atgataattt ataaattaat ggtgaaagcc gataaatatg ggatgtgaaa
    12661 aatcaatgaa tgactcacaa tagatatttt aagctgatgt tgtaatgctt cgttaggata
    12721 taatgccaat agatataacg taaagtgtaa gacaattatc gtcataaaca caccaactat
    12781 cattcccatt gcacgactga aaatatgaat gttttgatac gctattattt tatcaaaagt
    12841 tacgataatt agatataaaa tgaacttaca aaacaatgta atcattaaaa aagctacaat
    12901 cgcttcaaat cgattttgta gatgattaaa atgaaacgca aaagttgtat taaatgctgt
    12961 tgttttagga tatggaataa atacaattaa tctttctaca atagatttgt aaaattgact
    13021 ggcaatccac aatgatacaa tcgttgcact caaatgtatc atagataacc aaaaacctcg
    13081 tctgaatcca acgatgacaa aatacacaaa gaaaatgatt atgataaaat caatgaccat
    13141 ttattgctca cgctgctgca atttgtgaat ttgttgtttc aaacgtcgat tttcttcttc
    13201 tagtagtact ttttcatgca taatattcac agcagttagt attgcttttc ttgaagtatc
    13261 taaacctgct gctttatacc ctaattcttt tattttatca tcaactaaat gtgctacata
    13321 tcgtatgtgc tctgggttat cttccccaac aattgtaaaa agctgatcat taattgatac
    13381 atttaccttg tttttaaact gtgtcattta taatttctcc tgatcctttt tttaaaatct
    13441 aaattcacgt tataaaatat gactggatag tttgtctgaa tttgatacta atattgttat
    13501 attgcaatta tgataaaaca acaacacaat ctctatagat gacttaatgt tctttttata
    13561 atgaaataat gtaaagaatt ttctattcaa tactttatca tgtttaaatt gtgtcactat
    13621 aacattttca taaacattat acatgaccac tatgtatttt gtaagtatcc gcaattaatt
    13681 ctttacaaca tacataaatg tttctgacgt tattatcatt tatgatatga ttatttttgc
    13741 taaagacaat gaaattttat gaaaggattt acacaaatgg cgaatatcgt ttttaaattg
    13801 tcggataaag acataacgac attaatgtca cgcatttctt ttgatactga gaatttacct
    13861 caaggtatga aagcacgtgc aaagtatcaa aatacaactg taaatattta ccaatcaggt
    13921 aaagtcatgt ttcaaggtaa tcatgcagaa gctgtgtctg aagaacttct accgcagcat
    13981 tctcaattga atactaataa aactaaaaag aaaaatatgg ctaattcttt tcttgaacaa
    14041 actttaatgt atgatcaatt taactgtatt ggtagtgatg aggctggaag tggcgattac
    14101 tttggtccgt tgactgtgtg tgctgctttc gttaccaaag agcatgtccc tattttaaaa
    14161 actttgggtg tagatgattc aaaaaaatta accgatacca aaattgtaga acttgctgag
    14221 caattggtta ctttcatacc acattcatta ttaacactac acaatgaaaa atataatatt
    14281 cagcaagcaa aaggctggac tcaagtaaaa atgaaagctg cccttcataa tgaagccatc
    14341 aaaaatgtac ttgaaaaaat tgattcgtct caattagact atatcgtcat tgatcagttc
    14401 gcaaaacgcg aagtgtatag ccattacgca ttatcagata taccacttcc aaagaaaaca
    14461 aaatttgaaa caaaaggaga atcgaagtca ttagccattg cagtggcaag cataatttct
    14521 cgatacgcat ttgttacata tatggatcaa atatcaaaaa atattaatat gacgattcct
    14581 aaaggtgccg gtgctaaagt cgatgtaatc gccgccaaaa ttataaaaaa atacggtctt
    14641 tcacgtttag ataccatttc aaaaaagcat tttaaaaatc gtgaaaaagc ccaaaaaatt
    14701 ttaaagcctc tttgattttt aatcattaga ggcttttatg cagttgtgcg aagcatcatc
    14761 tgtattccgc tgttcctctt tgacttttta aatgcattgg aaccaaattg gtgaacccaa
    14821 aaataaaacc ccatgttagg gatatcaatc tacttcagat atccttatac atggggttta
    14881 aatcattatc taataacagc accttgttca attaatgctg cttcaatttc cgcttgtact
    14941 tttgaaacgc gctcatctgt caatgtttct tctgtgtcta aataatttaa acgtattgca
    15001 attgattttt tacctttttc taaatgttcg ccctgatata catcaaagac aagtgtatct
    15061 tttaatatat tgccaccatg tgcatgaatc gttgataata aatcagctgc tggaatattt
    15121 tgatctactt ctaatgcaat gtcacgagac atgcctggga atctcggaat tggctggtaa
    15181 ttaatgtaac ctaccgacac agccattaat gcatcaaaat tcaactcaaa aacatacgta
    15241 cgttttaaat cattatcagc tgctaatatt ggatgtaatt caccaataaa accaacaact
    15301 ttattctcta ataagatttc agcagtacga cctggatgta atccatcaat atcagcacgg
    15361 cgataactaa attcaagatt taacttttca gatactcgat ccacgacacc ttttgctaaa
    15421 tagaaatcaa ccgtttcttt cttaccttgc cattgattga ctacataatc tccagttaaa
    15481 ataccactta aatattcaac ttgatctggt agttcacctt ctccattagc aaagaagaca
    15541 ttgccgattt caaataattt tacatcttta tttttgcgtg ccacattata tgatgccgct
    15601 tcgattaaat gtggtaataa actttgacgt aatgacgcat gcgcttcact cattggcatc
    15661 aataaatcaa ttgtttgacg ctgttgcatc gaaaatgcag tagcatcttc tttagaaact
    15721 aacgaatacg taatagcttg gtctaatcca gcaccttcta acacttcttt aaccattcta
    15781 gttttatatt ggcgatcagt tagctgacca ctagtaactt tatcgaagac aggtaacgtt
    15841 gatggaatat cgtcgtatcc atatatacgt gcaacttctt caattaaatc ttctttaatt
    15901 gtaatatctt tacgacgtga tggtactagc actgtaataa catcatcatt tatttctgta
    15961 tcaaacccta gttgattaaa aatagtaaca atatcatttt gtgacaaatc aaatccaata
    16021 gtgcgattaa ttttatcagc agtgatgtcg attggtgtaa taaatgcacc aagttctcct
    16081 gaagacactc tatcttttag cacttttccg tttgcataag tttgtaataa ataacatgca
    16141 cggtcgactg cttcatctac aaattcagta gctattcctt tttcaaaacg actagatgat
    16201 tcactgcgta aatttaaacg tcttgatgta tgacgaattg aaactggatc aaaaatagca
    16261 ccttcaatca ctatatttga tgtttgttct ttaacttctg aaaaatcgcc acccataaca
    16321 ccagctaatg caattggagt ttgtccatta gtaatgacaa tatcgctcgt taataattca
    16381 cgttctgtat catctaatgt tgtcattttt tcgccttcat tagcttgacg aacaacaatt
    16441 tgttgtgaac caatcgcatc ttgatcaaac atgtgcaatg gttgaccgta ttctaataac
    16501 acataatttg aaatgtcaac aacattatta ataggacgta tacccgcttt tattaagcgt
    16561 gcttgcatcc aaattggcga gggttcaatt gtcacgtcgt gaacaacacg tgcactataa
    16621 tatggtactt tatcttcatt ttcaattgtc acagtcagtt catcatttgc agataaatca
    16681 agctcatttg atgttgtctc tggcttagtc atttttgtat tatataatgc tgcaacttca
    16741 taagcagtac ctatcatact taaagcatct gcacgattcg gcgttaaatc aaattccatt
    16801 acttgatcat ctaaatataa agcttgtaag gcatctgttc ctggaacttg ggcttcacta
    16861 aatacataaa tgcctgattc aaaacttttc ggtatatagt tacttgaaat accaatttct
    16921 tgtaacgaac aaatcatacc ttctgaacgt tcaccgcgta atttggcacg cttaatttta
    16981 ataccaccag gcaatctgcc acctacttta gcaacaatga catattgtcc tgcatcaacg
    17041 ttcggtgcac cacaaacgat ttgtacaggt tcgtcttctc cgatatcaac ttggcaaaca
    17101 tttaatttat cagcatcagg atgtttctct tttgacttaa cgaagccgac aactaaattt
    17161 ttgatatctt ttgtgtagtc aattaaatca tccacttcaa tacctgtgcg cgtaatacgt
    17221 tctgccaaat tacttacaga atcatcgatt gttacatatt ctttcaacca ttcatttgat
    17281 atcaacatta catgtcacct ctatcttcta ccgctttaaa ttgatctaaa aatctcacat
    17341 cattagtata gaaatgacga atatcttcta taccatattt caacattgca atacggtctg
    17401 gtcccatacc aaatgcaaat ccagagtact ctgaagaatc aaaaccagcc atttctaata
    17461 cattaggatg taccattcca gcacctaaaa tttcaatcca tcctgtgtgt ttacacacat
    17521 tacaaccttt tcctttacat ttaaaacatg acacatcaac ttctacagaa ggttcagtga
    17581 atgggaagta acttggacgt aaacgaattt cacgatcagc accaaataat ttcttagcta
    17641 acaattctaa agtacctttc aaatcactca ttttaacgtt tttatcaaca actaatcctt
    17701 cgatttgtgt aaattgatga ctatgtgtcg catcatcaga gtcacgacga tacactttac
    17761 cagggcaaat aattttaact ggaccttgac catgacgtga ttccatcgta cgtgcctgca
    17821 ctggtgatgt atgcgtacgt aataaaattt catccgtaat atagaaacta tcttgcatat
    17881 cacgtgcagg gtgtgattta ggtaaattca gcatttcgaa gttataatga tcttgttcaa
    17941 cttcatatcc attcacaatt tcataaccta aacctaagaa taagtcttca atttcttcta
    18001 ttgtacgtgt taatggatgc tttgaaccga tttcaatatg acgacctggt aatgatacat
    18061 caattgtttc ttcagccaat tgcttattta atttttcttt aactaacatc tgttgtcttt
    18121 catctaattc attttgaatt gtttgacgca attcattcac tttttgacca aacgcaggtt
    18181 tatcttcatt cggcaaatcc ttcatcaatt tcattagtcc gctaactgac ccttttttac
    18241 ctaagtattt cactttaact tcttgcagtg cacgttcatc atttgcttca ttaatatcta
    18301 caagcgcttg ttgttttaac tctgacattg tttgttgttc agacatatgt cactgacctc
    18361 cctattcgaa ctattcattt tctatttatc atatttgttg tttaactaaa aaaagacttt
    18421 catcctctta aaaaataagg gacgaaagtc atttccgtgg taccacccaa atttatgcct
    18481 aagcatacac ttgtttaata ttgataacgg attgtctttc cgacttaaat ctctttaagt
    18541 aaccaaaaag gtgaaaagac tttaaataat tggaataact tgcagtcacg attattctcc
    18601 ctaaaacaat tatttatata aatgtccatg cctttttatt ggtttatatt caattgtgta
    18661 tgcattcacg tagaaatgtt ctgttaaaca attaattata attatatcgg aaaactttca
    18721 acacggtcaa cctttcaaat gataaagtaa aatactacct gcaatcgcta catttaaact
    18781 ttcagcttta ccataaatag gtatgattaa attttgtgta gtatgtgcta ataattcagg
    18841 attaacacct tctccctcat tacctaatag taatgcaaaa gaatcacttg aagtaacttc
    18901 tttgtatgcc actgcgtttt caagtgctgt accataaaca ggaccattaa attgagtaat
    18961 aaacgtatcg agatcttgtg tcataactgg caaatggaaa acactacctt gactcgctcg
    19021 caacacttta tcttgataag gatctgtcgt acccttctcc attattacag catccattcc
    19081 agcagcatcc gcagttctaa ttaatgtgcc taaatttcca ggatcttgaa cacgatcgat
    19141 gagcaatact tgttgtgctt tagaaatatc ataatgcggc ttctcaatga ttgcgaaaaa
    19201 cccttgtggt gtcactgtac ctgataaaga ttcagcaact ttcatgttta tttcaaaaac
    19261 ttcttgcgcg tatgcgataa tttgctgatc taatcttgcc ggttcaattg caaataattg
    19321 tgtaattaca attccacttt gataagcttc ttcaattaaa tgcacacctt caattaaagc
    19381 taatccagtt ttatccctct cacgtttctt ttttagcttg ttcgcttgtt taattctatt
    19441 attttgtgca gaagt
//
LOCUS       DALPQQ010000042        19335 bp    DNA     linear   BCT 22-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus strain K18-6-464
            SAMD00233528-rid16434743.denovo.042, whole genome shotgun sequence.
ACCESSION   DALPQQ010000042 DALPQQ010000000
VERSION     DALPQQ010000042.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMD00233528
            Sequence Read Archive: DRR236061
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 19335)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 19335)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001543423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001543423.1
            Genome Coverage       :: 77x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/22/2022 17:09:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,811
            CDSs (total)                      :: 2,743
            Genes (coding)                    :: 2,689
            CDSs (with protein)               :: 2,689
            Genes (RNA)                       :: 68
            rRNAs                             :: 2, 4, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 4, 2 (16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 54
            CDSs (without protein)            :: 54
            Pseudo Genes (ambiguous residues) :: 0 of 54
            Pseudo Genes (frameshifted)       :: 27 of 54
            Pseudo Genes (incomplete)         :: 27 of 54
            Pseudo Genes (internal stop)      :: 10 of 54
            Pseudo Genes (multiple problems)  :: 10 of 54
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..19335
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMD00233528-rid16434743.denovo.042"
                     /strain="K18-6-464"
                     /db_xref="taxon:1280"
                     /geo_loc_name="Japan: Niigata"
     gene            complement(127..993)
                     /locus_tag="O7798_001223"
     CDS             complement(127..993)
                     /locus_tag="O7798_001223"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501361.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fructosamine kinase family protein"
                     /protein_id="HDC2863490.1"
                     /translation="MNEQWLEHLPLKDIKEISPVSGGDVNEAYRVETDTDTFFLLVQR
                     GRKESFYAAEIAGLNEFERAGITAPRVIASGEVNGDAYLVMTYLEEGASGSQRQLGQL
                     VAQLHSQQQEEGKFGFSLPYEGGDISFDNHWQDDWCTIFVDKRLDHLKDELLNRGLWD
                     ANDIKVYDKVRRQIVAELEKHQSKPSLLHGDLWGGNYMFLQDGRPALFDPAPLYGDRE
                     FDIGITTVFGGFTSEFYDAYNKHYPLAKSASYRLEFYRLYLLMVHLLKFGEMYRDSVA
                     HSMDKILQDTTS"
     gene            1211..2275
                     /locus_tag="O7798_001224"
     CDS             1211..2275
                     /locus_tag="O7798_001224"
                     /EC_number="1.3.5.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501362.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="quinone-dependent dihydroorotate dehydrogenase"
                     /protein_id="HDC2863491.1"
                     /translation="MYKLIKPFLFKIEPEKAHGLTIDALKTLQKFPVLFPVVDKLFTY
                     KNPTLSQTIQGNTYDNPIGLAAGFDKSCEVPKALEHLGFGALELGGITPKPQPGNPQP
                     RMFRLLEDDALINRMGFNNIGMNKALSHLRKNAYQVPVGINVGVNKMTPYEARYQDYI
                     KVIDTFKHDVSFFTVNISSPNTENLQNFHDKDEFSMLCQALTAFKKQHDVTVPIYLKL
                     TSDMDFDGLKALLPAITETFDGIILANTTRQRDGLTSANKVEEGGLSGRPLFERNLKL
                     IKYAYQQTNGEFLIIGTGGVFSTEDAIKMMRHGASLIQIYSSLVIEGPGLTKKMNKGI
                     ARYLKDHHFDNVSDIIGLDA"
     gene            2430..2705
                     /locus_tag="O7798_001225"
     CDS             2430..2705
                     /locus_tag="O7798_001225"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501363.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDC2863492.1"
                     /translation="MTKETDNKKTVATSDNKDTQQQNQPEEDERQGLNGYRKTDLDLE
                     IEQELREMMKTGENETKNDYKKFKVFSLISTLVIVILAIIRFVHKMM"
     gene            complement(2891..3613)
                     /locus_tag="O7798_001226"
     CDS             complement(2891..3613)
                     /locus_tag="O7798_001226"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501364.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="epoxyqueuosine reductase QueH"
                     /protein_id="HDC2863493.1"
                     /translation="MINAEPIISKMKNQKINYDKVLKKLIGQWEREAIRPKILLHSCC
                     APCSTYTLEFLTQYADIAIYFANSNIHPKNEYLRRAKVQEQFVEDFNRKTGANVKYIE
                     APYEPHKFVKMVKDKELADEKEGGLRCTACFEMRLDIVAKAAVEHGYDYFGSAITLSP
                     KKNAQLINELGMDVQKIYDVNYLPSDFKKSKGYERSIEMCNDYNIFRQCYCGCVFAAM
                     QQGIDFKTVNKEAKAFLEQYPD"
     gene            3967..4416
                     /locus_tag="O7798_001227"
     CDS             3967..4416
                     /locus_tag="O7798_001227"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501365.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glyoxalase/bleomycin resistance/extradiol
                     dioxygenase family protein"
                     /protein_id="HDC2863494.1"
                     /translation="MTALFPYIAFENSKEALAYYEEVFGATDVKRLEVGEEQASHLGM
                     TKEEAQEATMHAEFEVLGVKVLCSDSFGRADKINNGISLLIDYDVNNKEDADKVEAFY
                     EQIKDHSSIEIELPFADQFWGGKMGVFTDKYGVRWMLHGQDYTAIQQ"
     gene            complement(4497..5084)
                     /locus_tag="O7798_001228"
     CDS             complement(4497..5084)
                     /locus_tag="O7798_001228"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501366.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TetR/AcrR family transcriptional regulator"
                     /protein_id="HDC2863495.1"
                     /translation="MTIDRRIRKSQVAMRNAFIELLHQHQLEEITVQQIADLADVNRS
                     TFYTHYYDKYDLLEKLEDQQLEEIRDFIHDEKLNGAVKLSTDNIHQIMTVLIEMIEKD
                     IAFYQLMFRMGKDSNIHEKLYDLIMCHLQRYKNENDQINGIPFSYFMSYVSGAGLSFI
                     RHWVEDPNRIDKVDLIRHFNTIVNQGPATIIKNIQ"
     gene            complement(5062..5154)
                     /locus_tag="O7798_001229"
     CDS             complement(5062..5154)
                     /locus_tag="O7798_001229"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501367.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDC2863496.1"
                     /translation="MINVGDLWDNEHNVYNHWGGLDINDYRSTY"
     gene            5217..6899
                     /locus_tag="O7798_001230"
     CDS             5217..6899
                     /locus_tag="O7798_001230"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501368.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CocE/NonD family hydrolase"
                     /protein_id="HDC2863497.1"
                     /translation="MNQHLLGNPKLTVTHVNEVKAGINHIVVDSVQYGNQEMIMEKDV
                     TVEMRDGEKLYINIFRPNKDGKFPVVMSADTYGKDNKPKITNMGALWPTLGTIPTSSF
                     TPEESPDPGFWVPNDYVVVKVALRGSDKSKGVLSPWSKREAEDYYEVIEWAANQSWSN
                     GNIGTNGVSYLAVTQWWVASLNPPHLKAMIPWEGLNDMYREVAFHGGIPDTGFYRFWT
                     QGIFARWTDNPNIEDLIQAQQEHPLFDDFWKQRQVPLSQIKTPLLTCASWSTQGLHNR
                     GSFEGFKQAASEEKWLYVHGRKEWESYYARENLERQKSFFDFYLKEENNDWKDTPHVI
                     YEVRDQFYKGEFKSASAFPLPNAEYTPLYLNAENHTLNHAKISSAHVAQYDSEDKQQD
                     VSFKYTFDKDTELVGNMNLKLWVSTKDSDDMDLFAGIKKLDRRGNEVNFPDFNHIENG
                     QVATGWLRVSHRELDQEKSSIAQPWHKHETELKLSQDEIVPVEIELLPSGTLFKQGET
                     LEVVVKGSEIVIGNSTPGMKTRYEHEETVNKGMHMIYTGGKYDSQLIIPIVN"
     gene            complement(7028..7411)
                     /locus_tag="O7798_001231"
     CDS             complement(7028..7411)
                     /locus_tag="O7798_001231"
                     /EC_number="4.1.1.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015901315.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate 1-decarboxylase"
                     /protein_id="HDC2863498.1"
                     /translation="MIRTMMNAKIHRARVTESNLNYVGSITIDSDILEAVDILPNEKV
                     AIVNNNNGARFETYVIAGERGSGKICLNGAASRLVEVGDVVIIMTYAQLNEEEIKNHA
                     PKVAVMNEDNVIIEMIHEKENTIVL"
     gene            complement(7413..8264)
                     /locus_tag="O7798_001232"
     CDS             complement(7413..8264)
                     /locus_tag="O7798_001232"
                     /EC_number="6.3.2.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501370.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pantoate--beta-alanine ligase"
                     /protein_id="HDC2863499.1"
                     /translation="MTKLITTVKEMQHIVKAAKRSGTTIGFIPTMGALHDGHLTMVRE
                     SVSTNDITIVSVFVNPLQFGPNEDFDAYPRQIDKDLELVSEVGADIVFHPAVEDMYPG
                     ELGIDVKVGPLADVLEGAKRPGHFDGVVTVVNKLFNIVMPDYAYFGKKDAQQLAIVEQ
                     MVKDFNHAVEIIGIDIVREADGLAKSSRNVYLTEQERQEAVHLSKSLLLAQALYQDGE
                     RQSKVIIDRVTEYLESHISGRIEEVAVYSYPQLVEQHEITGRIFISLAVKFSKARLID
                     NIIIGAE"
     gene            complement(8257..9075)
                     /gene="panB"
                     /locus_tag="O7798_001233"
     CDS             complement(8257..9075)
                     /gene="panB"
                     /locus_tag="O7798_001233"
                     /EC_number="2.1.2.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017431941.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-methyl-2-oxobutanoate
                     hydroxymethyltransferase"
                     /protein_id="HDC2863500.1"
                     /translation="MKTVSQLIDMKQKQTKISMVTAYDFPSAKQVEAAGIDMILVGDS
                     LGMTVLGYESTVQVTLADMIHHGRAVRRGAPNTFVVVDMPIGAVGISMTQDLNHALKL
                     YQETNANAIKAEGAHITPFIEKATAIGIPVVAHLGLTPQSVGVMGYKLQGATKEAAEQ
                     LILDAKNVEQAGAVALVLEAIPNDLAEEISKHLTIPVIGIGAGKGTDGQVLVYHDMLN
                     YGVEHKAKFVKQFADFSVGVDGLKQYDQEVKSGAFPSEEYTYKKKIMNEVNNND"
     gene            9148..10008
                     /locus_tag="O7798_001234"
     CDS             9148..10008
                     /locus_tag="O7798_001234"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501372.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="oxidoreductase"
                     /protein_id="HDC2863501.1"
                     /translation="MLSVAIIGPGAVGTTIAYELQQSLPHTTLIGRHAKTITYYTVPH
                     APAQDIVVKGYEDVTNTFDVIIIAVKTHQLDAVIPHLTHLAHEDTLIILAQNGYGQLE
                     HISFKNVCQAVVYISGQKKGDVVTHFRDYQLRIQDNALTRQFRDLVQDSQIDIVLEAN
                     IQQAIWYKLLVNLGINSITALGRQTVAIMHNPEIRTLCRQLLLDGCRVAQAEGLNFSE
                     QTVDTIMTIYQGYPDEMGTSMYYDIAHQQPLEVEAIQGFIYRRAREHNLDTPYLDTIY
                     SFLRAYQQNM"
     gene            complement(10094..10798)
                     /gene="budA"
                     /locus_tag="O7798_001235"
     CDS             complement(10094..10798)
                     /gene="budA"
                     /locus_tag="O7798_001235"
                     /EC_number="4.1.1.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501373.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetolactate decarboxylase"
                     /protein_id="HDC2863502.1"
                     /translation="MTNVLYQHGTLGTLMAGLLEGTATINELLEHGNLGIATLTGSDG
                     EVIFLDGKAYHANEHKEFIELKGDEKVPYASITNFKASKTFPLQQLSQDDVFAQIKNE
                     MLSENLFSAVKIYGTFKHMHVRMMPAQQPPYTRLIDSARRQPEEKRQDIRGAIVGFFT
                     PELFHGVGSAGFHIHFADDERAYGGHVLDFEVDDVVVEIQNFETFQQHFPVNNETFVK
                     AKIDYKDVAEEIREAE"
     gene            complement(11076..12035)
                     /locus_tag="O7798_001236"
     CDS             complement(11076..12035)
                     /locus_tag="O7798_001236"
                     /EC_number="1.1.1.27"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501374.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-lactate dehydrogenase"
                     /protein_id="HDC2863503.1"
                     /translation="MKTFGKKVVLIGDGSVGSSYAFAMVTQGVADEFVIIDIAKDKVK
                     ADVQDLNHGTVHSPSPVDVKAGEYEDCKDADLVVITAGAPQKPGETRLQLVEKNTKIM
                     KSIVKSVMDSGFDGYFLIAANPVDILTRFVKEYTGLPAERVIGSGTVLDSARLQYLIS
                     QELGVAPSSVDASIIGEHGDTELAVWSQANVAGISVYDTLKEQTGSEAKAEEIYVNTR
                     DAAYEIIQAKGSTYYGIALALMRISKAILNNENNVLNVSIQLDGQYGGHKGVYLGVPT
                     LVNQHGAVKIYEMPLSAEEQALFDKSVKTLEDTFDSIKYLLED"
     gene            12723..14171
                     /locus_tag="O7798_001237"
     CDS             12723..14171
                     /locus_tag="O7798_001237"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501376.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid permease"
                     /protein_id="HDC2863504.1"
                     /translation="MGSFFNKIARKEDPAIYQNKDGHLKRTLRVRDFLALGVGTIVST
                     SIFTLPGIVAAEHAGPAVALSFLLAAIVAGLVAFTYAEMAAAMPFAGSAYSWVNVLFG
                     EFFGWVAGWALLAEYFIAVAFVASGFSANLRGLVKPIGIELPAALSNPFGTNGGFIDI
                     IAAIVILLTALLLSRGMSEAARMENILVILKVLAIILFVIVGLTAINVSNYVPFIPEH
                     KVTATGDFGGWQGIYAGVSMIFLAYIGFDSIAANSAEALDPQKTMPRGILGSLSVAIV
                     LFIAVALVLVGMFHYSQYANNAEPVGWALRQSGHGVVAAIVQAISVIGMFTALIGMML
                     AGSRLLYSFGRDGLLPSWLSHLNDKHLPNRALVILTIIGVLIGSMFPFAFLAQLISAG
                     TLVAFMFVSLAMYRLRKREGKDLPIPAFKLPLYPVLPAITFVLVLLVFWGLGFEAKLY
                     TLIWFIVGIILYLSYGLRHSKKNDVAEYHPPK"
     gene            complement(14252..15589)
                     /locus_tag="O7798_001238"
     CDS             complement(14252..15589)
                     /locus_tag="O7798_001238"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501377.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate aminotransferase family protein"
                     /protein_id="HDC2863505.1"
                     /translation="MSKAHQLIQEDEHYFAKSGRIKYYPLVIDHGYGATLVDIEGKTY
                     IDLLSSASSQNVGHAPREVTEAIKAQVDKFIHYTPAYMYHEPLVRLAKKLCEIAPGDF
                     EKRVTFGLTGSDANDGIIKFARAYTGRPYIISFTNAYHGSTFGSLSMSAISLNMRKHY
                     GPLLNGFYHIPFPDKYRGMYEQPQANSVEEYLAPLKEMFAKYVPADEVACIVIETIQG
                     DGGFLEPVPGYFEALEKICREHGILIAVDDIQQGFGRTGTWSSVSHFNFTPDLITFGK
                     SLAGGMPMSAIVGRKEIMNCLEAPAHLFTTGANPVSCEAALATIQMIEDQSLLQASAE
                     KGEYVRKRMDQWVSKYNSVGDVRGKGLSIGIDIVSDKKLKTRDASAALKICNYCFEHG
                     VVIIAVAGNVLRFQPPLVITYEQLDTALNTIEDALTALEAGNLDQYDISGQGW"
     gene            15847..16263
                     /locus_tag="O7798_001239"
     CDS             15847..16263
                     /locus_tag="O7798_001239"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501378.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDC2863506.1"
                     /translation="MRLKVLFHFIAAIFISFMLLWMTMLFDLISNQSHLKALLLNLDF
                     LIPSDNTPYILEIICHLLIGSVIYFVFVLLFHTSKRLYYLCYIPLFFLFIALYPFLVF
                     IAQRPIFQFSVTELIGWIITHIFFMSLMALVIPRIK"
     gene            16386..17276
                     /locus_tag="O7798_001240"
     CDS             16386..17276
                     /locus_tag="O7798_001240"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002478556.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fructose bisphosphate aldolase"
                     /protein_id="HDC2863507.1"
                     /translation="MNKEQLEKMKNGKGFIAALDQSGGSTPKALKEYGVNEDQYSNED
                     EMFQLVHDMRTRVVTSPSFSPDKILGAILFEQTMDREVESKYTADYLADKGVVPFLKV
                     DKGLAEEQNGVQLMKPIDNLDNLLDRANERHIFGTKMRSNILELNEQGIKDVVEQQFE
                     VAKQIIAKGLVPIIEPEVNINAKDKAEIEKVLKAELKKGLDSLNADQLVMLKLTIPTE
                     PNLYKELAEHPNVVRVVVLSGGYSREKANELLKDNAELIASFSRALASDLRADQSKEE
                     FDKALGDAVESIYDASVNKN"
     gene            complement(17469..18965)
                     /gene="mqo"
                     /locus_tag="O7798_001241"
     CDS             complement(17469..18965)
                     /gene="mqo"
                     /locus_tag="O7798_001241"
                     /EC_number="1.1.5.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501380.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="malate dehydrogenase (quinone)"
                     /protein_id="HDC2863508.1"
                     /translation="MAKSNSKDIVLIGAGVLSTTFGSMLKEIEPDWNIHVYERLDRPA
                     IESSNERNNAGTGHAALCELNYTVLQPDGSIDIEKAKVINEEFEISKQFWGHLVKSGS
                     IENPREFINPLPHISYVRGKNNVKFLKDRYEAMKAFPMFDNIEYTEDIEVMKKWIPLM
                     MKGREDNPGIMAASKIDEGTDVNFGELTRKMAKSIEAHPNATVQFNHEVVDFEQLSNG
                     QWEVTVKNRLTGEKFKQVTDYVFIGAGGGAIPLLQKTGIPESKHLGGFPISGQFLACT
                     NPQVIEQHDAKVYGKEPPGTPPMTVPHLDTRYIDGQRTLLFGPFANVGPKFLKNGSNL
                     DLFKSVKTYNITTLLAAAVKNLPLIKYSFDQVIMTKEGCMNHLRTFYPEARNEDWQLY
                     TAGKRVQVIKDTPEHGKGFIQFGTEVVNSQDHTVIALLGESPGASTSVSVALEVLERN
                     FPEYKTEWAPKIKKMIPSYGESLIEDEKLMRKIRKQTSKDLELGYYEN"
BASE COUNT         6162 a         3574 c         3047 g         6552 t
ORIGIN      
        1 atagcgatta aaattttatt ttccaacaat aaaaacgcac aaatattttt attgaggcag
       61 ctgtatcgct tctcattgta aaaatatctg tgcatattat ctatttatct caatctaacg
      121 tcttaactaa cttgttgtat cttgtaaaat cttatccata gaatgcgcaa cactatcacg
      181 gtacatctca ccaaatttca ataaatggac catcaataaa tataaacgat aaaattcaag
      241 tctataggat gcactttttg cgagtggata atgtttatta tacgcatcat aaaattcgct
      301 cgtaaaacca ccaaataccg ttgtaatacc gatatcgaat tctctgtcac catataatgg
      361 cgctggatca aataacgccg gacgaccatc ttgtaagaac atataattac caccccatag
      421 gtcaccatgt aataaagacg gtttactttg atgcttttct aattccgcca caatttgacg
      481 tcgcactttg tcatatactt tgatatcgtt ggcatcccat agccctctat ttagcaactc
      541 atctttcaaa tggtccaagc gtttgtcgac aaaaatggta caccaatcgt cttgccaatg
      601 attatcaaaa gaaatatcgc caccttcata aggtaatgag aagccaaatt tgccttcttc
      661 ttgttgctga ctgtgtaatt gagctacgag ttgccctaat tggcgttgac tccctgaagc
      721 cccttcttct aaatacgtca tcactaaata cgcatcaccg ttaacctcgc cacttgcaat
      781 tactctaggt gccgtgatac ctgcacgttc aaattcattt aaacctgcaa tttctgcagc
      841 ataaaatgat tctttacgtc cacgttggac aagtaagaaa aatgtatccg tatctgtttc
      901 gactcgatat gcttcgttta catcaccacc actcactggt gaaatctctt taatatcttt
      961 taaaggtaaa tgctctaacc attgttcatt catacaaaca ccttccaatc tacttacttt
     1021 atactataat attgcctaat taggatgatt taatcttaaa aacgttattc aaacttgcgt
     1081 caattttcaa aactttttag ttttaactag gaaattatgt atggaaatgc tagtctatta
     1141 aaagaatata tttcacatat attaagttga gaatagtaag cctcaaatat aatgaaatag
     1201 gagcatactc atgtacaaat taattaaacc tttcttattc aaaatcgaac ccgaaaaagc
     1261 acacggacta actatcgatg cattaaaaac gttacaaaag tttccggttt tattcccagt
     1321 cgtcgataaa ctatttactt ataagaatcc aacgttatca caaacgatac aaggtaatac
     1381 gtacgacaat ccaattggct tagcagctgg tttcgacaaa tcttgcgaag taccaaaagc
     1441 attggaacac cttggattcg gtgctttaga attaggtggt atcacaccta aacctcaacc
     1501 gggtaaccct caaccacgca tgtttagatt attagaagat gacgccttga taaatcgaat
     1561 gggcttcaat aatattggta tgaacaaagc actaagtcat ttgcgtaaaa atgcttatca
     1621 agtacctgtt ggtatcaatg ttggtgtgaa taaaatgaca ccttatgaag cgcgttatca
     1681 agattatata aaggttattg atacgtttaa acacgacgtt tcatttttca cagtcaacat
     1741 cagttctcca aatactgaaa atcttcaaaa cttccatgat aaagatgaat tttcaatgtt
     1801 atgccaagct ttaacagcat ttaaaaaaca acatgatgta acagtgccaa tttatttaaa
     1861 actaacgtct gatatggatt tcgatggctt aaaagcacta ttaccagcga ttactgagac
     1921 atttgacggt atcatcttag caaacacaac gcgacaacga gatggtttaa cttctgctaa
     1981 taaagtcgaa gaaggcggtt tgagtggtcg tccattattt gaacgtaatt taaaattgat
     2041 taagtatgct tatcagcaaa caaatggtga atttttaatt ataggtacag gcggcgtatt
     2101 cagtactgaa gatgcaatca aaatgatgcg tcacggtgcg tcacttattc aaatttattc
     2161 atcacttgtt attgaaggcc caggtttaac taagaaaatg aacaaaggca tcgcacgtta
     2221 cttaaaagat catcattttg acaatgtcag tgatattata ggactagatg cctaatccaa
     2281 catagtcaaa taatacttta aaacttgctg aatcgtctta ttaaaattat gatataactc
     2341 aagaagatat atttatcacc atttttcaaa ataatggctt aaatatcaca tatcattaaa
     2401 tatagcgttt tataacggag gcgtttgtta tgactaaaga aacagataat aaaaaaacag
     2461 tagcgacttc tgacaacaaa gacacacagc aacaaaatca acctgaagaa gatgaacgtc
     2521 aaggtttgaa tggttatcgt aaaacagatc ttgatttaga aatcgagcaa gagctacgtg
     2581 aaatgatgaa aacaggagaa aatgaaacga aaaatgacta taaaaagttt aaagtgtttt
     2641 cacttatttc aacacttgtc attgtcattt tagcaattat aagatttgtt cataaaatga
     2701 tgtaattaga gtgagacatt gttttatgtc tcaggatcca gttattcatt atatctacaa
     2761 tatttacgat tatataaata acccgagatt ttagtatgat tcatttcact aaaatctcgg
     2821 gtttctattt gataattttt aatgggatat ggcatgtata cgttcttgcc ttttatctca
     2881 tttccaatga ttaatctgga tattgttcta aaaatgcttt cgcttcttta ttaactgttt
     2941 taaaatcaat accttgttgc atcgctgcaa agacacatcc acaataacac tgcctaaaga
     3001 tattatagtc attacacatt tctatggaac gctcataacc tttacttttc ttaaaatcac
     3061 ttggcaaata gttcacatcg tatatttttt ggacatccat accaagttca ttgattaatt
     3121 gtgcgttctt tttaggtgat aatgtgattg cactgccaaa ataatcatag ccatgttcta
     3181 cagctgcttt cgctacaata tccaaacgca tttcaaaaca agcggtacaa cgtaagccgc
     3241 cttctttttc atcagctaat tctttatcct tcaccatttt cacaaactta tgcggttcat
     3301 aaggtgcttc aatatacttc acattcgcac cagtcttgcg attaaaatct tccacaaatt
     3361 gttcttgcac tttagcacgt cgtaagtact catttttcgg atgaatattt gaattcgcga
     3421 aataaattgc aatgtctgca tattgtgtta aaaactctaa tgtatatgta ctacaaggtg
     3481 cacaacaact atgcaataag attttaggtc tgattgcttc tctttcccac tgcccgatta
     3541 atttcttcaa caccttgtca taattaattt tttgattttt cattttactg ataataggtt
     3601 cagcattaat catgatttaa cctcccacat ttaatcatta acttctatta tatatgattc
     3661 atattaaatg tcagtcaaaa aagttagaaa ttcattttaa tgcatttata tttcgaaaat
     3721 cccttatgta tctaaaagca ttttttaaac ttgaatttta aaacactaaa caacacatac
     3781 gtctctgtgt cattttcatt ttttgtatgt catatatatg tttacttcat ttaaatcaat
     3841 ttcatcttat aatttatcgt gtattttaca aaagattgac ttcaattcat cgtaaaagtt
     3901 atacttttgc cattttttaa tgtaacatgg tgttagtaat aaaaataata cattgaggtg
     3961 ttttacatga cagcattatt cccttatatc gcttttgaaa attcaaaaga agcccttgca
     4021 tattacgaag aagtatttgg tgcaactgac gttaaacgtt tagaagttgg cgaagaacaa
     4081 gcgtcacatt tgggtatgac taaggaagaa gcgcaagaag caactatgca tgctgaattt
     4141 gaagtgcttg gcgtaaaagt gttatgttct gattcttttg gtcgcgctga caaaattaat
     4201 aatggcatat cattattaat tgattatgat gttaacaata aggaagatgc tgataaagtt
     4261 gaagcattct atgagcaaat taaagatcat tcttcaattg aaatagaatt accgtttgct
     4321 gaccaattct ggggtggcaa aatgggcgtc tttaccgata aatacggtgt tcgttggatg
     4381 ttacatggtc aagactatac tgcaatccaa caataatgtt attgataaag atatcattta
     4441 ataagcttat gttatttagc aaggcaagcc actctcgatt catggcttgc cttattttat
     4501 tgtatatttt taattatcgt tgctggccct tgattgacaa tcgtattaaa atgccttatt
     4561 aagtcaactt tgtctatacg gtttggatct tctacccaat gtcttataaa agacaatccc
     4621 gcacctgaaa cataactcat gaaataagaa aatggtatac cattaatttg atcattttca
     4681 tttttataac gttgtaaatg acacataatt aaatcataaa gtttttcgtg gatatttgaa
     4741 tctttaccca tacgaaacat caattgataa aatgcgatgt ctttttctat catttctatt
     4801 aaaacggtca taatttgatg tatgttatcc gtggataact taactgctcc atttaacttc
     4861 tcatcatgaa tgaagtctct tatttcctcc aactgctggt cctctaattt ttcaagcaaa
     4921 tcatacttat cataataatg cgtataaaat gtactacggt taacatcagc taaatctgca
     4981 atttgttgca cagtaatctc ttctaattgg tgttgatgta aaagttcaat aaatgcattt
     5041 ctcattgcaa cttgtgattt tctaatacgt cgatctatag tcatttatat caagtcctcc
     5101 ccaatgatta taaacgttat gttcattatc ccacaaatct ccaacattga tgattggtac
     5161 acaatgttta cctgtttaat ataggtgata caaacaaaca gaaaaaggtg ataacaatga
     5221 accaacattt actaggaaat ccaaaattaa ctgtaactca tgtcaatgaa gttaaagccg
     5281 gtattaacca catcgttgtc gacagtgttc aatatggaaa tcaagaaatg attatggaaa
     5341 aagatgtcac tgtggaaatg cgcgatggcg aaaaattata tattaatatt ttcagaccaa
     5401 ataaagatgg caaattccct gtagttatgt ctgcagatac ttacggtaaa gataataagc
     5461 ctaaaatcac aaatatgggt gccctttggc caacattagg taccattccg acatctagtt
     5521 ttacacctga agaatcacca gacccaggat tttgggtgcc aaatgattat gttgtagtta
     5581 aagttgcatt acgcggtagt gacaaatcca aaggcgtctt atctccatgg tcaaaaagag
     5641 aagcggaaga ttattacgaa gtgattgaat gggcagcaaa tcagtcatgg agtaatggaa
     5701 atatcgggac aaatggtgtt tcttatcttg cggtgactca atggtgggtc gcatcattaa
     5761 atccaccaca tttaaaagca atgattcctt gggaaggctt aaatgatatg tatagagaag
     5821 tagcctttca cggaggtata ccagatactg gcttttatcg tttctggact caaggtattt
     5881 ttgcgagatg gacagataat ccaaatatcg aagatttgat tcaagcacaa caagaacatc
     5941 ctctgttcga tgatttttgg aaacagcgtc aagtgccatt atcacaaatt aaaacacctc
     6001 tactaacatg tgctagttgg tctacacaag gtttgcacaa ccgtggctct tttgaaggat
     6061 ttaaacaagc tgcatctgaa gaaaaatggc tatatgtgca tggacgtaaa gagtgggaaa
     6121 gttactacgc tagagaaaat ctcgaacgcc aaaaatcatt ctttgatttt taccttaaag
     6181 aagaaaataa cgattggaaa gatacgcctc atgtcattta tgaagttaga gatcaatttt
     6241 ataaaggcga attcaaatca gcgtcagcgt tccctttacc taacgcagaa tatacaccat
     6301 tgtatttgaa tgctgaaaat cacacattga atcatgcaaa gattagtagc gcgcatgtcg
     6361 cacaatatga ctctgaagat aaacaacaag atgtaagttt taaatatacg tttgacaaag
     6421 atactgagtt agttggaaac atgaacttaa aactatgggt aagcactaaa gactcagatg
     6481 atatggattt atttgcaggt attaaaaagt tagatcgtcg tggtaatgaa gttaacttcc
     6541 ctgattttaa tcatattgaa aatggtcaag tagctactgg ttggttacgc gtatcacatc
     6601 gtgaattaga tcaagaaaaa tcctcaatcg cgcaaccttg gcataaacat gaaacagaat
     6661 taaagttgtc acaagatgag attgtacctg ttgaaatcga attgttacct tcaggcacgc
     6721 tatttaaaca aggcgaaaca ttggaagttg ttgtaaaggg tagtgaaatt gtaattggta
     6781 atagtactcc tggcatgaaa acacgttatg aacatgaaga aaccgtaaat aaaggcatgc
     6841 acatgattta tactggtggt aaatatgatt cacaattaat cattcctatc gttaattgat
     6901 atgcagcaat tacggtcgct tttgattaaa agtgacatag tgataggact gtataacaag
     6961 agaaagccac acgcttggaa tcttaaacca aggtgtggcc ctttttatta ttgatggcta
     7021 tttaatttta taacactatc gtattttctt tttcatgaat catttcaata atgacattat
     7081 cttcattcat tactgctact ttaggtgcat ggtttttaat ttcttcttca ttcaactgtg
     7141 cataagtcat gattatgact acatcgccta cttcaacaag tcttgacgct gcaccgttta
     7201 aacaaatttt accactacct ctttcaccag ctattacgta tgtttcaaaa cgtgcaccat
     7261 tattattatt cacgatggct actttttcat ttggcaagat gtctaccgct tccaatatat
     7321 ctgaatcaat cgtaatgcta cctacataat ttaaatttga ctcagtcact cttgctctat
     7381 gaattttagc attcatcatt gttcttatca ctttattcag ctccaattat tatattatct
     7441 attaaacgcg cttttgaaaa tttaacagct aacgagataa atatgcgtcc agttatttcg
     7501 tgttgttcta ctaattgagg ataactataa acagcaactt cttcaatgcg tccacttata
     7561 tgtgattcaa gatattcagt aaccctgtct ataattactt tactttgacg ttcaccgtct
     7621 tgatacaacg cttgtgctaa tagcaaactt ttacttaaat gtaccgcttc ttgtcgttct
     7681 tgctccgtta aataaacatt tcttgaactt ttcgccaaac catctgcttc tcgaacgata
     7741 tcaataccaa taatttcaac ggcatgattg aagtctttta ccatttgctc gacaatagcc
     7801 aattgctggg catctttttt accaaaataa gcataatccg gcataacaat attaaatagc
     7861 ttattaacta ctgttaccac cccatcaaaa tgccctggac gcttcgctcc ttctaacaca
     7921 tcagctaatg ggcctacttt gacatcaata cctaattcac ctggatacat atcttctact
     7981 gcaggatgaa aaacaatgtc cgctcctact tctgatacta attctaaatc tttatcaatt
     8041 tgtctcggat aagcatcgaa atcttcgttt ggaccaaatt gtaatggatt aacaaataca
     8101 ctcacaattg taatatcatt tgtactaact gattcgcgta ccatcgttaa atgtccatca
     8161 tgtaaggcac ccattgttgg gataaaacca atcgttgtgc ctgagcgttt ggctgcttta
     8221 acaatgtgtt gcatctcttt taccgtagta atcagcttag tcattgttat taacctcatt
     8281 cataattttc tttttatacg tatattcttc tgatggaaat gcaccagatt taacttcttg
     8341 atcgtattgt tttaaaccat ccacaccaac actaaaatca gcaaattgct tcacaaattt
     8401 cgctttatgt tcaacaccat aatttaacat atcgtgataa accaatactt gaccatctgt
     8461 accttttcct gcaccaatac caatgactgg aattgttaag tgcttgctaa tttcttctgc
     8521 taaatcattt ggaattgctt caagtactaa cgcaactgca ccagcttgtt ctacattttt
     8581 cgcgtctaaa ataagttgct ccgctgcttc tttcgttgca ccttgtaatt tataccccat
     8641 aacgccaaca ctttgaggtg ttaatcctaa atgtgcaaca acaggaatac caattgccgt
     8701 tgctttttca ataaatggtg taatatgcgc tccttctgct ttaattgcat ttgcattcgt
     8761 ctcctgataa agctttagag catgatttaa gtcttgtgtc atagagatgc ctactgcacc
     8821 aatcggcata tcaacaacta caaatgtatt tggtgcgcct cttcttactg cacgaccgtg
     8881 atgaatcata tctgctaacg tcacttgtac ggtactttca taacctaata cagtcatacc
     8941 aagtgaatcc ccaacaagaa tcatatcaat acccgctgct tccacttgtt tagcacttgg
     9001 aaaatcataa gctgttacca tagaaatttt agtttgcttt tgtttcatat ctattaattg
     9061 acttactgtt ttcaatgtta ttcaacctct ttttgcagta ttattagaaa tagtataatg
     9121 aatcttttat agaaaggaaa gaagaagatg ttatcagttg cgattatcgg cccaggcgct
     9181 gtcggtacaa ctattgccta tgaattacaa caatcattgc ctcatacaac gcttatcggg
     9241 agacacgcca aaacaataac atattatact gtaccacatg cacctgcaca agatattgtt
     9301 gtgaaaggtt atgaagatgt cacaaacaca tttgatgtta ttattattgc agtcaaaaca
     9361 catcaacttg atgcagttat tcctcattta actcatcttg cacatgagga cacgctcatc
     9421 attttagccc aaaatggtta tggtcaactc gaacatattt catttaaaaa cgtatgccaa
     9481 gcagttgtct atataagtgg tcaaaagaaa ggcgatgttg ttacgcactt cagagattat
     9541 caattacgta tacaagataa tgcattaact cgacaattta gagatttggt ccaagacagt
     9601 caaatcgaca ttgtattaga agcaaatatt caacaagcta tttggtataa attgttagtt
     9661 aacttgggca ttaattctat cacagcactc ggtagacaga ccgttgcaat catgcataat
     9721 cctgaaatac gtacactgtg tagacagcta ttactagatg gttgtcgtgt tgcacaggca
     9781 gaggggttaa acttttcaga acaaactgtc gatactatta tgactatata tcaaggttat
     9841 cccgacgaaa tgggaacgag catgtattac gacattgcgc atcagcaacc tcttgaagtc
     9901 gaagcgattc aaggctttat ttatcgacgt gcacgtgaac acaatcttga caccccatat
     9961 cttgatacta tttatagctt tttacgcgcg tatcaacaaa atatgtaagc acatatataa
    10021 tataaaaaga ccttaacgat gcatttagaa ccacctgttc ctaatatcgc taaggtcttt
    10081 taattatatt agactattca gcttctctaa tttcttctgc cacatcttta tagtctattt
    10141 tcgctttaac aaacgtctcg ttatttaccg ggaaatgttg ttggaatgtt tcaaagtttt
    10201 gtatctcaac gacaacgtca tccacttcaa agtcaagaac atgtccacca taagctcttt
    10261 catcatccgc aaaatgtata tgaaaaccag cagaccctac gccatgaaat aattctggtg
    10321 taaaaaatcc aacaatggca ccacgaatat cttgtctttt ttcctcaggt tgtctgcgtg
    10381 ctgaatcaat caaacgtgta tatggcggtt gctgagcagg catcattcgt acatgcatat
    10441 gtttaaatgt gccataaatt ttaacagccg aaaataaatt ctcacttaac atttcatttt
    10501 taatttgtgc aaatacatca tcttgtgata attgttgcaa tggaaatgtc ttactcgctt
    10561 taaaattagt aatcgatgca tacggtactt tctcatcgcc ttttaattct ataaattctt
    10621 tatgctcgtt agcatgatat gcctttccgt ctaaaaatat tacttcgcca tcagaccctg
    10681 ttaacgttgc aatccctaaa ttcccatgtt ctaacaattc attaattgta gctgtgcctt
    10741 ctagtaagcc agccattaac gtacctaatg taccatgttg atacaagaca ttcgtcattc
    10801 caaaaccatc tccctatagt tattcctcgt tgtcatgctc tacttcgtga ttaatgcaga
    10861 actactttcc tttatactca atgacgcctc aacattttta ttcatgtcac taaattttca
    10921 cgagtcataa tactttattc aattattatt ttacgcaaaa gtattgcctc tatcaatgct
    10981 tgctaaaaaa atggacctat cagtgccacg tgttactgca acactaatag atcctcttac
    11041 cattaatata tttctaatta atacttaaaa taggcttagt cttctaataa atatttaatt
    11101 gaatcaaatg tatcttctaa tgttttaaca gatttatcga acaacgcttg ttcttcggca
    11161 cttaatggca tttcataaat tttaactgcg ccatgttggt taactaatgt tggtacacct
    11221 aggtaaacgc ctttgtgacc accatattga ccatctaatt gtatagaaac atttaagaca
    11281 ttattttcat tatttaaaat ggcttttgaa atgcgcatca atgctaatgc aataccatag
    11341 tatgttgacc ctttagcttg gataatttca taagcagcgt cacgtgtatt cacataaatt
    11401 tcttccgctt tagcttcgct accagtttgt tcttttaatg tgtcatatac tgaaatacct
    11461 gctacatttg cttgtgacca aactgcaagt tcagtatcac catgctcgcc aataatacta
    11521 gcgtcaacac ttgaaggtgc aacaccaagt tcttggctaa ttaaatattg taaacgtgca
    11581 ctgtccaata cagtacctga accgataaca cgctctgctg gtaatccagt atattctttt
    11641 acaaatcttg ttaaaatgtc tacagggttt gccgcgatta agaaatatcc atcaaagcca
    11701 ctatccataa cactcttaac gatgctcttc ataatcttag tatttttttc aactaattgt
    11761 aaacgtgttt cacctggctt ttgaggtgca ccagctgtaa taacaactaa atctgcatct
    11821 ttacagtctt cgtattcacc tgctttcaca tcaactggtg aaggactgtg gactgtacca
    11881 tggtttaaat cttgaacatc tgcttttact ttgtcttttg caatgtcaat aattacaaat
    11941 tcatcagcaa caccttgcgt aaccattgca aaggcatagc ttgatcctac agatccatct
    12001 ccgattaata caaccttttt accaaatgtt ttcataatta tgtctcctaa cctaattgaa
    12061 tttattttac acgtgactac acgtaaaaat atctatactg aaattaaaga ttaacaattt
    12121 tattttatta taatattatg ctaccaaatt acaaacataa aactgagatg taagcggagt
    12181 caaattacac tctatcgcca ataaatattg atatctcaag ctttagcacg taatttgaaa
    12241 tttgtgacaa tttttagcat tctaaaattg cgtaacgacg ctatttaaag gctttaacaa
    12301 actattgagc tttctatttt tttcatttta aaaaggatgg ctattcgact taaatgactt
    12361 actatataac ctcctatttt ccgccttacc ctcatcatat ttgatgcatc attttatagt
    12421 caaagaatta catttcatac aaactagcca atcagacata aacatgaaat tgattttaaa
    12481 aatataatgt gcaaaattgt tagaaaatta gcaaaaaaat agtacttatt catttaatat
    12541 ctgttataat cagttttatc atttaaaaaa tctatggatg ttatcaagac aagtcattaa
    12601 tacgtaacat aaagttgtga tttttcagaa tttttagaca aaatattgat tatttgtgct
    12661 atgatataac atattaaaaa acaccgtata gaattgttta tgaatgtttg ggaggaaagt
    12721 ttatgggaag ttttttcaat aaaatagcac gaaaagagga tccggctatc tatcaaaata
    12781 aagatggtca tttaaagcgt acacttcggg tgcgtgattt cttagcttta ggtgtaggaa
    12841 caattgtatc gacatctatc tttacgctac ctggcattgt tgctgcagaa catgcaggac
    12901 cggccgttgc gttatcattc ttactcgctg ctattgttgc tggtttagtt gcatttactt
    12961 atgcagaaat ggctgccgct atgccatttg caggttcagc ctattcttgg gtcaatgtat
    13021 tatttggtga attttttgga tgggttgccg gttgggctct attagctgaa tattttatcg
    13081 ccgtagcctt tgttgcatca ggattctcag cgaatttacg cggacttgtg aaaccaattg
    13141 gcatcgaatt acctgcagca ttatcaaatc catttggtac aaatggcggt tttatcgata
    13201 ttattgctgc tatcgttatt ttattaactg cattattact atcacgtggt atgtcggaag
    13261 cagctcgtat ggaaaatatt ttagttattt taaaagtatt agctattatt ttatttgtca
    13321 tcgtaggttt aacagcaata aatgttagta actatgtgcc atttattcca gaacacaaag
    13381 taactgctac aggtgacttt ggtggatggc aaggcatata tgctggtgtt tcaatgattt
    13441 tcttagcgta tatcggtttc gattctatcg cagcaaactc agcagaagca cttgatcctc
    13501 aaaagacaat gcctagaggt attcttggtt ctttaagcgt tgctatcgta ttatttattg
    13561 ctgtagcact tgtgttagtt ggtatgttcc attactcaca atacgcaaac aatgctgaac
    13621 ctgttggttg ggctttacgt caaagtggtc atggtgttgt agcagctatt gttcaagcta
    13681 tctctgttat cggtatgttt acagcattaa ttggtatgat gttagcaggc tcacgtttac
    13741 tttattcatt tggacgtgac ggcttattac cttcatggtt aagccactta aacgacaaac
    13801 atttacctaa tcgcgcacta gttatactta ctattattgg tgttttaatt ggttctatgt
    13861 tcccattcgc atttttagca caattaattt cagcaggtac acttgttgca tttatgttcg
    13921 tttcattagc aatgtatcgt ttgagaaagc gtgaaggtaa agatctacca attcctgcat
    13981 ttaaattacc tttatatcct gtgttaccag caattacatt tgttttagta ttgctagtat
    14041 tctggggatt aggattcgaa gcgaaattat acactttaat ttggtttatt gttggtatca
    14101 tcctatattt aagttatgga cttagacatt ctaagaaaaa tgacgtagct gaataccacc
    14161 caccaaaata aaaaataaaa aaaatcattt cccatctgat taacatccag atgtggaaat
    14221 gattttttat tttatattaa gataatcgct attaccaacc ttgtccagat atgtcatatt
    14281 gatctaagtt acctgcttcc aaagcagtca gtgcatcttc tatagtgttt aacgccgtgt
    14341 ctaattgctc atatgttatt accaatggcg gttggaatcg caacacattt cctgctacag
    14401 ctataataac tacgccatgc tcaaagcagt aattacaaat tttaagtgcc gcactggcat
    14461 cacgtgtttt gagttttttg tcggaaacaa tatcaatacc aatgctcaga cctttacctc
    14521 taacatcgcc tacactattg tatttagata cccattgatc cattcgtttc ctaacatatt
    14581 cccctttttc cgcactagcc tgaagaagcg actgatcttc aatcatttga attgtggcta
    14641 atgcagcttc acaactaact ggattagcac ctgttgtaaa taaatgtgct ggtgcttcta
    14701 aacaattcat aatctctttg cgtccaacaa ttgctgacat aggcatacca cctgctaagg
    14761 attttccgaa agtgattaaa tcaggcgtaa aattaaaatg cgagactgaa ctccatgtac
    14821 ctgttctccc aaaaccttgt tgaatatcat cgacagcgat taaaatacca tgttcacgac
    14881 aaatcttttc taacgcttca aaataccctg gaactggttc taaaaatcca ccatcgcctt
    14941 gtatcgtttc aataacaata catgctactt cgtcagcagg tacatacttc gcaaacattt
    15001 cttttaaggg tgctaaatat tcttctactg aattagcttg tggctgctcg tacataccac
    15061 gatatttatc tggaaacgga atatgataaa aaccattcaa taacggacca taatgtttgc
    15121 gcatatttaa actaatagct gacatagaca atgagccaaa agttgaacca tgatatgcat
    15181 tagtgaaact aatgatataa ggacgccctg tatatgctct ggcaaattta atgatgccat
    15241 catttgcgtc tgatccggtt aatccgaagg tcactctttt ttcaaaatct ccaggtgcaa
    15301 tctcacaaag cttcttagct aaacgtacca acggttcatg atacatatat gctggtgtat
    15361 aatgaataaa tttatcaact tgtgccttta tcgcttctgt tacttctcta ggtgcatgac
    15421 ctacgttttg agaactcgca ctcgataaca aatcgatata tgtcttcccc tcaatatcaa
    15481 ccaatgttgc tccatatcca tgatcaatca ctaacggata atatttaata cgtcctgatt
    15541 tcgcaaaata atgttcatcc tcttgaatta attgatgtgc tttactcata tacattcccc
    15601 tcccattgac agtattaatg tgcaagcaaa gtggcctctc ttaaatcgat tataaaatcc
    15661 gatttaaaat cctgctcaaa taccgtcatg cctctatgaa tactatccaa tatactaata
    15721 aaattcagat ttgtaaatat attctgataa ttaagaattt tatatcaatc tactttgttt
    15781 atgcgcataa ttttgttcga ttagggaatt gtttactata ttccatttga ctctgaggtg
    15841 atacgaatgc gtttaaaagt attgttccat ttcattgctg ctattttcat atcattcatg
    15901 ttgctatgga tgaccatgtt gtttgactta ataagcaatc aatcacattt aaaagcttta
    15961 ttattgaatt tagattttct aattccttct gacaatacac catatattct agaaataata
    16021 tgtcacttac taattggtag cgtcatttat tttgtatttg tgttgctgtt tcatacttct
    16081 aaaaggcttt actatctatg ttatatccct ttatttttct tatttatagc attgtatccc
    16141 tttttagtat ttattgcgca acgtccaatt tttcaattta gtgtgacaga attaatcggt
    16201 tggattatta cacatatttt ctttatgtca ttaatggcgt tagtcatacc tagaataaaa
    16261 taatattttt aattaaactg acaattattt ttcacatttt atacactttt caaggtttat
    16321 gacttgagaa atgttctcat ttttatcata ctggaggtgt attgaaaagt taaggagtgg
    16381 aaagtatgaa taaagagcaa ttagaaaaaa tgaaaaatgg aaaaggcttt attgccgcat
    16441 tagaccaaag tggtggtagt acaccaaaag cacttaaaga atatggtgta aacgaagatc
    16501 aatatagcaa tgaagacgaa atgttccaac ttgttcacga tatgcgtaca cgtgtggtaa
    16561 cttcaccttc attctcacca gataaaattt tgggtgctat tcttttcgaa caaacaatgg
    16621 atcgcgaagt agaaagcaaa tacactgcag attacttagc tgataaaggt gttgttccgt
    16681 tcttaaaagt agacaaaggt cttgctgaag agcaaaatgg tgttcaatta atgaaaccaa
    16741 tcgacaactt agacaattta ttagaccgtg caaacgaacg tcacattttt ggtacaaaaa
    16801 tgcgttctaa cattttagaa ttaaatgagc aaggtatcaa agacgttgtt gaacaacaat
    16861 ttgaagttgc taaacaaatt attgctaaag gtttagttcc aattatcgaa ccagaagtta
    16921 atattaatgc aaaagacaaa gctgaaattg aaaaagtatt aaaagctgaa cttaaaaaag
    16981 gtttagatag cttaaatgct gatcaattag taatgttgaa attaacaatt cctactgaac
    17041 caaacttata caaagagtta gctgaacatc ctaatgttgt tcgtgtcgtt gtattatcag
    17101 gtggttacag cagagaaaaa gcaaatgaat tacttaaaga taacgctgaa cttatcgcaa
    17161 gtttctcacg tgcattagct agtgatttaa gagctgatca atctaaagaa gaattcgata
    17221 aagctttagg tgatgctgta gaatcaatct acgacgcatc tgtaaacaaa aactaattta
    17281 tacattaaac tattttttga tataaactac taaaaaggac tcatacatgt gctttaaagg
    17341 cattgtgtat gagtcttttt tgattaaagt tgattttgcc gtatgtatta gattacgtaa
    17401 aaaaatcgga cagctgaaaa atctttaaga tttctcagtt gtccgatttt aaatatagct
    17461 attagaattt agttttcgta gtaacctaat tctaagtctt ttgaagtttg tttacggatt
    17521 tttctcatta atttttcgtc ttcaattaat gattcaccgt atgatggaat cattttctta
    17581 attttaggtg cccattcagt tttgtattca gggaagttac gttctaatac ttctaacgca
    17641 actgaaactg aagttgaagc ccctggtgat tcacctaata atgcaattac agtgtggtct
    17701 tgtgagttaa ccacttctgt accgaattgg atgaatcctt taccgtgttc aggtgtatct
    17761 ttgataactt gtacacgttt accagcagtg tataattgcc aatcttcatt acgtgcttct
    17821 ggatagaaag tacgtaagtg gttcatacaa ccttcttttg tcataattac ttggtcaaat
    17881 gagtatttaa ttaaaggtaa gtttttaact gctgctgcta ataaagttgt aatgttgtat
    17941 gttttaacag acttgaataa atctaagtta gaaccatttt tcaagaattt aggtccaaca
    18001 ttagcaaatg gtccaaataa taatgttctt tgaccatcaa tgtaacgcgt atctaaatga
    18061 ggtacagtca ttggtggtgt accaggtggc tctttaccat aaactttggc atcgtgttgt
    18121 tcaataactt gtgggtttgt acaagctaag aattgaccac tgatagggaa tccacccaaa
    18181 tgtttacttt cagggatacc tgttttttgt aataatggaa ttgctccacc gccagcaccg
    18241 atgaatacgt agtcagttac ttgtttgaat ttctcaccag ttaggcgatt tttaacagta
    18301 acttcccatt gaccatttga taattgttca aaatcaacaa cttcatggtt aaattgcact
    18361 gtagcatttg gatgtgcttc aatgctttta gccattttac gtgttaattc accgaagttt
    18421 acatctgtac cttcgtcaat tttacttgcc gccatgatac cagggttatc ttcacggcct
    18481 ttcatcatca atggaatcca ttttttcatt acttcgatgt cttcagtata ttcgatatta
    18541 tcgaacatag ggaaagcttt catcgcttcg taacgatctt ttaagaattt aacattgttt
    18601 ttacctctaa cataactgat gtgtggtaat ggattgataa attctcttgg gttctcgatg
    18661 ctaccgcttt tcactaagtg accccagaat tgttttgaaa tctcaaactc ttcgttaatc
    18721 actttcgctt tttcgatgtc gatagaacca tcaggttgta aaactgtgta gttcaactca
    18781 cataatgctg catgacccgt accagcatta tttctttcgt ttgaactttc gattgcagga
    18841 cgatccaagc gttcgtaaac gtggatattc cagtctggct caatttcttt taacattgaa
    18901 ccaaatgttg tgctaagtac accggctcca attaaaacga tgtctttact attagactta
    18961 gccattggtt tcacctctcc aaaaattgta aatgtgtatc atcaatatga aagttacata
    19021 aaactgacat atttctttaa aatatcaacg ccattgataa cttcctgttt taattgatac
    19081 gctgtaacaa aatactatag ttagtgctta catgtatatg ttaaagcaag cagtggtaaa
    19141 tgtaaattat aattattcat taactttgca atatattaaa tcttttattc atagaagata
    19201 aatatcaaat caatcataat tatttgacaa caaatagcta acgattgttt taatctacat
    19261 ttggcttata gcattttaaa cctatactct attttgatac aatataagtg taaaatcaat
    19321 cataaaaagg atatt
//
LOCUS       DALPQQ010000043        19118 bp    DNA     linear   BCT 22-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus strain K18-6-464
            SAMD00233528-rid16434743.denovo.043, whole genome shotgun sequence.
ACCESSION   DALPQQ010000043 DALPQQ010000000
VERSION     DALPQQ010000043.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMD00233528
            Sequence Read Archive: DRR236061
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 19118)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 19118)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001543423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001543423.1
            Genome Coverage       :: 77x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/22/2022 17:09:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,811
            CDSs (total)                      :: 2,743
            Genes (coding)                    :: 2,689
            CDSs (with protein)               :: 2,689
            Genes (RNA)                       :: 68
            rRNAs                             :: 2, 4, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 4, 2 (16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 54
            CDSs (without protein)            :: 54
            Pseudo Genes (ambiguous residues) :: 0 of 54
            Pseudo Genes (frameshifted)       :: 27 of 54
            Pseudo Genes (incomplete)         :: 27 of 54
            Pseudo Genes (internal stop)      :: 10 of 54
            Pseudo Genes (multiple problems)  :: 10 of 54
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..19118
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMD00233528-rid16434743.denovo.043"
                     /strain="K18-6-464"
                     /db_xref="taxon:1280"
                     /geo_loc_name="Japan: Niigata"
     gene            <1..298
                     /locus_tag="O7798_001242"
     CDS             <1..298
                     /locus_tag="O7798_001242"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501237.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="DUF1433 domain-containing protein"
                     /protein_id="HDC2863509.1"
                     /translation="QQERITLYLKHNTKEPNTIKTVHFTSLKRGPMGDAVIEGYINEN
                     KEDDFVAYGSPEHNYQFGGSLIKSKNLSTLLKPVHQTKSPDEIKKELESKKNDR"
     gene            565..984
                     /locus_tag="O7798_001243"
     CDS             565..984
                     /locus_tag="O7798_001243"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501235.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1433 domain-containing protein"
                     /protein_id="HDC2863510.1"
                     /translation="MSKKKILILTSIMLIILISVAGIYLKVKYDEKEKQKAIYYKEQQ
                     ARITLYLKHNTKEPNTIKSVHFTNSETSPMGSAVIEGYINENKKDNFTAYATPEHNYQ
                     FGGAMIESEKLSELLKPANQLKSPDDIKKELNKKKSH"
     gene            1002..1421
                     /locus_tag="O7798_001244"
     CDS             1002..1421
                     /locus_tag="O7798_001244"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501234.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1433 domain-containing protein"
                     /protein_id="HDC2863511.1"
                     /translation="MSKKHVFIIIGVILCICTVSTVMHFKMKYDEKEKQKAIYYKEQQ
                     ERITLYLKHNTKETNTIKSVHFTNLETSPMGSAVIEGYINENKEDDFTAYASPEHNYQ
                     FGGAMIKSEGVDKLLKPAHERKSPEKIKEELDKKEGH"
     gene            1873..2295
                     /locus_tag="O7798_001245"
     CDS             1873..2295
                     /locus_tag="O7798_001245"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501233.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxymuconolactone decarboxylase family
                     protein"
                     /protein_id="HDC2863512.1"
                     /translation="MPYNYKKQNGELMSVMSQGEKFIHQSPVNDELSALIKLLISKIN
                     GCHYCVDIHKKELKELGVTQMKIDEVLSFRHLDLFTDQEKVTLEFAEMLNSIKDFKKF
                     EIIDRLKSFYDEEQIIDLVFVVNQINGWNRLNIISDRL"
     gene            complement(2407..3945)
                     /locus_tag="O7798_001246"
     CDS             complement(2407..3945)
                     /locus_tag="O7798_001246"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501232.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AbgT family transporter"
                     /protein_id="HDC2863513.1"
                     /translation="MTSKHQQKGSIVNRFLNSVEKIGNKLPDPSVLFFLMCVGLAIMT
                     WVISLFNVSVKHPGTHQTIYIKNIISHDGFTMIMNDTIKNFSEFPALGLVLAVMIGIG
                     VAEKTGYFDKLMISVVNRAPRFLILPTIILIGILGSTAGDAATIILPPLAAMLFIKIG
                     YHPIAGLTMAYASAVGGFAANIVVGMQDALVYSFTEPATRIVSDSIKTNVAMNWYFIA
                     ASVVVLLPTILLVTTKLIIPRLGKYDDSLMHDDHEETSSHITDKEAHALKWANISFIV
                     TIILLIITAIPEHSFLRNAKTGSLLDDAPLINGVGLIILVVFLVPGLVYGILSKEIKN
                     TKDLGKMFGDAVGSMGTFIVIVFFAAQLLAYLKWSNLGIIAAVKGAKLLEHQNGIVLI
                     LGIIVLSAMVNMLIGSASAKWGILGPIFVPMLILIGFHPAFTQVIYRVGDSITNPITP
                     MMPYLPLLLTYAQKYDKRMKLGALLSSLMPYSIALSIVWTVFVIIWFLLGIPVGPGGP
                     IFVK"
     gene            4178..4996
                     /locus_tag="O7798_001247"
                     /pseudo
     CDS             4178..4996
                     /locus_tag="O7798_001247"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002503368.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
     gene            5259..5624
                     /locus_tag="O7798_001248"
     CDS             5259..5624
                     /locus_tag="O7798_001248"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501230.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDC2863514.1"
                     /translation="MLKEKESFRLLYQAIREIADKIGDNQLETNSVSLLLLDFDFEHE
                     VFDELYLVILKYLNTVSIENISHSELLNLIENTIPEDREINTFVKNKIIIGFANNYFP
                     ELQVLANEIKSDMASSLKQ"
     gene            6491..7312
                     /gene="cntK"
                     /locus_tag="O7798_001249"
     CDS             6491..7312
                     /gene="cntK"
                     /locus_tag="O7798_001249"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidine racemase CntK"
                     /protein_id="HDC2863515.1"
                     /translation="MNRQVIEFSKYNPSGNMTILVHSKHDASEYASIANQLMAATHVC
                     CEQVGFIESTQNDDGNDFHLVMSGNEFCGNATMSYIHHLQESHLLKDQQFKVKVSGCS
                     DLVQCAIHDCQYYEVQMPQAHRVVPTTINMGNHSWKAIEIIYETYVHYVIPVKQVTTE
                     IQHLVEAFVREQQWSHKYKTVGMMLFDEQRQFLQPLIYIPEIQSLIWENSCGSGTASI
                     GVFNNYQRNDACKDFTVHQPGGSILVTSKRCHQLGYQTSIKGQVTTVATGKAYIE"
     gene            7323..8141
                     /gene="cntL"
                     /locus_tag="O7798_001250"
     CDS             7323..8141
                     /gene="cntL"
                     /locus_tag="O7798_001250"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501228.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-histidine (S)-2-aminobutanoyltransferase CntL"
                     /protein_id="HDC2863516.1"
                     /translation="MNNFNNEIKLILQQYLEKFEAHYERVLQDDQYIEALETLMDDYS
                     EFILNPIYEQQFNAWRDVEEKAQLIKSLQYITAQCVKQVEVIRARRLLDGQASTTGYF
                     DNIEHCIDEEFGQCSIASNDKLLLVGSGAYPMTLIQVAKETGASVIGIDIDPQAVDLG
                     RRIVNVLAPNEDITITDQKVSELKDIKDVTHIIFSSTIPLKYSILEELYDLTNENVVV
                     AMRFGDGIKAIFNYPSQETAEDKWQCVNKHMRPQQIFDIALYKKAAIKVGITDV"
     gene            8134..9435
                     /gene="cntM"
                     /locus_tag="O7798_001251"
     CDS             8134..9435
                     /gene="cntM"
                     /locus_tag="O7798_001251"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_096659686.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="staphylopine dehydrogenase CntM"
                     /protein_id="HDC2863517.1"
                     /translation="MSKLLMIGTGPVAIQLANICYLKSDYEIDMVGRASTSEKSKRLY
                     QAYKKEKQFEVKIQNEAHQHLEGKFEINRLYKDVKNVKGEYETVVMACTADAYYDTLQ
                     QLSLETLQSVKHVILISPTFGSQMIVEQFMSKFNKDIEVISFSTYLGDTRIVDKEAPN
                     HVLTTGVKKKLYMGSTHSNSTMCQRISALAEQLKIQLEVVESPLHAETRNSSLYVHPP
                     LFMNDFSLKAIFEGTDVPVYVYKLFPEGPITMTLIREMRLMWKEMMVILQAFRVPSVN
                     LLQFMVKENYPVRPETLDEGDIEHFEILPDILQEYLLYVRYTAILIDPFSQPDENGHY
                     FDFSAVPFKQVYKNEQDVVQIPRMPSEDYYRTAMIQHIGKMLGIKTPMIDQFLTRYEA
                     SCQAYKDMHQDQHLSSQFNTNLFEGDKALVTKFLEINRTLS"
     gene            9578..11176
                     /gene="cntA"
                     /locus_tag="O7798_001252"
     CDS             9578..11176
                     /gene="cntA"
                     /locus_tag="O7798_001252"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501226.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="staphylopine-dependent metal ABC transporter
                     substrate-binding protein CntA"
                     /protein_id="HDC2863518.1"
                     /translation="MRKLTKMSAMLLASGLILTGCGGNKGLEEKKENKQLTYTTVKDI
                     GDMNPHVYGGSMSAESMIYEPLVRNTKDGIKPLLAKKWDVSEDGKTYTFHLRDDVKFH
                     DGTPFDADAVKKNIDAVQENKKLHSWLKISTLIDNVKVKDKYTVELNLKEAYQPALAE
                     LAMPRPYVFVSPKDFKNGTTKDGVKKFDGTGPFKLGEHKKDESADFNKNDQYWGEKSK
                     LNKVQAKVMPAGETAFLSMKKGETNFAFTDDRGTDSLDKDSLKQLKDTGDYQVKRSQP
                     MNTKMLVVNSGKKDNAVSDKTVRQAIGHMVNRDKIAKEILDGQEKPATQLFAKNVTDI
                     NFDMPTRKYDLKKAESLLDEAGWKKGKDSDVRQKDGKNLEMAMYYDKGSSSQKEQAEY
                     LQAEFKKMGIKLNINGETSDKIAERRTSGDYDLMFNQTWGLLYDPQSTIAAFKAKNGY
                     ESATSGIENKDKIYNSIDDAFKIQNGKERSDAYKNILKQIDDEGIFIPISHGSMTVVA
                     PKDLEKVSFTQSQYELPFNEMQYK"
     gene            11189..12124
                     /locus_tag="O7798_001253"
     CDS             11189..12124
                     /locus_tag="O7798_001253"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501225.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HDC2863519.1"
                     /translation="MFKFILKRIALMFPLMIVVSFMTFLLTYITNENPAVTILHAQGT
                     PNVTPELIAETNEKYGFNDPLLIQYKNWLLEAMQFNFGTSYITGDPVAERIGPAFMNT
                     LKLTIISSVMVMITSIILGVVSALKRGKFTDRAIRSVAFFLTALPSYWIASILIIYVS
                     VKLNILPTSGLTGPESYILPVIVITIAYAGIYFRNVRRSMVEQLNEDYVLYLRASGVK
                     SITLMLHVLRNALQVAVSIFCMSIPMIMGGLVVIEYIFAWPGLGQLSLKAILEHDFPV
                     IQAYVLIVAVLFIVFNTLADIINALLNPRLREGAR"
     gene            12121..12990
                     /locus_tag="O7798_001254"
     CDS             12121..12990
                     /locus_tag="O7798_001254"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501224.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HDC2863520.1"
                     /translation="MIILKRLLQDKGAVIALGIIVLYVFLGLAAPLVTFYDPNHIDTA
                     NKFAGMSFQHLLGTDHLGRDILTRLIYAIRPSLLYVFVALFVSVLIGSILGFLSGYFQ
                     GFVDALIMRACDVMLAFPSYVVTLALIALFGMGAENIIMAFILTRWAWFCRVIRTSVM
                     QYTASDHVRFAKTIGMNDMKIIHKHIMPLTLADIAIISSSSMCSMILQISGFSFLGLG
                     VKAPTAEWGMMLNEARKVMFTHPEMMFAPGIAIVIIVMAFNFLSDALQIAIDPRISSK
                     DKLRSVKKGVVQS"
     gene            12987..13802
                     /locus_tag="O7798_001255"
     CDS             12987..13802
                     /locus_tag="O7798_001255"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501223.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HDC2863521.1"
                     /translation="MTLLTVKHLTITDTWTDQPLVSDVNFTLTKGETLGVIGESGSGK
                     SITCKSIIGLNPERLGVTGEIIFDGTSMLSLSESQLKKYRGKDIAMVMQQGSRAFDPS
                     TTVGKQMFETMKVHTSMSTQEIEKTLIEYMDYLSLKDPKRILKSYPYMLSGGMLQRLM
                     IALALALKPKLIIADEPTTALDTITQYDVLEAFIDIKKHFDCAMIFISHDLTVINKIA
                     DRVVVMKNGQLIEQGTRESVLHHPEHVYTKYLLSTKKKINDHFKHVMRGDVHD"
     gene            13795..14544
                     /locus_tag="O7798_001256"
     CDS             13795..14544
                     /locus_tag="O7798_001256"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501222.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HDC2863522.1"
                     /translation="MIKIKDVEKSYQSAHVFKRRRTPIVKGVSFECPIGATIAIIGES
                     GSGKSTLSRMILGIEKPDKGCVTLNDQPMHKKKVRRHQIGAVFQDYTSSLHPFQTVRE
                     ILFEVMCQCDGQPKEVMEVQAITLLEEVGLSKAYMDKYPNMLSGGEAQRVAIARAICI
                     NPKYILFDEAIGSLDMSIQTQILDLLIHLRETRQLSYIFITHDIQAATYLCDQLIIFK
                     NGKIEEQIPTSALHKSDNAYTRELIEKQLSF"
     gene            14556..15749
                     /locus_tag="O7798_001257"
     CDS             14556..15749
                     /locus_tag="O7798_001257"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501221.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HDC2863523.1"
                     /translation="MKGAMAWPFLRLYILTLMFFSANAILNVFIPLRGHDLGATNTVI
                     GIVMGAYMLTAMVFRPWAGQIIARVGPIKVLRIILIINAIALIIYGFTGLEGYFVARV
                     MQGVCTAFFSMSLQLGIIDALPEEHRSEGVSLYSLFSTIPNLIGPLVAVGIWNANNIS
                     LFAIVIIFIALTTTFFGYRVTFAEQEPDTSDKIEKMPFNAVTVFAQFFKNKELLNSGI
                     IMIVASIVFGAVSTFVPLYTVSLGFANAGIFLTIQAIAVVAARFYLRKYIPSDGMWHP
                     KYMVSVLSLLVIASFVVAFGPQVGAIIFYGSAILIGMTQAMVYPTLTSYLSFVLPKVG
                     RNMLLGLFIACADLGISLGGALMGPISDLVGFKWMYLICGMLVIVIMIMSFLKKPTPR
                     PASSL"
     gene            complement(15973..16722)
                     /locus_tag="O7798_001258"
     CDS             complement(15973..16722)
                     /locus_tag="O7798_001258"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501220.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDC2863524.1"
                     /translation="MSNTNKHYIEEEYATEQSRFFKRDIGFIFLYIFLVNILPIIIVF
                     LTFGLVAVFTQQAPWGFSFPISMNISYLLAVIISLAIFRLMHEDAFIPMIRSQIVASA
                     KYKWHILISFTLSVVLFLLLNHFNIFALNVDSFTVFDIYPLIKGYGSISLIAIFSLTI
                     ILNTLICQLIFRHILIQELSRLIPLKITIVLSIILETLFYYPYINTWWEFIPALILAG
                     SATYLYLKSYRNFMVSYFYQLAVILVLHIFM"
     gene            16917..18494
                     /locus_tag="O7798_001259"
     CDS             16917..18494
                     /locus_tag="O7798_001259"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501219.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FMN-binding glutamate synthase family protein"
                     /protein_id="HDC2863525.1"
                     /translation="MTFLTVMQFIVNIIVVGFMLTVIVIGLIWLIKDKRQSQHSVLRN
                     YPLLARIRYISEKMGPELRQYLFSGDNEGKPFSRNDYKNIVLAGKYNSRMTSFGTTKD
                     YQDGFYIQNTMFPMQRNEISVDNTTLLSTFIYKIANERLFSREEYRVPTKIDPYYLSD
                     DHAIKLGEHLKHPFILKRIVGQSGMSYGALGKNAITALSKGLAKAGTWMNTGEGGLSE
                     YHLKGNGDIIFQIGPGLFGVRDKEGNFSEGLFKEVAQLSNVRAFELKLAQGAKTRGGH
                     MEAEKVNEEIAKIRNVEPYKTINSPNRYEFIHNAEDLIRFVDQLQQLGQKPVGFKIVV
                     SKVSEIETLVRTMVELDKYPSFITIDGGEGGTGATFQELQDGVGLPLFTALPIVSGML
                     EKYGIRDKVKLAASGKLVTPDKIAIALGLGADFVNIARGMMISVGCIMSQQCHMNTCP
                     VGVATTDAKKEKALIVGEKQYRVTNYVTSLHEGLFNIAAAVGVSSPTEITADHIVYRK
                     VDGELQTIHDYKLKLIS"
     gene            complement(18662..19117)
                     /locus_tag="O7798_001260"
     CDS             complement(18662..19117)
                     /locus_tag="O7798_001260"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501218.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1307 domain-containing protein"
                     /protein_id="HDC2863526.1"
                     /translation="MKKLCSLIVVALVCIIALSACGKEQTKTYEGDVSGKHVLTSITY
                     KDDKVLKQSTINTIKYDDLGMDKDEAKKLFAKSESIFKDLKGVKYKVDYKDKKAIEHL
                     DIDYTEVDMKKLNKRLGVSTKENKDISFEKLEKQLKHRGLKEKDKMDDK"
BASE COUNT         6648 a         2835 c         3637 g         5998 t
ORIGIN      
        1 acaacaggag cgtattacac tctatcttaa gcataatact aaagaaccca ataccatcaa
       61 aactgtacat ttcacaagtt taaaaagagg acctatgggc gatgcagtaa ttgaaggtta
      121 cataaatgaa aataaagaag atgattttgt tgcatatggg tctccagaac ataattatca
      181 atttggtgga agtttaatca aaagtaaaaa tttaagcacg ttattaaaac cagtacatca
      241 aaccaaatca cctgatgaga taaaaaagga attagagtct aaaaagaacg accgctaaaa
      301 ctatgcggcc gttttaattt tgttttcaag ttaatcatac ttacatataa aaatgaaaag
      361 ttgaattttt agtacaattt ccactgtatt tatctgttaa ccactttata cccgcaatat
      421 ttcgttgatc ttatataaac acttttggct gcttttcctt gacctagatt aaaattatag
      481 attttctttg taagagtgtg ttttgtagta tcataaatat gtaaactgta taaaattcca
      541 ccacatttta ggagctggtg atagatgtcg aaaaagaaaa ttttaatatt aactagtatt
      601 atgttaatca tattaattag tgttgcaggt atctatttaa aagtgaaata tgacgaaaaa
      661 gaaaaacaaa aagcaatata ctataaagaa caacaagcgc gcattacact ttatctcaag
      721 cataacacta aagaaccgaa tacaatcaaa tctgtacatt tcacaaactc ggaaacaagt
      781 cctatgggaa gtgctgtgat tgaaggttac ataaatgaaa acaaaaaaga taattttact
      841 gcttatgcta caccagaaca taattatcaa tttggtggtg ctatgataga aagtgaaaaa
      901 ttaagcgagt tactaaagcc agccaatcag ttaaaatcac cagatgatat aaaaaaagaa
      961 ctaaataaaa agaagagtca ctaaagttag gagttacttt aatgtccaaa aaacatgttt
     1021 ttataattat tggtgtcata ttgtgtatat gtacagtttc tacggtcatg cattttaaaa
     1081 tgaaatatga tgaaaaagaa aaacaaaaag cgatttacta caaagaacaa caagaacgta
     1141 ttacactcta tcttaagcat aatactaaag aaacgaacac gattaaatct gtacatttca
     1201 caaacttgga aacaagtcct atgggaagtg ctgtgattga aggatacatc aatgaaaata
     1261 aagaagatga ttttactgct tatgcatcgc ctgaacataa ttatcaattt ggtggcgcta
     1321 tgataaaaag tgaaggagta gataaattat taaaaccagc acatgaaaga aaatcaccag
     1381 aaaaaatcaa agaagaatta gataaaaaag aaggccacta gggtcttctt tatttttgat
     1441 ttaatcttcc aataatctat gtcattgcta tcgaaggtgt ttcgcaatta atataaatca
     1501 cttcatcatc accaatactt ccccagtttt gtacagtaca ttaacacaaa cgaaccacgt
     1561 taatttaaat ggaataatag tttggccatt ataagaacaa tatatatcga ataacaatgt
     1621 cgatgacgtg atttattgac attatcaaat tttctcaaat gtgtgtgatt ttttataaaa
     1681 aagggtagag caaggtataa tatcctttca atctgttttc atattttata tattttttaa
     1741 atataagtgc taaatgtttt aactaaagca tagattgaca agatgttata cagaatttca
     1801 aattctatcc aatattgttc gaagtgtagt atcactggat tggtattaaa caatgtaaag
     1861 gagagattgc aaatgccgta taattacaag aaacaaaatg gagagttaat gtctgtaatg
     1921 agccaaggtg aaaagtttat tcatcaatca cccgttaatg atgaacttag tgcattgatt
     1981 aagttattaa tttctaaaat taacggttgt cattattgtg ttgatatcca taaaaaagaa
     2041 ttaaaggaat tgggtgtaac acaaatgaaa attgatgaag tcttgagttt tagacattta
     2101 gatttattta ctgatcaaga aaaagtgacg cttgaatttg cagaaatgtt aaattcaatc
     2161 aaagacttta agaagtttga aattattgac cggctaaaat cattttatga tgaagaacaa
     2221 attattgatc ttgtctttgt tgtaaaccaa attaacggtt ggaacagatt aaatattatt
     2281 agtgatagac tataattgtt catataaatg cagagtttca tctcgaacgc tatatcataa
     2341 caaatcatgc cactatacag gtcaaatctt gtatagtggc attttaattt atccctttga
     2401 atactgttat ttaacgaata tcggtccacc tggtccaaca gggataccta ataggaacca
     2461 aatgatgaca aatactgtcc atacaatact tagcgcgatt gaatacggca ttaaactaga
     2521 aagtaaggct ccgagtttca tgcgtttatc gtatttttgt gcataagtta ataataaagg
     2581 taagtacggc atcatcggtg taattggatt ggtaattgaa tcgcctacac ggtaaatgac
     2641 ttgtgtgaat gcgggatgaa agccgataag gattaacatt ggtacgaata tcggtcctaa
     2701 aataccccat ttagccgatg cgcttccgat taacatgttg accattgcac tcagtacaat
     2761 aatacctagt atcaatacaa taccgttttg atgttctaat aatttggcac ctttaacagc
     2821 agcgataatt cctaaattac tccactttaa atacgcaagt agctgtgctg caaaaaacac
     2881 aataacgata aatgttccca ttgatcctac agcatcgccg aacattttac ctaagtcttt
     2941 tgtattttta atttctttgc ttaaaatccc ataaactaat ccaggtacta aaaatacgac
     3001 aagaataatt aatccgacac cgttaattaa tggcgcatcg tctagtaagc tgcctgtttt
     3061 agcatttctt aaaaagctat gttcaggaat ggctgtaata attaataaaa taattgtgac
     3121 tatgaaactg atatttgccc attttaaagc atgtgcttct ttgtcagtaa tatgtgaaga
     3181 tgtttcttca tggtcatcat gcattaaact gtcatcatat tttcctaatc taggaataat
     3241 gagcttagtt gtaactagca atatcgtagg aagtaataca acgacactcg ctgcgataaa
     3301 gtaccagttc atagcaacgt ttgttttaat agaatctgaa acgatacgtg ttgccggttc
     3361 tgtaaatgaa tagaccaaag catcttgcat accaacaact atatttgctg caaatcctcc
     3421 aacagcggaa gcatatgcca tcgttagtcc agcgataggg tgatagccaa ttttaataaa
     3481 aagcattgct gcaagcggcg gcaagataat tgtcgcagca tcgccggctg tactacctaa
     3541 aataccaatt aatataatag tcggtaaaat taagaaacgt ggtgcgcgat tcacaacaga
     3601 aatcattaac ttatcgaagt atcctgtttt ctctgcaaca ccaataccaa tcatcactgc
     3661 tagtactaag cctaatgctg ggaactctga gaaattttta atcgtatcat tcattatcat
     3721 cgtaaatcca tcatggctaa ttatattttt aatataaatg gtttgatgcg tacctggatg
     3781 cttaacagat acattaaata atgagataac ccatgtcata atggctaagc ccacacacat
     3841 taaaaagaat aagacgctag gatctggcaa tttatttccg attttttcaa cactattcaa
     3901 gaaacgattg acgatagacc ccttttgttg atgttttgat gtcatcaatt attcccccct
     3961 ttgttaaata tttaaagtgt aacaaaaaat actctcaaaa gtaacaattt tcagaaaata
     4021 aaaaaactaa tattgttaaa tattttgagt tattcaatag aaagtgtata gcagagtagt
     4081 taagactgcc tgaagactta tctattaggt ttatgaagca tcgaacagtg gaaaataagg
     4141 actgtaagtt taagatatgt tgtataggag tgactgaatg aaacgtttgg aaaataaagt
     4201 agcagtcgta acaggagcaa gtacaggtat cggtcaagct tctgcaatcg ctttagctca
     4261 ataaggtgcg tatgtattgg cggtagacat agctgaagcg gtatcggaga ctgtcgataa
     4321 aattaaaagt aatggtgaca atgcgaaggc gtataatgtg gataatgcaa gcgaacaaca
     4381 agtggtagac tttgtgtctg acataaagga acagtttgga agaatcgatg tgttgtttaa
     4441 taatgccggt gtggataatg cggctgatag aattcatgag tatccaatag atgtgtatga
     4501 caagattatg aatgtagata tgcgtgggac atttttaatg acgaaaatga tgttaccttt
     4561 aatgatgaat caaggtggct ctattgttaa tacgtcttca ttttccggac aagcagcaga
     4621 cttgtatcgc tctggatata atgctgcgaa aggtgcagtg attaatttta caaaatcaat
     4681 cgcaattgag tatggccgtg atagcattcg agccaatgcg attgcaccag gtacaattga
     4741 aaccccgtta gtagataaac tgacaggtac gagtgaggat gatgcaggta aaacatttag
     4801 agaaaatcaa aaatggatga ctccgctggg acgtttaggt aaaccagaag aagttgctaa
     4861 attagtagtc ttcttagcat ctgacgacag ttcattcata actggagaga cgattcgaat
     4921 tgatggtggt gtgatggctt acacatggcc tggcgagatg ttaagtgatg attcgtggaa
     4981 gcggacattg gaataattat ttaaaatcga tatccagtgg aaaagaattt ggcatgaagt
     5041 aggcaatgta tgcatattgt cgcaatgaaa gacatttaaa gcggagatta attaatcttt
     5101 gaaaatcaca tattgttcat ttgaagtgta ttgcttaaag cttgttttaa cgtattgtag
     5161 gtcgtgcatc taatttatca gaatctcgag ttcaaacttt tggagtatct ttaaaataag
     5221 ctgtattttg tctattctaa taaattaagg agaattttat gttaaaagaa aaagaaagtt
     5281 ttagattgct atatcaagct ataagagaga ttgcagataa aattggagat aatcagttag
     5341 aaactaattc cgttagttta ttattattgg actttgattt tgaacatgaa gtatttgatg
     5401 aattgtatct tgtgatttta aaatatttaa atacagtaag tatagagaac ataagtcata
     5461 gtgagctttt gaatttaata gaaaatacga ttccagaaga tcgagagatt aacacgtttg
     5521 taaaaaataa aataataatt ggctttgcta ataattactt ccctgaatta caagtattag
     5581 caaacgaaat aaaatctgat atggctagtt cattaaaaca atgatatttt tatttaaatt
     5641 tttaaagctt tgtacgaaat tgtacaaagc ttttttggtg cgtattgtat gggcaacaac
     5701 ttgacgatga aaatccgtta caggattggt aataggaaat gttagcgaaa gacaagggta
     5761 tccattgtag attaacaaaa ggacgtttcc acaagtgtgg gttattctca ctaaagcaat
     5821 acgcagagac aacttacgta aaattttgaa ctgactagaa cggaacttct actcaattat
     5881 tgataaaaat tttcaaaaag acttgaatgt gctgagaata cgaagtttat ggaaggatta
     5941 tcaaaatata aatgtgcatt catttacaac ctttattgac aatgattctc aactaatata
     6001 gtatataatc aaatcgtaat agttacgatt tgttttctgc aacttttttg aagttttagt
     6061 tgaggtgaaa acagtaaaag catctaagtg aatgtagtta acggacaact gcattcgctt
     6121 gtagagccac aagaagcaac tttaaataag gtttacggtt gcattttgat acaacaaccg
     6181 attactaagt catgctttcc actttgcggg ttagcatgac ttacctaata gatagagcta
     6241 ttaggttcag cttctaaaaa attacagttt tagaggaata cagttgcttg cttcgcaaca
     6301 actgcataag agccatggtt ttcgcttttg cgaattagca tgacttacct aatagataga
     6361 gctattaggt tcatcttcta aaaaattaca ggtttagagg aatacagttg tttgcttcgc
     6421 aacaactgca taagagcctc tagtaattaa aattacagag gctctaaaaa tacatctaaa
     6481 ggagtgtcgt atgaatcggc aggttataga attttctaag tataatcctt cggggaatat
     6541 gacgatactt gttcattcaa aacatgatgc tagtgaatat gcatctatcg ccaatcagtt
     6601 gatggccgca acacatgtat gctgtgaaca ggtaggcttt atagaatcaa cacaaaatga
     6661 tgatggtaat gattttcact tagttatgag cggtaatgaa ttttgcggta atgcgacgat
     6721 gtcatatata catcatttgc aggaaagtca tttgcttaaa gaccaacagt ttaaggtgaa
     6781 ggtgtctggc tgttcggatt tagtgcaatg cgcaattcat gattgccaat actatgaagt
     6841 tcaaatgcca caagcccatc gtgttgtgcc aacaacaatt aatatgggta atcattcatg
     6901 gaaagcaata gaaattattt atgaaacata tgtacattat gtgattccag ttaaacaagt
     6961 aacaacagaa attcaacatt tggttgaagc gtttgtgcgt gagcaacaat ggagtcacaa
     7021 atataaaaca gtaggtatga tgctttttga tgaacaacgt caatttttac agccattaat
     7081 ctatatacca gaaattcaaa gtttaatttg ggaaaatagc tgtggttctg gtacagcatc
     7141 aattggggtt tttaataatt atcaacgtaa tgacgcatgc aaagatttta cagtacatca
     7201 gccagggggc agtattttag tgacatcaaa gcgatgtcat caattgggat atcaaacttc
     7261 aattaaagga caggttacaa ctgtagctac aggaaaagca tatatagaat aaggagccta
     7321 caatgaataa ctttaataat gaaatcaaat tgatattaca acaatattta gaaaagtttg
     7381 aagcgcatta cgagcgtgta ttacaagacg atcaatatat cgaagcatta gaaacattga
     7441 tggatgacta tagtgaattt attttaaatc ctatttatga acaacaattt aatgcttggc
     7501 gtgacgttga agaaaaagca caattaataa aatcactgca atatattaca gcgcagtgtg
     7561 ttaaacaagt ggaagtcatt agagcgagac gtctattaga cggacaggcg tctaccacag
     7621 gttactttga caatatagaa cattgtattg atgaagagtt tggacaatgt agtatagcta
     7681 gcaatgacaa attattgtta gttggttcag gtgcatatcc aatgacgtta attcaagtag
     7741 caaaagaaac aggtgcttca gttatcggta ttgatattga tccacaagcc gttgacctag
     7801 ggcgcagaat cgttaacgtc ttagcaccaa atgaagatat aacaattacg gatcaaaagg
     7861 tatctgaact taaagatatc aaagatgtga cgcatatcat attcagctcg acaattcctt
     7921 taaagtacag cattttagaa gaattatatg atttaacaaa tgaaaatgtc gtagttgcaa
     7981 tgcgctttgg tgatggcatc aaagcaatat ttaattatcc gtcacaagaa acagcggaag
     8041 ataagtggca atgtgtgaat aaacatatga gaccacagca aatttttgat atagcacttt
     8101 ataaaaaagc agctataaag gtaggtatta cggatgtcta aattattaat gataggcact
     8161 ggtccggtcg caatccaatt agcgaatatt tgctatttaa aatcagatta tgagattgat
     8221 atggttggac gtgcctcaac atcagaaaaa tcaaaacgct tatatcaagc gtataaaaaa
     8281 gagaaacaat ttgaagtcaa aatacaaaac gaggcgcatc aacatctgga aggtaagttt
     8341 gaaattaatc gtttgtataa agatgttaaa aacgttaagg gtgaatacga aacggttgtc
     8401 atggcatgca cagcagatgc ttattatgac acactacagc aattgtcgtt agaaactttg
     8461 caaagtgtca aacatgtcat tttaatatca ccgacatttg gttcgcaaat gattgtcgaa
     8521 caatttatgt ctaaatttaa taaagatatc gaagtgattt cattctcaac ttatcttggc
     8581 gatacacgta ttgttgataa agaagcgcct aatcatgtgt tgacaacagg tgtaaaaaag
     8641 aaattgtaca tgggatcgac acattcaaac tcaacaatgt gtcaacgaat ctctgcttta
     8701 gctgagcaat tgaagattca attagaagtc gttgaatcgc cactgcatgc tgaaacgcga
     8761 aacagttcgc tttatgtgca cccaccacta tttatgaatg acttttcatt gaaagccatt
     8821 ttcgaaggaa cagatgtacc ggtttatgtg tataagttat ttcctgaagg accgataacg
     8881 atgacactaa tccgtgaaat gcgtttaatg tggaaggaaa tgatggttat tttacaagca
     8941 tttagagtgc cgtcagtcaa cctgcttcaa tttatggtga aggaaaatta tccagtacgt
     9001 cctgaaactt tggatgaagg tgatattgag catttcgaaa tcttgccaga tatcttacaa
     9061 gaatatctgc tttatgtaag atataccgca atcctcattg atccattttc acagccagac
     9121 gaaaacggac attactttga tttttcagct gtaccattta agcaagtcta taaaaatgaa
     9181 caggatgttg ttcaaattcc aagaatgcca agtgaagatt attacagaac ggcgatgatt
     9241 cagcatattg ggaaaatgct aggtatcaaa acgccaatga ttgatcagtt cctaactcgc
     9301 tatgaagcaa gttgccaggc gtacaaggat atgcatcaag atcaacactt atcttctcaa
     9361 tttaatacaa atctatttga aggagataaa gcactcgtca caaaattttt ggaaatcaat
     9421 agaacgcttt cataataagg gtttgaagtt ttataataga aaaaaattat tgaattatgt
     9481 ttgacattta cataaaaata agcaaataat tgagaaaaat aatcattacg atttgattaa
     9541 gtaatgcaac ttatcaattt agaaagagga aaagcaaatg agaaaactaa ctaaaatgag
     9601 tgcaatgtta cttgcatcag ggctaatttt aactggttgt ggcggtaata aaggtttaga
     9661 ggagaaaaaa gaaaacaagc aattaacgta tacgacggtt aaagatatcg gtgatatgaa
     9721 tccgcatgtt tacggtggat caatgtctgc tgaaagtatg atatacgagc cgcttgtacg
     9781 taacacgaaa gatggtatta agcctttact agctaaaaag tgggatgtgt ctgaagatgg
     9841 gaagacatac acgttccatt tgagagatga cgttaaattc catgatggta cgccatttga
     9901 tgctgacgca gttaagaaaa atattgacgc agttcaagaa aacaaaaaat tgcattcttg
     9961 gttaaagatt tcgacattaa ttgacaatgt taaagttaaa gataagtaca cggttgaatt
    10021 gaatttgaaa gaagcatatc aacctgcatt ggctgaatta gcgatgcctc gtccatatgt
    10081 atttgtgtct ccaaaagact ttaaaaacgg tacaacaaaa gatggcgtta aaaagttcga
    10141 tggtactggt ccatttaaat taggtgaaca caaaaaagat gagtctgcag actttaacaa
    10201 aaatgatcaa tactggggcg aaaagtctaa acttaacaaa gtacaagcaa aagtaatgcc
    10261 tgctggtgaa acagcattcc tatcaatgaa aaaaggtgaa acgaactttg ccttcacaga
    10321 tgatagaggt acagatagct tagacaaaga ctctttaaaa caattgaaag atacaggtga
    10381 ctatcaagtt aagcgtagtc aacctatgaa tacgaaaatg ttagttgtca attctggtaa
    10441 aaaagataac gctgtgagtg acaaaacagt cagacaagcg attggtcata tggtaaacag
    10501 agataaaatt gccaaagaaa ttttagatgg tcaagaaaaa ccagcaactc aattatttgc
    10561 gaaaaatgta acagacatta atttcgatat gccaacacgt aagtatgacc ttaaaaaagc
    10621 agaatcatta ttagatgaag ctggttggaa gaaaggtaaa gacagcgatg ttcgtcaaaa
    10681 agatggtaaa aaccttgaaa tggcaatgta ctatgacaaa ggttcttcaa gtcaaaaaga
    10741 acaagcagaa tacttacaag cagaatttaa gaaaatgggt attaagttaa acatcaatgg
    10801 cgaaacatca gataaaattg ctgaacgtcg tacttctggt gattatgact taatgttcaa
    10861 ccaaacttgg ggattattgt acgatccaca aagtactatt gcagcattta aagcgaaaaa
    10921 tggttatgaa agtgcaacat caggcattga gaacaaagat aaaatataca acagcattga
    10981 tgacgcattt aaaatccaaa acggtaaaga gcgttcagac gcttataaaa acattttgaa
    11041 acaaattgat gatgaaggta tctttatccc tatttcacac ggtagtatga cagttgttgc
    11101 accaaaagat ttagaaaaag tatcattcac acaatcacag tatgaattac cattcaatga
    11161 aatgcagtat aaataaagga gcaattagat gttcaaattt atcttaaaac gtattgcgct
    11221 catgtttcca ttgatgattg tagtaagttt tatgacattt ctattgacgt atattacaaa
    11281 tgaaaatcca gctgtgacaa ttttacatgc acaagggacg ccaaatgtaa caccagagtt
    11341 gattgcagaa acgaatgaga agtacggttt caatgatcca ttattaattc aatataaaaa
    11401 ttggttactt gaagcgatgc aatttaattt tggtacaagc tacattacag gtgacccagt
    11461 tgctgaacgt attggtccag catttatgaa tacattgaaa ttaacaataa tttcaagtgt
    11521 tatggtgatg attacatcaa ttattttagg tgtagttagt gcattaaaaa gaggaaagtt
    11581 cactgatcgt gcgatacgtt cagtggcttt ctttctaact gcattaccat catattggat
    11641 agcttcaata cttattattt acgtttcagt gaagttaaac atattgccga cttctggatt
    11701 aacaggtcca gaaagttaca tattgccagt gatcgttatt acgattgcct atgctggtat
    11761 ttactttaga aatgttagac gctcgatggt ggaacaatta aatgaagatt atgtacttta
    11821 tttaagagca agcggtgtga aatctatcac attaatgttg catgtgttgc gtaatgcttt
    11881 acaagttgcg gtatcaatct tttgtatgtc tataccaatg ataatgggtg gactagttgt
    11941 tatcgagtat atctttgcat ggcctggact aggtcaatta agtttaaaag caatacttga
    12001 acacgatttt ccagtcattc aagcatatgt attaattgta gcggtattat ttattgtatt
    12061 taatacatta gcagatatca ttaatgcgct attaaatcca agattaaggg agggcgcacg
    12121 atgataattt taaaacgatt attacaagat aaaggtgcag taattgcttt aggcattatt
    12181 gtattatatg tctttttagg attagcagca ccacttgtga cattttatga tcctaaccat
    12241 atcgatacag caaacaaatt tgctggcatg agttttcaac atctactagg tactgaccat
    12301 ttaggtagag atattttaac taggttaatt tatgcgatta gaccaagttt gttatatgtc
    12361 tttgttgcgc tatttgtttc tgtacttatt ggatctattt taggattctt atcaggatat
    12421 ttccaagggt ttgttgacgc cttaatcatg cgtgcgtgtg atgttatgtt ggcattccca
    12481 agttatgttg taacgttagc attaattgca ttgtttggaa tgggtgccga aaatattatc
    12541 atggcattta ttttgacgcg ttgggcatgg ttctgtcgtg ttatacgtac aagtgttatg
    12601 cagtacactg cttctgacca tgtaagattt gctaaaacaa tcggtatgaa tgatatgaaa
    12661 attattcaca aacatattat gccattaaca ttagcagata ttgctatcat ctctagtagc
    12721 tcgatgtgtt caatgatctt gcaaatatct ggcttttcat ttttaggatt aggtgtcaaa
    12781 gcgcctactg cagagtgggg catgatgctt aacgaagcta gaaaagtgat gtttacacat
    12841 cctgaaatga tgtttgcgcc aggtattgcc atagtgatta tagtgatggc atttaacttc
    12901 ttatccgatg ctttacaaat tgctattgat ccccgcatct cttctaaaga taaacttcgt
    12961 tctgtgaaaa aaggagtggt gcaatcatga cattgttaac agttaaacat ttgacgatta
    13021 cagatacctg gacagatcaa ccactcgtga gtgatgtgaa ttttacatta actaagggtg
    13081 aaactttagg cgttattgga gaaagtggta gtggtaaatc aatcacttgt aaatcgatta
    13141 ttggtttgaa tcccgaacga ctcggggtga caggtgaaat tatctttgat ggtacatcaa
    13201 tgttgtcatt atctgaatcg caattgaaaa agtaccgtgg taaagacatt gcgatggtca
    13261 tgcaacaagg tagtcgtgcc tttgacccat caactactgt cggtaaacaa atgtttgaga
    13321 ctatgaaagt acatacgtca atgtctacac aagaaattga aaagacattg attgaatata
    13381 tggattattt aagtttgaaa gatcctaaac gtatattaaa atcataccct tacatgttat
    13441 caggaggaat gttacagcga ttgatgattg ctttagcgtt agctttgaaa ccaaagttaa
    13501 tcattgctga tgagccgaca acggctttag atacaattac acaatatgat gtactggaag
    13561 catttataga tattaaaaaa cactttgact gtgcgatgat tttcatttca catgatttaa
    13621 cggttattaa caagattgca gaccgtgttg ttgtgatgaa aaatggtcag cttattgaac
    13681 aagggacacg tgaatcagtc ttgcatcatc cagaacatgt ttatacgaag tatttattat
    13741 caacgaagaa gaagattaat gatcatttta aacatgtgat gaggggtgat gtacatgatt
    13801 aaaattaaag atgttgaaaa gtcatatcaa agcgcacatg tttttaagcg tcgtcgaaca
    13861 cctatcgtga aaggtgtgtc atttgagtgt ccaatcggtg cgacgattgc gattatcgga
    13921 gaaagtggta gcggtaaatc gacgttgagt cgtatgatat taggtattga gaaaccggat
    13981 aaaggttgtg taaccttaaa tgatcaaccg atgcataaga agaaagtgag acgtcatcaa
    14041 attggtgctg tatttcaaga ttatacgtca tcattacatc catttcagac tgttagagaa
    14101 atcttatttg aagtgatgtg tcaatgtgat ggacaaccta aagaagttat ggaagtccaa
    14161 gcaattacat tgttggaaga agtcggtcta tctaaggcat acatggataa atatcctaat
    14221 atgttatcag gtggagaggc gcaacgtgtt gcgattgcgc gtgcaatatg tattaaccct
    14281 aaatatattt tgtttgatga agccattggt tcactcgaca tgtcaattca aacacaaata
    14341 ttagatttat tgattcattt acgtgaaacg cgtcagttga gttatatttt tatcacacat
    14401 gatattcaag ctgccacgta tttatgtgat caattaatta tttttaaaaa cggaaaaata
    14461 gaagaacaaa ttccgacaag cgcattgcat aaaagtgaca atgcttatac aagagaatta
    14521 atagaaaaac aactatcatt ctaaggagtg agataatgaa aggtgcaatg gcttggccct
    14581 ttttgagatt atatatatta acattgatgt tctttagtgc caatgcaatc ttaaacgtgt
    14641 ttataccttt acgagggcat gatttaggcg caacgaatac ggttatcggt atcgttatgg
    14701 gggcatacat gttaacagca atggtatttc gaccatgggc aggacaaatt attgctcgtg
    14761 tcggtcccat taaagtatta agaattattt tgattatcaa tgccatagct ttaattattt
    14821 atggttttac tggcttagaa ggttatttcg tagcacgtgt tatgcaaggt gtgtgtacgg
    14881 cattcttttc tatgtcttta cagctaggta ttattgatgc attaccagag gaacatcgtt
    14941 ctgaaggtgt atcattgtac tcgctatttt caacgattcc aaacttaatc ggaccattag
    15001 ttgccgtagg tatttggaat gcaaataata tttcactatt tgcaattgtc attatcttta
    15061 tcgcattaac aacaacattc tttggctatc gcgtgacctt tgctgaacag gaacccgata
    15121 cgtcagataa gattgaaaaa atgccgttta acgctgtaac tgtttttgcg caatttttca
    15181 aaaataaaga gttgttgaac agtggtatta tcatgattgt tgcatcgatt gtatttggtg
    15241 cagttagtac atttgtaccg ttatacacag tgagtttagg attcgcgaat gcgggaatct
    15301 ttttgacaat acaggccatc gcagttgttg cggcaagatt ttacttaagg aaatacattc
    15361 cgtcagatgg tatgtggcat cctaaatata tggtatctgt actatcatta ttagtaatcg
    15421 cgtcatttgt agtggcattt ggtccgcaag taggtgcaat tattttctat ggtagtgcga
    15481 tattaatagg aatgacgcaa gcaatggtgt acccaacatt aacatcatac ttaagcttcg
    15541 tcttaccaaa agtaggtcgt aatatgttgt taggtttatt tattgcctgt gcagacttag
    15601 gtatatcgtt aggtggcgca ttgatgggac ctatttccga tttagtagga tttaaatgga
    15661 tgtatctaat ttgtggtatg ttagtcattg taataatgat tatgagtttc ttgaaaaagc
    15721 caacaccacg tccagcgagt agtctttaat gaagtgaatt aaagcatatt aagttaatga
    15781 atatttaaat tttaaaaggt atattgagca tggcgattca tgtgcttcat gctaggacat
    15841 gaaacattct atatggctcg tttttagaac gacagtatat ctaaataaag cacgcttaaa
    15901 agtgagtttt gatactgact tttaagtgtg ctttttgatg tgtatggata atggataata
    15961 ctctgaaaaa ttttacatga aaatatgcaa aacgagtata actgctaatt gatagaaata
    16021 gctcaccata aaattacggt atgattttaa atataagtaa gtcgcactac ctgctagtat
    16081 caatgctgga atgaattccc accatgtatt aatgtatgga tagtagaaca gagtttcaag
    16141 gataatggac aatactattg taatctttaa aggtattaat ctgcttaatt cttgaattaa
    16201 aatatgacgg aaaataagtt gacaaatcaa agtatttaat ataatggtta acgaaaatat
    16261 agctattaaa ctgatggaac catacccttt aatgagcggg taaatgtcaa agacagtaaa
    16321 ggaatctaca tttagtgcga aaatattgaa atgatttaaa agtaaaaaga gtacgacact
    16381 tagtgtaaat gatataagaa tatgccattt atatttagca ctagcaacga tttgcgaacg
    16441 tatcattgga ataaacgcat cttcatgcat cagacgaaaa atagctagtg aaataataac
    16501 tgcgagtaaa tagctaatgt tcattgaaat aggaaaagag aaaccccacg gagcttgttg
    16561 agtgaataca gctactaacc caaaagttaa aaagacgata atgatcggca agatgttaac
    16621 caaaaatatg taaaggaaaa taaatccaat atcacgtttg aaaaaacgcg attgttcggt
    16681 agcgtattct tcttctatgt aatgtttatt tgtatttgac atagtatacc tcttaaatag
    16741 ttgtattata tagatacttt agcacatatt actttgtatt gtatgtttta tacattaaaa
    16801 tttaaaatga aaaacatatc ataaaattgt tttataaaat gaagcgcttc cattgtgttt
    16861 tgttttgtaa ggtgtatcat aaatattgaa ttgaaatttt ggggggaggt attgtaatga
    16921 cgtttcttac agtcatgcaa tttatagtta acattatcgt tgtaggattc atgcttacgg
    16981 ttattgttat cgggcttatt tggttaatta aagataaaag acaatcacaa catagtgtat
    17041 taaggaatta tcctttacta gcacgtatta gatatatttc agaaaaaatg ggaccggaat
    17101 tacgtcagta tttattttct ggggataatg aagggaaacc tttttcacgt aatgattata
    17161 aaaatatcgt tttggctgga aaatataact ctcgtatgac cagcttcggt actactaaag
    17221 attatcaaga cggcttttac atacagaaca caatgtttcc gatgcaacgt aatgagattt
    17281 cagtagataa tacaacattg ttatcaacat tcatttataa aatcgcgaat gagcgtttat
    17341 ttagtcgtga agaatatcgt gtgccgacaa agattgatcc gtattactta agtgatgacc
    17401 atgcaataaa attaggtgaa catttaaaac atccatttat tttaaaacgt atcgtaggac
    17461 aatctggtat gagttatggc gctttaggaa aaaatgccat tacagcttta tctaaaggtc
    17521 tagctaaagc gggcacttgg atgaatacag gtgaaggtgg cttatcagaa tatcatttaa
    17581 aaggtaatgg ggatatcatt ttccaaattg gtcccggttt atttggtgtt cgtgataaag
    17641 aaggtaattt tagtgaaggt ttatttaaag aggttgcaca gttatctaac gtacgcgcat
    17701 ttgagctgaa gttggcacaa ggtgctaaga ctcgtggtgg tcatatggaa gctgaaaagg
    17761 taaacgaaga aattgctaaa atccgaaatg ttgaacctta taaaacaatc aattcaccta
    17821 accgttacga atttattcat aatgctgaag atttgattcg tttcgtcgat cagttgcagc
    17881 aattaggtca aaaaccagta ggattcaaaa ttgtagtaag caaagtttca gaaattgaaa
    17941 cacttgtacg tacgatggtg gaactagata agtatccaag ctttattacg attgatggtg
    18001 gtgaaggtgg tactggtgca acattccaag aattacaaga tggtgttggc ttaccgctat
    18061 ttacagctct acctattgtg tctggcatgt tagaaaaata tggtattcga gataaagtga
    18121 aattggcggc atctggtaag ttagtgacac cagataaaat tgcgattgca ctaggtttag
    18181 gtgcagattt tgtaaatatc gcacgtggga tgatgattag tgtcggttgt ataatgagtc
    18241 aacaatgtca catgaatacg tgtcctgtag gtgttgcaac gacagatgcg aagaaagaaa
    18301 aagcattgat tgttggagaa aagcaatatc gtgtcacaaa ctatgtaaca agtttgcatg
    18361 aaggcttatt caatattgca gcagctgttg gcgtatccag tcctacagaa attactgctg
    18421 atcatattgt atatcgaaaa gtcgatggtg agttacaaac gatacatgat tataaattga
    18481 aactcattag ttaacttaat tatttcggga aattgaaagc agcggatttt agcgttactg
    18541 caaataattt tatattagta gtggatgctg gtcacacaag aacttcaaat attaaagccc
    18601 tcagaatatg aattaaggtt tgtaacctta gtcttatctg agggcatttt taagttataa
    18661 actatttgtc gtccatttta tctttttctt ttaaacctct gtgctttaat tgcttttcaa
    18721 gtttttcaaa actaatatct ttattttctt tagtcgaaac accaagacgt ttatttaatt
    18781 ttttcatgtc aacttctgtg taatctatgt ctaagtgttc aattgctttt ttatctttat
    18841 agtctacttt gtattttacg cctttaaggt ctttgaaaat actttcagat ttggcgaata
    18901 actttttggc ttcgtcttta tccataccta gatcgtcata tttaattgtg ttgattgtag
    18961 actgttttaa aactttatca tctttatatg tgatagaagt tagtacatgt ttaccactaa
    19021 catcaccttc atatgttttg gtttgttctt taccacaagc tgataatgca atgatacaaa
    19081 ctaatgctac tacaattaat gaacataatt ttttcaaa
//
LOCUS       DALPQQ010000044        18408 bp    DNA     linear   BCT 22-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus strain K18-6-464
            SAMD00233528-rid16434743.denovo.044, whole genome shotgun sequence.
ACCESSION   DALPQQ010000044 DALPQQ010000000
VERSION     DALPQQ010000044.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMD00233528
            Sequence Read Archive: DRR236061
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 18408)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 18408)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001543423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001543423.1
            Genome Coverage       :: 77x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/22/2022 17:09:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,811
            CDSs (total)                      :: 2,743
            Genes (coding)                    :: 2,689
            CDSs (with protein)               :: 2,689
            Genes (RNA)                       :: 68
            rRNAs                             :: 2, 4, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 4, 2 (16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 54
            CDSs (without protein)            :: 54
            Pseudo Genes (ambiguous residues) :: 0 of 54
            Pseudo Genes (frameshifted)       :: 27 of 54
            Pseudo Genes (incomplete)         :: 27 of 54
            Pseudo Genes (internal stop)      :: 10 of 54
            Pseudo Genes (multiple problems)  :: 10 of 54
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..18408
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMD00233528-rid16434743.denovo.044"
                     /strain="K18-6-464"
                     /db_xref="taxon:1280"
                     /geo_loc_name="Japan: Niigata"
     gene            complement(4..183)
                     /locus_tag="O7798_001261"
     CDS             complement(4..183)
                     /locus_tag="O7798_001261"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498838.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit L"
                     /protein_id="HDC2863527.1"
                     /translation="MRRENILLRLIPFNDYDNKNFKMFIVIKNTKVIILKNKIFVFEQ
                     SIKKHNEMMYIELCD"
     gene            334..1332
                     /locus_tag="O7798_001262"
     CDS             334..1332
                     /locus_tag="O7798_001262"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498837.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LacI family DNA-binding transcriptional
                     regulator"
                     /protein_id="HDC2863528.1"
                     /translation="MKKVSIKDVAREAGVSVTTVSHILNHNDSRFSATTIKNVHAVSE
                     RLGYAPNKHAKQLRGSKIQTIGVILPSLTNPFFSALMQSIHDHKPSDVDLCFLTSTAT
                     DLYDNIKHLIDRGIDGLIIAQYISSPDALNNYLKKHHVPYVVLDQNDHQGYTDFVRTN
                     EYQGGQLAAQHLIELGHNHMIIVAPYDMMANMSTRVAGFVDTLRANQLPEPQIVHTEL
                     SKRGGLTIVDDIMVQSATAIFAINDELAIGILRGLIEHGISIPKDISLIGYDDIDYAA
                     YVSPPLTTVAQPITDIGKTSLTLLLQRLQHLDKSIDMIELPTTLKIRATTGYHLSN"
     gene            1564..2445
                     /gene="rbsU"
                     /locus_tag="O7798_001263"
     CDS             1564..2445
                     /gene="rbsU"
                     /locus_tag="O7798_001263"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498836.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribose transporter RbsU"
                     /protein_id="HDC2863529.1"
                     /translation="MSIVALLIGLGPLIGWGFFPTVASKFGGKPVHQIIGATVGTLIF
                     AIILAVVTSSGFPTGTNLLFALLSGAGWGFGQIITFKAFELVGSSRAMPVTTAFQLLG
                     ASLWGVFALGNWPGIGHKIIGFTALVVILIGARMTVWSERKEASNAKNLRRAVVLLLI
                     GEFGYWLYSAAPQATSIDGLTAFLPQAMGMVIVAVIYGFMNMKAENPFRNKITWLQII
                     SGFFFAFGALTYLISAQPNMNGLATGFILSQTSVVLATLTGIYFLKQHKTSKEMVITI
                     IGLVLILVAASVTVFIK"
     gene            2460..2864
                     /gene="rbsD"
                     /locus_tag="O7798_001264"
     CDS             2460..2864
                     /gene="rbsD"
                     /locus_tag="O7798_001264"
                     /EC_number="5.4.99.62"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498835.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-ribose pyranase"
                     /protein_id="HDC2863530.1"
                     /translation="MKKSAVLNEHISKAIATIGHFDLLTINDAGMPIPNDHRRIDLAV
                     TKNLPRFIDVLATVLEEMEIQKIYLAEEIKEHNPTQLQQIKQLISSEIEIIFIPHEEM
                     KSNLAHPLNKGNIRTGETTPYSNIALESNVTF"
     gene            2892..3806
                     /gene="rbsK"
                     /locus_tag="O7798_001265"
     CDS             2892..3806
                     /gene="rbsK"
                     /locus_tag="O7798_001265"
                     /EC_number="2.7.1.15"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498834.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribokinase"
                     /protein_id="HDC2863531.1"
                     /translation="MTNKVVILGSTNVDQFLTVERYAQPGETLHVEEAQKAFGGGKGA
                     NQAIATARMQADTTFITKIGTDGVADFILEDFKVAHIDTSYIIKTAEAKTGQAFITVN
                     AEGQNTIYVYGGANMTMTPEDVINAKDAIINADFVVAQLEVPIPAIISAFEIAKAHGV
                     TTVLNPAPAKALPNELLSLIDIIVPNETEAELLSGIKVTNEQSMKDNANYFLSIGIKT
                     VLITLGKQGTYFATKNQSQHIEAYKVNAIDTTAAGDTFIGAFVSRLNKSQDNLADAID
                     FGNKASSLTVQKHGAQASIPLLEEVNQV"
     gene            complement(3904..4038)
                     /locus_tag="O7798_001266"
     CDS             complement(3904..4038)
                     /locus_tag="O7798_001266"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498833.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDC2863532.1"
                     /translation="MIIIIINIAYLYAIIWKLKRLQKIVTSFITKHESTSIGLVENYF
                     "
     gene            4057..4818
                     /locus_tag="O7798_001267"
     CDS             4057..4818
                     /locus_tag="O7798_001267"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498832.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HDC2863533.1"
                     /translation="MSKEAGHTFLAKLGKTRLRPGGKEATDWLIQQGAFSQDKQVLEV
                     ACNMCTTSIYLAHTYGCHIQGVDINKKALEKAQENISAAGLESYIQVQQANAVKLPFD
                     DNQFDIVLNEAMLTMLPIAIKEKALREYYRVLKPGGILLTHDIVIVNESHATHVVKSL
                     SAAINVNVSPQTKLGWLDLYNQAGFNHVHYHTGPMSLMTPKGLIYDEGIVGTIKIINN
                     ALKKENRPMFCKMFKTMTKLRKDMNYITFVAKKEH"
     gene            complement(5252..6688)
                     /locus_tag="O7798_001268"
     CDS             complement(5252..6688)
                     /locus_tag="O7798_001268"
                     /EC_number="3.2.1.86"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498831.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="6-phospho-beta-glucosidase"
                     /protein_id="HDC2863534.1"
                     /translation="MTKLPQNFMWGGALAANQFEGGYDKGGKGLSVIDVMTSGAHGKA
                     RQITESIDPNHYYPNHEGIDFYHRYKEDIALFKEMGLKCLRTSIAWTRIFPNGDEDVP
                     NEEGLAFYDRIFDELIAQGIEPVVTLSHFEMPLHLAKHYGGFRNREVVDYFVHFARVV
                     FERYKDKVTYWMTFNEINNQMDTSNPIFLWTNSGVALTENDNPEEVLYQVAHHELLAS
                     ALAVRLGKEINPKFKIGTMISHVPIYPYSCHPKDMMEAQIANRLRFFFPDVQVRGYYP
                     SYAKKMLARKGYDVGWQEGDDSILQQGTVDYIGFSYYMSTAVKHDVDTTVENNIVNGG
                     LNHSVENPHIATSDWGWAIDPDGLRYTLNVLYDRYQLPLFIVENGFGAVDEVVDGHIH
                     DDYRIEYLKAHITAAIEAVDQDGVDLIGYTPWGIIDIVSFTTGEMKKRYGLIYVDRDN
                     DGHGTMERLKKDSFYWYQQVIASNGDKL"
     gene            complement(6704..7495)
                     /locus_tag="O7798_001269"
     CDS             complement(6704..7495)
                     /locus_tag="O7798_001269"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498830.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS glucose transporter subunit IIA"
                     /protein_id="HDC2863535.1"
                     /translation="MSNKYKEQAQDILTAVGGVENIVDATYDTKCITIHMQHTIPSTA
                     NEVKQIVDVTSVAENDTQLVIKLNGNVDEVYQQLQRLIKNANVEESENTDNINSQDTS
                     YTPQVKVTTPILVKAPIAGRRILLKEVRDSIFREKMVGEGLAIKAHEESKVIAPFNGL
                     ISMIVPTKHAVGIQSEDGVDIVIHIGVNTVDLEGKGFKCFVKQNDHVEAGQTLLQFDQ
                     QYIQQQGYNADVIVVISNSADLGKVELTMNEIITTEDVIFKIFKN"
     gene            7644..8348
                     /locus_tag="O7798_001270"
     CDS             7644..8348
                     /locus_tag="O7798_001270"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498829.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GntR family transcriptional regulator"
                     /protein_id="HDC2863536.1"
                     /translation="MLKYEHIAKQLNAFIHQSNFKPGDKLPSVTQLKERYQVSKSTII
                     KALGLLEQDGLIYQAQGSGIYVRNIADANRINVFKTNGFSKSLGEHRMTSKVLVFKEI
                     ATPPKSVQDELQLNADDTVYYLERLRFVDDDVLCIEYSYYHKEIVKYLNDDIAKGSIF
                     DYLESNMKLRIGFSDIFFNVDQLTSSEASLLQLSTGEPCLRYHQTFYTMTGKPFDSSD
                     IVFHYRHAQFYIPSKK"
     gene            complement(8456..9157)
                     /gene="lrgB"
                     /locus_tag="O7798_001271"
     CDS             complement(8456..9157)
                     /gene="lrgB"
                     /locus_tag="O7798_001271"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498828.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="antiholin-like protein LrgB"
                     /protein_id="HDC2863537.1"
                     /translation="MINHLALNTPYFGILLSVIPFFLATILFEKTNRFFLFAPLFVSM
                     VFGVAFLYLTGIPYKTYKIGGDIIYFFLEPATICFAIPLYKKREVLVKHWHRIIGGIG
                     IGTVVALLIILTFAKLAQFANDVILSMLPQAATTAIALPVSAGIGGIKELTSLAVILN
                     GVIIYALGNKFLKLFRITNPIARGLALGTSGHTLGVAPAKELGPVEESMASIALVLVG
                     VVVVAVVPVFVAIFF"
     gene            complement(9150..9593)
                     /gene="lrgA"
                     /locus_tag="O7798_001272"
     CDS             complement(9150..9593)
                     /gene="lrgA"
                     /locus_tag="O7798_001272"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498827.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="antiholin-like murein hydrolase modulator LrgA"
                     /protein_id="HDC2863538.1"
                     /translation="MVVKQQKDASKPAHFFHQVIVIALVLFVSKIIESFMPIPMPASV
                     IGLVLLFVLLCTGAVKLGEVEKVGTTLTNNIGLLFVPAGISVVNSLGVISQAPFLIIG
                     LIIVSTILLLICTGYVTQIIMKVTSRSKGDKVTKKIKIEEAQAHD"
     gene            complement(9706..10446)
                     /locus_tag="O7798_001273"
     CDS             complement(9706..10446)
                     /locus_tag="O7798_001273"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498826.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor LytR"
                     /protein_id="HDC2863539.1"
                     /translation="MKALIIDDEPLARNELTYLLNEIGGFEEINEAENVKETLEALLI
                     NQYDIIFLDVNLMDENGIELGAKIQKMKEPPAIIFATAHDQYAVQAFELNATDYILKP
                     FGQKRIEQAVNKVRATKAKDDNNASAIANDMSANFDQSLPVEIDDKIHMLKQQNIIGI
                     GTHNGITTIHTTNHKYETTEPLNRYEKRLNPTYFIRIHRSYIINTKHIKEVQQWFNYT
                     YMVILTNGVKMQVGRSFMKDFKASIGLL"
     gene            complement(10449..12203)
                     /locus_tag="O7798_001274"
     CDS             complement(10449..12203)
                     /locus_tag="O7798_001274"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014373763.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sensor histidine kinase"
                     /protein_id="HDC2863540.1"
                     /translation="MLSLTMLLLERVGLIIILAYVLMNIPYFKNLMNRRRTWKARWQL
                     CIIFSLFALMSNLTGIVIDHQHSLSGSVYFRLDDDVSLANTRVLTIGVAGLVGGPFVG
                     LFVGVISGIFRVYMGGADAQVYLISSIFIGIIAGYFGLQAQRRKRYPSIAKSAMIGIV
                     MEMIQMLSILTFSHDKAYAVDLISLIALPMIIVNSVGTAIFMSIIISTLKQEEQMKAV
                     QTHDVLQLMNQTLPYFKEGLNRESAQQIAMIIKNLMKVSAVAITSKNEILSHVGAGSD
                     HHIPTNEILTSLSKDVLKSGKLKEVHTKEEIGCSHPNCPLRAAIVIPLEMHGSIVGTL
                     KMYFTNPNDLTFVERQLAEGLANIFSSQIELGEAETQSKLLKDAEIKSLQAQVSPHFF
                     FNSINTISALVRINSEKARELLLELSYFFRANLQGSKQHTITLDKELSQVRAYLSLEQ
                     ARYPGRFNININVEDKYRDVLVPPFLIQILVENAIKHAFTNRKQGNDIDVSVIKETAT
                     HVRIIVQDNGQGISKDKMHLLGETSVESESGTGSALENLNLRLKGLFGKSAALQFEST
                     SSGTTFWCVLPYERQEEE"
     gene            complement(12450..13124)
                     /gene="scdA"
                     /locus_tag="O7798_001275"
     CDS             complement(12450..13124)
                     /gene="scdA"
                     /locus_tag="O7798_001275"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498824.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron-sulfur cluster repair di-iron protein ScdA"
                     /protein_id="HDC2863541.1"
                     /translation="MINKNDIVADVVTDYPKAADIFRSVGIDFCCGGQVSIEAAALEK
                     KNVDLNELLQRLNDVEQTNTPGSLNPKFLNVSSLIQYIQSAYHEPLREEFKNLTPYVT
                     KLSKVHGPNHPYLVELKETYDTFKNGMLEHMQKEDDVDFPKLIKYEQGEVVDDINTVI
                     DDLVSDHIATGELLVKMSELTSSYEPPIEACGTWRLVYQRLKALEVLTHEHVHLENHV
                     LFKKVS"
     gene            complement(13264..14988)
                     /gene="tarS"
                     /locus_tag="O7798_001276"
     CDS             complement(13264..14988)
                     /gene="tarS"
                     /locus_tag="O7798_001276"
                     /EC_number="2.4.1.355"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498823.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="poly(ribitol-phosphate)
                     beta-N-acetylglucosaminyltransferase"
                     /protein_id="HDC2863542.1"
                     /translation="MMKFSVIVPTYNSEKYITELLNSLAKQDFPKTEFEVVVVDDCST
                     DQTLQIVEKYRNKLNLKVSQLETNSGGPGKPRNVALKQAEGEFVLFVDSDDYINKETL
                     KDAAAFIDEHHSDVLLIKMKGVNGRGVPQSMFKETAPEVTLLNSRIIYTLSPTKIYRT
                     ALLKDNDIYFPEELKSAEDQLFTMKAYLNANRISVLSDKAYYYATKREGEHMSSAYVS
                     PEDFYEVMRLIAVEILNADLEEAHKNQILAEFLNRHFSFSRTNGFSLKVKLEDQPQWI
                     NALGDFIQAVPERVDALVMSKLRPLLHYARAKDIDNYRTVEESYRQGQYYRFDIVDGK
                     LNIQFNEGEPYFKGIDIAKPKVKMTAFKFDNHKIVTELTLNEFMIGEGHYDVRLKLHS
                     RNKKHTMYVPLSVNANKQYRFNIMLEDIKAYLPKEKIWDVFLEVQIGTEVFEVRVGNQ
                     RNKYAYTAETSALIHLNNDFYRLTPYFTKDFNNISLYFTAITLTDSISLKLKGKNKII
                     LTGLDRGYVFEEGMASVVLKDDMVMGMLSQTSENEVQILLSKDIKKRDFKNIVKLNTA
                     HITYPLNK"
     gene            complement(15021..16709)
                     /locus_tag="O7798_001277"
     CDS             complement(15021..16709)
                     /locus_tag="O7798_001277"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498822.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CDP-glycerol glycerophosphotransferase family
                     protein"
                     /protein_id="HDC2863543.1"
                     /translation="MVKSKIYIDKIYWERVQLFVEGHSENLDLEDSNFVLRNLTETRT
                     MKANDVKIDGNQFVCRFNVAILDNGYYLPEDKYLLVNEQELDYIAQLNPDVINDAYQN
                     LKPEQEEEYNELETQNGKINFLLQTYLKEFRKGGISKKTVYTVTPEISSDVNEFVLDV
                     VVTTPEVKSIYIVRKYKELRKYFRKQSFNTRQFIFKAIFNTTKFFHLKKGNTVLFTSD
                     SRPTMSGNFEYIYNEMLRQNLDKKYDIHTVFKANITDRRGIIDKFRLPYLLGKADYIF
                     VDDFHPLIYTVRFRRSQEVIQVWHAVGAFKTVGFSRTGKKGGPFIDSLNHRSYTKAYV
                     SSETDIPFYAEAFGIKEKNVVPTGVPRTDVLFDEAYATQIKQEMEDELPIIKGKKVIL
                     FAPTFRGSGHGTAHYPFFKIDFERLARYCEKNNAVVLFKMHPFVKNRLNIADKHKQYF
                     VDVSDFREVNDILFITDLLISDYSSLIYEYAVFKKPMIFYAFDLEDYITTRDFYEPYE
                     SFVPGKIVQSFDALMDALDNEDYEGEKVIPFLDKHFKYQDGRSSERLVRNLFGS"
     gene            complement(16731..17756)
                     /locus_tag="O7798_001278"
     CDS             complement(16731..17756)
                     /locus_tag="O7798_001278"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498821.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alcohol dehydrogenase catalytic
                     domain-containing protein"
                     /protein_id="HDC2863544.1"
                     /translation="MINQVYQLVAPRQFEVTYNNVDIYSDYVIVRPLYMSICAADQRY
                     YTGSRDENVLSQKLPMSLIHEGVGEVVFDSKGVFNKGTKVVMVPNTPTEKDDVIAENY
                     LKSSYFRSSGHDGFMQDFVLLNHDRAVPLPDDIDLSIISYTELVTVSLHAIRRFEKKS
                     ISNKNTFGIWGDGNLGYITAILLRKLYPESKIYVFGKTDYKLSHFSFVDDVFFINKIP
                     EGLTFDHAFECVGGRGSQSAINQMIDYISPEGSIALLGVSEFPVEVNTRLVLEKGLTL
                     IGSSRSGSKDFQDVVDLYIQYPDIVDKLALLKGQEFEIATINDLTEAFEADLSTSWGK
                     TVLKWIM"
     gene            complement(17749..>18408)
                     /locus_tag="O7798_001279"
     CDS             complement(17749..>18408)
                     /locus_tag="O7798_001279"
                     /EC_number="2.7.7.40"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498820.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-ribitol-5-phosphate cytidylyltransferase"
                     /protein_id="HDC2863545.1"
                     /translation="LPKQFLDLDNKPILIHTLEKFILINDFEKIIIATPQQWMTHTKD
                     TLRKFKISDERIEVIQGGSDRNDTIMNIVKHIESTNGINDDDVIVTHDAVRPFLTHRI
                     IKENIQAALEYGAVDTVIDAIDTIVTSKDNQTIDAIPVRNEMYQGQTPQSFNINLLKE
                     SYAQLSDEQKSILSDACKIIVETNKPVRLVKGELYNIKVTTPYDLKVANAIIRGGIAD
                     D"
BASE COUNT         5902 a         3435 c         2792 g         6279 t
ORIGIN      
        1 ttttcaatca catagttcaa tatacatcat ttcgttatgt tttttaatac tttgttcaaa
       61 aacaaatatt ttattcttta aaataatgac ttttgtattt ttaatcacaa taaacatttt
      121 aaaattcttg ttatcataat cattaaaagg tattaacctt aataatatat tctctcgtct
      181 caaccttaat cgtatacttc agacgtctgt ttgtagacaa taaaagtcat tcacgtcttc
      241 atatgtcatc aaatgtttat catgacatga tgaatataat aatcgggtat ataactgtat
      301 gattaattac acaataaaga gaaggaatat aatatgaaaa aagtgtcaat taaagatgtt
      361 gctagagaag ctggtgtatc agttacaact gtgtcacata ttttaaatca taatgatagt
      421 cgtttttccg caacaacgat aaaaaacgta catgctgttt cagaacgttt aggctatgcc
      481 cctaataaac atgcaaaaca attgcgcggc agtaaaattc aaactattgg cgtcattttg
      541 cctagcttaa caaatccgtt tttctcagca ctgatgcaaa gtattcatga ccataaacca
      601 tctgatgttg atttatgctt tttaacatct acagcaactg atttgtatga caatattaaa
      661 catttaattg atcgaggtat tgacggatta attatcgcac aatacatatc atccccggac
      721 gccctaaata actatctaaa gaaacatcat gtaccttatg tcgtactgga tcaaaatgac
      781 catcaaggct atacagattt tgttcggaca aatgaatatc aaggtggaca acttgcagca
      841 caacatttaa tagaactcgg tcacaaccat atgataattg ttgcaccata tgacatgatg
      901 gcgaatatgt cgactcgtgt cgctggattt gtcgatactt tgcgcgcgaa tcaattgcca
      961 gaaccacaaa tcgtccatac tgaattatct aagcgcggtg ggctaaccat tgttgatgac
     1021 atcatggttc aatctgccac tgcaatcttc gctattaacg atgaactcgc tattggcatt
     1081 ttacgaggac taattgaaca tggcatcagt atcccgaaag atatctcatt aataggttat
     1141 gacgacattg attatgcagc gtacgtctcg ccacctttaa ctactgtggc acaacctata
     1201 actgatattg gcaaaacatc tttaacctta ttacttcaac gattacagca cttagataaa
     1261 tccattgata tgattgaatt accaacgact ttaaaaattc gtgcaacaac tggctatcat
     1321 ctttcaaact aactacgtat cttccgaaat atactcatca ttgttaggcc cttagcgttg
     1381 ctttaatgct gagggttttt aatcataatt attttactaa gaaattaaaa taataatgta
     1441 tgaattttta aatatgattt aaacgttttc agtttttatg aaaacgcatg cattttacaa
     1501 ataaaaatgg tacgatggca ctggtaaaac gttttactaa aaacaaatca tgaggtgtat
     1561 aacatgagca ttgttgcatt acttatcggg ttaggcccct taattggctg gggcttcttc
     1621 ccaacagtcg cttcaaagtt tggtggtaaa cctgtacatc aaattatcgg tgctactgta
     1681 ggtacgttaa tcttcgctat tatattagcc gtagtcacat caagtggctt ccctactgga
     1741 accaatttgc tattcgcctt attatcaggt gcaggatggg gattcggaca aatcattaca
     1801 tttaaagcgt tcgaattagt cggctcatct cgtgccatgc cagtcacaac agcattccaa
     1861 ttattaggcg catctttatg gggtgtcttt gcattaggaa attggccagg cattggtcat
     1921 aaaatcattg gatttacagc tttagtcgtt attctaattg gagcgcgtat gacagtttgg
     1981 agtgaacgca aagaagcaag taacgccaaa aatttacgtc gtgcagtggt acttctgtta
     2041 attggtgaat ttggatactg gttatattca gctgcaccgc aagcaacttc tattgatggc
     2101 ctaactgcct ttttacctca agcaatgggt atggtaattg ttgcagtcat ttatggcttt
     2161 atgaatatga aagcagagaa tccattccgt aataaaatta cgtggttaca aattatttca
     2221 ggtttcttct ttgcatttgg tgctttaaca tatcttattt cagcacaacc taatatgaat
     2281 ggtttagcaa ctggatttat tctttctcaa acatccgttg tgcttgctac attaactggt
     2341 atttatttct taaaacaaca taaaacgtca aaagaaatgg ttattacaat catcggctta
     2401 gtactcattt tagtagccgc ttctgttaca gtatttataa aataaggagt gtagatgtca
     2461 tgaaaaaatc agctgtttta aatgaacata tttcaaaagc aatcgcgaca attggtcatt
     2521 ttgatttatt aacgattaat gacgctggca tgccaattcc aaatgatcat cgtcgtatcg
     2581 acctagctgt aactaaaaac ttaccacgct ttattgatgt cttagctaca gtgttagaag
     2641 aaatggaaat ccaaaaaata tacttagcag aagaaataaa agaacataac cctacacaat
     2701 tgcaacaaat taaacaattg atttcatcgg aaatcgaaat cattttcatt cctcacgaag
     2761 aaatgaaaag taacttagct cacccattaa ataaaggtaa tattcgtact ggtgaaacaa
     2821 cgccctactc taatattgca ttagaatcga atgttacttt ttaaaagtta taacttgaaa
     2881 ggagcgtaca catgaccaac aaagttgtta ttttaggttc aacgaatgtc gatcaatttt
     2941 taacagttga aagatatgca caaccaggcg aaacattaca tgttgaagaa gcacaaaaag
     3001 cattcggcgg aggtaaaggt gccaaccagg ctattgccac tgcacgcatg caagcagaca
     3061 caacatttat tactaaaatt ggcactgatg gcgttgctga tttcatctta gaagatttta
     3121 aagtagctca tattgataca tcatatatta tcaaaacagc tgaagcaaaa acgggccaag
     3181 cctttatcac tgtgaatgca gaaggacaaa acaccatcta tgtttatggt ggtgcgaata
     3241 tgacgatgac acctgaagat gttattaacg caaaagacgc tataatcaat gcagactttg
     3301 tcgttgcaca attagaagta cccatcccgg ctattatatc tgcatttgaa attgccaagg
     3361 cacatggtgt gacgacagta ttaaatcctg caccagcgaa agcattacct aatgaattat
     3421 tatcattaat cgatattatt gtgccaaacg aaacagaagc cgaattgtta tctgggatta
     3481 aagtaactaa tgaacaatct atgaaagaca atgccaatta ctttttatct ataggcatta
     3541 agactgtttt gattacgcta ggtaagcaag gtacatattt tgctactaaa aatcaaagcc
     3601 aacacatcga agcttataaa gtaaatgcga ttgatacaac tgctgcaggc gacacattta
     3661 ttggtgcatt tgtcagtcgc ttaaacaagt cgcaagataa cttagcagat gctattgatt
     3721 ttggtaataa agcgagctca ctcactgtac aaaaacacgg cgcgcaagca tctattcctc
     3781 tactagaaga agtaaatcaa gtttaaatga atcaaacaca gctatgatat gaaggtttag
     3841 catataacat gcaacattcg tatatcatgg ctgtgctttt ttatctttat aaaacatcat
     3901 ctattagaaa taattttcca ctaaacctat gcttgttgac tcatgtttag ttataaatga
     3961 agtgacaatt ttttgtaatc tttttaactt ccaaattatc gcatataaat atgctatatt
     4021 aatgataata attatcaatt aaaaggaggt tatgctatgt ctaaagaagc tggtcataca
     4081 tttttagcta aattaggaaa aactcgtcta cgccccggtg gtaaagaagc aacagattgg
     4141 ttaatacaac aaggggcatt ttcacaagat aaacaagtgt tagaagtggc atgtaatatg
     4201 tgcacaacat ctatttatct agctcataca tatggctgtc acattcaagg cgttgatata
     4261 aataagaaag cattagaaaa agcacaggaa aacatttcag cagcaggtct tgaatcatat
     4321 attcaagttc aacaagcgaa tgctgttaaa ttgccctttg atgacaatca attcgatatc
     4381 gttttaaatg aagcaatgtt aacaatgtta cccatcgcca taaaggaaaa agcattacgc
     4441 gagtactacc gagtcttaaa gcctgggggt atcttgttaa cacatgatat tgtcatcgtt
     4501 aatgaatcac atgccacaca tgttgttaaa tcattatctg cagcaattaa tgtcaatgtc
     4561 tcaccgcaga cgaaacttgg ctggttagat ttatataatc aagctggttt taatcatgtg
     4621 cattatcata ctggtccaat gagtttaatg acaccaaaag gtttaattta tgacgaaggt
     4681 attgttggaa ctataaagat tatcaacaat gctttgaaaa aagaaaatcg accaatgttt
     4741 tgtaaaatgt ttaaaacgat gactaaattg cgtaaagata tgaattatat tacttttgtc
     4801 gctaaaaaag agcactaaat ataatgccac taactgtact ttgtatctat gtttgactat
     4861 cactttaatt tctttgtgac actaatcatc tacttaacaa tatcgttatc gttgattagt
     4921 aagtcatcaa ttttggttaa agactttcat aaacactcaa acattaacac tatacatagt
     4981 tagtggcatt atttttttct taaaatttta acatcacggg attggaacag aaatgatatt
     5041 ttcgcaaaat ttatttctgt ccttccccaa cttgcattac ctgtagaatt tcttttcgaa
     5101 tttctctgtg ttggggcccc gccaacttgc attacctgta gaatttcttt tcgaaattct
     5161 ttgtgttggg ggcccgccat tataacactg taggtcctac tatattaatt tatgtctcgg
     5221 gctctaaccc taaaatactt ataatatacc tttataattt atctccattt gatgctatca
     5281 cttgttgata ccaatagaac gaatcttttt tcaagcgttc catcgtgcca tgaccatcat
     5341 tatctcgatc aacatatatt aaaccatagc gtttcttcat ttcaccggtt gtaaatgaaa
     5401 caatatcaat gattccccac ggtgtataac cgattaaatc tacaccatct tgatcaactg
     5461 cttctatcgc tgctgtaata tgtgctttta aatattcaat gcgataatca tcatgaatat
     5521 gtccatctac cacttcatca actgcaccaa aaccattttc cacaataaaa agtggtaact
     5581 gataacgatc atataacaca ttcaatgtat atcttaagcc atctggatca atcgcccaac
     5641 cccaatcact cgttgcgata tgcggattct ccacagaatg attcaaacca ccgttgacga
     5701 tgttgttttc aactgtagta tcaacatcat gttttacagc cgtagacatg taataactaa
     5761 agccaatata atcaaccgtg ccctgctgta aaatactgtc gtccccttct tgccatccaa
     5821 catcatatcc ttttcgtgcc aacatttttt tagcatagct tggataataa cctctcactt
     5881 ggacatccgg gaaaaagaaa cgtaagcgat tcgcaatttg tgcttccatc atatctttcg
     5941 gatgacacga atatggataa atgggtacat gtgaaatcat tgttccaatc ttaaacttcg
     6001 gattaatctc tttaccaaga cgaactgcta aagcactggc taaaagttca tgatgtgcta
     6061 cttgatacaa gacttcttca ggattatcat tttctgtcaa tgctacccca gaattcgtcc
     6121 ataaaaagat aggatttgat gtgtccatct gattattaat ttcattaaac gtcatccaat
     6181 atgtaacttt atctttatat ctttcaaata caacacgcgc aaaatgcaca aaataatcga
     6241 caacttctct atttctaaat ccaccataat gtttcgctaa atgaagtggc atctcaaaat
     6301 gtgataacgt cacaacaggt tcaatacctt gtgcaattaa ttcatcaaag atacgatcat
     6361 aaaaggcgag tccttcttca tttggcacat cttcatcccc attcggaaag atacgtgtcc
     6421 acgcaatcga cgtacgtaaa catttcaatc ccatttcttt aaacaaggca atatcttcct
     6481 tataacgatg ataaaaatca ataccttcat gatttggata atagtgattg ggatctatag
     6541 attctgtaat ctgacgtgct ttgccatgtg caccactcgt cataacatca attacactta
     6601 accctttacc acctttatca tatccacctt caaattgatt tgcggcaaga gcgccacccc
     6661 acatgaaatt ttgcggtaat tttgtcatta ttacaacaca ctcctagttt ttaaatattt
     6721 taaaaataac atcttcagtc gtaatgattt cattcattgt cagttctact tttcctaaat
     6781 cggcagagtt gctaataacg acaataacgt cagcattgta gccttgttgt tgtatatatt
     6841 gctggtcgaa ttgcaacaac gtttgccctg cttcaacatg atcattttgc tttacaaagc
     6901 acttgaaccc tttaccttcc aagtcaactg tattcacgcc aatatgaatg actatgtcca
     6961 caccgtcttc tgattgaata ccaactgcat gcttagttgg tacaatcata gatattaaac
     7021 cattgaacgg tgcgattact ttggattctt catgagcttt gattgctaag ccttcaccta
     7081 ccattttctc tctaaaaatt gaatctctta cttctttaag taaaatacga cgaccagcga
     7141 ttggtgcttt cactaaaatt ggtgttgtta cttttacttg aggtgtataa cttgtatctt
     7201 gactattaat attgtcagta ttctcactct cttcgacatt agcattctta attaatcgct
     7261 gtaattgctg atacacttca tcgacatttc catttaattt tatgactaac tgcgtatcat
     7321 tttctgctac agatgtcaca tcaactattt gtttcacttc atttgctgta gaaggaattg
     7381 tatgttgcat atgaattgta atgcacttcg tatcatacgt tgcatcaaca atgttttcga
     7441 caccacctac agctgtaaga atgtcttggg cttgttcttt atatttattg ctcataaata
     7501 ttaccccctc aacttgatag tagaatgaaa atgtatttac ttacctccaa ttataattgt
     7561 accggttcaa tttgtaaacg ccgatacaat tataatattt tgtgctataa taattacaga
     7621 caaagtgaaa cgaggacaga atattgttaa agtatgaaca tattgctaag caacttaatg
     7681 cgtttataca tcaatctaat ttcaaacccg gtgataaatt gccaagcgtg acgcaattaa
     7741 aagaacgtta tcaagtaagt aagagtacta tcattaaagc attaggctta ttggaacaag
     7801 atggtttgat ctatcaagca caaggcagtg gtatttatgt gagaaatatt gctgatgcca
     7861 atcgtatcaa cgtctttaag actaatggtt tctctaaaag tttaggtgaa caccgaatga
     7921 caagtaaggt acttgttttt aaggagattg caacgccacc taaatctgta caagatgagc
     7981 tccaattaaa tgcagatgat accgtctact atttagagcg attaagattc gtggacgatg
     8041 atgttttatg tatcgaatat tcttattatc ataaagaaat cgtgaaatat ttaaatgatg
     8101 atattgctaa gggctctatc ttcgactatt tagaatcaaa catgaaactt cgtattggtt
     8161 tttcagatat tttctttaat gtagatcaac tcacttcaag tgaagcttca ttactacaat
     8221 tgtctacagg tgaaccatgt ttacgttacc accagacttt ttatacaatg actggcaaac
     8281 cctttgattc atctgacatc gtatttcatt atcgtcatgc acagttttat attcctagta
     8341 aaaagtaata aatacataaa aacgtctata tcccagttat aaactggagt atagacgttt
     8401 ttttacgata ataacaatgg ctcaaattgc tattatcttg cttaggtttt tcgttttaga
     8461 agaatattgc tacaaagaca ggcacaactg ctacaacaac tacaccaact aacactaaag
     8521 ctatacttgc cattgattct tctacaggtc ctaattcttt ggctggtgct acacctaatg
     8581 tgtgaccact tgttccaagt gctaatcctc gggcaatagg gttagtaatt cggaaaagct
     8641 ttaagaattt attacctagg gcataaataa tgacaccatt taaaataact gctaatgatg
     8701 ttaattcttt tataccaccg ataccagctg atactggtaa cgcaatcgct gtagttgctg
     8761 cttgaggtaa cattgataaa ataacatcat tggcaaattg tgctaacttc gcaaaagtta
     8821 aaataattaa taacgctaca actgtaccga taccaatacc tccgatgata cgatgccaat
     8881 gtttaacaag cacttcacgc tttttatata acggaatcgc aaaacagatt gttgccggtt
     8941 ctaagaagaa gtaaataatg tctccaccta ttttgtaagt cttatacgga atgcctgtta
     9001 aatagaggaa ggccacacca aataccatac tgacaaatag cggtgcgaat aagaagaaac
     9061 gattagtttt ttcaaataat atggtcgcta agaaaaatgg tataacggat aacagtattc
     9121 cgaagtaagg tgtgtttagt gctaagtggt taatcatgag cttgtgcctc ctctattttg
     9181 atcttttttg tgactttgtc acctttagat ctcgaagtaa ctttcataat aatttgtgtg
     9241 acatagccag tacaaataag taatagtatt gttgagacga ttattagtcc aatgattaaa
     9301 aatggtgctt ggctaatgac acctaaagag ttaacaactg agataccggc tggtacgaag
     9361 agtaagccaa tgttatttgt tagtgtcgtt cctacttttt cgacttcgcc taacttaaca
     9421 gcaccagtac ataataatac aaataataat actaaaccga ttactgatgc aggcatagga
     9481 attggcataa atgattcaat tattttcgat acaaagagta ctaaagcaat tacaatgact
     9541 tggtgaaaaa agtgtgctgg ttttgatgcg tctttttgtt gtttcacgac cattgcctcc
     9601 tacgtttgat ttaactaaag tatagatggc tcacttcgat ttgcgtgatt tttagtccga
     9661 aatacaaaat atcataggta aaatgcataa aaaaaaggat tactgttaaa gtaatcctat
     9721 cgacgcttta aaatctttca taaatgaacg tccaacttgc atcttgacac catttgtcaa
     9781 tattaccata taagtatagt taaaccattg ttgcacttct ttaatgtgtt tcgtgttaat
     9841 aatatatgaa cgatgaatac gtataaaata agtgggattc aatcgttttt cataacgatt
     9901 caatggctct gttgtttcgt atttatgatt cgttgtatgt atggttgtaa taccattatg
     9961 tgtgccaatc ccaataatat tttgttgctt taacatgtga attttatcgt caatttcaac
    10021 aggtaagctt tgatcaaaat tcgccgacat atcattcgca attgcacttg cgttattatc
    10081 atctttggct ttagtcgcac gcactttatt gactgcttgt tcaatacgtt tttgaccaaa
    10141 cggtttcaaa atatagtctg tcgcatttaa ttcaaatgcc tgtactgcgt attggtcatg
    10201 tgcagttgca aaaataatcg caggtggctc tttcatcttt tgaatcttag ctcctaattc
    10261 gatcccattt tcatccatta aattgacatc taaaaatata atgtcatatt gattgatcag
    10321 tagtgcttcc aatgtttctt ttacattttc tgcctcatta atttcttcaa aaccaccaat
    10381 ttcatttaat aaatatgtta attcattacg tgctaatggc tcatcatcta tgattaatgc
    10441 tttcatattt attcctcctc ttgtctttca taaggaagta cacaccaaaa agtggtaccg
    10501 ctcgatgtcg attcaaattg taatgctgcg gattttccaa ataatccttt taggcgtaag
    10561 tttaaatttt ctaaagcact accagttcca gactctgatt ctacagatgt ttctcccaac
    10621 aaatgcattt tatctttaga aataccctga ccattatctt gtacaataat acgtacatgt
    10681 gttgcagttt ctttaatcac tgacacgtca atatcgttac cttgctttcg attcgtaaac
    10741 gcatgtttga tggcattttc aactaaaatt tgaattaaaa atggtggtac aagcacatcg
    10801 cgatatttgt cttcaacatt aatattgata ttaaatcttc ctggataacg tgcttgttcg
    10861 agtgataagt atgcacgcac ttgacttaac tctttatcta aagtaatcgt atgttgctta
    10921 gagccttgta aattcgctct gaaaaaataa ctcaattcta atagtaactc tcgtgccttt
    10981 tcgctattta ttctaactaa agctgagatc gtgttaattg aattgaagaa aaaatgtgga
    11041 ctcacttgtg cctgtaatga cttaatctca gcatctttca ataacttact ttgcgtttcg
    11101 gcttcaccaa gttcaatttg gctactaaaa atatttgcca atccttctgc aagttgacgt
    11161 tccacaaaag ttaaatcatt agggtttgta aaatacatct tcaatgtacc gacgatagaa
    11221 ccatgcatct caagtggtat cacgatagct gctctaagcg ggcaattcgg atgactacaa
    11281 ccaatctctt ctttagtatg aacttctttc aactttcctg atttcaatac atctttagac
    11341 agacttgtta atatttcatt tgttggtatg tgatgatcac tacctgcacc tacatgcgat
    11401 aagatttcat ttttgcttgt aattgctacg gcagatactt tcattaaatt tttaataatc
    11461 atcgcaattt gctgtgccga ttctctattc aatccttctt taaaatacgg caatgtctgg
    11521 ttcatcaatt gcagtacatc atgtgtttga acagccttca tttgctcctc ttgctttaat
    11581 gttgaaatga taatagacat aaaaatcgcc gtaccaacgc tattaacaat aatcattggt
    11641 agtgcaatta atgatatgag gtcaaccgca tatgctttgt cgtgggaaaa tgttaaaatg
    11701 ctcaacattt gaatcatttc cataacaatt ccaatcatgg cacttttcgc aatactcggg
    11761 taacgcttgc gtctttgagc ttgtaagcca aaataaccag caattatacc aataaatata
    11821 gatgagataa gataaacttg tgcatccgcc ccacccatat acactctgaa aatacctgaa
    11881 ataacgccaa caaatagacc tacaaaaggg ccaccaacta atcctgcgac acctatcgtt
    11941 aatacacgtg tgttagctaa agatacatca tcatctaaac ggaagtacac acttcctgac
    12001 aaactatgtt gatgatcgat gacgatacca gttaaattag acattaaggc aaacaaactg
    12061 aaaataatac ataattgcca acgtgctttc catgtacgtc gacgattcat taagttttta
    12121 aaatatggaa tattcatcaa cacataggcc aaaataataa ttaaacctac acgctcaagt
    12181 aataacattg ttagcgatag cacgatagca cctcagtgaa ttataattat gtttatttta
    12241 tcataatagt gcatgtaaaa ttcatgaata aattattaaa aaaacacgct actatttaat
    12301 tatctatacc attaaatttt catatcaatt tttatgctaa gttgaccatt tttcttttca
    12361 aataatgctg tttatgtcac tattatgact tttatacata gcgaaaaact gctggactta
    12421 tttttgccaa cagtttctaa tcgcgttatt tatgatactt ttttaaataa tacgtgattc
    12481 tctaaatgta cgtgttcatg tgttaacact tcaagtgctt ttaatctctg ataaacaagt
    12541 cgccaagtac cacacgcttc tatcggaggt tcataactag atgttaattc gctcattttt
    12601 actaacaatt ctcccgttgc aatgtggtct gaaactaaat catctatcac agtattaata
    12661 tcgtctacta cctcaccttg ctcatattta atgagttttg gaaaatcgac atcgtcttct
    12721 ttttgcatat gctctaacat gccattttta aatgtatcgt atgtttcttt taactcaact
    12781 aaatatggat gattaggtcc atgtactttc gataacttcg tcacataagg tgttaaattt
    12841 ttaaattctt ctcttagagg ttcatgatat gctgattgaa tatattgaat aagtgatgaa
    12901 acatttaaaa atttaggatt taacgaacct ggtgtattcg tttgttcaac gtcgttgaga
    12961 cgctgtaata attcgttcaa atctacattt ttcttttcta aggctgctgc ttctatactt
    13021 acttgtccgc cacaacaaaa atctattccc acacttctaa aaatatccgc tgctttcgga
    13081 taatcagtta ctacatctgc tactatgtca tttttattta tcattataga taacctcctc
    13141 atttccagtg tatacaattt aatgtatatg aaaatgaaaa tcagggaaat gtcataatca
    13201 tgtcataaac agcaaaataa agccctcaaa tcatgttggc tcacaatgat ttgagggcat
    13261 ttattattta tttagtggat aagtgatatg tgcagtgttt aacttaacaa tatttttgaa
    13321 gtctcgcttt ttaatatctt tgctaagtaa gatttgcact tcgttttctg atgtttggct
    13381 taacattccc atcaccatgt cgtcttttag tacgacacta gccatacctt cttcaaatac
    13441 ataaccacga tccagaccag ttaaaatgat tttgttttta ccttttaact tcaatgagat
    13501 tgaatccgtt aatgtaatag ctgtaaagta taacgaaatg ttattaaagt cttttgtgaa
    13561 atacggtgtt aatctataaa aatcattatt caaatgaatt aatgcacttg tttctgcagt
    13621 atatgcatat ttattacgtt gattaccaac acgcacttca aatacttccg tacctatttg
    13681 gacttctaag aaaacatccc aaattttttc tttaggtaaa tacgctttaa tatcttctaa
    13741 cataatgtta aaacgatatt gtttattcgc attgacactt aaaggtacat acattgtgtg
    13801 cttcttgttt cgtgaatgta atttaagtct gacatcataa tgtccttcgc caatcataaa
    13861 ttcatttaac gttagctctg taacaatttt atgattatca aatttaaatg ctgtcatttt
    13921 cacttttggc ttagcgatat caatgccttt aaagtatggt tcgccttcat tgaattgaat
    13981 gtttaattta ccatctacaa tatcaaaacg gtagtattga ccttgacggt aactttcttc
    14041 cacagttcta tagttgtcta tatctttcgc tctcgcgtag tgcaacaatg gtcgtaattt
    14101 actcatcacc aatgcatcta cacgttctgg aactgcttgt ataaagtctc ctagagcatt
    14161 aatccattgt ggttgatctt ctagtttaac tttaagtgag aagccattcg tacgagaaaa
    14221 actaaaatga cgatttaaaa attctgctaa gatttgattt ttatgggctt cttctaaatc
    14281 tgcatttaat atttctacag caatcaatct catgacttca taaaagtctt caggtgaaac
    14341 atacgcacta ctcatatgtt caccttcacg ctttgtagca taataatacg ctttatcact
    14401 taacacactg attcgatttg catttaaata tgctttcatt gtaaataatt gatcttctgc
    14461 actctttaat tcttctggaa aataaatgtc attatctttt agtaatgctg ttctatagat
    14521 tttagtcggg cttaaagtat agataattct tgaatttaac aaagtaactt caggtgctgt
    14581 ttctttaaac atagattgtg gtacaccacg accattaaca cctttcattt taatcaataa
    14641 gacatctgag tgatgttcat caataaatgc tgctgcatcc tttaaagtct ctttgtttat
    14701 atagtcatcg gagtccacaa ataatacaaa ttcaccttct gcttgtttta acgccacatt
    14761 tctaggttta cctggaccac cagaatttgt ttcgagttga cttactttca agttcaattt
    14821 attgcgatac ttttcaacta tttgtaacgt ttgatctgtt gaacagtcat caactacaac
    14881 cacttcaaat tcagttttcg gaaaatcttg tttcgcaagg ctattaagta attctgttat
    14941 atacttttct gaattgtatg ttggaactat tactgaaaat ttcatcatta tacctctccc
    15001 actttgacta ctatataaac ttagctacca aataaatttc tgactaaacg ctcacttgat
    15061 cggccatctt gatatttaaa atgtttatct aagaatggaa tgactttttc tccttcataa
    15121 tcttcattgt ccaaggcgtc cattaatgcg tcaaatgatt gcacaatttt acctggaaca
    15181 aatgattcat atggttcata aaaatcacgc gtcgtaatat aatcttctaa atcaaatgca
    15241 tagaaaatca ttggcttttt aaatactgca tattcatata ttaaagatga atagtcacta
    15301 attaataaat ctgttatgaa cagtatatca ttaacttctc taaagtcaga aacgtcaaca
    15361 aaatattgtt tatgtttgtc tgcaatatta agtctatttt tcacaaatgg atgcatttta
    15421 aataatacaa ccgcgttatt tttttcgcaa tatcttgcta aacgttcaaa atcaattttg
    15481 aaaaatgggt aatgtgctgt accatgacca ctacctctaa atgttggtgc gaaaagaatg
    15541 actttcttac ctttaataat tggtaattca tcttccatct cttgtttgat ctgtgtcgca
    15601 taagcttcat caaatagtac atcagtacgt ggaacacctg taggcactac atttttctct
    15661 ttaataccaa atgcttcagc gtagaatgga atatcggttt cagatgatac ataagctttt
    15721 gtatagctac gatgatttaa tgaatcaata aatggtccac cctttttacc agtacgacta
    15781 aagccaactg ttttaaaggc accaacggca tgccatactt gaataacttc ttgagaacgt
    15841 ctaaaacgca ctgtataaat caatgggtga aagtcatcaa caaagatgta gtctgccttc
    15901 ccaagtaaat atggcaatct aaacttgtcg atgatgccac gtctatctgt aatattcgct
    15961 ttaaaaacag tgtgaatatc atacttttta tctaaatttt gacgtaacat ttcgttatag
    16021 atgtattcaa agtttccaga catcgttggt ctagagtctg atgtgaacaa caccgtattc
    16081 ccttttttca agtggaaaaa tttcgtcgta ttaaatatcg ctttaaaaat aaattgtctt
    16141 gtattaaatg attgtttgcg gaaatactta cgtaattctt tatatttacg aacgatataa
    16201 atacttttaa cttccggagt cgttacaaca acatcaagga caaattcatt aacatcgcta
    16261 gaaatttcag gtgtaacagt ataaaccgtt ttcttcgaaa tgccgccttt tctaaattct
    16321 tttaggtaag tctgcaataa gaaattgatt ttaccatttt gtgtttctaa ttcgttgtat
    16381 tcttcttctt gttctggctt tagattttga tatgcatcat taatcacatc tgggtttaac
    16441 tgtgcaatat aatcaagttc ttgctcattc actaataagt acttatcttc aggtaagtaa
    16501 taaccattat ctaagatagc tacattgaaa cgacaaacga attgattccc atctattttg
    16561 acatcattcg ccttcattgt acgtgtctca gttaaatttc ttaatacaaa attactatct
    16621 tctaaatcta ggttttcact atgtccttca acgaataact gaacacgttc ccaatagatt
    16681 ttatctatat atatcttact tttaaccaac gttaattcat ccttttctat ttacataatc
    16741 cattttaata ctgttttacc ccaagatgta gacaggtctg cttcaaaagc ttctgtaaga
    16801 tcattaattg ttgcaatttc aaattcttga ccttttaaca acgctaattt atctacaata
    16861 tctgggtatt gaatgtataa gtctacaaca tcttggaaat cttttgaacc acttcgacta
    16921 ctaccaatca acgttagtcc tttttccaat actagacgtg tattaacttc tactgggaac
    16981 tcacttacac ctaacagtgc aatgcttcct tctggtgaaa tgtaatcgat catttgattt
    17041 atggctgatt gactaccgcg accacccaca cactcaaatg catgatcaaa tgttaagcct
    17101 tcaggtattt tattaataaa gaagacatca tcaacaaatg agaagtgact caatttataa
    17161 tctgttttac caaagacata tattttagac tctggatata atttacgtaa taaaatggct
    17221 gtaatgtaac ctaagttacc atcaccccaa ataccaaatg tatttttatt tgaaatagat
    17281 ttcttttcaa aacgacgaat agcatgcaaa cttactgtta caagctctgt atatgaaata
    17341 atacttaaat caatatcatc aggtagtggt acagctctat catgatttag caacacaaaa
    17401 tcttgcataa acccatcatg tccacttgat ctgaagtagc tcgattttaa atagttttca
    17461 gcaatgacat cgtctttttc tgtcggcgta ttcggtacca taactacttt tgtaccttta
    17521 ttaaacacac ctttactgtc aaatacgacc tcaccaacac cttcatgaat taaagacatt
    17581 ggcaatttct gagataagac attctcatca cggctaccag tataatatct ttgatcggca
    17641 gcacaaattg acatatataa aggacgtaca atgacatagt cactgtaaat atctacgttg
    17701 ttatacgtaa cttcaaattg tctaggtgca actaattgat atacttgatt aatcatcggc
    17761 aataccacct cgaataatag cattcgctac ttttaaatcg taaggtgttg ttactttaat
    17821 gttatataac tcacctttta caagtcgaac cggtttgttt gtttctacaa taatcttaca
    17881 agcatcagat aaaatactct tttgctcatc actcaactgt gcatagcttt cttttaataa
    17941 attaatatta aacgattgag gtgtttgacc ttggtacatt tcattacgca ctggaattgc
    18001 atcaatcgtt tgattatctt tagatgtaac aatcgtatct atagcatcaa tcactgtatc
    18061 tactgcaccg tactctaaag cagcttgaat attttcttta ataatacgat gcgttaaaaa
    18121 tggtctaact gcatcatgtg tcacaatgac atcgtcatcg ttaataccat ttgttgattc
    18181 aatatgttta acgatattca taattgtatc gttacgatcg ctaccacctt gaatgacttc
    18241 aattctttca tcagaaattt tgaattttct aagtgtatct ttcgtatgcg tcatccattg
    18301 ttgtggcgtc gcgataataa ttttttcaaa atcattaatt aaaataaatt tttctaatgt
    18361 atggattaaa atcggtttgt tgtctaaatc taaaaattgt ttaggtaa
//
LOCUS       DALPQQ010000045        18216 bp    DNA     linear   BCT 22-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus strain K18-6-464
            SAMD00233528-rid16434743.denovo.045, whole genome shotgun sequence.
ACCESSION   DALPQQ010000045 DALPQQ010000000
VERSION     DALPQQ010000045.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMD00233528
            Sequence Read Archive: DRR236061
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 18216)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 18216)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001543423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001543423.1
            Genome Coverage       :: 77x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/22/2022 17:09:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,811
            CDSs (total)                      :: 2,743
            Genes (coding)                    :: 2,689
            CDSs (with protein)               :: 2,689
            Genes (RNA)                       :: 68
            rRNAs                             :: 2, 4, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 4, 2 (16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 54
            CDSs (without protein)            :: 54
            Pseudo Genes (ambiguous residues) :: 0 of 54
            Pseudo Genes (frameshifted)       :: 27 of 54
            Pseudo Genes (incomplete)         :: 27 of 54
            Pseudo Genes (internal stop)      :: 10 of 54
            Pseudo Genes (multiple problems)  :: 10 of 54
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..18216
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMD00233528-rid16434743.denovo.045"
                     /strain="K18-6-464"
                     /db_xref="taxon:1280"
                     /geo_loc_name="Japan: Niigata"
     gene            complement(668..1525)
                     /locus_tag="O7798_001280"
     CDS             complement(668..1525)
                     /locus_tag="O7798_001280"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500873.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Cof-type HAD-IIB family hydrolase"
                     /protein_id="HDC2863546.1"
                     /translation="MDNVKAIFLDMDGTILHENNQASTYTKDVINQLREKGYKVFLAT
                     GRSHSEIHQLVPQDFAVNGIISSNGTIGEVDGEIIFKHGLSLAQVQQITNLAKRQQIY
                     YEVFPFEGNRVSLKEDETWMRDMIRSQDPINGVSHSEWSSRQDALAGKIDWVTKFPEG
                     EYSKIYLFSSNLEKITAFRDELKQNHVQLQISVSNSSRFNAETMAYQTDKGTGIKEMI
                     AHFGIHQEETLVIGDSDNDRAMFEFGHYTVAMKNARPEIQALTSDVTAYTNEEDGAAK
                     YLAEHFLAE"
     gene            complement(1593..2375)
                     /locus_tag="O7798_001281"
     CDS             complement(1593..2375)
                     /locus_tag="O7798_001281"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500874.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HDC2863547.1"
                     /translation="MLIQLDQIGRMKQGKTILKKISWQIAKGDKWILYGLNGAGKTTL
                     LNILNAYEPATSGTVNLFGKMPGKVGYSAETVRQHIGFVSHSLLEKFQEGERVIDVVI
                     SGAFKSIGVYQDIDDEIRNEAHQLLKLVGMSAKAQQYIGYLSTGEKQRVMIARALMGQ
                     PQVLILDEPAAGLDFIARESLLSILDSLSDSYPTLAMIYVTHFIEEITANFSKILLLK
                     DGQSIQQGAVEDILTSENMSRFFQKNVAVQRWNNRFSMAMLE"
     gene            complement(2607..4412)
                     /gene="glmS"
                     /locus_tag="O7798_001282"
     CDS             complement(2607..4412)
                     /gene="glmS"
                     /locus_tag="O7798_001282"
                     /EC_number="2.6.1.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500875.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamine--fructose-6-phosphate transaminase
                     (isomerizing)"
                     /protein_id="HDC2863548.1"
                     /translation="MCGIVGYIGYDNAKELLLKGLEKLEYRGYDSAGIAVVNDDNTTV
                     FKEKGRIAELRKVADSSDFDGPVGIGHTRWATHGVPNHENSHPHQSSNGRFTLVHNGV
                     IENYEELKGEYLQGVSFISETDTEVIVQLVEYFSNQGLSTEEAFTKVVSLLHGSYALG
                     LLDAEDKDTIYVAKNKSPLLLGVGEGFNVIASDALAMLQVTSEYKEIHDHEIVIVKKD
                     EVIIKDADGNVVERDSYIAEIDASDAEKGVYAHYMLKEIHEQPAVMRRIIQEYQDAEG
                     NLKIDQDIINDVKEADRIYVIAAGTSYHAGLVGKEFLEKWAGVPTEVHVASEFVYNMP
                     LLSEKPLFVYISQSGETADSRAVLVETNKLGHKSLTITNVAGSTLSREADHTLLLHAG
                     PEIAVASTKAYTAQIAVLSILSQIVAKEHGREADIDLLRELAKVTTAIEAIVDDAPIM
                     EQIATDFLETTRNAFFIGRTIDYNVSLEGALKLKEISYIQAEGFAGGELKHGTIALIE
                     EGTPVVGLATQEKVNLSIRGNVKEVVARGAHPCIISMEGLEKEGDTYVIPHVHELLTP
                     LVSVVALQLISYYAALHRDLDVDKPRNLAKSVTVE"
     gene            5093..6631
                     /locus_tag="O7798_001283"
     CDS             5093..6631
                     /locus_tag="O7798_001283"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500876.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS mannitol transporter subunit IICB"
                     /protein_id="HDC2863549.1"
                     /translation="MSQTEEKKGIGRRVQAFGSFLSSMIMPNIGAFIAWGFIAAIFID
                     NGWLPNKDLATLAGPMITYLIPLLIAFSGGRLIYDLRGGIIAATATMGVIVALPDTPM
                     LLGAMIMGPLVGWLMKKTDQLIQPRTPQGFEMLFNNFSAGILGFIMTIAGFKILAPLM
                     KFIMHILSVAVEALVHAHLLPLVSILVEPAKIVFLNNAINHGVFTPLGADQAAKAGQS
                     ILYTIESNPGPGLGILLAYMIFGKGTAKATSYGAGIIHFLGGIHEIYFPYVLMRPLLF
                     IAVILGGMTGVATYQATGFGFKSPASPGSFIVYCLNAPRGEFLHMLLGVFLAALVSFV
                     VAALIMKFTREPKQDLEAATAQMENTKGKKSSVASKLVSSDKNVNTEENASGNVSETS
                     SSDDDPEALLDNYNTEDVDAHNYNNINHVIFACDAGMGSSAMGASMLRNKFKKAGIND
                     ITVTNTAINQLPKDAQLVITQKKLTDRAIKQTPNAIHISVDNFLNSPRYEELLNNLKK
                     DDQA"
     gene            6666..8798
                     /locus_tag="O7798_001284"
     CDS             6666..8798
                     /locus_tag="O7798_001284"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500877.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BglG family transcription antiterminator"
                     /protein_id="HDC2863550.1"
                     /translation="MLLSTREKEMIALLIKYHGQYITIHDIAQQLAVSSRTIHRELKG
                     VEAYLTSFSLTLERANKKGLRIAGTDSDLNDLKQSIAQHQTIDLSVEEQKVIIIYALI
                     QAKEPVKQYSLAQEIGVSVQTLAKMLDDLELDLNKYQLSLSRKRGEGIYLVGTESKKR
                     EFLSQLMVNNLNSTSVYSVIENHFVFHSLNQIHKDFVDLERIFNVERLLMDYLSALPY
                     QLTESSYLTLTVHIVLSISRIKNGEYVALNDDIYDSVQNTFEHKVASELADKLGQIYD
                     VTFNQAEIAFITIHLRGAKRKNLNDTSLNNRCEENKIKAFVNKVEMISGMTFADLDTL
                     VDGLTLHLNPAINRLQANIETYNPLTDMIKFKYPRLFENVRLALNDCWPDLIFPESEI
                     AFIVLHFGGSIKNQGNRFLNILVVCSSGMGTSRLLSTRLEQVFSEIERITQASVSDLK
                     SLDLSQYDGIISTVNLDIDSPYLTVNPLLPDSDISYVAQFLNTKSTFQETHDKSSNMI
                     DKDDVHVETKDVDGNTSFENEQTSYLTSVFEKHLSDEKSEQLLHHMRSGLTLLDSVKI
                     VSTEVKQWQTYIADYLYQCDVINDPTSFAELLEQRLIDNPGWILSPYPVAIPHLRDNM
                     IKHPMILITVLEEPLTLPSIQNDNQTIKYMISMFISDNDFMASLVSDLSEFLSLKLES
                     IDTFMENPQELETLLRNKFLERIKKQFI"
     gene            8810..9244
                     /locus_tag="O7798_001285"
     CDS             8810..9244
                     /locus_tag="O7798_001285"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500878.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS sugar transporter subunit IIA"
                     /protein_id="HDC2863551.1"
                     /translation="MSELFSNDNIFLNVNVNSQNEAIEKAGKALVDSGAVTDAYIQAM
                     KDREQVVSTFMGNGLAIPHGTDEAKTNVIHSGLTLLQIPEGVDWDGEVVKVVVGIAGK
                     DGEHLDLLSKIAITFSEEENVDRIVQAKSAEEIKQVFEEADA"
     gene            9244..10350
                     /locus_tag="O7798_001286"
     CDS             9244..10350
                     /locus_tag="O7798_001286"
                     /EC_number="1.1.1.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500879.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="mannitol-1-phosphate 5-dehydrogenase"
                     /protein_id="HDC2863552.1"
                     /translation="MKAVHFGAGNIGRGFIGYILADNNVKVTFADVNEEIINALAHDH
                     QYDVILADESKTTTRVNNVDAINSMQPSEALKQAILEADIITTAVGVNILPIIAKSFA
                     PFLKEKTNHVNIVACENAIMATDTLKKAVLDITGPLGNNIHFANSAVDRIVPLQKNEN
                     ILDVMVEPFYEWVVEKDAWYGPELNHIKYVDDLTPYIERKLLTVNTGHAYLAYAGKFA
                     GKATVLDAVEDSSIEAGLRRVLAETSQYITNEFDFTEAEQAGYVEKIIDRFNNSYLSD
                     EVTRVGRGTLRKIGPKDRIIKPLTYLYNKDLERTGLLNTAALLLKYDDTADQETVEKN
                     NYIKEHGLKAFLSEYAKVDDGLADEIIEAYNSLS"
     gene            complement(10669..18105)
                     /locus_tag="O7798_001287"
     CDS             complement(10669..18105)
                     /locus_tag="O7798_001287"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500880.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1542 domain-containing protein"
                     /protein_id="HDC2863553.1"
                     /translation="MNLFRQQKFSIRKFNVGIFSALIATVTFISTNPTTASAAEQNQP
                     AQNQPAQPADANTQPNANAGAQANPTAQPAAPANQGQPAVQPANQGGQANPAGGAAQP
                     NTQPAGQGNQADPNNAAQAQPGNQATPANQAGQGNNQATPNNNATPANQTQPANAPAA
                     AQPAAPVAANAQTQDPNASNTGEGSINTTLTFDDPAISTDENRQDPTVTVTDKVNGYS
                     LINNGKIGFVNSELRRSDMFDKNNPQNYQAKGNVAALGRVNANDSTDHGNFNGISKTV
                     NVKPDSELIINFTTMQTNSKQGATNLVIKDAKKNTELATVNVAKTGTAHLFKVPTDAD
                     RLDLQFIPDNTAVADASRITTNKDGYKYYSFIDNVGLFSGSHLYVKNRDLAPKATNNK
                     EYTINTEIGNNGNFGASLKADQFKYEVTLPQGVTYVNNSLTTTFPNGNEDSTVLKNMT
                     VNYDQNANKVTFTSQGVTTARGTHTKEVLFPDKSLKLSYKVNVANIDTPKNIDFNEKL
                     TYRTASDVVINNAQPEVTLTADPFSVAVEMNKDALQQQVNSQVDNSHYTTASIAEYNK
                     LKQQADTILNEDANHVKTANRASQADIDGLVTKLQAALIDNQAAIAELDTKAQEKVTA
                     AQQSKKVTQDEVAALVTKINNDKNNAIAEINKQTTAQGVTTEKDNGIAVLEQDVITPT
                     VKPQAKQDIIQAVTTRKQQIKKSNASLQDEKDVANDKIGKIETKAIKDIDAATTNAQV
                     EAIKTKAINDINQTTPATTAKAAALEEFDEVVQAQIDQAPLNPDTTNEEVAEAIERIN
                     AAKVSGVKAIEATTTAQDLERVKNEEISKIENITDSTQTEMDAYNEVKQAATARKAQN
                     ATVSNATNEEVAEADAAVDAAQKQGLHDIQVVKSKQEVADTKSKVLDKINAIQTQVKV
                     KPAADTEVENAYNTRKQEIQNSNASTTEEKQAAYTELDTKKQEARTNLDAANTNSDVT
                     TAKDNSIAAINQVQAATTKKSDAKAEIAQKASERKTAIEAMNDSTTEEQQAAKDKVDQ
                     AVVTANADIDNAAANNDVDNAKTTNEATIAAITPDANVKPAAKQAIADKVQAQETAID
                     GNNGSTTEEKAAAKQQVQTEKTTADAAIDAAHTNAEVEAAKKAAIAKIEAIQPATTTK
                     DNAKEAIATKANERKTAIAQTQDITAEEIAAANADVDNAVTQANSNIEAANSQNDVDQ
                     AKTTGENSIDQVTPTVNKKATARNEITAILNNKLQEIQATPDATDEEKQAADAEANTE
                     NGKANQAISAATTNAQVDEAKANAEAAINAVTPKVVKKQAAKDEIDQLQATQTNVINN
                     DQNATTEEKEAAIQQLATAVTDAKNNITAATDDNGVDQAKDAGKNSIQSTQPATAVKS
                     NAKNDVDQAVTTQNQAIDNTTGATTEEKNAAKDLVLKAKEKAYQDILNAQTTNDVTQI
                     KDQAVADIQGITADTTIKDVAKDELATKANEQKALIAQTADATTEEKEQANQQVDAQL
                     TQGNQNIENAQSIDDVNTAKDNAIQAIDPIQASTDVKTNARAELLTEMQNKITEILNN
                     NETTNEEKGNDIGPVRAAYEEGLNNINAATTTGDVTTAKDTAVQKVQQLHANPVKKPA
                     GKKELDQAAADKKTQIEQTPNASQQEINDAKQEVDTELNQAKTNVDQSSTNEYVDNAV
                     KEGKAKINAVKTFSEYKKDALAKIEDAYNAKVNEADNSNASTSSEIAEAKQKLAELKQ
                     TADQNVNQATSKDDIEVQIHNDLDNINDYTIPTGKKESATTDLYAYADQKKNNISADT
                     NATQDEKQQAIKQVDQNVQTALESINNGVDNGDVDDALTQGKAAIDAIQVDATVKPKA
                     NQAIEVKAEDTKESIDQSDQLTAEEKTEALAMIKQITDQAKQGITDATTTAEVEKAKA
                     QGLEAFDNIQIDSTEKQKAIEELETALDQIEAGVNVNADATTEEKEAFTNALEDILSK
                     ATEDISDQTTNAEIATVKNSALEQLKAQRINPEVKKNALEAIREVVNKQIEIIKNADA
                     DASAKEIARTDLGRYFDRFADKLDKTQTNAEVAELQNVTIPAIEAIVPQNDPDANDTN
                     NGIDNNDATANSNANATPENTGQPNVSETTANGKADASPTTPNNSDAATGETTATSAT
                     DDANDKPQANNNSSVDASTNSPTMDNDVTSKPEVESTNNGTTDKPVTETDNATPAEST
                     TNNNSTTTATKENAPTGSTATAPTTASTEAASSADSKDNASVNDSKQNAEVNNSAESQ
                     STNDKVAQPKSENKAKAEKDGSDSTNQSMVESTTETLPSADITEPNVPSNTSKDKEES
                     TTNQTDAGQLKSETNVASNEADKSPSKADTEVSNKPSTSASSEAKEKMTSTNVSQKDD
                     TATADTNDTQKSVGSAANNKATQNDGANASPATVSNGSNSANQDMLNVTNTDDHQAKT
                     KSAQQGKVNKAKQQAKTLPDTGMSHNDDLPYAELALGAGMAFLIRRFTKKDQQTEE"
BASE COUNT         5173 a         3161 c         3032 g         6850 t
ORIGIN      
        1 acaaattacg tgatgccctc tacaacacta aatcaaggat gatatttatt ttatatacat
       61 tagcattcat tgtttgctta cccacattat cctgtttagt cttttttata actctagtct
      121 tgaatgtcat atttacaaag aaaaaaacac taaaatattt aaaactaaca ctatttattc
      181 actttgttct tttatagcac cttttatgtt tattttcttg tattcaataa atagtatgga
      241 gatgataatt taaagtagat atatttgaag tatactatag agtaaattat attggggaaa
      301 tatgtaaacg aaccggttga ttttatagtg gattaacact tcatagagaa tataatcaag
      361 aacaaaaaca gtcaataggt gtgaattttt ttaaagacgg atctgttgct actaaaaaaa
      421 gaagtataca attcaatagt taaaccttaa aacaagaaat attattcaaa atcaatgaat
      481 ttcctatctt attagtttta acaatattta ttctcataga gtttgtccaa ttaaatatag
      541 atgattcaaa tatttataag catacaaaag agcagtaaga cattttctaa tagaaaataa
      601 ctttactgct ctttgtacat tactcatcaa ctattgtaaa ttaaataata aataactacc
      661 tattttatta ttcagctaaa aaatgctctg ctaaatattt tgctgcgcca tcctcttcat
      721 tcgtgtatgc cgttacatct gaagttaatg cttggatttc agggcgtgca tttttcatag
      781 caactgtata atgaccaaat tcaaacattg ctctatcatt gtcgctatct ccaataacta
      841 acgtttcttc ttgatgaata ccaaaatgtg caatcatttc tttaatgcct gtacctttat
      901 cagtttgata agccattgtt tccgcattaa atcttgatga atttgaaaca ctaatctgta
      961 gttgcacatg attttgcttt aattcatctc taaatgctgt tattttttct aaattagaac
     1021 tgaatagata aatttttgaa tattcacctt caggaaactt agttacccaa tctatcttac
     1081 cagcaagcgc atcttgtctt gaagaccatt cactatgact tacgccatta ataggatctt
     1141 gactacgaat catatctcgc atccatgttt catcttcttt taaagaaact ctattacctt
     1201 caaaaggaaa tacctcataa taaatttgtt ggcgcttagc taaattagta atttgttgca
     1261 cttgagccaa tgataaacca tgcttgaaga taatttctcc atctacttct ccaattgttc
     1321 catttgaact aatgatgcca ttaaccgcaa aatcttgagg tacaagttga tgtatttcag
     1381 aatgcgaacg tcctgttgcc aaaaatactt tatatccttt ctctctcaat tgattaatga
     1441 catctttcgt atacgttgat gcttgattat tttcatgtaa aattgttcca tccatgtcca
     1501 aaaatattgc ttttacgtta tccatattgc cctccactgt ccattttatc ttaattaaat
     1561 tttgtcatta ttacttatta tttgcaaaat atttactcta acattgccat agaaaatcga
     1621 ttattccatc tttgaactgc tacatttttc tggaaaaatc gtgacatgtt ttcagaagtt
     1681 aatatgtctt ctacagcgcc ttgttgaata ctttggccat cttttagcag taaaattttg
     1741 gaaaagttag cagttatttc ttcaataaag tgcgtcacat aaatcatcgc aagcgttgga
     1801 tatgaatctg acaatgagtc aagtatactt aacaacgatt ctcgtgcaat aaagtctaaa
     1861 ccagctgctg gctcatctaa aattaaaacc tggggttgcc ccattaaagc tcgtgcaatc
     1921 atcactcgtt gtttttcacc ggtagataaa taaccaatat attgttgcgc tttagcagac
     1981 attccaacta atttaagtaa ttgatgtgct tcattacgta tctcatcatc aatatcttga
     2041 taaacaccaa ttgatttaaa ggcaccgctt atcaccacat cgattactct ttcaccctct
     2101 tgaaactttt ccagtaaact atgagataca aaacctatat gttgtcgtac agtctctgca
     2161 gaatacccta ccttgcctgg cattttaccg aaaaggttaa cagttccaga tgttgcaggc
     2221 tcatacgcat ttaaaatatt tagaagtgtt gtcttgccag caccattcaa cccatataat
     2281 atccatttat cacctttagc aatttgccaa gaaatctttt ttaaaattgt ttttccttgc
     2341 ttcattcgcc caatttgatc taattgaatt aacatgcgag gtcacccctt tattgctact
     2401 ccatacttct cataaaatca tattaacata acacccttaa ttgtcagact atttaaataa
     2461 ataaaacact tcatttttac gcatttctgc caaattaaga tgaagtaaaa gctaagtcga
     2521 cctaaaaaag cacccttcta gtcgattaat ctaaaagggt gccatatact ttaattttaa
     2581 tacatgattg attctaaaaa agtgaattat tccacagtaa ctgatttagc aaggttacgt
     2641 ggtttatcaa catctaaatc tctgtgtaat gctgcatagt atgaaattaa ttgtaatgca
     2701 accactgata ctaatggcgt taacaattca tgtacatgag gaatgacata agtgtcgcct
     2761 tctttttcaa gaccctccat agaaataata catggatgtg caccacgtgc tactacctct
     2821 ttaacgttac cacgaattga taaattaact ttctcttgtg ttgctaaacc tacaactggt
     2881 gtaccttctt cgattaaggc aattgtacca tgtttaagtt ctccaccagc aaaaccttct
     2941 gcttgaatgt aagaaatttc tttaagtttt aacgcacctt ctaaacttac gttatagtca
     3001 atagtacgtc cgataaagaa tgcattgcgt gttgtttcta agaaatctgt agcaatttgt
     3061 tccataattg gtgcatcgtc aacaattgct tctattgctg ttgttacttt tgctaattct
     3121 ctcaataaat caatatctgc ttcacgacca tgctcttttg caacgatttg agacaagatt
     3181 gataatactg caatttgtgc agtatatgct tttgtagatg caactgcgat ttcaggaccc
     3241 gcgtgtaata acaatgtgtg gtctgcttca cgtgataaag ttgaacctgc aacattagtg
     3301 attgttaatg atttatgacc taatttatta gtttcaacta atacggcgcg gctatctgca
     3361 gtttcacctg attgagaaat ataaacgaac aatggttttt cagataataa tggcatgttg
     3421 tagacaaact ctgatgcaac gtgtacttca gttggtacgc cagcccattt ttctaaaaat
     3481 tctttaccta ctaaacctgc atggtagctt gtacctgctg caataacgta aatgcggtct
     3541 gcttctttaa catcattgat gatgtcttga tcaattttca agttaccttc tgcatcttga
     3601 tattcttgaa taatacgacg cattactgct ggttgttcat gaatttcttt taacatgtag
     3661 tgtgcataaa cacctttttc agcatctgat gcatcaattt cagcaatata tgaatcacgt
     3721 tctacaacgt ttccatctgc atctttaata ataacttcat cttttttaac aataacgatt
     3781 tcatggtcat ggatttcttt atattcgctt gtcacttgta acattgcaag tgcgtctgat
     3841 gcgataacat tgaaaccttc accaacacct aataataatg gtgatttatt tttagcaaca
     3901 tagattgtgt ctttgtcttc agcatctaat aaacctaatg catatgaacc atgtaataat
     3961 gacacaactt ttgtaaatgc ttcttcagtt gaaagtcctt gatttgaaaa gtattcaact
     4021 aattgaacga taacttctgt atctgtttct gaaatgaatg atacaccttg taagtattca
     4081 ccttttaact cttcatagtt ttcaataaca ccgttatgaa ctagagtaaa acggccattt
     4141 gatgattgat gtggatgaga gttttcatga ttcggtacac cgtgtgttgc ccaacgtgtg
     4201 tgaccgattc caacaggtcc atcaaaatcg ctactatcag caactttacg taattctgca
     4261 atacgacctt tttctttaaa tacagttgta ttatcatcat ttactactgc gatacctgca
     4321 gagtcataac ctctgtattc taatttttct aaacctttta ataataattc tttggcatta
     4381 tcatagccaa tataaccaac aattccacac ataacgacat tttcctccat attggaatag
     4441 tacgcgtaaa ttatgattta ttgccgataa tttagattga caatctgctt tcataatata
     4501 aataggaaca tgctatcatc gcattcatcc ataacaaatt aagcatagtt atttttacaa
     4561 ctatacaaat tgctcacact gtactttcca tattaatatt ttttatattc aatttctggc
     4621 gatcttatta actttgtcca ttaagtcacc ctaatgtttt acttaataag ctaacgaatg
     4681 agccacatcc gggatagcat ccgccgatct attcgatcac tatcctcctc gtctacaaat
     4741 acatatattg cactctataa aggccactca tatattaacc tttaatcttc aaatacaaat
     4801 atttatttgc acaggcgctt taactgtact gccgaacttt ccccctttcc attaatcatt
     4861 attgtacaac ggtgttgttt tgttttgcaa atattttcac aataaaattt taaaaatcct
     4921 aaaacaattt ttttgtttta ctttttcaaa atatctatac tgtcacattg atgacacttt
     4981 atttaatttt gtcacattta ttttgacaaa gttgattttt gtttatattg agtaacaagt
     5041 aacctctcta tacactatat atagtcacat atattaaaaa agaggtgtaa acatgtcaca
     5101 aactgaagag aaaaaaggaa ttggtcgtcg tgttcaagca tttggatcat tcttaagtag
     5161 tatgatcatg ccaaacattg gcgctttcat cgcttggggt tttatcgcgg ccatttttat
     5221 agataatgga tggttaccta acaaagattt agctacttta gcaggaccaa tgattactta
     5281 tttaatccca ttattgatcg catttagtgg tggtcgttta atttatgatt tacgtggtgg
     5341 tatcatcgca gcaacagcaa ctatgggggt catcgttgca ttacctgata caccaatgtt
     5401 acttggtgca atgattatgg gtccacttgt tggttggtta atgaagaaga ccgaccaatt
     5461 gattcaacct agaacgccgc aaggttttga aatgttattt aataactttt ctgctggtat
     5521 tttaggattt atcatgacga ttgcaggatt taaaatttta gcaccactta tgaaatttat
     5581 tatgcatatt ttatcagtgg cagttgaagc attagtacat gcacacctac ttccacttgt
     5641 aagtatttta gtagagcctg caaaaattgt atttttaaac aatgcgatta accatggtgt
     5701 attcacaccg cttggtgcag atcaagctgc aaaagctggt caatcaattt tatacacaat
     5761 tgaatctaac cctggaccag gtttaggtat cttacttgct tatatgattt ttggaaaagg
     5821 cactgcaaaa gcaacgtcat atggtgctgg aattatccac ttcttaggtg gtattcatga
     5881 aatttatttc ccatatgtat taatgcgtcc tttattattt atcgctgtta ttttaggtgg
     5941 aatgactggt gttgcaactt atcaagcaac aggatttgga tttaaaagtc ccgcgtcacc
     6001 aggttcattt atagtttact gtttaaatgc acctagaggt gaattcttgc acatgttact
     6061 cggtgtcttc cttgctgcac ttgtatcatt cgttgtagct gctttaatta tgaagttcac
     6121 tagagaacca aagcaggatt tagaagctgc gacagctcaa atggaaaata ctaaagggaa
     6181 aaaatcaagc gttgcttcta agttagtatc ttctgataaa aatgttaata cagaagaaaa
     6241 tgctagtggt aatgttagtg aaacatcttc atcagatgat gatcctgaag cgctattgga
     6301 taattacaac actgaagatg ttgatgcaca caattacaat aatataaatc atgttatttt
     6361 tgcctgcgat gcgggtatgg gttctagtgc aatgggtgca agcatgttac gtaataaatt
     6421 taaaaaggcg ggcattaatg atattacagt tacaaatact gcgattaatc aattgccaaa
     6481 agatgctcaa ttagttatca ctcagaaaaa actaactgat cgtgctatta aacaaacacc
     6541 aaatgccatc catatttcag tggataattt ccttaattca ccaagatatg aagaactttt
     6601 aaataatcta aaaaaagatg atcaagcata ataattaaat aaattaaaaa atggaggata
     6661 ccgccatgtt attgagtaca cgtgaaaaag aaatgatagc cctattgatt aagtaccacg
     6721 gtcaatatat cactatacac gacattgctc agcaacttgc ggtgtcctct cgtactattc
     6781 accgtgaatt aaaaggtgtt gaagcatatt taacttcatt ttcattaact ttagaacgcg
     6841 caaacaaaaa agggctacgc attgctggca cagattctga tttaaacgat ttgaagcaat
     6901 cgattgcaca acatcaaacc attgacttat ctgttgaaga gcagaaagta attattatat
     6961 acgctttgat acaagccaag gagccagtta aacaatatag tttagcgcaa gaaattggcg
     7021 tttctgtcca gactttagca aagatgttag atgatttaga gcttgattta aataagtacc
     7081 aactatcttt atctcgaaag cgtggcgaag gcatttactt ggtaggtact gaatcaaaga
     7141 aacgtgaatt tttaagtcaa ttaatggtga ataacttaaa tagtactagc gtttattcag
     7201 taattgaaaa tcattttgtc tttcattcat taaatcaaat ccacaaagac tttgttgact
     7261 tagagcgcat ttttaatgtt gaaagactat taatggacta cctaagtgcc ttaccctacc
     7321 aacttaccga atcaagttat ttaactttaa ctgtccatat cgtgctctcc atttcacgta
     7381 taaaaaatgg agagtatgtc gcattaaacg atgatattta tgattctgta caaaacacat
     7441 ttgaacacaa agtagcaagc gaacttgctg ataaacttgg tcaaatatat gacgtcacgt
     7501 ttaatcaggc agaaattgct ttcattacta tccatttacg tggagctaaa cgaaaaaatc
     7561 ttaatgatac atcattaaat aatcgttgtg aagaaaacaa aattaaagcg tttgttaaca
     7621 aagtagaaat gatttccggt atgacatttg cagatttgga tactttagta gatggactga
     7681 cgctacacct taatcctgca atcaatcgtt tgcaagctaa tatcgagacc tataatccgt
     7741 taacagacat gattaagttc aaatatccaa gactatttga aaatgtaaga ttagctttaa
     7801 atgattgttg gcctgatttg atttttccag agagtgaaat tgcttttata gttttacact
     7861 ttggtggctc gattaaaaac caaggtaatc gatttttaaa catattagtc gtttgcagca
     7921 gtggtatggg aactagtcgt ctattatcaa ctcgtctaga gcaagttttt agtgagattg
     7981 agcgtattac acaagcatca gtcagcgatt tgaagtcact agatttaagt caatatgatg
     8041 gcattatttc tactgtgaat ttagacatcg actcccccta tttaacggta aacccattat
     8101 taccagatag tgatatcagt tatgtcgcac agtttttaaa tacaaagtct acgttccaag
     8161 agacgcatga taaatcatca aacatgattg ataaggatga tgttcatgtt gaaacgaaag
     8221 atgttgatgg caacacatct tttgaaaatg aacaaacttc atacttaact tcagttttcg
     8281 aaaaacattt aagtgacgaa aaatcagaac aattattgca tcatatgcgt tcgggtttaa
     8341 ctttgcttga ttcagtgaaa atagttagta ccgaagttaa acagtggcaa acatatatcg
     8401 cagattatct atatcaatgc gatgtaataa acgatccaac gtcattcgct gaactactag
     8461 agcaacgatt gattgacaat ccaggatgga tattaagtcc atatcctgtt gcaataccac
     8521 acctaagaga caatatgatt aaacacccta tgattctaat cacagtttta gaagaaccgt
     8581 taacattgcc tagtattcaa aatgacaatc aaacaattaa atatatgatt tccatgttta
     8641 tttctgacaa tgattttatg gcatcactgg taagtgactt gtccgaattt ttaagtttga
     8701 aattagaatc tattgatact tttatggaaa atccacagga acttgaaaca ttattaagaa
     8761 acaaattttt agaacgaatt aaaaaacaat ttatttagga gtgtacaaaa tgagcgaatt
     8821 atttagtaat gacaatatct ttttaaatgt aaatgttaac agccaaaatg aagcaattga
     8881 aaaagcaggt aaagccttag ttgatagtgg tgctgtaaca gatgcttata ttcaagcaat
     8941 gaaagatcgt gagcaagtcg tatcaacatt tatgggaaat ggcttagcaa ttcctcatgg
     9001 cacagatgaa gctaaaacaa atgtgattca ctcaggttta acattattac aaatccctga
     9061 aggcgttgac tgggatggcg aagtagttaa agttgtcgtg ggaattgctg gtaaagatgg
     9121 cgaacattta gacttgttat ctaaaattgc aattacattt agcgaagaag aaaatgtgga
     9181 tcgtatcgtt caagcaaaat ctgcagaaga aattaaacaa gtattcgagg aggcagatgc
     9241 ataatgaaag cagttcactt tggtgctggt aacataggtc gtggtttcat tggttatatt
     9301 cttgcagaca acaatgttaa agtaacattt gcagacgtca atgaagaaat cattaatgct
     9361 ttagctcatg atcatcaata cgatgttatt ttagctgatg agtctaaaac aacgacgcgc
     9421 gtgaataatg ttgatgcaat taattcaatg caaccttctg aagcgttgaa acaagcaatt
     9481 ctagaagctg atattattac aacagctgtt ggtgttaaca tactacctat tattgctaaa
     9541 tcttttgcgc ctttcttaaa agaaaaaaca aaccatgtta atattgttgc ttgtgagaat
     9601 gctattatgg caactgatac attgaaaaaa gcagtacttg atattactgg ccctcttggt
     9661 aacaatattc attttgctaa ctcagcagtt gatagaattg taccattaca aaagaatgaa
     9721 aatatattag acgttatggt tgagccattt tacgaatggg ttgttgaaaa agatgcatgg
     9781 tatggtccag aactaaacca tattaaatat gttgatgatt taacaccata tattgagcgt
     9841 aaattattaa ctgtgaatac aggacatgca tatttagcgt atgctggtaa atttgcaggt
     9901 aaagctacag ttttagatgc agttgaagat agttcaattg aagctggctt acgccgtgtt
     9961 ttagctgaaa ctagtcaata tattactaat gaatttgatt ttactgaagc ggaacaagct
    10021 ggttatgttg aaaaaataat agatcgtttc aacaattctt atttatctga tgaagtaaca
    10081 cgtgtcggac gaggtacatt acgtaaaatt ggccctaaag atagaattat aaaaccatta
    10141 acatatcttt ataataaaga tttagaacgc actggtttat taaatacagc tgcattgtta
    10201 ttgaagtatg atgatacagc agaccaagaa actgttgaga aaaataatta cattaaagaa
    10261 cacggtttaa aagcgttttt aagtgaatat gctaaagttg acgatggctt agccgatgaa
    10321 ataattgaag cgtacaattc actttcataa tttattgagc tttgtttgaa acaagaagtt
    10381 tccaacgtta ttcgttaaca atcagtaata atgtagtagt tcccttgaat taacaatatt
    10441 aaatttctga acataaaaaa tactcccttc aacatagaca cttaacttgt gttatgtatg
    10501 aaaggagtat ttttgcgtta ataatttgtt ttattttcga gccacagcca cctattcaat
    10561 ggctattggt cattactaaa acaaattcat attaactgtt agacttggtt acttagtaag
    10621 gaatatttcc ctatgaaata actagatgtt cacattcttg aataaatttt attcttcagt
    10681 ttgttggtct ttcttagtga atcttctaat taagaatgcc atacctgcac ctagagctaa
    10741 ttcagcatat ggtaaatcgt cattatgtga cataccagta tctggtaaag ttttagcttg
    10801 ttgtttagct ttattaactt ttccttgttg agctgatttt gtcttagctt ggtggtcgtc
    10861 agtgttagtt acattaagca tatcttgatt agcactattg cttccatttg aaactgtagc
    10921 tggagatgca ttggcaccgt cgttttgcgt agctttattg tttgcagctg aaccaactga
    10981 tttttgcgta tcattagtat ctgctgttgc cgtatcatct ttttggctaa cattagttga
    11041 agtcattttt tcttttgctt cagaagatgc agatgttgat ggtttattcg aaacttcagt
    11101 atcagctttg cttggcgatt tatctgcttc gttagatgca acgttagttt cagacttaag
    11161 ttgtcctgca tcagtttgat ttgtcgtact ttcttcttta tcttttgatg tattagaagg
    11221 tacatttggt tctgttatgt ctgctgaagg caatgtttca gttgttgatt caaccatact
    11281 ttgatttgtt gaatcactac catctttttc tgccttagct ttattttcag attttggttg
    11341 tgcaaccttg tcattagttg attgagattc agcactatta tttacttcag cattttgttt
    11401 tgaatcattt acagatgcat tatctttgct atcagcagat gatgctgctt ctgtgctcgc
    11461 agttgttgga gccgttgctg ttgatcctgt tggtgcattc tcttttgttg ctgtagttgt
    11521 actattgtta tttgttgtgc tttctgctgg cgttgcatta tcagtttctg ttacaggttt
    11581 atcagttgtg ccgttattag ttgattctac ttctggttta ctagttacat cgttatccat
    11641 tgtcggactg tttgttgatg catctacact agaattgtta ttagcttgcg gtttatcatt
    11701 tgcatcatca gttgctgatg ttgctgttgt ttcacctgtt gccgcatcac tattatttgg
    11761 tgttgtcgga gaagcgtctg ctttgccatt agctgtcgtc tcagatacgt taggttgtcc
    11821 agtattttct ggtgttgcat tagcatttga atttgctgtt gcatcattat tatctatacc
    11881 attattagta tcattagcat ctggatcatt ctgaggcaca atcgcttcaa ttgcaggtat
    11941 cgttacattt tgtaattcag caacttctgc atttgtttgt gttttatcta atttatcagc
    12001 aaatctgtca aaatatctac ctaaatccgt acgtgcaatt tctttcgccg atgcatctgc
    12061 atctgcattt ttaattattt ctatttgctt gttaaccact tctctgattg cttccaaagc
    12121 atttttctta acttcaggat taatacgttg tgctttaagt tgttcaagcg cactattttt
    12181 gacagtagcg atttctgcat ttgtagtttg atcagaaata tcttcagttg cttttgataa
    12241 aatgtcttct aaagcattcg taaacgcttc tttttcttca gttgtagcat cagcgttgac
    12301 atttacacct gcttcaatct ggtctagtgc agtttctaat tcttcgatag ctttttgttt
    12361 ttctgttgag tcgatttgaa tgttatcaaa tgcttcaagt ccttgagctt tcgctttttc
    12421 aacttcagca gttgttgttg catcagtaat accttgttta gcttgatctg taatttgttt
    12481 aatcattgct aatgcttcag ttttttcttc agcagttaac tggtcacttt gatcaataga
    12541 ttctttcgta tcttctgctt taacttcaat agcttggttc gctttaggtt taacagtagc
    12601 atctacttga atagcatcaa ttgctgcttt accttgtgtt aatgcatcat caacgtcacc
    12661 attatccaca ccattattaa tgctttctaa tgcagtttga acattttggt caacttgctt
    12721 aattgcttgt tgcttttcat cttgtgttgc attagtgtca gctgaaatat tatttttctt
    12781 ctgatctgca taagcatata aatctgttgt agctgattct tttttacctg ttggaattgt
    12841 gtaatcgtta atattatcta agtcattatg aatttgaact tcaatgtcat ctttagaagt
    12901 agcttgatta acattttgat ccgcagtttg ttttaattca gcaagttttt gtttcgcttc
    12961 agcaatttca cttgaagtcg atgcgttaga gttatccgct tcgtttactt tagcattata
    13021 tgcatcttca attttagcta aagcatcttt tttgtactca ctaaatgttt taactgcatt
    13081 aattttagct tttccttctt taactgcatt atcaacatat tcatttgttg atgattgatc
    13141 gacatttgtt ttcgcttgat ttaattcagt atcaacttct tgttttgcat cattaatttc
    13201 ttgttgtgat gcatttggtg tttgttctat ttgtgttttc ttatcagctg cagcttgatc
    13261 taattctttt ttacctgctg gtttcttaac aggatttgca tgaagttgtt gaactttttg
    13321 tactgctgta tctttagcag tagttacatc acctgtagta gttgctgcat taatattatt
    13381 taaaccttct tcatatgctg ctctaactgg tccaatatcg ttaccttttt cttcattagt
    13441 agtctcatta ttattaagta tttcagttat tttattttgc atttcagtta gcaattccgc
    13501 tcttgcattc gttttaacat ctgttgatgc ttgaattggg tcaattgctt gaattgcatt
    13561 atcttttgca gtgtttacat catcgattga ctgtgcattt tcaatatttt gattaccttg
    13621 tgttaattgt gcgtctactt gttgatttgc ttgttctttt tcttcagtag tcgcatctgc
    13681 agtttgtgca ataagcgctt tttgttcgtt tgcttttgtt gctaattcat ctttcgcaac
    13741 atctttaatt gttgtatctg cagtaatacc ttgaatatca gcaactgctt gatctttaat
    13801 ttgcgtaaca tcattagttg tttgtgcatt taagatatct tgatacgctt tttctttagc
    13861 ttttaaaact aaatcttttg ctgcattttt ctcttcagtt gtagcaccag ttgtattatc
    13921 aattgcttga ttttgagttg tcacagcttg atcaacatca tttttagcat ttgatttaac
    13981 cgctgttgct ggttgcgtgc tttgaattga attctttcca gcgtctttcg cctgatctac
    14041 accattatca tcagttgcag ctgtaatatt atttttcgcg tctgtaactg ctgttgctaa
    14101 ttgttgaata gctgcttctt tttcttctgt tgtagcgttc tgatcattat tgataacatt
    14161 tgtttgcgtt gcttgtaatt gatcaatttc atctttagcc gcttgtttct tcacaacttt
    14221 tggtgttacc gcattaatcg ctgcttctgc atttgcttta gcttcatcaa cttgtgcgtt
    14281 agtagttgct gctgaaatgg cttgatttgc tttaccattt tcagtatttg cttcagcatc
    14341 agctgcttgt ttttcttcat ctgttgcatc tggcgtagct tgaatctctt gcaatttgtt
    14401 atttaaaatt gctgtgattt cattacgtgc agttgctttt ttattaactg ttggtgttac
    14461 ttgatcaata ctattttcac ctgtcgtttt cgcttggtct acatcatttt gactattagc
    14521 agcttcaatg ttgctatttg cttgtgtcac agcattatct acgtccgcat tagccgctgc
    14581 aatttcttca gcagtaatgt cttgcgtttg agcgattgct gttttacgtt cattcgcttt
    14641 cgtagcaatt gcttctttcg cattatcttt agttgttgtt gctggctgaa tcgcttcaat
    14701 tttagcaatt gctgcttttt tagccgcttc aacttccgca tttgtatgtg ctgcatctat
    14761 tgcggcatca gctgttgttt tttcagtttg aacttgttgt ttagcagctg ctttttcttc
    14821 agttgttgag ccgttatttc catcaattgc tgtttcttga gcttgtactt tatctgcaat
    14881 tgcttgtttt gctgctggtt taacatttgc atcaggtgta atggctgcga ttgtagcttc
    14941 atttgtagtt tttgcattat ccacatcatt gtttgctgca gcattatcta tatcagcgtt
    15001 tgcagtaact actgcttgat ccactttgtc tttcgctgct tgttgttctt cagtagtcga
    15061 atcattcatt gcttcaattg ctgttttacg ttcacttgct ttttgagcga tttccgcttt
    15121 tgcatccgat ttcttagttg tggcagcttg aacttgatta attgcagcaa tactattgtc
    15181 tttagctgtt gttacatcac tgtttgtatt tgcagcatca agatttgttc ttgcttcttg
    15241 ctttttagta tctaattctg tatatgcagc ttgtttttct tctgtagttg aagcattgct
    15301 attttgaatt tcttgtttac gtgtattata tgcgttttct acttccgtat cagctgcagg
    15361 tttaactttt acttgtgttt gaattgcatt gattttatct aatacttttg attttgtatc
    15421 agcaacttcc tgttttgatt taacaacttg gatgtcatgt aaaccttgct tttgagctgc
    15481 atctactgct gcatcagctt ctgctacttc ttcatttgtt gcatttgaaa ctgtagcatt
    15541 ttgagctttt ctagctgttg cagcttgttt aacttcatta taggcatcca tttctgtttg
    15601 cgtagagtca gtaatatttt caatttttga gatttcttcg tttttaactc tttctaaatc
    15661 ttgtgcagtc gttgtcgctt caattgcttt aacaccagaa actttagctg cattaatacg
    15721 ttcaatagct tccgctactt cttcatttgt tgtatcagga tttaaaggtg cttgatcaat
    15781 ttgtgcttga acaacttcgt caaattcttc aagagctgct gctttagctg ttgtagcagg
    15841 tgtagtttga ttaatatcat tgattgcttt tgttttaatg gcttctactt gtgcatttgt
    15901 tgttgctgca tcaatatctt taattgcctt tgtttcaatt ttaccaattt tatcatttgc
    15961 tacatctttt tcatcttgta atgatgcatt tgacttttta atttgttgtt tacgagttgt
    16021 aactgcttgg ataatatctt gtttcgcttg aggtttaact gttggtgtaa tcacatcttg
    16081 ttctaacact gcgataccat tatctttttc agttgtgaca ccttgtgctg tagtttgttt
    16141 attaatttct gcgattgcat tatttttatc attgttaatt ttagttacaa gtgctgcaac
    16201 ttcatcttgc gtaacttttt tactttgttg tgctgctgta accttttctt gagctttagt
    16261 atctaattca gcaattgctg cttgattatc aattaatgca gcttgtaatt tagttactaa
    16321 accatcaata tccgcttgag atgcacgatt tgcagtttta acatgattcg catcttcatt
    16381 taaaatagta tctgcttgtt gtttaagttt attgtattct gcaattgatg ctgttgtgta
    16441 atgactatta tcaacttgtg agtttacttg ttgttgcaac gcatctttgt tcatttcaac
    16501 cgctactgaa aatggatctg cagttagtgt aacttctggt tgcgcattat taattacaac
    16561 atctgaagca gtacgatatg ttaatttttc attaaaatca atatttttag gtgtatcgat
    16621 attcgcaaca ttaactttat atgataattt taaagattta tctgggaata aaacttcttt
    16681 agtgtgtgta ccacgtgccg ttgtcacacc ttggcttgta aatgtaactt tatttgcatt
    16741 ttgatcataa ttaacagtca tatttttcaa tactgtactg tcttcattac cattagggaa
    16801 tgttgtagtt aatgaattat taacgtaagt tacaccttgt ggtaatgtta cttcatattt
    16861 aaattgatct gcttttaatg aagcaccaaa attaccattg ttaccgattt cagtattaat
    16921 agtatattct ttattgttag ttgctttcgg tgctaaatct ctatttttga catataaatg
    16981 tgatcctgag aatagaccta cattatcaat gaatgaatag tatttataac catctttatt
    17041 tgttgtaatt cttgaagcat cagcaactgc tgtattgtca ggaataaatt gtaaatctaa
    17101 acgatcagca tcagttggta ctttaaataa atgtgcagta ccagtcttag caacatttac
    17161 agttgctaat tcagtatttt tcttagcatc tttaataact aaatttgttg caccttgctt
    17221 actattcgtt tgcatagtag taaagttaat aattaattct gaatctggtt ttacatttac
    17281 agtttttgaa ataccgttaa agttaccatg atctgtagaa tcatttgcat tcacacgacc
    17341 taatgcagcc acgtttcctt tagcttgata gttttgaggg ttattcttat caaacatatc
    17401 gcttcgtctt aattctgagt taacgaaacc aatcttaccg ttgttaatta atgaataacc
    17461 atttacttta tctgtaacag ttacagttgg atcctgtcta ttctcatctg ttgatatggc
    17521 aggatcatca aatgttaatg tcgtattaat actgccttca ccagtattgc tagcatttgg
    17581 atcttgagtt tgtgcgtttg ctgctacagg tgctgctggt tgcgctgctg ctggagcatt
    17641 cgctggctgt gtttgatttg ccggtgttgc attattatta ggtgttgctt ggttatttcc
    17701 ttgacctgct tggtttgccg gtgttgcttg atttccaggt tgtgcttgtg cagcgttatt
    17761 cggatcagct tgattacctt gtccagctgg ttgtgtattt ggttgtgctg ctcctcctgc
    17821 tggattagcc tgtccacctt ggtttgctgg ttgtactgct ggttgtcctt ggttggcagg
    17881 tgcagctggc tgtgctgtag gattagcttg agcaccagca tttgcgttag gctgtgtatt
    17941 ggcatcagct ggttgtgctg gttgattttg tgcaggctga ttttgctctg ctgcagacgc
    18001 tgttgtcggg ttagtagata taaaagtaac agtggcaatt aaagctgaaa aaataccgac
    18061 attaaatttt ctgatactaa atttttgttg tctgaataaa ttcattaagt catcctcctg
    18121 gttgattatt ctcgctgtta aatgatttca cttaatcaac tgttaagata agtagtagca
    18181 tctgcgttaa aaacacaaaa caactctatc taatta
//
LOCUS       DALPQQ010000046        17940 bp    DNA     linear   BCT 22-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus strain K18-6-464
            SAMD00233528-rid16434743.denovo.046, whole genome shotgun sequence.
ACCESSION   DALPQQ010000046 DALPQQ010000000
VERSION     DALPQQ010000046.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMD00233528
            Sequence Read Archive: DRR236061
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 17940)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 17940)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001543423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001543423.1
            Genome Coverage       :: 77x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/22/2022 17:09:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,811
            CDSs (total)                      :: 2,743
            Genes (coding)                    :: 2,689
            CDSs (with protein)               :: 2,689
            Genes (RNA)                       :: 68
            rRNAs                             :: 2, 4, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 4, 2 (16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 54
            CDSs (without protein)            :: 54
            Pseudo Genes (ambiguous residues) :: 0 of 54
            Pseudo Genes (frameshifted)       :: 27 of 54
            Pseudo Genes (incomplete)         :: 27 of 54
            Pseudo Genes (internal stop)      :: 10 of 54
            Pseudo Genes (multiple problems)  :: 10 of 54
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..17940
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMD00233528-rid16434743.denovo.046"
                     /strain="K18-6-464"
                     /db_xref="taxon:1280"
                     /geo_loc_name="Japan: Niigata"
     gene            <1..99
                     /locus_tag="O7798_001288"
     CDS             <1..99
                     /locus_tag="O7798_001288"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499555.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDC2863554.1"
                     /translation="FNKEFAKSNLSLNNEKWKFVCSKSKHFFKKSS"
     gene            complement(247..564)
                     /locus_tag="O7798_001289"
     CDS             complement(247..564)
                     /locus_tag="O7798_001289"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499556.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF5011 domain-containing protein"
                     /protein_id="HDC2863555.1"
                     /translation="MNKLLQSLSALGVSATLVTPNLNADATTNTTPQIKGANDIVIKK
                     GQDYNLLNGISAFDKEDGDLTDKIKVDGQIDTSKSGKYQIKYHVTDSDGAIKISTRYI
                     EVK"
     gene            complement(1370..2230)
                     /gene="folD"
                     /locus_tag="O7798_001290"
     CDS             complement(1370..2230)
                     /gene="folD"
                     /locus_tag="O7798_001290"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499557.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional methylenetetrahydrofolate
                     dehydrogenase/methenyltetrahydrofolate cyclohydrolase
                     FolD"
                     /protein_id="HDC2863556.1"
                     /translation="MVAKILDGKQIAKDYRQGLQDQVEALKEKGFTPKLSVILVGNDG
                     ASQSYVRSKKKAAEKIGMISEIVHLEETATEEEVLNELNRLNNDDSVSGILVQVPLPK
                     QVSEQKILEAINPEKDVDGFHPINIGKLYIDEQTFVPCTPLGIMEILKHADIDLEGKN
                     AVVIGRSHIVGQPVSKLLLQKNASVTILHSRSKDMASYLKDADVIVSAVGKPGLVTKD
                     VVKEGAVIIDVGNTPDENGKLKGDVDYDAVKEIAGAITPVPGGVGPLTITMVLNNTLL
                     AEKMRRGIDS"
     gene            2431..2913
                     /gene="purE"
                     /locus_tag="O7798_001291"
     CDS             2431..2913
                     /gene="purE"
                     /locus_tag="O7798_001291"
                     /EC_number="4.1.1.21"
                     /EC_number="5.4.99.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002465404.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5-(carboxyamino)imidazole ribonucleotide mutase"
                     /protein_id="HDC2863557.1"
                     /translation="MKVAVIMGSSSDWKIMQESCNMLDYFEIPYEKQVVSAHRTPKMM
                     VQFASEARERGINIIIAGAGGAAHLPGMVASLTTLPVIGVPIETKSLKGIDSLLSIVQ
                     MPGGIPVATTAIGAAGAKNAGILAARMLSIQNPSLVEKLNQYESSLIQKVEDMQNELQ
                     "
     gene            2900..4024
                     /gene="purK"
                     /locus_tag="O7798_001292"
     CDS             2900..4024
                     /gene="purK"
                     /locus_tag="O7798_001292"
                     /EC_number="6.3.4.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499559.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5-(carboxyamino)imidazole ribonucleotide
                     synthase"
                     /protein_id="HDC2863558.1"
                     /translation="MNFNKLKFGATIGIIGGGQLGKMMAQSAQKMGYKVVVLDPSEDC
                     PCRYVAHEFIQAKYDDEKALNQLGQKCDVITYEFENISAQQLKLLCEKYNIPQGYQAI
                     QLLQDRLTEKETLKSAGTKVVPFISVKESTDIDKAIETLGYPFIVKTRFGGYDGKGQV
                     LINNEKDLQEGFKLIETSECVAEKYLNIKKEVSLTVTRGNNNQITFFPLQENEHRNQI
                     LFKTIVPARIDKTAEAKEQVNKIIQSIHFIGTFTVEFFIDSNNQLYVNEIAPRPHNSG
                     HYSIEACDYSQFDTHILAVTGQSLPNSIELLKPAVMMNLLGKDLDLLENEFNEHPEWH
                     LHIYGKSERKDSRKMGHMTVLTNDVNQTEQDMYAKFEGSN"
     gene            4028..4732
                     /locus_tag="O7798_001293"
     CDS             4028..4732
                     /locus_tag="O7798_001293"
                     /EC_number="6.3.2.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499560.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylaminoimidazolesuccinocarboxamide
                     synthase"
                     /protein_id="HDC2863559.1"
                     /translation="MTLLYEGKAKRIFSTNQENELRVEYKDEVTAGNGAKKDTMAGKG
                     RLNNQITSIIFKYLQENGIESHFIKQLSETEQLVKPVKIIPLEVVVRNIASGSITKRL
                     GFENGEVFREPLVEFFYKNDALNDPLITDDHVKLLNIASDEDIEILKSKALKINNVLK
                     QLMDAMNLKLVDFKIEFGKTETGQILLADEISPDTCRIWDKATNANFDKDVYRNNTGS
                     LIETYQIFLNKLEDLK"
     gene            4732..4995
                     /gene="purS"
                     /locus_tag="O7798_001294"
     CDS             4732..4995
                     /gene="purS"
                     /locus_tag="O7798_001294"
                     /EC_number="6.3.5.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499561.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylformylglycinamidine synthase
                     subunit PurS"
                     /protein_id="HDC2863560.1"
                     /translation="MKTIELHITLQPQVLDTQGQTLTRAVHDLGYAQVNDIRVGKVLY
                     MTVDEVSDEKVHNIITTLSEKLFANTVIEEYSYKVLDDEKENA"
     gene            4997..5668
                     /gene="purQ"
                     /locus_tag="O7798_001295"
     CDS             4997..5668
                     /gene="purQ"
                     /locus_tag="O7798_001295"
                     /EC_number="6.3.5.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499562.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylformylglycinamidine synthase I"
                     /protein_id="HDC2863561.1"
                     /translation="MKFAVLVFPGSNCDRDMFNAAIKSGVEAEYVDYRETSLSGFDGV
                     LIPGGFSFGDYLRSGAMASVAPIISEVKRLAAEGKPVLGVCNGFQILTEIGLLPGALL
                     HNDSHLFISRNEELEIVNNQTAFTNLYEQGEKVIYPVAHGEGHYYCTDEIYQQLKANN
                     QIILKYVNNPNGSYDDIAGIVNEKGNVCGMMPHPERALETLLGTDSGVKLFEAMVKSW
                     REQHV"
     gene            5661..7850
                     /gene="purL"
                     /locus_tag="O7798_001296"
     CDS             5661..7850
                     /gene="purL"
                     /locus_tag="O7798_001296"
                     /EC_number="6.3.5.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499563.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylformylglycinamidine synthase
                     subunit PurL"
                     /protein_id="HDC2863562.1"
                     /translation="MSKFIEPSVEEIKLEKVYQDMGLSDQEYEKVCDILGRQPNFTET
                     GIFSVMWSEHCSYKHSKPFLKQFPTSGDHVLMGPGEGAGVVDIGDNQAVVFKVESHNH
                     PSAIEPYQGAATGVGGIIRDIVSIGARPINLLNSLRFGELDNKQNQRLLKGVVKGIGG
                     YGNCIGIPTTAGEIEFDERYDGNPLVNAMCVGVINHDMIQKGTAKGVGNSVIYVGLKT
                     GRDGIHGATFASEELTEESESKRPSVQIGDPFVGKKLMEATLEAITFDELVGIQDMGA
                     AGLTSSSSEMAAKGGSGLHLRLEQVPTREPGISPYEMMLSETQERMLLVVEKGTEQKF
                     LDLFDKHELDSAVIGEVTDTNRFVLTYDDEVYADIPVEPLADEAPVYILEGEEKDYNT
                     SKNDYTHIDVKDTFFKLLKHPTIASKHYLYDQYDQQVGANTIIKPGLQASVVRVEGTN
                     KAIASTIDGEARYVYNNPYEGGKMVVAEAYRNLIAVGATPLAMTDCLNYGSPEKKEIY
                     QQLIDSTKGMAEACDILKTPVVSGNVSLYNETKGTSIFPTPVVGMVGLIENVNYLNDF
                     EPQVGDKLYLIGDTKDDFGGSQLEKLIYGKVNHEFESLDLSSEVEKGESIKTAIREGL
                     LSHVQTVGKGGLLITLAKLSAHYGLGLKSSIDITNAQLFSETQGRYVVSVKSSKTLNI
                     DNAIEIGLLTDSDNFKVTTPYTEISENVSDIKQIWEGAIAQCLTTQD"
     gene            7829..9313
                     /locus_tag="O7798_001297"
     CDS             7829..9313
                     /locus_tag="O7798_001297"
                     /EC_number="2.4.2.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499564.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amidophosphoribosyltransferase"
                     /protein_id="HDC2863563.1"
                     /translation="MFNYSGLNEECGVFGIWNHPEAAQLTYMGLHSLQHRGQEGAGIV
                     VSDQNELKGERGLGLLTEAIKDDQMERLKGYQHAIGHVRYATSGNKGIENIQPFLYHF
                     YDMSVGICHNGNLINAKSLRQNLEKQGAIFHSSSDTEVIMHLIRRSKAPTFEEALKES
                     LRKVKGGFTFAILTKDALYGAVDPNAIRPLVVGKMKDGTYILASETCAIDVLGAEFVQ
                     DIHAGEYVVINDKGITVKSYTHHTTTAISAMEYIYFARPDSTIAGKNVHAVRKASGKK
                     LAQESPVNADMVIGVPNSSLSAASGYAEEIGLPYEMGLVKNQYVARTFIQPTQELREQ
                     GVRVKLSAVKDIVDGKNIILVDDSIVRGTTIRRIVKMLKDSGANKVHVRIASPEFMFP
                     SFYGIDVSTTAELISASKSPEEIKDYIGADSLAYLSVDGLIESIGLDYDAPYSGLCVE
                     SFTGDYPAGLYDYEANYKAHLSHRQKQYISKNKHFFDSEGNLNV"
     gene            9306..10334
                     /locus_tag="O7798_001298"
     CDS             9306..10334
                     /locus_tag="O7798_001298"
                     /EC_number="6.3.3.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499565.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylformylglycinamidine cyclo-ligase"
                     /protein_id="HDC2863564.1"
                     /translation="MSKAYEQSGVNIHAGYEAVERMSSHVKRTMRKEVIGGLGGFGAT
                     FDLSQLNMTAPVLVSGTDGVGTKLKLAIDYGKHDSIGIDAVAMCVNDILTTGAEPLYF
                     LDYIATNKVVPEVIEQIVKGISDACVETNTALIGGETAEMGEMYHEGEYDVAGFAVGA
                     VEKDDYVDGSEVKEGQVVIGLASSGIHSNGYSLVRKLINESGIDLASNFDNRPFIDVF
                     LEPTKLYVKPVLALKKEVSIKAMNHITGGGFYENIPRALPAGYAARIDTTSFPTPKIF
                     DWLQQQGNIDTNEMYNIFNMGIGYTVIVDEKDVSRALKILAEQNVEAYQIGHIVKNES
                     TAIELLGV"
     gene            10337..10903
                     /gene="purN"
                     /locus_tag="O7798_001299"
     CDS             10337..10903
                     /gene="purN"
                     /locus_tag="O7798_001299"
                     /EC_number="2.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499566.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylglycinamide formyltransferase"
                     /protein_id="HDC2863565.1"
                     /translation="MVKIAIFASGSGSNFENIVEHVESGKLENIEVTALYTDHQNAFC
                     IDRAKKHDIPVYINEPKQFDSKAAYEQHLVTLLNEDKVEWIILAGYMRLIGPDLLASF
                     EGKILNIHPSLLPKYKGIDAIGQAYHSGDTITGSTVHYVDSGMDTGEIIEQRKCDIRP
                     DDSKEQLEEKVKKLEYELYPSVIAKIVK"
     gene            10918..12396
                     /gene="purH"
                     /locus_tag="O7798_001300"
     CDS             10918..12396
                     /gene="purH"
                     /locus_tag="O7798_001300"
                     /EC_number="2.1.2.3"
                     /EC_number="3.5.4.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499567.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional
                     phosphoribosylaminoimidazolecarboxamide
                     formyltransferase/IMP cyclohydrolase"
                     /protein_id="HDC2863566.1"
                     /translation="MKKAILSVSNKTGIVEFAKALTQLNYELYSTGGTKRILDEANVP
                     VRSVSDLTHFPEIMDGRVKTLHPAVHGGILADRNKPQHLNELSEQHIDLIDMVVVNLY
                     PFQQTVANPDVTMDEAIENIDIGGPTMLRAAAKNYKHVTTIVHPADYQEVLTRLRNDS
                     LDESYRQSLMIKVFEHTAEYDEAIVRFFKGDKETLRYGENPQQSAYFVRTSNAKHTIA
                     GAKQLHGKQLSYNNIKDADATLALVKKFDTPATVAVKHMNPCGVGIGDTIEQAFQHAY
                     EADSQSIFGGIVALNRAVTPELAEQLHSIFLEVIIAPKFTDEALDILKQKKNVRLLEI
                     DMTIDSNEEEFVSVSGGYLVQDKDNYVVPKEEMKVVTEVAPTDEQWEAMLLGWKVVPS
                     VKSNAIILSNNKQTVGIGAGQMNRVGAAKIALERAIEINDHVALVSDGFFPMGDTVEL
                     AAQHGIKAIIQPGGSIKDQDSIDMANKHGIAMVVTGTRHFKH"
     gene            12418..13665
                     /locus_tag="O7798_001301"
     CDS             12418..13665
                     /locus_tag="O7798_001301"
                     /EC_number="6.3.4.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499568.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylamine--glycine ligase"
                     /protein_id="HDC2863567.1"
                     /translation="MNVLVIGAGGREHALAYKLNQSNLVKQVFVIPGNEAMTPIAEVH
                     TEISESDHQAILDFAKRQNVDWVVIGPEQPLIDGLADILRANGFKVFGPNKQAAQIEG
                     SKLFAKKIMEKYNIPTADYKEVERKKDALTYIENCELPVVVKKDGLAAGKGVIIADTI
                     EAARSAIEIMYGDEEEGTVVFETFLEGEEFSLMTFVNGDLAVPFDCIAQDHKRAFDHD
                     EGPNTGGMGAYCPVPHISDDVLKLTNETIAQPIAKAMLNEGYQFFGVLYIGAILTKDG
                     PKVIEFNARFGDPEAQVLLSRMESDLMQHIIDLDEGKRTEFKWKNESIVGVMLASKGY
                     PDAYEKGHKVSGFDLNENYFVSGLKKQGDTFVTSGGRVILAIGKGDNVQDAQRDAYKK
                     VSQIQSDHLFYRHDIANKALQLK"
     gene            complement(13930..14736)
                     /locus_tag="O7798_001302"
     CDS             complement(13930..14736)
                     /locus_tag="O7798_001302"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499569.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="energy-coupling factor transporter transmembrane
                     protein EcfT"
                     /protein_id="HDC2863568.1"
                     /translation="MYEQWKVRQSFVDDVNIITKLFLGIILFFFIIFVHNFDFMLYIT
                     ILMLVFLLMFNGTQFKITAIFITISIGFALLSSLFMILYGNGSHTILKFGFIHITTES
                     LVRGLHVSLRTIAISFFGILIALTSQVVMIFYSLMQHLKVKSKVAYAFMAAIRMIPLM
                     ISSLIQLRRSLKMRYQMIDAANYRGLKRFKHLIIPLLSQNIRKAHQLSVAMESKGFRD
                     GPRTYYYNVPFSYKDIIFIIVLIAIITMAYYCSITLPITGIDDVRLGRVG"
     gene            complement(14729..16129)
                     /locus_tag="O7798_001303"
     CDS             complement(14729..16129)
                     /locus_tag="O7798_001303"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499570.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HDC2863569.1"
                     /translation="MLKVSDLRLKYPSGQRKIFDHLNITIQDKEKVLLLGPSGCGKST
                     LLNVLSGIVPNLIELPMKYDELIVAPLSGVIFQDPDSQFCMPKVYEELAFVLENRQLP
                     REDMDALIINALNMVNLNVTPETYIKDLSGGMKQKLAIVETILQQSKTLFLDEPTAML
                     DVQATEDLWTKLIELWEDQTVVIVEHKVKHIWNHVDRVILMDYNGNIIADECPEIILQ
                     KYVHLLSEYGVWHPRAWEFAPSRVDFPTTNSHLLQFKNGRIIRGKSTLLSFSDLEIGL
                     GEWITITGANGSGKTTLLESIMQLIKYQGDVYFENQRLTKIKHAAKHMYLVYQNPELQ
                     FITNSVYDEINIHFNHLSKDQSDDETIQLLKLLDLQNVKDQHPYELSIGQKRRLSVAT
                     ALSSKADIIFLDEPTFGLDSHNTFQLIKLFQKRINLGQSIVMVTHDDEIIERYPSRRL
                     KISDGALLDCDGDTNV"
     gene            complement(16144..16719)
                     /locus_tag="O7798_001304"
     CDS             complement(16144..16719)
                     /locus_tag="O7798_001304"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499571.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ECF transporter S component"
                     /protein_id="HDC2863570.1"
                     /translation="MSKGLKLSEILVTVLISVVFAVIYNLWWFVYNGVQATGLHLEQL
                     TNGVWFMAAIVCYLIIPKPGIALLAEFAAGAGETIIMGRFDIPTIVYAFIQGLACELV
                     FAIFKYQSRSVMVAMLAGFCTAIAAFPIDYFYGYLNEVAGWNLTLFIVFRLISGAVVA
                     GVLSYLLVKALDKTGVTKLFRPAAKEDYDNL"
     regulatory      complement(16796..16896)
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00059"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="TPP riboswitch; Derived by automated computational
                     analysis using gene prediction method: cmsearch."
                     /bound_moiety="thiamine pyrophosphate"
                     /db_xref="RFAM:RF00059"
     gene            complement(17240..17374)
                     /gene="graF"
                     /locus_tag="O7798_001305"
     CDS             complement(17240..17374)
                     /gene="graF"
                     /locus_tag="O7798_001305"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499573.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycopeptide resistance-associated protein GraF"
                     /protein_id="HDC2863571.1"
                     /translation="MSNENQNKKAAEKAKEVEEKLKDKKEEKTEDINQTKQDIQDTLN
                     "
     gene            17526..>17940
                     /locus_tag="O7798_001306"
     CDS             17526..>17940
                     /locus_tag="O7798_001306"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499574.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDC2863572.1"
                     /translation="MSFLRKHAEIIFSYLIGIVSLFTGLIILINLPLIKQLNGGKKVD
                     THVHNVWEFLNAFFSEIIKVMSRFIGNFPIVSAIVIIIFGILVMLIGHTLLRTIKYDY
                     DISIFFLVIGIMYFIITLILMTQVYGFFAVIFIIPF"
BASE COUNT         6207 a         2649 c         3364 g         5720 t
ORIGIN      
        1 tttaataagg aatttgccaa aagtaattta tcgttaaaca atgaaaagtg gaaatttgtt
       61 tgttcaaaat caaaacattt ttttaaaaag agcagttaag ttttaataat ttgataggta
      121 gtcctttggt atacagaaaa aatacaatat ttgggttaaa gttgcagatg aagttagaat
      181 aacaaataaa atggtagcaa aacatgttcg tttgctacca ttttatttgc agtatagtga
      241 tgagggctat ttaacctcaa tatacctagt ggaaatttta attgcaccat ctgaatcagt
      301 gacatgatat ttaatttgat atttaccaga tttagatgta tcaatttggc catcgacttt
      361 aattttatcg gttaaatctc catcttcttt atcaaatgca cttatgccgt ttagaaggtt
      421 ataatcttga cctttcttaa taacgatatc attagcgcct ttaatttgtg gtgtagtatt
      481 cgtcgttgca tctgcattta aatttggtgt tactagtgta gcagaaacac cgagggctga
      541 taatgactgt aatagtttat tcataatgta acctccgaat gataagtcat ttctgagtta
      601 gctttactat accttaattt atattattta cacatcatac tatagtccta atcttaccct
      661 ataaagaatg aaatttaaat ataaatttat aaataatgag gaaataatta ttattttgaa
      721 aatctgccac aattgtaaaa ttaataattt agggataatt tgaaatcaaa tataacttta
      781 ttcgacagtt tgaacttaaa tttttgtgta tcaaaacaat aagaaaaggg aggcgaaaat
      841 gataaagaac cactaatgat taactatgta gtagtacttt atcatagtca cagtttctgt
      901 gttggggccc atccccaact tgcacattat tgtaagctga cttttcgtca gcttctttgt
      961 tggggcccct gactagaatt gaaaacttgt tacaagctta ttttcattca attaactact
     1021 gtctatataa aattgttgag ccaagtacaa agtgaaatgc tcccttcaaa gccttcattt
     1081 attcaatgtc tactttgaag ggagcatttg atcgattaat gtcccagatt tttcttgtta
     1141 ttcattgcaa ttgcaaaata atatttaatg tgggttaaaa gacttcatta aaactcagtt
     1201 attagggagt gggacagaaa tgatattttc gtaaaattta tttcgtcgtc ccaccccggc
     1261 aaggttgact agaattgaaa aaagcttgtt acaagcgaat tttcgttcag tcaactactg
     1321 ccattataac tttgtagagc atagaacatt gatttatgtc tcaggctctt tacgaatcaa
     1381 tacctcgacg cattttttct gcaagcaaag tattatttaa taccatagta attgttaatg
     1441 gaccaacgcc accaggaact ggtgtaatag ctccagcaat ttctttaacc gcatcataat
     1501 caacgtcacc ttttaatttg ccattttcat ctggcgtatt gccaacatcg ataattactg
     1561 ctccttcttt gaccacatct tttgttacta aaccaggctt accaactgca ctgacaatga
     1621 catcagcatc ttttaaatat gatgccatat cttttgaacg agaatgtaag attgttactg
     1681 atgcattttt ttgaagtagt aacttagaaa ctggttgtcc gacaatatga cttcgtccaa
     1741 ttacaactgc atttttacct tctaaatcaa tatcagcatg ttttaatatt tccatgatgc
     1801 cgagcggtgt gcaaggtaca aaagtttgtt catcgatata taatttccct atatttattg
     1861 gatgaaaacc gtccacatct ttttcaggat tgattgcttc taatattttc tgttcgctaa
     1921 cttgttttgg taatggtact tgtaccaaaa taccacttac agaatcatca ttatttagtc
     1981 tatttagttc gtttaatact tcttcttcag tagctgtttc ttccaaatgt acgatttctg
     2041 aaatcatacc aattttttca gctgctttct tttttgatct aacataactt tgactagcgc
     2101 catcattacc aactaatata acggataatt taggtgtaaa acccttttct tttagcgctt
     2161 caacttgatc ttgtaacccc tgtctgtagt ctttggcaat ttgtttacca tctaaaattt
     2221 tagcaaccat aaaaacttct cctcctattg tcaatatcct aactttgtta gtttataaaa
     2281 ctaatttaca tagcaaaaga cgtaaattca aacaaaaaat caaaataaag ttcgattttt
     2341 gattgaaaaa gcagaaattg cttgttatgc tatatctata atatacaact aaagtaattc
     2401 acaattcaaa cttttgaaag ggtgtacaaa gtgaaagtag cagtcattat gggcagttct
     2461 tccgattgga aaattatgca agagagttgt aacatgttgg attattttga aattccgtac
     2521 gaaaaacaag tagtatccgc acatcgtacg ccaaaaatga tggttcaatt tgcttctgaa
     2581 gcgagagaaa gaggtataaa cattatcatt gcaggcgctg gcggtgcggc acatttacca
     2641 ggtatggttg catcattaac gacgctacca gttattggag tgccgattga aacaaaaagt
     2701 ttaaagggta tagattcttt attatcaatt gttcaaatgc caggaggtat tccggttgca
     2761 acgactgcaa ttggtgcagc aggtgctaaa aacgcaggta tacttgcagc aagaatgtta
     2821 agtattcaaa atccttcttt agttgaaaaa ctaaatcagt atgaatcttc gttaattcaa
     2881 aaagtggagg acatgcaaaa tgaacttcaa taaattaaag tttggtgcga ctattggcat
     2941 tattggtggt ggtcagcttg gaaagatgat ggcacaatca gctcaaaaaa tgggttataa
     3001 agtggttgta ttggatcctt ctgaagattg tccatgtaga tacgttgcac acgaatttat
     3061 acaagccaag tatgacgatg aaaaggcact caatcaatta ggacaaaaat gtgatgtgat
     3121 tacttatgaa tttgaaaaca tttcagccca acaattaaaa ctattatgtg aaaagtacaa
     3181 tattccgcaa ggttaccaag ctatacagtt attacaagat cgcttaactg aaaaagaaac
     3241 attaaaaagt gctggtacca aagttgtccc gttcatttca gtaaaagaat ctacagatat
     3301 tgacaaagca attgaaacat taggatatcc ttttattgta aaaactagat ttggtggcta
     3361 cgatggcaaa ggtcaagttt taattaacaa cgaaaaagac ttacaagaag gttttaaatt
     3421 aattgaaact agtgaatgcg tagctgaaaa atatttgaat atcaagaaag aagtatctct
     3481 tactgttaca agaggaaaca acaatcaaat cacttttttt ccattacaag aaaatgagca
     3541 tagaaatcaa atacttttca aaacaattgt tccagcgaga atagataaaa cagctgaggc
     3601 gaaagagcaa gttaataaaa ttatccaatc gattcatttc attggaacat ttacagttga
     3661 attttttata gatagtaaca accaattgta tgtgaacgag atagcaccaa ggcctcacaa
     3721 ttccggacat tattcaattg aagcatgtga ttattcacaa tttgatactc atattttagc
     3781 agttaccgga caatcattac caaattcaat tgaattatta aagccagcag tcatgatgaa
     3841 cttactaggt aaagatttag atttattgga aaatgaattt aatgaacatc cagagtggca
     3901 cttacatatt tatggtaagt ctgagcgtaa agatagcaga aaaatggggc atatgactgt
     3961 actaacgaat gatgtaaacc aaactgaaca agatatgtac gctaaatttg aggggagtaa
     4021 ttaaagcatg acattattat atgaaggaaa agcgaagcgc attttctcaa caaatcaaga
     4081 aaatgaatta agagttgaat ataaagatga agttactgct ggaaacgggg ctaagaaaga
     4141 cacaatggca ggtaaggggc gattaaataa tcaaattact tctattatat ttaaatattt
     4201 acaagaaaat ggaatagaaa gtcactttat taaacaatta tctgaaacag aacaattagt
     4261 taagcctgtg aaaataattc cattagaagt agttgttcgt aatattgcta gtggatctat
     4321 tacaaagcgt ttaggttttg aaaatggtga agtttttaga gaaccacttg tagaattttt
     4381 ctataaaaat gatgcgttaa atgatccgtt gataacggat gaccatgtta aattgctcaa
     4441 tatagcatca gatgaagata ttgaaatact aaaatccaaa gcattaaaga ttaataatgt
     4501 gttgaaacaa ttaatggatg ctatgaattt aaaattagta gattttaaaa tcgaatttgg
     4561 aaagactgag actggtcaaa ttttgttagc ggatgaaata tctccagata catgtcgaat
     4621 ttgggataaa gctaccaatg caaactttga taaagatgta tatagaaata acactggatc
     4681 actgattgaa acatatcaaa tatttttaaa caaattggag gatttaaaat aatgaaaaca
     4741 attgaactac atatcacatt acaaccacaa gtattagata cgcaaggaca aacgcttact
     4801 cgagctgtac atgacttagg ttatgcacaa gtgaatgata ttcgtgtagg aaaagtatta
     4861 tatatgacag tggatgaggt tagtgatgaa aaggtacaca acattattac aactctaagt
     4921 gaaaaattgt ttgcaaatac agtgattgaa gaatatagct ataaagtgtt agatgatgaa
     4981 aaggagaatg cataaaatga aatttgcggt tcttgttttt ccaggttcga attgtgatag
     5041 agacatgttt aatgctgcta ttaaaagtgg tgttgaagcg gaatatgtag attatagaga
     5101 aacatcacta agtggatttg atggcgtact tattcctggt ggattttcat tcggggatta
     5161 cttaagatct ggggcaatgg ctagtgtagc gccgattatt tcggaagtta aacgtcttgc
     5221 agctgaaggt aagccagtat taggtgtttg taatgggttt caaattttaa ctgaaatagg
     5281 cttattacct ggtgcattat tgcataacga ttcacattta tttattagta gaaatgaaga
     5341 gttagaaata gtgaataatc aaacggcatt tacaaatctt tatgaacaag gtgaaaaagt
     5401 tatatatcct gtagctcacg gtgaaggtca ttattattgt actgatgaaa tatatcaaca
     5461 attaaaagct aacaatcaaa ttattctgaa atatgtgaat aatccgaacg gttcatatga
     5521 tgatattgca ggaattgtta acgaaaaagg caatgtatgt ggcatgatgc cacatcctga
     5581 aagagcttta gaaacgttgt taggtactga tagtggtgtg aaattatttg aagcgatggt
     5641 aaaaagttgg agggaacaac atgtctaaat ttatcgaacc aagcgttgaa gaaattaaac
     5701 ttgaaaaagt atatcaagat atgggattaa gtgatcaaga atatgaaaaa gtttgcgata
     5761 ttttaggcag acaacctaac tttacagaaa caggtatctt ttctgttatg tggagtgaac
     5821 attgctctta taaacattct aaaccgtttt taaagcaatt tcctacgtca ggtgaccatg
     5881 tgcttatggg gcctggtgaa ggtgcagggg tagtcgatat aggtgataat caagccgtag
     5941 tatttaaagt agagtctcac aatcatccat cagcaattga accatatcaa ggggctgcta
     6001 caggcgttgg tggaatcatt cgtgacattg tctctattgg ggctagacct attaatttgt
     6061 taaacagtct tagatttgga gaattagata ataaacaaaa ccaaagatta cttaaaggtg
     6121 ttgtaaaggg tatcggaggt tatggtaact gcattggtat tccaacaact gctggtgaaa
     6181 tcgaatttga tgaacgttat gatggcaatc cacttgttaa tgcaatgtgt gttggtgtta
     6241 tcaatcacga catgattcaa aaaggcacag caaaaggtgt aggtaattcg gtcatttatg
     6301 ttggtttgaa aactggtcga gatggtattc atggtgctac ttttgcatct gaagaattga
     6361 cggaagaaag cgaaagtaaa cgaccttctg tacaaatcgg tgatccattt gtaggtaaaa
     6421 aattaatgga agcaacactt gaagcaatta catttgatga attagttggt attcaagata
     6481 tgggtgctgc tggtttaaca tcttcatcgt ctgaaatggc ggcaaaaggt ggtagtgggt
     6541 tacatttgag attagaacaa gtgccaacac gtgagccagg tatttctcct tatgaaatga
     6601 tgctttcaga aactcaagaa cgtatgttac tagttgttga aaaaggtact gaacaaaaat
     6661 tcttagattt atttgataag cacgaattgg atagtgctgt tataggtgaa gttacagata
     6721 caaatcgttt tgttttaaca tatgatgacg aagtttatgc tgacattcca gttgaaccac
     6781 tagctgatga agcacctgta tatattttag aaggagaaga aaaagattat aatacttcta
     6841 aaaatgatta tacacacatc gatgttaaag atactttctt taaattactt aagcatccga
     6901 ctatagcatc taaacactat ttatatgatc aatacgacca acaagttggt gccaatacga
     6961 taattaagcc aggacttcaa gcatcggtag tacgtgtgga aggcacaaat aaggcaattg
     7021 cttcaacaat tgatggtgaa gcgcgttatg tatataacaa tccatatgaa ggtggaaaga
     7081 tggtagtagc tgaagcttat cgaaatttaa ttgccgtggg tgcaacacca ttagcaatga
     7141 cagattgttt aaattatggt tctcctgaaa agaaagaaat ctatcaacag ttgatagatt
     7201 caacgaaagg tatggcagaa gcatgcgaca ttcttaagac accagtagtt tctggtaatg
     7261 tatctttata taacgaaacg aaaggtactt ctattttccc aacaccagtt gttggaatgg
     7321 taggtttgat tgaaaatgta aattatttaa atgattttga acctcaagtt ggagataaat
     7381 tatatttaat cggtgatact aaggacgact ttggtggtag tcaacttgaa aagttaattt
     7441 atggcaaagt taatcatgaa tttgagtcat tagatttgag ttcagaagtt gaaaaaggtg
     7501 aatcaatcaa gaccgctatt cgtgaaggac tattatcaca tgttcaaaca gttggtaaag
     7561 gtggcttact gattacctta gctaaactaa gtgcgcatta cggtttagga ttaaaatctt
     7621 caatagatat aacaaatgca caattgttta gtgagacgca aggccgatat gttgtttctg
     7681 ttaaatcaag taaaacttta aatattgata atgcaataga aattggactt ttaacagata
     7741 gtgataattt caaggtaaca acaccatata cagagattag tgaaaatgtt tcagatatta
     7801 aacaaatatg ggaaggggca attgctcaat gtttaactac tcaggattaa acgaagaatg
     7861 tggcgtgttt ggtatttgga atcatcctga agcagcgcaa ctaacatata tgggacttca
     7921 tagtttgcaa catcgtggtc aagaaggtgc aggtatagtt gtttctgatc aaaatgaatt
     7981 aaaaggcgag cgaggattag gcttactaac tgaagcgatt aaagatgatc aaatggaacg
     8041 attaaaagga tatcaacatg caattggtca cgtccgttat gctacttcag gtaataaagg
     8101 tattgaaaat attcaaccgt ttctgtatca cttttatgat atgagtgtag gtatttgtca
     8161 taatggtaac ctcattaatg ctaaatcatt gcgtcagaat ttagaaaaac aaggtgctat
     8221 cttccattcg tcttctgata ctgaagtcat tatgcatttg atacgtcgaa gtaaagctcc
     8281 tacttttgag gaagcgttga aagaaagttt gcgaaaagtt aaaggcggtt ttacatttgc
     8341 gattttaact aaagatgcgt tatatggcgc agtagatcca aatgctatca gaccacttgt
     8401 tgtaggtaaa atgaaagatg ggacatacat ccttgcaagt gaaacatgtg caatagatgt
     8461 gttaggtgca gaatttgttc aagatattca tgcaggtgaa tatgtcgtga ttaacgataa
     8521 aggtattaca gttaaatctt atacacatca tacgacaact gcaatttctg cgatggaata
     8581 tatttatttt gctagaccag actcaacaat agctggtaaa aatgtccatg cagtacgtaa
     8641 agcttctggt aaaaaattag cccaagaaag ccctgtaaat gctgatatgg tcatcggtgt
     8701 acccaattca tcgctatcag ctgcgagtgg ttatgctgaa gaaataggtt tgccatatga
     8761 aatgggacta gttaaaaatc aatatgttgc aagaacattt attcaaccaa ctcaagaatt
     8821 acgtgagcaa ggtgtgagag tgaagttatc tgcggtaaaa gatatagtag atgggaaaaa
     8881 tatcattctt gttgatgatt ccattgttcg cggtacgaca attcgacgca ttgtgaaaat
     8941 gttaaaagat tctggtgcaa ataaagtgca tgtgcgtata gcatcaccgg aatttatgtt
     9001 tccaagtttt tacggaatcg atgtttcaac tacggcagaa ttaatttctg caagcaaatc
     9061 acctgaagaa attaaagatt atattggcgc tgattcatta gcatatctat ctgtagatgg
     9121 gttaattgaa tcaattggtt tagattatga cgcgccatat agtggcttat gtgtagaaag
     9181 tttcactgga gattatcctg cagggttata tgattatgaa gcaaattata aagcgcattt
     9241 aagtcatcga caaaagcaat atatttctaa aaacaaacac ttttttgata gcgagggaaa
     9301 tttaaatgtc taaagcatat gaacaatctg gtgtaaatat tcatgctggt tatgaagctg
     9361 tagaaagaat gtctagtcat gttaaacgta cgatgcgtaa agaagttatc ggtggtttag
     9421 gtggattcgg tgctacattt gatttatcac aattaaatat gacagcgcca gttttagttt
     9481 ctggaacaga cggagtaggt acgaaattaa aactagctat cgactatggt aaacatgatt
     9541 cgataggtat cgatgcagtc gcaatgtgtg ttaatgatat tttaacgaca ggtgcagaac
     9601 cattatattt tttagattac attgctacaa acaaagttgt tcctgaagtt attgaacaaa
     9661 ttgttaaagg tattagtgat gcatgtgttg aaacgaatac tgcacttatc ggtggagaga
     9721 ctgctgaaat gggtgaaatg tatcacgaag gcgaatatga tgtagctgga tttgctgttg
     9781 gagcagttga aaaggatgac tatgtagatg gttcagaagt gaaagaggga caagttgtta
     9841 tagggcttgc gtcaagtggc attcattcaa atggatacag tttagtgcgc aaattaatta
     9901 atgaatcagg cattgatttg gcatcaaact tcgataatcg tccatttatc gatgtctttt
     9961 tagaaccaac taaattatat gtcaaacctg tacttgcttt gaaaaaagaa gtttctatta
    10021 aggcaatgaa tcatattact ggtggaggtt tttatgaaaa tattccacgt gcattgccag
    10081 ccggatatgc tgctagaatt gatactacat catttccaac accaaaaata tttgattggt
    10141 tacaacaaca aggcaatata gacacaaatg aaatgtataa catttttaat atgggtattg
    10201 gctatacggt tatcgttgat gaaaaagatg tatcacgcgc tttgaagatt ttagcagaac
    10261 aaaatgtgga agcctatcaa attggtcata ttgtgaaaaa tgagtcaact gcaattgaat
    10321 tgttgggggt ataacaatgg ttaaaattgc gatttttgca tcaggttcag gaagtaactt
    10381 tgaaaatata gttgagcatg ttgaatcagg aaaacttgaa aatattgaag ttacggcgct
    10441 atatacggat catcaaaatg cgttttgtat agatagagca aaaaagcacg atattcctgt
    10501 ttatattaat gaaccaaaac aatttgattc aaaagcagcg tatgaacaac atttagtaac
    10561 attattaaat gaagataagg tagagtggat tattctagct ggctacatgc gtctaattgg
    10621 tccagactta ttagcttcat ttgaaggtaa aatattgaat atacatccat ctctattgcc
    10681 gaaatataag gggattgacg caataggcca agcatatcat agtggcgata ctattactgg
    10741 ttcgacagta cattatgttg atagtggtat ggatacggga gaaattattg aacagagaaa
    10801 atgtgatatt agaccggacg attcaaaaga acaattagaa gagaaagtaa aaaaattgga
    10861 atatgagtta tatccaagtg ttattgctaa aattgtaaaa taaggagtat gtatgtgatg
    10921 aagaaagcta ttttgagcgt atcaaataaa acaggtattg tagagtttgc taaagcgtta
    10981 acgcaattaa attatgaatt atattcaaca ggtggtacta aacgtatatt agatgaagca
    11041 aatgtaccag ttcgttctgt ttcagactta acacattttc cagaaataat ggatggccgt
    11101 gttaaaacat tacatccggc tgttcatggt ggcattttag ctgatcgaaa taaaccgcag
    11161 catttaaatg aattatcaga acaacatata gatttaattg atatggtagt agttaattta
    11221 tatccattcc aacaaactgt tgcaaaccct gatgtgacga tggacgaagc aattgaaaat
    11281 attgatattg gtggtccaac aatgttacgt gctgcagcta aaaactataa acatgtaaca
    11341 acaattgtac atccggcaga ttatcaagaa gtattgacgc gattaagaaa cgattcgtta
    11401 gatgagtcat atagacaatc attaatgatt aaagtttttg agcatactgc agaatatgat
    11461 gaagcgattg tacgtttctt taaaggggat aaagaaactt taagatatgg agaaaatcca
    11521 caacaatcag cgtattttgt gagaacttcg aatgctaagc acacgattgc aggcgctaaa
    11581 caattacatg ggaaacaatt aagctataac aatattaaag atgcagatgc tacactagct
    11641 ttagttaaaa agtttgatac acctgctaca gttgcggtta aacacatgaa tccatgtggt
    11701 gttggtatcg gtgacacgat agaacaagca tttcaacatg cgtatgaagc ggatagtcaa
    11761 tcaatatttg gtggaattgt tgcattaaac cgagctgtaa cacctgagtt agcagagcaa
    11821 ttgcatagta tctttttgga agtcattatt gcaccaaaat ttacagatga agcattagat
    11881 attttaaaac aaaagaagaa tgtaagatta ttagaaattg atatgactat agacagtaac
    11941 gaagaagagt ttgtttcagt atctggcgga tatttagttc aagataaaga caattatgtc
    12001 gtgccaaaag aagaaatgaa agttgttaca gaagtagcac ctacagatga acaatgggaa
    12061 gcaatgttat taggatggaa agttgtacca tcagtaaaaa gtaatgcaat tattttaagt
    12121 aataataaac aaactgtagg tataggtgct ggacaaatga atcgtgtcgg tgctgctaaa
    12181 attgcgttag agagagctat tgaaatcaat gatcatgtag cgttagtatc tgatggattt
    12241 ttccctatgg gagatacagt tgaacttgca gcacaacatg gtataaaggc aattatccaa
    12301 ccgggtggtt cgattaaaga tcaagattca attgatatgg ctaataaaca tggtattgca
    12361 atggtagtca caggcactcg acattttaaa cactaatttt aaaggggcgt aacataaatg
    12421 aatgtattag taattggtgc tggtggacga gaacatgcac ttgcatataa acttaatcaa
    12481 tcgaatctag ttaaacaagt gtttgtcatt ccaggtaatg aggcaatgac acctatagct
    12541 gaagtacaca ctgaaatttc agaatctgat catcaagcga tactagattt tgctaaacgg
    12601 caaaatgttg attgggtagt tataggtcca gaacagccgc taattgatgg attagcagac
    12661 attttacgag cgaatggttt caaagtgttt ggtccaaata agcaagcagc tcaaatcgaa
    12721 ggctcaaaat tatttgctaa aaagataatg gaaaaatata atattccaac tgctgattat
    12781 aaagaagttg agcgaaaaaa ggatgcttta acatatattg aaaactgtga attgcccgtt
    12841 gttgtcaaga aagatgggtt agctgctggg aaaggcgtta ttattgcaga tactattgaa
    12901 gcagccagaa gtgctattga gattatgtat ggtgatgaag aagaaggtac tgttgtattt
    12961 gaaacgtttt tagaaggtga agagttctcg ctaatgacat ttgttaatgg tgatttagca
    13021 gtacctttcg actgtattgc acaagatcat aaacgcgcat ttgatcatga tgaaggacca
    13081 aatactggtg gtatgggggc ttattgtcca gtaccacata ttagtgacga tgttttaaaa
    13141 cttacaaatg aaacaattgc acaacccatt gcaaaggcaa tgcttaatga aggttatcaa
    13201 ttcttcggtg tattatacat tggtgctatt ttaactaaag atggtccaaa agtaatagaa
    13261 tttaatgccc gttttggtga tcctgaagct caagtattat taagtcgcat ggaaagtgat
    13321 ttaatgcagc atattattga tttagatgaa ggaaaacgta ctgaattcaa atggaaaaat
    13381 gaatctattg taggggtcat gttggcatca aaaggatatc ctgatgcata tgaaaaaggg
    13441 cataaagtaa gtggctttga tttaaatgaa aactattttg ttagtggatt aaagaagcaa
    13501 ggtgatacct ttgttacttc aggtggtaga gttatacttg ccatcggaaa aggtgacaat
    13561 gtacaagatg cacagcgaga cgcatacaaa aaagtatcac aaatacaaag tgaccattta
    13621 ttctatcgtc atgacattgc gaataaagca ctacaactta aataagtaaa tttaaaatac
    13681 taagattagc tatgaacgaa tctataacga tagatttttt catagctttt ttagttgtag
    13741 agtctaggac attgatttct gtaccaaatt tgtgattatg catatgtaat acaaaagagg
    13801 cgccacaaca tgtttggatg aacaaaataa catgtttgtg gcacctcttt tgtttagtat
    13861 ggaataaatg gttttctttt tctatacaat gaatttctaa tttagtatct atacaattat
    13921 ggataaaatt taacctacac gaccaagacg aacatcatct atgcccgtga tgggtaaggt
    13981 gattgaacaa taatatgcca tagtaataat ggcaattaaa actataataa agattatatc
    14041 tttatatgag aaaggtacgt tgtaatagta agtacgagga ccatctctaa atcctttcga
    14101 ctccatcgca actgataatt gatgtgcctt tctaatattt tggcttaata gaggtataat
    14161 taaatgctta aatcgcttta accctctata atttgccgcg tctatcatct gatagcgcat
    14221 ttttaaagat ctgcgaagct gtattaaaga actaatcatt aaaggtatca tacgaatggc
    14281 agccatgaat gcataagcaa cttttgattt aacctttaaa tgttgcatta aactataaaa
    14341 tatcatgaca acctgagatg taagtgcgat taagataccg aaaaatgaaa tagcaatggt
    14401 tcttaatgat acatgtaaac cacgaactaa actttctgtt gtaatatgga taaatccgaa
    14461 tttcaaaatt gtatggctac cattcccgta taaaatcatg aacagggaag agagtaatgc
    14521 aaagccaata cttatagtta taaaaattgc tgtaatttta aactgagtac cattaaacat
    14581 caataagaaa actaacatta agatagtgat ataaagcata aaatcgaaat tatgcacaaa
    14641 tataataaag aaaaatagta taattccaag aaatagtttc gttataatgt tgacatcatc
    14701 aacaaatgat tgccgaactt tccattgctc atacattcgt atcaccatca caatctagta
    14761 acgcaccatc tgaaatttta agtcttcttg atggataacg ttcaattatt tcatcgtcat
    14821 gtgtaaccat gacaatactt tgtcccaaat taattcgctt ttggaaaagt ttgatcaact
    14881 ggaatgtatt atggctatca agtccaaatg tcggttcatc taaaaagata atatcagctt
    14941 tagaacttag tgcggtagct acgctaaggc gtcgtttttg accaatagac aactcataag
    15001 gatgttgatc ttttacattt tgtaaatcta aaagttttaa aagttgtatc gtttcatcat
    15061 cactttgatc tttagaaagg tgattaaaat gaatgttaat ttcatcataa accgaatttg
    15121 ttataaattg taattctggg ttttgataaa ctaggtacat gtgttttgct gcatgtttaa
    15181 tttttgttaa acgctgattt tcaaaataaa catcaccttg atatttaatc aattgcataa
    15241 ttgattcaag caaggttgtt ttaccactac catttgcccc tgtaattgta atccactcac
    15301 ctagaccaat ttctaaatct gagaatgaga gcaatgttga tttaccgcga ataatacgtc
    15361 catttttaaa ttgtaataag tgtgagtttg ttgttggaaa gtcaacacga cttggtgcga
    15421 attcccatgc acgtggatgc cacacaccat attcactgag taaatgaaca tacttctgta
    15481 atatgatttc aggacattca tcggcaatga tatttccgtt ataatccatc aaaatgacgc
    15541 ggtcgacatg attccagatg tgtttaactt tatgttcaac gattacaacc gtttgatctt
    15601 cccaaagttc aattagttta gtccataaat cttctgttgc ttgaacatct aacattgctg
    15661 tcggttcatc taaaaacaat gtttttgatt gttgaagaat ggtttcaaca attgccaatt
    15721 tctgtttcat cccgccactt aaatctttga tatacgtttc aggggtaaca tttaaattga
    15781 ccatatttaa agcattgata attaacgcat ccatgtcttc acgtggtaat tgtctatttt
    15841 ctaaaacgaa tgcaagttct tcgtatactt ttggcataca aaactggcta tcagggtctt
    15901 ggaaaataac gccacttaat ggggcaacga ttagttcatc atatttcata ggtaattcaa
    15961 ttaaattagg aacaatacca cttaatacat tcagaagtgt acttttaccg caaccagaag
    16021 gaccgagtaa aagtactttt tctttgtctt gaatagtgat atttaaatga tcgaaaattt
    16081 tacgttgacc acttggatat tttaatcgta aatcacttac ttttaacact ctgaatgctc
    16141 ctcttataag ttgtcgtaat cttctttagc agctggtcta aataattttg ttacgcctgt
    16201 cttatctaaa gcttttacta aaaggtaaga taggacgccg gcgactactg caccactaat
    16261 taatctaaat acgatgaata atgttaagtt ccaacctgca acttcattta aataaccata
    16321 gaaataatct atcgggaaag ccgcgattgc tgtacaaaaa cctgctaaca tagctaccat
    16381 aactgaacgt gattgatatt taaaaattgc aaagacaagt tcacacgcta aaccttgtat
    16441 aaaagcgtaa acgattgtcg gaatatcgaa acgacccata atgatagttt cgccggcacc
    16501 tgcagcaaat tcagccagta aagcaatacc tggttttgga ataattagat agcagacaat
    16561 cgctgccatg aaccaaaccc cgtttgttaa ttgttcgagg tgaaggcctg tagcttgcac
    16621 accattgtaa acaaaccacc ataaattgta aataactgcg aatactactg aaataagtac
    16681 ggttactagt atttcagata gctttaaacc ttttgacatt tttacatcct cctaataaaa
    16741 aaacgcacaa ccatccatag gaaagttatg cgttcacaat atatattagt aaaacatatg
    16801 tatagtaaca ctttcctacg ctagttcaag ctagatcagg ttcaaagggt ttgagggcaa
    16861 gcctcatctc agtataaaac acccctagtg tgtgcgattt atttaattaa ttatactgta
    16921 agacgtttgt aaacttatgt caataggttg tcttcatgaa atttcgttta attcgattta
    16981 aaatttataa tattagcatt ggatttaaat tgaagatgta gtaggaatgt tagtaattaa
    17041 agatataaaa atatgtgaca tgtaataata ttgagctgat aaatgaagag ggatacttat
    17101 caatcatacc tctttaacaa cagtgaagaa cccgtgcata atggcttacg aattatagtt
    17161 tataaggaag aagagggata catgcgccga gcacatgcat aaaagcccct aacaactaaa
    17221 agttgtaagg ggatttaaat taatttagtg tatcttggat atcttgtttt gtttgattaa
    17281 tatcttctgt tttttcttct tttttatctt ttaatttttc ttcaacttct ttagcttttt
    17341 ctgctgcttt tttattttga ttttcattag acatgattaa ttcctcccaa attggataat
    17401 tatttatata taaatcttac ccggttgtac tttcgttaaa cttttctaag tctatagcac
    17461 tatttattca tttatctaaa gacaacaaca ttagattaat atataatgat tttgaggtga
    17521 acataatgtc ttttcttagg aaacacgccg aaattatttt tagctattta atcggtatcg
    17581 tttcactctt cactggtctc attattttaa ttaacttgcc attaattaaa caattaaatg
    17641 gtggtaaaaa agttgataca catgttcata atgtgtggga atttctgaat gcatttttca
    17701 gtgaaattat taaagtaatg agtcgattta taggtaattt ccctatagtt agtgcaattg
    17761 tgataattat attcggtatt ttagttatgt tgattggtca tacattactt agaactatta
    17821 agtatgacta tgatatttct atctttttct tagttatcgg tatcatgtac tttattatta
    17881 ctcttatatt aatgactcaa gtttatggat tctttgcagt gattttcatt attccattta
//
LOCUS       DALPQQ010000047        17885 bp    DNA     linear   BCT 22-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus strain K18-6-464
            SAMD00233528-rid16434743.denovo.047, whole genome shotgun sequence.
ACCESSION   DALPQQ010000047 DALPQQ010000000
VERSION     DALPQQ010000047.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMD00233528
            Sequence Read Archive: DRR236061
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 17885)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 17885)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001543423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001543423.1
            Genome Coverage       :: 77x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/22/2022 17:09:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,811
            CDSs (total)                      :: 2,743
            Genes (coding)                    :: 2,689
            CDSs (with protein)               :: 2,689
            Genes (RNA)                       :: 68
            rRNAs                             :: 2, 4, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 4, 2 (16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 54
            CDSs (without protein)            :: 54
            Pseudo Genes (ambiguous residues) :: 0 of 54
            Pseudo Genes (frameshifted)       :: 27 of 54
            Pseudo Genes (incomplete)         :: 27 of 54
            Pseudo Genes (internal stop)      :: 10 of 54
            Pseudo Genes (multiple problems)  :: 10 of 54
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..17885
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMD00233528-rid16434743.denovo.047"
                     /strain="K18-6-464"
                     /db_xref="taxon:1280"
                     /geo_loc_name="Japan: Niigata"
     gene            <1..4581
                     /locus_tag="O7798_001307"
     CDS             <1..4581
                     /locus_tag="O7798_001307"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499969.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GA module-containing protein"
                     /protein_id="HDC2863573.1"
                     /translation="RDQQQAVTTVNALPNLNHAQQQALTDAINAAPTRTEVAQHVQTA
                     TELDHAMETLKNKVDQVNTDKAQPNYTEASTDKKEAVDQALQAAESITDPTNGSNANK
                     DAVDQVLTKLQEKENELNGNERVAEAKTQAKQTIDQLTHLNADQIATAKQNIDQATKL
                     QPIAELVDQATQLNQSMDQLQQAVNEHANVEQTVDYTQADSDKQNAYKQAIADAENVL
                     KQNANKQQVDQALQNILNAKQALNGDERVALAKTNGKHDIDQLNALNNAQQDGFKGRI
                     DQSNDLNQIQQIVDEAKALNRAMDQLSQEITDNEGRTKGSTNYVNADTQVKQVYDETV
                     DKAKQALDKSTGQNLTAKQVIKLNDAVTAAKKALNGEERLNNRKAEALQRLDQLTHLN
                     NAQRQLAIQQINNAETLNKASRAINRATKLDNAMGAVQQYIDEQHLGVISSTNYINAD
                     DNLKANYDNAIANAAHELDKVQGNAIAKAEAEQLKQNIIDAQNALNGDQNLANAKDKA
                     NAFVNSLNGLNQQQQDLAHKAINNADTVSDVTDIVNNQIDLNDAMETLKHLVDNEIPN
                     AEQTVNYQNADDNAKTNFDDAKRLANTLLNSDNTNVNDINGAIQAVNDAIHNLNGDQR
                     LQDAKDKAIQSINQALANKLKEIEASNATDQDKLIAKNKAEELANSIINNINKATSNQ
                     AVSQVQTAGNHAIEQVHANEIPKAKIDANKDVDKQVQALIDEIDRNPNLTDKEKQALK
                     DRINQILQQGHNGINNAMTKEEIEQAKAQLAQALQDIKDLVKAKEDAKQDVDKQVQAL
                     IDEIDQNPNLTDKEKQALKDRINQILQQGHNDINNAMTKEAIEQAKERLAQALQDIKD
                     LVKAKEDAKNDIDKRVQALIDEIDQNPNLTDKEKQALKDRINQILQQGHNDINNALTK
                     EEIEQAKAQLAQALQDIKDLVKAKEDAKNAIKALANAKRDQINSNPDLTPEQKAKALK
                     EIDEAEKRALQNVENAQTIDQLNRGLNLGLDDIRNTHVWEVDEQPAVNEIFEATPEQI
                     LVNGELIVHRDDIITEQDILAHINLIDQLSAEVIDTPSTATISDSLTAKVEVTLLDGS
                     KVIVNVPVKVVEKELSVVKQQAIESIENAAQQKINEINNSVTLTLEQKEAAIAEVNKL
                     KQQAIDHVNNASDVHSVEEIQQQEQAHIEQFNPEQFTIEQAKSNTIKSIEDAIQHMID
                     EIKARTDLTDKEKQEAIAKLNQLKEQAIQAIQRAQSIDEISEQLEQFKAQMKAANPTA
                     KELAKRKQEAISRIKDFSNEKINSIRNSEIGTADEKQAAMNQINEIVLETIRDINNAH
                     TLQQVEAALNNGIARISAVQIVTSDRAKQSSSTGNESNSHLTIGYGTANHPFNSSTIG
                     HKKKLDEDDDIDPLHMRHFSNNFGNVIKNAIGVVGISGLLASFWFFIAKRRRKEDEED
                     VEVTNENTDEKVLKDNEHSPLLFAKRRKDKEEDVETTTSIESKDEDVPLLLAKKKNQK
                     DNQSKDKKSASKNTSKKVAAKKKKKKAKKNKK"
     gene            complement(4640..5041)
                     /locus_tag="O7798_001308"
     CDS             complement(4640..5041)
                     /locus_tag="O7798_001308"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499968.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease HI family protein"
                     /protein_id="HDC2863574.1"
                     /translation="MAKINFDAATKGNPGISTCAIVIKEDEQHYTYTHELGEMDNHTA
                     EWAACIYALEHARELNVQNALLYTDSKLIADSIEAGYVKNANFKPYFDQIEIFEKDFD
                     LLFVKWIPREQNKEANQHAQQALYKLIKKNK"
     gene            complement(5582..6286)
                     /locus_tag="O7798_001309"
     CDS             complement(5582..6286)
                     /locus_tag="O7798_001309"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499965.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="queuosine precursor transporter"
                     /protein_id="HDC2863575.1"
                     /translation="MYNEILGLVTFIATFVLMVLMYRFFGKQGLIAWVAIGTIIANIQ
                     VIKTVEIFGISATLGNVMFASIYLATDILNDIYGRRVAKRAVWLGFSSTLIMIIVMQL
                     SLHFIPAPEDMAQKALHAIFDVVPRIALGSIVAYIIGQHIDVFIFSLIKKVFSSDKTF
                     FIRAYGSTFLSSIIDTALFVAIAFIGSLPGTVVFEIFITTYVLKLASTVFNVPFGYIA
                     KSFYRKGKIDKLDQGY"
     gene            6531..6725
                     /locus_tag="O7798_001310"
     CDS             6531..6725
                     /locus_tag="O7798_001310"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002439757.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc-finger domain-containing protein"
                     /protein_id="HDC2863576.1"
                     /translation="MSRILTFSEQNALAKIDDLMNTYCNQCPIKTRLRKLEGKTKAHH
                     FCINECSIGKEIKQLGNELQ"
     gene            6737..6988
                     /locus_tag="O7798_001311"
     CDS             6737..6988
                     /locus_tag="O7798_001311"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499963.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NifU N-terminal domain-containing protein"
                     /protein_id="HDC2863577.1"
                     /translation="MKIISISETPNHNTMKITLSESREGMTSDTYTKVDDSQPAFIND
                     ILKVEGVKSIFHVMDFISVDKENDANWETVLPKVEAVFE"
     gene            7026..8150
                     /locus_tag="O7798_001312"
     CDS             7026..8150
                     /locus_tag="O7798_001312"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499962.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="virulence factor C"
                     /protein_id="HDC2863578.1"
                     /translation="MEILRIEPTPSPNTMKVVLSYTREDKLSNTYKKVEETQPRFINQ
                     LLSIDGITSIFHVMNFLAVDKAPKADWEVILPDIKAAFSDANKVLESVNEPQIDNHFG
                     EIKAELLTFKGIPYQIKLTSADQELREQLPQTYVDHMTQAQTAHDNIVFMRKWLDLGN
                     RYGNIQEVMDGVLEEVLATYPESQLPVLVKHALEENHATNNYHFYRHVSLDEYHATDN
                     WKTRLRMLNHFPKPTFEDIPLLDLALSDEKVPVRRQAIVLLGMIESKEILPYLYKGLR
                     DKSPAVRRTAGDCISDLGYPEALPEMVLLLDDPQKIVRWRAAMFIFDEGNAEQLPALK
                     AHINDNAFEVKLQIEMAISRIENGDEALGSVWKQMANRTI"
     gene            8166..8603
                     /locus_tag="O7798_001313"
     CDS             8166..8603
                     /locus_tag="O7798_001313"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499961.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BrxA/BrxB family bacilliredoxin"
                     /protein_id="HDC2863579.1"
                     /translation="MNAYDAYMKEIAQQMRGELTQNGFTSLETSEAVSEYMNQVNADD
                     TTFVVINSTCGCAAGLARPAAVAVATQNEHRPTNTVTVFAGQDKEATATMREFIQQAP
                     SSPSYALFKGQDLVYFMPREFIEGRDINDIAMDLKDAFDENCK"
     gene            9027..9983
                     /locus_tag="O7798_001314"
     CDS             9027..9983
                     /locus_tag="O7798_001314"
                     /EC_number="2.1.1.45"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499960.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thymidylate synthase"
                     /protein_id="HDC2863580.1"
                     /translation="MLNSFDAAYHSLCEEVLEIGNTRNDRTNTGTISKFGHQLRFDLS
                     KGFPLLTTKKVSFKLVATELLWFIKGDTNIQYLLKYNNNIWNEWAFENYIKSDEYKGP
                     DMTDFGHRALSDPEFNEQYKEQMKQFKQRILEDDTFAKQFGDLGNVYGKQWRDWVDKD
                     GNHFDQLKTVIEQIKHNPDSRRHIVSAWNPTEIDTMALPPCHTMFQFYVQDGKLSCQL
                     YQRSADIFLGVPFNIASYALLTHLIAKECGLEVGEFVHTFGDAHIYSNHIDAIQTQLA
                     RESFNPPTLKINSDKSIFDINYEDLEIVDYESHPAIKAPIAV"
     gene            10183..10662
                     /locus_tag="O7798_001315"
     CDS             10183..10662
                     /locus_tag="O7798_001315"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001830952.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydrofolate reductase"
                     /protein_id="HDC2863581.1"
                     /translation="MTLSILVAHDLQRVIGFENQLPWHLPNDLKHVKKLSTGHTLVMG
                     RKTFESIGKPLPNRRNVVLTSDTSFNVEGVDVIHSIEDIYQLPGHVFIFGGQTLFEEM
                     IDKVDDMYITVIEGKFRGDTFFPPYTFEDWEVASSVEGKLDEKNTIPHTFLHLIRKK"
     gene            10677..11516
                     /gene="fakB2"
                     /locus_tag="O7798_001316"
     CDS             10677..11516
                     /gene="fakB2"
                     /locus_tag="O7798_001316"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499958.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fatty acid kinase binding subunit FakB2"
                     /protein_id="HDC2863582.1"
                     /translation="MTKQIIVTDSTSDLSKEYLEANNIHVIPLSLTIEGASYVDQVDI
                     TSEEFINHIENDEDVKTSQPAIGEFISAYEELGKDGSEIISIHLSSGLSGTYNTAYQA
                     SQMVDANVTVIDSKSISFGLGYQIQHLVELVKEGVSTSEIVKKLNHLRENIKLFVVIG
                     QLNQLIKGGRISKTKGLIGNLMKIKPIGTLDDGRLELVHNARTQNSSIQYLKKEIAEF
                     IGDHEIKSIGVAHANVIEYVDKLKKVFNEAFHVNNYDINVTTPVISAHTGQGAIGLVV
                     LKK"
     gene            11602..12135
                     /gene="msrA"
                     /locus_tag="O7798_001317"
     CDS             11602..12135
                     /gene="msrA"
                     /locus_tag="O7798_001317"
                     /EC_number="1.8.4.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499957.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide-methionine (S)-S-oxide reductase MsrA"
                     /protein_id="HDC2863583.1"
                     /translation="MTKEYATLAGGCFWCMVKPFTSYPGIKSVVSGYSGGHVDNPTYE
                     QVCTNQTGHVEAVQITFDPEVTSFENILDIYFKTFDPTDDQGQFFDRGESYQPVIFYH
                     DEHQKKAAEFKKQQLNEQGIFKKPVITPIKPYKNFYPAEDYHQDYYKKNPVHYYQYQR
                     GSGRKAFIESHWGNQNA"
     gene            12128..12556
                     /gene="msrB"
                     /locus_tag="O7798_001318"
     CDS             12128..12556
                     /gene="msrB"
                     /locus_tag="O7798_001318"
                     /EC_number="1.8.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499956.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide-methionine (R)-S-oxide reductase MsrB"
                     /protein_id="HDC2863584.1"
                     /translation="MLKKDKSELTDIEYIVTQENGTEPPFMNEYWNHFAKGIYVDKIS
                     GKPLFTSEEKFHSECGWPSFSKALDDDEIIELVDKSFGMLRTEVRSEESNSHLGHVFN
                     DGPKESGGLRYCINSAAIQFIPYEKLEELGYGDLISHFDK"
     gene            12568..13068
                     /locus_tag="O7798_001319"
     CDS             12568..13068
                     /locus_tag="O7798_001319"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499955.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS glucose transporter subunit IIA"
                     /protein_id="HDC2863585.1"
                     /translation="MFKKLFGKGKEVQKDIAIYAPLTGEFVKIEDIPDPVFAQKMMGE
                     GFGINPTEGEVVSPIAGRVDNVFPTKHAIGLKADNGLELLVHIGLDTVQLDGEGFEVL
                     VSSGDEVNVGDPLVRFNLEYINNNAKSVISPIIITNTDQAASINIYDENAVIKGETKV
                     IDVTMN"
     gene            13068..13289
                     /locus_tag="O7798_001320"
     CDS             13068..13289
                     /locus_tag="O7798_001320"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499954.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YozE family protein"
                     /protein_id="HDC2863586.1"
                     /translation="MKNYSFYQFVMTVRGRHDDKGRLAEEIFDDLAFPKHDDDFNILS
                     DYIETHGDFTLPMSVFDDLYEEYTEWLKF"
     gene            13481..14971
                     /locus_tag="O7798_001321"
     CDS             13481..14971
                     /locus_tag="O7798_001321"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499952.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S41 family peptidase"
                     /protein_id="HDC2863587.1"
                     /translation="MDDKQHTSSSDDERAEIATSNQDQETNSSKRVHLKRWQFISILI
                     GTILITAVITVVAYIFINQKISGLNKTDQANLNKIENVYKILNSDYYKKQDSDKLSKA
                     AIDGMVKELKDPYSEYLTKEQTKSFNEGVSGDFVGIGAEMQKKNDQIMVTSPMKGSPA
                     ERAGIRPKDVITKVNGKSIKGKALDEVVKDVRGKENTEVTLTVQRGSEEKDVKIKREK
                     IHVKSVEYKKKGKVGVITINKFQNDTSGELKDAVLKAHKDGLKKIVLDLRNNPGGLLD
                     EAVKMANIFIDKGKTVVKLEKGKDTEAIQTSNDALKEAKDMDISILVNEGSASASEVF
                     TGALKDYNKAKVYGSKTFGKGVVQTTREFKDGSLLKYTEMKWLTPDGHYIHGKGIKPD
                     VTIDTPKYQSLNVIPNTKTFKVGDDDKNIKTIKIGLSALGYKVDNESTQFDKALENQV
                     KAFQQANKLEVTGEFNKETNNKFTELLVEKANKHDDVLDKLINILK"
     gene            15371..15880
                     /locus_tag="O7798_001322"
     CDS             15371..15880
                     /locus_tag="O7798_001322"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499951.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HDC2863588.1"
                     /translation="MIRLGKMSDLDQILNLVEEAKELMKEHDNEQWDDQYPLLEHFEE
                     DIAKDYLYVLEENDKIYGFIVVDQDQAEWYDDIDWPVNREGAFVIHRLTGSKEYKGAA
                     TELFNYVIDVVKARGAEVILTDTFALNKPAQGLFAKFGFHKVGEQLMEYPPYDKGEPF
                     YAYYKNLKE"
     gene            15892..16962
                     /locus_tag="O7798_001323"
     CDS             15892..16962
                     /locus_tag="O7798_001323"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499950.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="undecaprenyldiphospho-muramoylpentapeptide
                     beta-N-acetylglucosaminyltransferase"
                     /protein_id="HDC2863589.1"
                     /translation="MTKIAFTGGGTVGHVSVNLSLIPTALSQGYEALYIGSKNGIERE
                     MIESQLPEIKYYPISSGKLRRYISLENAKDVFKVLKGILDARKVLKKEKPDLLFSKGG
                     FVSVPVVIAAKSLNIPTIIHESDLTPGLANKIALKFAKKIYTTFEETLNYLPKEKADF
                     IGATIREDLKNGNAHNGYQLTGFNENKKVLLVMGGSLGSKKLNSIIRENLDALLQQYQ
                     VIHLTGKGLKDAQVKKSGYIQYEFVKEDLTDLLAITDTVISRAGSNAIYEFLTLRIPM
                     LLVPLGLDQSRGDQIDNANHFADKGYAKAIDEEQLTAQILLQELNEMEQERTRIINNM
                     KSYEQSYTKEALFDKMIKDALN"
     gene            16979..17593
                     /locus_tag="O7798_001324"
     CDS             16979..17593
                     /locus_tag="O7798_001324"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499949.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphatase PAP2 family protein"
                     /protein_id="HDC2863590.1"
                     /translation="MSQWKRISLLIVFTLVFGIIAFFHESRLGKWIDNEVYEFVYSSE
                     SFITTSIMLGATKVGEVWAMLCISLLLVAYLMLKRHKIEALFFALTMALSGILNPALK
                     NIFDRERPTLLRLIDITGFSFPSGHAMGSTAYFGSGIYLLNRLNQGNSKGILIGLCAA
                     MILLISISRVYLGVHYPTDIIAGIIGGLFCIILSTLLLRNKLIN"
     gene            17710..>17885
                     /locus_tag="O7798_001325"
     CDS             17710..>17885
                     /locus_tag="O7798_001325"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499948.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDC2863591.1"
                     /translation="MTNPTRTKRCGGDVLCGIDNHFQLLLYISENHCQLETKTFFEYF
                     LRIVNKTHDYAILE"
BASE COUNT         6867 a         2669 c         3150 g         5199 t
ORIGIN      
        1 cgtgatcaac aacaagcagt aacaactgta aatgcattgc caaacttaaa tcatgcacaa
       61 caacaagcat taactgatgc tataaatgca gcgcctacaa gaacagaggt tgcacaacat
      121 gttcaaactg ctactgaact tgatcacgcg atggaaacat tgaaaaataa agttgatcaa
      181 gtgaatacag ataaggctca accaaattac actgaagcgt caactgataa aaaagaagca
      241 gtagatcaag cgttacaagc tgcagaaagc attacagatc caactaatgg ttcaaatgcg
      301 aataaagacg ctgtagacca agtattaact aagcttcaag aaaaagaaaa tgagttaaat
      361 ggtaatgaga gagtcgctga agctaaaaca caagcgaaac aaactattga ccaattaaca
      421 catttaaatg ctgatcaaat tgcaactgct aaacaaaaca ttgatcaagc gacgaaactt
      481 caaccaattg ctgaattagt agatcaagca acgcaattga atcaatctat ggatcaatta
      541 caacaagcag ttaatgaaca tgctaacgtt gagcaaactg tagattacac acaagcagat
      601 tcagataaac aaaatgctta taaacaagct attgctgatg ctgaaaatgt attgaaacaa
      661 aatgcgaata agcaacaagt ggatcaagca cttcaaaata ttttaaatgc aaaacaagca
      721 ttaaatggtg atgaacgtgt agcacttgct aaaacaaatg gtaaacatga catcgaccaa
      781 ttgaatgcat taaacaatgc tcaacaagat ggatttaaag gtcgcatcga tcaatcaaac
      841 gatttaaatc aaatccaaca aattgtagat gaggctaagg cacttaatcg tgcaatggat
      901 caattgtcac aagaaatcac tgacaatgaa ggacgcacga aaggtagcac gaactatgtc
      961 aatgcagata cacaagtcaa acaagtatat gatgaaacgg ttgataaagc gaaacaagca
     1021 cttgataaat cgactggtca aaacttaact gcaaaacaag ttatcaaatt aaatgatgca
     1081 gtcactgcag ctaagaaagc attaaatggt gaagaaagac ttaataatcg taaagctgaa
     1141 gcattacaaa gattggatca attaacacat ctaaacaatg ctcaaagaca attagcaatc
     1201 caacaaatta ataatgctga aacgctaaat aaagcatctc gagcaattaa tagagcaact
     1261 aaattagata atgcaatggg tgcagtacaa caatatattg acgaacagca ccttggtgtt
     1321 atcagcagca caaattacat caatgcagat gacaatttga aagcaaatta tgataatgca
     1381 attgcgaatg cagcacatga gttagataaa gtgcaaggta atgcaattgc aaaagctgaa
     1441 gcagagcaat tgaaacaaaa tattatcgat gctcaaaatg cattaaatgg agaccaaaac
     1501 cttgcaaatg ccaaagataa agcaaatgcg tttgttaatt cgttaaatgg attaaatcaa
     1561 cagcaacaag atcttgcaca taaagcaatt aacaatgccg atactgtatc agatgtaaca
     1621 gatattgtta ataatcaaat tgacttaaat gatgcaatgg aaacattgaa acatttagtt
     1681 gacaatgaaa ttccaaatgc agagcaaact gtcaattacc aaaacgctga cgataatgct
     1741 aaaacaaact tcgatgatgc caaacgtcta gcaaatacat tgctaaatag tgataacaca
     1801 aatgtgaatg atatcaatgg cgcaatccaa gcagtcaatg atgcaatcca taatcttaat
     1861 ggtgatcaac gactacaaga tgctaaagac aaggcaattc aatctattaa tcaagcttta
     1921 gctaataagc taaaagaaat cgaagcttca aatgcgacgg atcaagacaa gcttattgcg
     1981 aaaaataaag cagaagaatt ggcaaacagc atcatcaaca acattaataa agcaacaagt
     2041 aatcaggctg tatctcaagt tcaaacagca ggcaaccacg cgattgaaca agtgcatgcc
     2101 aatgaaatac caaaagcaaa aattgatgcc aataaagacg ttgataagca agttcaagca
     2161 ttaattgacg aaattgatcg aaatccaaat ctaacagata aggaaaaaca agcacttaaa
     2221 gatcgtatta atcaaatact tcaacaaggt cataacggca ttaacaatgc gatgactaaa
     2281 gaagaaattg aacaagccaa agcacaactt gcgcaagcat tacaagacat caaagattta
     2341 gtgaaagcta aagaagatgc gaaacaagat gttgataaac aagttcaagc tttaattgac
     2401 gaaatcgatc aaaatccaaa tctaacagat aaggaaaaac aagcacttaa agatcgtatt
     2461 aatcaaatac ttcaacaagg tcataacgac attaacaatg cgatgacaaa agaagcaatt
     2521 gaacaagcaa aagaacgttt agcgcaagca ttgcaagaca tcaaagattt agtgaaagct
     2581 aaagaagatg cgaaaaatga tattgataaa cgtgtacaag ctttaattga cgaaatcgat
     2641 caaaatccaa atctaacaga taaggaaaaa caagcactta aagatcgaat taatcaaata
     2701 cttcaacaag gtcataacga cattaacaat gcgctgacta aagaagaaat tgagcaggca
     2761 aaagcacaac ttgcacaagc attgcaagac atcaaagatt tagtgaaagc taaagaagat
     2821 gcgaaaaatg caataaaagc cttagctaat gcgaagcgtg atcaaatcaa ttcaaatcca
     2881 gatttaacac ctgagcaaaa agcaaaagcg ctcaaagaaa ttgacgaagc tgaaaaacga
     2941 gcactacaaa acgttgagaa tgctcaaact atagatcaat taaatcgagg attaaactta
     3001 ggtttagatg acattagaaa tacacatgta tgggaggttg atgaacaacc tgctgtaaat
     3061 gaaatttttg aagcaacacc tgagcaaatc ctagttaatg gtgaactcat tgtacatcgt
     3121 gatgacatca ttacagaaca agatattctt gcacacataa acttaattga tcagctttca
     3181 gcagaagtca tcgatacacc atcaactgca acgatttctg atagcttaac agcaaaagtt
     3241 gaagttacat tgcttgatgg atcaaaagtg attgttaatg ttcctgtaaa agttgtagaa
     3301 aaagaattgt cagtagtcaa acaacaggca attgaatcaa tcgaaaatgc ggcacaacaa
     3361 aagattaatg aaatcaataa tagtgtgaca ttaacactgg aacaaaaaga agctgcaatt
     3421 gcagaagtta ataagcttaa acaacaagca attgatcatg ttaacaatgc atctgatgtt
     3481 cattcagttg aagaaattca acaacaagaa caagcgcata ttgaacaatt taatccagaa
     3541 caatttacga ttgaacaagc aaaatcaaat acaattaaat cgattgaaga tgcaattcaa
     3601 catatgattg atgaaatcaa agctcgtact gatctaacag ataaagagaa gcaagaagct
     3661 attgctaagt taaatcaatt aaaagaacaa gcaattcaag cgattcaacg tgcgcaaagc
     3721 atcgatgaaa taagtgagca attggaacaa tttaaagctc aaatgaaagc agctaatcca
     3781 acagcaaaag aactagctaa acgcaagcaa gaagctatta gtagaattaa agacttttca
     3841 aatgaaaaaa taaatagtat tcgaaatagt gaaattggca cagctgatga aaaacaagca
     3901 gcaatgaatc aaattaacga aattgtgctt gaaacaatta gagatattaa taatgcgcat
     3961 acattacagc aagttgaggc tgcattgaac aatggtattg ctcgaatttc agcagtacaa
     4021 attgtaacat ctgatcgtgc taaacaatcg tcaagtactg gaaatgaatc taatagccat
     4081 ttaacaattg gttatggaac tgcaaatcat ccatttaaca gttcgactat tggacataaa
     4141 aagaaacttg atgaagatga tgacattgat ccacttcata tgcgtcactt tagtaataat
     4201 ttcggtaatg ttattaaaaa cgctattggt gtggtgggta tctctggttt actagctagt
     4261 ttctggttct tcattgccaa acgtcgtcgt aaagaagatg aagaagatgt ggaagttaca
     4321 aatgaaaaca cagatgaaaa agtgttgaaa gataacgaac attcaccact cttattcgca
     4381 aaacgacgca aagataaaga ggaagatgtt gaaacaacaa ctagtattga atctaaagat
     4441 gaggacgttc ctttattatt ggctaaaaag aaaaatcaaa aagataacca atccaaagac
     4501 aaaaagtcag catcaaaaaa tacttctaaa aaggtagcag ctaaaaagaa gaaaaagaaa
     4561 gctaagaaaa ataaaaaata atttgtttct ttgataaata gaggagcacc gattgacatc
     4621 acatcagtcg gtgctccttt tatttattct ttttaattaa tttatacaat gcctgttgag
     4681 cgtgttgatt cgcttctttg ttttgttctc tcggtatcca tttaacaaat aataaatcaa
     4741 aatctttttc aaatatttct atttgatcaa aataaggttt gaaatttgcg tttttcacat
     4801 aaccagcttc aatgctatct gcaattagct ttgagtctgt atataatagt gcgttttgaa
     4861 catttaattc acgtgcatgt tctagtgcat aaatacatgc agcccattct gcagtgtggt
     4921 tatccatttc gcctaactca tgtgtatatg tataatgctg ctcatcttct ttgattacaa
     4981 tggcacatgt acttatgcct ggatttcctt tcgtcgcagc atcaaaattt attttcgcca
     5041 taataaacct actttctatt caatacttag ttaaagttac tattactgta atacaaaata
     5101 tgttgggtaa tccattaaaa aacacgcatc acttaaataa gtaacacgtg tttaaaatac
     5161 tcgctgattc aaagatgatt ttctaatacg tagtactgta atatacttcc taaaaaaatc
     5221 atcttcaggc tgggacataa atcaatgttc tatgctctac gatgttatat tggcagtagt
     5281 tgactgaacg aaaatgcgct tgtaacaagc ttttttcaat tctagtcagg ggccccaaca
     5341 cagagaattt cgaaaagaaa ttctacaggc aatgcgagtt ggggtgtggg tcccaacaca
     5401 gaagatgacg aaaagtcagc ttacaataat gtgcaagttt gggatgggcc ccaacaaaga
     5461 gaaattggat tcccaatttc tacagacaat gcaagttggg gtgggacgac gaaataaatt
     5521 ttgcgaaaat attatttctg tcccactccc ttaaaactta ttcttttgtg tagtaagtgc
     5581 gttaatagcc ttgatctaac ttatcaatct tacctttacg ataaaatgat ttagcaatat
     5641 atccaaatgg tacattgaaa actgttgaag ctaattttaa tacgtacgtt gtaataaata
     5701 tttcaaatac aactgtacca ggtaaacttc cgataaatgc gatagctaca aataaagctg
     5761 tatcaattat tgagcttaaa aatgtactac catatgcacg gatgaaaaac gttttatcag
     5821 aactaaatac ttttttaatt agtgaaaaga taaatacatc aatatgttga ccaataatat
     5881 atgcgacgat tgagcctaaa gcaatgcgtg gcacaacatc aaagattgcg tgtaatgctt
     5941 tttgtgccat atcttctggt gcaggaataa aatgtaatga caattgcata acaataatca
     6001 taattaatgt tgatgaaaag cctaaccaaa ctgctctttt tgcaactcta cgcccataaa
     6061 tatcgtttaa tatatctgtt gctaaataaa tagaagcaaa catgacatta cctaaagttg
     6121 ctgaaatacc aaagatttct acagttttaa tcacttgtat gttggcaatg attgtgccaa
     6181 ttgcaaccca tgcaattaaa ccttgtttac caaaaaagcg atacataagt accataagca
     6241 cgaacgttgc aataaacgta actagtccta aaatttcatt atacatatta aaatgtcctc
     6301 ctaaattttg atcatgcggg tgtttagaaa ccgctcaata aataactaac tcattttact
     6361 gaaaaatcgt ttgcgatgca atagcatttg aatataaata cattttacgt atagaattgt
     6421 aaaaggtttc attcaaatct tagggtcaaa aatgttataa tatttttatg tcaaatttaa
     6481 aacagtaaca cttatttaca aggttgcaat attttgaagt aataaaggaa gtgtcgcgta
     6541 ttttaacttt ttcagagcaa aatgcactcg cgaaaataga tgatttaatg aatacttatt
     6601 gcaatcaatg tccaatcaaa actcgtctgc gtaaattaga ggggaaaacg aaggcgcatc
     6661 atttttgtat caatgagtgt tcaataggga aagaaataaa acaattagga aatgaacttc
     6721 aataggagga agtcaaatga aaattatatc tatatcagaa acaccgaacc acaacacaat
     6781 gaagattaca cttagtgaaa gcagagaagg tatgacatca gatacgtata ctaaagttga
     6841 tgattcacag ccagcattta ttaatgacat cttaaaggtt gaaggcgtta aatcaatttt
     6901 ccatgttatg gactttattt cagtagataa agaaaatgac gcaaattggg aaacagtatt
     6961 gccaaaagta gaggctgtat tcgaataaat ttttcatcaa ctagtattcg gggggaataa
     7021 agtatatgga aattttacgt atagagccaa caccaagtcc aaatacaatg aaagttgttt
     7081 tgtcatatac aagagaagac aagttatcta atacttataa aaaagtagaa gaaacacaac
     7141 caagatttat aaatcagttg ttatctatag atggtatcac ttccattttt catgtcatga
     7201 acttcttagc tgttgataag gcaccaaaag ctgattggga agtcatatta cctgatatta
     7261 aagctgcttt ttctgatgcg aataaggttt tagaatctgt aaatgaacct caaattgaca
     7321 atcattttgg tgaaattaaa gctgaattat taacttttaa gggtataccg tatcaaatta
     7381 agctaacttc tgctgaccaa gaattaagag aacaattacc acaaacatat gttgaccata
     7441 tgactcaagc gcaaacagca catgacaata ttgtttttat gcgtaaatgg ctagatttag
     7501 gaaatcgcta tggaaatatt caagaagtaa tggatggtgt cctagaagaa gtgctagcta
     7561 cctatccaga atcacagtta cccgtattgg taaaacatgc tttagaagaa aatcacgcaa
     7621 ctaataatta tcatttctat cgacatgtct ctttggatga atatcatgca actgataatt
     7681 ggaagactcg attacgaatg ttaaaccatt ttccaaagcc gacttttgaa gatataccgc
     7741 tgcttgattt agctttatct gatgaaaaag taccggttag acgtcaagcg attgtattat
     7801 taggtatgat tgaaagtaaa gaaattttac cgtatttata taaggggctt cgtgataaaa
     7861 gtcctgctgt aagaagaaca gcaggggatt gcataagcga tttagggtat ccagaggcac
     7921 taccagaaat ggtgctacta ttagatgatc cacagaaaat cgttaggtgg cgtgctgcta
     7981 tgtttatctt tgatgaaggt aatgcagagc agcttcccgc actaaaagcc catattaatg
     8041 acaatgcgtt tgaagttaaa ttacaaattg aaatggccat atctcgtatt gaaaacggag
     8101 atgaagcact tggttcagta tggaaacaaa tggcaaacag aacaatttaa ttggaggaat
     8161 taaatatgaa tgcatatgat gcttatatga aagaaattgc gcaacaaatg cgtggcgaat
     8221 taactcaaaa tggttttaca agtttagaaa cgagcgaagc agtatcggag tatatgaacc
     8281 aagtaaatgc tgatgacact acttttgtag ttattaactc tacatgcggc tgtgcagctg
     8341 gattagcaag accagctgca gtagcagttg caacacaaaa tgaacataga cctacaaata
     8401 cagttacagt ttttgctggg caagataaag aagcaactgc tacaatgcga gaattcattc
     8461 agcaagcacc atctagtcct tcgtatgctt tattcaaagg tcaagattta gtttatttta
     8521 tgcctagaga atttatcgaa ggtagagata ttaatgacat tgcaatggac ttaaaggatg
     8581 cctttgacga aaattgtaaa tagtacacat aaataaatat aaaggttaac acattttata
     8641 atattaaaaa tggtgtctgt cattgaaaat agagaatata gttgtattct atttgttaaa
     8701 taaagtccgt ttttaccaac tatattttct agaaatttaa ctgttttaat aggacatcaa
     8761 acataatatt caaatcatgt gttaacctct tttttaaaat tttttagcat taaagttata
     8821 gatttgggta aacaattacc aattggaaac atatatcacg ttacgatggg gtaggtactt
     8881 aatcagcatt ttataaataa agtaacggaa ttcatgatat taatatcata ttcctaaaat
     8941 gagtgataac aaaatgctac ataaagttaa gttatatcaa actaaatata catactataa
     9001 ataatgaaaa tgaggtgtta tcgcatatgt tgaattcatt tgatgcagca tatcacagtc
     9061 tttgtgaaga agttttagaa ataggaaata cacgaaatga tcgcacaaat acaggtacga
     9121 tttcgaaatt tggtcatcaa cttcgctttg acttatctaa aggatttcca ctattaacga
     9181 caaagaaagt ttcttttaaa ttagtagcaa ccgaattatt atggttcatt aaaggagata
     9241 caaacatcca atacttatta aaatataata ataatatatg gaacgaatgg gcttttgaaa
     9301 attatatcaa atcagacgag tataaaggtc cagatatgac agatttcggg catcgtgcat
     9361 tgagtgatcc tgaatttaac gaacaatata aagaacaaat gaaacaattt aagcaacgta
     9421 ttcttgaaga tgatacattt gcgaagcaat tcggggattt aggaaatgtt tatggtaaac
     9481 aatggcgaga ttgggttgat aaagatggta atcattttga tcaacttaaa acagtaattg
     9541 aacaaattaa gcataatcca gattcaaggc gacacatcgt atctgcatgg aatccaacag
     9601 aaattgatac aatggcactt ccgccttgtc ataccatgtt ccagttttat gtccaagatg
     9661 gtaagttaag ttgccagtta taccaacgta gcgcagatat ctttttaggt gtgccattta
     9721 atatcgcaag ctacgcttta ttgacacacc ttattgccaa agaatgtgga cttgaagtgg
     9781 gtgaatttgt gcatacattt ggagatgcac atatttattc aaatcatatt gatgcgattc
     9841 aaacacaatt agcacgtgaa agcttcaatc ctccaacatt aaaaattaac agtgacaagt
     9901 ctattttcga cataaattat gaagatttgg aaattgttga ctatgaatca catccagcaa
     9961 taaaagctcc aatagcagtg tagtcattgc atagttagct aaccatatag acatcaaaat
    10021 gacatcatag tattttcaag tgcaaaaaag tacttttttg tgttaaacgt tttcataaat
    10081 tatgcaaaat cattatttct atcacacttt atgataaaaa ttgtgttaaa ttaaagataa
    10141 cttagtaata aaaaatgaaa tgatagaaga aggaggataa ttatgacttt atccattcta
    10201 gttgcacatg acttgcaacg agtaattggt tttgaaaatc aattaccttg gcacctacca
    10261 aatgatttga agcatgttaa aaaattatca acaggtcata ctttagtaat gggtcgtaag
    10321 acatttgaat cgattggtaa accactaccg aatcgtcgaa atgttgtact tacttcagat
    10381 acaagtttca acgtagaggg cgttgatgta attcactcta ttgaagatat ttaccaacta
    10441 ccgggccatg ttttcatatt tggagggcaa acattatttg aagaaatgat tgataaagtg
    10501 gacgacatgt atattactgt tattgaaggt aaattccgtg gtgatacgtt ctttccacct
    10561 tatacatttg aagactggga agttgcctct tcagttgaag gtaaactaga tgagaaaaat
    10621 acaattccac atacctttct acatttaatt cgtaaaaaat aagggggaaa acgaccatga
    10681 caaaacagat tatagtaaca gactcaacat ccgatttatc taaagaatac ttagaagcaa
    10741 acaacattca tgtaattcct ttaagtttaa ctattgaagg agcttcatac gttgaccaag
    10801 tagatattac atcagaagaa tttattaatc atattgaaaa tgatgaagat gtaaagacaa
    10861 gtcagccagc cataggtgaa tttatatctg cttatgaaga actaggaaaa gatggctctg
    10921 aaatcataag tattcatctt tcttcaggat taagtggtac atataacact gcttaccaag
    10981 caagtcaaat ggtagatgct aatgtaactg ttattgattc aaaatctatt tcttttggtt
    11041 tagggtatca aatacaacac ctagtagagc ttgtaaaaga aggtgtctca acttctgaaa
    11101 tagttaaaaa gttaaatcat ttaagagaaa acattaaatt atttgtagtt atagggcaat
    11161 tgaatcaatt aattaaaggt ggcagaatta gtaaaacaaa aggtttgatt ggtaatctta
    11221 tgaaaattaa accaattggt acactagatg atggtcgctt agagcttgtg cacaatgcga
    11281 gaactcaaaa ttctagtatc caatacttga aaaaggaaat tgctgaattt ataggagatc
    11341 atgaaatcaa atccattggt gtcgcacatg ctaacgtcat tgaatatgtt gataaattga
    11401 agaaagtttt taatgaagct tttcatgtga ataattacga tataaatgta actacaccag
    11461 ttatttctgc acatactggt caaggtgcga ttggcctcgt agtccttaag aagtaaattt
    11521 aatcttttca gtgttaatta cttccatttc aatcctttat agactaaatt tataattaga
    11581 tagatagagg aggtaattca tatgacaaaa gaatatgcaa cattagcagg aggatgtttc
    11641 tggtgcatgg ttaaaccatt tacatcatat ccaggcatca agtcagtcgt atctggttat
    11701 agtggcggtc atgttgacaa cccaacttat gaacaggtat gtacgaatca aaccggccat
    11761 gtcgaagcag tacaaattac gtttgatcca gaggttactt cctttgaaaa tatattagac
    11821 atatatttca aaacatttga cccaactgat gatcaagggc aatttttcga tagaggcgaa
    11881 agctatcaac cagtcatttt ctatcatgat gaacatcaga aaaaggctgc tgagtttaaa
    11941 aagcaacaat taaatgaaca aggtattttc aagaaaccag tgattacacc tattaaacca
    12001 tataaaaatt tctatccagc tgaagactac catcaagatt attacaaaaa gaacccggta
    12061 cattattacc aatatcaacg tggttcaggt agaaaagcgt ttatagaatc acattggggg
    12121 aatcaaaatg cttaaaaaag ataaaagtga actaacagat atagaatata ttgttacaca
    12181 agaaaacggc actgaaccac catttatgaa tgaatattgg aatcattttg ctaaaggaat
    12241 ttatgtagat aaaatttctg gtaaaccttt atttacatct gaagaaaagt ttcattctga
    12301 atgtggatgg cctagctttt ccaaagcgct tgatgacgat gaaattatag aattagtcga
    12361 caaatcattt ggtatgttga gaactgaagt gcgttcagaa gaatcaaata gtcatttagg
    12421 acatgtcttt aatgatggac ctaaagaaag tggcggctta agatactgta tcaattccgc
    12481 tgcaattcaa tttattccat atgaaaagtt agaagaattg ggttatggcg atttaatatc
    12541 acattttgat aagtaggagt ggaaagtatg tttaaaaaat tattcggaaa aggcaaagaa
    12601 gttcagaaag atatcgcaat ttatgcacca ttaactggag aattcgtgaa aattgaagat
    12661 attccagatc ctgtattcgc acaaaaaatg atgggcgaag gttttggtat taatccaact
    12721 gaaggagaag ttgtgtctcc aattgcagga cgtgttgaca atgtctttcc aactaagcat
    12781 gcgattgggt taaaagcaga taacggatta gaattattag ttcatatcgg tttagacaca
    12841 gttcaattag acggtgaagg atttgaagtg ttagtgtcta gtggtgacga agttaacgtc
    12901 ggagatccat tagtaagatt caaccttgaa tatattaata ataacgctaa atctgtaatt
    12961 tcaccaatta taattactaa cactgatcaa gcagcttcaa ttaatattta tgatgaaaat
    13021 gctgtgatta aaggtgaaac aaaagtgatt gatgtgacaa tgaactaatg aaaaactatt
    13081 cgttttatca atttgtcatg acagttcgtg gtcgacacga cgataaaggt cgtctagcag
    13141 aagagatatt tgacgatctt gctttcccaa aacacgatga tgattttaac atactgtctg
    13201 attatattga gacacatggt gatttcacat tgccaatgtc tgtatttgat gatttatatg
    13261 aagaatatac ggaatggcta aaattttaat ataattttta ataataatag ttagaaccag
    13321 ggtgatgcaa ttcgttatcc tggttttaat ttaaaataaa ctaagttgtg actaaaaatt
    13381 aatcaattat agtgaaatat ggtgcgctat cttgcataaa ttgatatgat taactacaca
    13441 gaatttaaaa gtacataata cataataagg aagtgataca atggatgata agcaacacac
    13501 atcttcatcc gatgatgaac gcgctgaaat tgcaacaagc aatcaagacc aagaaactaa
    13561 ttcatcgaaa cgcgttcact taaaacgttg gcaattcata tcaatattaa ttggtacaat
    13621 cctaataaca gctgtcatca cagttgttgc atatattttt ataaatcaaa aaataagtgg
    13681 tttaaacaaa actgatcaag caaacttaaa taaaattgaa aatgtgtata aaatcttaaa
    13741 tagtgattat tacaaaaaac aggactctga caagttaagt aaagctgcaa ttgatggcat
    13801 ggtcaaagaa ttaaaagatc cttattctga atatttaaca aaagaacaaa cgaaatcctt
    13861 taatgaaggt gtttcaggtg attttgtagg tattggtgca gaaatgcaaa agaaaaatga
    13921 tcaaattatg gttactagtc ctatgaaggg atctccagca gaacgtgctg gcattcgtcc
    13981 taaagatgtc attactaaag taaatggaaa atcaattaaa ggtaaagcat tagatgaagt
    14041 tgtcaaagat gttcgtggta aagaaaacac tgaagtcact ttaactgttc aacgaggtag
    14101 tgaagaaaaa gacgttaaga ttaaacgtga aaaaattcat gttaaaagtg ttgagtataa
    14161 gaaaaaaggt aaagttggag ttattactat taataaattc cagaatgata catcaggtga
    14221 attgaaagat gcagttctaa aagctcacaa agatggtttg aaaaagattg ttttagattt
    14281 aagaaataat ccaggtggac tactagatga agctgttaaa atggcaaata tttttatcga
    14341 taaaggaaaa actgttgtta aactagaaaa aggtaaagat actgaagcaa ttcaaacttc
    14401 taatgatgcg ttaaaagaag cgaaagacat ggatatatcc atcttagtga atgaaggttc
    14461 agctagcgct tctgaagtgt ttactggtgc gctaaaagac tataataaag ctaaagttta
    14521 tgggtcaaaa acattcggca aaggtgtcgt acaaactaca agagagttta aggatggttc
    14581 attgttaaaa tatactgaaa tgaaatggtt aacgccagat ggtcattata ttcacggtaa
    14641 aggcattaaa ccagacgtta ctattgacac acctaaatat caatctttaa atgtcattcc
    14701 taatacgaaa acatttaaag ttggagacga tgataaaaat attaaaacta ttaaaattgg
    14761 tttatcagct ttaggttata aagttgataa tgaatcaacg caatttgata aagctttaga
    14821 aaatcaagtt aaagctttcc aacaagcgaa taaacttgag gtaactggtg aatttaataa
    14881 agaaacgaat aataaattta ctgagttatt agttgaaaaa gctaataaac atgatgatgt
    14941 tctcgataag ttgattaata ttttaaaata agcgatacac actactaaaa ttgtattatt
    15001 attatgttaa tgacacgcct cctaaatttg caaagatagc aatttaggag gcgtgtttat
    15061 ttttattgac gtctaactct aaaagatata aattagacat ttacaaatga tgtaaataac
    15121 gcaatttcta tcatcgctga taacaattca tggtttaata tgcaatgagc atatactttt
    15181 taaatagtat tattcactag ttttaacaat caattaattg gtatatgata cttttattgg
    15241 ttatttttat cccatagtgt gataattact atttttcatt cataataaag gtttaaagca
    15301 tgttaatagt gtgtaagatt aacatgtact gaaaaacatg tttaacataa tgatataagg
    15361 agtgacgtac atgatccgtc taggtaaaat gtcagattta gatcaaatct taaatctagt
    15421 agaagaagca aaagaattaa tgaaagaaca cgacaacgag caatgggacg atcagtaccc
    15481 acttttagaa cattttgaag aagatattgc taaagattat ttgtacgtat tagaggaaaa
    15541 tgacaaaatt tatggcttta ttgttgtcga ccaagaccaa gcagaatggt atgatgacat
    15601 tgactggcca gtaaatagag aaggcgcctt tgttattcat cgattaactg gttcgaaaga
    15661 atataaagga gctgctacag aattattcaa ttatgttatt gatgtagtta aagcacgtgg
    15721 tgcagaagtt attttaacgg acacctttgc gttaaacaaa cctgcacaag gtttatttgc
    15781 caaatttgga tttcataagg tcggtgaaca attaatggaa tatccgccat atgataaagg
    15841 tgaaccattt tatgcatatt ataaaaattt aaaagaatag aggtaatatt aatgacgaaa
    15901 atcgcattta ccggaggggg aacagttgga cacgtatcag taaatttaag tttaattcca
    15961 actgcattat cacaaggtta tgaagcgctt tatattggtt ctaaaaatgg tattgaaaga
    16021 gaaatgattg aatcacaact accagaaatt aagtattatc ctatttcgag tggtaaatta
    16081 agaagatata tttctttaga aaatgccaaa gacgtattta aagtattgaa aggtattctt
    16141 gatgctcgta aagttttgaa aaaagaaaaa cctgatctat tattttcaaa aggtggattt
    16201 gtatctgtgc ctgttgttat tgcagccaaa tcattaaata taccaactat tattcatgaa
    16261 tctgacttaa caccaggatt agcgaataag atagcactta aatttgccaa gaaaatatat
    16321 acaacatttg aagaaacgct aaactactta cctaaagaga aagctgattt tattggagca
    16381 acaattcgag aagatttaaa aaatggtaat gcacataatg gttatcaatt aacaggcttt
    16441 aatgaaaata aaaaagtttt actcgttatg ggtggaagct taggaagtaa aaaattaaat
    16501 agcattattc gcgaaaactt agatgcatta ttacaacaat atcaagtgat acatttaact
    16561 ggtaaaggat taaaagatgc tcaagttaaa aaatcaggat atatacaata tgaatttgtt
    16621 aaagaggatt taacagattt attagcaatt acggatacag taataagtag agctggatca
    16681 aatgcgattt atgagttctt aacattacgt ataccaatgt tattagtacc attaggttta
    16741 gatcaatccc gaggcgacca aattgacaat gcaaatcatt ttgctgataa aggatatgct
    16801 aaagcgattg atgaagaaca attaacagca caaattttat tacaagaact aaatgaaatg
    16861 gaacaggaaa gaactcgaat tatcaataat atgaaatcgt atgaacaaag ttatacgaaa
    16921 gaagctttat ttgataagat gattaaagac gcattgaatt aatggggggt aatgctttat
    16981 gagtcaatgg aaacgtatct ctttgctcat cgtttttaca ttggtttttg gaattatcgc
    17041 gtttttccac gaatcaagac ttgggaaatg gattgataat gaagtttatg agtttgtata
    17101 ttcatcagag agctttatta cgacatctat catgcttggg gctactaaag taggtgaagt
    17161 ctgggcaatg ttatgtattt cattacttct tgtggcatat ctcatgttaa agcgccacaa
    17221 aattgaagca ttattttttg cattaacaat ggcattatct ggaattttga atccagcatt
    17281 aaaaaatata ttcgatagag aaagacctac attgctgcgt ttaattgata taacaggatt
    17341 tagttttcct agcggtcatg ctatgggatc aactgcatat tttggaagtg gtatctatct
    17401 attaaatcga ttaaatcaag gtaattcaaa aggtattctt atagggttat gtgcagctat
    17461 gattttattg atttccatat cacgtgtata tctaggtgta cattatccaa cagatattat
    17521 tgccggcatt attggtggat tattttgcat tattttatca acgttattac ttagaaataa
    17581 attaataaat taaatagtaa aaaaacaaaa gcagtaaacc taaagtgtcg taagggttta
    17641 ctgcttttat aaaacgttgt tataacgtat attgtctttt acgggcatat aaaaggggaa
    17701 tatttgaaaa tgaccaatcc aacaagaacg aaacgttgtg ggggggatgt tctatgtggt
    17761 attgataatc attttcaact actattatac attagtgaga atcattgtca attagaaact
    17821 aaaacttttt ttgaatattt tttaagaata gtaaataaaa cgcatgatta cgctatttta
    17881 gaaaa
//
LOCUS       DALPQQ010000048        17417 bp    DNA     linear   BCT 22-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus strain K18-6-464
            SAMD00233528-rid16434743.denovo.048, whole genome shotgun sequence.
ACCESSION   DALPQQ010000048 DALPQQ010000000
VERSION     DALPQQ010000048.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMD00233528
            Sequence Read Archive: DRR236061
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 17417)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 17417)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001543423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001543423.1
            Genome Coverage       :: 77x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/22/2022 17:09:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,811
            CDSs (total)                      :: 2,743
            Genes (coding)                    :: 2,689
            CDSs (with protein)               :: 2,689
            Genes (RNA)                       :: 68
            rRNAs                             :: 2, 4, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 4, 2 (16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 54
            CDSs (without protein)            :: 54
            Pseudo Genes (ambiguous residues) :: 0 of 54
            Pseudo Genes (frameshifted)       :: 27 of 54
            Pseudo Genes (incomplete)         :: 27 of 54
            Pseudo Genes (internal stop)      :: 10 of 54
            Pseudo Genes (multiple problems)  :: 10 of 54
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..17417
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMD00233528-rid16434743.denovo.048"
                     /strain="K18-6-464"
                     /db_xref="taxon:1280"
                     /geo_loc_name="Japan: Niigata"
     gene            <1..402
                     /gene="tsaE"
                     /locus_tag="O7798_001326"
     CDS             <1..402
                     /gene="tsaE"
                     /locus_tag="O7798_001326"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000590797.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA
                     (adenosine(37)-N6)-threonylcarbamoyltransferase complex
                     ATPase subunit type 1 TsaE"
                     /protein_id="HDC2863592.1"
                     /translation="LKSGDLILLNGDLGAGKTTLTQFIGKALGVRRTINSPTFNIIKS
                     YRGKNLKLHHMDCYRLEDSDEDLGFDEFFEDQAITVIEWSQFIKDLLPATHLSINIST
                     ISENTRQIELFAQGEHYEQIKEAIIHEFAAH"
     gene            383..1045
                     /gene="tsaB"
                     /locus_tag="O7798_001327"
     CDS             383..1045
                     /gene="tsaB"
                     /locus_tag="O7798_001327"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500760.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA
                     (adenosine(37)-N6)-threonylcarbamoyltransferase complex
                     dimerization subunit type 1 TsaB"
                     /protein_id="HDC2863593.1"
                     /translation="MNSLLIDTSNQPLSVALMQNDEVLAEITTDSKQNHSVQLMPAIS
                     QLFEQSKIAKQQLDAIIVAEGPGSYTGLRIGVTVAKTLAYALDVKLYGVSSLKALAAT
                     IDHTDKLLVPVFDARRQAVYTGIFQWQNGQLVTILEDQYMSIEALRAFLEDLNQPFIY
                     IGKDTVKLQDELQGEVIAQLPNASVMYQLLDKPSDVHTFTPKYHKLAEAERNWINSQK
                     NN"
     gene            1018..1482
                     /gene="rimI"
                     /locus_tag="O7798_001328"
     CDS             1018..1482
                     /gene="rimI"
                     /locus_tag="O7798_001328"
                     /EC_number="2.3.1.266"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001611465.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosomal protein S18-alanine
                     N-acetyltransferase"
                     /protein_id="HDC2863594.1"
                     /translation="MDQQSKEQLNIREMTKEDVPQVFDLERRSFNDSSWTIDAFYHEI
                     EQNNFAKYFVLEFEQQIIGYLGLWIVIDQAQITTVAIDDNYRGYGLGQMLLKYGINYA
                     SHTCDVMSLEVRVNNKVAQHVYENLGFQYGGKRKNYYGEGEDAMVMWVNLND"
     gene            1475..2500
                     /gene="tsaD"
                     /locus_tag="O7798_001329"
     CDS             1475..2500
                     /gene="tsaD"
                     /locus_tag="O7798_001329"
                     /EC_number="2.3.1.234"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500758.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA
                     (adenosine(37)-N6)-threonylcarbamoyltransferase complex
                     transferase subunit TsaD"
                     /protein_id="HDC2863595.1"
                     /translation="MTKDILILAVETSCDETSVSVIKNGRDILSNTVLSQIESHKRFG
                     GVVPEVASRHHVEGITATINEALGDADVSIEDIDAIAVTEGPGLIGALLIGVNAAKAL
                     AFAYDKPLIPVHHIAGHIYANHIEEPLTFPLIALIVSGGHTELVYMKDHLSFEVIGET
                     RDDAVGEAYDKVARTIGLNYPGGPQVDRLAAEGEDTYSFPRVWLDKDSYDFSFSGLKS
                     AVINQLHNQRQKNIPIIEANVATSFQNSVVEVLTFKAIQACKEYGVQRLIVAGGVASN
                     KGLRQSLADQCKVNDIQLTIPSPKLCTDNAAMIGVAGHYLYQQGRFADLALNGHSNID
                     LEEYSAE"
     gene            complement(2602..4212)
                     /locus_tag="O7798_001330"
     CDS             complement(2602..4212)
                     /locus_tag="O7798_001330"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500757.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MutS family DNA mismatch repair protein"
                     /protein_id="HDC2863596.1"
                     /translation="MSTNQTFLIFVIAIILLTSVIGIVGRYMSRQRLLKSMETLWQTI
                     SPLEAFIRPNSHFDYEYKLYKEKFESHSLVDDKTWSDLNMNAIFHKMNYNLTAIGEMK
                     LYACLRGMLSITNKSLLSLFNDNAEFRKNVTYHLALIGKTVYPTFPDQITPVKRQNIL
                     FLCPFLPVISFAVIFINSQVGILLFLMSCLFNIILSATLKRTYEDDLKSIFYASNVLK
                     QGYTISKIKHAPQPEVNFKQFRTARHLTSVLAEVNDEDIGAMVIKLVKLIFMLDYVLF
                     HSIQKSYTTHMNELKNCFDYIAELDNHYALAMYRRTLECYTEPQIDDSNDGIVFSELT
                     HPLIADAVANDFSLSQNILLTGSNASGKSTFMKSIAINIILASAIQTVTASKFVYQPG
                     IVFTSMANADDVLSGDSYFMAELKSIKRIVEIPDNQKIYCFIDEIFKGTNTTERIAAS
                     ESVLSFLHEKSNFRVIAATHDIELAELLKQRYENYHFNEVIENNNIHFDYKIKPGKAN
                     TRNAIELLKITSFPAKIYERAKDNVPKI"
     gene            4301..4429
                     /locus_tag="O7798_001331"
     CDS             4301..4429
                     /locus_tag="O7798_001331"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500756.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDC2863597.1"
                     /translation="MIKTMSIENMRTYQQRVNNLWIKGVDNVIYCGYQVGKQKIND"
     gene            complement(4574..6502)
                     /gene="abc-f"
                     /locus_tag="O7798_001332"
     CDS             complement(4574..6502)
                     /gene="abc-f"
                     /locus_tag="O7798_001332"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500755.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC-F type ribosomal protection protein"
                     /protein_id="HDC2863598.1"
                     /translation="MILLQLNHISKSFDGEDIFTDVDFEVKTGERIGIVGRNGAGKST
                     LMKIIAGVENYDSGNVSKIKNLKLGYLTQQMTLNSNATVFEEMSKPFEHIKRMESLIK
                     EETDWLSKHANDYDSDTYKTHMSRYESLSNQFEQLEGYQYESKIKTVLYGLNFSEEDF
                     NKPINDFSGGQKTRLSLAQMLLNEPDLLLLDEPTNHLDLETTKWLEDYLRYFKGAIVI
                     ISHDRYFLDKIVTQIYDVALGDVKRYVGNYEEFIQQRDLYYQKRMQEYESQQAEIKRL
                     ETFVEKNITRASTSGMAKSRRKILEKMERIDKPMLDAKSANIQFGFDRNTGNDVMHVK
                     NLEIGYQTAITKPMSIEVSKGDHIAIIGPNGIGKSTLIKTIANQQKALNGDITFGANL
                     QIGYYDQKQAEFKSSKTILDYVWDQYPLMNEKDIRAVLGRFLFVQDDVKKIINDLSGG
                     EKARLQLALLMLQRDNVLILDEPTNHLDIDSKEMLEQALQHFEGTILFVSHDRYFINQ
                     LANKVFDLTIDGGKMYLGDYQYYIEKVEEAEALKAHQEEQSVNVQAHKKSMEQSSYHN
                     QKEQRREQRKLERQISECENEIETLETTILQIDEQLTQPEVYNNPQKANELAIQKQDS
                     EQKLEHAMSKWEELQQKL"
     gene            6755..7390
                     /locus_tag="O7798_001333"
     CDS             6755..7390
                     /locus_tag="O7798_001333"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500754.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="redox-sensing transcriptional repressor Rex"
                     /protein_id="HDC2863599.1"
                     /translation="MSDQVKIPRATLKRLPLYYRFVSSLKSKGIDRVNSKAISDALQI
                     DSATIRRDFSYFGELGKKGYGYNIDSLLDFFKSELSESDMIKIAIVGVGNLGKALLTY
                     NFSIHDDMTITEAFDVKEDVIGQKIGNVIVKDNDELITTLKKEEIDVVILTTPERVAQ
                     KVADELVQAGVKGILNFTPGRINTPSDVQVHQIDLGIELQSLLFFMKNYSE"
     gene            7694..8773
                     /locus_tag="O7798_001334"
     CDS             7694..8773
                     /locus_tag="O7798_001334"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000266877.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YeeE/YedE family protein"
                     /protein_id="HDC2863600.1"
                     /translation="MWMIFSGLIVGGLLGFVMQRTRFCLTGGFRDMYVQKNNKMFYAL
                     LIAITIQSIGLLILTATDILQIPAHSFPILGTIIGSFIFGIGIVLAGGCATGTWYRAG
                     EGLIGSWIALVLYAVTAAITKTGILKPVMDKINQPTNVNSDMSQTTGIPFWGLVVILT
                     IITIFLVVRTLNNKKVRVAVPKLKQRYTGIRYYLFEKRYHPFIAAIVIGLIALLAWPM
                     SASTGRNDGLGITTPSANLVHFLITGETKFIDWGVFLVLGIFIGSYIAARGSREFKWR
                     LPDKITIRNSAIGGICMGFGASVAGGCSIGNGLVETATMTWQGWIALASMIVGVWTMS
                     HFIFVRPMKKVHQQSAKVKQQTQIV"
     gene            8833..9057
                     /locus_tag="O7798_001335"
     CDS             8833..9057
                     /locus_tag="O7798_001335"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500752.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfurtransferase TusA family protein"
                     /protein_id="HDC2863601.1"
                     /translation="MIHELGTVGMVCPFPLIEAQKKMATLQSGDELKIDFDCTQATEA
                     IPNWAAENGYPVTNYEQIDNASWTITIQKV"
     gene            9265..10515
                     /locus_tag="O7798_001336"
     CDS             9265..10515
                     /locus_tag="O7798_001336"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500751.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ammonium transporter"
                     /protein_id="HDC2863602.1"
                     /translation="MNLNDTIFMFLCTLLVWLMTPGLSLFYGGLVQSKNALNTVMQSM
                     AAIVLVTFVWITVGFTISFGNGNLWFGNWEYTFLNHVGFATQEDISPHIPFALFMLFQ
                     MMFCTIAISILSGSIAEKMKFIPYLLFVVIWTALVYSPVAHWVWGGGWINKLGVLDFA
                     GGTVVHITSGVSGLVLAIMIGKGNKHSESTPHNLIITLIGGIFVWIGWYGFNVGSAFT
                     FDNIAMLAFTNTVISASAGAIGWLILEYIFKKTTSLLGLLLGALAGLVVITPAAGYVT
                     YLSATIMALIGGICCYIVINYIKVKLKYHDALDAFGIHGVGGIIGAVLTAVFQSKKAN
                     PDIENGFIYTGDIHIILVQILCVTAVVIFSIVMTFIIAKVIKLITPLSVTEQETNIGL
                     DKIVHGEHAYFEGELNRFNKHIRY"
     gene            10698..11648
                     /locus_tag="O7798_001337"
     CDS             10698..11648
                     /locus_tag="O7798_001337"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500750.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LacI family DNA-binding transcriptional
                     regulator"
                     /protein_id="HDC2863603.1"
                     /translation="MKNISDIAKLAGVSKSTVSRFLNNGSVSKKTSEKLTRIIAEHDY
                     QPNQFAQSLRARQTHLIGAIIPRMNSYAVDETIKGLAKQCQKYESQLILNYTGLNIEA
                     EIQALETLARSKVDGIVLMATDITERHIEVINKMNVPIVIVGQQHEQLHSIVHDDYKA
                     GQIIGEWIGQQGYQQVEVFSVSEKDIAVGIHRKRGLLDQLAKYQIKPNIHETNFTYVE
                     AQKDVANVLENVEQVDAVVGATDTIALAAYKYYSDKKDVMKPHQIYGFGGDPMTQLVS
                     PSIKTIHYNYFEAGQCAMEEIQQMLKKQDMPYSVTVDVNI"
     gene            11797..13281
                     /locus_tag="O7798_001338"
     CDS             11797..13281
                     /locus_tag="O7798_001338"
                     /EC_number="3.2.1.26"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500749.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sucrose-6-phosphate hydrolase"
                     /protein_id="HDC2863604.1"
                     /translation="MTEWTREERYQRIEDVDTEYFKTLKQQVDQSKFRQQFHIQPETG
                     LLNDPNGLIFYKGKYYVSHQWFPLGAVHGLKYWYNYTSDDLINFKAEGPILNPDTKYD
                     SHGVYSGSAFEYNGHLYYMYTGNHRDNHWQRHASQMIARLKEDGSVEKFPKPVISQQP
                     EGYTSHFRDPKVFKYDEKYYAIIGAQNNDQQGRLLLYNTEDIINWHYLGEINTELDDF
                     GYMWECPDYFNVDNQDVILICPQGIEPKGDQFKNIYQSGYILGKFDIEKLTYEHENFV
                     ELDNGFDFYAPQTFLDEKGRRVLIGWMGLPEIEYPTDNEGWAHCLTIPRVLNVENGQL
                     KQRPYPALEKLRHNKETALGYANKFTRKLHPYEGKQYELIIDILDNDATEVYFELRTS
                     KTSSTLIAYNKRENKITLDRSDSGLLPTNVEGTTRSTILDTPLKQLQIFVDTSSIEIF
                     CNDGERVLTSRIFPTEDALGIKTSTESGQVYLQFTKYDLKDEHK"
     gene            13278..14237
                     /locus_tag="O7798_001339"
     CDS             13278..14237
                     /locus_tag="O7798_001339"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500748.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbohydrate kinase"
                     /protein_id="HDC2863605.1"
                     /translation="MRRLFSIGEALIDFIPNVTNANLKDVQTFTKQIGGAPCNVACTV
                     QKLGQQAYMITQLGNDAFGDSIIETISSIGVDVSKVYRTNEANTALAFVSLTEAGERD
                     FSFYRKPSADMLFEPSFVNDIDVNENDVVHFCSVDLVDSPMRDAHYQLITKTLNANGT
                     VVFDPNVRLPLWDNAEDLRQTIHTFLPLAHIVKVSDEELEFITGIHDENEAIQSLFTG
                     NVTVVIYTKGADGAAVYLKNGINHYHSGYKVKPVDTTGAGDAFIGAVISRILATDVLN
                     LTQLFENEGEEILAFSNRVAAIVTTKYGAINSLPTLQEVEQAF"
     gene            complement(14425..14532)
                     /locus_tag="O7798_001340"
     CDS             complement(14425..14532)
                     /locus_tag="O7798_001340"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500747.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDC2863606.1"
                     /translation="MHCIAGFLILLTKLNMTRELKNDVTSLCIPIPITT"
     gene            complement(14604..15320)
                     /locus_tag="O7798_001341"
     CDS             complement(14604..15320)
                     /locus_tag="O7798_001341"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000688500.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HDC2863607.1"
                     /translation="MKIFICEDDPKQRENMVTIIKNYIMIEEKPMEIALATDNPYEVL
                     EQAKNMNDIGCYFLDIQLSTDINGIKLGSEIRKHDPVGNIIFVTSHSELTYLTFVYKV
                     AAMDFIFKDDPAELRTRIIDCLETAHTRLQLLSKDNSVETIELKRGSNSVYVQYDDIM
                     FFESSTKSHRLIAHLDNRQIEFYGNLKELSQLDDRFFRCHNSFVVNRHNIESIDSKER
                     IVYFKNKEHCYASVRNVKKI"
     gene            complement(15339..16631)
                     /locus_tag="O7798_001342"
     CDS             complement(15339..16631)
                     /locus_tag="O7798_001342"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001670396.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GHKL domain-containing protein"
                     /protein_id="HDC2863608.1"
                     /translation="MELLNSYNFVLFVLTQMILMFTIPAIISGIKYSKLDYFFIIVIS
                     TLSLFLFKMFDSASLIILTSFIIIMYFVKIKWYSILLIMTSQIILYCANYMYIVIYAY
                     ITKISDSIFVIFPSFFVVYVTISILFSYIINRVLKKISTPYLILNKGFLIVISTILLL
                     TFSLFFFYSQINSDEAKVIRQYSFIFIGITIFLSILTFVISQFLLKEMKYKRNQEEIE
                     TYYEYTLKIEAINNEMRKFRHDYVNILTTLSEYIREDDMPGLRDYFNKNIVPMKDNLQ
                     MNAIKLNGIENLKVREIKGLITAKILRAQEMNIPISIEIPDEVSSINLNMIDLSRSIG
                     IILDNAIEASTEIDDPIIRVAFIESENSVTFIVMNKCADDIPRIHELFQESFSTKGEG
                     RGLGLSTLKEIADNADNVLLDTIIENGFFIQKVEIINN"
     gene            complement(16656..16796)
                     /locus_tag="O7798_001343"
     CDS             complement(16656..16796)
                     /locus_tag="O7798_001343"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500744.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cyclic lactone autoinducer peptide"
                     /protein_id="HDC2863609.1"
                     /translation="MNTLFNLFFDFITGILKNIGNIAAYSTCDFIMDEVEVPKELTQL
                     HE"
     gene            complement(16793..17362)
                     /gene="agrB"
                     /locus_tag="O7798_001344"
     CDS             complement(16793..17362)
                     /gene="agrB"
                     /locus_tag="O7798_001344"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500743.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="accessory gene regulator AgrB"
                     /protein_id="HDC2863610.1"
                     /translation="MNYFDNKIDQFATYLQKRNNLDHIQFLQVRLGMQVLAKNIGKLI
                     VMYTIAYILNIFLFTLITNLTFYLIRRHAHGAHAPSSFWCYVESIILFILLPLVIVNF
                     HINFLIMIILTVISLGVISVYAPAATKKKPIPVRLIKRKKYYAIIVSLTLFIITLIIK
                     EPFAQFIQLGIIIEAITLLPIFFIKEDLK"
BASE COUNT         5959 a         2469 c         3070 g         5919 t
ORIGIN      
        1 ttgaaaagtg gtgatttgat tttacttaac ggagatttag gagcaggtaa aacaacgtta
       61 acgcaattta taggaaaagc tcttggtgta agacgtacga ttaattcccc gacatttaac
      121 atcattaaat catatagggg taaaaattta aaattgcatc atatggattg ttatcgctta
      181 gaagattctg atgaagattt aggatttgat gaatttttcg aagatcaggc aattactgtt
      241 attgaatgga gtcaatttat aaaagattta cttccagcga cgcatttatc tattaacatt
      301 tcaacaatat ctgaaaatac aagacaaatt gagttgttcg cgcaaggaga acattatgaa
      361 caaattaagg aggcaattat ccatgaattc gctgctcatt gatacatcga atcaaccatt
      421 atcagtagca ttgatgcaaa acgatgaagt tttagctgaa ataactacgg attctaaaca
      481 aaatcattca gtgcaattaa tgcctgcgat tagtcagcta tttgagcaga gcaaaatagc
      541 taaacagcaa ttagatgcga ttattgttgc tgaaggtcct ggttcatata ctggcttacg
      601 tatcggtgtt actgttgcta aaacattagc gtatgcgtta gatgttaaat tatatggtgt
      661 ttcatcatta aaggcattgg cagcaacaat cgatcatact gataaattat tggttcctgt
      721 gtttgatgca agacgacaag cagtttatac aggcatattc cagtggcaaa atggtcaatt
      781 agtgactatt ttagaagatc aatatatgtc gatagaggca ttgcgagctt ttttagaaga
      841 tttaaaccaa ccatttattt atattgggaa agatactgta aaattacaag atgaattaca
      901 aggtgaagtg attgcgcagc taccaaatgc atcagtcatg tatcaattgc tagataaacc
      961 ttcagacgta catacattta ctcctaaata ccataaatta gctgaggcgg aacgaaattg
     1021 gatcaacagt caaaagaaca attaaacatt agagagatga ctaaagaaga tgtgccacaa
     1081 gtctttgatc ttgagcgtcg gagtttcaat gacagttctt ggacaattga cgcattttat
     1141 catgaaatag agcaaaataa ctttgcgaaa tattttgtct tagaatttga acaacaaatt
     1201 attggttatt taggtttatg gattgttatc gatcaagctc aaattacaac agttgcaatc
     1261 gatgataatt atagaggcta tggtttaggt caaatgcttt taaaatacgg aataaactat
     1321 gcaagtcaca cttgtgatgt gatgagttta gaagtaagag ttaataataa agtggcacaa
     1381 catgtatatg aaaatttagg atttcaatat ggtggtaaac gtaaaaatta ttatggtgaa
     1441 ggtgaggacg caatggttat gtgggtgaat ttaaatgact aaagatatat taatactagc
     1501 tgttgaaaca agttgtgatg aaacaagcgt tagtgttata aaaaatggca gagatatttt
     1561 atcaaataca gttttaagtc agattgaaag tcataaacga tttggcggtg tcgttcccga
     1621 agtggcaagt agacatcacg ttgaaggtat aacagcaaca ataaacgagg ctctagggga
     1681 tgccgatgta tcaatagaag atattgatgc catagcggtt acagaaggcc ctggactaat
     1741 tggtgcgtta ctaataggtg ttaatgcagc caaagcattg gcatttgctt acgataagcc
     1801 acttattcct gttcatcata ttgcaggaca tatatatgct aatcacatag aagagccatt
     1861 aacattcccg ctaattgcac ttattgtttc aggtggacat actgaattag tttatatgaa
     1921 ggatcattta tcatttgaag tcattggtga aacacgagat gacgcagtag gtgaggctta
     1981 tgataaagtg gcacgaacaa ttggtttaaa ttatccaggt ggtccacaag ttgatcggtt
     2041 ggctgctgaa ggtgaagata cttattcatt ccctcgtgtt tggttggata aagatagtta
     2101 tgattttagt tttagtgggt tgaaaagtgc cgtaatcaat caacttcaca atcaacgaca
     2161 aaaaaatatt ccaatcattg aagctaacgt agcaacgagc tttcaaaaca gtgttgtaga
     2221 ggtgctcacg tttaaagcta ttcaagcttg taaagaatat ggtgttcagc gattaattgt
     2281 tgctggtggc gtggcgagta ataaaggatt acgtcaatct ttagcggatc aatgcaaagt
     2341 caatgacatt caattaacta tcccaagtcc taaattatgc acagataatg ctgcaatgat
     2401 aggcgttgcc ggccactatt tgtatcagca aggtcgattt gctgatttag cattaaatgg
     2461 gcacagcaat atagatttag aagagtattc tgcagaataa aataaacgtc agttattaac
     2521 atgattacta tgaacattat tgaaactgtt catagtcttc tgtcatgtga tagctgacgt
     2581 ttttatgttt aaagttaaat gctaaatttt cgggacatta tcttttgctc gttcatatat
     2641 ttttgctgga aatgaagtga tttttaataa ttcgatggca ttacgtgtat ttgctttgcc
     2701 aggcttaatt ttgtaatcaa aatgtatgtt attattttct attacctcat tgaaatggta
     2761 attttcataa cgttgtttta agagttcagc taactcaata tcatgtgttg ctgcaataac
     2821 tctaaagtta gatttttcat gtaaaaatga tagtactgat tctgaagcgg caattcgttc
     2881 agttgtgttg gtacctttaa aaatttcatc tataaagcag tatatttttt gattatctgg
     2941 aatttcaaca atacgcttaa tagattttaa ttcagccata aaataactat cgcctgataa
     3001 cacatcatcg gcatttgcca ttgacgtgaa cacaattcca ggttgatata caaatttgct
     3061 tgcggtaact gtttgtatag ccgatgcaag aataatgttt attgctatgg atttcataaa
     3121 tgttgattta cccgaagcat tagacccagt taacagtata ttttgtgata gtgagaaatc
     3181 attggctact gcatctgcta tgagtggatg tgttaactca gagaatacta tgccatcatt
     3241 tgaatcatca atttgtggtt cagtataaca ttctagcgtt ctacgataca ttgctaatgc
     3301 ataatgatta tctaattcag ctatgtaatc gaaacaattt ttaagctcat tcatatgtgt
     3361 tgtatagctt ttttgaattg aatgaaataa aacataatca agcatgaaaa taagtttaac
     3421 tagtttaatt accatagctc cgatatcttc atcattaact tcagctaaaa cactcgttaa
     3481 atgacgtgct gttctaaatt gcttaaaatt gacttcaggt tgtggagcat gtttaatttt
     3541 tgagatagta tagccttgtt ttaaaacatt ggatgcataa aagatagatt ttaagtcatc
     3601 ctcatatgta cgctttaaag ttgctgataa aatgatatta aataggcaac tcataagaaa
     3661 taataaaata ccaacttgtg aattaataaa tataactgca aatgagataa ctggtaaaaa
     3721 cgggcataga aacaatatat tttgacgttt taccggtgtg atttggtctg gaaatgttgg
     3781 ataaacagtt ttaccaatca aagctaaatg atatgttacg ttttttctaa attcagcatt
     3841 atcattaaat aaactaagta atgatttgtt cgtaattgaa agcattccac gtaaacaggc
     3901 atatagcttc atttcaccaa tagctgttaa attataattc atcttatgaa agattgcatt
     3961 catatttaag tcggaccaag ttttatcatc aactaatgaa tgtgattcaa atttttcctt
     4021 gtagagctta tactcatagt cgaaatgtga gttcggtctg ataaaagctt ctaatggaga
     4081 aatcgtttgc cataatgttt ccatagattt taatagacgt tgacgactca tgtatcgtcc
     4141 aacaattcct attacagatg taagtagaat aattgctata acaaatatta aaaatgtttg
     4201 atttgtgctc ataagtatcc ccttatttat ttttaataat aataaaaata tacttcaata
     4261 ttattattat ttcataaaga aaatgtctta acaatgaatt ttgataaaaa caatgtcaat
     4321 agagaacatg cgtacttatc aacaaagagt gaataacttg tggataaaag gtgttgataa
     4381 cgtcatttat tgtggatatc aggtgggaaa acagaaaata aatgattgat tagtgttaat
     4441 ttacttgtgg gtaactagga taagtctgtg gatagctata atatcagcgt ttttattgtg
     4501 aataaaaaaa attaaaattt gtaaaaaaat aactctaact atagcgattt tacagttaga
     4561 gttatgtata tttttatagt ttttgttgta attcttccca tttagacata gcgtgttcta
     4621 atttttgttc gctatcttgt ttttggatag ctaattcgtt tgctttttgt ggattgttat
     4681 acacttctgg ttgggttaat tgctcgtcta tttgtaagat agtagtctct aaagtttcta
     4741 tttcattttc acactcggat atttgtcgtt caagtttgcg ttgttcacgt ctttgttctt
     4801 tttggttatg atacgacgat tgttccatag actttttatg tgcttgtacg ttaactgact
     4861 gttcttcttg gtgcgctttc aacgcttccg cttcctcaac tttttcaatg taatattgat
     4921 aatctcctaa atacatcttt ccgccatcaa ttgttaaatc aaataccttg tttgctaatt
     4981 ggttaataaa gtaacgatca tgggaaacaa atagtattgt tccttcaaaa tgttggagtg
     5041 cttgctctaa catttctttt gaatctatat cgaggtggtt ggtaggttca tctaaaataa
     5101 gtacattgtc acgttgcaac ataagtagtg ctagttgtaa acgtgctttt tcaccaccag
     5161 ataaatcatt aattatcttt ttaacatcgt cttgtacaaa taagaaacgt ccaagaactg
     5221 ctcgaatatc tttttcattc attaacggat attgatccca cacataatct aaaatcgttt
     5281 tactagattt aaattctgct tgcttttgat cataataacc aatttgtaaa tttgcgccga
     5341 aagtaatatc gccattaagc gctttttgtt gattagcaat agttttaatt aaggtcgatt
     5401 ttccaatacc atttggccca atgattgcta tatgatcgcc tttagagacc tctatactca
     5461 taggtttggt aattgcagtt tgataaccga tttctaaatt ttttacatgc atgacgtcat
     5521 tacctgtatt ccggtcaaag ccaaattgaa tatttgcact tttggcatct aacattggtt
     5581 tatcaatgcg ttccattttt tctaaaatct tacgtctact ttttgccatt ccacttgttg
     5641 aagcacgggt aatatttttc tcaacaaaag tttctaatcg ttttatttct gcttgttgac
     5701 tttcatattc ttgcattcgt ttttgataat ataaatcccg ttgctgtata aattcctcgt
     5761 aattaccaac atagcgtttg acatcaccta aagccacatc ataaatttga gtaactattt
     5821 tatctaaaaa gtaacgatca tggctgatga tgacgattgc acctttaaaa taacgtagat
     5881 aatcttcaag ccactttgtc gtttctaaat ctaagtggtt agtaggttca tctaaaagta
     5941 ataaatcagg ttcgtttaat agcatttgag ctaaagataa acgtgttttt tggccaccgc
     6001 taaaatcatt gataggttta ttgaaatctt cttcactaaa atttaacccg taaagtactg
     6061 ttttaatttt actttcatat tgatatcctt ctaattgttc aaattgattc gataaagatt
     6121 cataacggga catatgtgtt ttatatgtat cactatcgta atcatttgca tgttttgata
     6181 accaatctgt ttcttctttg attaagcttt ccattcgttt aatatgttca aatggttttg
     6241 acatttcttc aaaaactgtt gcattagaat ttaaagtcat ttgttgagtt aaataaccta
     6301 gttttaagtt tttaattttt gacacatttc cagaatcata gttttctacg ccagctataa
     6361 ttttcatcaa tgttgattta ccggcgccat ttcttcctac gataccaatt cgttcaccag
     6421 tttttacttc aaaatcaaca tcagtaaata tatcttcacc atcgaacgat tttgatatat
     6481 gattgagttg taaaagtatc attcgatctt cacctttcgt ctttctcaaa ttttattaac
     6541 ttatgaaaaa agtcgtaatt attacattaa taaccatttt acagtataaa acgccgtctt
     6601 gaaactaaga tatttatttt taaaattcaa taatgtataa tatttaggta ttcattgtaa
     6661 tcaattattt gttttttaat aatctaacaa ttacgctcta actcgtttga atacatagat
     6721 ataattcatt caaacacgaa ggaggaaata gcgaatgagt gaccaagtta aaattcctcg
     6781 agcaacttta aaacgtttgc cgttatatta tagatttgtc agttcattaa aatctaaagg
     6841 tatagatcgt gtaaattcaa aagcgattag cgatgcgtta caaattgact cggcaacaat
     6901 tcgtcgtgac ttttcatatt ttggcgaatt aggtaaaaaa gggtacggat ataatataga
     6961 tagtttattg gatttcttta aatctgaact aagcgagagt gacatgatca aaatcgcaat
     7021 tgtcggagtt gggaacctag ggaaagcttt gctcacatat aacttttcaa tacatgacga
     7081 tatgacgatt acagaagcgt ttgacgtaaa agaagatgtt attggccaga aaatagggaa
     7141 cgttattgtt aaagataacg atgaattaat aacaacattg aagaaggaag aaatagatgt
     7201 tgtgattcta actacaccag aaagagttgc acagaaagtt gcagatgaac tcgtccaagc
     7261 tggtgtgaaa ggtattttaa acttcactcc tggtagaatt aatacgcctt cagatgtgca
     7321 agtacatcaa attgacttag gtatagaatt acagtcatta ttattcttta tgaaaaatta
     7381 cagtgaataa atgtgatgtt agctttgaat gattaacctt gttatatctt taattaatta
     7441 tagaacagtc tgggactaag tatgtctcag gctttttctg ttatgtttga aaatgaaagg
     7501 aaaaactgtt gtgttgataa atatagtata ggttaataaa ttaacacgta gagatataat
     7561 gatgaatcgt aattaatcgc cttccttata tgaatataat ataaatatca aaaatattgt
     7621 gtataaggtt gaaaacaaga aaatcatcac ctataataca tactaaactt atcggaaatg
     7681 agaggttagg attatgtgga tgatttttag tggcttaatt gtcgggggac tcttaggttt
     7741 tgtcatgcaa agaacaagat tttgtttaac aggtggcttt cgagatatgt atgtgcaaaa
     7801 gaataataag atgttctatg cattattaat cgctattact attcaaagta taggattatt
     7861 gattttgacg gcaacagata ttttacaaat tcctgcacat agttttccaa tattgggaac
     7921 aattataggt tcttttattt ttggaattgg aatagtattg gctggaggat gtgcaacagg
     7981 tacttggtat cgcgctggtg aagggctaat tggtagttgg attgcattag tattatatgc
     8041 tgttactgca gcaatcacta aaacagggat tttaaagcca gtaatggata aaattaatca
     8101 accaacgaat gtaaatagtg atatgtctca aacaactggc attccgtttt ggggattagt
     8161 cgttatatta actataatca ccatttttct agttgtaaga acactcaata ataagaaagt
     8221 tcgagttgct gttccaaaac taaagcaacg ttatacaggt attagatatt accttttcga
     8281 aaaacgatac catccattta ttgcagcaat tgtaattgga cttatcgcac tcttagcttg
     8341 gccaatgagt gcatcaactg gaagaaatga cggtttaggt ataacaacgc cttcagcaaa
     8401 tttagtacac tttttgatta caggtgaaac taaatttatt gattggggtg tctttttagt
     8461 tctaggaatt ttcattggtt catatattgc agctagagga tcaagagaat ttaaatggcg
     8521 attgccagac aagattacaa tacgaaacag tgccattggt ggcatatgta tgggatttgg
     8581 tgcgtcagtt gctggtggtt gttctatcgg taacggtttg gttgaaacgg caacgatgac
     8641 ttggcaagga tggattgcgc tagcatcgat gatagttggt gtatggacaa tgagtcattt
     8701 tatctttgtt cgtccaatga aaaaagtaca ccaacaatct gcaaaggtta aacagcaaac
     8761 gcaaatagta tagaagatta ttatgcaaat gatgttgatc aaataaaagt gattggaaaa
     8821 ggagaaataa ttatgataca cgaattaggt acagtaggaa tggtatgtcc atttccgtta
     8881 attgaagcgc aaaagaaaat ggcaacattg caatctggag atgaattaaa aattgatttt
     8941 gattgcacgc aagcgacgga agccattcca aattgggctg cagaaaatgg ttatcctgta
     9001 acaaactatg aacaaattga taatgcttca tggacaatta caattcaaaa agtttaacgt
     9061 tatcatttta acaataaaat agatattaga ttctatggct acttccgcta atttaaaagt
     9121 gagtaagtag tcttttttgt tttagttcat gaaatcattt ttatatagcg tggcacattt
     9181 tattccaaaa gatgtaataa aacttaacgc atttttgctt tttataaatt gtcagattat
     9241 tatgaaaaaa agggagtggt aagtatgaat cttaacgata cgatatttat gtttttgtgt
     9301 acattattag tttggttaat gacaccagga ttaagtttat tttatggtgg gttagttcaa
     9361 tctaaaaatg cgcttaatac tgtcatgcaa agtatggcag caattgtgct tgttacattt
     9421 gtatggataa cagttggttt tacaattagt tttgggaatg ggaatttatg gttcggaaat
     9481 tgggaatata cttttcttaa tcatgtaggt tttgcgactc aagaagatat tagcccacat
     9541 attcctttcg ctttgtttat gttatttcaa atgatgtttt gtacgattgc aatttctatt
     9601 ttatctggtt caatcgctga gaaaatgaag tttattcctt atttattatt cgtagtaata
     9661 tggactgctc ttgtatacag tccagtagca cattgggttt ggggcggcgg ttggattaac
     9721 aaactcggtg tattagattt cgctggaggt acggttgttc atattacatc aggtgtttct
     9781 ggtttagtat tagctattat gattggaaaa ggaaacaaac attctgaatc aacaccacat
     9841 aatcttatca ttacgttgat tggcggtata ttcgtgtgga ttggttggta tggatttaat
     9901 gtaggtagtg cttttacatt tgataatatt gcgatgcttg catttacaaa tactgtcatt
     9961 tcagccagtg caggtgctat aggttggtta attttagaat atatttttaa aaagacgaca
    10021 agtttacttg gacttttact cggtgcatta gcaggattag ttgtcattac tcctgcagca
    10081 ggatatgtaa catatcttag tgcaacaata atggctttaa taggaggtat ctgttgttat
    10141 attgtcatta attacatcaa ggtaaaacta aaatatcatg atgcattaga tgcatttggt
    10201 attcatggtg ttggtggtat tattggtgct gttttaacag cagttttcca aagtaaaaaa
    10261 gccaatcctg acattgagaa tggctttatt tatactggtg acatacatat tatacttgta
    10321 caaatattat gtgtaacagc agttgtaatt tttagtatag tcatgacgtt tattattgcg
    10381 aaagtaatta aattaattac accattatct gttacggaac aagaaacgaa tataggatta
    10441 gacaagattg ttcacggtga acatgcttac tttgaaggtg agctaaatag attcaataaa
    10501 catattcgat attagaatat atttacatag aatattcatt gtcctgacat ttaactaaag
    10561 gttgatgttg ggacattttg ttatacaaaa gttttatttt gaaatctttt tatgaaagaa
    10621 gcagaaatat tatttaaagc ggttacacat atgctaaaat aaggctaagt gtcacaaata
    10681 atgataggtg aataagtatg aaaaatatat ctgatattgc caaattggca ggcgtttcaa
    10741 aaagtacagt atctagattt ttaaataatg gatctgtcag taaaaaaaca agtgaaaaat
    10801 taacaagaat tatagcagaa catgactatc aaccgaatca atttgctcaa agtttaagag
    10861 cgagacaaac acaccttatt ggtgccatta tacctagaat gaattcatat gcagtagatg
    10921 aaacaatcaa aggattggca aaacaatgcc aaaaatatga atcacaatta attttaaatt
    10981 acacaggttt aaatatcgaa gcagaaatac aagcgcttga aacattagca cgtagtaaag
    11041 tagatggtat tgttttaatg gctacagaca taacagagag acatattgaa gtcattaata
    11101 aaatgaatgt accaatcgtt attgttggtc aacaacatga acaacttcat agtattgtgc
    11161 atgatgatta taaagcaggt caaattatag gcgaatggat tggtcaacag ggatatcaac
    11221 aagttgaagt gtttagtgta agtgaaaaag atattgcagt tggtatacat agaaaacgtg
    11281 gtttacttga ccagttagct aaataccaaa ttaaacctaa tatacatgaa acaaatttta
    11341 cttatgtgga agcacaaaaa gatgttgcaa atgttttgga aaatgtggag caagtagatg
    11401 cggttgttgg agcaactgat acgattgcat tagctgccta taaatattat tctgataaaa
    11461 aagatgttat gaaaccacat caaatatatg gttttggtgg tgacccaatg acacaattag
    11521 tgtctccatc gataaaaaca attcattata attattttga agctggccaa tgcgcgatgg
    11581 aagagataca acagatgctt aaaaagcaag atatgccata tagcgtcaca gtagatgtta
    11641 atatttagac gctgtatttt ttaaaataaa tgtggaaccg ataccatata actataaatg
    11701 gataggttaa aagttaaaga acgtaggtaa aatttgctat aatagaatat aaattgttaa
    11761 cagcataaat tataaaagga ggactgggta aatattatga ccgaatggac tagagaagaa
    11821 cgttatcaac gaatcgagga cgttgatact gagtatttta aaacattaaa acaacaagtt
    11881 gatcaatcaa aatttcgtca acaatttcat atacaaccag aaacaggctt attaaatgac
    11941 cccaacggac ttatttttta taaagggaag tattatgttt cacatcaatg gttcccatta
    12001 ggcgcagtac atggcttaaa gtattggtat aactacacga gtgatgactt aataaacttt
    12061 aaagctgaag ggccaatttt aaatccagat actaaatatg acagccatgg tgtatatagc
    12121 ggtagcgctt ttgaatataa cgggcattta tattatatgt acacaggaaa tcatcgagat
    12181 aatcattggc aacgacatgc gagtcagatg atcgcacgat tgaaagaaga cggttcagtt
    12241 gaaaagtttc caaagccagt aattagccaa caaccagaag gatatacgag tcattttaga
    12301 gatcctaaag tttttaaata tgatgagaaa tattatgcaa tcattggtgc acaaaataat
    12361 gatcagcaag gtcgattatt actttataat actgaagata taattaattg gcattattta
    12421 ggtgaaataa atacagagtt ggatgatttt ggatatatgt gggaatgccc agattacttt
    12481 aatgtagata atcaagatgt catacttatt tgtccacaag gtattgaacc aaaaggcgat
    12541 cagttcaaaa atatttatca aagtggttat atacttggaa agtttgatat tgaaaagtta
    12601 acatatgaac atgaaaattt tgtcgagctt gataatggtt ttgatttcta tgcacctcaa
    12661 acatttttag atgaaaaagg ccgacgagta ctaattggat ggatggggtt accggaaatc
    12721 gaatatccta ctgataatga aggatgggcc cattgcttaa caattcctcg tgtattaaat
    12781 gtagaaaatg gtcaacttaa gcaacgtcca tatccagcgt tggaaaaatt acgtcacaat
    12841 aaagagacag cattaggcta cgcaaataaa tttactcgaa aattacatcc gtatgaaggt
    12901 aaacagtatg aattaatcat agatattttg gataatgatg ctaccgaagt gtactttgaa
    12961 ttacgtacat ctaagacttc ttcaacatta attgcttata acaagcgtga aaataaaata
    13021 acattagatc gcagcgacag tggtttattg ccgacaaatg ttgaaggtac gacgcgtagt
    13081 acgatattag acacgccatt aaagcaatta caaatttttg ttgatacatc tagtatagaa
    13141 attttctgta atgatggaga acgtgttttg acatctcgaa ttttcccgac agaagacgca
    13201 ctaggtatta aaacatcaac agaatcaggg caagtatatt tacaatttac taaatatgat
    13261 ttaaaggatg aacataaatg agacgtctat tttcaatagg agaagcgtta attgatttta
    13321 ttccaaatgt tacaaatgcg aatttaaaag atgttcaaac atttacgaag caaattggtg
    13381 gcgcgccatg caatgtagct tgtacagttc aaaagttagg acaacaagcg tatatgatta
    13441 cacaattagg taatgatgca tttggagata gcattattga aacgatatca agtattggtg
    13501 tagatgtatc aaaagtgtat cgcacgaatg aagcaaacac tgcgttagct tttgtgagtt
    13561 tgactgaagc gggcgagcga gatttttctt tttatcgtaa gccctctgct gatatgttat
    13621 ttgaaccaag ttttgtgaat gatattgatg tgaatgaaaa tgatgtagta catttttgtt
    13681 ctgttgattt ggtcgatagt ccgatgagag atgcacatta tcaattgatt accaaaacat
    13741 taaatgcaaa tggtactgtc gtatttgatc ctaatgtaag attgccatta tgggataacg
    13801 ctgaagattt aagacaaact attcatacct ttttgccatt ggcgcatatt gtaaaagttt
    13861 cagatgaaga attagaattt attacaggta ttcatgatga aaatgaagcc attcaatcat
    13921 tatttacagg taatgttact gtagtcattt atacgaaggg agcagatggt gctgccgtat
    13981 atttgaaaaa tggtattaat cattatcata gtggctataa ggtaaaacct gttgatacaa
    14041 ctggggcagg ggatgcattt attggtgcag ttattagcag gattttagca accgatgtgt
    14101 taaatttaac tcagttattt gaaaatgaag gtgaggaaat tttagcgttt agcaatcgcg
    14161 ttgctgcaat agtgacaacg aagtatggtg ctattaatag tttgccaaca ttacaagagg
    14221 ttgaacaagc attttaaata attcatttat aaaacagtgt aggaaacaag ttgaatcttg
    14281 tgctacactg ttttttaaaa caaaataaga ttcacggagt aggaaattat agcattttat
    14341 ttatggaaac tgtcaatttc aaatttagta tattttgtta aaaattgcgc cataggattg
    14401 tagagtgaaa tagaaattga taaattatgt agtaatagga ataggtatac aaagagacgt
    14461 tacatcattt tttaattcac gcgtcatatt taattttgtt aataaaatta aaaagccagc
    14521 tatacagtgc atttgctagt tatcttgtta aaatccaaca agatttacaa ttgaatacgc
    14581 cgttaactga ctttattatc ttattatatt tttttaacgt ttctcaccga tgcatagcag
    14641 tgttctttat ttttaaaata gacaattcgc tctttcgaat ctatagattc aatattatgg
    14701 cgattgacga caaagctatt atgacatcta aagaaacgat catctaattg actcagttct
    14761 tttaaattac cataaaattc aatttgacgg ttatctaaat gggcaatgag tctgtgagat
    14821 tttgttgatg attcaaaaaa cataatatca tcatattgaa catacactga attactgcca
    14881 cgttttaatt caatcgtttc aacgctatta tctttagaca acaattgtaa gcgtgtatgt
    14941 gcagtttcta aacagtctat aattcgagtt cttaattcag ctggatcatc tttaaaaata
    15001 aaatccatcg ctgcaacttt gtagacaaat gttaaatagg taagttcact gtgactcgta
    15061 acgaaaataa tgttaccaac tgggtcatgc ttacgaattt cactgcctaa tttgatacca
    15121 ttaatatcag ttgaaagttg aatatctaaa aagtaacagc ctatgtcatt catattttta
    15181 gcttgctcaa gcacctcata aggattatca gttgcgaggg caatttccat aggcttttct
    15241 tctatcatta tataattttt aataatggta accatgtttt ctctttgttt tggatcgtct
    15301 tcgcaaatga aaattttcat acattcacat ccttatggct agttgttaat aatttcaact
    15361 ttttgaataa agaaaccatt ttcgataatt gtatctaata agacattgtc tgcattatca
    15421 gcaatttctt ttaaagttga tagacctaaa ccacgacctt cacctttagt agaaaaactt
    15481 tcttggaaca attcatgaat gcgtggtata tcatcagcgc atttattcat aacaataaac
    15541 gttactgaat tttcactttc aataaatgca acgcgaatga tagggtcatc aatttcagtt
    15601 gatgcctcaa ttgcattatc aagaataata ccaatactgc gacttaaatc gatcatattc
    15661 aagttaatgc tacttacttc atcgggtatt tcgatactaa tcggaatatt catttcttgt
    15721 gcacgtaaaa ttttcgcagt aattaagcct ttaatttcac gtactttaag attctcgata
    15781 ccatttaatt ttatagcatt catttgtaaa ttgtctttca taggtacaat atttttattg
    15841 aaataatcac gtaggccagg catgtcatct tctcgaatgt attctgaaag tgtcgttaag
    15901 atattgacat aatcatgacg gaacttgcgc atttcgttgt tgatagcttc aatcttcaat
    15961 gtatattcat aataggtttc aatttcttct tgattacgtt tatatttcat ctctttaagg
    16021 agaaattgag aaataacaaa tgttaatata cttaaaaata tagtgatacc aataaaaata
    16081 aaagaatact gccttattac tttagcttca tccgagttta tttgtgaata aaagaaaaat
    16141 aatgaaaaag taagcagtaa gatagtcgaa ataactatta aaaatccttt gtttagtatt
    16201 agatatggtg tgctaatttt tttgagaact ctatttatta tatatgagaa tagtatacta
    16261 atagtcacat aaactacaaa aaagctaggg aatattacaa atatactatc agaaattttg
    16321 gtgatatatg catatataac tatatacatg tagttagcac agtatagaat aatctgcgaa
    16381 gtcataatca acaaaataga ataccatttg attttgacaa aatacattat aataataaat
    16441 gaagttaata tgattaagga cgcgctatca aacattttaa atagaaataa cgataatgtc
    16501 gaaattacta tgatgaaaaa ataatcaagt ttactgtact taataccact aattatagct
    16561 ggtattgtaa acattaatat catttgagtt aatacgaata aaacaaaatt ataactattt
    16621 aataattcca cctactatca cactctctat ttaaattatt cgtgtaattg tgttaattct
    16681 tttggtactt caacttcatc cattatgaag tcacaagtac tataagctgc gatgttacca
    16741 atgtttttta aaatcccagt aataaaatca aaaaataagt taaataatgt attcatttta
    16801 agtcctcctt aataaagaaa ataggtaata atgtaatagc ttctattatg atgcctaatt
    16861 gaatgaattg ggcaaatggc tctttgatga taagtgtgat aatgaaaagg gttaaactaa
    16921 caataatcgc ataatatttt tttcgtttaa taagtcgcac aggaatgggc ttctttttag
    16981 ttgctgcagg agcatatact gagattacac ctaaagaaat aactgttaaa ataatcataa
    17041 ttaaaaagtt aatatgaaaa tttactatta ctaaaggtaa aagtataaat agtataatac
    17101 tttctacata acaccaaaaa gaagaaggtg catgtgcacc atgtgcatgt cttcttatta
    17161 aataaaatgt taaattcgta attaacgtaa acagaaaaat gtttaaaata taggcaatag
    17221 tatacataac aattaattta cctatatttt tagctaagac ctgcatccct aatcgtactt
    17281 gcaaaaattg aatatgatct aagttatttc tcttttgaag atacgtggca aactggtcaa
    17341 ttttattatc aaaataattc aattttacac cactctcctc actgtcatta tacgatttag
    17401 tacaatcttt tatcatt
//
LOCUS       DALPQQ010000049        17129 bp    DNA     linear   BCT 22-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus strain K18-6-464
            SAMD00233528-rid16434743.denovo.049, whole genome shotgun sequence.
ACCESSION   DALPQQ010000049 DALPQQ010000000
VERSION     DALPQQ010000049.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMD00233528
            Sequence Read Archive: DRR236061
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 17129)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 17129)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001543423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001543423.1
            Genome Coverage       :: 77x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/22/2022 17:09:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,811
            CDSs (total)                      :: 2,743
            Genes (coding)                    :: 2,689
            CDSs (with protein)               :: 2,689
            Genes (RNA)                       :: 68
            rRNAs                             :: 2, 4, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 4, 2 (16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 54
            CDSs (without protein)            :: 54
            Pseudo Genes (ambiguous residues) :: 0 of 54
            Pseudo Genes (frameshifted)       :: 27 of 54
            Pseudo Genes (incomplete)         :: 27 of 54
            Pseudo Genes (internal stop)      :: 10 of 54
            Pseudo Genes (multiple problems)  :: 10 of 54
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..17129
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMD00233528-rid16434743.denovo.049"
                     /strain="K18-6-464"
                     /db_xref="taxon:1280"
                     /geo_loc_name="Japan: Niigata"
     gene            complement(227..892)
                     /locus_tag="O7798_001345"
     CDS             complement(227..892)
                     /locus_tag="O7798_001345"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501103.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HDC2863611.1"
                     /translation="MALVVEDIVKNFGEGLSETKVLKGINFEVEQGEFVILNGASGSG
                     KTTLLTILGGLLSQTSGTVLYNDAPLFDKQHRPSDLRLEDIGFIFQSSHLVPYLKVIE
                     QLTLVGQEAGMTKQQSSTRAIQLLKNIGLEDRLNVYPHQLSGGEKQRVAIMRAFMNNP
                     KIILADEPTASLDADRATKVVEMIRQQIKEQQMIGIMITHDRRLFEYADRVIELEDGK
                     ITD"
     gene            complement(892..1947)
                     /locus_tag="O7798_001346"
     CDS             complement(892..1947)
                     /locus_tag="O7798_001346"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501104.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HDC2863612.1"
                     /translation="MKLAIKEIMFYKFRYILITLIILLLSIMVLFISGLAQGLGRENI
                     SLFEHFDNDEYVVQKMKEPQIEKSQLSDTQQNQIKKVIHQEPYKMNIQTLKLSNKEQD
                     VITMNDVKQQRIQLKKGDYPKNAHEVAINDKLAADNIRVGDRLHFKNNSTSYRVSGIL
                     NDTMYAHSSIVLLNDNGFNALNKVNTAFYPVKNLTQQQRDELNKINDVQVVSEKDLTG
                     NIASYQAEQAPLNMMIVSLFAITAIVLSAFFYVMTIQKISQIGILKAIGIKTRHLLSA
                     LVLQILTLTIIGVGIAVIIIVGLSFMMPVTMPFYLTTQNILLMVGIFILVAILGASLS
                     FIKLFKVDPIEAIGGAE"
     gene            2083..2757
                     /gene="hssR"
                     /locus_tag="O7798_001347"
     CDS             2083..2757
                     /gene="hssR"
                     /locus_tag="O7798_001347"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501105.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding heme response regulator HssR"
                     /protein_id="HDC2863613.1"
                     /translation="MVQCLVVDDDPRILNYIASHLQTEHIDAYTQPSGEAALKLLEKQ
                     RVDIAVVDIMMDGMDGFQLCNTLKNDYDIPVIMLTARDALSDKERAFISGTDDYVTKP
                     FEVKELIFRIRAVLRRYNINSNSEMTIGNLTLNQSYLELQVSNKTMTLPNKEFQLLFM
                     LAARPKQIFTREQIIEKIWGYDYEGDERTVDVHIKRLRQRLKKLNATLTIETVRGQGY
                     KVENHV"
     gene            2750..4123
                     /gene="hssS"
                     /locus_tag="O7798_001348"
     CDS             2750..4123
                     /gene="hssS"
                     /locus_tag="O7798_001348"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501106.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heme sensor histidine kinase HssS"
                     /protein_id="HDC2863614.1"
                     /translation="MFKTLYARIAIYSITVILFSALISFVLTNVYYHYNLKASNDAKI
                     MKTLKEARQYEQSAKPTHIQQYFKHLGQMNYQIMTIDQKGHKTFYGEPFREDTLSQNA
                     INNVLNNQDYHGIKDKPFALFVTGFFDNVTDNTVGINFKTKDGSIAVFMRPDIGETFS
                     EFRTFLAVLLMLLLFISISLVIASTYSIIRPVKKLKLATERLIDGDFETPIKQTRKDE
                     IGTLQYHFNKMRESLGQVDQMRQHFVQNVSHEIKTPLTHIHHLLSELQQTSDKTLRQQ
                     YINDIYTITTQLSGLTTELLLLSELDNHQHLLFDDKIQVNQLIKDIIRHEQFAADEKS
                     LIILADLESINFLGNQRLLHQALSNLLINAIKYTDVGGAIDIALQHSHNNIIFTISND
                     GSPISPQAEARLFERFYKVSKHDNSNGLGLAITKSIIELHHGTIQFTQSNEYVTTFTI
                     TLPNNSL"
     gene            4286..4729
                     /locus_tag="O7798_001349"
     CDS             4286..4729
                     /locus_tag="O7798_001349"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501107.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HDC2863615.1"
                     /translation="MMKLNLFINANETESYIDIHAPKMNDNVQSIINAVNDLDKSHTL
                     VGYIDKEIHIINVSDVITFQVINKNVTAITSNQKFKLKLRLYELEKQLPQHFIRISKS
                     EIVNKYYIEKLLLEPNGLIRMYLKDAHYTYSSRRYLKSIKERLSI"
     gene            4726..5181
                     /locus_tag="O7798_001350"
     CDS             4726..5181
                     /locus_tag="O7798_001350"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501108.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3021 domain-containing protein"
                     /protein_id="HDC2863616.1"
                     /translation="MKNLKNSLFISLIIGLSLSLFFSMLFADGKYYPLNPQSTIGILY
                     YTHFTETTVMLISIILWLLIGVVFFLGDFIFKYTDWSITKATIMHFITTYVGFLPLAM
                     LAGWFPLTVHYLIIFTIIFIVVYVLIWIIQFFKNKNYVDTINKQLKQLK"
     gene            complement(5247..6725)
                     /gene="mqo"
                     /locus_tag="O7798_001351"
     CDS             complement(5247..6725)
                     /gene="mqo"
                     /locus_tag="O7798_001351"
                     /EC_number="1.1.5.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501109.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="malate dehydrogenase (quinone)"
                     /protein_id="HDC2863617.1"
                     /translation="MTTQHSKTDVILIGGGIMSATLGTLLKELSPEKNIKVFEKLAQP
                     GEESSNVWNNAGTGHSALCELNYTKEGKDGTVDCSKAIKINEQYQISKQFWAYLVKTG
                     QLDNPDRFIQAVPHMSFVIGEDNVAFIKSRVATLKKSILFEKMKLSQDEEEMKSWVPL
                     MIEGRKSDEPIALTYDETGTDVNFGALTAKLFDNLEQRGVGIQYKQNVLDIKKQKSGV
                     WLVKVKDLETNETTTYESDFVFIGAGGASLPLLQKTGIKQSKHIGGFPVSGLFLRCTN
                     QEVIDRHHAKVYGKAAVGAPPMSVPHLDTRFVDGKRSLLFGPFAGFSPKFLKTGSHMD
                     LIKSVKPNNIVTMLSAGIKEMSLTKYLVSQLMLSNDERMDDLRVFFPNAKNEDWEVIT
                     AGQRVQVIKDTEDSKGNLQFGTEVITSDDGTLAALLGASPGASTAVDIMFDVLQRCYR
                     DEFKGWEPKIKEMVPSFGYRLTDHEDLYHKINEEVTKYLQVK"
     gene            complement(7106..8704)
                     /locus_tag="O7798_001352"
     CDS             complement(7106..8704)
                     /locus_tag="O7798_001352"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501110.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-lactate permease"
                     /protein_id="HDC2863618.1"
                     /translation="MLVNTFNPFDNLLLSSLIAAIPIVLFLLCLTVFKMKGIYAAITT
                     LVVTLLIAIPFFKLPVGIASGAVVEGFFQGIIPIGYIVMMAVLLYKITVESGQFLTIQ
                     DSITNISQDQRIQVLLIGFAFNAFLEGAAGFGVPIAICALLLTQLGFNPLKAAMLCLV
                     ANAASGAFGAIGIPVGVVETLKLPGDVSVLGVSQSATLTLAIINFIIPFLLIFIIDGF
                     RGVKETLPAILVVSITYTLTQGLLTVFSGPELADIIPPLLTMLALAVFSKKFQPKHIY
                     RVNKDEEIEPAKAHSAKAVLHAWSPFIVLTVIVMIWSAPFFKNLFLPNGALSSLVFKF
                     NLPGTISEVTHKPLVLTLNIIGQTGTAILLTIIITILMSKKVNFKDAGRLFGVTFKEL
                     WLPVLTICFILAISKITTYGGLSAAMGQGIAKAGNVFPVLSPILGWIGVFMTGSVVNN
                     NSLFAPIQASVAQQIGTSGSLLVSANTVGGVAAKLISPQSIAIATAAVKQVGKESELL
                     KMTLKYSVCLLIFICIWTFILSLL"
     gene            9021..10694
                     /locus_tag="O7798_001353"
     CDS             9021..10694
                     /locus_tag="O7798_001353"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501111.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CDP-glycerol glycerophosphotransferase family
                     protein"
                     /protein_id="HDC2863619.1"
                     /translation="MIKQINVSNMQKFESQLMKAQSEGYTHVVPYANEIMIYQSMLDA
                     VQLYPKSIVVDYTVDGQYKNDCHYFGQSSINIADWAQNNNYYPNLIYAIQQTLDLIHY
                     YSVETIFDLALLTLLKGDLSIDGHVVFDFKAPIATSASIWETIKTIEDFDMMSQFYLN
                     KMAYIDHHPIPFRNLFIEDSEQLNSPDNWLYSTKFMLPKWLYKIAKQRADNKQLQNFG
                     LYTKQPNVLKDHIVFIGDHHQYIGNSKYLFTYFVKHNPMTACYFVTDDRRGPHFISPK
                     SEKADELINSARVVIVENDIPETLQPNGTLIQLHQGTPIMQLFLDSKEPIKNIETPFY
                     RAKRYNRWLQFDYVIHSADDISHFYQTAFPSHQANVLAYGNPKHQYLLQKSNESTTQQ
                     QFKKSFKINDQKPVLLYAPIGLVSAQQLPLSDALFKAYHVVVQGVDEAILPEEALVAP
                     KYLSAQDLILMSDVVITDYSNIIFDAMAIDKTVALYTPNHSQYIESQGVNEDIWRHLS
                     KIWYTDRQLLINNLISQAIPVIKYPQIQHKEQPLESISQLILSKMTSNQ"
     gene            complement(10847..11476)
                     /locus_tag="O7798_001354"
     CDS             complement(10847..11476)
                     /locus_tag="O7798_001354"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501112.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDC2863620.1"
                     /translation="MKRLVTGLLALSLFLAACGQDSDQQKDGNKEKDDKAKTEQQDKK
                     TNDSSKDKKDNKDDSKDVNKDNKDNSANDNQQQSNSNATNNDQNQTNNNQSSNNQANN
                     NQKSSYVAPYYGQNAAPVARQIYPFNGNKNQALQQLPNFQTALNAANNEANKFGSNNK
                     VYNDYSIEEHNGNYKYVFSFKDPNANGKYSIVTVDYTGQAMVTDPNYQQ"
     gene            complement(11790..12305)
                     /locus_tag="O7798_001355"
     CDS             complement(11790..12305)
                     /locus_tag="O7798_001355"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501113.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HDC2863621.1"
                     /translation="MAGIIKEISEQNASELVELATRTFYDTFGSYYDDKDFDQFFKDN
                     YTVEKFTQEINHVDSFHYFYQEDGANVGYIKMNINSAQTEEMGEAYLEVQRIYFLKDF
                     QGGGRGSQLIELAEKIAQEHNKHKIWLGVWEHNPRAQAFYKRHGFKVVGEHHFQTGDV
                     TDTDLIMEKEL"
     gene            12496..13500
                     /locus_tag="O7798_001356"
     CDS             12496..13500
                     /locus_tag="O7798_001356"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000573244.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="oxidoreductase"
                     /protein_id="HDC2863622.1"
                     /translation="MIETFKAFVIDKDESGKVTPTFKQLSPTDLPKGDVLIKVHYSGI
                     NYKDALATQDHNAVVKSYPMIPGIDLAGTIVESEAPGFEKGEQVIVTSYDLGVSHYGG
                     FSEYARVKSEWIIKLPDTLTLEESMIYGTAGYTAGLAIERLEKVGMNIEDGPVLVRGA
                     SGGVGTLAVLMLNELGYKVIASTGKQDVSDQLLELGAKEVIDRLPVEDDHKKPLASST
                     WQACVDPVGGEGINYVTKRLNHSGSIAVIGMTAGNTYTNSVFPHILRGVNILGIDSVF
                     TAMKLRQRVWRRLAKDLMPENLHEIKQVITFDELPEQLNKVIKHENKGRIVIDFGVDK
                     "
     gene            complement(13546..13947)
                     /locus_tag="O7798_001357"
     CDS             complement(13546..13947)
                     /locus_tag="O7798_001357"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000241591.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HDC2863623.1"
                     /translation="MVKVTYDIPTCEDYCALRINAGMSPKTREAAEKGLPNALFTVTL
                     YDKDRLIGMGRVIGDGGTVFQIVDIAVLKSHQGQGYGSLIMEHIMQYIKGVAVESTYV
                     SLIADYPADKLYTKFGFIPTEPDSGGMYIKY"
     gene            complement(13983..15017)
                     /locus_tag="O7798_001358"
     CDS             complement(13983..15017)
                     /locus_tag="O7798_001358"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501116.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)/FAD-dependent oxidoreductase"
                     /protein_id="HDC2863624.1"
                     /translation="MKDVTIIGGGPSGLYASFYAGLRDMSVRLIDVQSELGGKMRIYP
                     EKIIWDIGGIAPKPCHEILKDTIKQGLYFKPEVHLNERVVDIRKKAERHFEVETEAGE
                     IYTSKAVIIAIGAGIINPKQLDVKGVERYQLTNLHYVVQSYRRFKDKDVLISGGGNTA
                     LDWAHDIAKIAKSVTVVYRKEDVSGHEAMKTLVTDLNVKLCPKTRIKYLVGNDDETHI
                     SEVVLEHVESGDRHTVKFDDVIISHGFDRCNTLLSETSSKLDMHDDCRVKGFGNTTTS
                     IPGIYACGDIVYHDAKSHLIASAFSDGANAANLAKTYIQPDANAEGYVSSHHEVFKEA
                     NKTIVNKHLY"
     gene            complement(15028..15144)
                     /locus_tag="O7798_001359"
     CDS             complement(15028..15144)
                     /locus_tag="O7798_001359"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501117.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDC2863625.1"
                     /translation="MANYAIYFNNININSIMALNDNNYQFEHVNERNEYRES"
     gene            complement(15249..15680)
                     /locus_tag="O7798_001360"
     CDS             complement(15249..15680)
                     /locus_tag="O7798_001360"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501118.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2871 domain-containing protein"
                     /protein_id="HDC2863626.1"
                     /translation="MRRLLYSFLFYMIIGLFSGFFYRELTKAYDFTGTTQLSLVHTHT
                     LILGMFMFLILLPLEKLFKLSSYYLFNWFFYVYNIGVIVTIGMMVTKGFFQVTGKSYS
                     PEAFAGFAGIGHTGMLAGLLLLFFLLRQAILKEPRDESFKK"
     gene            complement(15887..>17129)
                     /locus_tag="O7798_001361"
     CDS             complement(15887..>17129)
                     /locus_tag="O7798_001361"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501120.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="YhgE/Pip domain-containing protein"
                     /protein_id="HDC2863627.1"
                     /translation="PIATMIILVIFSLAFYPAYNPKPKDLPIGILNEDKGTTIQDKNV
                     NIGKKLEDKLLDSDSNKIKWVKVDSEKDLEKDLKDQKIFGVAIIDKDFSKDAMSKTQK
                     VVMDSKKEEMQQKVASGEIPPQVVQQMKQKMGNQQVEVKQAKFKTIVSEGSSLQGSQI
                     ASAVLTGMGDNINAQITKQSLETLTSQNVKVNAADINGLTNPVKVDNEKLNKVKDHQA
                     GGNAPFLMFMPIWIGSIVTSILLFFAFRTSNNIVVQHRIIASIGQMIFAVVAAFAGSF
                     VYIYFMQGVQRFDFDHPNRIAIFVAFAILGFVGLILGVMVWLGMKSVPIFFILMFFSM
                     QLVTLPKQMLPESYQKYVYDWNPFTHYATSVRELLYLNHHIELNSTMWMFIGFMIFGA
                     VSSLVSAIVRKHSTKRTEVPS"
BASE COUNT         5737 a         3095 c         2435 g         5862 t
ORIGIN      
        1 ggttttaaac gtgacttcaa gctatatgaa tgcaacgagc tgtacattat aaaatacata
       61 tcaaaaaagc tgatttctat caaataatta atagaaatca gcttttttac attgcctaag
      121 aacttaatgt cccagcctgt tttttgtaaa cccaaatcgt attctgttat ctaactttta
      181 tactactatg tcttaaatca ttaacattta gcgtctttac aagccactaa tcagttattt
      241 tgccatcttc taattcaatc actcgatctg catattcaaa taatcttcga tcgtgtgtaa
      301 tcataatacc aatcatttgt tgttctttaa tttgttgacg tatcatctca acaacttttg
      361 ttgctctatc ggcatctaaa cttgctgtgg gctcatctgc taaaatgatt ttcggattat
      421 tcataaatgc tctcataatc gcaacacgtt gcttttcacc gccagataac tgatgcggat
      481 atacattcaa gcgatcttct aaaccaatat ttttcaaaag ttgtattgct cttgttgaac
      541 tttgttgttt ggtcattccc gcttcttgac ctacgagtgt caattgctct atcactttta
      601 aataaggaac taaatgtgaa gattgaaaaa taaaaccaat atcttccaat cgtaaatcac
      661 taggacgatg ctgtttatca aacaatggcg catcattgta aagcactgta ccactcgttt
      721 gacttaacaa tccgcctaat atcgttagca atgttgtttt cccagaacca gaggcaccat
      781 ttaaaatgac aaattcccct tgttccactt caaaattaat accttttaaa acttttgttt
      841 cagacaaacc ttctccgaaa tttttgacga tatcttcaac gactaatgcc attattctgc
      901 acctccaatt gcttcgatag gatccacttt aaataatttg ataaatgata gtgaggcacc
      961 taaaatcgct actaatataa atatccccac cattaataaa atattttgcg ttgttaagta
     1021 aaaaggcatc gttaccggca tcataaatga tagtcctact atgatgatca cagcaatacc
     1081 taccccaatt attgttagtg ttaaaatttg taaaactaac gcactcaata aatgtcttgt
     1141 cttaatacca attgctttca aaatgccaat ttgtgatatt ttttgaatcg tcataacata
     1201 gaaaaatgca cttagaacga ttgctgtaat agcaaacaaa ctaacaatca tcatatttaa
     1261 cggtgcttgc tctgcttgat aactcgcaat attacctgtt aaatcttttt cactcacaac
     1321 ttgaacgtca tttattttat taagctcatc acgttgttgt tgtgttaaat ttttcactgg
     1381 ataaaatgcc gtattaacct tattcaatgc attaaatccg ttatcgttca atagcacaat
     1441 ggaactatgc gcatacattg tgtcgtttaa aataccagaa actctataac tagttgaatt
     1501 atttttaaaa tgtaatctat ccccgactct aatgttgtct gcagctaact tatcattaat
     1561 agcgacctca tgagcatttt taggataatc acctttttta agttgtatgc gttgttgttt
     1621 aacgtcattc attgtaatca catcttgttc tttattagat aatttcaatg tttgaatatt
     1681 cattttatat ggttcttgat gaattacctt tttaatttga ttctgttgcg tatcactaag
     1741 ttgcgatttc tcaatttgcg gctctttcat tttttgaaca acatattcat cattatcaaa
     1801 gtgttcaaat aacgaaatat tctccctacc aagcccttga gctaaaccac taataaataa
     1861 caccataata cttaataaaa gaatgattaa tgtgattaaa atataacgaa atttgtaaaa
     1921 cataatctct tttatcgcta atttcatatc gattcacttc tccctatttc ttctttagcg
     1981 tcagtataag gttgaaatat gaactcaata tgaacaattg tttttttacg caaaaatatt
     2041 ttacatgtat aataaatgaa aaagataagg gagtttatag ctatggtgca atgtcttgtt
     2101 gtcgatgacg atcctcgaat cctaaattat atagctagcc atttacaaac agagcacatt
     2161 gatgcataca cacaaccaag tggtgaagct gcattaaaac ttttagaaaa acagcgtgtc
     2221 gatattgcag tggtagatat tatgatggat ggtatggacg gctttcaatt atgtaataca
     2281 ttaaaaaatg attatgatat accagttatt atgttaacag cgcgggatgc acttagtgac
     2341 aaagagcgtg cgtttataag cggtactgac gattatgtaa ccaaaccctt tgaggttaag
     2401 gaacttattt ttagaattcg tgctgtatta cgtcgatata atatcaattc aaattcagaa
     2461 atgactattg gcaacttaac gctaaaccaa tcctatttgg aactccaagt atctaataaa
     2521 acgatgacgt taccgaacaa ggaatttcaa ttattattta tgcttgcagc acgtcctaag
     2581 caaatcttta ctcgtgaaca aataatagaa aaaatttggg gctatgatta tgaaggagat
     2641 gagcgaacag ttgacgttca tattaagcga ctacgccaaa gattaaaaaa attaaatgcc
     2701 acacttacaa ttgaaacagt aagaggacaa ggctataagg tggagaatca tgtttaaaac
     2761 actctatgct agaattgcga tttattccat tacggttatt ttatttagtg cattaataag
     2821 ttttgtatta acaaatgttt actatcatta taatttaaaa gcatctaatg acgcgaaaat
     2881 catgaagacg cttaaagaag caagacaata tgaacaatca gctaaaccaa cgcacattca
     2941 acaatatttc aaacatttag ggcaaatgaa ttaccaaata atgaccattg atcaaaaagg
     3001 tcataagaca ttttatgggg agccatttag agaagatact ttatcacaaa atgctattaa
     3061 caacgtatta aataatcaag attaccatgg tattaaagat aaaccattcg cattattcgt
     3121 aactggattt ttcgacaatg taacagataa tactgttggt attaacttta agacaaaaga
     3181 cggttcaata gcagtattta tgcgtccaga tattggagaa acatttagcg agtttagaac
     3241 attcttagcc gtcttgttaa tgttgttatt atttatctcg atttcattag ttatcgcatc
     3301 aacctattca atcattcgtc cagtaaaaaa gttaaagcta gcgaccgaac gcttaattga
     3361 tggtgatttt gaaacaccta tcaaacaaac acgcaaagat gaaattggaa cattacagta
     3421 tcactttaat aagatgagag agtcattggg acaagttgat caaatgaggc agcattttgt
     3481 acaaaatgta tctcatgaaa tcaaaacacc attaacacat attcatcatt tattaagcga
     3541 gttacaacaa acttctgata aaacattaag acaacaatat ataaatgata tctataccat
     3601 tacaacgcag ctgagcggat taacaactga attgttgctc ttatccgaat tagataatca
     3661 ccaacattta ttattcgatg ataagattca agtcaatcaa ctcattaaag atatcattcg
     3721 acatgaacaa tttgctgctg atgaaaagtc gttaatcatt ttagctgacc tagaatcaat
     3781 caatttccta ggaaatcaac gtttgttaca tcaagcattg agtaatttat taataaatgc
     3841 tattaagtat acagatgttg gtggtgccat tgacatcgct ttgcaacata gtcacaacaa
     3901 tatcattttc acaataagta atgatggttc accaattagt ccacaagctg aagcacgttt
     3961 atttgaacgt ttttataaag tgagcaaaca tgataatagc aatggtttag gtcttgcaat
     4021 tacaaaatcc atcattgaat tgcatcatgg tacaatccaa ttcacacaaa gtaacgagta
     4081 tgtaaccacc tttactatta cactgccaaa taattcactt taatctctac ctcctgaaaa
     4141 aacatttctg tttttatttc aggaggtatc ttttatattg attagcgctt tctagccact
     4201 taacatttaa tttctaccat tcaacaaaat ttaaatatat cgatggtcat ttatggttta
     4261 ataattttga aggaggcatt aacctatgat gaaactcaat ttatttatca atgcaaatga
     4321 gacggaatct tatattgata tacatgcacc taaaatgaat gataacgttc aaagtattat
     4381 taatgcagtc aatgatttag acaaatcaca tacattagtc ggatacatag acaaagaaat
     4441 ccatatcatt aatgtatcag atgttataac attccaagtt attaataaaa atgtaacagc
     4501 cattacaagc aatcaaaaat tcaaactaaa attacgactt tatgaactag aaaaacagtt
     4561 accacaacat ttcattcgca tttccaaatc agaaatcgtc aacaagtatt acattgaaaa
     4621 attattatta gagccaaatg gacttatacg tatgtatctt aaagatgcac actacaccta
     4681 ttcttctaga cgttatttaa aatctataaa ggagcgctta tcaatatgaa aaatttgaaa
     4741 aactcattat ttattagctt aatcattggt ttgtcccttt cactgttctt tagtatgtta
     4801 tttgcagacg gcaaatatta tccactgaac ccacaatcaa ctattggcat attgtattat
     4861 acgcatttca cagaaactac cgtaatgttg atttctatca ttttatggtt actcataggc
     4921 gtcgtctttt tccttggaga ttttatcttt aaatacacag attggagcat tactaaagca
     4981 actataatgc atttcataac aacgtatgtc ggattcttgc ctttagcaat gcttgccggt
     5041 tggtttccac taacagtgca ttatctaatc atattcacaa ttatcttcat tgtggtttat
     5101 gtattaattt ggataattca attctttaaa aacaagaact acgtagacac tattaacaag
     5161 caactgaaac aattaaaatg atttttatta accactaaaa aacggtaatg tctatcacat
     5221 taaaaaagac attaccgttt cgtttattat ttaacttgta aatacttagt tacttcttca
     5281 ttaattttat gatataaatc ctcatgatct gttaagcgat aaccaaatga cggcaccatt
     5341 tctttaatct ttggttccca tcctttgaat tcatcacgat agcatctctg taaaacatca
     5401 aacataatat ctacagctgt tgacgcacca ggtgatgcac caagtaatgc agctaatgtg
     5461 ccatcatctg acgtaataac ttcagtacca aattgtaagt tacctttaga atcctcagta
     5521 tccttgatta cttggacacg ttgccctgct gtaatcactt cccaatcttc atttttagca
     5581 tttgggaaaa agactcttaa atcatccata cgctcatcat tagataacat caattgtgac
     5641 actaaatact tcgtaagact catttctttg atacctgcag ataacatcgt cacgatatta
     5701 tttggtttaa ccgatttaat taaatccata tgtgaacctg tttttaaaaa tttaggtgag
     5761 aaacctgcaa atggaccaaa taacaatgaa cgcttgccgt ctacaaaacg tgtatctaag
     5821 tgcggcactg acattggtgg cgcacccact gctgcttttc cgtacacttt agcatgatga
     5881 cgatcaatca cttcttgatt tgtacagcgc aggaataatc cacttaccgg gaaaccacca
     5941 atatgttttg attgtttaat cccagtcttt tggagtaatg gtaaactcgc accgccagca
     6001 ccaataaata caaaatcaga ttcatatgtt gtcgtttcat tagtttctaa atctttaact
     6061 ttaactagcc ataccccaga tttctgtttc ttgatgtcta atacattctg cttatattga
     6121 attcccacac cacgttgctc taaattatca aataactttg cagttaacgc accaaagtta
     6181 acatctgtac cagtttcatc ataagttaaa gcaattggtt catcagactt acgaccttca
     6241 atcattaacg gtacccaaga tttcatttct tcttcatctt gcgataattt cattttttcg
     6301 aataaaatac ttttctttaa cgttgcaaca cgacttttta taaaagctac attatcttcg
     6361 ccaatgacaa aactcatgtg tggcaccgct tgaataaagc gatctgggtt atctaattgt
     6421 cctgttttaa ctaaatatgc ccaaaactgt tttgaaattt ggtactgctc atttatctta
     6481 attgctttac tacaatcaac tgtgccatcc ttaccttctt ttgtatagtt caactcgcaa
     6541 agtgctgaat gccctgtacc ggcattattc catacatttg aactctcttc gccaggttgt
     6601 gctaattttt caaacacttt aatatttttc tcaggtgata attctttaag taatgttcct
     6661 aatgttgcac tcataatacc gccaccaatt aagatgacat ctgttttgct atgttgtgtt
     6721 gtcataacaa atacagtccc cctttttaaa atgaataatg gaacgttcga gaaatacgac
     6781 atattaatac cactttaaat caataagtgt ctcaataggt tcccatgatg atgctctatt
     6841 actatctact atgtatatta atattttata ataacgaaac tactttaatt atatacttta
     6901 tgtgcgatag cacaaagaca aaaccacaaa ccttaacagc tatcaaccaa tttaatttga
     6961 ttgctgatta ctcactattc attttaacat aaagcgctac cattattata atgtcaaact
     7021 tctttcatta atgatccata aaaaaaagat gagatgttag aaaacatctc accttctgta
     7081 tatttatatt ttgaaatacg tttttttata ataatgacaa gatgaaagtc caaatacaga
     7141 tgaatattag taaacataca ctgtatttca atgtcatttt taataattct gattccttac
     7201 caacttgttt tactgctgca gttgcaattg caattgattg tggtgaaatc aattttgccg
     7261 ctacaccacc aactgtatta gcagatacaa gaagtgaacc acttgttcca atttgttgtg
     7321 caacagaagc ttgaattggt gcaaataatg agttgttatt tacaactgat cctgtcataa
     7381 acacacctat ccaacctaaa attggtgata gaactgggaa gacattacct gctttagcaa
     7441 taccttgacc cattgctgca cttaaaccac cataagttgt gattttagaa attgctaaga
     7501 tgaaacaaat tgtaagaact ggtaaccaca actctttaaa tgtaacgccg aataatctac
     7561 ctgcatcttt aaagttaacc tttttagaca ttaaaattgt aataataata gttaataaaa
     7621 tagctgtacc tgtttgtcca ataatattta aagtcaatac taatggttta tgcgtaactt
     7681 cgctgattgt tccaggtaag ttgaatttaa atactaatga tgataaagca ccatttggta
     7741 agaataagtt tttaaagaat ggcgcactcc aaatcattac aatgactgtt aatacaatga
     7801 atgggctcca tgcatgtaat actgcttttg cagaatgtgc ttttgcaggt tcaatttctt
     7861 catctttatt aacacgataa atgtgttttg gttggaattt tttagaaaat actgctaatg
     7921 ctaacattgt taataacggt ggaataatat ctgctaattc aggtccactg aatacagtta
     7981 ataatccttg agtaagtgta taagtgattg aaactactaa aattgctggt aatgtttctt
     8041 taacacctct aaaaccatca ataataaaga taagtaagaa tggaataatg aaatttatga
     8101 ttgccaatgt taaagttgct gattgagaaa cacctaatac tgaaacatct ccaggtaatt
     8161 tcaacgtttc tacaacacct acagggatac caatcgcacc aaaagcacca gacgctgcat
     8221 ttgcgactaa acataacatc gcagctttta atggattaaa tcctaattgt gttaataaaa
     8281 gtgcacaaat tgcaattggt acaccaaatc ctgctgcacc ttctaaaaat gcgttgaatg
     8341 caaatccaat aagtaaaact tgaatacgtt ggtcttgtga aatatttgta atactatctt
     8401 gaattgttaa aaattgtcca gattcaacag taattttgta taacaatact gccatcataa
     8461 cgatatagcc aatcggaatg ataccttgga agaaaccttc gactactgca ccagaagcga
     8521 taccaactgg caatttgaaa aatggtattg caattagtaa tgttacaaca agtgttgtaa
     8581 tagctgcata aatacctttc attttaaaaa cagttaaaca tagtaaaaac agtacaatcg
     8641 gtattgctgc aattaaagac gataataata aattatcaaa tgggttaaac gtatttacta
     8701 acataggctg actcttcttt ccataaagta gtagtgtaat tgcttcatta aaatcatgct
     8761 ctggctatag cattttgtta tcgataacat tttacagaac agtgagatta atgtgatttt
     8821 tttcacaatt aaaatatacc attttttcag actattaaca atatcacttt cctatttaat
     8881 tgttttattt ttcattttaa atctgttcat caaaatgaat tgtacttaat gtaatgaagt
     8941 aacttatact attcatgaat tttacataag accgtgctaa aataaggaag atactacgat
     9001 gaggaatgga agttatagca atgattaaac agataaatgt ttctaatatg caaaagtttg
     9061 aatctcaatt aatgaaagct cagtctgaag gttatacaca tgtcgttcca tatgccaatg
     9121 agataatgat ttatcaatcg atgttagatg cggttcaatt atatcctaag tctatcgtgg
     9181 ttgattatac tgtggatgga caatacaaaa atgattgtca ctatttcggt caatcatcga
     9241 tcaacattgc cgattgggct caaaacaata attattatcc taacctgata tatgcgattc
     9301 aacagactct tgatttaata cattattact ctgtagaaac gattttcgat ttagctttat
     9361 tgacacttct gaaaggtgat ttatcaatcg atggtcatgt cgtttttgat tttaaagccc
     9421 ctatagcaac aagtgcttca atatgggaaa ctattaaaac tattgaagat tttgatatga
     9481 tgtctcagtt ttatttgaat aaaatggctt atattgatca tcatcctata ccttttcgca
     9541 acctttttat cgaggattca gaacaactta attcgccaga taattggttg tattctacca
     9601 agtttatgct acctaaatgg ttatataaaa tagcaaagca acgtgctgat aacaaacaat
     9661 tacaaaactt cggcctgtat acgaagcaac caaacgtttt aaaagatcac atcgttttta
     9721 tcggtgatca tcatcaatat ataggtaatt caaaatattt atttacttac ttcgttaaac
     9781 ataatccaat gactgcctgt tattttgtta ctgacgatcg tcgcggacca catttcatat
     9841 cacctaagtc tgaaaaagct gacgaattga ttaacagcgc acgcgtagtt atagttgaaa
     9901 atgatatacc tgaaacgtta caaccaaacg gtactttaat tcaattacat caaggcacac
     9961 caataatgca attattttta gatagtaaag agcctattaa aaatatagaa acaccttttt
    10021 atcgtgctaa aaggtataat cgctggttgc aattcgatta tgttatacat tctgctgatg
    10081 atattagcca cttttatcaa acggcttttc ctagtcacca agcaaatgta ttggcttatg
    10141 gtaatcctaa acaccaatat ttactacaaa agagtaacga aagtactact caacaacagt
    10201 ttaagaaatc gtttaaaata aatgatcaaa aaccagtttt attatacgca cctattggat
    10261 tagtgagtgc gcaacaatta ccactatcag atgctttatt caaagcctat catgttgtgg
    10321 ttcagggtgt tgatgaagcg atcttaccag aagaggcgct tgttgcacca aagtatctta
    10381 gtgctcaaga cttaattcta atgtctgatg tcgttatcac tgattactca aatataatat
    10441 ttgatgcgat ggctatagac aaaacagtag cattatacac tccaaatcac agtcaataca
    10501 ttgagtctca aggtgttaac gaagatattt ggcgtcatct atcaaaaatt tggtatacag
    10561 accgacaatt attaattaat aatttaattt cccaggcaat accagtgatt aaatatccac
    10621 aaatacaaca taaagaacaa ccattagaat ctatttcaca acttatattg tctaagatga
    10681 catctaatca atagtgttta aatttctcag tggctgtgaa tgaggtttaa aagtactata
    10741 aaacgtaaac tttgatactt taaaatacgc aaaaaacggt aaaccctaat tcatattata
    10801 gagtttaccg ttttattttt taacttgcat catagttata ttaacattat tgttggtagt
    10861 ttggatcagt aaccattgct tgtccagtat aatcaaccgt tacaattgaa tattttccat
    10921 ttgcatttgg gtctttaaaa ctaaacacat acttatagtt gccattatgt tcttcaatag
    10981 aataatcatt atacacttta ttattactac caaatttatt tgcttcatta ttagccgcat
    11041 ttaaagctgt ttggaaattt ggcaattgct gtaaagcttg atttttattt ccattaaacg
    11101 gataaatttg acgtgcaacc ggcgcggcat tttgtccata atatggtgca acgtaacttg
    11161 atttttgatt attattcgct tggttattac ttgattggtt attatttgtt tggttttggt
    11221 cattgtttgt tgcatttgaa ttagattgtt gctggttatc gtttgcacta ttatctttat
    11281 tatctttgtt tacgtcttta ctatcatctt tattatcttt cttatcttta gatgaatcat
    11341 ttgttttttt atcttgttgt tcagttttcg ctttatcatc tttttcttta ttaccgtctt
    11401 tttgttggtc actatcttga ccacatgcag ctaaaaataa tgataatgct agtaaccctg
    11461 taactaatct tttcatacat atctcctcct ataattcgat attcattgaa taatcttgaa
    11521 atacatatct accatgtgta tcttttcatg gcttgttacc aaagacgtca acattaatat
    11581 gatctgaatt atcacaatat ccataactac aatctaaggt tctttttatt ataccctaat
    11641 ttttgttcat tattatttaa tttttgtgaa ttttatgttt tctataaatt taattatttt
    11701 actttaacaa ttcattacgc atttagcatt tcaaggtata cacaatattt attactatga
    11761 tttcatttta tctgctgcaa aaacaatcat tataactctt tttccataat taaatctgta
    11821 tccgttacat cacctgtttg aaaatgatgt tcaccaacca ctttaaatcc atgacgttta
    11881 taaaatgctt gagcacgagg attatgctcc caaactccta gccaaatttt atgtttatta
    11941 tgttcttgag caattttttc ggccaattct atcaattgtg aacctcttcc gccaccttga
    12001 aagtctttca aaaaatatat gcgctgcact tctaaatagg cctcccccat ttcttcagtt
    12061 tgagcactat taatattcat ctttatataa ccaacattcg caccatcttc ttgataaaaa
    12121 taatgaaatg aatctacatg gttaatctct tgtgtaaatt tttctacagt ataattgtct
    12181 ttaaaaaatt gatcaaaatc tttgtcatca tagtaagaac caaacgtgtc ataaaatgtt
    12241 ctagttgcta attcaactaa ttcactagca ttttgttctg aaatttcttt gattatccca
    12301 gccatataaa tcctccaata aacagtgatc gaatcaaaat attacttatg ttatttttca
    12361 gccaaaacta tttaaaaata cattaacaca aatcaattac aaattgtatt gattgtgtgt
    12421 aacatcaata aatgatacat ttattccagt aaaatggccg tattttcaaa agagaaaaag
    12481 agaggatgta tcgttgtgat agaaacattt aaagcgtttg taattgataa agatgagagt
    12541 ggtaaagtga caccaacttt caaacaatta tcgcctactg atttacctaa aggagatgtg
    12601 ctgattaaag tacattactc tggtataaat tataaagatg ctttagcgac tcaagatcat
    12661 aatgcagtcg taaaatcgta tcctatgatt ccaggaatag atttagctgg aacaattgtt
    12721 gaatccgaag caccaggctt tgaaaaagga gaacaagtaa ttgtaacgag ttatgaccta
    12781 ggtgtcagcc attatggcgg ttttagtgaa tatgcgcgtg taaaatcaga atggattatc
    12841 aagcttcctg atactttaac attagaagaa tcaatgatat atggcacagc tggttatact
    12901 gccggtttag caattgaaag acttgaaaaa gttggaatga atattgaaga tggtcctgta
    12961 ctcgttcgcg gtgcttcagg tggtgtcggt actttagcag tactcatgct taatgaactt
    13021 ggttataaag ttatcgcaag tacaggtaaa caagatgtta gcgatcaatt acttgaactt
    13081 ggtgccaaag aagttatcga tcgacttcct gttgaagatg atcataaaaa gccactcgca
    13141 tcatcaactt ggcaagcttg tgtagaccct gttggtggcg aaggtattaa ttatgttaca
    13201 aagcgtttaa atcatagtgg gtcaattgca gttattggta tgactgccgg taatacttat
    13261 actaattctg tattccctca cattttaaga ggtgtaaaca ttttaggaat tgactcggta
    13321 tttactgcta tgaaattaag acagcgcgtt tggcgtcgtc tcgcaaaaga tttaatgcct
    13381 gaaaatttac atgagatcaa gcaagttatt acatttgatg aacttccaga acaacttaac
    13441 aaagtaatta aacatgaaaa taaagggcgc attgttatcg atttcggtgt agataaatag
    13501 tattcatgaa aaagacatcc cgttatgcga gatgtctttt ttaatttagt atttgatata
    13561 cataccgcct gaatctggtt cggtaggtat aaatccaaat tttgtatata atttatccgc
    13621 tgggtagtct gcaatcagac taacgtatgt actctcaaca gccacacctt taatatattg
    13681 cataatatgc tccataatta gactgccgta accttgacct tggtgacttt tcaaaactgc
    13741 aatatcaaca atttgaaaaa cagttccgcc atcgccaatc actctaccca taccaattaa
    13801 ccgatcttta tcatacaagg ttactgtaaa taaggcatta ggtaatcctt tttcagctgc
    13861 ttcgcgcgtc tttggactca tacctgcgtt aatccttaat gcgcaataat cctcgcaagt
    13921 cggaatatca tatgtcactt taaccattat ttaccccact tttcatcaca caatatatca
    13981 acctagtata aatgtttatt tacaatagtc ttattcgctt ctttaaacac ttcatgatga
    14041 cttgaaacat aaccctctgc attcgcatct ggttggatat atgttttagc aaggttcgct
    14101 gcatttgcac catcactaaa tgcacttgca attagatgtg attttgcatc atgataaaca
    14161 atatctccac acgcatagat accaggtata ctagttgtcg tattaccaaa tcctttaaca
    14221 cgacaatcat catgcatatc tagctttgaa gatgtttcac tcaataatgt attacaacga
    14281 tcaaacccat gactaataat gacatcgtca aatttaactg tatgcctatc gccactttca
    14341 acatgttcca aaacaacttc acttatatgc gtttcatcat cattgccgac caagtattta
    14401 atacgtgttt ttgggcatag tttcacattt aaatctgtca ccaacgtttt catcgcttca
    14461 tgaccactta catcttcttt tcgataaaca actgtcacgc ttttagcaat cttggcaata
    14521 tcatgcgccc aatctaatgc tgtatttcct ccacctgata ttaatacatc tttatctttg
    14581 aaacgtctgt aactttgtac aacataatgt aaattagtta attgatatct ctctacacct
    14641 ttaacatcta attgttttgg attaataata cccgcaccaa ttgcaatgat aactgctttc
    14701 gatgtatata tttctcccgc ttctgtttca acttcgaaat gacgttctgc ctttttccta
    14761 atatctacca cacgttcatt caaatgaact tccggtttaa aatataatcc ttgcttaatt
    14821 gtatctttta aaatttcatg acaaggtttt ggcgcaatgc cgccaatatc ccaaataatt
    14881 ttttcagggt aaattctcat cttaccccct aattcagatt gaacatctat caatcttaca
    14941 gacatatctc gcaatccagc ataaaagctt gcatacaaac cagacggacc gccaccaatg
    15001 attgtaacat ctttcattat gtgcctccta tgactctcta tattcatttc tttcattaac
    15061 gtgctcaaat tgataattat tatcatttaa agccattata ctattaatat ttatattgtt
    15121 aaaataaatc gcatagttag ccatgaatta tcaataacta tcccatcaca atataaaaac
    15181 acacctttca aagtaagaaa caacaatgtt cctttgaaag atgtgtatat tttttagttc
    15241 tagttatatt attttttaaa agactcatca cgtggttctt taagaattgc ttgtcttaaa
    15301 aggaaaaata gcaacaataa acctgcaagc atacctgtgt gcccaatacc tgcaaagcct
    15361 gcaaatgctt ctggagagta tgatttacca gtgacttgga agaatccttt tgtcaccatc
    15421 atacctatag taacgataac acctatgtta tatacataga agaaccagtt aaataagtag
    15481 taacttgata atttaaataa cttctccaat ggtaataata ttaaaaacat aaacatacct
    15541 aaaataagtg tatgtgtgtg tacaagtgat aattgtgttg taccagtaaa atcatatgct
    15601 tttgttagct ctctatagaa aaagccacta aataaaccta tgatcatata aaaaagaaat
    15661 gaatataata acctacgcat tttgaatcct ccctcacctt ttcattatat ccgattatac
    15721 ctattataac agtgacaaaa aagcgaagat atgacacaac tgaatttggt ttagcacata
    15781 gtatgacagc taaaataact ttacatcaag cgctatacaa ataaaatagc tataccatga
    15841 cgctcgctac aaacgtcttg tatagctatt atttctattt attaaattat gacggcactt
    15901 cagtacgttt tgtgctatgt tttctaacaa tagctgaaac taaacttgat acagcgccaa
    15961 aaatcataaa ccctataaac atccacattg tactatttaa ttcaatatga tgattcaagt
    16021 ataatagttc tcttacactt gttgcatagt gtgtgaatgg attccaatca tatacatatt
    16081 tttgataact ttcaggcaac atttgtttag gtaacgttac aagttgcata ctaaagaaca
    16141 ttaaaatgaa gaaaattgga actgacttca tacctagcca taccataaca cctaaaataa
    16201 ggcccacgaa accaagaatc gcaaatgcta caaaaattgc gatacgattt ggatggtcaa
    16261 aatcaaatct ttgaacgcct tgcatgaaat aaatataaac aaagctacct gcaaatgctg
    16321 caacaactgc aaatatcatc tgtccaattg aagcaatgat acgatgttgc acgacgatat
    16381 tgttactagt tctaaatgca aagaacaata agatagacgt tacgattgaa cctatccaaa
    16441 ttggcataaa cattaggaat ggtgcattac cacctgcttg gtgatcttta actttattaa
    16501 gtttttcatt atccactttt actggattcg tcaaaccatt gatgtccgcg gcattgactt
    16561 taacattttg actcgttaat gtttccaaac tttgcttcgt aatttgagca ttaatattat
    16621 cacccatacc agttaacaca gctgatgcaa tttgtgaacc ttgtaagctt gatccttcac
    16681 ttacaatcgt tttaaattta gcctgcttaa cctctacttg ttgattcccc attttttgtt
    16741 tcatttgttg aaccacttgt ggcggaattt cacctgaagc aactttttgt tgcatttctt
    16801 cttttttact atccataact actttttgtg ttttactcat agcatctttt gaaaagtctt
    16861 tatcaataat agctactcca aagatttttt gatctttcaa atctttttca aggtcttttt
    16921 cactatcaac cttaacccat ttaattttat tagaatcact atctaataat ttatcctcta
    16981 attttttacc aatgttaaca tttttatctt gaatcgttgt acctttatcc tcgtttaata
    17041 taccaattgg taaatctttt ggtttaggat tatatgcagg ataaaaagct aaagaaaaga
    17101 ttaccaagat aatcatagtt gctattggt
//
LOCUS       DALPQQ010000050        16974 bp    DNA     linear   BCT 22-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus strain K18-6-464
            SAMD00233528-rid16434743.denovo.050, whole genome shotgun sequence.
ACCESSION   DALPQQ010000050 DALPQQ010000000
VERSION     DALPQQ010000050.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMD00233528
            Sequence Read Archive: DRR236061
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 16974)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 16974)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001543423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001543423.1
            Genome Coverage       :: 77x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/22/2022 17:09:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,811
            CDSs (total)                      :: 2,743
            Genes (coding)                    :: 2,689
            CDSs (with protein)               :: 2,689
            Genes (RNA)                       :: 68
            rRNAs                             :: 2, 4, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 4, 2 (16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 54
            CDSs (without protein)            :: 54
            Pseudo Genes (ambiguous residues) :: 0 of 54
            Pseudo Genes (frameshifted)       :: 27 of 54
            Pseudo Genes (incomplete)         :: 27 of 54
            Pseudo Genes (internal stop)      :: 10 of 54
            Pseudo Genes (multiple problems)  :: 10 of 54
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..16974
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMD00233528-rid16434743.denovo.050"
                     /strain="K18-6-464"
                     /db_xref="taxon:1280"
                     /geo_loc_name="Japan: Niigata"
     gene            54..1160
                     /gene="rpoD"
                     /locus_tag="O7798_001362"
     CDS             54..1160
                     /gene="rpoD"
                     /locus_tag="O7798_001362"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011275651.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase sigma factor RpoD"
                     /protein_id="HDC2863628.1"
                     /translation="MSDNTVKIKKQTIDPTLTLEDVKKQLIEKGKKEGHLSHEEIAEK
                     LQNFDIDSDQMDDFFDQLNDNDISLVNEKDSSDTDEKLNPSDLSAPPGVKINDPVRMY
                     LKEIGRVNLLSAQEEIELAKRIEQGDEVAKSRLAEANLRLVVSIAKRYVGRGMLFLDL
                     IQEGNMGLIKAVEKFDFNKGFKFSTYATWWIRQAITRAIADQARTIRIPVHMVETINK
                     LIRVQRQLLQDLGRDPAPEEIGEEMDLPAEKVREILKIAQEPVSLETPIGEEDDSHLG
                     DFIEDQEAQSPSDHAAYELLKEQLEDVLDTLTDREENVLRLRFGLDDGRTRTLEEVGK
                     VFGVTRERIRQIEAKALRKLRHPSRSKRLKDFMD"
     gene            1291..1968
                     /locus_tag="O7798_001363"
     CDS             1291..1968
                     /locus_tag="O7798_001363"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500172.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA (adenine-N(1))-methyltransferase"
                     /protein_id="HDC2863629.1"
                     /translation="MISLNNRLTTVSRFLKQGTIADIGSDHAYLPIYAIQNHLCECGI
                     AGEVIQGPFQAAVKNVAANQLVDRIDVRLGDGLSVIQPEDVIDNITICGMGGPLIAKI
                     LKDGQDKLSQHPRLILQSNIQTENLRQTLQQLNYEIIDEIIMEEKGHIYEIVVAEYST
                     ELIELSSDELKFGPKLLNNKNEYFIKKWQRELEALYHIKSKLNTEQHHQRLAQINDEI
                     AVIERVL"
     gene            1971..3071
                     /locus_tag="O7798_001364"
     CDS             1971..3071
                     /locus_tag="O7798_001364"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500171.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Nif3-like dinuclear metal center hexameric
                     protein"
                     /protein_id="HDC2863630.1"
                     /translation="MKIADLMTLLDHHVPFSTAESWDNVGLLIGDEDVEVTGVLTALD
                     CTLEVVNEAIEKGYNTIISHHPLIFKGVTSLKANGYGLIIRKLIQHDINLIAMHTNLD
                     VNPYGVNMMLAKAMGLKNISIINNQQDVYYKVQTYIPKDNVGPFKDKLSENGLAQEGN
                     YEYCFFESEGRGQFKPVGEANPTIGQIDKIEYVDEVKIEFMIDAYQKSRAEQLIKQYH
                     PYETPVFDFIEIKQTSLYGLGVMAEVDNQMTLEDFAADIKSKLNIPSVRFVGESNQKI
                     KRIAIIGGSGIGYEYQAVQQGADVFVTGDIKHHDALDAKIHGVNLIDINHYSEYVMKE
                     GLKALLMNWFNTEKINLDVEASTINTDPFQYI"
     gene            3185..4531
                     /locus_tag="O7798_001365"
     CDS             3185..4531
                     /locus_tag="O7798_001365"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500170.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DEAD/DEAH box helicase"
                     /protein_id="HDC2863631.1"
                     /translation="MAKHPFEQFNLESSLIDAVKDLNFEKPTEIQNRIIPRILKRTNL
                     IGQSQTGTGKSHAFLLPLMQLIDSEIKEPQAIVVAPTRELAQQLYDAANHLSQFKAGV
                     SVKVFIGGTDIEKDRQRCNAQPQLIIGTPTRINDLAKTGHLHVHLASYLVIDEADLMI
                     DLGLIEDVDYIAARLEDNANIAVFSATIPQQLQPFLNKYLSHPEYVAVDSKKQNKKNI
                     EFYLIPTKGAAKVEKTLNLIDILNPYLCIIFCNSRDNANDLARSLNEAGIKVGMIHGG
                     LTPRERKQQMKRIRNLEFQYVIASDLASRGIDIEGVSHVINFDVPNDIDFFTHRVGRT
                     GRGNYKGVAITLYSPDEEHNISLIEDRGFVFNTVDIKDGELKEVKAHNQRQARMRKDD
                     HLTNQVKNKVRSKIKNKVKPGYKKKFKQEVEKMKRQERKQFSKQQNRQKRKQNKKG"
     gene            4541..5431
                     /locus_tag="O7798_001366"
     CDS             4541..5431
                     /locus_tag="O7798_001366"
                     /EC_number="3.1.21.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500169.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="deoxyribonuclease IV"
                     /protein_id="HDC2863632.1"
                     /translation="MLLGSHVSMSGKKMLEGSAIEAHEYGETTFMIYTGAPQNTRRKS
                     IEDLNITKGHEVMEKYGLSNIVVHAPYIINIANTTKPETFNLGVDFLQQEIERTQAIG
                     AKDIVLHPGAHVGAGVDAGINKIIEGLNEVLTNDNNVRIALETMAGKGTEIGRSFEEL
                     ARIIDGVHNNERLSVCFDTCHTHDAGYNVKEDFDGVLNEFDKIIGVDRIKVVHVNDSK
                     NDRGAQKDRHENIGFGYIGFDALNYIVHHDSFKDIPKILETPYVGEDKKNKKPPYKLE
                     IEMLKQQQFDPELKNKVMQQ"
     gene            5575..6342
                     /locus_tag="O7798_001367"
     CDS             5575..6342
                     /locus_tag="O7798_001367"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000189275.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metal ABC transporter ATP-binding protein"
                     /protein_id="HDC2863633.1"
                     /translation="MTPVFELKNVNYYYDHKKVLENINIKINKGEFLAIVGPNGAGKS
                     TLLKLILGLLPLQSGEIFVEGIDFKNKKTSIKLSYVSQKANAFNSGFPASVKEVVLSG
                     LTKTKRLFQTFNSKDNEKVIKVLERLNISDLIHKNIAELSGGQQQRVMIARALISEPA
                     VLVLDEPTNGIDAKHVSEFYNTLDQLKQEGITIILVTHDIGVVADTATEVACLNKHLH
                     FHGTTDEFKSLDEVEISKIYGHPVRFVDHQHNRECCN"
     gene            6384..7247
                     /locus_tag="O7798_001368"
     CDS             6384..7247
                     /locus_tag="O7798_001368"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500167.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metal ABC transporter permease"
                     /protein_id="HDC2863634.1"
                     /translation="MIDALLNFDFMRYSLISGILIGFIAPLIGAFIVVRRLSLIADAL
                     SHVTLGGISFGMFLLTIMPTLVFINPMWFGILFAIVGALLIEKLRTSYTAYQEIAIPI
                     IMSAGIALSAIFISLADGFNQEIVGLLFGSISAVNISDLTTIIVIAIIVVLFITLFYK
                     ELFILSFDEEYSKVIGIPKWIQFLFIVIVAMVISASMRVVGILLVSALITLPIAISMR
                     ITKSFKQLILLSVFLGELSVILGLVLAFYMDISPGGVIVVLLVILLMITMAYQKMRMK
                     FKKGANINEYK"
     gene            7234..7644
                     /locus_tag="O7798_001369"
     CDS             7234..7644
                     /locus_tag="O7798_001369"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500166.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional repressor"
                     /protein_id="HDC2863635.1"
                     /translation="MNTNDAIKILKENGLKYTDKRKDMLDIFVEEDKYINAKYIQQVM
                     DENYPGISFDTIYRNLHLFKDLGIIENTELDGEMKFRIACTNHHHHHFICEKCGDTKV
                     IDYCPIDQIKLSLPGVNIHKHKLEVYGVCESCQD"
     gene            7920..8519
                     /locus_tag="O7798_001370"
     CDS             7920..8519
                     /locus_tag="O7798_001370"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500165.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="superoxide dismutase"
                     /protein_id="HDC2863636.1"
                     /translation="MAFELPKLPYAFDALEPHFDKETMEIHHDRHHNTYVTKLNAAVE
                     GTDLESKSIEEIVANLDSVPANIQTAVRNNGGGHLNHSLFWELLSPNSEEKGTVVEKI
                     KEQWGSLEEFKKEFADKAAARFGSGWAWLVVNNGQLEIVTTPNQDNPLTEGKTPILGL
                     DVWEHAYYLKYQNKRPDYIGAFWNVVNWEKVDELYNATK"
     gene            8640..10715
                     /locus_tag="O7798_001371"
     CDS             8640..10715
                     /locus_tag="O7798_001371"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500164.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="penicillin-binding protein 2"
                     /protein_id="HDC2863637.1"
                     /translation="MLKRLKEKSNDEIVQNTINKRINFIFGVIVFIFAVLVLRLGYLQ
                     IAQGSHYKQIIKNDENITVNESVPRGRILDRNGKVLVDNASKMAITYTRGRKTTQSEM
                     LDTAEKLSKLIKMDTKKITERDKKDFWIQLHPKKAKAMMTKEQAMLADGSIKQDQYDK
                     QLLSKIGKSQLDELSSKDLQVLAIFREMNAGTVLDPQMIKNEDVSEKEYAAVSQQLSK
                     LPGVNTSMDWDRKYLYGDTLRGIFGDVSTPAEGIPKELTEHYLSKGYSRNDRVGKSYL
                     EYQYEDVLRGKKKEMKYTTDKSGKVTSSEVLNPGARGQDLKLTIDIDLQKEVEALLDK
                     QIKKLRSQGAKDMDNAMMVVQNPKNGDILALAGKQINKSGKMTDYDIGTFTSQFAVGS
                     SVKGGTLLAGYQNKAIKVGETMVDEPLHFQGGLTKRSYFNKNGHVTINDKQALMHSSN
                     VYMFKTALKLAGDPYYSGMALPSDISSPAQKLRRGLNQVGLGVKTGIDLPNETRGQIE
                     PLTNNPGNYLDLSIGQYDTYTPLQLSQYVSTIANDGYRIQPHIGLTIHESTNKDEVGP
                     LKKKINGTVLNKVNNTEKEIKQIQEGFKMAFNDKDGTGYVSFKDTVVPTAGKTGTAEV
                     FQNGEPRVNSTYIGYAPIDDPKLAFSIVYTNQPVPPPWLTGGDLGRDVINYYFKQLGK
                     DDKNKDKDK"
     gene            10828..10977
                     /gene="rpmG"
                     /locus_tag="O7798_001372"
     CDS             10828..10977
                     /gene="rpmG"
                     /locus_tag="O7798_001372"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001265708.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L33"
                     /protein_id="HDC2863638.1"
                     /translation="MRVNVTLACTECGDRNYITTKNKRNNPERVEMKKFCSRENKQTL
                     HRETK"
     gene            11186..11725
                     /locus_tag="O7798_001373"
     CDS             11186..11725
                     /locus_tag="O7798_001373"
                     /EC_number="6.3.3.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500162.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5-formyltetrahydrofolate cyclo-ligase"
                     /protein_id="HDC2863639.1"
                     /translation="MTKNEIRKYILHKMKNFNKAEKRKADTWLRNQFFATEEYKEANA
                     IALVLSFNHEVDTFSIIEQALMDHKRIFVPKMDYLNHQMTFKEIFNLKDIDVDNKGIY
                     YPTSKGETTNNLDLIVVPGVGFQDDGYRIGYGGGYYDRFLANYQTKTISLLYDFQITS
                     FEPESFDQPVDKLIIYQAA"
     gene            11737..13200
                     /locus_tag="O7798_001374"
     CDS             11737..13200
                     /locus_tag="O7798_001374"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001652331.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rhomboid family intramembrane serine protease"
                     /protein_id="HDC2863640.1"
                     /translation="MNIDKQFWKTIYYWIRYLNFDIVSREKDDQEIWLAHKRKKQVVI
                     FKQHIKSTQEIRFDKAKVLEHKDEIANFISFEPQSFEFYYFTESEFSEEQLNEVSPIR
                     IKFNVIRHTKDLIKHMPNIFLARLISEDNDKKTYMFYKRKVLTDNFLDKYMQKFSPAT
                     YTIIFVNVLIWLCMILYLNNFSDVKLLDVGGLVHFNVVHGEWYRIVTSMFLHFSFEHI
                     LMNMLSLFIFGKIVEAIIGSWRMLTVYFIAGLFGNFVSLSFNTTTISVGASGAIFGLI
                     GSIFAMMYVSKTFNKKMLGQLLIALVILVGVSLFMSNINIVAHIGGFIGGLLITLIGY
                     YYKVNRNIFWILLIGMLVIFIALQIRIFTIKEDNIYNKLIKDDMTSGNYDNAQNIVKQ
                     TINKNYADDQTYYLSGMIMATINSKSEGMTEWERGLRMFPKSGLLNFELAIANRSLND
                     DEKALKYVRKALNADPKNTDYINLEKELTKSNESKNK"
     gene            13181..13384
                     /locus_tag="O7798_001375"
     CDS             13181..13384
                     /locus_tag="O7798_001375"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500159.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YqgQ family protein"
                     /protein_id="HDC2863641.1"
                     /translation="MSRKINNFYDVQQLLKSYGFLIYFKNPEDMYEMIQQEISSLYQY
                     ELLSKEEYLKCTLIINQRRNEQK"
     gene            13381..14367
                     /locus_tag="O7798_001376"
     CDS             13381..14367
                     /locus_tag="O7798_001376"
                     /EC_number="2.7.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500158.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ROK family glucokinase"
                     /protein_id="HDC2863642.1"
                     /translation="MTKIILAADVGGTTCKLGIFTPELEQLHKWSIHTDTSDSTGYTL
                     LKGIYDSFVEKVNENNYNFSNVLGVGIGVPGPVDFEKGTVNGAVNLYWPEKVNVREIF
                     EQFVDCPVYVDNDANIAALGEKHKGAGEGADDVVAITLGTGLGGGIISNGEIVHGHNG
                     SGAEIGHFRADFDQRFKCNCGRSGCIETVASATGVVNLVNFYYPKLTFRSSILELIKE
                     NKVTAKAVFDAAKAGDQFCIFITEKVANYIGYLCSIISVTSNPKYIVLGGGMSTAGPI
                     LIENIKTEYHNLTFAPAQFETEIVQAKLGNDAGITGAAGLIKTYVLDKEGVK"
     gene            14367..14696
                     /locus_tag="O7798_001377"
     CDS             14367..14696
                     /locus_tag="O7798_001377"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500157.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MTH1187 family thiamine-binding protein"
                     /protein_id="HDC2863643.1"
                     /translation="MAIVDVVVIPVGTEGPSVSKYIADIQKKLQEYKAMGKIDFQLTP
                     MNTLIEGELSDVLEVVQVIHELPFDKGLSRVCTNIRIDDRRDKSRKMNDKLTSVQKHL
                     ENSGENL"
     gene            14693..15316
                     /locus_tag="O7798_001378"
     CDS             14693..15316
                     /locus_tag="O7798_001378"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500156.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HDC2863644.1"
                     /translation="MRISSLTLGLVDTNTYFIENDKAVILIDPSGESEKIIKKLNQIN
                     KPLKAILLTHAHFDHIGAVDDIVDRFDVPVYMHEAEFDFLKDPVKNGADKFKQYGLPI
                     ITSKVTPEKLNEGSTEIEGFKFNVLHTPGHSPGSLTYVFDEFAVVGDTLFNNGIGRTD
                     LYKGDYETLVDSIQDKIFELEGDLPLFPGHGPYTTVDDEQLNPFLHG"
     gene            15368..16342
                     /locus_tag="O7798_001379"
     CDS             15368..16342
                     /locus_tag="O7798_001379"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500155.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II/IV secretion system protein"
                     /protein_id="HDC2863645.1"
                     /translation="MKILFQEIINKAIEMKASDVHFIPVKNEVSIKFRINDNLEQYEQ
                     IGNSIYQKLLVYMKFQAGLDVSTQQVAQSGRYSYLFNKIYFLRISTLPLSLGQESCVI
                     RIVPQFFQPQKSTYKFNDFKHLMNKKQGLLLFSGPTGSGKSTLMYQMVSYANKALNLN
                     VISIEDPVEMQIPGIVQINVNDKAGINYVNSFKAILRCDPDVILIGEIRDKDVAKCVI
                     QASLSGHLVLTTLHATDCKGAILRLLEMGISVQELIQATNLIINQRLVTTIKQQRQLV
                     CEILSQQQLRYFFSHNHSLPSSFKNLEDKLDDMTKAGVICETTMHKYI"
     gene            16314..>16974
                     /locus_tag="O7798_001380"
     CDS             16314..>16974
                     /locus_tag="O7798_001380"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000776424.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II secretion system F family protein"
                     /protein_id="HDC2863646.1"
                     /translation="MKLQCINTFKLHSKKRQLSKAQQIDLLSNLCNLLKYGFTLYQSF
                     QFLNLQMTYKNKQLGTTILSEISNGAPCNQILSLIGYSDTIVMQVYLAERFGNIIDVL
                     EETVNYMKVNRKSEQRLLKTLQYPLILVSIFIAMIIILNLTVIPQFQQLYTSMNIQLS
                     SFQKTLSFFITSLPTIIVVMLIIVSMLAIIMKLIYNNLNMLNKINFVMKLPLISGYFQ
                     LF"
BASE COUNT         6304 a         2229 c         3097 g         5344 t
ORIGIN      
        1 agcaatattg aataaatttc gaatgttcat atttaaaatc gggaggccgt ttcatgtctg
       61 ataacacagt taaaattaaa aaacaaacaa ttgatccgac attaacatta gaagatgtta
      121 agaagcaatt aattgaaaaa ggtaaaaaag agggtcattt aagtcatgaa gaaattgctg
      181 aaaaacttca gaattttgat atcgactctg atcaaatgga tgatttcttt gatcaattaa
      241 atgataatga tatttcacta gttaatgaaa aagatagttc agatactgac gagaaactga
      301 atccaagtga tcttagtgcc cctccaggtg ttaaaataaa tgacccagtt cgtatgtacc
      361 ttaaagaaat tgggcgtgtt aacttattaa gtgcacaaga agaaatcgaa ttagccaaac
      421 gtattgaaca aggtgatgaa gtagcaaaat caagacttgc agaagcgaac ttacgtttag
      481 ttgtaagtat tgctaaaaga tacgtaggtc gtggtatgtt attccttgat ttaatccaag
      541 aaggtaatat gggtcttatt aaagctgttg aaaaatttga ctttaacaaa ggatttaagt
      601 tttcaacata tgcaacatgg tggattagac aagcaatcac tcgtgcaatt gctgaccaag
      661 cacgtacgat tcgtatccct gtgcatatgg tagaaacaat taataaatta attcgtgttc
      721 aacgtcaatt attacaggac ttaggtcgag atccagcacc agaagaaatt ggtgaagaaa
      781 tggatttacc agcagaaaaa gttcgtgaaa ttttaaaaat tgcgcaagaa cctgtttcat
      841 tagaaacacc aattggtgaa gaagatgata gtcatttagg agactttatt gaggatcagg
      901 aagcacaaag tccttcagat catgctgctt atgaattatt aaaagagcaa ttagaagatg
      961 tgcttgatac attaactgat agagaagaaa atgtattacg attaagattt ggtcttgatg
     1021 acggcagaac aagaacactt gaagaagttg gtaaagtttt cggtgttaca cgtgaacgta
     1081 ttcgacaaat tgaagcaaaa gcacttagaa aattaagaca tccaagtcgt agtaaacgtt
     1141 tgaaagactt tatggattaa tttatatcaa ttttaatgat tgataccaag acatgaataa
     1201 gcgcttattt atttttagat taagatttaa cttgagtgag gttggtacat tgaataatgt
     1261 tcaacctctt ttttcataaa ggagaataaa atgatttcgt taaataaccg attaacgacg
     1321 gtaagtcgat ttttaaaaca aggtacaatc gcggatattg gctcagatca tgcttatttg
     1381 ccaatctatg caattcaaaa ccatttatgc gaatgcggta ttgctggaga agttattcaa
     1441 ggcccttttc aagctgctgt gaaaaatgta gctgcaaacc aattagtaga tagaattgat
     1501 gtacgtttag gggatggctt aagtgttatt caacctgagg acgtaatcga taatatcaca
     1561 atttgtggta tgggcggacc acttattgct aaaattttaa aagatgggca agataagtta
     1621 agtcaacatc caaggttgat tttacaaagt aatatccaaa ctgaaaattt aagacaaaca
     1681 ttacaacaat tgaattatga aataattgat gaaataataa tggaagaaaa aggccatatt
     1741 tatgaaattg ttgtagcaga atattctaca gaattaatag agctatcatc tgatgaattg
     1801 aaattcggac caaaattgct gaacaacaaa aatgaatatt ttataaaaaa atggcaaaga
     1861 gagttagaag cactttatca tattaaatcg aaactcaata ctgaacaaca tcatcaacgt
     1921 ttagctcaaa ttaatgacga aattgctgta attgaaaggg tgttatagta atgaaaatag
     1981 ctgatttaat gacattgtta gatcatcatg tgccatttag tactgctgaa tcttgggata
     2041 atgtaggatt gttaataggt gatgaagatg ttgaagttac tggtgtttta acagcattag
     2101 actgtacgtt ggaagtagta aatgaagcaa tcgaaaaagg ttataatact attattagtc
     2161 atcatcctct aatctttaaa ggcgtaacat cattaaaagc taatggttat ggtttgatca
     2221 ttagaaaact aattcaacat gacattaatt taatagcgat gcatacaaat ttagatgtaa
     2281 atccgtatgg tgtcaatatg atgttggcga aggcgatggg tttgaagaac atttcaataa
     2341 taaataatca acaagatgta tactataaag ttcaaacata tatacctaag gataatgttg
     2401 gaccatttaa agataagctt agtgaaaatg gattagcgca agaaggtaat tatgaatatt
     2461 gtttctttga aagtgaagga agagggcaat tcaaaccagt tggtgaagct aatccaacaa
     2521 taggacaaat tgataaaatt gaatatgtag atgaagttaa aattgaattt atgatagatg
     2581 catatcaaaa gtcaagggct gagcaattaa ttaaacaata ccatccatat gaaacaccgg
     2641 tatttgattt tattgagata aaacaaacat ccctttatgg acttggcgtt atggcagaag
     2701 tggataatca aatgacattg gaagatttcg cagctgatat taaatctaaa ttaaatatcc
     2761 caagtgtccg ttttgttggt gagtctaatc agaaaattaa acgtattgca attattggtg
     2821 gttcaggtat tggatatgaa tatcaagctg tccaacaagg cgcagatgtc tttgttacag
     2881 gtgatattaa acatcatgat gccttagatg ctaaaattca tggtgtgaat ttaattgata
     2941 ttaatcatta cagcgaatat gtgatgaaag aaggtttaaa agcgttacta atgaattggt
     3001 tcaatacaga aaaaataaat ttagatgttg aagcatctac aattaataca gatccatttc
     3061 aatatattta aactaaaatc tcgggatttc taaattttga aatttcgagg ttttaatatt
     3121 tttatttaaa atagcacatt tatactttat aatagtaaag atgaacatat aaggaggcca
     3181 aatcatggca aaacatccat tcgaacaatt taatctagaa tctagtttaa ttgacgctgt
     3241 gaaagacctt aattttgaaa aaccaactga aattcagaat cgaattattc caagaatact
     3301 aaagagaaca aatttaattg gtcaatctca aacgggtaca gggaaatctc atgcattttt
     3361 attaccatta atgcagttaa ttgatagtga aataaaagaa ccacaagcaa tcgtagttgc
     3421 accaacaaga gaacttgcac aacaactata cgatgcagcg aaccatttaa gccaatttaa
     3481 agctggtgtt tcagttaaag tttttattgg tggtacagat atagagaaag atagacaacg
     3541 ttgtaatgca caaccacaat tgattatagg cacccctact agaattaatg acttagctaa
     3601 aacgggacat ttacatgtgc acttagcatc atatttagtt attgatgaag cggatcttat
     3661 gattgactta ggattaattg aagatgtaga ttacattgct gcaagattgg aagataatgc
     3721 aaatattgcg gtgtttagtg ctacaatccc acaacagtta caaccatttt taaataaata
     3781 tttaagtcat ccagaatatg tagctgtcga cagtaaaaaa caaaataaaa agaacatcga
     3841 attctattta atacctacta aaggtgcagc taaagttgaa aagactttaa atttaattga
     3901 tatactaaat ccatacttat gtattatttt ctgtaatagt agagataatg caaatgattt
     3961 agcacgttca ctaaatgaag ctggtattaa agttggtatg attcatggtg gcttaacgcc
     4021 acgtgaacgt aaacaacaaa tgaaacgtat acgtaattta gaattccaat acgttattgc
     4081 cagcgattta gcatctcgtg gtattgatat tgaaggtgtt agtcatgtca tcaattttga
     4141 tgtgccaaat gatattgact tctttacgca tagagtcgga cgaactggtc gtgggaatta
     4201 taaaggtgta gcaattacgc tttatagtcc tgatgaagaa cacaatattt cattaataga
     4261 agatcgcggt tttgtattca atactgttga tattaaagat ggtgagttaa aagaagttaa
     4321 agcgcacaat cagcgtcaag caagaatgcg caaagatgac catttaacta atcaagtgaa
     4381 gaacaaagtt cgaagtaaaa ttaaaaacaa agttaaacca ggttataaga agaaatttaa
     4441 acaagaagtt gaaaaaatga aacgtcaaga gcgtaagcaa tttagtaagc agcaaaatag
     4501 acaaaaacgt aagcaaaaca aaaaaggtta ggtgtgtttt atgttattag gatcacatgt
     4561 ttcaatgagt ggtaaaaaga tgttagaagg ttctgctata gaagcgcatg aatatggtga
     4621 aacaacattt atgatttata ctggtgcacc tcaaaacacg cgccgtaaaa gtattgaaga
     4681 tttaaatata actaaaggtc atgaagtgat ggaaaaatat ggtttatcta atattgttgt
     4741 tcatgcacca tacatcatta atattgcaaa tacaaccaaa ccagaaacgt ttaatcttgg
     4801 tgtagatttc ttgcaacaag aaattgaaag aacgcaagct ataggggcta aagatattgt
     4861 attacatcca ggtgcgcatg ttggagctgg tgttgatgcc ggaattaata agattattga
     4921 aggattaaat gaagttttaa cgaatgacaa taatgtacgt attgcgcttg aaacgatggc
     4981 aggtaaaggt acagagattg gtcgctcatt tgaagagtta gcacgtatta ttgatggagt
     5041 tcataataac gaacgtttat cagtatgttt tgatacatgt catacgcatg atgctggata
     5101 taatgttaaa gaggactttg atggcgtatt aaatgaattt gataaaatca ttggagtcga
     5161 cagaatcaaa gttgttcatg tcaatgattc taaaaatgac cgtggcgctc aaaaagaccg
     5221 acatgaaaat attggcttcg gttacattgg ttttgatgca ttaaattaca ttgtgcatca
     5281 tgatagtttt aaagatattc cgaaaatctt agaaacacct tatgttggtg aagataagaa
     5341 aaataaaaaa ccgccatata aacttgaaat tgaaatgtta aaacaacagc aatttgaccc
     5401 agaattaaaa aataaggtta tgcaacaata aaatgataat gctctcttca agaaatgcga
     5461 taaataaaac ttgaaggggg catatctctt tattttgtct aattttgagt cgtaaacatt
     5521 actgtttaca tatgttacta ggagttgtat agttgaatgt gaggtgagaa tacgatgaca
     5581 ccagtctttg aattgaaaaa tgtcaattac tactatgatc ataaaaaagt gttagaaaat
     5641 ataaacatta aaataaataa aggtgaattt ttagcaattg ttggaccaaa tggtgctggt
     5701 aaatcaacat tattgaagtt gattctaggg ttattacctt tacaaagtgg tgagattttt
     5761 gttgaaggta ttgattttaa aaataagaaa acatcaatta aattaagcta tgtatcacaa
     5821 aaagcaaatg cctttaattc aggtttccca gcaagtgtta aagaagttgt tttaagcgga
     5881 ttaacaaaga caaaacgtct tttccaaaca tttaatagca aagataatga aaaagtgatt
     5941 aaagtactag aaagactgaa tataagtgat ttaattcata aaaatatagc agaattatca
     6001 ggtggtcaac aacaacgtgt aatgattgct cgagcattga tttcagaacc tgcagtatta
     6061 gtacttgatg aaccaacgaa tggtattgat gcaaaacatg taagtgaatt ttataatact
     6121 ttagatcaat taaaacaaga aggtatcacc attatcttag ttactcatga tatcggtgtt
     6181 gtagcagata ctgctactga agtagcatgt ttaaataagc atttgcattt ccatggtaca
     6241 actgatgagt ttaaatcact tgatgaagtt gaaatttcaa aaatttatgg acatcctgta
     6301 cgttttgtcg atcatcagca taatcgagaa tgttgtaatt aataaagatt tgagtttatt
     6361 taaaatggaa aggcgtgtca caattgatag atgcattatt gaattttgat tttatgaggt
     6421 actctttaat tagtggtatc ttgataggtt ttattgcgcc tctaatcggt gcttttatcg
     6481 ttgttagacg actatcactt atagctgatg ctctaagtca tgtaacttta ggtggtatat
     6541 ctttcggtat gtttttactt actattatgc caacactagt atttattaat ccaatgtggt
     6601 ttggaatctt attcgcaata gtaggtgcgc ttctaattga aaaattaaga acgtcataca
     6661 ctgcttacca agaaattgct attccaatta taatgagtgc tggtatcgcc ttgagtgcaa
     6721 tcttcatttc attagctgat gggttcaatc aagaaattgt tggattgcta tttggctcaa
     6781 taagcgcagt gaatataagt gatttaacaa cgattattgt cattgccatc atagttgttc
     6841 tgtttattac attgttttat aaagaattat ttatattgtc atttgatgag gaatatagta
     6901 aagtcattgg cattcctaaa tggattcaat ttttatttat tgttattgta gcgatggtta
     6961 tttctgcctc aatgcgtgtt gtagggatac tgttagtaag tgcgttaatc acgttaccaa
     7021 ttgcaataag tatgcgaata acaaaaagtt ttaagcaatt gatattacta agtgtatttt
     7081 taggtgaatt atcagtaata ttaggcttag tcctagcttt ctatatggac atttctccgg
     7141 gtggtgtaat tgtagttcta cttgttattt tacttatgat tacaatggct tatcagaaaa
     7201 tgcgaatgaa gtttaaaaag ggagctaata tcaatgaata caaatgatgc tattaaaatt
     7261 ttaaaagaga acggtttaaa atatacagat aaacgtaaag atatgttaga tatttttgtc
     7321 gaagaagata agtatataaa cgcaaagtat atacaacaag ttatggatga aaattatcct
     7381 ggaatttcat tcgacacaat atatagaaac ctgcacttat ttaaagattt aggaattatt
     7441 gaaaatacag aacttgatgg tgaaatgaag tttagaatcg cttgtacaaa ccatcatcat
     7501 catcatttta tctgtgaaaa gtgtggagat acaaaggtaa tagattattg tccaatagat
     7561 cagataaaat tatcactacc tggtgttaat attcacaaac acaaacttga agtttatggt
     7621 gtatgtgagt cttgccaaga ttaatataaa gaaatgagat ttatgcacat ttggtcagat
     7681 gtatgcataa atctcatttt ttaaattata gaagataaag gttcatttca tactccgttc
     7741 gtatgatttt atggcaaatc tgttaacttt ttatatacaa aatgtttaat tatttttgat
     7801 ttgagttata ttaaatgagt agagaaaata ataagtagta gaatttaagc aaattctttg
     7861 ttgaaccagt cactgcttgt tattatttac ttacagacat tttaggagga tgattattta
     7921 tggcttttga attaccaaaa ttaccatacg catttgatgc attagaacca cattttgaca
     7981 aagaaactat ggaaattcac catgacagac atcataacac gtatgttacg aaattaaatg
     8041 ctgcagtaga aggtacagat ttagaatcta aatctattga agaaattgtt gctaatttag
     8101 acagtgtacc agctaacatc caaactgctg tacgtaataa tggcggtgga catttaaacc
     8161 attcattatt ctgggagtta ctttcaccaa actcagaaga aaaaggtact gtagtagaaa
     8221 aaattaaaga acaatggggt tctttagaag aatttaaaaa agaatttgct gacaaagcag
     8281 ctgcacgctt tggttcaggt tgggcttggt tagtcgtaaa caatggccag ttagaaattg
     8341 tgactacacc aaaccaagat aatccattaa ctgagggtaa aacacctatt ttaggtttag
     8401 acgtatggga acacgcttat tacctaaaat atcaaaacaa acgccctgac tacattggcg
     8461 cattttggaa tgtagttaac tgggaaaaag ttgacgaatt atataatgca acaaaataaa
     8521 gtatgattac ttgttcggtc tcttaaatga gaccgttatt tttttgtcaa aaagatagaa
     8581 ataatttcta aattcatata tgatttaaag tgaaagactt tgaatagagg taggtagttt
     8641 tgttaaaaag actaaaagaa aaatcaaatg atgaaatcgt tcaaaataca attaacaaga
     8701 gaattaactt tatatttggt gtgattgtat ttatttttgc agtactagta ctacgtttag
     8761 gttatttaca aatcgcacaa ggctcacatt ataaacaaat tataaaaaat gatgaaaaca
     8821 ttacagtgaa tgagtctgtg ccaagaggtc gtattttaga cagaaatggg aaagttttag
     8881 ttgataatgc ttctaaaatg gctattacat atactagggg tcgaaaaaca acacaatcgg
     8941 aaatgttgga tacggctgaa aagttatcaa agctaatcaa gatggatact aagaaaatta
     9001 cagaacgtga taagaaagat ttctggattc agttgcatcc taaaaaagca aaagcaatga
     9061 tgacaaaaga acaagctatg ttagcagatg gaagtattaa acaagatcaa tatgataaac
     9121 aactgttatc gaaaatcgga aaatcacaat tagatgaatt gtcttctaaa gatttacaag
     9181 ttttagctat ttttcgagag atgaatgcag gaacagtttt agatccacaa atgataaaaa
     9241 atgaagatgt cagtgaaaaa gagtatgcag cagtttctca gcaactttcc aaattaccag
     9301 gtgttaacac gtctatggat tgggatagaa aatatctata tggcgatact ttaagaggta
     9361 tattcggaga tgtatcgaca cctgctgaag gtattccaaa agaattgaca gaacattact
     9421 tatccaaagg atattcacgc aatgatcgtg ttggaaaatc ttacctagaa tatcaatatg
     9481 aagatgtatt gcgtggtaag aagaaagaaa tgaaatacac aacggacaaa tctggtaaag
     9541 ttacatcttc agaagtgtta aatcctggcg ctcgcggtca agatttgaaa ttaacgatcg
     9601 atatagatct tcaaaaagaa gtagaagcat tattagataa acaaattaag aagcttcgca
     9661 gtcaaggtgc caaagatatg gataatgcaa tgatggttgt acaaaatcct aaaaatggag
     9721 acattcttgc gcttgccgga aagcagatta ataagagtgg taaaatgact gattatgaca
     9781 ttggtacgtt tacttctcaa tttgcggttg gatcttctgt aaaaggtgga acattattag
     9841 ccggttatca gaataaagct atcaaagttg gagaaacaat ggtcgatgaa ccattacatt
     9901 tccaaggtgg tttgacaaaa cgatcatact tcaataaaaa cgggcatgta actattaatg
     9961 ataagcaagc tttgatgcat tcatcaaacg tatatatgtt taaaacagca ttaaaattag
    10021 cgggagaccc ttattattct ggtatggctt taccttcaga cataagttca cctgcccaaa
    10081 agctaagaag aggattaaat caagtaggct taggtgtgaa aacagggata gatttaccaa
    10141 atgaaacaag aggtcaaatc gaaccattaa caaataatcc aggtaattat ctagatttat
    10201 caattggtca atatgatacc tatacaccat tacaattatc acaatatgtt tcaactatag
    10261 cgaatgatgg ttatagaata cagccacaca ttggattaac gattcatgaa tcaactaata
    10321 aagatgaggt tggtccactc aagaagaaaa ttaatggcac tgtcttgaac aaggttaata
    10381 atactgaaaa ggaaatcaaa caaattcaag aaggattcaa aatggcattt aatgataaag
    10441 atggtactgg atatgttagt tttaaagata cagtagtacc tactgctggt aaaacgggta
    10501 ccgcagaagt gttccaaaac ggagagccaa gagttaactc tacttatata ggatacgcgc
    10561 caattgatga tccaaaatta gcgttttcaa ttgtatatac aaatcagcct gtaccaccac
    10621 catggttaac aggtggagac ttaggtagag atgtaattaa ctactacttt aagcagttag
    10681 gtaaagatga taaaaataaa gacaaagaca aataaaattt aacctgacga ttgtgtagcg
    10741 catggttgta aaattttaac tttgcaaata ttatagatgt tggtataata ataaagtcgt
    10801 atttagaaat gataaggagg aataaccatg cgcgtaaacg taactttagc ttgtacggaa
    10861 tgtggtgaca gaaactacat tacaactaag aacaaaagaa ataatccaga acgtgttgaa
    10921 atgaagaaat tctgttcacg tgaaaacaaa caaactttac accgtgaaac aaaataatca
    10981 ttaaaattaa atttaaatta acaataaaaa aggtgaaatc tcaaaataag aggtttcacc
    11041 tttttaatta tgcacacgta tgaaatgata aaagattttc aattgaaata ataaatttta
    11101 gaattgtcgc ataattcatc atgacaacat aatgacatgt attgttatta acgatataat
    11161 agaattgaat aaagtgggtg ataatgtgac taaaaatgag attagaaaat acattttaca
    11221 taaaatgaag aattttaata aagctgaaaa gcgaaaagca gacacatggt taagaaatca
    11281 attttttgca actgaagaat acaaagaagc aaacgcaatt gcgctagttc tttcttttaa
    11341 tcatgaagta gatacttttt ctattattga acaagcctta atggatcata aacgtatttt
    11401 tgtaccgaaa atggattatt taaatcatca aatgactttt aaagagatat ttaatctcaa
    11461 agatattgat gtcgataata aggggattta ctatccaact tcaaaaggtg aaacaacgaa
    11521 taacctagat ttaattgttg ttcctggtgt tggatttcaa gacgatggat atagaattgg
    11581 gtatggtggt ggctattacg acaggttttt agctaattat cagacaaaga caataagctt
    11641 attatacgat tttcaaataa catcatttga accggaatca ttcgatcaac cagtcgataa
    11701 attgattata tatcaagcag catagtggag gactaaatga acatagacaa acaattttgg
    11761 aaaacaatat attattggat taggtacttg aattttgata ttgtcagtag ggaaaaagat
    11821 gaccaagaaa tttggttagc ccataaaaga aaaaaacaag tagtcatttt taaacaacat
    11881 atcaagtcta cccaagaaat acgttttgac aaagcgaaag tgcttgaaca caaagatgaa
    11941 atagcaaatt ttatttcttt cgaaccacaa agttttgaat tttattattt tacagaatcg
    12001 gaattttcag aagaacaatt aaatgaagtt tcgccaatta gaattaaatt caatgttata
    12061 agacacacaa aagatttgat aaagcatatg ccgaatatat ttttggctag acttatttca
    12121 gaagataatg ataaaaagac atatatgttc tataaacgca aagtattaac cgataacttt
    12181 ttagataaat atatgcagaa attttcaccg gcaacataca caataatatt tgtaaatgtc
    12241 ttaatatggt tatgtatgat tttatattta aataattttt cggatgtaaa attattagat
    12301 gttggcgggt tagtgcattt taatgtcgta catggtgaat ggtatcgaat tgttacatcg
    12361 atgtttttac attttagttt tgaacatata cttatgaata tgctttcatt atttattttt
    12421 ggtaaaatag tcgaagcaat tattggttca tggcggatgt taactgtata ctttattgca
    12481 gggttgtttg gaaactttgt atcactatca tttaatacga ctacaatttc agttggggct
    12541 agtggtgcta tatttggtct gattggatca atttttgcga tgatgtatgt ttcaaaaaca
    12601 tttaacaaaa aaatgttagg acagttatta attgcattag tgatattagt tggtgtttct
    12661 ctgtttatgt caaatataaa tattgtggcg catattggag gattcattgg tggtttatta
    12721 ataactttaa ttggctatta ctataaagtg aatcgtaata ttttttggat tttactaatt
    12781 ggtatgcttg ttatatttat tgcacttcaa attagaattt ttacaattaa agaagataat
    12841 atttataata aattgatcaa agatgatatg actagtggta attatgataa tgctcaaaat
    12901 attgtgaagc agacaataaa taaaaattat gccgatgatc aaacatatta tttaagtggt
    12961 atgattatgg ctactatcaa ttctaagtcc gaaggtatga cagaatggga gcgaggactt
    13021 agaatgtttc ctaaatcagg tttattaaat tttgagttag cgatagcaaa tcgttcatta
    13081 aatgatgatg aaaaagcatt aaaatatgtg cgtaaagcat taaatgcaga ccctaaaaat
    13141 acagattata ttaacttaga aaaagagttg actaaatcaa atgagtcgaa aaataaataa
    13201 cttttatgat gtacaacagt tattgaaaag ttacggattt ctaatatatt ttaaaaatcc
    13261 agaagatatg tacgaaatga ttcaacagga gatttcatca ttgtatcaat atgaactgtt
    13321 atctaaggaa gaatatttga aatgtacgtt gataattaat cagagaagga atgaacagaa
    13381 atgacaaaaa ttattttagc agctgatgta ggcgggacga cttgtaaatt aggtattttc
    13441 acacctgaat tagaacaatt acataaatgg tctattcaca ctgatacatc tgatagtaca
    13501 ggatatacac ttttgaaagg aatttatgat tcgtttgttg aaaaagtaaa tgaaaataat
    13561 tataattttt caaatgtact tggcgtaggt attggtgtac caggtcctgt tgactttgaa
    13621 aaaggtacag taaatggagc agtaaactta tattggccag aaaaagttaa tgtacgtgag
    13681 atttttgaac aattcgttga ttgtccagtg tatgtagata atgatgctaa catagctgct
    13741 ttaggggaga aacacaaagg tgctggtgaa ggtgccgatg atgttgttgc catcacactt
    13801 ggtacaggtc taggtggagg aattatttca aatggtgaaa tcgtacatgg tcataatggc
    13861 tctggcgcag aaataggtca ttttagagca gacttcgatc aacgatttaa atgtaattgt
    13921 ggtcgttctg gatgtattga aacagttgct tcagcgacag gcgttgttaa cttagttaac
    13981 ttctactatc cgaagttgac gtttagatct tctatattag aattgattaa agaaaataag
    14041 gttacagcaa aagctgtttt tgatgcggca aaagctggtg accaattctg tattttcatt
    14101 actgaaaagg ttgcaaacta tattggatat ttatgtagta ttattagtgt tacaagtaat
    14161 ccgaaatata tcgttctagg tggaggaatg tctactgcag gacctatttt aattgaaaat
    14221 attaaaacag aatatcataa tttaacattt gcacctgctc aatttgaaac tgaaattgta
    14281 caagcgaaat taggtaatga tgcaggtatt acaggagcag caggattaat caagacctat
    14341 gtattagata aagagggggt aaaataatgg ctattgttga tgtggttgtt attccagttg
    14401 gaacggaagg tccgagtgtt agtaaatata ttgcagatat tcagaaaaaa cttcaagaat
    14461 ataaagcaat gggtaaaatt gattttcaat taacaccaat gaatactcta attgaaggtg
    14521 aattaagcga tgtattagaa gttgtgcaag tgatacatga attacctttt gataaaggtt
    14581 taagtagagt ttgtacaaat atccgtattg atgaccgacg agacaaatct agaaaaatga
    14641 atgataaact aacatcagta caaaaacatt tagaaaatag tggtgaaaac ctatgaggat
    14701 ttcaagctta actttaggct tagttgatac taatacgtat ttcatcgaaa atgacaaagc
    14761 tgttattctg attgaccctt caggtgaaag tgaaaaaatt attaaaaaat taaaccaaat
    14821 aaataaaccg ttaaaagcta ttttattaac acatgcacac tttgatcata tcggagcagt
    14881 cgatgatata gttgatcgat tcgatgtccc ggtttatatg catgaagcag agtttgattt
    14941 tctaaaagat cccgttaaaa atggggcaga taaatttaag caatatggat taccaattat
    15001 tacaagtaag gtaactcctg aaaagttaaa cgaaggtagc acagaaatag aaggatttaa
    15061 gtttaatgtg ttacacacac ctggacattc accaggaagt ttaacatatg tgttcgatga
    15121 attcgcagtt gttggagata cattatttaa taatggaatc ggacgtacag atttatataa
    15181 aggtgattat gaaacgctag ttgattctat tcaagataaa atatttgaat tagaaggcga
    15241 tttaccttta ttccctggac atggtccata tacgacggtt gatgatgaac aattaaatcc
    15301 atttttacac ggttaaattg aagtaataaa aacacctcct acgtgattat atgtaggagg
    15361 tgtttttttg aagattctat ttcaagaaat aattaataaa gcgatagaaa tgaaagcgag
    15421 tgatgtacat tttattccag ttaaaaatga agtaagtatt aaatttagaa ttaatgataa
    15481 cttggagcag tatgaacaaa ttgggaatag catttatcaa aagttattag tttatatgaa
    15541 gtttcaagct gggcttgatg tttctacaca gcaagtcgca cagagcggtc gatatagtta
    15601 ccttttcaat aaaatatatt ttttgagaat atcaacttta ccattgtcac ttggccaaga
    15661 aagttgtgtt atcagaattg tacctcaatt ttttcaacca cagaaatcaa cttataaatt
    15721 caatgatttt aaacacctca tgaataagaa acaaggatta ctattgttta gtggaccaac
    15781 tggttcagga aagagtacat taatgtatca aatggtctca tacgcgaata aagccttgaa
    15841 tttaaatgta atttctatag aggatcctgt agagatgcaa attcctggta tcgtccaaat
    15901 taatgtgaat gataaagctg gcataaacta tgtaaattcg tttaaagcta ttttaagatg
    15961 tgatcctgat gttattttaa taggtgaaat cagagataaa gatgttgcca agtgtgttat
    16021 acaggctagt ttaagtggtc accttgttct gactacattg catgcaactg attgtaaagg
    16081 tgctatttta aggctattag aaatgggcat ttctgtacaa gaattgatac aggcaactaa
    16141 cttaattata aaccaacgac ttgtaactac tattaagcaa cagcgacaat tagtatgtga
    16201 aattctatct cagcaacaac tccgatattt cttttcccat aatcattcat taccatcatc
    16261 atttaagaac ttagaagata aacttgatga tatgacaaaa gcaggtgtca tttgtgaaac
    16321 tacaatgcat aaatacattt aaactacatt ctaagaagcg acaattaagt aaggcccaac
    16381 aaatcgactt actttcaaat ttatgtaatt tgttgaaata tggtttcact ctgtatcaaa
    16441 gttttcaatt tttaaatctt caaatgacat ataaaaataa gcaattaggt accaccattc
    16501 taagtgaaat ttcaaatggt gcaccatgca atcaaatatt atcactgata ggttatagcg
    16561 atactatcgt catgcaagta tatttggcag aaagatttgg caatattata gacgttctag
    16621 aagaaaccgt aaattatatg aaagtgaata gaaagtcaga acaacgattg ttaaagacac
    16681 tgcaataccc cttaatacta gtttctatct ttattgctat gattattata ttaaacctca
    16741 cagtaattcc acagtttcaa caattatata cttctatgaa tattcaacta tcttcttttc
    16801 aaaaaacatt gtcttttttc attaccagct tacctactat aattgtagta atgctcataa
    16861 tagtatctat gttggctatt attatgaaat taatttataa caatttaaat atgctcaata
    16921 agataaactt tgtgatgaaa ctaccgctaa tatcaggcta tttccaatta ttta
//
LOCUS       DALPQQ010000051        16637 bp    DNA     linear   BCT 22-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus strain K18-6-464
            SAMD00233528-rid16434743.denovo.051, whole genome shotgun sequence.
ACCESSION   DALPQQ010000051 DALPQQ010000000
VERSION     DALPQQ010000051.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMD00233528
            Sequence Read Archive: DRR236061
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 16637)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 16637)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001543423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001543423.1
            Genome Coverage       :: 77x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/22/2022 17:09:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,811
            CDSs (total)                      :: 2,743
            Genes (coding)                    :: 2,689
            CDSs (with protein)               :: 2,689
            Genes (RNA)                       :: 68
            rRNAs                             :: 2, 4, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 4, 2 (16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 54
            CDSs (without protein)            :: 54
            Pseudo Genes (ambiguous residues) :: 0 of 54
            Pseudo Genes (frameshifted)       :: 27 of 54
            Pseudo Genes (incomplete)         :: 27 of 54
            Pseudo Genes (internal stop)      :: 10 of 54
            Pseudo Genes (multiple problems)  :: 10 of 54
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..16637
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMD00233528-rid16434743.denovo.051"
                     /strain="K18-6-464"
                     /db_xref="taxon:1280"
                     /geo_loc_name="Japan: Niigata"
     gene            252..626
                     /locus_tag="O7798_001381"
     CDS             252..626
                     /locus_tag="O7798_001381"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499183.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SarA family transcriptional regulator"
                     /protein_id="HDC2863647.1"
                     /translation="MAITKINDCFELLSMVTYADKLKSLIKKEFSISFEEFAVLTYIS
                     ENKEKEYYLKDIINHLNYKQPQVVKAVKILSQEDYFDKKRNEHDERTVLILVNAQQRK
                     KIESLLSRVNKRITEANNEIEL"
     gene            complement(877..1665)
                     /locus_tag="O7798_001382"
     CDS             complement(877..1665)
                     /locus_tag="O7798_001382"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499182.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HDC2863648.1"
                     /translation="MNKVTINPQIQLTYQIEGKGDPIILLHGLDGNLAGFEDLQHQLA
                     SSYKVLTYDLRGHGKSSKSESYDLNDHVEDLKILMEKLNIHEAHILGHDLGGVVAKLF
                     TDKYAYRVKSLTTIASKKDDLIHSFTQLLIQYQDDIAGFNKSEAYILLFSKLFRNQEK
                     TMKWYQKQRIYSIKSEDDSAVAIRSLILHKDEPMYLKKRTCVPTLLINGEHDPLIKDK
                     NHFKLEAHFLNVTKKIFEHSGHAPHIEEPEAFMNYYLKFLKSVS"
     gene            complement(1834..2550)
                     /locus_tag="O7798_001383"
     CDS             complement(1834..2550)
                     /locus_tag="O7798_001383"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499181.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDC2863649.1"
                     /translation="MRINDKILLENIEDYFNHKGLSPHLIDDIKEKVITDIKKSEKKD
                     QDYIEYKRKSPAQIILMIQRNLFALQMNPVIFFIINFILISYLYDKQYVQFQAITGMS
                     LFYCLVIFPMTIVVYLRVSQKNYLRSNKIEMIMGTIIAIISLLLIILQAFNITWGVIP
                     ITNFGHQFFFFIGIILVIAGIFYKRLEFSGIGLLFCQKTVDAMIHNPQSAQIFSLIIW
                     ILLVVLVIYFTIRLSSRTRL"
     gene            complement(2712..3218)
                     /locus_tag="O7798_001384"
     CDS             complement(2712..3218)
                     /locus_tag="O7798_001384"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499180.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDC2863650.1"
                     /translation="MKKLLTASIIACSVVMGVGLVNTSAEAASGNSIDTVKQLIKGDQ
                     SLENVKIGESIKDVLTKYKNPMYSYNEDGTEHYYEFHTKKGMLLVTTDGKKNNGKVTH
                     ISMMYNDANGPTYQAVKNYVGKAVTHTEYSKVAGNFGYIEKGKTTYQFASAPKDKNIK
                     LYRIDLEK"
     gene            complement(3354..4154)
                     /locus_tag="O7798_001385"
     CDS             complement(3354..4154)
                     /locus_tag="O7798_001385"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499179.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HDC2863651.1"
                     /translation="MDLFTRKDGTSIHYSTLGEGYPIVLIHTVLDNYSVFNKLAAELA
                     KSFQVVLIDLRGHGYSDKPRHIEIKDFSDDIVELLKYLYIEEVAFVCHEMGGIIGADI
                     SVRYPEFTSSLTLVNPTSIEGELPEERLFRKYAHIIRNWDPEKQDKFLNKRKYYRPRK
                     MNRFLKHVVDTNEISTKEEIQAVKEVFKNADISQTYRNVVVPTKIIAGEFGERTTRLE
                     AKEVADLIQNADFEVYQESSAFPFVEEQERFVEDTAAFINKHHDEKHV"
     gene            complement(4138..4857)
                     /locus_tag="O7798_001386"
     CDS             complement(4138..4857)
                     /locus_tag="O7798_001386"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499178.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAD family hydrolase"
                     /protein_id="HDC2863652.1"
                     /translation="MDLNQIKAVVFDLEGTLLDRVKSREKFIEEQYERFHDYLIHVQL
                     ADFKKAFIELDDDEDNDKPDLYKEIIKRFHVDRLTWKDLFNDFEMHFYRYVFPYYDTL
                     YTLEKLSQKGFQIGVIANGKSKIKQFRLHSLGLMHVINYLSTSETVGFRKPHPKIFED
                     MIDQLGVLPEQIMYVGDDALNDVAPARAMGMVSVWYKQEDAEIEPLEEEVDFTITTVE
                     ELLTILPIKNDNKGENYGSIY"
     gene            complement(4912..5862)
                     /locus_tag="O7798_001387"
     CDS             complement(4912..5862)
                     /locus_tag="O7798_001387"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499177.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron ABC transporter permease"
                     /protein_id="HDC2863653.1"
                     /translation="MTFNKVLLSWIVILIITTSIYLFWQLGDINDVFNQSILINVRLP
                     RLLEALLTGMILTVAGLIFQTVLNNALADSFTLGLASGATFGSGLALFLGLTTLWIPV
                     FSITFSLITLITVLVITSVLSQGYPVRILILSGLMIGALFNSLLYFLILLKPRKLNTI
                     ANYLFGGFGDAEYSNVSIIAITFIIALFGIFIILNQLKLLQLGELKSQSLGLNVQLIT
                     YIALCIASMITAINVAYVGIIGFIGMVIPQLIRKWQWKQSLGRQLALNIVTGGQIMVM
                     ADFIGSHILSPVQIPASIIIALIGIPVLFYMLISQSKRLH"
     gene            complement(6010..6897)
                     /locus_tag="O7798_001388"
     CDS             complement(6010..6897)
                     /locus_tag="O7798_001388"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015581799.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HDC2863654.1"
                     /translation="MKKSLIAFILIFMLVLSGCGMKDNDKQGSNDNGSSKSPYHRIVS
                     LMPSNTEILYELGLGKYIVGVSTVDDYPKDVKKGKKQFDALNLNKEELLKAKPDLILA
                     HESQKATANKVLSSLEKQGIKVVYVKDAQSIDETYNTFKQIGKLTHHDKQAEQLVEET
                     KDNIDKVIDSIPAHHKKSKVFIEVSSKPEIYTAGKHTFFNDMLEKLEAQNVYSDINGW
                     NPVTKESIIKKNPDILISTEAKTRSDYMDIIKKRGGFNKINAVKNTRIEVVNGDEVSR
                     PGPRIDEGLKELRDAIYRK"
     gene            complement(7276..7911)
                     /locus_tag="O7798_001389"
     CDS             complement(7276..7911)
                     /locus_tag="O7798_001389"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499175.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="endonuclease III domain-containing protein"
                     /protein_id="HDC2863655.1"
                     /translation="MLGTDELYKVLYEHLGPQFWWPADNDIEMMLGAILVQNTRWRNA
                     EIALNQIKEHTHFNPNHILELPIETLQSLIHSSGFYKSKSLTIKTLLTWLARHHFNYQ
                     EINERYKGGLRKELLSLKGIGSETADVLLVYIFGRIEFIPDSYTRKIYDKLGYENTKN
                     YDQLKKVVTLPNHFTNQDANEFHALLDVFGKHYFRDKDIKNYDFLEPYFKK"
     gene            complement(8300..9961)
                     /locus_tag="O7798_001390"
     CDS             complement(8300..9961)
                     /locus_tag="O7798_001390"
                     /EC_number="6.1.1.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499174.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arginine--tRNA ligase"
                     /protein_id="HDC2863656.1"
                     /translation="MNIIDQVKQTLVEEIAASINKAGLADEIPDIKIEVPKDTKNGDY
                     ATNIAMVLTKIAKRNPREIAQAIVDNLDTEKAHVKQIDIAGPGFINFYLDNQYLTAII
                     PEAIEKGDQFGHVNESKGQNVLLEYVSANPTGDLHIGHARNAAVGDALANILTAAGYN
                     VTREYYINDAGNQITNLARSIETRFFEALGDNSYSMPEDGYNGKDIIEIGKDLAEKHP
                     EIKDYSEEARLKEFRKLGVEYEMAKLKNDLAEFNTHFDNWFSETSLYEKGEILEVLAK
                     MKELGYTYEADGATWLRTTDFKDDKDRVLIKNDGTYTYFLPDIAYHFDKVKRGNDILI
                     DLFGADHHGYINRLKASLETFGVDSNRLEIQIMQMVRLMENGKEVKMSKRTGNAITLR
                     EIMDEVGVDAARYFLTMRSPDSHFDFDMELAKEQSQDNPVYYAQYAHARICSILKQAK
                     EQGIEVTAANDFTTITNEKAIELLKKVADFEPTIESAAEHRSAHRITNYIQDLASHFH
                     KFYNAEKVLTDDIEKTKAHVAMIEAVRITLKNALAMVGVSAPESM"
     gene            complement(9958..10374)
                     /locus_tag="O7798_001391"
     CDS             complement(9958..10374)
                     /locus_tag="O7798_001391"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000359087.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1934 domain-containing protein"
                     /protein_id="HDC2863657.1"
                     /translation="MDKKVSIQTKQVLKQHNEKEKFEFTTEGTWQQRQSNFIRYVEQI
                     EDATVNVTIKVDDDSVKLIRKGDINMNLHFVEGQTTTTFYDISAGRIPLEVKTLRILH
                     FVSGDGGKLKIHYELYQDNEKMGSYQYEINYKEIGE"
     gene            complement(10467..10574)
                     /locus_tag="O7798_001392"
     CDS             complement(10467..10574)
                     /locus_tag="O7798_001392"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499172.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDC2863658.1"
                     /translation="MKDSENLVFFGFEVLFVFYKMAYIYEALIKYGIVN"
     gene            complement(10649..11659)
                     /gene="adhP"
                     /locus_tag="O7798_001393"
     CDS             complement(10649..11659)
                     /gene="adhP"
                     /locus_tag="O7798_001393"
                     /EC_number="1.1.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499171.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alcohol dehydrogenase AdhP"
                     /protein_id="HDC2863659.1"
                     /translation="MRAAVVTKDHKVSIEDKKLRALKPGEALVQTEYCGVCHTDLHVK
                     NADFGDVTGVTLGHEGIGKVIEVAEDVESLKIGDRVSIAWMFESCGRCEYCTTGRETL
                     CRSVKNAGYTVDGAMAEQVIVTADYAVKVPEKLDPAAASSITCAGVTTYKAVKVSNVK
                     PGQWLGVFGIGGLGNLALQYAKNVMGAKIVAFDINDDKLAFAKELGADAIINSKDVDP
                     VAEVMKLTDNKGLDATVVTSVAKTPFNQAVDVVKAGARVVAVGLPVDKMNLDIPRLVL
                     DGIEVVGSLVGTRQDLREAFEFAAENKVTPKVQLRKLEEINDIFEEMENGTITGRMVI
                     KF"
     gene            complement(12158..12679)
                     /locus_tag="O7798_001394"
     CDS             complement(12158..12679)
                     /locus_tag="O7798_001394"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499170.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YwhD family protein"
                     /protein_id="HDC2863660.1"
                     /translation="MEVISLSEKKGFNFNIIKNDPLDGHKGTNIGSISLDNIAPVFID
                     VANKEAFIDIGGMHARAKVEKGVKWITDKAAVEGDEAKEYWLCWVTTERNEQGPYYAG
                     LTACYLLVNKAIRRGYKSMPEHVNMMDKSMKHHIIIDQIGDENKAILKDFLMNHDEGM
                     WKHSSDALHQAFN"
     gene            complement(12707..14002)
                     /locus_tag="O7798_001395"
     CDS             complement(12707..14002)
                     /locus_tag="O7798_001395"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499169.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HD domain-containing protein"
                     /protein_id="HDC2863661.1"
                     /translation="MTNAYVDLKLVEEKVFKDPIHRYIHVEDQLIWDLIKTKEFQRLR
                     RIRQLGTLYLSFHTAEHSRFGHSLGVYEIVRRLIDESFIGHDAWDNKDRPLALCAALL
                     HDLGHGPFSHSFEKIFNTDHEAYTQAIITGDTEVNAVLRKVAPEFPREVAEVINKTHH
                     NKLVISMISSQIDADRMDYLQRDAYFTGVSYGAFDMERILRLMRPSKDEVLIKESGMH
                     AVENFIMSRYQMYWQIYFHPVSRGGEVLLNNCLKRAKQLYNEGYEFKLHPHDFIPFFE
                     ETVTIEQYVELDEAVVTYYLEKWTKEDDAILSDLASRFINRDLFKYIPFDGSIITISE
                     LQELFEAGGINPDYYFVSEAFSDLPYDYDRPGSNRKPIHLLRQDGTIREISNQSLVIH
                     SITGINRQDYKLYYPREMVAKIKDKTIREAIENLINELN"
     gene            complement(14042..14518)
                     /locus_tag="O7798_001396"
     CDS             complement(14042..14518)
                     /locus_tag="O7798_001396"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499168.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HDC2863662.1"
                     /translation="MFKVRQATEKDVVQIRDVATKAWFNTYLNIYAATTVNHLLEASY
                     NEHHLKKRLQEQLFLVVEEGNDIVGFANFIYGEELYLSAHYVKPESQHTGYGTALLNE
                     GLSRFEDKFEGVYLEVDNKNEEAVAYYKEQGFTILRSYEPEMYGEKLDLALMYKAF"
     gene            complement(14687..15223)
                     /locus_tag="O7798_001397"
     CDS             complement(14687..15223)
                     /locus_tag="O7798_001397"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499167.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flavodoxin family protein"
                     /protein_id="HDC2863663.1"
                     /translation="MITVLFGGSRPNGNTAQLTKFALQDLEYQWIDVTQHQFKPIRDV
                     RHTAETITSYDDDYLPILDKILASDTIIFASPVYWYSISAPLKAFIEHWSETLQDKRY
                     PNFKAQMAEKDFRVILVGGDCPKIKAKPAITQMKYSLDFLGATLNGYIIGTAEKPGDI
                     MKDNYALARATEWNSILQ"
     gene            complement(15434..16372)
                     /locus_tag="O7798_001398"
     CDS             complement(15434..16372)
                     /locus_tag="O7798_001398"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499166.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aldo/keto reductase"
                     /protein_id="HDC2863664.1"
                     /translation="MKQFVNLGKSDVEVFPIALGTNAVGGHNLYPNLDEEQGKDVVRQ
                     AINHGINLLDTAYIYGPERSEELVGEVVKEYPREQIKIATKGSHEFDENQEVHQNNQP
                     EYLKQQVENSLKRLQTDYIDLYYIHFPDNNTPKDQAVAALQELKEQGKIKAIGVSNFT
                     LDQLKEANKDGYVDVVQLEYNLLHRENEAVLQYCVDHQITFIPYFPLASGILAGKYDE
                     NTKFSDHRTTRRDFKPGVFEENVRRVKALESIAAAHQTSIANIVLAFYLTRPAIDVII
                     PGAKRAEQVVENIKAADIVLSDDEIQYIDELFPIED"
BASE COUNT         5373 a         3080 c         2153 g         6031 t
ORIGIN      
        1 ctaaaccaaa tgctaaccca gaaatacaat cactgtgtct aatgaataat ttgttttata
       61 aacacttttt tgtttacttc tcatttttaa ttagttataa ttaactaaat aatagagcat
      121 taaatatatt taataaaact tatttaatgc aaaattatga ctaacatatc tataataaat
      181 aaagattaga tatcaatata ttatcgggca aatgtatcga gcaagatgca tcaaataggg
      241 aggttttaaa catggcaatt acaaaaatca atgattgctt tgagttgtta tcaatggtca
      301 cttatgctga caaattaaaa agtttaatta aaaaggaatt ttcaattagc tttgaagaat
      361 tcgctgtatt gacatacatc agcgaaaaca aagagaaaga atactatctt aaagatatta
      421 ttaatcattt aaactacaaa caaccacaag ttgttaaagc agttaaaatt ttatctcaag
      481 aagattactt cgataaaaaa cgtaatgagc atgatgaaag aactgtatta attcttgtta
      541 atgcacaaca acgtaaaaaa atcgaatcat tattgagtcg agtaaataaa cgaatcactg
      601 aagcaaacaa cgaaattgaa ctataatttt gtttagcgca atttggtgaa gtttgataga
      661 tgatacattc tattaaactt ccttttttta tgctcttttt acctaattgt taagaggttt
      721 tgcactaatg gcacttaata taaggaagat agccgcataa cgagcagtat atatcaaata
      781 catttcaaaa aaagctgatt tctatcaaat aatgaatagt aatcagcttt ttcacattgc
      841 ctaaggactt tatgccctag gtttatatat cacatattat gatacgcttt ttaaaaattt
      901 taaataataa ttcataaatg cttctggttc ttcaatatgc ggtgcatgtc ctgaatgttc
      961 gaagattttt ttcgtaacat ttaaaaaatg cgcttccaat ttaaaatgat tcttatcttt
     1021 aatcaaagga tcatgttccc cattaattaa caaagtaggt acacatgtac gtttttttaa
     1081 atacataggt tcatctttat gcaaaattaa tgaacgaatt gccaccgcac tatcatcctc
     1141 agacttaatg ctatatattc tttgtttttg ataccatttc atcgtcttct cttgatttct
     1201 aaacaattta gaaaataaaa gaatatacgc ttcagactta ttaaaacccg ctatatcatc
     1261 ttgatattgt attaacaatt gagtaaagct gtgtattaag tcatctttct tcgatgcaat
     1321 ggtagttaat gattttacac gataagcata tttatctgta aataacttag caactacccc
     1381 acctaaatca tgtcctagaa tatgtgcctc atgaatattt aacttctcca ttagaatttt
     1441 taaatcctca acgtgatcgt ttaaatcgta tgattcactt ttagaagact tgccatgacc
     1501 tcttaaatcg taagtaagta ctttatatga tgatgctagt tgatgttgca aatcttcaaa
     1561 tccagctaaa ttaccatcca atccatgaag taatattata ggatcccctt taccttcaat
     1621 ttgataagtt aattggattt gaggattaat tgtgacttta ttcattgtga cacctccctc
     1681 aataaactat atacccaacc ttcattctat atacgcttcc attttataaa caattttttt
     1741 aaattattta taaattacca aaagttattc caacaataaa aaaactattc atctcaatta
     1801 atacaattaa tcaagtgaat agttttatca tatttataat cttgtacgtg aagataatct
     1861 aattgtgaaa tatataacta gaactactaa taatatccat ataattaatg aaaaaatctg
     1921 ggctgattgt ggattatgaa tcattgcatc gacggttttt tgacaaaata ataacccgat
     1981 tcccgaaaac tcaagtcgct tataaaatat gccggcaatt actaaaataa taccaatgaa
     2041 aaagaaaaat tgatgtccaa aatttgtaat tggtataacg ccccaagtaa tattaaatgc
     2101 ttgtaatata attaataaca aggatatgat agcgataatt gtacccataa tcatttctat
     2161 tttattacta cgcaagtaat tcttttgaga cacccttagg tatacaacaa tagtcattgg
     2221 aaaaatcact aaacaataaa atagactcat tccagtaata gcttgaaact gaacatactg
     2281 tttatcatat aaataggata tgagaatgaa gtttataata aagaaaataa ctggattcat
     2341 ttgtaaagca aacaaattcc tttgaatcat taatatgatt tgtgctggag attttctttt
     2401 atattcaata taatcttgat ctttcttttc agattttttt atatcagtaa ttactttctc
     2461 tttaatatca tcaatcaaat gcggtgataa acctttatga ttaaagtaat cttctatatt
     2521 ttctagtaaa attttatcgt taatacgcat tggtagtact cctttaaaat gaaacatctt
     2581 tatttattgt attggtttaa tttccccttc gcaaatcata aaaattaata ttcactgtat
     2641 tatgccatgt aataaaataa ccgacaagta ttgcgattta acttgtcggt taagcacgat
     2701 taatttaatt attatttttc caaatcaata cgatataatt ttatgttttt atcttttggt
     2761 gctgaggcaa attgataagt cgttttgcct ttttcaatat atccaaaatt accagcaact
     2821 ttgctatatt ccgtatgtgt tactgctttg ccaacataat ttttaacagc ttgatatgtt
     2881 ggaccattag catcattata catcattgaa atatgagtta ctttaccatt gtttttctta
     2941 ccatcagtag ttactaataa catacctttt ttagtatgga attcgtaata atgttcagtt
     3001 ccatcttcat tgtaagaata catcggattt ttgtacttag ttaaaacatc tttaatagat
     3061 tcgccaattt tcacattttc taatgactga tcacccttaa ttaattgttt aacagtatca
     3121 atagagttgc cacttgctgc ttcggcacta gtgttcacta agcctactcc cattacaaca
     3181 gaacatgcaa ttatacttgc cgttagtagc tttttcataa gcactctctc cttttattta
     3241 tatcgtcttg tgctcacaac cattatacaa caatcatttc taaaacaaca gtcatattac
     3301 aattatatta caaataataa ttactacttt tatatttcac ttatcactaa aaattaaaca
     3361 tgcttttcat cgtgatgttt gttgataaat gcagctgtat cttcgacgaa tctttcttgc
     3421 tcttcaacaa atgggaatgc acttgattct tgatatactt caaagtccgc attttggatt
     3481 aaatcagcta cttctttagc ttctaatctt gttgttcttt caccgaattc tcctgcaata
     3541 atttttgtcg gtactacgac atttctataa gtttgagaaa tatcagcgtt tttgaatacc
     3601 tctttaactg cttgaatttc ttctttagtt gatatttcat ttgtatctac gacatgtttg
     3661 aggaatcgat tcatttttct cggacgataa tacttacgct tatttaaaaa tttatcttgt
     3721 ttttcaggat cccagtttcg aataatatgg gcatattttc taaataaacg ttcttccggt
     3781 aattcacctt caatagatgt tggatttacc aacgtaagtg atgatgtaaa ttcaggataa
     3841 cgtactgaaa tatccgcacc aatgattcca cccatttcat ggcatacaaa tgcaacttct
     3901 tcaatatata aatatttaag taattcaaca atgtcatcag aaaaatcttt tatttcaatg
     3961 tgacgaggtt tatcagaata gccatgtcca cgtaaatcaa ttaacacaac ttgaaatgat
     4021 tttgctaatt ctgctgctaa tttattaaac acagaataat tatcaagtac agtatgaatc
     4081 aatacgatag gatagccttc acctaatgta ctgtaatgta tcgatgttcc atcttttcta
     4141 gtaaatagat ccataatttt ctcctttatt atcatttttt attggtaaaa tggttaataa
     4201 ttcttccact gttgtaattg taaaatcaac ttcttcttcg agtggttcaa tttcagcatc
     4261 ttcttgttta taccatacac taaccatgcc catagctcgt gctggagcta catcatttaa
     4321 cgcatcatcg ccaacataca taatttgctc aggtaatacc cctagttgat caatcatatc
     4381 ttcaaaaatt ttaggatgtg gtttacgaaa accaactgtt tctgatgttg ataaataatt
     4441 aataacatgc atcaaaccaa gtgaatgtaa tcgaaattgt ttaatcttag atttaccatt
     4501 tgcgataaca ccaatttgaa agcctttttg cgatagcttt tctagtgtat acaaagtatc
     4561 gtaataagga aatacataac gataaaaatg catttcaaaa tcattaaata agtctttcca
     4621 agttaaccta tctacatgga aacgtttaat gatttcttta tataaatcag gtttatcatt
     4681 atcttcatcg tcatctagct caataaatgc ttttttaaaa tctgccagtt gaacatgaat
     4741 taagtagtca tgaaatcgtt catattgctc ttcgataaat ttctctcgag atttaactct
     4801 gtccaacaac gtaccttcta aatcaaatac aactgcttta atttgattca aatccatcgc
     4861 ttatgccctc tttatgttta tagttatttt tattttagca aatgtcgtgt gctagtgtaa
     4921 ccgtttcgac tgagatatta gcatgtaaaa taacactggt ataccaatta atgcaatgat
     4981 aatacttgcc ggtatttgta ctggtgacaa tatatggcta ccaataaaat ctgccataac
     5041 cattatttgt cctccagtta caatatttaa agccaattgt cttcctaatg attgtttcca
     5101 ctgccatttt ctaatgagtt gcggtatcac cataccaatg aatccaatga tgccaacata
     5161 tgcgacattt atcgccgtta tcatagaagc tatacataac gcgatatatg taatcaattg
     5221 aacatttaag cctagtgact gactttttag ttctcctaat tgcaataact ttagttgatt
     5281 aagaatgata aatataccaa acaatgcaat gataaatgtg attgctatta tagatacatt
     5341 tgagtattct gcatcaccaa aaccaccaaa cagataattg gcaattgtat ttaatttgcg
     5401 aggttttaat aaaatcaaaa aatatagaag tgaattgaat aacgcaccaa tcattaaacc
     5461 acttaatatt aagattctaa ctggatagcc ttggctcaat accgacgtaa tgactaatac
     5521 agttattaat gttatcaaac taaatgttat tgaaaataca ggaatccata acgttgttaa
     5581 acctaaaaat aatgctaatc ctgaaccaaa tgtagcgccg cttgccaatc ctaatgtaaa
     5641 gctatctgcc aatgcattat ttaaaactgt ttgaaatata aggcctgcaa cagttaatat
     5701 catacctgtc aacaatgctt ctaataatct cggtaatcta acattgatta aaatagactg
     5761 gttaaataca tcattgatat cgcccaactg ccaaaataga tatatgctag ttgttataat
     5821 caatatgact atccagctca ataatacttt attaaatgtc atagcattct cttttctttc
     5881 atcgataatt acattcatta tagcaatcac atactcgcgt tgctatcatt cactaaatat
     5941 attttaaaaa ccccttatct caaacatgta ttttttacat gtagcaataa ggggcataat
     6001 tagaatggtt tattttctat aaattgcatc tcttaattct tttaatcctt catcaatacg
     6061 tggacctggt cttgatactt catcaccatt tacaacttca atacgtgtat tcttgacagc
     6121 attaatttta ttgaatccac ctcttttttt gatgatatcc atataatctg atcttgtctt
     6181 agcttccgtc gaaattaata tatctgggtt ctttttaata atactttcct tcgttacagg
     6241 gttccaacca ttaatgtcac tatacacatt ttgggcttct aatttttcta acatatcatt
     6301 aaaaaatgta tgcttccctg ctgtatatat ttcaggcttt gatgaaacct caataaatac
     6361 ttttgatttt ttatgatgag caggaattga atctatgact ttatcgatat tatctttagt
     6421 ttcctcaaca agttgttcag cctgcttatc atgatgcgtt aatttcccaa tttgcttaaa
     6481 tgtgttgtaa gtttcatcaa ttgattgtgc atctttaaca tacactactt tgatgccttg
     6541 tttctctaat gatgacaata ctttattagc agttgccttt tgcgactcat gcgcaagaat
     6601 tagatctggc tttgccttta aaagttcctc tttatttaga ttcaaagcat caaattgttt
     6661 cttacccttt ttcacatctt ttggataatc atcaaccgtt gaaacaccaa ctatgtattt
     6721 acctaatcct aattcatata aaatttcagt attactaggc attaacgaaa caattctatg
     6781 gtacggcgat ttagacgagc cattatcatt gctaccttgt ttatcattat ctttcatacc
     6841 acagccactc aggacaagca taaaaatcaa aataaaagca attaacgatt tcttcacact
     6901 atcacatctc ctttttaatc ccacttttcg ctttagcgat tagagggatt tatgcagttg
     6961 tgcggtagca tccaactgcg ttcctcttca tctttagcga ttagaggctt ttatgcagtt
     7021 gtgccttagc atccaactgc gttcctcttc acctttagtg attagaggct tttatgcagt
     7081 tgctgcacaa acaactgtat tcctttactc cccttgagct ttagcgatta ggggctctta
     7141 tgcagttgct gcacaaacaa acaactgttt ttttctttat atgcttctat ttattatata
     7201 agtccacata ctaaaagaaa atagtaaatt attttttata tttcatataa actcatctat
     7261 ctaacttcac agcgtttact ttttaaagta aggttctaaa aaatcataat tctttatatc
     7321 tttgtctcta aagtaatgtt taccaaatac atctaacaga gcatgaaatt cattagcatc
     7381 ttgatttgta aaatgatttg gtaatgtgac tacttttttt aattgatcat aatttttagt
     7441 gttttcatat cctaatttat catatatttt tcttgtatag ctatctggaa taaattcaat
     7501 acgtccgaat atataaacaa gtaagacatc tgctgtttca cttccaatac ctttcaaaga
     7561 taataattct tttcttaatc cacctttata tcgctcatta atctcttgat aattgaaatg
     7621 atgtcgtgct aaccatgtta ataatgtttt aatcgtcagt gatttacttt tataaaagcc
     7681 acttgaatgt atcaatgatt gtaacgtttc aataggtagt tctaatatat gatttggatt
     7741 aaaatgcgta tgttctttaa tctgattcaa tgcaatttct gcatttcgcc atctagtatt
     7801 ttgaactaaa attgcaccta acatcatttc aatgtcatta tcagcaggcc accaaaattg
     7861 tggtccgaga tgttcatata aaactttata taattcatca gttcctaaca tttacaccct
     7921 ccattttaga gggagtggga cagaaatgat attatcgtaa aatttatttc gtcgtcccac
     7981 cccaacttgc attgtctgta gaaattggga atccaatttc tctttgttgg ggccccgccg
     8041 gcaaggttga ctagaattga aaaaagcttg ttacaagcga attttcgttc agtcaactac
     8101 tgccattata actttgtaga gcatagaaca ttgatttatg tctcaggctc tcttatgcag
     8161 ttgtgcagag catccaactg tgttcctctt aaccttattc acatactaag cattccccaa
     8221 tatgtcacat acctaaaaaa aacactccaa cacaaagtat ctttcgagaa actctacgtt
     8281 ggagtgtata taaatgttct tacattgatt caggtgcgct tacaccgacc attgccaatg
     8341 catttttcaa tgtaattctg accgcttcaa tcatagcaac atgtgctttt gttttttcaa
     8401 tatcatctgt taacactttt tcagcattat agaatttatg gaaatgagaa gctaaatctt
     8461 gaatataatt agtaattcta tgtgccgatc tatgctcagc agcactttca attgtaggtt
     8521 cgaaatcagc tacttttttc aacaattcaa tcgctttttc attagtaatc gttgtaaaat
     8581 cattcgcagc agtcacttca ataccttgct ctttcgcttg ttttaaaatt gaacaaatac
     8641 gcgcatgtgc atattgagca tagtaaactg gattgtcttg agattgctct ttcgctaatt
     8701 ccatatcaaa atcaaagtga ctatcaggac tacgcatagt taagaaataa cgtgcagcgt
     8761 caacgccaac ttcgtccata atttctctta atgtaatcgc attaccagta cgtttactca
     8821 tcttcacttc tttaccattt tccattaaac gaaccatttg catgatttga atttctaaac
     8881 gattactatc tacaccaaac gtttcaagag atgctttcaa acgattaata taaccatgat
     8941 gatcagcacc aaataaatcg attaaaatgt cattaccacg ttttacttta tcgaagtggt
     9001 acgcaatatc tggtaagaaa tacgtatatg taccgtcatt tttaattaat actctgtctt
     9061 tgtcgtcttt aaaatcagtt gtacgtaacc atgtagcgcc atcagcttca tacgtataac
     9121 ctaattcttt catttttgct aaaacttcaa gaatttctcc tttttcatat aaagatgttt
     9181 cactaaacca attatcaaaa tgcgtattga actctgctaa atcatttttc aatttagcca
     9241 tttcgtattc tacgcctaat tttctaaatt ctttcaaacg tgcttcttca gaataatctt
     9301 taatttcagg gtgtttctct gctaaatctt tacctatttc aataatatct tttccattat
     9361 agccatcttc tggcattgaa taactattgt cacctaaagc ttcaaagaaa cgtgtttcaa
     9421 tcgaacgcgc taagttagta atttgattac cagcatcatt aatataatat tcacgtgtta
     9481 cattatagcc agctgcagtt aaaatattag ctaaagcatc accaactgct gcatttctag
     9541 catgaccaat atgtaaatct cctgtagggt tagctgaaac atactcaagc aatacatttt
     9601 gaccttttga ttcatttaca tgtccaaatt gatcaccttt ttcaattgct tcaggaataa
     9661 ttgctgttaa atactgatta tctaagtaaa aattaatgaa tcctggacca gcaatgtcaa
     9721 tttgttttac atgtgctttt tcagtatcta agttatcaac aatcgcttga gcaatttcac
     9781 gaggattacg ctttgcaatc ttagtcagta ccatcgcaat attagtagca taatctccat
     9841 tttttgtatc tttaggaact tcaattttaa tatcaggaat ctcatctgct aatcctgctt
     9901 tgttaatact tgctgcaatt tcttctacta atgtttgttt cacttgatca ataatattca
     9961 ttcgcctatc tccttatagt taatttcata ttgataagaa cccatttttt cattatcttg
    10021 atataattca taatgaatct ttagcttgcc accgtctcca cttacgaaat gtaaaatgcg
    10081 taatgtttta acttctagtg gaattcgtcc agccgatata tcgtaaaaag ttgttgtcgt
    10141 ttgtccttca acaaaatgca aattcatatt aatgtcgcct ttacgaatca acttaacgct
    10201 atcatcatcc acttttattg taacattaac tgttgcatcc tcaatttgtt ctacataccg
    10261 aataaagtta gattgccttt gttgccaagt tccttcagta gtaaattcaa atttttcttt
    10321 ttcgttgtgc tgtttcaaca cttgctttgt ttgaatactt acttttttat ccaatttact
    10381 actcacctta atcttcgcat aatagaaata ttatagcata aaataaggtc atcttgttat
    10441 gccttcttaa agctaaatag gttcaattaa ttaacaattc catacttaat caacgcttca
    10501 tatatgtaag ccattttata aaatacaaac aacacctcaa aaccaaaaaa cacgagattt
    10561 tcactatctt tcatgaaaac ctcgtgtttg attataatga tagtgttcag agcactacct
    10621 tctttatcta tatagtcagt tgatattttt aaaatttaat aaccattcta ccagttatag
    10681 taccattttc catttcttca aaaatatcat tgatttcttc taattttctt aattgaactt
    10741 taggtgttac tttattttca gcagcaaatt caaacgcttc acgtaagtct tgtcttgtac
    10801 caacaagtga acctactact tcaataccat caagcactaa tcttgggata tctaagttca
    10861 ttttatcaac aggtaaacca acggcaacaa ctcttgcacc agcttttaca acatcaaccg
    10921 cttggttaaa tggcgtctta gcaactgaag ttaccactgt tgcatctaat cctttgttat
    10981 cagttaattt cataacttct gcaactggat caacatcttt agaattaata atagcatcag
    11041 cacctaattc tttcgcgaat gctaatttat catcattgat gtcgaaggca acaattttag
    11101 cccccataac gtttttagca tattgtaaag ctaggttacc taaaccacct ataccaaaaa
    11161 cacctaacca ttgtccaggt tttacattac ttacttttac agctttataa gttgtcacac
    11221 ctgcgcatgt aatagaagac gctgctgctg gatctaattt ttcaggtact ttcacagcat
    11281 agtctgcagt aacaataact tgttcagcca ttgcaccatc tactgtataa ccagcatttt
    11341 tcacactacg gcaaagtgtt tcacgacctg ttgtacaata ttcacatctt ccacagcttt
    11401 cgaacatcca agcgatagac acacggtctc caatttttaa tgattctaca tcttccgcaa
    11461 cttcgatgac tttaccaata ccttcatgac ctaaagtaac gcctgtaaca tcaccaaaat
    11521 cagcattctt aacatgtaaa tcggtatgac aaacgccaca atattccgtt tgtaccaacg
    11581 cttcaccagg ttttaaagct cttaactttt tgtcctcaat acttactttg tgatctttcg
    11641 ttacaactgc tgctctcata ataatgtcct ccttatagtc actccagtat gtatgatatt
    11701 aattggctat tactttcaaa aaagaaaacg aataattata gatgtaattt ttatttgtaa
    11761 tagacgccag attaaaacat actactgtga ccttgttttt agttagatat caaccgttaa
    11821 cttttaacgt ttccctagtt aatatgttaa aagaaatgac ataatcgata tgctaacgtg
    11881 taatttttac ttcacatata tttatttaaa gataatttat aatactctta tcttcactct
    11941 tattataatg tgaattaatt cacaaagtat atagctatga tcaaaaaaat gtgtcagtta
    12001 ttcaaatttt ttattaacta cagattaatt taatttcaaa aaaattaaaa aaactcccaa
    12061 tcaatctaag acattatttt cacctcacga tttacgtcgt cattgagaaa tgaatcatat
    12121 ctttatagat taattgggaa attttagttt ctaatattta attaaatgct tgatgtaaag
    12181 catcagaaga atgcttccac ataccttcat catggttcat taaaaagtct tttaaaatag
    12241 ctttattctc gtcaccaatt tgatctatga taatatgatg tttcattgat ttatccatca
    12301 tattaacatg ttcaggcata cttttataac cacgacgaat tgctttattc actaataaat
    12361 agcacgctgt taaaccagcg taatatggtc cttgttcatt acgttctgtt gttacccaac
    12421 acaaccaata ttctttagct tcatcgcctt caacagcagc tttatcagta atccatttca
    12481 cacctttttc aactttggca cgagcatgca tgcctccaat atcaataaat gcttctttgt
    12541 tagcaacatc gataaaaact ggtgcaatat tgtctaagct aattgaacca atatttgtac
    12601 ctttatgacc atctagaggg tcatttttta tgatattaaa attaaagcct tttttctcag
    12661 acaatgatat aacctccata tttaacgata acaattttag ccctgtttaa ttaagctcat
    12721 taatcaaatt ttcaatagct tctctaattg tcttatcttt aatctttgca accatttctc
    12781 taggataata taatttatag tcttggcgat taatgcctgt aatactatga atgactaatg
    12841 attgattgct tatttctcta atcgtaccat cttgtcttaa taaatgaatc ggtttgcgat
    12901 ttgaccccgg tcgatcatag tcatatggca aatcagaaaa tgcttcactc acaaaataat
    12961 aatctggatt aataccacct gcttcaaaca gttcttgcag ttctgatatt gtaataattg
    13021 agccatcaaa tggaatatat ttaaataagt ctcgattaat aaatcgactt gctaaatcac
    13081 ttaaaatagc atcatcttct tttgtccatt tttccaaata atacgtaact accgcttcat
    13141 cgagttcaac atattgttca atcgtaactg tctcttcaaa aaatggaata aaatcatgtg
    13201 gatgcaactt aaattcatag ccttcattat aaagctgttt tgcgcgtttc aaacaattat
    13261 taagcagcac ttctccacca cgactaactg ggtggaagta aatttgccaa tacatttgat
    13321 aacgactcat aataaagttt tcaactgcat gcataccact ttctttgatt agtacttcat
    13381 ctttagaagg tcgcattaat cttaaaatac gctccatatc aaaagcacca tatgatacac
    13441 ctgtgaaata cgcatcacgt tgtaaataat ccattctatc cgcatcgatt tgtgacgaaa
    13501 tcatcgaaat gaccaattta ttatgatgcg ttttattaat tacttccgca acttctcttg
    13561 gaaactcagg cgccacttta cgtaatacag cattcacctc agtatctcca gtaataatcg
    13621 cttgtgtgta tgcttcatgg tctgtattaa atattttttc aaaactatgt gaaaatggac
    13681 catgtcctaa atcatgtaat aatgcagcac ataatgccaa cggtctatct ttattgtccc
    13741 atgcatcatg accaataaat gactcatcaa ttaatcgtct aactatttca tacacaccta
    13801 aagaatgtcc aaagcgacta tgttctgctg tgtgaaaaga taggtacagt gttcctagtt
    13861 gtctaattcg acgtaacctt tggaattcct tagttttaat taaatcccat atcaattgat
    13921 cttcaacatg aatatatcga tgtatcgggt ctttaaaaac tttttcttct actaatttta
    13981 aatctacata tgcgttagtc attattcccc tccttttcgt ttaatataat atttaattta
    14041 cttaaaatgc tttgtacata agtgctaagt ctaacttttc gccatacatt tctggctcat
    14101 aagagcgtaa gattgtaaaa ccttgctctt tatagtaagc tactgcttct tcatttttat
    14161 tatctacttc taagtaaaca ccttcaaatt tatcttcaaa acgtgataat ccttcattta
    14221 acaatgctgt accataacct gtatgttgcg attctggttt aacataatga gctgataaat
    14281 ataattcttc accgtaaata aagttagcaa agccaacgat gtcattacct tcttcaacga
    14341 ctaagaataa ttgttcttga agtcttttct ttaaatgatg ttcattatat gaagcttcta
    14401 acaagtgatt aactgttgtc gcagcgtata tatttaagta tgtattaaac caagctttag
    14461 ttgcgacatc tctaatttga acaacatctt tttcagttgc ttgtcttacc ttgaacatga
    14521 ctttctcccc ttattaacaa gttttaataa cggcattata ccacaacttg ctcaatactt
    14581 aataaacaat gattgtctat tcaatttata tatttatatt ttccgttaaa attaaaaata
    14641 aaaaataacg aagcaaaaaa tcacttcgtt tagtatgagg tatgtcttat tgcaatatac
    14701 tattccactc agttgcacgt gctaaggcat agttgtcttt catgatgtca ccaggctttt
    14761 cagcagttcc aataatataa ccatttaaag tggcacctaa aaagtctaaa ctatatttca
    14821 tttgcgtaat tgctggcttc gcttttattt ttggacaatc tccaccaact aaaataactc
    14881 taaaatcctt ttcggccatt tgtgccttaa aattaggata tcgtttatct tgtaatgttt
    14941 ctgaccaatg ttcgataaat gctttcaatg gtgctgaaat gctataccaa tacactggtg
    15001 atgcaaaaat aattgtatca ctagccaata ttttatctag aatcggcaaa tagtcatcgt
    15061 catatgaagt aatagtctct gctgtatgtc tcacgtcacg tatcggttta aactgatgtt
    15121 gtgtcacgtc aatccattga tactctaaat cttgcaaagc gaattttgtt aattgtgcag
    15181 tattaccgtt tggtctactc ccaccaaaca aaacagtaat cattttagcc taacctcact
    15241 tttgattaat aaatatctgt gtttttcgtt acctaattat actatcataa gctttgccta
    15301 ccgaatagta aaacgcttac aacttttata taaatttgac gaaatttcgt catgccttat
    15361 ataacgtcgt ttgtgatacg gggctaattc atgatgaaat tagatacata tatcaccatt
    15421 aaatacaatt catttagtct tcaatcggaa acagttcatc gatatattga atctcatcat
    15481 ctgataaaac gatatctgca gctttaatat tttcaacgac ttgttctgca cgttttgcac
    15541 caggaataat cacatcgata gctggtctcg ttaaataaaa tgctaataca atgttcgcaa
    15601 ttgaagtttg atgtgctgca gctatgcttt ccaaagcttt tacgcgacgc acattttctt
    15661 caaatacacc tggtttaaaa tcacgacgtg tagtacgatg gtcactaaat ttagtgttct
    15721 catcatattt tccagctaaa ataccggatg ctaatgggaa atatggaata aatgtgattt
    15781 ggtgatcaac acaatattgt aatactgcct cattttcgcg atgcaataaa ttatattcta
    15841 actgtacaac atcaacgtaa ccatctttat ttgcttcttt aagttgatct aatgtgaaat
    15901 ttgatacacc aattgcttta atcttccctt gttccttaag ctcttgtaat gctgcaactg
    15961 cttgatcttt cggagtgttg ttatccggaa aatgaatata atataaatcg atataatcag
    16021 tttgtagacg tttcaaacta ttctcaactt gttgttttaa atattccggt tgattgttct
    16081 gatgtacttc ttgattttca tcaaattcat gagacccttt cgtagcaatt ttaatttgct
    16141 ctcgcggata ttctttaaca acttctccaa ccaattcttc tgatcgttct ggcccataaa
    16201 tatatgccgt atctaataaa ttaataccat gattaatggc ttgacgaaca acatcttttc
    16261 cttgttcttc atctaagttc ggatataaat tatgcccacc tactgcgttc gtcccaagtg
    16321 cgattggaaa cacttcaaca tcagatttac ctaagtttac aaattgcttc attagaccca
    16381 gctccttatc tttataactt ttccactatc acactatcat gatttaatac aacttccaaa
    16441 tgttagaatt agagcttgaa tttaagcggt gtaataggaa aacgttatat aaaactcagt
    16501 taaaataagt attgcttaaa ttgatatgca tatagcgcga ttgctcgttg acctttaaat
    16561 tacatgtact tttgaatcag aaattgaaaa acatttaaga acgacaatat taaagccatt
    16621 gcaaatttaa tttggta
//
LOCUS       DALPQQ010000052        16525 bp    DNA     linear   BCT 22-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus strain K18-6-464
            SAMD00233528-rid16434743.denovo.052, whole genome shotgun sequence.
ACCESSION   DALPQQ010000052 DALPQQ010000000
VERSION     DALPQQ010000052.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMD00233528
            Sequence Read Archive: DRR236061
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 16525)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 16525)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001543423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001543423.1
            Genome Coverage       :: 77x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/22/2022 17:09:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,811
            CDSs (total)                      :: 2,743
            Genes (coding)                    :: 2,689
            CDSs (with protein)               :: 2,689
            Genes (RNA)                       :: 68
            rRNAs                             :: 2, 4, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 4, 2 (16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 54
            CDSs (without protein)            :: 54
            Pseudo Genes (ambiguous residues) :: 0 of 54
            Pseudo Genes (frameshifted)       :: 27 of 54
            Pseudo Genes (incomplete)         :: 27 of 54
            Pseudo Genes (internal stop)      :: 10 of 54
            Pseudo Genes (multiple problems)  :: 10 of 54
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..16525
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMD00233528-rid16434743.denovo.052"
                     /strain="K18-6-464"
                     /db_xref="taxon:1280"
                     /geo_loc_name="Japan: Niigata"
     gene            complement(440..538)
                     /locus_tag="O7798_001399"
     CDS             complement(440..538)
                     /locus_tag="O7798_001399"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499028.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDC2863665.1"
                     /translation="MNWIIELDLWLWCVGAINLINAVNDYANEILL"
     gene            complement(743..1339)
                     /gene="recR"
                     /locus_tag="O7798_001400"
     CDS             complement(743..1339)
                     /gene="recR"
                     /locus_tag="O7798_001400"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009383386.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="recombination protein RecR"
                     /protein_id="HDC2863666.1"
                     /translation="MHYPEPISKLIDSFMKLPGIGPKTAQRLAFHTLDMKEDDVVQFA
                     KALVDVKRELTYCSVCGHITENDPCYICEDKQRDRSVICVVEDDKDVIAMEKMREYKG
                     LYHVLHGSISPMDGIGPEDINIPSLIERLKNDEVSELILAMNPNLEGESTAMYISRLV
                     KPIGIKVTRLAQGLSVGGDLEYADEVTLSKAIAGRTEM"
     gene            complement(1346..1663)
                     /locus_tag="O7798_001401"
     CDS             complement(1346..1663)
                     /locus_tag="O7798_001401"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002479279.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YbaB/EbfC family nucleoid-associated protein"
                     /protein_id="HDC2863667.1"
                     /translation="MRGGGNMQQMMKQMQKMQKKMAQEQEKLKEERIVGTAGGGMVAV
                     TVTGHKEVVDVEIKEEAVDPDDIEMLQDLVLAATNEAMNKADELTQERLGKHTQGLNI
                     PGM"
     gene            complement(1753..3450)
                     /gene="dnaX"
                     /locus_tag="O7798_001402"
     CDS             complement(1753..3450)
                     /gene="dnaX"
                     /locus_tag="O7798_001402"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001109032.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit gamma/tau"
                     /protein_id="HDC2863668.1"
                     /translation="MNYQALYRMYRPQSFEDVVGQEHVTKTLRNAISKEKQSHAYIFS
                     GPRGTGKTSIAKVFAKAINCLNSTDGEPCNECHICKGITQGTNSDVIEIDAASNNGVD
                     EIRNIRDKVKYAPSESKYKVYIIDEVHMLTTGAFNALLKTLEEPPAHAIFILATTEPH
                     KIPPTIISRAQRFDFKAISLDQIVERLKFVADAQQIECEDEALAFIAKASEGGMRDAL
                     SIMDQAIAFGDGTLTLQDALNVTGSVHDEALDHLFDDIVQGDVQASFKKYHQFITEGK
                     EVNRLINDMIYFVRDTIMNKTSEKDTEYRALMNLELDMLYQMIDLINDTLVSIRFSVN
                     QNVHFEVLLVKLAEQIKGQPQVIANVAEPAQIASSPNTDVLLQRMEQLEQELKTLKAQ
                     GVSVAPVQKSSKKPARGIQKSKNAFSMQQIAKVLDKANKADIKLLKDHWQEVIDHAKN
                     NDKKSLVSLLQNSEPVAASEDHVLVKFEEEIHCEIVNKDDEKRSSIESVVCNIVNKNV
                     KVVGVPSDQWQRVRTEYLQNRKNEGDDMPKQQAQQTDIAQKAKDLFGEETVHVIDEE"
     gene            complement(3519..4043)
                     /locus_tag="O7798_001403"
     CDS             complement(3519..4043)
                     /locus_tag="O7798_001403"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499024.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetyltransferase"
                     /protein_id="HDC2863669.1"
                     /translation="MQIYLSTLTELDYDKSLNSIEESFDDNPETSWQARAKVKHLRKS
                     PCYNFELEVIAKNENNDVVGHVLLIEVEINSDDKTYYGLAIASLSVHPELRGQKLGRG
                     LVQAVEERAKAQEYSTVVVDHCFDYFEKLGYQNAAEHDIKLESGDAPLLVKYLWDNLT
                     DAPHGIVKFPDHFY"
     gene            complement(4181..4282)
                     /locus_tag="O7798_001404"
     CDS             complement(4181..4282)
                     /locus_tag="O7798_001404"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499023.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDC2863670.1"
                     /translation="MKTIQRIIRGTCLWEVAFLYVKFDSSELDVQFE"
     gene            complement(4351..4620)
                     /gene="ffs"
                     /locus_tag="O7798_001405"
     ncRNA           complement(4351..4620)
                     /ncRNA_class="SRP_RNA"
                     /gene="ffs"
                     /locus_tag="O7798_001405"
                     /product="signal recognition particle sRNA large type"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF01854"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF01854"
     gene            complement(4682..5410)
                     /gene="treR"
                     /locus_tag="O7798_001406"
     CDS             complement(4682..5410)
                     /gene="treR"
                     /locus_tag="O7798_001406"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499022.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="trehalose operon repressor"
                     /protein_id="HDC2863671.1"
                     /translation="MAKQKKFMKIYEALKEDILNGQIQYGEQIPSEHDLVQLYQSSRE
                     TVRKALDLLALDGMIQKIHGKGSLVIYQEVTEFPFSELVSFKEMQEEMGVAYLTEVVV
                     NEVVEAHEVPEVQHALNINSSESLIHIVRTRRLNQHVKIVDEDYFLKSIVSDIGNDVA
                     SDSIYDYLEKVLNLNISYSSKSITFEPFDEQAYQLFGDVSVAYSATVRSIVYLENTMP
                     FQYNISKHLANEFKFNDFSRRRIK"
     gene            complement(5435..7075)
                     /gene="treC"
                     /locus_tag="O7798_001407"
     CDS             complement(5435..7075)
                     /gene="treC"
                     /locus_tag="O7798_001407"
                     /EC_number="3.2.1.93"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499021.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha,alpha-phosphotrehalase"
                     /protein_id="HDC2863672.1"
                     /translation="MSKEIDWRKSVVYQIYPKSFNDTTGNGIGDINGIIEKLDYIKLL
                     GVDYIWLTPVYESPMNDNGYDISNYLEINEDFGTMDDFEKLIKVAHQKDLKVMLDIVI
                     NHTSTEHEWFKEARKSKDNPYRDYYFFRSSEDGPPTNWHSKFGGNAWKYDSETDEYYL
                     HLFDVSQADLNWDNPEVRQSLYRIVNHWIDFGVDGFRFDVINLISKGEFKDSDKIGKE
                     FYTDGPRVHEFLHELNRQTFGNTDMMTIGEMSSTTIENCIKYTQPERQELNSVFNFHH
                     LKVDYVDGEKWTNAKLDFHKLKEILMQWQRGIYDGGGWNAIFWCNHDQPRVVSRFGDD
                     TSEEMRIQSAKMLAIALHMLQGTPYIYQGEEIGMTDPHFTSIAQYRDVESINAYHQLL
                     SEGHAEADVLAILGQKSRDNSRTPMQWSDDVNAGFTAGKPWIDISENYHQVNVRQALQ
                     NKESIFYTYQKLIQLRHTHDIITYGDIVPRFMDHDHLFVYERHYKNQQWLVIANFSAS
                     AVDLPEGLAREGCVVIQTGTVENNTISGFGAIVIETNA"
     gene            complement(7139..8566)
                     /gene="treP"
                     /locus_tag="O7798_001408"
     CDS             complement(7139..8566)
                     /gene="treP"
                     /locus_tag="O7798_001408"
                     /EC_number="2.7.1.201"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499020.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS system trehalose-specific EIIBC component"
                     /protein_id="HDC2863673.1"
                     /translation="MAVKREDVKAIVTAIGGKENLEAATHCVTRLCLVLKDESKVDKD
                     ALSNNALVKGQFKADHQYQIVIGPGTVDEVYKQFIDETGAQEASKDEAKQAAAQKGNP
                     VQRLIKLLGDIFIPILPAIVTAGLLMGINNLLTMKGLFGPKALIEMYPQIADISNIIN
                     VIASTAFIFLPALIGWSSMRVFGGSPILGIVLGLILMHPQLVSQYDLAKGNIPTWNLF
                     GLEIKQLNYQGQVLPVLIAAYVLAKIEKGLNKVVHDSIKMLVVGPVALLVTGFLAFII
                     IGPVALLIGTGITSGVTFIFQHAGWLGGAIYGLLYAPLVITGLHHMFLAVDFQLMGSS
                     LGGTYLWPIVAISNICQGSAAFGAWFVYKRRKMVKEEGLALTSCISGMLGVTEPAMFG
                     VNLPLKYPFIAAISTSCVLGAIVGMNNVLGKVGVGGVPAFISIQKEFWPVYLIVTAIA
                     IVVPCILTIVMSHFSKQKAKEIVED"
     gene            complement(9037..9129)
                     /locus_tag="O7798_001409"
     tRNA            complement(9037..9129)
                     /locus_tag="O7798_001409"
                     /product="tRNA-Ser"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(9091..9093),aa:Ser,seq:tga)
     gene            complement(9398..10861)
                     /locus_tag="O7798_001410"
     CDS             complement(9398..10861)
                     /locus_tag="O7798_001410"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499019.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate synthase subunit beta"
                     /protein_id="HDC2863674.1"
                     /translation="MGEFKGFMKYDKQYLGELSLVDRLKHHKAYQQRFTKEDASIQGA
                     RCMDCGTPFCQTGQQYGRETIGCPIGNYIPEWNDLVYHQDFKTAYERLSETNNFPDFT
                     GRVCPAPCESACVMKINRESIAIKGIERTIIDEAFENGWVAPKVPSRRRDEKVAIVGS
                     GPAGLAAAEELNLLGYQVTIYERARESGGLLMYGIPNMKLDKDVVRRRIKLMEEAGIT
                     FINGVEVGVDIDKATLESEYDAIILCTGAQKGRDLPLEGRMGDGIHFAMDYLTEQTQL
                     LNGEIDDITITAKDKNVIIIGAGDTGADCVATALRENCKSIVQFNKYTKLPEAITFTE
                     NASWPLAMPVFKMDYAHQEYEAKFGKEPRAYGVQTMRYDVDDKGHIRGLYTQILEQGE
                     NGMVMKEGPERFWPADLVLLSIGFEGTEPTVPNAFNIKTDRNRIVADDTNYQTNNEKV
                     FAAGDARRGQSLVVWAIKEGRGVAKAVDQYLASKVCV"
     gene            complement(10879..15378)
                     /gene="gltB"
                     /locus_tag="O7798_001411"
     CDS             complement(10879..15378)
                     /gene="gltB"
                     /locus_tag="O7798_001411"
                     /EC_number="1.4.1.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499018.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate synthase large subunit"
                     /protein_id="HDC2863675.1"
                     /translation="MHNEKLIKGLYDYREEHDACGIGFYANMDNKRSHDIIDKSLEML
                     RRLDHRGGVGADGITGDGAGIMTEIPFAFFKQHVTDFDIPGEGEYAVGLFFSKERILG
                     SEHEVVFKKYFEGEGLSILGYRNVPVNKDAIAKHVADTMPVIQQVFIDIRDIEDVEKR
                     LFLARKQLEFYSTQCDLELYFTSLSRKTIVYKGWLRSDQIKKLYTDLSDDLYQSKLGL
                     VHSRFSTNTFPSWKRAHPNRMLMHNGEINTIKGNVNWMRARQHKLIETLFGEDQHKVF
                     QIVDEDGSDSAIVDNALEFLSLAMEPEKAAMLLIPEPWLYNEANDANVRAFYEFYSYL
                     MEPWDGPTMISFCNGDKLGALTDRNGLRPGRYTITKDNFIVFSSEVGVVDVPESNVAF
                     KGQLNPGKLLLVDFKQNKVIENNDLKGAIAGELPYKAWIDNHKVDFDFENIQYQDSQW
                     KDETLFKLQRQFAYTKEEIHKYIQELVEGKKDPIGAMGYDAPIAVLNERPESLFNYFK
                     QLFAQVTNPPIDAYREKIVTSELSYLGGEGNLLAPDETVLDRIQLKRPVLNESHLAAI
                     DQEHFKLTYLSTVYEGDLEDALEALGREAVNAVKQGAQILVLDDSGLVDSNGFAMPML
                     LAISHVHQLLIKADLRMSTSLVAKSGETREVHHVACLLAYGANAIVPYLAQRTVEQLT
                     LTEGLQGTVVDNVKTYTDVLSEGVIKVMAKMGISTVQSYQGAQIFEAIGLSHDVIDRY
                     FTGTQSKLSGISIDQIDAENKARQQSDDNYLASGSTFQWRQQGQHHAFNPESIFLLQH
                     ACKENDYAQFKAYSEAVNKNRTDHIRHLLEFKACTPIDIDQVEPVSDIVKRFNTGAMS
                     YGSISAEAHETLAQAMNQLGGKSNSGEGGEDAKRYEVQVDGSNKVSAIKQVASGRFGV
                     TSDYLQHAKEIQIKVAQGAKPGEGGQLPGTKVYPWIAKTRGSTPGIGLISPPPHHDIY
                     SIEDLAQLIHDLKNANKDADIAVKLVSKTGVGTIASGVAKAFADKIVISGYDGGTGAS
                     PKTSIQHAGVPWEIGLAETHQTLKLNDLRSRVKLETDGKLLTGKDVAYACALGAEEFG
                     FATAPLVVLGCIMMRVCHKDTCPVGVATQNKDLRALYRGKAHHVVNFMHFIAQELREI
                     LASLGLKRVEDLVGRTDLLQRSSTLKANSKAASIDVEKLLCPFDGPNTKEIQQNHNLE
                     HGFDLTNLYEVTKPYIAEGRRYTGSFTVNNEQRDVGVITGSEISKQYGEAGLPENTIN
                     VYTNGHAGQSLAAYAPKGLMIHHTGDANDYVGKGLSGGTVIVKAPFEERQNEIIAGNV
                     SFYGATSGKAFINGSAGERFCIRNSGVDVVVEGIGDHGLEYMTGGHVINLGDVGKNFG
                     QGMSGGIAYVIPSDVEAFVENNQLDTLSFTKIKHQEEKAFIKQMLEEHVSHTNSTRAI
                     HVLKHFDRIEDVVVKVIPKDYQLMMQKIHLHKSLHDNEDEAMLAAFYDDSKTIDAKHK
                     PAVVY"
     gene            15560..16444
                     /locus_tag="O7798_001412"
     CDS             15560..16444
                     /locus_tag="O7798_001412"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499017.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HDC2863676.1"
                     /translation="MEIKQLRYFIEVAKREHISETALELNIAQSAISRQITLLEQELN
                     VSLFKKQGRNITLTSEGKLLFNEALRIIEHLDSTIEQFQSHGLTKNKSIYIGYDESDV
                     SHMLLPLIQTFHLQNDTHVIPSLLEHDTIINSVLNGNIDIGFTELTPEIRKHKQLHML
                     PLFEEHYHLYAPSDDPITMATHPPLIQFEHSHIYCLAPFAETVKKQLRKITKSDVYTI
                     SSQPLAQYLLRQKEGYIISSQNIHLPESKSWIDIKLDHTELKRTICAITKEPYTKSDI
                     GILLTLIQQLMTKTSTFH"
BASE COUNT         5137 a         3622 c         2311 g         5455 t
ORIGIN      
        1 cttaccgaca agaattaatt atacatttta ttaacattta agtcaataac tttttaaaat
       61 taattttcgt tagtaattca agttatttct taagttgagt tgttttgttt gcctcaacaa
      121 ataaatacta tacaggcttt caaactgctt aacaacagta aaaattacac ctttgtcatc
      181 tgtactgaac gcccttatcc taaaaatcga acttaaaaaa cccccactta taaatagtac
      241 gttttttaga acaagaaaca gatttttctc taaccatatc aatcaaaaaa aacgcaaaac
      301 agaacgttat ttttttacca gaaattaaaa ataaatttac aagttttaaa taatctctca
      361 aaacaccgct atacaggctg atttaataag ctttagacca aagaagtaca acttactaag
      421 ccagcatcta tcatttcaat tacaaaagaa tttcatttgc atagtcatta accgcattta
      481 tcaaattaat agcaccaaca caccataacc atagatctaa ttcgataatc caattcacat
      541 cattactatt agaagtaaca aatcacaacc aacggcttgc ttcctaaaga ttacccatcc
      601 ctcagtaaaa ctaggtaaac cataccaccg ccacaccgca aataaagtag tacatcacac
      661 cacaccataa aaaaagccac aatgattaca ctgtgacttt tcttactata gtattaaaat
      721 caaaaatgtt taatagaaga cattacattt ctgttctacc tgcgattgct ttagataatg
      781 ttacttcgtc agcatactct aaatcgccac ctaccgataa cccttgtgct aatctcgtca
      841 ctttgatacc tataggctta actaatctag aaatatacat ggctgtagat tccccctcta
      901 agttcgggtt catagctaag attaattcgc taacttcatc gtttttcaag cgttcaatca
      961 atgaaggaat attaatatct tctggtccaa tgccatccat aggcgaaata gacccatgta
     1021 aaacgtgata taaacctttg tattctctca ttttttccat agctatgaca tctttgtcat
     1081 cttccacaac acaaataact gaacgatctc tttgcttatc ttcacaaata taacatggat
     1141 cattttcagt aatgtgacca catacgctac aatatgttaa ttctctctta acatctacta
     1201 atgctttggc aaactgaaca acatcgtctt ctttcatatc taaggtatga aaagccagac
     1261 gttgggctgt ctttggacca atgcctggca atttcataaa gctatcaata agttttgata
     1321 taggttctgg ataatgcatc tatgatcaca ttccagggat gtttaagcct tgagtatgtt
     1381 tacctaaacg ttcttgagta agctcatcag ctttattcat cgcttcatta gtagctgcta
     1441 acactaagtc ttgtagcatt tcaatatcgt ctgggtctac agcttcttct ttgatttcaa
     1501 cgtcgacaac ttctttatga ccagttacag taactgcaac catgccaccg ccagctgttc
     1561 ctacaatacg ctcttcttta agtttttctt gttcttgagc cattttcttt tgcatttttt
     1621 gcatttgttt catcatttgt tgcatgtttc cgccaccgcg catattccat ttcctccttg
     1681 aaaatcaata aatatttatc aataaaatga tgtttctttc attatacata cgattatatc
     1741 gcttgtcatg tatcactctt catctatcac atgtacagtt tcttcaccga aaagatcttt
     1801 tgctttttga gcaatatctg tttgttgtgc ttgttgcttt ggcatatcat cgccttcgtt
     1861 tttacgattt tgtaaatatt ccgttcgaac tctttgccat tgatctgatg gtacaccaac
     1921 aactttaacg tttttattaa cgatattaca tacaacactt tctatactac tacgtttctc
     1981 gtcgtcttta ttgacgattt cacaatggat ctcttcctca aatttcacaa gtacgtgatc
     2041 ttcacttgcc gccacaggtt ccgaattttg caataaacta acgagtgatt ttttatcatt
     2101 atttttggca tgatcaatca cttcttgcca atgatctttc aacaatttga tatctgcctt
     2161 attcgcttta tctagcactt ttgcaatttg ttgcattgaa aatgcatttt tagatttttg
     2221 tatgcctctc gcaggctttt tcgaagattt ttgaacagga gcgacactca ctccttgtgc
     2281 ttttagtgtt tttagttctt gctctaactg ttccatacgt tgcaacaata catctgtgtt
     2341 tggcgatgaa gcaatttgtg ctggttcagc tacattcgca atcacttgtg gttgaccctt
     2401 aatctgctca gctaatttta ctaacaacac ttcaaaatga acgttttgat tcacactaaa
     2461 acgaatcgac actaatgtat cattaataag atcaatcatt tgatataaca tatctaattc
     2521 taagttcatc agtgctcgat actcagtatc tttctcagat gttttattca taatcgtatc
     2581 tctgacaaaa taaatcatat catttattag gcgattcact tctttacctt ctgttataaa
     2641 ctgatggtat tttttaaaag atgcttgtac gtcaccttgt acaatatcat caaacaagtg
     2701 atccaacgct tcatcatgta cgctacctgt gacattcaac gcatcttgca atgttaacgt
     2761 accatcacca aatgcaatag cctgatccat aatacttaat gcatcacgca tacccccttc
     2821 agacgcttta gcgataaatg ccaaggcttc atcttcacat tcaatttgtt gtgcatctgc
     2881 tacaaatttt aaacgttcaa caatttgatc taggctaatt gctttaaaat caaaacgttg
     2941 tgccctagaa atgattgttg gagggatttt atgtggttct gtcgttgcca atataaaaat
     3001 agcgtgtgct ggaggttctt ctaacgtctt taaaagggca ttaaaagcac ctgttgttag
     3061 catgtgcacc tcatctataa tataaacttt atatttcgat tcacttggtg catatttaac
     3121 tttgtctcta atatttctta tttcatcaac gccattatta ctagcagcat caatttctat
     3181 cacatctgaa ttagtcccct gcgtaatgcc tttacaaata tgacattcat tacaaggttc
     3241 tccatcagtg ctatttagac agttgattgc tttagcaaac actttggcaa tactcgtttt
     3301 ccccgtacct ctcggaccac taaaaatata agcatgcgac tgtttttctt tcgaaatcgc
     3361 attgcgcaat gtcttcgtga catgttcttg tccgacgaca tcctcgaaac tttggggtct
     3421 gtacatacga tataaggctt gataattcaa gttagcacct ccataaacaa ttacctctca
     3481 ttatagcatg ataatacctt tacttcttaa ttgaacaatt aataaaaatg gtctggaaat
     3541 tttacgattc cgtgtggtgc atccgtcaaa ttatcccata aatattttac aagtaacggt
     3601 gcatcaccag attctaattt aatgtcatgc tcagcagcat tttgataacc caacttttca
     3661 aagtagtcaa aacaatggtc tacaacaacc gtactatact cttgtgcttt ggcacgctct
     3721 tctactgctt gaaccaagcc acgacctaat ttttgtccac gtaattcagg atgaactgat
     3781 aaagaggcaa tcgccaaacc ataatacgtc ttatcatcac tattaatttc tacttcaatt
     3841 aataaaacgt gtccaacgac atcgttattt tcatttttcg ctattacttc taattcaaaa
     3901 ttatagcaag gagattttct taaatgtttt actttcgcac gtgcttgcca actcgtttca
     3961 ggattatcat caaaactttc ttcaatacta tttaaagatt tatcataatc taactctgtt
     4021 aaagtactta aatatatttg catatgtcct ccgtaggcat ttgattgtca ataatcataa
     4081 cgtatctcat taataattct attgtaagat actccccctc atttcaccat catttcttta
     4141 tcatcaaatt ataacttctt acttttcatt gacacaaaaa tcattcaaac tgcacatcga
     4201 gttcacttga atcaaacttc acatataaaa aagctacttc ccacaaacat gttccacgta
     4261 taatacgctg aattgtcttc aagaaagtag cttctataat tatatatttt caactcttaa
     4321 taatcggttt aatatttaaa aaataaaaaa ccgtgcacct aagcatcgaa cgtaattcac
     4381 gaacgtaacc aaagtcgtta gctaaatctc ggctacccta cggcacatat gatgatccac
     4441 ttaatgctgc ttccgtcagg acctgacatg gttcatgggt tcatattgca taggaccgaa
     4501 atcttcaaac actacgtgct ttgggcagac ttcgcaaaaa tacggcctca acaaaggaat
     4561 taagcctcgc ataaagcgga tttcgagtac agggaaccgc tacctcccca cctagcacgg
     4621 caagatatat attactatat tttaatagtt aattgcaagt ataaatcatt tatatcattg
     4681 tttactttat acgacgtctt gagaagtcat taaatttaaa ttcatttgca agatgttttg
     4741 aaatattata ttgaaacggc attgtatttt ctaaatacac aatacttcga actgttgctg
     4801 aataagccac cgatacatca ccaaacaatt gatatgcttg ttcatcaaac ggttcaaaag
     4861 taatagactt acttgaataa ctaatattaa gatttaatac cttttccaaa taatcataaa
     4921 tagaatcact cgcaacatca ttacctatat ctgaaacaat cgactttaga aaataatctt
     4981 catcaacaat cttcacatgt tggttaagcc gacgagttct aacaatatga atgagtgatt
     5041 cactagaatt gatgtttaaa gcatgttgaa cttctggaac ttcatgcgct tcaacaacct
     5101 cattcacaac aacttcagtt aaatatgcga cgcccatttc ttcttgcatt tctttaaaac
     5161 taacaagttc agaaaatgga aactctgtaa cctcctgata aatgacaagt gaccctttac
     5221 catgaatctt ttgaatcatg ccgtctaatg ccaacaaatc taatgcctta cgcacggtct
     5281 ctcgagatga ctggtacaat tgcaccaaat catgttcaga cggaatttgt tcaccatatt
     5341 gaatctgccc gtttaatata tcttctttca acgcctcata aatcttcata aacttttttt
     5401 gtttcgccat ataaacgcat ccactcaatt tattttacgc gtttgtttcg attacaattg
     5461 caccaaaccc gcttatcgta ttattttcca ctgtgcctgt ttgaatcaca acacaacctt
     5521 ctctagccaa tccttctggc aaatcaacag ccgatgctga gaaattcgca attactagcc
     5581 attgttgatt cttataatga cgttcataaa caaataaatg atcatgatcc ataaaacgtg
     5641 gcacaatgtc tccatacgta ataatatcat gcgtatgtct taattgtatt aatttttgat
     5701 acgtatagaa aatagactct ttattctgaa gtgcttgtct aacgttgacc tgatgataat
     5761 tttccgaaat atcaatccaa ggcttaccag ctgtaaatcc agcattaaca tcatcactcc
     5821 attgcatagg cgttctcgaa ttgtctcgtg acttctgtcc taaaatcgct aacacatccg
     5881 cttcagcatg cccttcactt aacaactgat ggtaggcatt aatcgattca acatcacgat
     5941 attgtgctat tgatgtaaaa tgtgggtccg tcataccaat ttcttcacct tggtaaatat
     6001 atggcgtccc ttgcaacata tgcagtgcga tagctaacat tttagcactt tgtatcctca
     6061 tctcttccga cgtatcatca ccaaatctag acactacccg tggctgatca tgattacacc
     6121 agaaaatcgc gttccatccg ccaccgtcat aaatacctcg ttgccattgc atcagaattt
     6181 cctttaactt atgaaaatca agcttcgcat ttgtccactt ttcaccatca acataatcaa
     6241 cctttagatg atgaaaatta aaaacactat tcaattcttg gcgttctggt tgtgtatact
     6301 taatacaatt ttcaatcgtc gtcgaagaca tttctcctat agtcatcatg tcagtgttac
     6361 caaacgtttg acgatttaat tcatgcagaa actcatgcac tctaggacca tccgtataaa
     6421 attctttacc tattttgtca gagtccttaa attcaccttt agaaattaag ttaatgacat
     6481 caaatcgaaa accatcaacg ccgaagtcta tccaatgatt gactatgcga tataacgatt
     6541 gacgtacttc cggattatcc caatttaaat cagcttgact gacatcaaat aaatgtaaat
     6601 aatattcatc tgtctcagaa tcatacttcc atgcattacc accgaattta gaatgccaat
     6661 ttgttggcgg cccgtcttca gatgatctga aaaagtaata atctctataa gggttatctt
     6721 tagatttacg ggcttcttta aaccattcat gctccgtcga cgtatgatta atgacaatat
     6781 ctaacatcac tttcaagtct ttttgatgcg caactttgat taacttttca aaatcatcca
     6841 tcgttccaaa gtcttcattg atttctaaat aattgctgat atcatagcca ttatcattca
     6901 tcggtgattc atacactggt gttaaccaaa tataatcaac acccaataac ttgatataat
     6961 ccaatttttc tataattcca ttgatatctc ctataccatt ccccgtcgta tcattaaacg
     7021 acttaggata aatttgatat acaacggatt ttctccaatc tatttctttc gacacacaat
     7081 taccacctta taacgtaata aaggacgtcc aaataacgaa cgcccctttt ttattttatt
     7141 aatcttcaac aatttctttc gctttttgtt tactaaaatg agacatcaca attgttagta
     7201 tacatggtac aacaatagca atagctgtca caataagata tactggccaa aattcttttt
     7261 gaattgaaat gaatgctggc acgccaccaa caccaacttt tccaagtacg ttattcatac
     7321 caacgattgc ccccaataca caagacgttg atatcgcagc gataaatgga tatttcagag
     7381 gtaagttcac accgaacatg gctggttcag taacacctaa cataccagaa atacaagatg
     7441 ttaatgccaa gccttcttct ttaaccattt tacgacgttt atagacaaac catgctccaa
     7501 atgctgcaga gccctgacaa atattggaaa tcgcaacaat tggccataaa tacgtaccgc
     7561 ctaagctgct acccatcaat tggaaatcta ctgctaaaaa catatggtgt agtcctgtaa
     7621 ttacaagtgg tgcatataac aatccatata ttgctccgcc aagccatcct gcatgttgga
     7681 atataaatgt aacaccagat gtaatacctg taccaatcaa taacgcaact ggtccaatga
     7741 taataaatgc taaaaatcca gtaactaaaa gcgctacggg tccaacgacc aacattttta
     7801 tcgaatcgtg aacgacttta tttaatcctt tttcaatttt agctagaacg taagctgcaa
     7861 ttaaaactgg caacacttga ccttggtaat tcaactgctt aatctctaag ccaaataagt
     7921 tccacgtcgg aatattccct tttgccaaat catactgaga tactaattgc ggatgcatta
     7981 aaatcaaacc taagactatg cctagaatcg gactaccacc aaatacacgc atactactcc
     8041 aaccaattaa tgctggtaag aaaataaatg ccgtactcgc aatcacatta atgatgtttg
     8101 aaatatcagc aatttgtgga tacatctcaa taagtgcttt tggaccaaat aaacctttca
     8161 ttgtaagtaa attattgatt cccattaaca aaccagctgt cacaatcgca ggtaatattg
     8221 gtataaaaat atcccccaac aatttgatca aacgttgtac tggattccct ttttgtgcag
     8281 ctgcttgttt cgcttcatct ttcgaagctt cttgagcacc tgtttcatca ataaactgct
     8341 tatacacttc atcgactgtt cctggaccaa tgacaatttg atattgatgg tctgctttaa
     8401 actgcccctt gaccaacgcg ttattactta atgcgtcttt atcaacttta ctttcatcct
     8461 tcagcactaa acataatcgt gttacacaat gcgttgcagc ttcaagattt tcttttcccc
     8521 caatagcggt tacgatggct tttacatctt ctctttttac agccatatat ttcactccct
     8581 taatgtctta aaacgagtat aacttgtcta gacaagttat gtaaaggctt tcaacaaaat
     8641 atttttattt tgtcacaatt atctggggta gccatttcag aaaatcaatg agccataacg
     8701 acatatgtag caataactcc tcgctacaat tgcgttatta acaatacctc accacgctct
     8761 caccattata aagtgtagat gcatggccaa ctcctaaatt gaaaaatgca tatctataaa
     8821 tagcaaactt gtccacacaa gccatccatc atatttcaca aaacaaaaaa gacatttagc
     8881 tatgtatatt gcacaagcca aatgcccttc caatctcaat gccttatcat ttctattatc
     8941 aaaaattacg agccattcaa agacaaataa aaaaggtaaa tactcaaaat ttgagcactt
     9001 accttcatta tatatagaat ttaatataaa tattgatggc ggaggaagag ggattcgaac
     9061 ccccgcgagc cgttaagccc ctgtcggttt tcaagaccga tcccttcagc cggacttggg
     9121 tattcctcct aaacataata tttatcatat atgaacgttc tgtaaaagtc aatattgttt
     9181 ttaagcatta catgattacc acaaatcatt gtcttccact acagttgacc tataaacgaa
     9241 tgtaaaaaat cactacttat aattaatcta tttgttgtct tacaaacctt tgtttttagg
     9301 ttacaaagat ggcatgtgac gttgatagat actagatttt ttcaaactcg attcagcatg
     9361 tcacaacgtc aacgtaacca ccatttccat acaaagatta tacacaaact ttactagcta
     9421 aatactgatc tactgctttc gctacgcctc taccttcttt aattgcccat acaactaaac
     9481 tttgaccacg tctagcatct ccagcagcaa ataccttttc attattagtt tgatagtttg
     9541 tatcatccgc cacgattcga tttctatccg ttttaatgtt aaaagcattc ggtactgttg
     9601 gttctgtacc ttcgaagccg attgataata atacaaggtc agcaggccaa aatctttcag
     9661 gtccttcttt catgaccata ccattttcgc cttgctctaa aatttgagta tacaaaccac
     9721 gtatgtgtcc tttatcgtca acatcgtaac gcattgtttg aacaccatat gcacgtggtt
     9781 ccttaccaaa cttagcttcg tactcttggt gcgcatagtc cattttaaac accggcattg
     9841 ctaaaggcca tgatgcattt tctgtaaatg taattgcttc tggcaatttc gtatatttat
     9901 taaattgaac aatcgattta caattttctc ttaatgctgt cgctacacag tctgcccctg
     9961 tatcaccagc accaatgata atgacattct tatcttttgc agttattgtt atatcatcaa
    10021 tttctccatt taacaactgc gtttgttcag ttaaataatc catagcgaaa tgtataccat
    10081 cacccatgcg tccttctaaa ggtaaatctc tacctttttg tgcaccagta cataatataa
    10141 tggcatcata ctcagattct aacgttgctt tatcaatatc aacgccgact tcaacaccat
    10201 taatgaaagt aatgcccgct tcttccatta acttaatacg acgtcgaacc acatctttat
    10261 caagtttcat attcggaata ccatacatta ataaaccgcc tgattctcta gcacgttcat
    10321 aaatagttac ttgatatcct agtagattaa gttcttcagc agcagctaat cctgctggac
    10381 cgcttccaac gattgccact ttttcatctc tacggcgact cggaactttc ggcgctaccc
    10441 aaccattttc aaaagcttca tcaataattg tgcgttcaat acctttaatc gcaatcgatt
    10501 ctctattaat cttcatcaca caagcacttt cgcatggtgc aggacataca cgccctgtaa
    10561 agtcaggaaa gttatttgtt tcgcttaagc gttcataagc agttttaaaa tcttgatgat
    10621 acactaagtc gttccattca ggaatgtagt ttccaattgg acaacctatt gtttccctac
    10681 catactgttg tccggtttga caaaacggcg ttccacaatc catacatcgt gcaccttgga
    10741 tagaggcatc ttctttagta aatcgttgtt gatatgcttt atgatgcttc aaacggtcta
    10801 ccagtgataa ttcacctaag tactgtttgt catacttcat aaatccttta aattcaccca
    10861 tcgtatctcc ccctttcctt aatacacaac ggctggttta tgtttagcat cgattgtttt
    10921 actgtcatcg taaaatgcag ctaacatcgc ttcatcttca ttgtcatgta atgatttgtg
    10981 caaatgaatt ttttgcatca ttaattgata atctttagga ataactttaa cgacgacatc
    11041 ttcaatgcga tcaaaatgtt ttaacacatg aatcgctctc gtactattcg tgtgtgacac
    11101 atgttcttcc agcatttgct taatgaatgc tttttcttct tggtgtttaa tctttgtaaa
    11161 cgaaagcgta tctagttgat tattttcaac aaaagcttct acatcagacg ggataacgta
    11221 agcaatacca ccactcatac cttgaccgaa gttcttacct acatcaccta aattaatgac
    11281 atgtccacca gtcatatact ctaatccatg gtcgccgata ccttcaacga caacatctac
    11341 accactattt ctaatacaga atctttctcc tgcactaccg ttaataaatg ccttaccact
    11401 tgtcgcacca tagaatgaga cgttaccagc aataatttca ttttgtcgtt cttcaaaagg
    11461 tgctttgaca atgaccgtac caccagataa tcctttacca acatagtcat tcgcatctcc
    11521 agtatgatga atcattaagc ctttcggtgc atatgctgca agactttgac cagcatgacc
    11581 attcgtataa acattaattg tattttcagg aagtcctgct tctccatatt gtttcgaaat
    11641 ctcactacct gtaataaccc ctacatcacg ttgttcatta tttactgtaa agctacctgt
    11701 atagcgacgc ccttcagcaa tatatggctt cgttacttca tataaatttg ttaaatcaaa
    11761 tccatgctca agattatgat tttgttgaat ttcttttgtg tttggcccat cgaaaggaca
    11821 taacagtttt tcaacatcaa tactagccgc tttgctattc gcttttaatg ttgatgatcg
    11881 ttgtaataaa tcagttcttc caactaagtc ttctacacgt ttcaaaccta aagatgctaa
    11941 aatttctctt aattcttgtg caataaaatg cataaaatta acaacatgat gtgctttacc
    12001 tctatataaa gcacgtaaat ctttgttttg agttgcaact cctactggac atgtatcttt
    12061 atggcataca cgcatcataa tacagcccaa caccactaat ggtgcagttg caaatccaaa
    12121 ttcttccgct ccaagcgcac atgcgtacgc tacatcttta ccagttaata acttaccgtc
    12181 tgtttctaac ttaacacgac ttcttaagtc atttagtttt aatgtttgat gtgtttctgc
    12241 taaaccaatc tcccaaggaa caccggcatg ctgaatactc gttttgggtg aagcccctgt
    12301 accaccatcg taaccactga tgacaatttt atctgcaaat gcttttgcca ccccagatgc
    12361 aatggtacca acacctgttt tcgaaactaa ttttaccgcg atatctgcat ctttattcgc
    12421 atttttcaaa tcatgtatca gttgcgctaa atcttctatt gaataaatat catgatgtgg
    12481 cggtggtgaa atcagaccga tacctggcgt tgaccctctt gtcttcgcaa tccacggata
    12541 taccttagta ccaggtaatt gaccaccttc accaggcttt gcaccttgcg caactttaat
    12601 ttgaatttct ttggcatgtt gtaaataatc actagttaca ccaaaacgcc cagaagcaac
    12661 ttgtttaatc gcacttactt tgttgcttcc atcaacttgt acttcataac gttttgcatc
    12721 ttcgccacct tcaccactat tactctttcc acctaattgg ttcatggctt gtgctaacgt
    12781 ttcatgtgct tccgctgaaa tcgatccata actcatcgcc cctgtattaa agcgtttgac
    12841 aatgtcactt accggttcaa cttggtcgat gtcaatcggt gtacatgctt taaattcaag
    12901 taaatgtcta atgtgatctg ttctattttt gttcaccgct tcagagtatg ctttaaattg
    12961 cgcatagtca ttttctttac atgcgtgctg caataagaaa atagattccg gattaaaagc
    13021 atgatgttga ccttgttgtc tccattggaa tgtactacct gatgcaagat aattatcatc
    13081 actttgttga cgtgctttat tttcagcatc aatttgatca atcgaaatac cagataactt
    13141 agactgtgtc ccagtaaaat aacgatcaat cacatcatga gacaagccaa tcgcttcaaa
    13201 tatttgtgcc ccttgataac tttgcactgt cgaaattccc atcttagcca ttactttaat
    13261 gacaccttct gacaatacat ccgtatatgt cttaacatta tcgacaacgg tgccttgtaa
    13321 cccttctgtc aatgtcagtt gttcaactgt acgttgcgct aggtatggca caattgcatt
    13381 cgcgccatat gcgagtaaac aagcaacatg atgcacttct cgtgtctcac cagatttagc
    13441 gactaaactt gtagacatac gtaaatctgc tttaataagt aattgatgca catgacttat
    13501 tgcgagtaac atcggcattg caaagccatt gctatcaact aatccactat catctaacac
    13561 tagaatttga gcgccttgct ttacagcatt cactgcttct cggcctaatg cttctaacgc
    13621 atcttccaaa tccccttcat ataccgttga taaataagtt aatttaaaat gttcctgatc
    13681 aatcgctgct aagtgtgatt cattcaatac cggccttttc aattgaatac gatctaaaac
    13741 cgtttcgtca ggtgctagta agttaccttc gccacctaaa taagaaagtt cactcgttac
    13801 gattttttca cgatacgcat caattggtgg attcgtaact tgtgcaaaca gctgtttaaa
    13861 gtaattaaat agtgattctg gtcgctcgtt caacactgca attggcgcat catatcccat
    13921 tgcaccgata ggatccttct taccttctac aagttcctga atatacttat gaatctcttc
    13981 tttcgtgtat gcaaactgac gttgtaattt aaataacgtc tcatctttcc attgcgaatc
    14041 ttgatattgt atattttcaa aatcaaagtc aactttatgg ttatcaatcc acgctttata
    14101 tggtaattct ccagcaatcg caccttttaa atcattattt tcaatgactt tattctgttt
    14161 aaaatcaaca agcaataact ttccaggatt caattgacct ttaaaagcaa cattactttc
    14221 aggtacgtcc acaacaccca cttcagatga aaagacaata aagttatctt tagtaatcgt
    14281 ataacgacct ggacgtaatc catttctatc tgtaagcgcg ccaagtttgt caccgttaca
    14341 gaacgaaatc attgtaggac catcccacgg ttccattaaa taactataaa attcataaaa
    14401 cgcacgtaca tttgcatcat tcgcttcatt atataaccaa ggttcaggta tgagtaacat
    14461 cgctgccttt tctggctcca tggctaacga taagaactct agcgcattat ctacaatggc
    14521 agagtcacta ccatcctcat cgacaatttg aaacacttta tgttgatcct cgccaaataa
    14581 tgtttcgatt aatttatgtt ggcgtgctcg catccagttt acattacctt taatcgtgtt
    14641 aatctcacca ttatgcatta acatacggtt aggatgtgcc cttttccaac tcgggaatgt
    14701 attcgtacta aatctcgaat gcactaaccc tagctttgat tgatataaat catccgataa
    14761 atctgtatat agttttttaa tttggtctga tcgtaaccaa cctttatata caattgtttt
    14821 gcgtgataag ctcgtaaaat acaattctaa atcgcactga gtcgaataga actctaattg
    14881 ttttctcgct aaaaacaaac gcttttcaac atcttcaatg tccctaatat caataaacac
    14941 ttgttgaatg actggcatcg tatctgctac atgtttagca atggcatctt tattaactgg
    15001 tacattacga taaccaagaa ttgataaccc ttcgccttca aaatattttt taaaaactac
    15061 ttcatgttca gaacctaaaa tgcgttcttt ggaaaaaaat aaccccacgg catattcacc
    15121 ttcacctggg atatcaaagt ccgttacatg ttgtttgaaa aatgcaaaag gtatttcagt
    15181 cataatacct gcgccatcac cagtgatgcc atctgcgccg accccgcccc tgtgatctaa
    15241 gcgtcgcaac atttcaagcg atttatcaat gatgtcgtga gaccttttat tatccatatt
    15301 cgcataaaaa ccaataccac acgcatcatg ttcctcacga tagtcatata agcctttaat
    15361 taatttctca ttgtgcatga tgcacacccc tttttttaga atattctgat attagttatt
    15421 aatgataatt actataatct aaaaaattta tctgttcaat atataaaata gaagatattc
    15481 atctaaaaaa tagaacattt atcaataata ttgctataat agttacaaaa cactcatttt
    15541 tggaggtgcc tatatcgcta tggaaattaa acaattaaga tattttatcg aggtcgctaa
    15601 aagagaacat atctccgaaa cagcacttga actaaacatt gctcaatcag cgataagccg
    15661 tcaaattaca ttattagaac aagaacttaa tgtgtcttta tttaaaaagc aaggacgcaa
    15721 tattacgctc acatctgaag ggaaattatt atttaatgaa gctctgcgta ttattgaaca
    15781 tttagatagc acgattgaac aatttcaaag ccatggatta actaaaaata aaagtatcta
    15841 cattggctat gatgagagtg acgtatccca catgttacta ccacttatcc aaacgtttca
    15901 tttacaaaat gatacacatg tcataccgag cttattagaa catgacacaa ttataaatag
    15961 cgtattaaat gggaatatag acattggttt cacggaactt acaccagaaa tacgtaaaca
    16021 caaacaatta catatgctac ctttattcga agagcactat catttatatg cgccttcaga
    16081 cgatccaatt acgatggcga cacacccacc attaattcag tttgagcata gtcatattta
    16141 ttgcttggca ccatttgccg aaactgtaaa aaaacaattg cgcaagatta ctaaatcaga
    16201 tgtatacaca atcagtagcc aaccacttgc gcagtatctc cttcgtcaaa aagaaggtta
    16261 catcatttca tcacaaaata tacatttacc agaatctaaa tcatggatag atataaaatt
    16321 agatcatact gaattaaaaa gaacgatatg tgctattaca aaggagcctt atacaaagag
    16381 tgatattggc atattattaa cacttattca gcaattaatg actaaaacgt ctacattcca
    16441 ttaagtaatt cgatgctatc aatgatgatt ttcgttttac acttagcagt aatatctttg
    16501 aaaataaaaa attaagggcg tataa
//
LOCUS       DALPQQ010000053        16226 bp    DNA     linear   BCT 22-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus strain K18-6-464
            SAMD00233528-rid16434743.denovo.053, whole genome shotgun sequence.
ACCESSION   DALPQQ010000053 DALPQQ010000000
VERSION     DALPQQ010000053.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMD00233528
            Sequence Read Archive: DRR236061
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 16226)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 16226)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001543423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001543423.1
            Genome Coverage       :: 77x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/22/2022 17:09:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,811
            CDSs (total)                      :: 2,743
            Genes (coding)                    :: 2,689
            CDSs (with protein)               :: 2,689
            Genes (RNA)                       :: 68
            rRNAs                             :: 2, 4, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 4, 2 (16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 54
            CDSs (without protein)            :: 54
            Pseudo Genes (ambiguous residues) :: 0 of 54
            Pseudo Genes (frameshifted)       :: 27 of 54
            Pseudo Genes (incomplete)         :: 27 of 54
            Pseudo Genes (internal stop)      :: 10 of 54
            Pseudo Genes (multiple problems)  :: 10 of 54
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..16226
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMD00233528-rid16434743.denovo.053"
                     /strain="K18-6-464"
                     /db_xref="taxon:1280"
                     /geo_loc_name="Japan: Niigata"
     gene            66..6626
                     /gene="sasC"
                     /locus_tag="O7798_001413"
     CDS             66..6626
                     /gene="sasC"
                     /locus_tag="O7798_001413"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500376.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LPXTG-anchored repetitive surface protein SasC"
                     /protein_id="HDC2863677.1"
                     /translation="MNLLKKNKYSIRKYKVGIFSTLIGTVLLLSNPNGAQALTTDNNV
                     QSDTNQATPVNSQDKDVANNRGLANSAQNTPNQSATTNQATNQALVNHNNGSIVNQAT
                     PTSVQSSTPSAQNNNHTDGNTTATETVSNANNNDVVSNNTALNVPTKTNENGSGGHLT
                     LKEIQEDVRHSSNKPELVAIAEPASNRPKKRSRRAAPADPNATPADPAAAAVGNGGAP
                     VAITAPYTPTTDPNANNAGQNAPNEVLSFDDNGIRPSTNRSVPTVNVVNNLPGFTLIN
                     GGKVGVFSHAMVRTSMFDSGDNKNYQAQGNVIALGRIHGTDTNDHGDFNGIEKALTVN
                     PNSELIFEFNTMTTKNGQGATNVIIKNADTNDTIAEKTVEGGPTLRLFKVPDNVRNLK
                     IQFVPKNDAITDARGIYQLKDGYKYYSFVDSIGLHSGSHVFVERRTMDPTATNNKEFT
                     VTTSLKNNGNSGASLDTNDFVYQVQLPEGVEYVNNSLTKDFPSNNSGVDVNDMNVTYD
                     AANRVITIKSTGGGTANSPARLMPDKILDLRYKLRVNNVPTPRTVTFNETLTYKTYTQ
                     DFINSAAESHTVSTNPYTIDIIMNKDALQAEVDRRIQQADYTFASLDIFNGLKRRAQT
                     ILDENRNNVPLNKRVSQAYIDSLTNQMQHTLIRSVDAENAVNKKVDQMEDLVNQNDEL
                     TDEEKQAAIQVIEEHKNEIIGNIGDQTTDDGVTRIKDQGIQTLSGDTATPVVKPNAKK
                     AIRDKATKQREIINATPDATEDEIQDALNQLATDETDAIDNVTNATTNADVETAKNNG
                     INTIGAVVPQVTHKKAARDAINQATATKRQQINSNREATQEEKNAALNELTQATNHAL
                     EQINQATTNADVDNAKGDGLNAINPIAPVTVVKQAARDAVSHDAQQHIAEINANPDAT
                     QEERQAAIDKVNAAVTAANTNILNANTNADVEQVKTNAIQGIQAITPATKVKTDAKNA
                     IDKSAETQHNTIFNNNDATLEEQQAAQQLLDQAVATAKQNINAADTNQEVAQAKDQGT
                     QNIVVIQPATQVKTDARNVVNDKAREAITNINATTGATREEKQEAINRVNTLKNRALT
                     DIGVTSTTAMVNSIRDDAVNQIGAVQPHVTKKQTATGVLNDLATAKKQEINQNTNATT
                     EEKQVALNQVDQELATAINNINQADTNAEVDQAQQLGTKAINAIQPNIVKKPAALAQI
                     NQHYNAKLAEINATPDATNDEKNAAINTLNQDRQQAIESIKQANTNAEVDQAATVAEN
                     NIDAVQVDVVKKQAARDKITAEVAKRIEAVKQTPNATDEEKQAAVNQINQLKDQAINQ
                     INQNQTNDQVDTTTNQAVNAIDNVEAEVVIKPKAIADIEKAVKEKQQQIDNSLDSTDN
                     EKEVASQALAKEKEKALAAIDQAQTNSQVNQAATNGVSAIKIIQPETKVKPAAREKIN
                     QKANELRAKINQDKEATAEERQVALDKINEFVNQAMTDITNNRTNQQVDDTTSQALDS
                     IALVTPDHIVRAAARDAVKQQYEAKKREIEQAEHATDEEKQVALNQLANNEKRALQNI
                     DQAIANNDVKRVETNGIATLKGVQPHIVIKPEAQQAIKASAENQVESIKDTPHATVDE
                     LDEANQLISDTLKQAQQEIENTNQDAAVTDVRNQTIKAIEQIKPKVRRKRAALDSIEE
                     NNKNQLDAIRNTLDTTQDERDVAIDTLNKIVNTIKNDIAQNKTNAEVDRTETDGNDNI
                     KVILPKVQVKPAARQSVGVKAEAQNALIDQSDLSTEEERLAAKHLVEQALNQAIDQIN
                     HADKTAQVNQDSINAQNIISKIKPATTVKATALQQIQNIATNKINLIKANNEATDEEQ
                     NIAIAQVEKELIKAKQQIASAVTNADVAYLLHDEKNEIREIEPVINRKASAREQLTTL
                     FNDKKQAIEANIQATVEERNSILAQLQNIYDTAIGQIDQDRSNAQVDKTASLNLQTIH
                     DLDVHPIKKPDAEKTINDDLARVTALVQNYRKVSNRNKADALKAITALKLQMDEELKT
                     ARTNADVDAVLKRFNVALSDIEAVITEKENSLLRIDNIAQQTYAKFKAIATPEQLAKV
                     KVLIDQYVADGNRMIDEDATLNDIKQHTQFIVDEILAIKLPAEATKVSPKEIQPAPKV
                     CTPIKKEETHESRKVEKELPNTGSEGMDLPLKEFALITGAALLARRRTKNEKES"
     gene            complement(6743..8011)
                     /locus_tag="O7798_001414"
     CDS             complement(6743..8011)
                     /locus_tag="O7798_001414"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500375.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)/FAD-dependent oxidoreductase"
                     /protein_id="HDC2863678.1"
                     /translation="MYQTIIIGGGPSGLMAAVAASEQSSSVLLIEKKKGLGRKLKISG
                     GGRCNVTNRLPYAEIIKNIPGNGKFLYSPFSIFDNESIIDFFESRGVKLKEEDHGRMF
                     PVSNKAQDVVDTLVTTIERQHVTIKEEEAVSRIEVNTDQTFTVHTQNNSYESHSLVIA
                     TGGTSVPQTGSTGDGYKFAQDLGHTITELFPTEVPITSAEPFIKSNRLKGLSLKDVEL
                     SVLKKNGKKRISHQMDMLFTHFGISGPAALRCSQFVYKEQKNQKTQHISMAIDAFPEL
                     NHEQLKQHITSLLSDTPDKIIKNSLHGLIEERYLLFMLEQAGIDENTTSHHLSNQQLN
                     DLVNMFKGFVFKVNGTLPIDKAFVTGGGVSLKEIQPKTMMSKLVPGLFLCGEVLDIHG
                     YTGGYNITSALVTGHVAGLYAGHYSHASME"
     gene            8418..10079
                     /locus_tag="O7798_001415"
     CDS             8418..10079
                     /locus_tag="O7798_001415"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500374.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polysaccharide biosynthesis protein"
                     /protein_id="HDC2863679.1"
                     /translation="MSESKEMVRGTFLITISILITKVLGVLFIIPFNYLIGGQENMAP
                     FTYAYAPYNIAIAVATAGVPLAASKYVAKYNAIGAYKVSQKFYKSSFIVMSITGVLGF
                     LVLYFLAPYISELTLARNIHDKNGWSVDDITWIIRIISMVVIFIPVLATWRGIFQGYK
                     SMGPTAVSEVTEQIARVIFILIGSYLVLNVFDGSILLANGIATFAAAVGAIIGIFTLW
                     YYWRKRKHNIDRMVESDYTDIDVSYGKMYKEIIAYSIPFVIVSLNYPLFNLVDQFTHN
                     GALSLVGIPSQLQDIFFNMLNMSTNKIVMIPTSLSAGFAVSLIPYITKTFAEGRLHEM
                     HHQIRTSIGVLMFITVPASIGIMALAQPLFTVFYGYDPIVLGHDPNHDGSRLLFYYAP
                     VAILISLLSVTASMLQGIDKQKLTVYVILASVVIKLALNYPLIMLFHTPGAILSTSIA
                     LLFAIGCNFYILKKYAKFKFSYSWIHFAKIFLYSFIMMLGVELVFFLANLFLEPTKLG
                     YLIIIILGVTVGILIYGTITIKTRLADEFLGEIPEKLRRRVRFLR"
     gene            10076..10771
                     /locus_tag="O7798_001416"
     CDS             10076..10771
                     /locus_tag="O7798_001416"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500373.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rRNA pseudouridine synthase"
                     /protein_id="HDC2863680.1"
                     /translation="MRIDKFLANMGVGTRNEVKQLLKKGLVNVNEQVIKSPKTHIEPE
                     NDKITVRGELIEYIENVYIMLNKPKGYISATEDHHSKTVIDLIPEYQHLNIFPVGRLD
                     KDTEGLLLITNDGDFNHELMSPNKHVSKKYEVISANPITEDDIQAFKEGVTLTDGKVK
                     PAILTYIDNQTSHVTIYEGKYHQVKRMFHSIQNEVLHLRRIKIADLELDSNLDSGEYR
                     LLTENDFDKLNYK"
     gene            10788..11210
                     /locus_tag="O7798_001417"
     CDS             10788..11210
                     /locus_tag="O7798_001417"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500372.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YtxH domain-containing protein"
                     /protein_id="HDC2863681.1"
                     /translation="MAKGNLFKAILGIGGAVAAVLVTRKDSRDKLKAEYNKYKQDPQS
                     YKDNAKDKATQLGTIANETIKEVKTNPKEYANRLKNNPKAFFKEEKSKFTEYDNKNDE
                     SIEKGKFDDEGGAAPNNNLRIVTEEDLKKNKNALSDKE"
     gene            12016..13425
                     /gene="sapep"
                     /locus_tag="O7798_001418"
     CDS             12016..13425
                     /gene="sapep"
                     /locus_tag="O7798_001418"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500371.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Mn(2+)-dependent dipeptidase Sapep"
                     /protein_id="HDC2863682.1"
                     /translation="MWKEKVQQYEDQIINDLKGLLAIESVRDDAKASEDAPVGPGPRK
                     ALDYMYEIAHRDGFTTHDVDHIAGRIEAGKGNDVLGILCHVDVVPAGDGWDSNPFEPV
                     VTEDAIIARGTLDDKGPTIAAYYAIKILEDMNVDWKKRIHMIIGTDEESDWKCTDRYF
                     KTEEMPTLGFAPDAEFPCIHGEKGITTFDLVQNKLTEDQDEPDYELITFKSGERYNMV
                     PDHAEARVLVKENMTDVIQDFEYFLEQNHLQGDSTVDSGILVLTVEGKAVHGMDPSIG
                     VNAGLYLLKFLASLNLDNNAQAFVAFSNRYLFNSDFGEKMGMKFHTDVMGDVTTNIGV
                     ITYDNENAGLFGINLRYPEGFEFEKAMDRFANEIQQYGFEVKLGKVQPPHYVDKNDPF
                     VQKLVTAYRNQTNDMTEPYTIGGGTYARNLDKGVAFGAMFSDSEDLMHQKNEYITKKQ
                     LFNATSIYLEAIYSLCVEE"
     gene            13429..14277
                     /gene="dat"
                     /locus_tag="O7798_001419"
     CDS             13429..14277
                     /gene="dat"
                     /locus_tag="O7798_001419"
                     /EC_number="2.6.1.21"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500370.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-amino-acid transaminase"
                     /protein_id="HDC2863683.1"
                     /translation="MEKIFLNGEFVSPSEAKVSYNDRGYVFGDGIYEYIRVYNGKLFT
                     VTEHYERFLRSANEIGLDLNYSVEELIELSRKLVDMNQIETGAIYIQATRGVAERNHS
                     FPTPEVEPAIVAYTKSYDRPYDHLENGVNGVTVEDIRWLRCDIKSLNLLGNVLAKEYA
                     VKYNAVEAIQHRGETVTEGSSSNAYAIKDGVIYTHPINNYILNGITRIVIKKIAEDYN
                     IPFKEETFTVDFLKNADEVIVSSTSAEVTPVIKLDGEPVNDGKVGPITRQLQEGFEKY
                     IESHSI"
     gene            14827..15618
                     /locus_tag="O7798_001420"
     CDS             14827..15618
                     /locus_tag="O7798_001420"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001602611.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphotransferase family protein"
                     /protein_id="HDC2863684.1"
                     /translation="MEQFYQLGWTLDSAGGASGEAYMAEQDGQKLFLKRNSNPFIAAL
                     SAEGIVPKLVWTKRIETGEVVTAQHWKNGRELSSNEMKQTRVAHLLKKIHNSRPLLSM
                     LKRMEMEPITPEIMLNKINASLSREVLTHHIVRKSLTYLEEHIPSLDSRFFTVVHGDV
                     NHNNWLLSDRDELFLVDWEGAMIADPAIDIGMLLYNYVPQQQWSEWLETYGVQESLNL
                     NKRMKWYTVIQSIGLVQWYEEQKRYKDMNTWLKFLNEVMNSNMFI"
     gene            15633..>16226
                     /gene="trmB"
                     /locus_tag="O7798_001421"
     CDS             15633..>16226
                     /gene="trmB"
                     /locus_tag="O7798_001421"
                     /EC_number="2.1.1.33"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500368.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA (guanosine(46)-N7)-methyltransferase TrmB"
                     /protein_id="HDC2863685.1"
                     /translation="MRVRYKPWAEDYLKDHPELVDMDGQHAGKMTEWFDKTQPIHIEI
                     GSGMGQFITTLAAQNPHINYISMEREKSIVYKVLDKVKEMGLTNLKIICNDAIELNEY
                     FKDGEVSRIYLNFSDPWPKNRHAKRRLTYHTFLALYQQILNDEGDLHFKTDNRGLFAY
                     SLESMSQFGMYFTKINLNLHQEDDGSNILTEYEKKFSD"
BASE COUNT         6059 a         2488 c         2965 g         4714 t
ORIGIN      
        1 agcgtatatt tttagcataa ttcttaacaa cacagcagag aacagacaac caggaggaaa
       61 atgaaatgaa tttgttaaag aaaaataaat atagtattag gaagtataaa gtaggcatat
      121 tctctacttt aatcggaaca gttttattac tttcaaaccc aaatggtgca caagccttaa
      181 ctacggataa taatgtacaa agcgatacta atcaagcaac acctgtaaat tcacaagata
      241 aagatgttgc taataataga ggtttagcaa atagtgcgca gaatacacct aatcaatctg
      301 caacaaccaa tcaagcaacg aatcaagcat tggttaatca taataatggt agtatagtaa
      361 atcaagctac gccaacatca gtgcaatcaa gtacgccttc agcacaaaac aataatcata
      421 cagatggcaa tacaacagca actgagacag tgtcaaacgc taataataat gatgtagtgt
      481 cgaataatac cgcattaaat gtaccaacta aaacaaatga aaatggttca ggaggacatc
      541 taactttaaa ggaaattcaa gaagatgttc gtcattcttc aaataaacca gagctagttg
      601 caattgctga accagcatct aatagaccga aaaagagaag tagacgtgcg gcaccggcag
      661 atcctaatgc aactccagca gatccagcgg ctgcagcggt aggaaacggt ggtgcaccag
      721 ttgcaattac agcgccatat acgccaacaa ctgatcctaa tgccaataat gcaggacaaa
      781 atgcacctaa cgaagtgctg tcatttgatg acaatggtat tagaccaagt accaaccgtt
      841 ctgtgccaac agtaaacgtt gttaataact tgccgggctt cacactaatc aatggtggca
      901 aagtaggggt gtttagtcat gcaatggtaa gaacgagcat gtttgattca ggagataata
      961 agaactatca agcacaagga aatgtaattg cattaggtcg tatacatgga actgatacga
     1021 atgaccatgg cgattttaat ggtatcgaga aagcattaac agtaaatccg aattctgaat
     1081 taatctttga atttaataca atgactacta aaaacggtca aggcgcaaca aatgttatta
     1141 tcaaaaatgc tgatactaat gatacgattg ctgaaaagac tgttgaaggc ggtccaactt
     1201 tgcgtttatt taaagtacct gataatgtga gaaatctcaa aattcaattt gtacctaaaa
     1261 atgacgcaat aacagatgcg cgtggcattt atcaactaaa agatggttac aaatactata
     1321 gctttgttga ctctatcgga cttcattctg ggtcacatgt ttttgttgaa agacgaacaa
     1381 tggatccaac agcaacaaat aataaagagt ttactgtaac aacatcatta aagaataatg
     1441 gtaattctgg tgcttctcta gatacaaatg actttgtata tcaagttcaa ttacctgaag
     1501 gtgttgaata tgtgaacaat tcattgacta aagattttcc aagtaacaat tcaggcgttg
     1561 atgttaatga tatgaatgtt acatatgatg cagcaaatcg tgtgataaca attaaaagta
     1621 ctggaggagg tacagcaaac tctccggcac gacttatgcc tgataaaata ctcgatttaa
     1681 gatataaatt acgtgtaaat aatgtgccga caccaagaac agtaacattt aacgagacat
     1741 taacgtataa aacatataca caagatttca ttaattcagc tgcagaaagt catactgtaa
     1801 gtacaaatcc atatactatc gatatcatca tgaataaaga tgcattacaa gccgaagttg
     1861 acagacgtat tcaacaagct gattatacat ttgcgtcatt agatatcttt aatggtctga
     1921 aacgacgcgc acaaacgatt ttagatgaaa atcgtaacaa tgtaccatta aataaaagag
     1981 tttctcaagc atatattgat tcattaacta atcaaatgca acatacgtta attcgaagtg
     2041 ttgatgctga aaatgcagtt aataaaaaag ttgaccaaat ggaagattta gttaatcaaa
     2101 atgatgaatt gacagatgaa gaaaaacaag cagcaataca agttatcgag gaacataaaa
     2161 atgaaataat tggtaatatt ggtgaccaaa cgactgatga tggcgttact agaatcaaag
     2221 atcaaggtat acagacctta agtggggata ctgcaacacc ggttgttaaa ccaaatgcta
     2281 aaaaagcaat acgtgataaa gcaacgaaac aaagggaaat tatcaatgca acaccagatg
     2341 ctactgaaga cgagattcaa gatgcactaa atcaattagc tacggatgaa acagatgcta
     2401 ttgataatgt tacgaatgct actacaaatg ctgacgttga aacagctaaa aataatggca
     2461 tcaatactat tggagcagtt gttcctcaag taactcataa aaaagctgca agagatgcaa
     2521 ttaaccaagc aacagcaacg aaaagacaac aaataaatag taatagagaa gcaactcagg
     2581 aagagaaaaa tgcagcattg aacgaattaa ctcaagcaac caaccatgct ttagaacaaa
     2641 tcaatcaagc aacaacaaat gctgatgttg ataacgccaa aggagatggt ctaaatgcca
     2701 ttaatccaat tgctcctgta actgttgtta agcaagctgc aagggatgcc gtatcacatg
     2761 atgcacaaca acatatcgca gagatcaatg ctaatcctga tgcgactcaa gaagaaagac
     2821 aagcagcaat tgacaaagtg aatgctgctg taactgcagc aaacacaaac attttaaacg
     2881 ctaataccaa tgctgatgtt gaacaagtaa agacaaatgc gattcaagga atacaagcaa
     2941 ttacaccagc tacaaaagta aaaacagatg caaaaaatgc catcgataaa agtgcggaaa
     3001 cgcaacataa tacgatattt aataataatg atgcgacgct cgaagaacaa caagcagcac
     3061 aacaattact tgatcaagct gtagccacag cgaagcaaaa tattaatgca gcagatacga
     3121 atcaagaagt tgcacaagca aaagatcagg gcacacaaaa tatagtagtg attcaaccgg
     3181 caacacaagt taaaacggat gctcgcaatg ttgtaaatga taaagcgcga gaggcgataa
     3241 caaatatcaa tgctacaact ggcgcgactc gagaagagaa acaagaagcg ataaatcgtg
     3301 tcaatacact taaaaataga gcattaactg atattggtgt gacgtctact actgcgatgg
     3361 tcaatagtat tagagacgat gcagtcaatc aaatcggcgc agttcaaccg catgtaacga
     3421 agaaacaaac tgctacaggt gtattaaatg atttagcaac tgctaaaaag caagaaatta
     3481 atcaaaacac aaatgcaaca actgaagaaa agcaagtggc tttaaatcaa gtggatcaag
     3541 agttagcaac ggcaattaat aatataaatc aagctgatac aaatgcggaa gtagatcaag
     3601 cgcaacaatt aggtacaaaa gcaattaatg cgattcagcc aaatattgtt aaaaaacctg
     3661 cagcattagc acaaatcaat cagcattata atgctaaatt agctgaaatc aatgctacac
     3721 cagatgcaac gaatgatgag aaaaatgctg cgatcaatac tttaaatcaa gacagacaac
     3781 aagctattga aagtattaaa caagctaaca caaatgcaga agtagaccaa gctgcgacag
     3841 tagcagagaa taatatcgat gctgttcaag ttgatgtagt aaaaaaacaa gcagcgcgag
     3901 ataaaatcac tgctgaagtg gcgaagcgta ttgaagcggt taaacaaaca cctaatgcaa
     3961 ctgacgaaga aaagcaggct gctgttaatc aaatcaatca acttaaagat caagcaatta
     4021 atcaaattaa tcaaaaccaa acaaatgatc aggtagacac aactacaaat caagcggtaa
     4081 atgctataga taatgttgaa gctgaagtag taattaaacc aaaggcaatt gcagatattg
     4141 aaaaagctgt taaagaaaag caacagcaaa ttgataatag tcttgattca acagataatg
     4201 agaaagaagt tgcttcacaa gcattagcta aagaaaaaga aaaagcactt gcagctattg
     4261 accaagctca aacgaatagt caggtgaatc aagcagcaac aaatggtgta tcagcgatta
     4321 aaattattca acctgaaaca aaagttaaac cagctgcacg tgaaaaaatc aatcaaaaag
     4381 cgaatgaatt acgtgctaag attaatcagg ataaagaagc aacagcagaa gaaagacaag
     4441 tagcactaga taaaatcaat gaatttgtaa atcaagccat gacagatatt acgaataata
     4501 gaacaaatca acaagttgat gatacaacaa gtcaagcgct tgatagcatt gctttagtga
     4561 cgcctgacca tattgttaga gcagctgcta gagatgcagt taagcaacaa tatgaagcta
     4621 aaaagcgcga aattgagcaa gcggaacatg cgactgatga agaaaaacaa gttgctttaa
     4681 atcaattagc gaataatgaa aaacgtgcat tacaaaacat cgatcaagca atagcgaata
     4741 atgatgtgaa acgtgttgaa acaaatggca ttgctacact aaaaggtgta caacctcata
     4801 ttgtaattaa gcctgaagca caacaagcaa taaaagcaag tgcagaaaat caagtagaat
     4861 caataaaaga tacaccacat gcaacagttg atgaattaga tgaagcgaat caattaatta
     4921 gcgacacact caaacaagcg caacaagaaa tagaaaatac aaatcaagat gctgctgtta
     4981 ctgatgttag aaatcaaaca atcaaggcaa tagagcaaat aaaacctaaa gtaagacgta
     5041 aacgagctgc gcttgatagc attgaagaaa ataataaaaa tcaactcgat gcaatccgaa
     5101 atacgttgga tactactcaa gatgaaagag atgttgctat tgatacttta aataaaattg
     5161 taaatacaat taaaaatgac attgcacaaa acaaaacgaa tgcagaagtg gatcgaactg
     5221 agactgatgg caacgacaac atcaaagtga ttttacctaa agttcaagtt aaaccagcag
     5281 cgcgtcaatc tgttggtgta aaagccgaag ctcaaaatgc actaatcgat caaagcgatt
     5341 tatcaactga agaagaaaga ctagctgcta aacatttagt agaacaagca cttaatcagg
     5401 ctattgatca gatcaatcat gcagataaga ctgcccaagt taatcaagat agtataaatg
     5461 ctcaaaatat tatttcaaaa attaaaccag cgacaacagt taaagcaaca gcattacaac
     5521 aaattcaaaa tatcgctaca aataaaatta atttaattaa agcaaataac gaagcaacag
     5581 atgaagaaca aaatattgca atagcacaag ttgaaaaaga gttaattaaa gctaaacaac
     5641 aaattgctag tgcagtgact aatgcagatg tggcatattt attgcatgat gagaaaaacg
     5701 aaattcgtga aatcgaacct gttattaaca gaaaggcgtc tgctcgagaa caattgacaa
     5761 cattattcaa cgataaaaaa caagcaattg aagcgaatat tcaagcaacg gtagaagaaa
     5821 gaaatagtat attagcacag ttacaaaata tttatgacac tgctattgga caaattgatc
     5881 aagatcgtag caatgcacaa gttgataaaa cagcatcatt aaatctacaa acaatacatg
     5941 atttagatgt acatcctatt aaaaagccag atgctgaaaa aacgattaat gatgatcttg
     6001 cacgcgtcac tgctttagtg caaaattatc gaaaagtaag taatcgtaat aaggctgatg
     6061 cattaaaagc tataactgct ttaaaattac aaatggatga agaattaaaa acagcacgca
     6121 ctaatgctga tgttgatgca gttttaaaac gatttaatgt tgcattaagc gatatagaag
     6181 cagtaattac tgaaaaagaa aatagcttac tgcgaattga taacattgct caacaaacat
     6241 atgcgaaatt caaagcgatc gcaacaccag aacaattagc taaagtaaaa gtattaattg
     6301 atcaatatgt tgcagatggc aatagaatga ttgatgaaga tgcgacatta aatgacatca
     6361 aacaacacac gcaattcatt gttgatgaaa ttttagcaat taaattacca gctgaagcga
     6421 cgaaagtatc accaaaagaa attcagccag ctccaaaagt ttgtacgcct attaaaaaag
     6481 aagagacaca tgaatcgcgc aaagttgaaa aagaacttcc aaatacaggt tctgaaggaa
     6541 tggatttacc attgaaagaa tttgcactga ttacaggtgc ggctttgtta gctagaagac
     6601 gtactaaaaa cgaaaaagaa tcataattaa cgaaatgacc ttaatataac gacacttttt
     6661 agtgactcag ttatattaag gtcattttta tttgaatgaa aaagttgatc tactaaagag
     6721 aattgaacca aattttatac tattattcca ttgatgcatg tgagtaatgt ccggcatata
     6781 atccagcgac atgtcctgtt acgagtgcac ttgtaatatt ataaccacca gtataaccat
     6841 gtatatctaa tacttcacca cataaaaata atcccggaac taatttagac atcattgttt
     6901 taggttgaat ttctttaagt gacacaccac cacctgtgac aaatgcctta tctataggta
     6961 atgtcccgtt caccttaaat acaaaccctt taaacatatt tactaagtcg ttcaattgtt
     7021 gatttgataa gtgatgtgat gtggtatttt catcgattcc tgcttgttcc agcatgaaca
     7081 gtaagtagcg ctcttcaatt agaccatgca aactgttttt aatgatttta tctggtgtgt
     7141 ccgataataa tgatgtgatg tgttgtttta attgttcatg gtttaattca ggaaatgcat
     7201 cgattgccat agaaatgtgc tgtgtctttt gatttttttg ttctttataa acaaactgac
     7261 tacatcttaa tgcagctgga ccactgatac caaaatgagt aaataacata tccatttgat
     7321 gactgatgcg ttttttacca tttttcttaa gtactgacaa ttcaacatct tttaaactta
     7381 aaccttttag acgattggat ttgatgaaag gttcagctga tgtaattgga acttcggtcg
     7441 ggaataactc agtaatggta tgacctaaat cttgtgcgaa cttataacca tcaccagttg
     7501 aaccagtttg agggacactt gtaccacctg tagcaatcac tagcgaatgg ctttcataac
     7561 tattattttg agtatgtaca gtgaaagttt ggtctgtatt aacttcgatt ctactaacag
     7621 cttcttcttc tttaatcgtt acatgttggc gttcgatagt tgtcactaat gtatcaacca
     7681 cgtcttgtgc tttgttggaa actggaaaca tacgcccgtg atcttcttct tttaatttaa
     7741 cacccctaga ctcaaaaaaa tctatgatgg attcattatc aaaaattgaa aagggactat
     7801 ataaaaattt cccatttcca ggaatgttct taataatttc agcatatggt aatcgattag
     7861 ttacgttaca tctaccgcca ccagatattt taagtttacg acctagacct ttcttttttt
     7921 caatgagtaa cacactgcta ctttgttcgc ttgcagctac tgccgccatt aagccgctag
     7981 gtccgcctcc gataataatt gtttgataca tatacgcttc ctccaaattt gttactggac
     8041 attcaattgc tattttatag tactttttta aactttgcta tatctcttgt gttatgagat
     8101 gacaattatg ttgaatatat ttataatgtg aacttcataa aaaatgaaga tgtatgtgta
     8161 tgataagaat gatttttcta ctgttatgcg atgttcatct caaatagtag tataatgttt
     8221 atatgaaatt tcgtaatatt ctaatcaaaa tctagtattc aatgacaatg tgttgataat
     8281 tttgttatga taattcattg aatatacgac aatgaaataa agttttgtga tatattcata
     8341 ataatgaaaa atgattttac agagaaacag cttttagttt acaaaacttt aataaacatg
     8401 agatagggag attcgtaatg agtgaaagta aagaaatggt gcgtggaacc tttttaatta
     8461 ccattagtat attaattacc aaggtattgg gcgtactttt tatcattcca ttcaactatt
     8521 taattggtgg acaagaaaat atggcgccgt tcacatacgc ttatgcacca tataatattg
     8581 caattgcagt tgcgacagca ggtgtaccat tagcagcttc gaaatatgtt gcgaaatata
     8641 atgctattgg ggcatataaa gtaagtcaga aattttataa atcgagtttt attgtaatga
     8701 gtattaccgg tgttttaggt ttcttggtac tgtatttctt agcaccttat atttctgaat
     8761 taacattagc tagaaacatt catgataaaa acggttggtc agtcgatgat attacttgga
     8821 ttataagaat cattagtatg gttgttatct ttattcctgt attagcgaca tggagaggga
     8881 tattccaagg ttataaatct atggggccaa cagcagtgtc agaagtaact gagcaaattg
     8941 cacgcgtgat tttcatatta atcggaagtt atttagtact aaatgtcttt gatggctcta
     9001 ttttattagc caatggtatt gctacttttg cagcagcagt tggtgcgatt attggtatat
     9061 tcacactctg gtattactgg agaaagcgta agcataatat tgatcgtatg gtcgaatctg
     9121 attacacaga tatagatgtg tcatatggca agatgtataa agaaattatt gcttatagta
     9181 taccgttcgt tattgtaagt ttgaattatc cattatttaa cttagtagat caatttacac
     9241 ataacggtgc tttatcttta gttggtatac cttcacagtt acaagatata ttctttaata
     9301 tgctaaatat gtcaactaat aaaattgtaa tgattccgac atcattaagt gctggttttg
     9361 cagtgagttt aattccttat attacaaaaa catttgcaga aggtcgctta catgaaatgc
     9421 atcatcaaat tagaacatct attggtgtat taatgtttat aactgttcca gctagtattg
     9481 gaattatggc cttggcacaa ccattattca cagttttcta tggttacgat ccaattgttt
     9541 taggtcatga ccctaaccat gatggtagtc gcttattatt ctattatgcg cctgtagcaa
     9601 tactaatttc actattaagt gtaacggcat caatgttaca aggtatagat aaacagaaat
     9661 taacagttta tgttatttta gcttctgtag ttatcaagtt agcgttaaac tatccattaa
     9721 ttatgttatt ccatacacct ggtgcaattt taagtactag tatcgcatta ttatttgcaa
     9781 ttggatgtaa tttctatatt cttaaaaaat atgcgaagtt taaattcagc tatagttgga
     9841 ttcattttgc aaaaatattc ttgtattcat ttattatgat gctaggtgta gaattagtat
     9901 ttttccttgc aaatctattc ttagaaccta ctaaacttgg ttacttaatc attattattt
     9961 taggtgttac agtaggtatt ctaatttacg gtacaatcac aattaaaacg cgtcttgcgg
    10021 acgaattctt aggtgaaatt cctgaaaaat taagacgtag agttaggttt ttacgatgag
    10081 aatagataaa tttttagcaa atatgggcgt cggtacacgt aatgaggtca aacagttact
    10141 taaaaaaggc cttgtaaatg tcaacgaaca agtaattaaa tcaccaaaaa cacatataga
    10201 accagaaaac gataagataa cagttcgtgg agaattaata gaatacattg aaaatgtcta
    10261 tattatgtta aataagccaa aaggttatat atcagcaact gaagatcatc attcaaaaac
    10321 cgttattgat ttaatacctg aataccaaca tctaaatatt tttccggttg gtcgtcttga
    10381 taaagataca gaagggcttt tattgataac gaatgatggt gattttaatc atgaattaat
    10441 gagtccaaac aaacatgttt ctaaaaaata tgaagttatt tcagcaaatc ctatcactga
    10501 agacgacatt caagctttta aagagggtgt aacactgact gatggcaagg ttaagcctgc
    10561 aatattaact tatattgata atcaaacgtc acacgtaaca atttatgaag gaaaatatca
    10621 tcaagttaaa cgaatgtttc atagcattca aaatgaggta ttacatttaa gacgtatcaa
    10681 aattgctgat ttagaattgg acagcaattt agattcagga gaatatcgtt tattaactga
    10741 aaatgatttt gacaaattaa attataaata aaagggagac gattgatatg gcaaaaggta
    10801 atttatttaa agcgatttta ggtataggtg gcgctgtagc agctgtactt gttacacgta
    10861 aagatagtcg tgacaagctg aaagcagaat ataataaata taaacaagat cctcaaagct
    10921 ataaagataa tgctaaggat aaagcgacgc aattaggaac aattgctaat gaaacaatta
    10981 aagaagtaaa aacaaatccg aaagaatatg ctaatagatt aaaaaataat ccaaaagcat
    11041 ttttcaaaga agaaaaatca aaatttaccg aatatgacaa taagaatgac gaaagtattg
    11101 aaaaaggtaa atttgatgat gaaggtggcg cagcaccaaa taataattta cgtatcgtca
    11161 ctgaagaaga tttaaaaaag aataaaaatg cattatctga taaagaataa gatgtgagta
    11221 ggacagaaat gataagggag tgggacagaa atcatatttt agcaaaattt atttcgtcgt
    11281 cccaccccgg caaggttgac tagaattgaa aaaagcttgt tacaagcgta ttttcattca
    11341 gtcaactact gccaatataa tattgtaaac tataggacat ttattagtgt ttcaggttct
    11401 ttatcgttag tcatagctaa tatgcatata gaaagaagaa tacatgcgtg aaactcattc
    11461 ataagaaata ctaatatcta aagaaaacgt atttctttat cttttcgaaa ttctctgtgt
    11521 tggggccctt accccaactt gcacattatt gaaagctgac tattggccag cttctgtgtt
    11581 ggggccccgc caacttgcac attattgaaa gctgactatt ggccagcttc tgtgttgggg
    11641 cccttacccc aacttgcaca ttattgaaag ctaactattg gccagcttct atgttggggc
    11701 cccgccaact tgcattgtct gtagaatttc ttttcgaaat tctctatgtt ggggccccgg
    11761 ggcgcatttt cgttcggtta attactgtca atattaaatt gtgtgcctag tacattgact
    11821 tatatctcga gctcttgaat atgtgtattt taaatatata aattaaaaaa ggaacaaagc
    11881 agctatttat gatttgtgtc atatcaatag catcgttttg ttccttttta ttattttctg
    11941 acatcttatt gtagttttta tatcttttca tgtaaaatag aatttaactt atagaaaaaa
    12001 ggaagtcgat ttcgaatgtg gaaagaaaaa gttcaacaat acgaagatca aatcattaat
    12061 gacttaaaag gattattagc aattgaaagt gtgagagatg atgcaaaagc atcagaagac
    12121 gcaccagttg gtccaggtcc tcgtaaggca ttagactaca tgtatgaaat tgcacataga
    12181 gatggattta caacacatga tgtggatcat attgcaggaa gaattgaggc aggtaaagga
    12241 aatgacgtat taggtatctt atgtcatgtt gacgttgttc ctgctggtga tggatgggat
    12301 agtaatccgt tcgagccggt tgtaacagaa gatgctatca tagctagagg tacacttgat
    12361 gacaaaggtc caacaattgc tgcttattat gcaattaaga tattagaaga tatgaatgtg
    12421 gattggaaga aacgtattca tatgattatt ggtacggatg aagaatctga ttggaaatgt
    12481 acggatcgct attttaaaac agaagaaatg ccaacattag gttttgcacc agatgcagaa
    12541 tttccatgta ttcatggtga aaaaggcatt acaacatttg atttagttca aaataaactt
    12601 actgaagatc aagatgaacc tgattatgaa ttaataactt ttaaatctgg tgaacgttac
    12661 aacatggtac ctgatcatgc agaagcaaga gtgcttgtta aagaaaatat gacagatgtt
    12721 attcaagact ttgagtactt tttagaacaa aatcatttac aaggtgatag tactgttgat
    12781 agtggcattc tagttttaac agttgaaggt aaagcggttc atggtatgga tccatctatc
    12841 ggtgtgaatg cgggtcttta cttactaaaa ttcttagcat cattaaatct tgataataat
    12901 gcacaagcgt ttgtagcatt tagtaatcgc tacttattta attcagattt tggtgaaaag
    12961 atgggaatga aattccatac agatgtcatg ggtgacgtga caactaacat tggtgttatt
    13021 acatatgata atgaaaacgc aggtcttttc ggtatcaact tacgctaccc agaaggattt
    13081 gaatttgaaa aagctatgga tcgttttgca aatgagattc aacaatatgg ctttgaagtg
    13141 aaattaggta aagtccaacc accacattat gttgataaaa atgatccttt tgtacaaaag
    13201 ttagttactg catatagaaa tcaaacaaat gatatgactg aaccttatac tataggtggc
    13261 ggtacttatg cgagaaactt agacaagggt gtagcatttg gcgcaatgtt tagtgattct
    13321 gaagatttaa tgcatcagaa aaatgaatat atcactaaaa aacagttatt taacgcaact
    13381 agtatttact tagaagcaat ttattcatta tgcgtggagg aataatatat ggaaaaaatt
    13441 tttttaaatg gtgagtttgt aagtccaagt gaagcaaagg tttcatacaa cgacagagga
    13501 tacgtatttg gcgatggtat ttatgaatac attcgagtat ataatggtaa gttatttaca
    13561 gtaacagaac attatgaaag atttttacgt agtgccaatg agattggttt agatttaaat
    13621 tattctgtag aagaattaat tgaactatct cgtaaattag ttgatatgaa tcaaattgaa
    13681 actggggcaa tttatattca agcaacgcgt ggtgtagctg aaaggaatca tagcttcccg
    13741 acacctgaag tagaaccagc aattgttgct tatacaaaga gttatgatcg tccttatgat
    13801 catttagaaa atggtgtgaa tggtgttacc gttgaagata tccgatggtt acgttgcgac
    13861 attaaaagct tgaacttatt aggaaatgta ttagcaaaag aatatgctgt gaaatataat
    13921 gcagttgaag caattcaaca tcgaggtgaa actgtaactg aaggatcttc aagtaatgct
    13981 tatgcaatta aagacggtgt gatttataca catccgatta acaactatat tcttaatggt
    14041 attacacgaa ttgtaattaa aaaaattgcc gaagactata acatcccatt taaagaagaa
    14101 acgtttactg tagatttctt gaaaaacgca gatgaagtta ttgtttcaag tacttcagct
    14161 gaggttacac ctgttattaa attagatggt gaaccagtta atgatggtaa agttggccca
    14221 attacacgtc aactacaaga aggatttgaa aagtatatag agtcacacag tatttaaaat
    14281 tctttcatca tatttttaga ttaaattact taaatttatc aactttcgta agtgaattat
    14341 gttataattt aaaacgaagc ttaaaagtgt tgtttagaaa acacatatta gtaaaaagtg
    14401 ccattttgtt tctcattttc agttgaaata taatgataaa aattataaaa ttttctatga
    14461 gttacaaata tgatgtgcat catattttac taagtacgta aatgttacag ttcataaatt
    14521 tatgctaacc atgaaaatgg gatagcaatt attttgaaaa ctagagttta tcgcctacag
    14581 agattcaaaa acatgtagtt ttagacacgg taacattata tgtcaagtaa gtgactatag
    14641 aatgtatggt gtcaatgaca gacattacga tttaaattta gtcgtgtaat gtaggcattg
    14701 gttgaggatt tacaataatt atctggacat aatatttgta ccagtatggt gttataaatt
    14761 agaatatatg gctcttgaaa aacctatttc tagagccatt ttctaattga aagtgaggtg
    14821 gacgagttgg agcagtttta tcaattaggg tggacacttg attcagcagg tggtgcatct
    14881 ggtgaagcat atatggctga acaagatgga caaaagttgt ttttaaaacg aaattcaaat
    14941 ccatttattg cggcattatc agcagaaggt attgtgccca aattagtatg gacgaaacgc
    15001 atagaaacag gcgaggttgt tacagcacaa cattggaaaa atgggcgtga actatcttca
    15061 aacgaaatga agcaaacaag agttgcacat ttattaaaga agatacacaa ttctagacct
    15121 ttattaagta tgttaaagcg tatggaaatg gaacctatta ctcctgagat tatgcttaat
    15181 aaaattaatg cctctttatc aagagaagtt ttaacacatc atattgtgag aaaatcatta
    15241 acctatttag aagagcatat accgagttta gattcgcgtt ttttcactgt tgtacatggt
    15301 gatgtgaatc ataataattg gttattatcc gatcgagatg aactattttt agttgattgg
    15361 gaaggtgcaa tgattgcaga cccggcaatt gatatcggaa tgctgcttta caactatgtt
    15421 ccacaacaac aatggtctga atggcttgaa acatatggtg ttcaagagag cttgaattta
    15481 aataaacgta tgaaatggta tacggtaatt caatctatag gtcttgttca atggtatgaa
    15541 gagcaaaaaa gatataagga tatgaacact tggcttaaat tcctaaatga agttatgaat
    15601 agtaacatgt ttatttaaga ggagaataaa atatgagagt tcgatacaaa ccatgggctg
    15661 aagattattt aaaagatcat cctgaattgg ttgacatgga cggtcaacat gcagggaaaa
    15721 tgactgaatg gtttgataaa acgcaaccga tacacattga aattggttcg ggtatggggc
    15781 agtttattac aacattagct gctcaaaatc ctcatattaa ctatatttca atggaacgtg
    15841 agaaaagtat cgtttataaa gtattggata aagttaaaga gatgggttta acaaatttaa
    15901 agattatttg taatgacgcc attgaattaa atgaatattt taaagacggc gaagtttcgc
    15961 gtatttattt gaacttttca gatccatggc caaaaaatcg tcatgcaaaa cgacgtttaa
    16021 cgtatcatac gtttttagcg ttgtatcaac aaatcttaaa tgatgaagga gatttacatt
    16081 ttaaaactga taacagagga ctatttgcct acagtttaga aagtatgtct caatttggaa
    16141 tgtattttac aaaaataaat ctaaatttac atcaagaaga cgatggcagt aatattttaa
    16201 cagaatatga aaagaaattt tcggat
//
LOCUS       DALPQQ010000054        16049 bp    DNA     linear   BCT 22-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus strain K18-6-464
            SAMD00233528-rid16434743.denovo.054, whole genome shotgun sequence.
ACCESSION   DALPQQ010000054 DALPQQ010000000
VERSION     DALPQQ010000054.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMD00233528
            Sequence Read Archive: DRR236061
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 16049)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 16049)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001543423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001543423.1
            Genome Coverage       :: 77x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/22/2022 17:09:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,811
            CDSs (total)                      :: 2,743
            Genes (coding)                    :: 2,689
            CDSs (with protein)               :: 2,689
            Genes (RNA)                       :: 68
            rRNAs                             :: 2, 4, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 4, 2 (16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 54
            CDSs (without protein)            :: 54
            Pseudo Genes (ambiguous residues) :: 0 of 54
            Pseudo Genes (frameshifted)       :: 27 of 54
            Pseudo Genes (incomplete)         :: 27 of 54
            Pseudo Genes (internal stop)      :: 10 of 54
            Pseudo Genes (multiple problems)  :: 10 of 54
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..16049
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMD00233528-rid16434743.denovo.054"
                     /strain="K18-6-464"
                     /db_xref="taxon:1280"
                     /geo_loc_name="Japan: Niigata"
     gene            28..1596
                     /locus_tag="O7798_001422"
     CDS             28..1596
                     /locus_tag="O7798_001422"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499502.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alanine:cation symporter family protein"
                     /protein_id="HDC2863686.1"
                     /translation="MIEKLVTFLNEVVWSKPLVYGLLITGVLFTLRMRFFQVRHFKEM
                     IRLMFQGEKSPNGISSFQAIAMSLAGRVGTGNIVGVSTAIFIGGPGAVFWMWITAFLG
                     ASSAFIESTLGQIFKRVENNEYRGGPAYYIEYGIGGKFGKIYGIIFAIVTIISVGLLL
                     PGVQSNAIASSMHNAIHVPQWLMGGIVVVILGLIIFGGVRSIANVATAVVPFMAIIYI
                     LMAVIIICINIQEVPALFALIFKSAFGLQSAFGGIVGAMIEIGVKRGLYSNEAGQGTG
                     PHAAAAAEVSHPSKQGLVQAFSVYIDTLFVCTATALIILISGTYNVTDGTVNANGTPH
                     LIKDGGIYVENATGKDYSGTAMYAQAGIDKAFHGSGYQFDPTFSGVGSYFIAFALFFF
                     AFTTILSYYYITETNVAYLTRNQNNQVSSIFINIARVIILFATFYGAVKTADVAWAFG
                     DLGVGLMAWLNIIAIWILHKPAVNALKDYEIQKKRLGNGYNAVYQPDPNKLPNAVFWL
                     KTYPERLKQARAKK"
     gene            1739..2497
                     /locus_tag="O7798_001423"
     CDS             1739..2497
                     /locus_tag="O7798_001423"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499503.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="esterase family protein"
                     /protein_id="HDC2863687.1"
                     /translation="MSEFKTGKINKHVLYSNILNRDVTLSIYLPESYNQLVKYNVILC
                     FDGLDFLRFGRIQRTYESLIKEARIDDAIIVGFHYEDVDKRREEFHPQGSRSHLTIQS
                     VGKEILPFIDSTFSTLKVGNARLLVGDSLAGSIALLTALTYPTIFSRVAMLSPHSDEK
                     VLDKLNQCANKEQLTIWHVIGLDEKDFTLPTNGKRADFLTPNRELAEQIKKYNITYYY
                     DEFDGGHQWKDWKPLLSDILLYFLSKNTDDQLYE"
     gene            2691..3200
                     /locus_tag="O7798_001424"
     CDS             2691..3200
                     /locus_tag="O7798_001424"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499504.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YjcG family protein"
                     /protein_id="HDC2863688.1"
                     /translation="MILGLALIPSKSFQEAVDSYRKRYDKQYSRIKPHVTIKAPFEIK
                     DGDLDSVIEQVRARINGIPAVEVHATKASSFKPTNNVIYFKVAKTDDLEELFNRFNGE
                     DFYGEAEHVFVPHFTIAQGLSSQEFEDIFGQVALAGVDHKEIIDELTLLRFDDDEDKW
                     KVIETFKLA"
     gene            complement(3313..4503)
                     /locus_tag="O7798_001425"
     CDS             complement(3313..4503)
                     /locus_tag="O7798_001425"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001154225.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HDC2863689.1"
                     /translation="MQDSSLNNYANHKNFILMLIILFLMEFARGMYILSYINFLPTVT
                     SIAVAITSLAFSIHFIADASTNFVIGFLLKKFGTKIVLTTGFILAFTSLFLVIWFPAS
                     PFVIIFSAMMLGIAVSPIWVIMLSSVEEDKRGKQMGYVYFSWLLGLLVGMVFMNLLIK
                     VHPTRFAFMMSLVVLIAWILYYFVDVKLTNYNTRPVKAQLRQIVDVTKRHLLLFPGIL
                     LQGAAIAALVPILPTYATKVINVSTIEYTVAIIIGGIGCAVSMLFLSKLIDNRSRNFM
                     YGVILSGFILYMILIFTLSMIVNIHILWIIALAIGLMYGILLPAWNTFMARFIKSDEQ
                     EETWGVFNSIQGFGSMIGPLFGGLITQFTNNLNNTFYFSALIFLVLAVFYGSYFIVNR
                     EKAK"
     gene            complement(4481..5656)
                     /locus_tag="O7798_001426"
     CDS             complement(4481..5656)
                     /locus_tag="O7798_001426"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499506.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="diglucosyl diacylglycerol synthase"
                     /protein_id="HDC2863690.1"
                     /translation="MVTQNKKILIITGSFGNGHMQVTQSIVNQLNDMNLDHLSVIEHD
                     LFMEAHPILTSICKKWYINSFKYFRNMYKGFYYSRPDKLDKCFYKYYGLNKLINLLIK
                     EKPDLILLTFPTPVMSVLTEQFNINIPVATVMTDYRLHKNWITPYSTRYYVATKETKQ
                     DFIDVGIDPSTVKVTGIPIDNKFETPINQKQWLIDNNLDPDKQTILMSAGAFGVSKGF
                     DTMITDILAKSANAQVVMICGKSKELKRSLTAKFKSNENVLILGYTKHMNEWMASSQL
                     MITKPGGITITEGFARCIPMIFLNPAPGQELENALYFEEKGFGKIADTPEEAIKIVAS
                     LTNGNEQLTNMISTMEQDKIKYATQTICRDLLDLIGHSSQPQEIYGKVPLYARFFVK"
     gene            6089..7570
                     /locus_tag="O7798_001427"
     CDS             6089..7570
                     /locus_tag="O7798_001427"
                     /EC_number="6.3.2.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499507.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--L-
                     lysine ligase"
                     /protein_id="HDC2863691.1"
                     /translation="MDASTLFKKVKVKRVLGSLEQQIDDITTDSRTAREGSIFVASVG
                     YTVDSHKFCQNVADQGCKLVVVNKEQSLPANVTQVVVPDTLRVASILAHTLYDYPSHQ
                     LVTFGVTGTNGKTSIATMIHLIQRKLQKNSAYLGTNGFQINETKTKGANTTPETVSLT
                     KKIKEAVDAGAESMTLEVSSHGLVLGRLRGVEFDVAIFSNLTQDHLDFHGTMEAYGHA
                     KSLLFSQLGEDLSKEKYVVLNNDDSFSEYLRTVTPYEVFSYGIDEEAQFMAKNIQESL
                     QGVSFDFVTPFGTYPVKSPYVGKFNISNIMAAMIAVWSKGTSLETIIKAVENLEPVEG
                     RLEVLDPSLPIDLIIDYAHTADGMNKLIDAVQPFVKQKLIFLVGMAGERDLTKTPEMG
                     RVACRADYVIFTPDNPANDDPKMLTAELAKGATHQNYIEFDDRAEGIKHAIDIAEPGD
                     TVVLASKGREPYQIMPGHIKVPHRDDLIGLEAAYKKFGGGPVD"
     gene            7554..7814
                     /locus_tag="O7798_001428"
     CDS             7554..7814
                     /locus_tag="O7798_001428"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499508.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YueH family protein"
                     /protein_id="HDC2863692.1"
                     /translation="MALLINKRFIDEGKTIDVYLFEALNNQIIIAIPDWFWSYQMAMT
                     LDEETCFEAILMQLFVFKEEEEAESIASQLTDWIETYKKEKD"
     gene            7814..9376
                     /locus_tag="O7798_001429"
     CDS             7814..9376
                     /locus_tag="O7798_001429"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499509.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide chain release factor 3"
                     /protein_id="HDC2863693.1"
                     /translation="MNLKQEVESRKTFAIISHPDAGKTTLTEKLLYFSGAIREAGTVK
                     GKKTGKFATSDWMKVEQERGISVTSSVMQFDYDDYKINILDTPGHEDFSEDTYRTLMA
                     VDSAVMVIDCAKGIEPQTLKLFKVCKMRGIPIFTFINKLDRVGKEPFELLDEIEETLN
                     IETYPMNWPIGMGQSFFGIIDRKSKTIEPFRDEENILHLNDDFELEEDHAITNDSDFE
                     QAIEELMLVEEAGEAFDNDALLSGDLTPVFFGSALANFGVQNFLNAYVDFAPMPNARQ
                     TKEDVEVSPFDDSFSGFIFKIQANMDPKHRDRIAFMRVVSGAFERGMDVTLQRTNKKQ
                     KITRSTSFMADDKETVNHAVAGDIIGLYDTGNYQIGDTLVGGKQTYSFQDLPQFTPEI
                     FMKVSAKNVMKQKHFHKGIEQLVQEGAIQYYKTLHTNQIILGAVGQLQFEVFEHRMKN
                     EYNVDVVMEPVGRKIARWIENEDQITDKMNTSRSILVKDRYDDLVFLFENEFATRWFE
                     EKFPEIKLYSLL"
     gene            9678..10481
                     /locus_tag="O7798_001430"
     CDS             9678..10481
                     /locus_tag="O7798_001430"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499510.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TerC family protein"
                     /protein_id="HDC2863694.1"
                     /translation="MLMDPSLILPYLWVLVVLVFLEGLLAADNAIVMAVMVKHLPPEQ
                     RKKALFYGLLGAFVFRFLALFLISIIANFWFIQAAGAVYLIYMSIKNLWQFFKHPEIE
                     SPEAGDDHHYDESGEEIKASNKSFWGTVLKIEFADIAFAIDSMLAALAIAVTLPKVGI
                     HFGGMDLGQFVVMFLGGMIGVILMRYAATWFVELLNKYPGLEGAAFAIVGWVGVKLVV
                     MVLAHPDIAVLPEHFPHGVLWQSIFWTVLIGLVIIGWLGSVVKNKKPHK"
     gene            10700..13024
                     /locus_tag="O7798_001431"
     CDS             10700..13024
                     /locus_tag="O7798_001431"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499511.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="trypsin-like peptidase domain-containing
                     protein"
                     /protein_id="HDC2863695.1"
                     /translation="MEWTLVDIGKKHVIPKSQYRRKRREFFHNEDREENLNQHQDKQN
                     IDNTTSKKADKQIHKDSIDKHERFKNSLSSHLEQRNRDVNENKAEESKSNQDSKSAYN
                     RDHYLTDDVSKKQNSLDSVDQDTEKSKYYEQNSEATLSTKSTDKVESTEMRKLSSDKN
                     KVGHEEQHVLSKPSEHDKETRIDSESSRTDSDSSMQTEKIKKDSSDGNKSSNLKSEVI
                     SDKSNTVPKLSESDDEVNNQKPLTLPEEQKLKRQQSQNEQTKTYTYGDSEQNDKSNHE
                     NDLSHHIPSISDDKDNVMRENHIVDDNPDNDINTPSLSKTDDDRKLDEKIHVEDKHKQ
                     NADSSETVGYQSQSTASHRSTEKRNISINDHDKLNGQKTNTKTSANNNQKKATSKLNK
                     GRATNNNYSDILKKFWMMYWPKLVILMGIIILIVILNAIFNNVNKNDRMNDNNDADAQ
                     KYTTTMKNANNTVKSVVTVENETSKDSSLPKDKASQDEVGSGVVYKKSGDTLYIVTNA
                     HVVGDKENQKITFSNNKSVVGKVLGKDKWSDLAVVKATSSDSSVKEIAIGDSNNLVLG
                     EPILVVGNPLGVDFKGTVTEGIISGLNRNVPIDFDKDNKYDMLMKAFQIDASVNPGNS
                     GGAVVNREGKLIGVVAAKISMPNVENMSFAIPVNEVQKIVKDLETKGKIDYPDVGVKM
                     KNIASLNSFERQAVKLPGKVKNGVVVDQVDNNGLADQSGLKKGDVITELDGKLLEDDL
                     RFRQIIFSHKDDLKSITAKIYRDGKEKEINIKLK"
     gene            13041..14399
                     /locus_tag="O7798_001432"
     CDS             13041..14399
                     /locus_tag="O7798_001432"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499512.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TrkH family potassium uptake protein"
                     /protein_id="HDC2863696.1"
                     /translation="MSIFSQFLKRSSPQQGIVLYYIVAIVIAFLLLNLPYVHKPGVEV
                     NPIDTLFVAVSGISVTGLSPISIVDTYSTFGQLIILVILNIGGIGVMAIGTMLWVVLG
                     KHIGIRERQLIMLDNNKNTMSGTVKLIIDIVKSIFVIELVGAMLLAFYFYRDNPDLKY
                     AIMQGVFVSISATTNGGLDITGKSLIPYAHDYFVQAIVIFLIILGSIGFPVLLEVKAY
                     IQNRVTNFRFSLFTKITTSTYLFLFIVGVLAILLFEHNHAFKGLSWHQSLFYSLFQSA
                     TTRSAGLQTIDVTTLSDPTNIIMGILMFIGSSPSSVGGGIRTTTFAILILFLINFSNN
                     ADKTSIKVYNREVHIMDIQRSFAVFTMATILTFLGMLIISATENGKLTFLQVFFEVMS
                     AFGTCGLSLGVTSDISDISKVVLMILMFIGRVGLISFIIMIAGRREPDKFHYPKERIQ
                     IG"
     gene            14538..16049
                     /locus_tag="O7798_001433"
     CDS             14538..16049
                     /locus_tag="O7798_001433"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499513.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional metallophosphatase/5'-nucleotidase"
                     /protein_id="HDC2863697.1"
                     /translation="MEKNENINVEILTTSDMHSHFLNGDYGSNIYRAGTYVNQVRAQN
                     HRVILLDSGGSLAGSLAAYYYAIVAPYKRHPMIKLMNRMHYDASGVSPSEFKFGLSFL
                     TRSIALARFPWLSANIEYNVTKEPYFSTPYCIKHFGDLKIAIVGVTADGLMENEYSEM
                     EQDVSIEKTLVASKRWIRYIHEVEEPDFLIVIYHGGLNKISNSTKNKKASSNEAEKLM
                     EELGVIDLMITAHQHQTIVGQDHETYYVQAGQDAKELVHLSINFKKRTTTYDVESIDS
                     KVIDLNEYEEDQELLDLTFYDRKAVAYWSQEIISDKGLMLSVNGLQDLVCQTHPFSQL
                     LHDAIHLAFDNDITCVHVPMNGEKGLSGQIRNEDLYHAYPYPDKPMDMTISGQNIKDI
                     LEYSYSHLDFVNEQLSLTIIDETLCTMWQGFNYEIDMNQEPGQRVMLDQIDLTKSYRV
                     TMTDYCYRNYKNYLKNAIIHESYDETMSTLIAEKLRDPNYRISCSDNFIVKNR"
BASE COUNT         5617 a         2219 c         3010 g         5203 t
ORIGIN      
        1 ttatgtttaa acaatagggg gaatcttatg attgaaaaat tagtaacctt tttaaatgag
       61 gttgtttgga gtaagccatt agtttatggt ttgctaatta ctggtgtgct atttacattg
      121 cgtatgcgat tttttcaagt tagacatttt aaagaaatga ttcgattaat gtttcaagga
      181 gagaagtctc ctaatggtat ttcaagtttt caagcgatag ccatgtcttt agcaggcagg
      241 gttggtacag gtaatattgt cggtgtatct actgcaatat ttataggagg acctggtgca
      301 gtattttgga tgtggattac tgcgttttta ggtgcaagta gtgcttttat tgaatctaca
      361 cttggtcaaa tattcaagag agttgaaaat aatgaatacc gtggtggacc agcgtattat
      421 attgaatatg gtattggtgg taaatttggt aaaatttacg gaattatctt tgctattgtt
      481 acgattatct cagtaggtct attgcttcct ggtgtgcaat ctaacgctat agcaagttct
      541 atgcataatg cgattcatgt tccacaatgg ttaatgggtg gtattgttgt agttattttg
      601 ggattaatta tttttggtgg tgtacgtagt attgccaatg ttgcaacagc cgttgtacca
      661 tttatggcaa ttatttacat actgatggct gtcattatca tttgtatcaa tatacaagaa
      721 gtgccagcgt tatttgcatt aattttcaaa tcagcatttg gattacaatc tgcttttggt
      781 ggtatcgttg gcgcaatgat agagattggt gttaaacgtg gattatattc aaatgaggct
      841 ggtcaaggta caggtccaca cgcagcagcg gcagcagaag tatcacatcc aagtaaacaa
      901 ggtctagtac aagcattttc agtttatatt gatacattat ttgtatgtac tgcaactgct
      961 ctgattatac ttatttctgg tacatataat gtgactgatg gtacggttaa tgcgaatggc
     1021 acaccgcatt taattaaaga tggcggtatt tatgttgaaa atgcaacagg taaagattat
     1081 tcaggtactg cgatgtatgc acaagccggc attgataaag cgttccatgg cagtggttat
     1141 caatttgatc ctactttctc tggcgtaggt tcgtacttta ttgcatttgc tttattcttc
     1201 tttgcattta ctacaatttt gtcgtactac tacattacag aaacaaatgt tgcttattta
     1261 acgcgtaatc aaaataatca agtttcatcg atatttatta atattgctcg tgtgattatt
     1321 ttgttcgcta cattttacgg tgcagttaaa acagctgatg tagcatgggc attcggtgat
     1381 ttaggtgtag gtctaatggc ttggttaaat atcattgcga tttggatttt acataagcct
     1441 gccgtaaatg ctttaaaaga ttatgaaatt caaaagaaac gtttaggcaa cggttataat
     1501 gcagtttatc aacctgatcc gaataaatta cctaatgctg tcttttggtt gaagacgtat
     1561 ccagaacgtt taaaacaagc acgtgccaaa aagtaatcta cttttgttta tagtatatgt
     1621 agtgatcatt tgataaaaaa gaaaagtatt gagaatttta ggtgctcaga aatttgaatt
     1681 ttaaaaatat agtgtctctt ggtacaataa caatacaact actagggggc acttttttat
     1741 gtcagaattt aaaactggta agattaataa acatgtttta tatagtaata ttttaaatag
     1801 agatgtcacg ttaagtattt atttaccaga atcttataat caacttgtta aatataatgt
     1861 cattctttgc tttgacggat tagatttttt acgtttcggg agaatacaac gtacatatga
     1921 atcgttaatc aaagaagcgc gtattgatga tgcgatcatt gttggattcc attatgaaga
     1981 cgttgataag cgtagagagg aatttcatcc acaaggaagt cgttctcatt taactattca
     2041 atcagtcggt aaagaaatat tgccatttat tgactcgacg ttttctacac tgaaagtagg
     2101 taatgcaagg ttattagtag gggatagttt agcgggtagt attgccttat taacggcgtt
     2161 gacctatcca acgattttta gtcgtgtagc aatgttaagt ccacattcag atgaaaaagt
     2221 attagataag ctaaatcaat gtgcaaataa agaacaattg acaatttggc atgtcattgg
     2281 tctagatgaa aaagatttta ctttaccaac aaatggtaag cgtgccgatt tcttaacacc
     2341 gaatagagaa ttagctgaac aaattaagaa atataatata acttattatt acgatgaatt
     2401 tgatggtggt caccaatgga aagattggaa accattgctg tcagatatat tattgtattt
     2461 tttaagtaaa aacacagatg atcaacttta tgaataattt acattagtag atttagtatg
     2521 aattgtcttc atatagtctg gtctataata taatttataa aagattttac tgtttaattt
     2581 aatttaaatt tgacgaaatt gcaaaagatg tataatgaat tatttttaat gtaacggttt
     2641 tcaaagaaat ttgatataat agcaataggt taaacaaagg aggaattcag atgattttag
     2701 gattagcatt aattccatca aagtcatttc aagaagcggt ggattcttac cgtaaaagat
     2761 atgataaaca gtattcacga attaaaccac atgtgacaat taaagcgcca tttgaaatta
     2821 aagatggtga tttagattct gtcattgaac aggttagagc tcgtattaat ggtataccag
     2881 cagtagaagt tcatgctaca aaagcttcta gcttcaaacc aacgaacaat gtgatttact
     2941 ttaaagttgc gaagacggac gacttagaag aattgtttaa tcgctttaat ggagaagatt
     3001 tctatggaga agctgaacat gtttttgtgc cacactttac aatagcacaa ggactatcta
     3061 gccaagaatt cgaagatatt tttggtcaag tagcattagc tggggtagac cataaagaaa
     3121 ttatcgatga attaactttg ttacgttttg acgatgacga agataaatgg aaagttattg
     3181 aaacgtttaa attagcttaa gtaacataat agtattgtta atcgtagtat gtttgaatta
     3241 ataagaaaat ggtcattttt attgaatgta ataaaaatga ccattttctt tattttaaaa
     3301 tacgttttaa ccttacttag ctttttctct atttactata aagtagcttc cataaaatac
     3361 agctaagact aaaaagatta atgccgagaa ataaaatgta ttgtttaaat tgttggtaaa
     3421 ttgtgtaatt aatccgccaa ataatggccc tatcattgag ccgaatcctt ggatactatt
     3481 aaaaacaccc caagtttctt cttgttcatc tgatttgata aatcgtgcca taaaggtatt
     3541 ccatgctggt aataagatgc catacattag accgatagct aaagcgataa tccacaagat
     3601 gtgaatatta acaatcatag atagagtaaa aattaatatc atgtataaaa taaatccgct
     3661 tagaataaca ccatacataa agtttctgct gcggttatct attagtttcg ataaaaatag
     3721 catcgaaact gcacagccga taccaccaat aatgattgca acagtatatt caattgtgct
     3781 tacgttaata accttagtag catatgttgg taatatagga actagggcag caattgcggc
     3841 accttgtaaa agaataccag ggaacaacaa taaatggcgc tttgtcacat caacaatttg
     3901 tctcaattga gctttaactg gacgagtatt ataatttgtt aactttacat cgacaaaata
     3961 atataatatc catgcaatta aaacgactaa agacatcatg aaggcaaagc gtgttgggtg
     4021 cactttgata agtagattca taaaaaccat acctaccaat aggcctaaca accatgaaaa
     4081 ataaacatag cccatttgtt tgccacgttt atcttcttca acactggata acataatgac
     4141 ccaaatagga ctaactgcaa taccgagcat catagcacta aatatgatta caaaaggtga
     4201 tgctggaaac caaataacta aaaataaact tgtaaatgct aaaataaatc cagtcgttaa
     4261 aacgattttt gtgccgaatt ttttcagtaa aaatcctata acaaagtttg tagatgcatc
     4321 agcaataaaa tgtattgaaa atgctagaga cgttattgct acagcaatgg atgtaactgt
     4381 tggcaagaaa ttaatatagc ttaggatata catgcctctc gcaaattcca ttaaaaataa
     4441 gataataagc attaaaatga aatttttatg attagcgtaa ttatttaacg aagaatcttg
     4501 catataaagg aacctttcca taaatctctt gtggttgtga tgaatgaccg attaaatcaa
     4561 gtaagtctcg acatattgtc tgtgtagcat acttaatttt atcttgttcc attgtactaa
     4621 tcatgttagt taattgctca ttaccgttag ttaaacttgc tacaattttt attgcttctt
     4681 ctggagtatc agcgatttta ccaaaacctt tttcttcaaa gtaaagggca ttttcaagct
     4741 cttgaccagg tgcaggattt aggaaaatca ttggaataca acgggcgaaa ccttcagtta
     4801 ttgtgatacc accaggtttc gtaatcataa gttgacttga tgccatccat tcattcatgt
     4861 gtttggtata acctagaatc aatacattct cgttagattt aaacttagct gttaaagaac
     4921 gctttagctc tttgctctta ccacaaatca taactacttg tgcatttgca cttttcgcta
     4981 atatatcagt aatcatcgtg tcaaaacctt tagatacacc aaatgcacca gctgacatta
     5041 aaatagtttg cttatctgga tctaagttgt tgtctattaa ccactgcttt tgattaatag
     5101 gcgtttcaaa tttgttatca ataggaatac ctgtcacttt aactgttgaa ggatcaatac
     5161 ctacgtctat gaagtcttgt ttcgtttctt ttgttgccac ataatatctt gttgaatacg
     5221 gcgtaatcca gtttttatgt aagcgatagt ctgtcatcac tgtagcaact ggaatattaa
     5281 tgttaaattg ctcagttagt accgacataa ctggtgtagg aaacgttaat aatattaaat
     5341 ctggcttttc ttttatcaat aaattaatta acttattaag tccatagtat ttgtaaaaac
     5401 atttgtctag tttatctggg cggctgtaat aaaacccttt gtacatattt ctaaaatatt
     5461 taaagctatt gatataccat tttttacaaa tagaagtcaa aattggatga gcttccataa
     5521 ataaatcgtg ctcaatgacg cttaaatggt ctagattcat atcattaagt tgattaacga
     5581 tactctgtgt aacttgcata tgaccgttac cgaatgagcc agtaataatc aatatctttt
     5641 tattttgagt aaccattaat agccaccctc cgttagtttg aaaattttat ttaagtgtaa
     5701 cttattttac ggcattataa aagaaataaa gacgcaaagt cgttacattt atagcaattt
     5761 taatctatag atgaattgat acaaaataaa acgttatttt ataaagcaat ttattgttct
     5821 atgttttatt tgtatattta aaattatcca gtatacaatt atagcatatt tttggaaaca
     5881 attatgatat tataccatgt tacaagatgg ttttaataat ttaagatgag ccataattgt
     5941 aaaactaatt cataataccg tatgttttat ttttaatagt agaaattaga aaatgctgat
     6001 tagtaggata taacagtgaa attataaatt tattaacatc aacaaaacgt gtataataaa
     6061 catattgtag aaaaaggagc ggttcagttt ggatgcaagt acgttgttta agaaagtaaa
     6121 agtaaagcgt gtattgggtt ctttagaaca acaaatagat gatatcacta ctgattcacg
     6181 tacagcgaga gaaggtagca tttttgtcgc ttcagttgga tatactgtag acagtcataa
     6241 gttctgtcaa aatgtagctg atcaagggtg taagttggta gtggtcaata aagaacaatc
     6301 attaccagct aacgtaacac aagtggttgt gccggacaca ttaagagtag ctagtattct
     6361 agcacacaca ttatatgatt atccgagtca tcagttagtg acatttggtg taacgggtac
     6421 aaatggtaaa acttctattg cgacgatgat tcatttaatt caaagaaagt tacaaaaaaa
     6481 tagtgcatat ttaggaacta atggtttcca aattaatgaa acaaagacaa aaggtgcaaa
     6541 tacgacacca gaaacagttt ctttaactaa gaaaattaaa gaagcagttg atgcaggcgc
     6601 tgaatctatg acattagaag tatcaagcca tggcttagta ttaggacgac tgcgaggcgt
     6661 tgaatttgac gttgcaatat tttcaaattt aacacaagac catttagatt ttcatggcac
     6721 aatggaagca tacggacacg cgaagtcttt attgtttagt caattaggtg aagatttgtc
     6781 gaaagaaaag tatgtcgtgt taaacaatga cgattcattt tctgagtatt taagaacagt
     6841 gacgccttat gaagtattta gttatggaat tgatgaggaa gcccaattta tggctaaaaa
     6901 tattcaagaa tctttacaag gtgtcagctt tgattttgta acgccttttg gaacttaccc
     6961 agtaaaatcg ccttatgttg gtaagtttaa tatttctaat attatggcgg caatgattgc
     7021 ggtgtggagt aaaggtacat ctttagaaac gattattaaa gctgttgaaa atttagaacc
     7081 tgttgaaggg cgattagaag ttttagatcc ttcgttacct attgatttaa ttatcgatta
     7141 tgcacataca gctgatggta tgaacaaatt aatcgatgca gtacagcctt ttgtaaagca
     7201 aaagttgata tttttagttg gtatggcagg cgaacgtgat ttaactaaaa cgcctgaaat
     7261 ggggcgagtt gcctgtcgtg cagattatgt cattttcaca ccggataatc cggcaaatga
     7321 tgacccgaaa atgttaacgg cagaattagc caaaggtgca acacatcaaa actatattga
     7381 atttgatgat cgtgcagaag ggataaaaca tgcaattgac atagctgagc ctggggatac
     7441 tgtcgtttta gcatcaaaag gaagagaacc atatcaaatc atgccagggc atattaaggt
     7501 gccacatcga gatgatttaa ttggccttga agcagcttac aaaaagttcg gtggtggccc
     7561 tgttgattaa taaaagattt attgatgaag gtaaaactat tgatgtttat ttattcgaag
     7621 cattaaataa ccagataatc attgctatac cagattggtt ttggtcatat cagatggcaa
     7681 tgacattaga tgaagaaact tgttttgaag caatactcat gcaattgttt gtttttaaag
     7741 aagaggaaga ggcagaatcg attgcatcac aactaacaga ttggatagaa acatataaaa
     7801 aggagaaaga ctaatgaact taaagcaaga agttgagtct agaaagactt ttgcgattat
     7861 ttcacatccc gatgcaggga aaacaacgtt aactgaaaaa ctattgtact tcagtggtgc
     7921 tattcgtgaa gcgggtacag ttaaagggaa gaagactggt aaatttgcga caagtgactg
     7981 gatgaaagtt gaacaagagc gtggtatttc tgtaactagt tcagtaatgc aatttgatta
     8041 cgatgattat aaaatcaata tcttagatac accaggacat gaagactttt cagaagatac
     8101 gtatagaaca ttaatggcag ttgacagtgc tgtcatggtc atagactgtg caaaaggtat
     8161 tgaaccacaa acattgaagt tatttaaagt ttgtaaaatg cgtggtattc caatctttac
     8221 attcattaat aaattagacc gagtaggtaa agaaccattt gaattattag atgaaatcga
     8281 agagacatta aatattgaaa cataccctat gaattggcca attggtatgg gacaaagttt
     8341 ctttggcatc attgatagaa agtctaaaac aattgaacca tttagagatg aagaaaatat
     8401 attacatttg aatgatgatt ttgagttgga agaagatcat gcaattacaa atgatagtga
     8461 ttttgaacaa gcgattgaag aattaatgtt ggttgaagaa gcgggtgaag cctttgataa
     8521 tgacgcgctg ttgagtggag acttaacacc tgtatttttc ggttcagctt tagctaactt
     8581 tggtgtacaa aatttcttaa atgcatatgt tgattttgcg ccaatgccaa atgcgagaca
     8641 aacaaaagaa gacgttgaag taagcccgtt tgatgattca ttttcaggat ttatctttaa
     8701 aattcaagcc aacatggacc ctaaacaccg tgatagaatt gcctttatgc gtgtcgttag
     8761 tggtgcattt gaacgtggta tggatgttac tttgcaacgt actaataaaa agcaaaagat
     8821 cacacgttca acgtcattta tggcagacga taaagaaact gtgaatcatg ctgtagcagg
     8881 cgatatcatt ggactatatg atactggtaa ttatcaaatt ggagatactt tagttggtgg
     8941 aaaacaaacc tacagtttcc aagatttacc acaatttacg ccagaaattt ttatgaaagt
     9001 ttctgctaaa aacgtcatga aacagaagca tttccataaa ggtattgaac aattagtaca
     9061 agaaggtgcg attcaatact ataaaacatt acacacaaac caaattattt taggtgctgt
     9121 tggtcagtta caatttgaag ttttcgaaca tagaatgaaa aacgaatata atgttgatgt
     9181 tgttatggag ccagtaggcc gtaaaattgc acgttggatt gaaaatgaag accaaattac
     9241 agataagatg aacacatcaa gatcgatttt agtgaaagat agatatgacg atttagtatt
     9301 cttatttgaa aatgaatttg caacaagatg gtttgaagag aaattccctg aaattaaatt
     9361 gtatagttta ctttaacagc tcaattgtat aatcgaattt gttacattaa aaataattgt
     9421 ttcgttgaag aaaaataaat tgtatatttt aaaagaaaaa ggtatactat gatgtatcaa
     9481 atgaataacc tatggcattt tgtcagaggg gagtaactta agaatcatga ccgtataaat
     9541 gattcgacac tttatcgtca ttacgaagat atcttccggt aaagtgggca atttaaattg
     9601 cttagtgaga cctttgctat ttatttagca taggtctttt tgtttgtact taacttattt
     9661 atttaaagga gttgtacatg ttaatggatc caagtttgat cttaccttat ttatgggtac
     9721 ttgtcgtttt agtattttta gaaggcttat tagcagcaga taacgcgatt gttatggctg
     9781 taatggttaa gcacttacca cccgaacaac gtaaaaaagc tttgttttac ggtttgttag
     9841 gtgcatttgt atttagattt ttagcattat tcttaattag tattatcgcg aacttttggt
     9901 ttattcaagc tgcaggagcg gtttacttaa tttatatgtc aatcaaaaat ctgtggcagt
     9961 tctttaaaca cccagaaatt gaaagtcctg aagctggaga tgatcatcat tatgatgaat
    10021 ctggtgaaga gattaaagca agtaacaaat cattctgggg aactgtgttg aaaatagaat
    10081 ttgcagatat cgcatttgcc attgattcta tgcttgctgc tttagctatt gctgtaacac
    10141 ttcctaaagt tggtattcac tttggtggta tggacttagg tcagttcgta gtcatgttcc
    10201 taggtggaat gattggtgtt attctaatgc gttatgcagc aacatggttt gtagagctat
    10261 taaacaaata tccaggactt gaaggtgcag ccttcgcgat cgttggttgg gtaggtgtta
    10321 aattagttgt catggtatta gcgcacccag acatcgctgt attgcctgag cacttcccac
    10381 atggcgtatt atggcaatct attttctgga cagtactaat tggattagta attatcggtt
    10441 ggttaggttc agttgttaaa aataaaaaac cgcataaata attgatgtga agcggacaat
    10501 cttaatttag tttaaggttg tcctttttca tttaattgag tgatttatga aaaatggatt
    10561 ttgaagaatg tgaatcaaaa gatgcgatat agtattaaga aaatgtgcct tttatattta
    10621 gcattttttc aatagaaatt atatagattt taaagcaaat taggtgttaa tgtgtcataa
    10681 tgataagtga ttttattgaa tggagtggac attagtggat attggtaaaa aacatgtaat
    10741 tcctaaaagt cagtaccgac gtaagcgtcg tgaattcttc cacaacgaag acagagaaga
    10801 aaatttaaat caacatcaag ataaacaaaa tatagataat acaacatcaa aaaaagcaga
    10861 taagcaaata cataaagatt caattgataa gcacgaacgt tttaaaaata gtttatcatc
    10921 gcatttagaa cagagaaacc gtgatgttaa tgagaataaa gctgaagaaa gtaaaagtaa
    10981 tcaggatagt aagtcagcat ataacagaga tcattattta acagacgatg tatctaaaaa
    11041 acaaaattca ttagattcag tggaccaaga tacagagaaa tcaaaatatt atgagcaaaa
    11101 ttctgaagcg actttatcaa ctaaatcaac cgataaagta gaatcaactg aaatgagaaa
    11161 gctaagttca gataaaaaca aagttggtca tgaagagcaa catgtacttt ctaaaccttc
    11221 agaacatgat aaagagacta gaattgattc tgagtcttca agaactgatt cagacagctc
    11281 gatgcagaca gagaaaataa aaaaagacag ttcagatgga aataaaagta gtaatctgaa
    11341 atctgaagta atatcagaca aatcaaatac agtaccaaaa ttgtcggaat ctgatgatga
    11401 agtaaataat cagaagccat taactttacc ggaagaacag aaattgaaaa gacagcaaag
    11461 tcaaaatgag caaacaaaaa cctatacata tggtgatagc gaacaaaatg acaagtctaa
    11521 tcatgaaaat gatttaagtc atcatatacc atcgataagt gatgataaag ataacgtcat
    11581 gagagaaaat catattgttg acgataatcc tgataatgat atcaatacac catcattatc
    11641 aaaaacagat gacgatcgaa aacttgatga aaaaattcat gttgaagata aacataaaca
    11701 aaatgcagac tcgtctgaaa cggtgggata tcaaagtcag tcaactgcat ctcatcgtag
    11761 cactgaaaaa agaaatattt ctattaatga ccatgataaa ttaaacggtc aaaaaacaaa
    11821 tacaaagaca tcggcaaata ataatcaaaa aaaggctaca tcaaaattga acaaagggcg
    11881 cgctacgaat aataattata gtgacatttt gaaaaagttt tggatgatgt attggcctaa
    11941 attagttatt ctaatgggta ttattattct aattgttatt ttgaatgcca tttttaataa
    12001 tgtgaacaaa aatgatcgca tgaatgataa taatgatgca gatgctcaaa aatatacgac
    12061 aacgatgaaa aatgccaata acacagttaa atcggtcgtt acagttgaaa atgaaacatc
    12121 aaaagattca tcattaccta aagataaagc atctcaagac gaagtgggat caggtgttgt
    12181 atataaaaaa tctggagata cgttatatat tgttacgaat gcacacgttg tcggtgataa
    12241 agaaaatcaa aaaataactt tctcgaataa taaaagtgtt gttgggaaag tgcttggtaa
    12301 agataaatgg tcagatttag ctgttgttaa agcaacttct tcagacagtt cagtgaaaga
    12361 gatagctatt ggagattcaa ataatttagt gttaggagag ccaatattag tcgtaggtaa
    12421 tccacttggt gtagacttta aaggcactgt gacagaaggt attatttcag gtctgaacag
    12481 aaatgttcct attgatttcg ataaagataa taaatatgat atgttgatga aagctttcca
    12541 aattgatgca tcagtaaatc caggtaactc gggtggtgct gtcgtcaata gagaaggaaa
    12601 attaataggt gtagttgcag ctaaaattag tatgccaaac gttgaaaata tgtcatttgc
    12661 aatacctgtt aatgaagtac aaaagattgt aaaagattta gaaacaaaag gtaaaattga
    12721 ctatcccgat gtaggtgtta aaatgaagaa tattgccagt ctaaatagtt ttgaaagaca
    12781 agcagttaaa ttgccaggaa aagttaagaa cggtgttgtt gtagatcaag ttgacaacaa
    12841 tggtttagca gatcaatctg gtctgaaaaa aggtgatgta attactgaat tagatggcaa
    12901 acttttagaa gatgatttac gctttaggca gattatattt agtcataaag atgacttgaa
    12961 atcaattaca gcgaagattt atagagatgg taaagagaaa gaaattaata ttaaactaaa
    13021 ataatgttga ggtgaacaac gtgtcaattt ttagccagtt tttaaaaaga tcaagccctc
    13081 aacaaggtat tgtattgtac tatatcgtcg caattgtcat tgcattttta ttattaaact
    13141 taccgtatgt tcataaacca ggtgtagaag taaatccaat tgacacatta tttgttgccg
    13201 tatccggaat tagtgttact ggattgtctc cgataagtat tgtcgatacc tattctacat
    13261 ttggacaatt aattatcctc gtgatattaa atattggtgg aattggcgtc atggcaattg
    13321 gtacgatgtt atgggtggta ctaggtaaac atattggaat tagagaacgt cagttaatta
    13381 tgttagataa taacaaaaac acaatgagtg gtaccgtcaa attgattatt gatattgtaa
    13441 aatcaatatt tgtaatcgaa ctcgtaggag ccatgttatt agcattttac ttttatcgag
    13501 ataatccaga tttaaaatat gcaatcatgc aaggtgtttt tgtttctatt tctgccacta
    13561 ccaatggtgg attagatatt acaggtaagt cattaattcc ttatgcacat gattattttg
    13621 tacaagcgat agttatattt ttaataattt taggatcaat cggcttccca gtattattag
    13681 aagttaaagc ttatattcaa aatagggtta ctaattttag attttcatta tttactaaaa
    13741 ttacgacatc aacatattta ttcctattta ttgttggggt attagccatt ctattatttg
    13801 aacataacca tgcgttcaaa ggtttaagtt ggcatcaatc gttattctat tcgctgtttc
    13861 aatcagcgac tacaagaagt gcgggtcttc aaacaattga tgtgacaaca ctaagtgacc
    13921 ccactaatat tatcatgggt attttaatgt ttataggatc ttcgccaagt tcggttggtg
    13981 gcggtattcg tacaacaact ttcgctattt taattttgtt tttaattaac tttagtaata
    14041 atgccgataa aacatccatt aaagtttaca atagagaagt acacattatg gatattcaac
    14101 gttcatttgc agtatttaca atggcgacaa ttttaacatt tttaggaatg ctaattatat
    14161 cagctactga aaatggtaag cttacatttt tacaagtatt ttttgaagtc atgtctgcat
    14221 ttggaacttg tggactatcg cttggtgtca caagtgatat tagtgatatt tctaaggtcg
    14281 tactaatgat actcatgttt ataggacgtg ttggcttaat atcatttatc attatgatag
    14341 caggacgtcg agaaccagat aaattccatt atccaaaaga acgtattcaa ataggataat
    14401 ataatagcaa tctaagttta gttaatgtag attttaactg gaacttagat tgctttttta
    14461 gtttgtattt ttaacttatt ttataagacg attggtttcg aaaatggtaa actagtaaca
    14521 atgagaggtg taacatgatg gaaaaaaatg aaaacattaa tgtagagatt ttaactacgt
    14581 cagatatgca tagtcatttc ttaaatggtg attatggttc aaatatttat agagctggta
    14641 cttatgttaa ccaagtaaga gcacaaaatc atcgcgtcat tttattagat agtggcggaa
    14701 gtttagctgg ctcgttagcg gcctattatt atgctattgt tgcaccttat aaacgacatc
    14761 caatgataaa gttaatgaac agaatgcatt atgatgctag cggtgtgagt ccaagtgaat
    14821 tcaagtttgg tttatcattt ttaactcgtt caattgcttt ggcacgtttt ccatggttat
    14881 cagcaaatat tgaatacaat gttactaagg agccttattt ttcaactcca tattgtatta
    14941 aacattttgg tgacttaaaa attgctatcg taggcgtcac agcagatggt ttaatggaaa
    15001 atgagtattc tgaaatggag caagatgtat ctattgaaaa gacattagtg gcatcaaaac
    15061 gttggattag atatatccat gaagttgaag agccagattt tttgattgta atttatcatg
    15121 gtggattgaa taaaattagt aatagtacga aaaataaaaa ggcaagttcg aatgaagctg
    15181 aaaaattaat ggaagaactc ggtgttatag atttaatgat tacagctcat cagcatcaaa
    15241 caatagtagg tcaagatcat gaaacgtatt atgttcaggc tggtcaagat gccaaagagc
    15301 ttgtacatct ttcgattaat tttaaaaaga gaacaacaac ttatgatgtt gaaagcattg
    15361 attctaaagt gattgactta aatgagtatg aagaggatca agaattatta gatttaacat
    15421 tctatgatag aaaagcagtg gcttattggt cacaggaaat cataagtgat aaaggtttga
    15481 tgttatcagt aaatgggtta caagatttag tctgtcaaac acatccattt tcgcaattat
    15541 tacatgatgc aattcacctt gcatttgata atgatataac atgtgtccac gtgcctatga
    15601 acggagagaa ggggttgagt ggacagattc gaaatgaaga tttgtatcat gcatacccat
    15661 atccagataa gccaatggat atgacaatta gtggtcaaaa tatcaaagat atattggagt
    15721 atagttattc acatttagat tttgttaacg agcaattaag cttaacaatt attgatgaaa
    15781 cgttatgtac aatgtggcaa ggattcaatt atgagattga tatgaatcaa gaacctgggc
    15841 aacgagtaat gttagatcaa attgatttga ctaagagtta tagagttaca atgactgact
    15901 attgttatcg taactacaag aattatttaa aaaatgctat tatacatgaa tcatacgatg
    15961 aaacaatgag tacattaatt gcagagaagt taagagatcc gaattatcgt atttcatgta
    16021 gtgataattt tatagttaaa aacaggtaa
//
LOCUS       DALPQQ010000055        16040 bp    DNA     linear   BCT 22-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus strain K18-6-464
            SAMD00233528-rid16434743.denovo.055, whole genome shotgun sequence.
ACCESSION   DALPQQ010000055 DALPQQ010000000
VERSION     DALPQQ010000055.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMD00233528
            Sequence Read Archive: DRR236061
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 16040)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 16040)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001543423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001543423.1
            Genome Coverage       :: 77x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/22/2022 17:09:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,811
            CDSs (total)                      :: 2,743
            Genes (coding)                    :: 2,689
            CDSs (with protein)               :: 2,689
            Genes (RNA)                       :: 68
            rRNAs                             :: 2, 4, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 4, 2 (16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 54
            CDSs (without protein)            :: 54
            Pseudo Genes (ambiguous residues) :: 0 of 54
            Pseudo Genes (frameshifted)       :: 27 of 54
            Pseudo Genes (incomplete)         :: 27 of 54
            Pseudo Genes (internal stop)      :: 10 of 54
            Pseudo Genes (multiple problems)  :: 10 of 54
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..16040
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMD00233528-rid16434743.denovo.055"
                     /strain="K18-6-464"
                     /db_xref="taxon:1280"
                     /geo_loc_name="Japan: Niigata"
     gene            17..928
                     /locus_tag="O7798_001434"
     CDS             17..928
                     /locus_tag="O7798_001434"
                     /EC_number="2.5.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499612.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protoheme IX farnesyltransferase"
                     /protein_id="HDC2863698.1"
                     /translation="MSKEHTLSQNISRVNFKELQQIIKMGLVQGNLIPAFAGAWLAVV
                     MTNHSFLSSIPQILLMLFGSTLIMGGACALNNYYDQDIDRIMPSKQNRPTVNNRITDQ
                     NLLLLSFGMMLVGEICLFLLNIPSGVLGLMGIVGYVSYYSIWSKRHTTWNTVIGSFPG
                     AVPPLIGWVAIEGQISLTAIALFLVVFCWQPIHFYALAIKRKDEYALANIPMLPSVKG
                     FKRTRVSMFIWLIILLPVPLLLINLGVVFVVLATLLNLGWIALGLTTFKKNSDQTKWA
                     TQMFIYSLNYLVIFFVLAVIVSLLTLI"
     gene            953..1414
                     /locus_tag="O7798_001435"
     CDS             953..1414
                     /locus_tag="O7798_001435"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499613.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF420 domain-containing protein"
                     /protein_id="HDC2863699.1"
                     /translation="MGVPILPTISTTCIVISAILIAIGWRLIWKREINKHKNVMLAAA
                     VFALTFFLIYANRTIFIGNTAFGGPASIKKYYTIFLFFHINLATIGGILGLVQIITAF
                     KDKYNVHRKFGPFASVIWFCTAITGVAVYLLLYVLYPGGETTSLIKATFGH"
     gene            1741..2778
                     /locus_tag="O7798_001436"
     CDS             1741..2778
                     /locus_tag="O7798_001436"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499615.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CAP domain-containing protein"
                     /protein_id="HDC2863700.1"
                     /translation="MKKLIIRVVGVLFLVGFLIYLFYSPRLKFDVLENPNKGNKVNRS
                     EQVNKSNNHAENPKPKEGVGTWVGKDIKVLTSKFGQADRVYPFRDGYKNYVFKDKNSY
                     YIVSTKREEIVSVYATGEKVNVSPLKIGQHSAEIFNHTSINPEPSFKVDGKKYEFELS
                     DEDLKTQTLIKYGDIYAQVYSDQQSKKVLSVRFLTKEMLADIEPYQLNSNSTSEEHNK
                     RPVEQNPNQLISLYEVTNEMRKLKGLKPLKINSDLAHIASNNLYEATSNGSDSVEFTE
                     DALRGQLDKNHVTYKTTAQNVGYAFNDVPTLIHSWMNSDIHRSRLLNSKYDEMGGDVM
                     RDYYSLIFLEK"
     gene            2794..3228
                     /locus_tag="O7798_001437"
     CDS             2794..3228
                     /locus_tag="O7798_001437"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499616.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YlbF family regulator"
                     /protein_id="HDC2863701.1"
                     /translation="MINEASLAILDDIDELADMIVASDIYASFEQAKQALENNDEAHL
                     LYQSFLKSKEKYDEVMRFGKYHPDYKKVMLETRQRKRAYEMLDVVMHYKAREMALQHL
                     IDEVVTKIAYAVSEHVKIETGNPFFQTSHSGCATGGSCNCSL"
     gene            complement(3291..4217)
                     /locus_tag="O7798_001438"
     CDS             complement(3291..4217)
                     /locus_tag="O7798_001438"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499617.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycerophosphodiester phosphodiesterase"
                     /protein_id="HDC2863702.1"
                     /translation="MKKVNRNILNAVLVGAGFLSSLLMINKNKVITKKQTIPAFFKGN
                     APYIFAHRGGMALRPEQTQLAFDYAKQLGVDGFETDVRLTKDQQLIVFHDATVDRTTN
                     GSGKVSAHTLAELKKLDAAYHFKDINGLTPYRGHAHTAILTFDELLKQYPDMYINVDL
                     KDAPESYEGSIAPQIMFDTIAENQAFDRVLVTSFYKEQIVRFNKIAQGSVAIGASQQE
                     VTEAFLKYHLLGGRYYQPLAQTFQMPTHFKGIDLTSSRFIKWLNDMNIIPGYYGVNSI
                     NLMNDLYQKGAHTIVTDRPDLAQQFKQTIPNK"
     gene            4456..4710
                     /locus_tag="O7798_001439"
     CDS             4456..4710
                     /locus_tag="O7798_001439"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499618.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YlbG family protein"
                     /protein_id="HDC2863703.1"
                     /translation="MNLIPRTSIVVYLKHMKHERQIRKYGHIVHSNRDRKFVIMYVNE
                     QDVDQIVHKLMQLKYVRHIDGSPYKYLKKTYEKEKHEIYN"
     gene            complement(4713..5102)
                     /locus_tag="O7798_001440"
     CDS             complement(4713..5102)
                     /locus_tag="O7798_001440"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499619.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDC2863704.1"
                     /translation="MKQTFITLGEGLTDLFEFMTMIEYNHQRIDKIIYFHSPQAENKK
                     SSVAIIMNPTTGNHFQAFYIMINAIKYPYPDSNKKFQMINDCAEKFDIPILGIDVQPP
                     QAFHDLSLYYNYLISVLRLQKWIPELQ"
     gene            5172..5714
                     /gene="rsmD"
                     /locus_tag="O7798_001441"
     CDS             5172..5714
                     /gene="rsmD"
                     /locus_tag="O7798_001441"
                     /EC_number="2.1.1.171"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002470236.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA (guanine(966)-N(2))-methyltransferase
                     RsmD"
                     /protein_id="HDC2863705.1"
                     /translation="MRVIAGKHKSKALESMEGRNTRPTMDKVKEGIFNSLYDVSGIGL
                     DLFAGSGALGIEALSRGMDKVIFVDQNFKAVKVIKSNLANLDLEAQSEVYKNNADRAL
                     KALSKRDIQFDVIFLDPPYNKGLIDKALKLISEFNLLKENGIIVCEFSNHEEIDYQPF
                     NMIKRYHYGLTDTLLLEKGE"
     gene            5716..6198
                     /gene="coaD"
                     /locus_tag="O7798_001442"
     CDS             5716..6198
                     /gene="coaD"
                     /locus_tag="O7798_001442"
                     /EC_number="2.7.7.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499621.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pantetheine-phosphate adenylyltransferase"
                     /protein_id="HDC2863706.1"
                     /translation="MEHTIAVIPGSFDPITYGHLDIIERSTDRFDEIHVCVLKNSKKE
                     GTFSLEERMDLIEQSVKHLPNVKVHQFSGLLVDYCEQVGAKTIIRGLRAVSDFEYELR
                     LTSMNKKLNNEIETLYMMSSTNYSFISSSIVKEVAAYRADISEFVPPYVEKALKKKFK
                     "
     gene            complement(6260..7399)
                     /locus_tag="O7798_001443"
     CDS             complement(6260..7399)
                     /locus_tag="O7798_001443"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499622.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleotidyltransferase"
                     /protein_id="HDC2863707.1"
                     /translation="MKSVGLITEYNPFHNGHQYHINQSKKLTNADVTIAIMSGNFVMR
                     GEPAIYNKFTRAKMALSTADLVIELPATASLSSGDHFAELAVKVADYMSVDTIAFGSE
                     NNDIKTLKQLAHSINEIEQSESFSQKVKEGKSYPRIISELLEHHEALASPNNILGISY
                     LKAIAKNAKNINAISIKRENAQHHDSLIQHHQFASGTSIRTSIISQDDHWHHVVPKDI
                     QHLYVTPHITLNQIFPYLKYQIIAMTTDSLKNIYTVTEGFENRLKSNIYEATDFHHFV
                     KLLKTKRYTYTHIQRLLMNVLLNIKPTDVTSNIHAVKVLAMNDRGRQYLKHLKTAFPE
                     RQYITNINKSNAHYFTNEIKATHIYNAISGQQQTDFNTPVIQQYR"
     gene            7526..8083
                     /locus_tag="O7798_001444"
     CDS             7526..8083
                     /locus_tag="O7798_001444"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499623.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF177 domain-containing protein"
                     /protein_id="HDC2863708.1"
                     /translation="MKWSITQLRKYQGKPFEFDQTVSFDNLKESLDLIDLSPITIQGQ
                     LTIKSTEVVADIHITGTYTMPCARTLVPVKVPLDVTTTEVFDLEGYNQYNDDQDDVDE
                     HYHIIKDGMVNLQDIVEDIVIIEKPMRAYSEQSDQMLTVGNGWEVIDEDQLDELAKQQ
                     EQDDSESRQVDPRLQKLQQLYDKEQ"
     gene            8163..8336
                     /gene="rpmF"
                     /locus_tag="O7798_001445"
     CDS             8163..8336
                     /gene="rpmF"
                     /locus_tag="O7798_001445"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019469283.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L32"
                     /protein_id="HDC2863709.1"
                     /translation="MAVPKRRTSKTRKNKRRTHFKISVPGMTECPNCGEYKLSHRVCK
                     NCGSYNGEEVAAK"
     gene            complement(8490..10427)
                     /gene="isdB"
                     /locus_tag="O7798_001446"
     CDS             complement(8490..10427)
                     /gene="isdB"
                     /locus_tag="O7798_001446"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499626.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heme uptake protein IsdB"
                     /protein_id="HDC2863710.1"
                     /translation="MNKQQKEFKSFYSIRKSSLGVASVAISTLLLLMSNGEAQAAAEE
                     TGGTNTEAQPKTEAVASPTTTSEKAPETKPVANAVSVSNKEVEAPTSETKEAKEVKEV
                     KAPKETKEVKPAAKATNNTYPILNQELREAIKNPAIKDKDHSAPNSRPIDFEMKKKDG
                     TQQFYHYASSVKPARVIFTDSKPEIELGLQSGQFWRKFEVYEGDKKLPIKLVSYDTVK
                     DYAYIRFSVSNGTKAVKIVSSTHFNNKEEKYDYTLMEFAQPIYNSADKFKTEEDYKAE
                     KLLAPYKKAKTLERQVYELNKIQDKLPEKLKAEYKKKLEDTKKALDEQVKSAITEFQN
                     VQPTNEKMTDLQDTKYVVYESVENNESMMDTFVKHPIKTGMLNGKKYMVMETTNDDYW
                     KDFMVEGQRVRTISKDAKNNTRTIIFPYVEGKTLYDAIVKVHVKTIDYDGQYHVRIVD
                     KEAFTKANTDKSNKKEQQDNSAKKEATPATPSKPTPSPVEKESQKQDSQKDDNKQLPS
                     VEKENDASSESGKDKTPATKPTKGEVESSSTTPTKVVSTTQNVAKPTTASSKTTKDVV
                     QTSAGSSEAKDSAPLQKANIKNTNDGHTQSQNNKNTQENKAKSLPQTGEESNKDMTLP
                     LMALLALSSIVAFVLPRKRKN"
     gene            complement(10630..11682)
                     /gene="isdA"
                     /locus_tag="O7798_001447"
     CDS             complement(10630..11682)
                     /gene="isdA"
                     /locus_tag="O7798_001447"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499627.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LPXTG-anchored heme-scavenging protein IsdA"
                     /protein_id="HDC2863711.1"
                     /translation="MTKHYLNSKYQSEQRSSAMKKITMGTASIILGSLVYIGADSQQV
                     NAATEATNATNNQSTQVSQATSQPINFQVQKDGSSEKSHMDDYMQHPGKVIKQNNKYY
                     FQTVLNNASFWKEYKFYNANNQELATTVVNDNKKADTRTINVAVEPGYKSLTTKVHIV
                     VPQINYNHRYTTHLEFEKAIPTLADAAKPNNVKPVQPKPAQPKTPTEQTKPVQPKVEK
                     VKPTVTTTSKVEDNHSTKVVSTDTTKDQTKTQTAHTVKTAQTAQEQNKVQTPVKDVAT
                     AKSESNNQAVSDNKSQQTNKVTKHNETPKQASKAKELPKTGLTSVDNFISTVAFATLA
                     LLGSLSLLLFKRKESK"
     gene            11891..12574
                     /gene="isdC"
                     /locus_tag="O7798_001448"
     CDS             11891..12574
                     /gene="isdC"
                     /locus_tag="O7798_001448"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499628.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heme uptake protein IsdC"
                     /protein_id="HDC2863712.1"
                     /translation="MKNILKVFNTTILALIIIIATFSNSANAADSGTLNYEVYKYNTN
                     DTSIANDYFNKPAKYIKKNGKLYVQITVNHSHWITGMSIEGHKENIISKNTAKDERTS
                     EFEVSKLNGKIDGKIDVYIDEKVNGKPFKYDHHYNITYKFNGPTDVAGANAPGKDDKN
                     SASGSDKGSDGTTTGQSESNSSNKDKVENPQTNAGTPAYIYAIPVASLALLIAITLFV
                     RKKSKGNVE"
     gene            12574..13650
                     /gene="isdD"
                     /locus_tag="O7798_001449"
     CDS             12574..13650
                     /gene="isdD"
                     /locus_tag="O7798_001449"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499629.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron-regulated surface determinant protein IsdD"
                     /protein_id="HDC2863713.1"
                     /translation="MRNVKQIATKSIIAIISLGILTCTTMIGSVLADEIKYPSAKFNQ
                     PEAKDKTELTTSIFDEKIKENKALELLIFNQENKNVTEEQQLVDEKAQLISDMTGKIY
                     LQVKLKGQIDKEQLVFQNDKNEEFPFVIKDEKDDTIVRILIEQHMDKINMHVKTLAEK
                     KNLDNKEMVYSIHFKEKKVQHDDAKEVPSKHQNQENNQDQLKKDIDDKKDSQKSDTKE
                     RRTSLFTEKGLNDIPVQKDKVQQDSNKKIENERPKASGTLKVENSPPTIKKVENNHKE
                     QPKHKDEKSKKEKKKVVEKEKALPAFNRDDDSKNSSQLSSDIKELDEPNHKKQYMLFA
                     AGIVLATILLISAHLYSRKRGNQV"
     gene            13647..14525
                     /gene="isdE"
                     /locus_tag="O7798_001450"
     CDS             13647..14525
                     /gene="isdE"
                     /locus_tag="O7798_001450"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006190048.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heme ABC transporter substrate-binding protein
                     IsdE"
                     /protein_id="HDC2863714.1"
                     /translation="MRIIKYLTILVISVVILTSCQSSSSQESTKSGEFRIVPTTVALT
                     MTLDKLDLPIVGKPTSYKTLPNRYKDVPEIGQPMEPNVEAVKKLKPTHVLSVSTIKDE
                     MQPFYKQLNMKGYFYDFDSLKGMQKSITQLGDQFNRKAQAKELNDHLNSVKQKIENKA
                     AKQKKHPKVLILMGVPGSYLVATDKSYIGDLVKIAGGENVIKVKDRQYISSNTENLLN
                     INPDIILRLPHGMPEEVKKMFQKEFKQNDIWKHFKAVKNNHVYDLEEVPFGITANVDA
                     DKAMTQLYDLFYKDKK"
     gene            14538..15503
                     /gene="isdF"
                     /locus_tag="O7798_001451"
     CDS             14538..15503
                     /gene="isdF"
                     /locus_tag="O7798_001451"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000594537.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hemin ABC transporter permease protein IsdF"
                     /protein_id="HDC2863715.1"
                     /translation="MIKNKKKLLFLCLLVILIATAYISFVTGTIKLSFNDLFTKFTTG
                     SNEAVDSIIDLRLPRILIALMVGAMLAVSGALLQAALQNPLAEANIIGVSSGALIMRA
                     LCMLFIPQLYFYLPLLSFIGGLIPFLIIILLHSKFRFNAVSMILVGVALFVLLNGVLE
                     ILTQNPLMKIPQGLTMKIWSDVYILAVSALLGLILTLLLSPKLNLLNLDDIQARSIGF
                     NIDRYRWLTGLLAVFLASATVAIVGQLAFLGIIVPHVVRKLVGGNYRVLIPFSTVIGA
                     WLLLVADLLGRVIQPPLEIPANAILMIVGGPMLIYLICQSQRNRI"
     gene            15565..>16040
                     /gene="srtB"
                     /locus_tag="O7798_001452"
     CDS             15565..>16040
                     /gene="srtB"
                     /locus_tag="O7798_001452"
                     /EC_number="3.4.22.71"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499633.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class B sortase"
                     /protein_id="HDC2863716.1"
                     /translation="MRMKRFLTIVQILLVVIIIIFGYKIVQTYIEDKQERANYEKLQQ
                     KFQMLMSKHQEHVRPQFESLEKINKDIVGWIKLSGTSLNYPVLQGKTNHDYLNLDFER
                     EHRRKGSIFMDFRNELKNLNHNTILYGHHVGDNTMFDVLEDYLKQSFYEKHKIIEF"
BASE COUNT         5391 a         2194 c         2832 g         5623 t
ORIGIN      
        1 tttaaggagg gggattatga gcaaagagca tactttgtca caaaatatta gcagagttaa
       61 cttcaaagaa ttgcaacaga taattaaaat gggacttgtt caaggtaact taattccggc
      121 ttttgcgggc gcatggctag cagttgtaat gacaaatcat tccttcttat catcaatacc
      181 tcaaatttta ttaatgctat ttggatctac tttaattatg ggtggcgcat gtgcgttaaa
      241 taattattac gaccaagata ttgatcgtat tatgcctagt aaacaaaata gaccaactgt
      301 aaataataga attacagatc aaaatttatt actattaagt tttggtatga tgttagttgg
      361 agaaatttgt ttgtttttat tgaatatacc atcaggcgta cttggtctta tggggattgt
      421 aggttatgtg tcttattact caatatggtc taaaagacat acaacatgga acacagtgat
      481 tgggagtttt cctggagcag taccaccact aattggatgg gttgcaattg aaggacaaat
      541 tagtttaaca gcgattgcgc tgtttttagt tgtattttgt tggcaaccaa ttcattttta
      601 tgccttagct attaaacgta aagatgaata tgcacttgca aatattccaa tgttaccatc
      661 agttaagggc tttaaacgta cacgtgtcag tatgtttatc tggttgatta ttttattgcc
      721 agtaccttta ttactaataa atttaggtgt cgtattcgta gtgttagcta cattattaaa
      781 tttaggatgg attgcattag gtttaacaac atttaagaaa aattcagatc aaacaaaatg
      841 ggcaacacaa atgtttatat attcactaaa ttatttagtg atctttttcg tgttagctgt
      901 gattgtttca ttacttactt tgatctagat taattaagtt aggatgaaaa atatgggcgt
      961 tccaatttta ccaacgatta gtacgacatg tattgtcatt agtgcaattt taattgccat
     1021 tggttggaga cttatttgga aaagggaaat aaataaacac aaaaatgtta tgttagctgc
     1081 agctgttttt gctttaactt ttttcttaat ctatgcaaat agaacgattt ttatcggtaa
     1141 tacagcattt ggcggaccag catcaattaa gaaatattat acgattttct tatttttcca
     1201 cattaattta gcaacaattg gtggtattct aggcctagtt caaattatta ctgcatttaa
     1261 agataaatat aatgtacacc gcaaattcgg gccattcgct tcagttatat ggttctgtac
     1321 tgcaattaca ggtgtagcag tttacttatt attatatgta ttatatccag gtggagaaac
     1381 gacatcactg attaaagcaa catttggtca ttaatatgct tatacaaatg atactaatct
     1441 gataaggcaa tttgttttat caggtttttt gatgaagaat agtcggacag ttgatggtat
     1501 tcatttgata ccttaactgt ccattttttt atacatattt taatcttaat aatgaaattc
     1561 aacctgaaaa cataaagata ggttatgata tagagtgtag ggaaaatctt tatgacgtta
     1621 aaattatgcc tgaagatgat tttgttttat cgaaacgaca cagttatgtc agtgttgaaa
     1681 atttgctaat taatgtgttg ttttttacaa tagtattaat actttttagg tggttgattg
     1741 atgaaaaagt taattataag agtcgtcggt gtattatttt tagttggatt tttaatatat
     1801 cttttttatt caccgagatt aaaatttgat gtattagaga acccgaataa aggtaataaa
     1861 gtaaatagat ctgaacaggt gaataaatca aataaccatg ctgaaaatcc aaagcctaaa
     1921 gaaggtgttg gtacatgggt aggtaaagat attaaagtgc ttacttctaa atttggacaa
     1981 gcagatcgtg tctacccttt tagagatggt tacaaaaatt atgtgtttaa agacaaaaac
     2041 agttattaca ttgtttcaac taaacgtgaa gaaatcgttt cagtgtatgc tacaggtgag
     2101 aaagtcaatg ttagtccgtt aaaaatagga caacattctg cagaaatttt taatcataca
     2161 agtattaatc cagaaccgtc ctttaaagtt gatggtaaaa aatatgaatt tgaactttca
     2221 gatgaagatt taaaaacaca aacactgatt aaatatggcg acatatatgc acaagtgtat
     2281 tctgatcaac aatcgaaaaa ggtgctaagt gtacgatttt taacaaaaga aatgttagca
     2341 gatattgaac cttatcaatt aaattctaat tctacgtcag aagagcataa taagcgtcca
     2401 gttgagcaaa atccaaatca attaatttct ctttatgaag taacgaatga aatgagaaaa
     2461 ttaaaaggat taaaaccatt gaaaatcaat agcgatttag cacatattgc atctaataac
     2521 ttatatgaag cgacctctaa tggttctgat agtgttgaat ttacagagga cgcattaaga
     2581 gggcaattag ataaaaatca cgttacttat aaaacaactg ctcaaaatgt tggttatgcg
     2641 tttaatgatg taccaacatt aatccatagt tggatgaatt cagatataca tcgatctcgt
     2701 ctattaaatt caaaatacga tgagatgggt ggagatgtaa tgagagatta ttattcacta
     2761 attttcttag aaaaataaca atgaggggta tttatgatta atgaagcttc actagcgata
     2821 ttagatgata ttgatgaact agctgatatg atagttgcat cagatattta tgcatcattt
     2881 gagcaagcta aacaggcgct cgaaaacaat gacgaagcac atttacttta tcaatcattt
     2941 ttaaaatcaa aagagaaata tgatgaagta atgcgattcg ggaaatatca tcctgattat
     3001 aagaaagtta tgttagagac aagacaacgc aaaagagcat atgagatgct tgacgttgtg
     3061 atgcattaca aagctaggga aatggcactt caacatttaa tagatgaagt tgttacgaaa
     3121 attgcgtacg ctgtttcaga acatgtcaaa atagaaacag gtaatccatt ctttcaaaca
     3181 tcacatagtg gttgtgcgac gggcggatcc tgtaattgtt cattataaaa aacatcgagt
     3241 cagaaaaagg tggttattga aaccactaac tagcatctga ctcgatgttt ttatttattc
     3301 gggattgttt gtttgaattg ttgtgctaaa tctggtcgat ctgtcacaat cgtgtgtgca
     3361 cctttttggt ataaatcatt catcagattt atactattta cgccataata gcctggaatg
     3421 atattcatat catttaacca tttgataaaa cgagatgaag tcaaatcaat gcctttaaaa
     3481 tgagtaggca tttggaacgt ttgtgctaat ggttggtagt acctaccacc taataaatga
     3541 tattttaaaa atgcttctgt aacttcctgt tggctagcac caattgcgac ggatccttgt
     3601 gcaattttat taaaacgaac gatttgttct ttataaaaac ttgtcacaag aacgcggtca
     3661 aatgcttgat tttctgcaat tgtatcaaac ataatttgtg gtgcgattga gccttcatag
     3721 gattcaggag catcttttaa gtctacgttt atatacatat caggatattg cttcagcaac
     3781 tcatcgaagg ttagtatagc tgtgtgtgca tgaccacgat atggtgttag tccattgata
     3841 tctttgaagt gataagctgc gtctaatttc tttaattctg ctaatgtatg ggcactaact
     3901 tttccagagc cgttcgtcgt tctatcaaca gttgcgtcat gaaaaacgat aagctgttga
     3961 tcttttgtga gtctcacatc tgtttcaaag ccatcaacgc ctaattgttt agcatagtca
     4021 aatgcaagtt gcgtttgctc tggtcttaaa gccataccac cgcgatgcgc aaatatatat
     4081 ggtgcattgc ctttgaaaaa agcagggatg gtttgctttt tagtaatcac tttattttta
     4141 ttgatcatta atagactact taaaaatcca gcaccgacta gtaccgcatt taaaatgttt
     4201 ctgtttactt ttttcataaa aaattcctcc tcgtttactt ttatagctta acaaattcat
     4261 agttctgact acagcgaaat gtgtggttaa tcatatagtg atgctcttga gaattgaatt
     4321 aatataatga tgtttaatat aatctaaata catttatcga gcaattacat aagacataat
     4381 taaggtagct taatatttta aaattaataa agacatgata tgattaatgc tgaaaataaa
     4441 tggagtgagg tttaaatgaa tttaatccca agaactagta ttgtagttta tttaaaacat
     4501 atgaaacatg aacgacaaat ccgaaaatat ggacatatcg ttcattcaaa tagagatcgt
     4561 aaatttgtaa ttatgtatgt gaatgagcaa gatgttgatc aaattgtaca taaactaatg
     4621 caacttaaat acgttagaca cattgatggc tcaccatata aatacttaaa gaaaacttac
     4681 gaaaaagaga aacacgaaat atataattaa tattattgaa gttctggtat ccatttttgg
     4741 agccttaaca cactaattaa ataattataa tataacgata aatcatgaaa tgcttgaggg
     4801 ggctgtacat cgatacctaa aattggtatg tcgaattttt cagcacaatc atttatcatt
     4861 tgaaactttt tatttgaatc tggatatgga tatttaatag cgtttatcat gatataaaat
     4921 gcttggaaat gattgccagt tgtagggttc ataatgattg ctacagatga ctttttattt
     4981 tcagcttgtg gtgaatgaaa atagataatt ttatcaatac gttgatggtt atattcaatc
     5041 atcgtcatga attcgaacaa atctgttaga ccttcaccaa gtgtaataaa tgtttgtttc
     5101 attggtttat cattctcctt tttctcaata aattatatta aataactaaa tgaattggaa
     5161 gtgtgaacaa catgcgcgtc attgcaggta aacataaaag taaagcttta gaaagtatgg
     5221 aaggccgtaa tacgagacca actatggata aagttaaaga aggtatcttt aatagtttat
     5281 atgatgtgtc aggtataggt ttagatttat ttgcaggaag cggggcgctt ggaatagaag
     5341 cactctctcg aggtatggat aaggtaatct ttgttgatca aaattttaaa gctgtaaaag
     5401 ttattaaatc aaatcttgcg aatttggatt tagaggcaca atctgaagtt tataaaaata
     5461 atgcagatag agctttaaaa gcattgtcaa aacgtgatat tcaatttgat gtcattttct
     5521 tagatccacc ttataataaa ggtctcattg ataaagcttt aaaactaatt tcagagttta
     5581 atttattgaa agaaaatggt atcatcgttt gtgaatttag caatcatgaa gaaatagatt
     5641 atcaaccgtt taatatgatt aaacgttacc attatgggtt gacagacaca ttgttattag
     5701 aaaagggaga atagcatgga acatacaata gcggtcattc cgggtagttt tgaccccatt
     5761 acttatggtc atttagacat tattgagaga agtacagata gatttgatga aattcatgtc
     5821 tgtgttctta aaaatagtaa aaaagaaggt acgtttagtt tagaagagcg tatggattta
     5881 attgaacaat ctgttaaaca tttacctaat gtcaaggttc atcaatttag tggtttacta
     5941 gtcgattatt gtgaacaagt aggagctaaa acaatcatac gtggtttaag agcagtcagt
     6001 gattttgaat atgaattacg cttaacttca atgaataaaa agttgaacaa tgaaattgaa
     6061 acgttatata tgatgtctag tactaattat tcatttataa gttcaagtat tgttaaagaa
     6121 gttgcagctt atcgagcaga tatttctgaa ttcgttccac cttatgttga aaaggcattg
     6181 aagaagaaat ttaagtaata aaaataacag tattttaggt ttatcatggt ttacaatcct
     6241 aaaatactgt tttcatttgt taacgatatt gctgtatgac aggcgtgttg aaatctgttt
     6301 gttgttgccc gcttattgca ttgtatatgt gtgttgcttt gatttcattt gtgaagtaat
     6361 gtgcattgct tttgttaata ttggttatat attgtctttc tgggaacgct gtttttaaat
     6421 gctttaaata ttgtctgcca cggtcgttca tcgctaatac tttaactgcg tgaatgttac
     6481 tcgtaacatc tgtaggttta atgtttaata atacattcat taacagtctt tggatatgcg
     6541 tatatgtata acgctttgtt tttagtaatt ttacaaaatg atgaaaatca gttgcttcat
     6601 aaatgttaga tttcaaacga ttttcaaaac cttcagtaac agtataaata ttttttaatg
     6661 aatctgtagt catagctatg atttgatatt tcaaatatgg aaatatttga tttaatgtta
     6721 tatgaggtgt tacgtacaag tgttgaatat ctttaggtac cacatgatgc caatgatcat
     6781 cttgactaat gattgatgtt ctaatagatg taccacttgc aaactgatgg tgttgaatta
     6841 atgaatcatg atgttgagca ttttctcgtt tgatagaaat tgcattgatg tttttagcat
     6901 ttttagcaat tgctttcagg taactaatac caagtatgtt gttaggactt gctagtgctt
     6961 catgatgctc taataattcg ctaatgatac gagggtagct tttaccttct tttacttttt
     7021 gtgaaaagga ttcagattgt tcaatttcat taatgctgtg tgctaattgc tttaatgttt
     7081 tgatatcatt attttcacta ccaaatgcaa ttgtatcgac actcatataa tctgcgactt
     7141 taactgctag ttcggcaaaa tgatcgccag atgataaact ggcagttgct ggtagttcga
     7201 taactaaatc agctgttgat aatgccattt ttgcacgagt aaacttatta tagattgctg
     7261 gttcgccacg catgacaaag ttaccactca ttattgcaat agtaacgtca gcatttgtaa
     7321 gttttttaga ttgattaata tgatattgat gcccattatg aaagggatta tattctgtga
     7381 ttaagccaac gcttttcatt tgcaattcgt cctttcggta ttcattatta atattgtaac
     7441 agaacatgat atgttaagaa aaaatcttga caacttgttc ttagaaagtt aaaataaatt
     7501 ttgtgcttgt tagaggtgaa gccatatgaa atggtcaatt acgcaattaa ggaaatatca
     7561 aggtaagcca tttgaatttg atcaaacggt gagttttgac aatttaaaag aatcattaga
     7621 tttaattgat ttatctccaa ttacaatcca aggtcagtta accattaagt caacagaagt
     7681 cgttgcggat attcacatta ctggaacgta tacaatgcct tgtgcacgta ctcttgtacc
     7741 agtaaaagtc ccactagatg taactactac agaagtattt gatttagaag ggtacaatca
     7801 gtataacgat gatcaagatg atgtagatga acactatcac attattaaag atggtatggt
     7861 taatcttcag gatattgtcg aggatatagt tattattgag aaaccaatga gagcttattc
     7921 agagcaaagt gaccaaatgt tgacagtagg taatggttgg gaagtaatcg atgaggatca
     7981 attagatgag cttgctaaac agcaagaaca agatgattca gaatcacgac aagttgatcc
     8041 aaggcttcaa aaattacaac aattatatga taaagagcaa taagtagttt aattaatgat
     8101 ataatgttgt taattaaact aacatttagt atttttcgtt tataatctaa ggaggatata
     8161 tcatggcagt accaaaaaga agaacttcta aaactagaaa aaacaaacgt cgtacgcatt
     8221 tcaaaatttc agtaccaggt atgactgaat gcccaaactg tggcgaatac aaattatcac
     8281 accgtgtatg taaaaactgt ggttcttaca atggcgaaga agtagcagct aaataatttt
     8341 agttactcaa tataaaaagt cccgcttaaa atgattgttt taagtgggac tttttatatt
     8401 gcgaaaaata attggcgaac gaggtaactg gatacctcat ccgccaatta aaatttgtta
     8461 atttaataat taaatataaa gacgatttat tagtttttac gttttctagg taatacgaat
     8521 gcaacgatgc tacttaaagc taataatgcc attaatggta atgtcatatc tttatttgat
     8581 tcttcaccag tttgtggtaa tgattttgct ttattttctt gtgtattttt attgttttgg
     8641 ctttgagtgt gtccatcatt tgtgttttta atgtttgctt tttgtaatgg agcactatct
     8701 tttgcttcgc tagaacctgc tgaagtttga acaacatctt ttgttgtttt tgatgaagca
     8761 gttgttggtt ttgcaacatt ttgagtcgta gatactacct tagttggagt tgtactactt
     8821 gattctactt cacctttagt tggttttgta gcaggcgttt tgtctttacc tgactcacta
     8881 gatgcgtcat tttctttttc aacacttggt aattgtttat tgtcatcttt ttggctgtct
     8941 tgtttttgtg attctttttc aacaggtgat ggtgttggtt tgctaggcgt agctggagta
     9001 gcttccttct tagctgagtt atcttgttgt tcttttttgt tagatttatc ggtattggct
     9061 tttgtaaatg cttctttatc aacgattctg acatggtatt gtccatcata atcaatcgtt
     9121 tttacgtgaa ctttaacgat agcatcatat agagttttac cttcaacata tgggaaaata
     9181 attgttctag tattattttt agcatctttg cttatagttc taacacgttg accttcaacc
     9241 atgaaatctt tccagtaatc gtcattagta gtttccatga ccatatattt tttgccgtta
     9301 agcatacctg ttttaatagg gtgtttaaca aaagtatcca tcatagattc gttattctca
     9361 acactttcat aaacaacata ttttgtatct tgtaaatcag tcattttttc atttgttggt
     9421 tgtacatttt ggaattcagt aatagctgat ttcacttgct catctaaagc tttctttgta
     9481 tcctctaatt tcttcttgta ctcagccttt aatttttcag gaagtttatc ttgaatttta
     9541 tttaattcat aaacttgtct ttctagtgtt ttcgcttttt tatatggcgc taataatttt
     9601 tcagctttat aatcttcttc agttttgaat ttatctgcac tgttataaat tggttgtgcg
     9661 aattccatta atgtgtaatc gtatttttct tctttgttat tgaagtgtgt tgaactaaca
     9721 attttaacag cttttgttcc gtttgataca gagaagcgaa tgtaagcata atctttaaca
     9781 gtatcgtatg atactaattt aattggcaac tttttgtcac cttcataaac ttcaaatttt
     9841 ctccaaaatt gacctgattg taatcctaat tcaatttctg gttttgaatc agtgaaaata
     9901 actctagcag gtttaacaga acttgcataa tgataaaact gttgagttcc atctttcttt
     9961 ttcatttcaa aatcaattgg acgagagttt ggtgcgctat gatctttgtc ttttattgca
    10021 gggtttttaa tcgcttctct aagttcctga ttcaaaatag gatatgtatt gttagtggct
    10081 tttgctgctg gtttaacttc ttttgtttcc ttaggggctt taacttcttt aacttcttta
    10141 gcttcttttg tttcagaagt aggggcctca acttctttat tagatactga gacagcatta
    10201 gctactggtt tagtttctgg agctttttca gatgttgttg ttggacttgc aactgcttca
    10261 gtttttggtt gtgcttctgt atttgtacca cctgtttctt cagctgctgc ttgtgcttcg
    10321 ccatttgaca ttaataataa aagtgtacta attgctacag atgcaacgcc tagtgatgac
    10381 tttctaattg aataaaatga tttaaattct ttttgctgtt tgttcatgtt gtagaaacaa
    10441 ctcctaattg tatattatca actgataatc attatcaatt gattacttgt attgtacatt
    10501 gaaatgttag ttaattgcaa cgttatttta taaaaaaata acctatgtta tagattatga
    10561 aatatctatg acataggtta aataaaattt aaaataaaaa atatattaag ttatgagtgt
    10621 gacgatgatt tatttagatt cttttctttt gaaaagtaat aaagataatg aacctaaaag
    10681 ggcaagtgtt gcgaaggcaa ctgtgctaat aaagttatca actgaagtta aaccagtttt
    10741 tggtaattct ttagctttag atgcttgttt aggcgtttcg ttatgttttg taactttgtt
    10801 agtttgttgt gatttattat cacttacagc ttgattgttg ctttcagatt tcgctgttgc
    10861 aacatcttta acaggtgttt gaactttatt ttgttcttga gcagtttgtg ctgttttaac
    10921 tgtatgagca gtttgtgttt tagtttgatc ttttgttgtg tcagtactta caactttagt
    10981 agagtgattg tcttcaactt tgcttgttgt agttacagta ggtttaactt tttcaacttt
    11041 aggttgaact ggtttagttt gctcagtagg tgttttaggt tgagctggtt ttggttgaac
    11101 cggtttaaca ttgtttggtt ttgctgcgtc agctaatgta ggaattgctt tttcaaattc
    11161 caaatgcgta gtatatctat gattgtaatt aatttgtggc acgacaatat gtactttagt
    11221 agttaagctc ttatatccag gttcaactgc aacattgatt gttctagtat ccgctttttt
    11281 attatcgtta acaacagttg ttgctaattc ttgattgttt gcattgtaaa atttgtattc
    11341 tttccagaat gatgcattgt ttaacacggt ttggaaataa tatttattat tttgtttaat
    11401 tactttacca gggtgttgca tatagtcatc catgtgtgac ttctctgaag agccatcttt
    11461 ttgcacttgg aaattaattg gttgtgatgt tgcttgagaa acttgtgtgc tttgattatt
    11521 agttgcgttc gtagcttctg ttgccgcatt gacttgttgg ctgtctgcgc ctatgtatac
    11581 aagggaacct aaaatgatag atgctgtacc cattgtaatc tttttcatag ctgatgaacg
    11641 ttgttctgat tgatacttac tgtttaaata atgttttgtc atgttgtttt cctcctaagg
    11701 atacaaatta tgtgttgtta tatgagatga ttaaccattg caattgataa tggttatcaa
    11761 ttatactagc acatctattt tcgtataaca ataataaatt gattataaaa taaatattga
    11821 caatgataat cattattatt tatgatttta ctaaagactt aaaagcaatc ataaaaagga
    11881 ggattatgtt ttgaaaaata ttttaaaagt ttttaataca acgattttag cgttaattat
    11941 catcattgcg acattcagta attctgcaaa tgccgcagat agcggtactt tgaattatga
    12001 ggtttacaaa tacaatacca atgacacgtc aattgctaat gactatttta ataaaccggc
    12061 aaagtacatt aagaaaaatg gtaaattgta tgttcaaata actgtcaacc acagtcattg
    12121 gattactgga atgagtatcg aaggacataa agaaaatatt attagtaaaa acactgccaa
    12181 agatgaacgc acttctgaat ttgaagtaag taagttgaac ggtaaaatag atggaaaaat
    12241 tgacgtttat atcgatgaaa aagtaaatgg aaagccattc aaatatgacc atcattacaa
    12301 cattacatat aaatttaatg gaccaactga tgtagcaggt gctaatgcac caggtaaaga
    12361 tgataaaaat tctgcttcag gtagtgacaa aggatctgat ggaacgacta ctggtcaaag
    12421 tgaatctaat agttcgaata aagacaaagt agaaaatcca caaacaaatg ctggtacacc
    12481 tgcatatata tatgcaatac cagttgcatc cttagcatta ttaatcgcaa tcacattgtt
    12541 tgttagaaaa aaatctaaag gcaatgtgga ataatgagaa atgttaaaca aattgctaca
    12601 aaatctatta tagctattat tagcttaggt atacttacat gtacaacaat gattggtagc
    12661 gtgttggctg atgagataaa atatccatca gccaaattta atcaacctga agcaaaagat
    12721 aaaacagaat taactacatc aatttttgat gaaaagataa aagagaataa agcgttagag
    12781 ttactaattt ttaatcaaga aaataaaaat gtaactgagg aacaacaact agttgacgaa
    12841 aaggcgcaat tgatttcaga tatgactggt aaaatttact tgcaagtaaa gctaaaaggt
    12901 caaatagata aagaacaact tgtttttcaa aatgacaaaa atgaagaatt tccttttgtt
    12961 ataaaagatg aaaaggatga cacaatagta agaattttaa ttgaacagca tatggataaa
    13021 atcaatatgc atgttaaaac gttggctgaa aagaaaaatc tagataacaa agaaatggtg
    13081 tattctattc attttaaaga gaaaaaagta caacatgatg atgcaaaaga agtgccttca
    13141 aaacatcaaa atcaagaaaa taatcaagat cagctaaaaa aagatattga tgacaaaaaa
    13201 gatagtcaaa aatcagatac taaggaaaga cgtactagcc tttttactga aaaaggatta
    13261 aatgatattc ctgtacaaaa agataaagtg caacaagaca gtaataaaaa gattgaaaat
    13321 gagcgaccta aagcatcagg tacattaaaa gttgaaaata gccctccaac aataaaaaag
    13381 gttgaaaata atcacaaaga gcaaccgaaa cataaagatg aaaaatcaaa aaaggaaaag
    13441 aaaaaagtag ttgaaaaaga aaaagcgtta ccagctttta atagagatga tgatagcaag
    13501 aatagtagtc aattatctag tgatattaaa gaacttgatg aaccaaatca taaaaagcaa
    13561 tatatgttat ttgcagctgg cattgtgtta gcaactattt tacttatttc ggcacattta
    13621 tacagcagaa agagaggtaa ccaagtttga gaatcataaa gtatttaacc attttagtga
    13681 taagcgtcgt tatcttaacc agctgtcaat cttccagttc tcaagaatca actaaatccg
    13741 gcgaattcag aatcgtacca acaactgttg cattgacaat gacattggac aaattggatt
    13801 taccaattgt cggcaaaccc acgtcatata agacattgcc taatcgttat aaagatgtac
    13861 cggaaattgg tcaaccaatg gagccgaatg ttgaagctgt taaaaagtta aaaccaacac
    13921 atgttttgag tgtgtcaacg attaaagatg aaatgcaacc attttacaaa caattaaata
    13981 tgaaaggcta cttttatgat tttgatagtt taaaagggat gcaaaagtcg attacacaat
    14041 taggtgatca atttaatcgt aaagcacaag caaaagaatt aaatgaccat ttaaattctg
    14101 taaagcaaaa aattgaaaat aaagcagcta aacaaaagaa acatcccaaa gtattaatat
    14161 taatgggtgt accgggtagc tatttagtag caactgataa atcatatatt ggtgatttag
    14221 ttaaaatagc aggtggagaa aatgttatta aagtgaaaga tcgtcaatat atttcgtcta
    14281 atactgaaaa tttgttgaat atcaatccag atattatttt acgattacca cacggaatgc
    14341 ctgaagaagt taagaaaatg tttcaaaaag aatttaaaca aaatgatatt tggaaacatt
    14401 ttaaagctgt gaaaaataat catgtttatg acttagagga agtgccattc ggtattacag
    14461 caaatgttga tgctgataag gcaatgactc aattatatga tttattttat aaggataaaa
    14521 aatagtgagt tgatatgatg ataaaaaata aaaagaaact actattttta tgtttgttag
    14581 tcattttaat cgcaactgct tatatttcgt ttgtaaccgg tacaattaaa ttgtcattta
    14641 atgacctatt tacaaaattt acaactggta gcaatgaagc agtggattca atcattgatt
    14701 tgcgattgcc acgtatatta attgcattga tggttggcgc aatgttagca gtttctggag
    14761 cattattaca agcagcacta caaaatcctt tggcagaggc gaatatcatt ggcgtttcct
    14821 caggtgcact tataatgaga gcactttgta tgttgtttat tccacaattg tacttttact
    14881 taccattatt aagttttatt ggaggtttaa taccattttt aataattata ttgttgcatt
    14941 ctaaatttag attcaatgct gtaagtatga tattagtagg tgttgcgtta ttcgtattat
    15001 taaatggtgt tttagaaatt ttaactcaaa accctttaat gaaaattcct caaggcttaa
    15061 caatgaaaat atggagcgac gtatacatat tagcagtatc agcattattg ggattaatat
    15121 taacattact attgtcccct aaattgaatt tactaaattt agacgacata caagcgcgaa
    15181 gtatcggttt taatattgat cgttacagat ggttaacagg tttattagca gtatttttag
    15241 caagtgcaac tgttgcgatt gttggacaac tagccttttt aggtattatt gtgccacatg
    15301 tggttagaaa gctagttggg ggcaattaca gagtacttat tccgttttct acagttattg
    15361 gtgcatggct attgttagtg gctgatttat taggacgagt gatacagcct cctttagaaa
    15421 ttccagccaa tgctatttta atgattgtcg gtggtccaat gctaatttac ttaatttgtc
    15481 aaagtcaacg aaatcgaatc taaaacggta caacaactgg tttagtgatg actgaagaaa
    15541 cgtcgttaat aaaagaggat ttttatgaga atgaagcgat ttttaactat tgtacaaatt
    15601 ttattggttg taattattat catttttggt tacaaaattg ttcaaacata tattgaagac
    15661 aagcaagaac gcgcaaatta tgagaaatta caacaaaaat ttcaaatgct gatgagcaaa
    15721 catcaagaac atgtgagacc acaatttgaa tcacttgaaa aaataaataa agacattgtt
    15781 ggatggataa aattatcagg aacatcatta aattatccag tactacaagg taagacaaat
    15841 cacgattatt taaatttaga ttttgagcga gaacatcgac gtaaaggtag tatttttatg
    15901 gattttagaa atgaattgaa gaatttaaat cataatacta ttttatacgg gcaccatgtc
    15961 ggtgataata cgatgtttga tgtgttagaa gattatttaa agcaatcgtt ttatgaaaaa
    16021 cacaagataa ttgaatttga
//
LOCUS       DALPQQ010000056        16016 bp    DNA     linear   BCT 22-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus strain K18-6-464
            SAMD00233528-rid16434743.denovo.056, whole genome shotgun sequence.
ACCESSION   DALPQQ010000056 DALPQQ010000000
VERSION     DALPQQ010000056.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMD00233528
            Sequence Read Archive: DRR236061
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 16016)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 16016)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001543423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001543423.1
            Genome Coverage       :: 77x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/22/2022 17:09:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,811
            CDSs (total)                      :: 2,743
            Genes (coding)                    :: 2,689
            CDSs (with protein)               :: 2,689
            Genes (RNA)                       :: 68
            rRNAs                             :: 2, 4, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 4, 2 (16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 54
            CDSs (without protein)            :: 54
            Pseudo Genes (ambiguous residues) :: 0 of 54
            Pseudo Genes (frameshifted)       :: 27 of 54
            Pseudo Genes (incomplete)         :: 27 of 54
            Pseudo Genes (internal stop)      :: 10 of 54
            Pseudo Genes (multiple problems)  :: 10 of 54
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..16016
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMD00233528-rid16434743.denovo.056"
                     /strain="K18-6-464"
                     /db_xref="taxon:1280"
                     /geo_loc_name="Japan: Niigata"
     gene            54..641
                     /locus_tag="O7798_001453"
     CDS             54..641
                     /locus_tag="O7798_001453"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498849.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF5080 family protein"
                     /protein_id="HDC2863717.1"
                     /translation="MIIFILITIFAIYYIAMIASLFKSEGFSIIGLILDVVIMGTLIF
                     YYFIGARFVDHDLSNFLMFMDTGSYIFMYFAIKCLWVKPKVVNYLIAKELGESKEVIE
                     EQELDLQTSKIRGIYFFIISVVMLIITKLRMQPELQADAISMNPVFIFVGVIIILIWL
                     VLDIYRKKKYGIFLFKTIVPLVVTTWIIIATIILS"
     gene            complement(784..1677)
                     /locus_tag="O7798_001454"
     CDS             complement(784..1677)
                     /locus_tag="O7798_001454"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498850.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CHAP domain-containing protein"
                     /protein_id="HDC2863718.1"
                     /translation="MKKTILLTMTTLTLFSMSPNSAQAYTNDSKTLEEAKKAHPNAQF
                     KVNKDTGAYTYTYDKNNTPNNNHQNQSRTNDNHQHANQRDLNNNQYHSSLSGQYTHIN
                     DAIDSHTPPQTSPSNPLTPAIPNVEDNDDELNNAFSKDNKGLITGIDLDELYDELQIA
                     EFNDKAKTADGKPLALGNGKIIDQPLITSKNNLYTAGQCTWYVFDKRAKDGHTISTFW
                     GDAKNWAGQASSNGFKVDRHPTRGSILQTVNGPFGHVAYVEKVNIDGSILISEMNWIG
                     EYIVSSRTISASEVSSYNYIH"
     gene            1925..2218
                     /gene="esxA"
                     /locus_tag="O7798_001455"
     CDS             1925..2218
                     /gene="esxA"
                     /locus_tag="O7798_001455"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498851.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="WXG100 family type VII secretion effector EsxA"
                     /protein_id="HDC2863719.1"
                     /translation="MAMIKMSPEEIRAKSQSYGQGSDQIRQILSDLTRAQGEIAANWE
                     GQAFSRFEEQFQQLSPKVEKFAQLLEEIKQQLNSTADAVQEQDQQLSNNFGLQ"
     gene            2302..5331
                     /gene="esaA"
                     /locus_tag="O7798_001456"
     CDS             2302..5331
                     /gene="esaA"
                     /locus_tag="O7798_001456"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498852.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type VII secretion protein EsaA"
                     /protein_id="HDC2863720.1"
                     /translation="MKKKNWIYALIVTLIIIIAIVSMIFFVQTKYGDQSEKGSQSVSN
                     KNNKIHIAIVNEDQPTTYNGKKVELGQAFIKRLANEKNYKFETVTRNVAESGLKNGGY
                     QVMIVIPENFSKLAMQLDAKTPSKISLQYKTAVGQKEEVAKNTEKVVSNVLNDFNKNL
                     VEIYLTSIIDNLHNAQKNVGAIMTREHGVNSKFSNYLLNPINDFPELFTDTLVNSISA
                     NKDITKWFQTYNKSLLSANSDTFRVNTDYNVSTLIEKQNSLFDEHNTAMDKMLQDYKS
                     QKDSVELDNYINALKQMDSQIDQQSSMQDTGKEEYKQTVKENLDKLREIIQSQESPFS
                     KGMIEDYRKQLTESLQDELANNKDLQDALNSIKMNNAQFAENLEKQLHDDIVKEPDTD
                     TTFIYNMSKQDFIAAGLNEDEANKYEAIVKEAKRYKNEYNLKKPLAEHINLTDYDNQV
                     AQDTSSLINDGVKVQRTETIKSNDINQLTVATDPHFNFEGDIKINGKKYDIKDQSVQL
                     DTSNKEYKVEVNGVAKLKKDAEKDFLKDKTMHLQLLFGQANRQDEPNDKKATSVVDVT
                     LNHNLDGRLSKDALSQQLSALSRFDAHYKMYTDTKGREDKPFDNKRLIDMMVDQVIND
                     MESFKDDKVAVLHQIDSMEENSDKLIDDILNNKKNTTKNKEDISKLIDQLENVKKTFA
                     EEPQEPKIDKGKNDEFNTMSSNLDKEISRISEKSTQLLSDTQESKSIADSVSGQLNQV
                     DNNVNKLHATGRALGVRANDLNRQMAKNDKDNELFAKEFKKVLQNSKDGDRQNQALKA
                     FMSNPVQKKNLENVLANNGNTDVISPTLFVLLMYLLSMITAYIFYSYERAKGQMNFIK
                     DDYSSKNHLWNNVITSGVIGTTGLVEGLIVGLIAMNKFHVLAGYRAKFILMVILTMMV
                     FVLINTYLLRQVKSIGMFLMIAALGLYFVAMNNLKAAGQGVTNKISPLSYIDNMFFNY
                     LNAEHPIGLVLVILTVLVIIGFVLNMFIKHFKKERLI"
     gene            5331..5789
                     /gene="essA"
                     /locus_tag="O7798_001457"
     CDS             5331..5789
                     /gene="essA"
                     /locus_tag="O7798_001457"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498853.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type VII secretion protein EssA"
                     /protein_id="HDC2863721.1"
                     /translation="MLMNSVIALTFLTASSNNGGLNIDVQQEEEKRINNDLNQYDTTL
                     FNKDSKAVNDAIAKQKKERQQQIKNDMFQNQASHSTRLNETKKVLFSKSNLEKTSESD
                     KSPYIQNKQEKKIFPYILMSVGAFLTLGFVIFSIHKGRRTKNESARKSNI"
     gene            5761..6003
                     /gene="esaB"
                     /locus_tag="O7798_001458"
     CDS             5761..6003
                     /gene="esaB"
                     /locus_tag="O7798_001458"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001071606.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type VII secretion protein EsaB"
                     /protein_id="HDC2863722.1"
                     /translation="MNQHVKVTFDFTNYNYGTYDLAVPAYLPIKNLIALVLDSLDISI
                     FDVNTQIKVMTKGQLLVENDRLIDYQIADGDILKLL"
     gene            6016..7350
                     /gene="essB"
                     /locus_tag="O7798_001459"
     CDS             6016..7350
                     /gene="essB"
                     /locus_tag="O7798_001459"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498855.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type VII secretion protein EssB"
                     /protein_id="HDC2863723.1"
                     /translation="MVKNHNPKNEMQDMLTPLDAEEAAKTKLRLDMREIPKSSIKPEH
                     FHLMYLLEQHSPYFIDAELTELRDSFQIHYDINDNHTPFDNIKSFTKNEKLRYLLNIK
                     NLEEVNRTRYTFVLAPDELFFTRDGLPIAKTRGLQNVVDPLPVSEAEFLTRYKALVIC
                     AFNEKQSFDALVEGNLELHKGTPFETKVIEAATLDLLTAFLDEQYQKQEQDYSQNYAY
                     VRKVGHTVFKWVAIGMTTLSVLLIAFLAFLYFSVMKHNERIEKGYQAFVKDDYTQVLN
                     TYDDLDGKKLDKEALYIYAKSYIQTNKQGLEKDKKENLLNNVTPNSNKDYLLYWMELG
                     QGHLDEAINIATYLDDNDITKLALINKLNEIKNNGDLSNDKRSEETKKYNDKLQDILD
                     KEKQVKDEKAKSEEEKAKAKDEKLKQQEENEKKQKEQAQKDKEKRQEAERKK"
     gene            7372..11811
                     /gene="essC"
                     /locus_tag="O7798_001460"
     CDS             7372..11811
                     /gene="essC"
                     /locus_tag="O7798_001460"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498856.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type VII secretion protein EssC"
                     /protein_id="HDC2863724.1"
                     /translation="MHKLIIKYNKQLKMLNLRDGKTYTISEDERADITLKSLGEVIHL
                     EQNNQGTWQANHTSINKVLVRKGDLDDITLQLYTEADYASFAYPSIQDTMTIGPNAYD
                     DMVIQSLMNAIIIKDFQSIQESQYVRIVHDKNTDVYINYELQEQLTNKAYIGDHIYVE
                     GIWLEVQADGLNVLSQNTVASSLIRLTQEMPHAQADDYNTYHRSPRIIHREPTDDIKI
                     ERPPQPIQKNNTVIWRSIIPPLVMIALTVVIFLVRPIGIYILMMIGMSTVTIVFGITT
                     YFSEKKKYNKDVEKREKDYKAYLDNKSKEINKAIKAQRFSLNYHYPTVAEIKDIVETK
                     APRIYEKTSHHHDFLHYKLGIANVEKSFKLDYQEEEFNQRRDELFDDAKELYEFYTDV
                     EQAPLINDLNHGPIAYIGARHLILEELEKMLIQLSTFHSYHDLEFLFVTREDEVETLK
                     WARWLPHMTLRGQNIRGFVYNQRTRDQILTSIYSMIKERIQAVRERSRSNEQIIFTPQ
                     LVFVITDMSLIIDHVILEYVNQDLSEYGISLIFVEDVIESLPEHVDTIIDIKSRTEGE
                     LITKEKELVQLKFTPENIDNVDKEYIARRLANLIHVEHLKNAIPDSITFLEMYNVKEV
                     DQLDVVNRWRQNETYKTMAVPLGVRGKDDILSLNLHEKAHGPHGLVAGTTGSGKSEII
                     QSYILSLAINFHPHEVAFLLIDYKGGGMANLFKDLVHLVGTITNLDGDEAMRALTSIK
                     AELRKRQRLFGEHDVNHINQYHKLFKEGIATEPMPHLFIISDEFAELKSEQPDFMKEL
                     VSTARIGRSLGIHLILATQKPSGVVDDQIWSNSKFKLALKVQDRQDSNEILKTPDAAD
                     ITLPGRAYLQVGNNEIYELFQSAWSGATYDIEGDKLEVEDKTIYMINDYGQLQAINKD
                     LSGLEDEETKENQTELEAVIDHIESITTRLEIEEVKRPWLPPLPENVYQEDLVETDFR
                     KLWSDDAKEVELTLGLKDVPEEQYQGPMVLQLKKAGHIALIGSPGYGRTTFLHNIIFD
                     VARHHRPDQAHMYLFDFGTNGLMPVTDIPHVADYFTVDQEDKIAKAIRIFNDEIDRRK
                     KILSQYRVTSISEYRKLTGETIPHVFILIDNFDAVKDSPFQEVFENMMIKMTREGLAL
                     DMQVTLTASRANAMKTPMYINMKTRIAMFLYDKSEVSNVVGQQKFAVKDVVGRALLSS
                     DDNVSFHIGQPFKHDETKSYNDQINDEVSAMTEFYKGETPNDIPMMPDEIKYEDYRES
                     LNLPDIVANGALPIGLDYEGVTLQKIKLTEPAMISSENPREIAHIAEIMMKEIDILNE
                     KYAICIADSSGEFKAYRHQVANFAEEREDIKAIHQLMIEDLKQREMDGPFEKDSLYII
                     NDFKTFIDCTYIPEDDVKKLITKGPELGLNILFVGIHKELIDAYDKQIDVARKMINQF
                     SIGIRISDQQFFKFRFIQREPVIKENEAYMVANQAYQKIRWFK"
     gene            11841..12233
                     /gene="esaC"
                     /locus_tag="O7798_001461"
     CDS             11841..12233
                     /gene="esaC"
                     /locus_tag="O7798_001461"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498857.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type VII secretion substrate EsaC"
                     /protein_id="HDC2863725.1"
                     /translation="MNFNDIETMVKSKFKDIKKHAEEIAHEIEVRSGYLRKAEQYKRL
                     EFNLSFALDDIESTAKDVQTAKSSANKDSVTVKGKAPNTLYIEKRNLMKQKLEMLGED
                     IDKNKESLQKAKEIAGEKASEYFNKAMN"
     gene            12249..12563
                     /gene="esxB"
                     /locus_tag="O7798_001462"
     CDS             12249..12563
                     /gene="esxB"
                     /locus_tag="O7798_001462"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498858.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="WXG100 family type VII secretion effector EsxB"
                     /protein_id="HDC2863726.1"
                     /translation="MGGYKGIKADGGKVDQAKQLAAKTAKDIEACQKQTQQLAEYIEG
                     SDWEGQFANKVKDVLLIMAKFQEELVQPMADHQKAIDNLSQNLAKYDTLSIKQGLDRV
                     NP"
     gene            12563..13237
                     /locus_tag="O7798_001463"
     CDS             12563..13237
                     /locus_tag="O7798_001463"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498859.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF5081 family protein"
                     /protein_id="HDC2863727.1"
                     /translation="MKDVKRIDYFSYEELTILGGSKLPLVNFELFDPSNFEEAKAALI
                     EKELVTENDKLTDAGFKVATLVREYISAIVNIRINDMYFAPFSYEKDEYILLSRFKNN
                     GFQIRIINKDIAWWSIVQSYPLLMRQEKSNDWDFKQIDDETLENLNNESIDTIGRVLE
                     IEIYNHQGDPQQSLYNIYEQNDLLFIRYPLKDKVLNVHIGVINTFIRELFGFDTDENH
                     INKAEE"
     gene            13237..13554
                     /locus_tag="O7798_001464"
     CDS             13237..13554
                     /locus_tag="O7798_001464"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498860.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDC2863728.1"
                     /translation="MTLSGKISVKAETIAHVVKELESISQKYDEIAQNFGKIAQLNYY
                     SSEKAAHSMENGYSSAATVISGLKGPLSTLGGGVMNSAQKFFEADEHWGTEFAKLYYN
                     IEG"
     gene            13564..15408
                     /locus_tag="O7798_001465"
     CDS             13564..15408
                     /locus_tag="O7798_001465"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498861.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease YeeF family protein"
                     /protein_id="HDC2863729.1"
                     /translation="MTKDIEYLTADYDNEKSSIQSVIDAIEGQDFLDVDTTMDDAVSD
                     VSSLDEDGAISLTSSVVGPQGSKLMGYYQNELYDYASQLDSKMKEIIDTPFIEDIDKA
                     FKGITNVKLENILIKNGGGHGRDTYGASGKIAKGDAKKSDSDVYSIDEILKSDQEFVK
                     VIDQHYKEMKKEDKKLSKSDFEKMMTQGASCDYMTVAEAEELEEQKKKEEAIEIAALA
                     GMVVLSCINPVAGAVAIGAYSAYSAANAATGKNIVTGRKLSKEERIMEGLSLIPLPGM
                     GFLKGAGKSLMKLGFKGGEKFAVKTGLQKTMQQAVSRISPKMGMMKNSVLNQSRNFAQ
                     NTHVGQMLSNMRGQATHTVQQSRNWIGQQAQNVKRIVNNGLDKEIAHPFKQQLAPAGM
                     GGIKFAETTTLRNMGQNIKRAVTPQNHVTHGPKDSMVRSEGKHSISSHEMNSSKYVES
                     PNYTKVEFGEHYARLRPKKLKANIEYTTPTGHIYRTDHKGRIKEVYVDNLSLKDGDRN
                     SHAQRTVGGEDRLPDDDGGHLIARMFGGSKDIDNLVAQSKFINRPFKEKGHWYNLEKE
                     WQEFLNSGKEVKNIKMEVKYSGNSQRPTIFKVEYEINGERNIRRILNK"
     gene            15419..15910
                     /locus_tag="O7798_001466"
     CDS             15419..15910
                     /locus_tag="O7798_001466"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498862.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR01741 family protein"
                     /protein_id="HDC2863730.1"
                     /translation="MTFEEKLSKIYNEIANEISSMIPVEWEKVYTMAYIDDGGGEVFF
                     NYTKPGSDDLNYYTNIPKEYNISVQVFDDLWMDLYDLFEELRDLFKEEDLEPWTSCEF
                     DFTREGELKVSFDYIDWINSEFGQIGRQNYYKYRKFGILPETEYEINKVKEIEQYIKE
                     LEE"
BASE COUNT         6087 a         2197 c         3030 g         4702 t
ORIGIN      
        1 atgaaggtaa gacaatgtaa aggaaagaca taaaaaataa taggagtcta accatgataa
       61 tttttatttt aataacaata tttgctattt attatatagc tatgattgct agtttgttta
      121 aaagtgaagg tttttcaata ataggtttaa tattagatgt tgttataatg gggacattga
      181 ttttttacta ttttataggc gctcgctttg ttgatcatga tttaagcaac tttttaatgt
      241 ttatggatac tggatcatat atttttatgt actttgcaat taagtgttta tgggtgaaac
      301 ctaaggtagt aaattatttg attgcaaaag aattgggtga atctaaagag gtcattgaag
      361 agcaggaatt agatttacag acatcaaaga taagaggtat ctactttttc attatttcag
      421 tagtgatgtt aattatcact aaattaagaa tgcaacctga gttacaggca gatgctatat
      481 cgatgaatcc tgtatttatt tttgttggtg ttataatcat tttaatttgg ctagtactgg
      541 atatatatcg caagaaaaaa tacggtatat tcttattcaa gacgatagtg ccactagttg
      601 ttacgacttg gattattata gctacaatta tactttcgta aacgattttg attaatgggg
      661 aatgtagaga acatttcttt gtaattttat aatcgaataa catacaaaat aaagcgacca
      721 attttgcagt gttacgaatt gtaaactgcg aactggtcgc tttttattga tgtcatgatt
      781 aatttaatgg atgtaattat atgatgaaac ttctgaagca gagatggttc ttgatgaaac
      841 gatatattca ccaatccagt tcatttctga aattagaata cttccatcaa tattaacttt
      901 ttcaacgtag gctacatgac caaatggacc atttactgtt tgtaaaattg atcctcgtgt
      961 tgggtgtcta tctactttga agccattgct tgaagcttgg cctgcccagt ttttagcatc
     1021 tccccaaaat gtactaatcg tgtgtccatc tttggcacgt ttatcaaaga cataccatgt
     1081 acattgtcca gcagtatata agttgttctt acttgtgata agaggctgat caatgatttt
     1141 accgttacct aatgctaaag gtttaccgtc agcggtcttt gctttgtcat taaattcggc
     1201 gatttgtaat tcgtcataca attcgtctaa atcgatgcct gtaataagcc ctttgttatc
     1261 ttttgaaaaa gcgttattta attcatcgtc attgtcttcg acattcggta ttgctggtgt
     1321 caaaggattg cttggtgacg tttgaggcgg tgtgtgtgaa tcaattgcgt cattaatgtg
     1381 cgtatactga ccacttaatg aagaatggta ctgattgttg ttaagatcac gttgatttgc
     1441 gtgttgatga ttgtcgtttg tacgtgactg gttttgatga ttgttgtttg gcgtgttgtt
     1501 tttgtcatat gtataagtat acgcgccggt gtctttattc actttgaact gtgcgtttgg
     1561 gtgtgctttc tttgcttctt ctaatgtttt gctatcattc gtatatgctt gagccgagtt
     1621 aggcgacata ctaaataaag taagagttgt catcgtcagt aaaattgttt tcttcataat
     1681 aaccatttaa tcctttatgt atttaattta attttagtat acacatttat attacaaaaa
     1741 tgaatggtta attaaaaata tatgggtata ttcaatatat ttatttaaaa aaagctaaaa
     1801 atacttaaaa aactatatac atatactaat gatttatata ttatttgagt aaggagcact
     1861 ttttcaaaaa atagtgtccc taaaaagttt tgataaactt aaaatattca ggaggtttct
     1921 agttatggca atgattaaga tgagtccaga ggaaatcaga gcaaaatcgc aatcttacgg
     1981 gcaaggttca gaccaaatcc gtcaaatttt atctgattta acacgtgcac aaggtgaaat
     2041 tgcagcgaac tgggaaggtc aagctttcag ccgtttcgaa gagcaattcc aacaacttag
     2101 tcctaaagta gaaaaatttg cacaattatt agaagaaatt aaacaacaat tgaatagcac
     2161 tgctgatgcc gttcaagaac aagaccaaca actttctaat aatttcggtt tgcaataagc
     2221 attctgaaat tggcaaagtc acattttcta atgtggcttt gcttatcatt tttttaagaa
     2281 aacaactgaa aggaaataag catgaaaaag aaaaattgga tttatgcatt aattgtcact
     2341 ttaattatta taattgccat agttagtatg atattttttg ttcaaacaaa atatggagat
     2401 caatcagaaa aaggatccca aagtgtaagt aataaaaata ataaaataca tatcgcaatt
     2461 gttaacgagg atcaaccaac gacatataac ggtaaaaaag ttgagctggg tcaagcattt
     2521 attaaaaggt tagcaaatga gaaaaactat aaatttgaaa cagtaacaag aaacgttgct
     2581 gagtctggtt tgaaaaatgg tggataccaa gtcatgattg ttatcccaga aaacttttca
     2641 aaattggcaa tgcaattaga cgctaaaaca ccatcgaaaa tatcgctaca gtataaaaca
     2701 gctgtaggac aaaaagaaga agtagctaaa aacacagaaa aagttgtaag taatgtactt
     2761 aacgacttta acaaaaactt agtcgaaatt tatttaacaa gcatcattga taatttacat
     2821 aatgcacaaa aaaatgttgg cgctattatg acgcgtgaac atggtgtgaa tagtaaattc
     2881 tcgaattact tattaaatcc aattaacgac ttcccggaat tatttacaga tacgcttgta
     2941 aattcaattt ctgcaaacaa agacattaca aaatggttcc aaacatacaa taaatcatta
     3001 ttgagtgcga attcagatac gttcagagtg aacacagatt ataatgtttc gactttaatt
     3061 gaaaaacaaa attcattatt tgacgagcac aatacagcga tggataaaat gttacaagat
     3121 tataaatcgc aaaaagatag cgtggaactt gataactata tcaatgcatt aaaacagatg
     3181 gacagccaaa ttgatcaaca atcaagtatg caagatacag gtaaagaaga atataaacaa
     3241 actgttaaag aaaacttaga taaattaaga gaaatcattc aatcacaaga gtcaccattt
     3301 tcaaaaggta tgattgaaga ctatcgtaag caattaacag aatcactgca agatgagctt
     3361 gcaaataaca aagacttaca agatgcgcta aatagcatta aaatgaacaa tgctcaattc
     3421 gctgaaaact tagagaaaca acttcatgat gatattgtca aagaacctga tacagataca
     3481 acatttatct ataacatgtc taaacaagac tttatagctg caggtttaaa tgaggatgaa
     3541 gctaataaat acgaagcaat tgtcaaagaa gcaaaacgtt ataaaaatga atataatttg
     3601 aaaaaaccgt tagcagaaca cattaattta acagattacg ataaccaagt tgcgcaagac
     3661 acaagtagtt tgattaatga tggtgtcaaa gtgcaacgta ctgaaacgat taaaagtaat
     3721 gatattaatc aattaactgt tgcaacagat cctcatttta attttgaagg cgacattaaa
     3781 attaatggta aaaaatatga cattaaggat caaagtgttc aactcgatac atctaacaag
     3841 gaatataaag ttgaagtcaa tggcgttgct aaattgaaaa aggatgctga gaaagatttc
     3901 ttaaaagata aaacaatgca tttacaattg ttatttggac aagcaaatcg tcaagatgaa
     3961 ccaaatgata agaaagcaac gagtgttgtg gatgtaacat tgaatcataa ccttgatggt
     4021 cgcttatcga aagatgcatt aagccagcaa ttgagtgcat tatctaggtt tgatgcgcat
     4081 tataaaatgt acacagatac aaaaggcaga gaagataaac cattcgacaa caaacgttta
     4141 attgatatga tggttgacca agttatcaat gacatggaaa gtttcaaaga cgataaagta
     4201 gctgtgttac atcaaattga ttcaatggaa gaaaactcag acaaactgat tgatgacatt
     4261 ttaaataaca aaaagaatac aacaaaaaat aaagaagata tttccaagct gattgatcag
     4321 ttagaaaacg ttaaaaagac ttttgctgaa gagccacaag aaccaaaaat tgataaaggc
     4381 aaaaatgatg aatttaatac gatgtcttca aatttagata aagaaattag tagaatttct
     4441 gaaaagagta cgcaattgct atcagataca caagaatcaa aatcaattgc agattctgtt
     4501 agtggccaat taaatcaagt cgacaataat gtgaataagc tacatgcgac aggtcgagca
     4561 ttaggcgtaa gagctaacga tttgaatcgt caaatggcta aaaacgataa agataatgag
     4621 ttgttcgcta aagaatttaa aaaagtatta caaaattcta aagatggcga cagacaaaac
     4681 caagcattaa aagcatttat gagtaatccg gttcaaaaga aaaacttaga aaatgtttta
     4741 gctaataatg gtaatacaga cgtgatttca ccgacattat tcgtattatt gatgtattta
     4801 ctatcaatga ttacagcata tattttctat agttatgaac gtgccaaagg acaaatgaat
     4861 ttcattaaag atgattatag tagtaaaaac catctttgga ataatgtcat tacgtcaggt
     4921 gttattggta caactggttt ggtagaaggg ttaattgtcg gtttaattgc aatgaataag
     4981 ttccatgtat tagctggcta tagagcgaaa ttcatcttaa tggtgatttt aactatgatg
     5041 gtcttcgtac ttattaatac gtatttacta agacaggtaa aatctatcgg tatgttctta
     5101 atgattgctg cattgggtct atactttgta gctatgaata atttgaaagc agctggacaa
     5161 ggtgtgacta ataaaatttc accattgtct tatatcgata acatgttctt caattattta
     5221 aatgcagagc atcctatagg cttggtgcta gtaatattaa cagtacttgt gattattggc
     5281 tttgtactga acatgtttat aaaacacttt aagaaagaga gattaatcta atgttgatga
     5341 atagcgtgat tgctttaact tttttaacag catctagcaa taatggcgga cttaatattg
     5401 atgtgcaaca agaagaggaa aagcgaatca ataatgattt aaatcaatat gatacaacgc
     5461 tatttaataa agacagcaaa gcggttaatg atgcgattgc taagcagaaa aaagaacgac
     5521 aacaacaaat aaaaaatgat atgtttcaaa atcaagcgag tcactcgact cgcttgaatg
     5581 aaactaaaaa agtgttattt tccaaatcta acttagaaaa gacttcggag agtgataaaa
     5641 gcccctatat tcaaaacaag caggagaaaa aaatattccc gtacattttg atgtctgtag
     5701 gggctttttt gactttagga tttgtcattt tttcaattca taaagggaga cgaacgaaaa
     5761 atgaatcagc acgtaaaagt aacatttgat tttactaatt ataattacgg cacatatgac
     5821 ttagcagtac cagcatattt accgataaaa aacttaatag ctttagtatt ggatagtttg
     5881 gacatttcaa tatttgatgt caatacacaa attaaagtga tgacgaaagg tcaattactt
     5941 gttgaaaatg atcgactcat tgattatcaa atcgctgatg gagatatttt gaagttacta
     6001 taggaggaaa aatagatggt taaaaatcat aaccctaaaa atgaaatgca agatatgtta
     6061 acgcctttag atgctgaaga agcagctaaa acaaaattac gcttagatat gagagagatt
     6121 cctaagtctt caattaaacc agaacatttt catttaatgt acttattaga acaacattct
     6181 ccatatttta tagatgctga attaactgaa ctacgtgaca gtttccaaat acattatgac
     6241 attaatgaca atcatacacc ttttgataat attaaatcat ttactaaaaa tgaaaaatta
     6301 cgttacttac tcaatatcaa aaatttagaa gaagtaaatc gtacacgcta cacatttgtg
     6361 ttggcaccag atgaattatt tttcacaaga gatggattac ccattgctaa aacaagaggg
     6421 ttacaaaatg ttgttgatcc attacctgtg tcagaagctg aatttttaac aagatataaa
     6481 gcgctggtta tctgtgcatt caatgagaaa caatcatttg atgctttagt tgaaggaaac
     6541 ttagaactac ataaaggaac gccatttgaa actaaagtta ttgaagcggc aacgttagat
     6601 ttactaacgg catttttaga tgaacagtat cagaaacaag aacaagatta tagtcaaaat
     6661 tatgcatatg tacgcaaagt aggacatacc gttttcaaat gggttgctat cggtatgaca
     6721 acgttaagtg ttttattaat tgcattctta gcctttttat atttttcagt aatgaagcat
     6781 aatgagcgca ttgaaaaagg ataccaagca tttgtaaagg atgattatac gcaagtacta
     6841 aatacgtatg atgatttaga tggtaaaaaa ttagataaag aggcacttta catttatgcc
     6901 aaaagttata tccaaacaaa taaacaaggt ttagaaaaag ataagaaaga aaatttactt
     6961 aataatgtga caccaaattc aaacaaagac tacttattat attggatgga attaggacaa
     7021 ggacatcttg atgaagcgat taatattgcc acttatttag atgataacga tattacaaag
     7081 ttagcgttga ttaataaatt aaatgagatt aaaaataacg gagatttatc gaatgataaa
     7141 cgttctgaag aaacgaaaaa gtataacgat aaattgcaag atattttaga caaagaaaaa
     7201 caagttaaag atgaaaaagc gaaatctgaa gaagagaaag caaaagcgaa agatgagaaa
     7261 ttaaagcaac aagaagagaa cgaaaagaaa caaaaagaac aagcacaaaa agataaagaa
     7321 aaacgccaag aagctgaaag aaaaaaatag tataggactg aggcaaagac aatgcataaa
     7381 ttgattataa aatataacaa acaattgaag atgctcaatt tgcgagatgg taagacatat
     7441 actattagcg aagacgagcg tgcagatatt acgttgaaat cgttaggcga agtcattcat
     7501 ttagaacaaa ataatcaagg tacttggcaa gcgaatcata cttctattaa taaggtgctt
     7561 gttagaaaag gtgaccttga tgacattaca ttacagcttt atacagaagc tgattatgca
     7621 tcatttgcgt atccttcaat tcaagatacg atgacaattg gaccaaatgc gtatgatgat
     7681 atggttattc aaagcttgat gaatgccatc attattaaag attttcaatc aatacaagaa
     7741 tcacaatacg tacgcattgt gcacgataaa aatacagatg tgtatattaa ctatgaacta
     7801 caagagcaac taacgaacaa agcttacatt ggtgatcata tttatgttga agggatatgg
     7861 ctcgaagtac aagctgatgg tttaaatgta ttgagtcaga atacagtggc atcgtcatta
     7921 attcgcttaa cacaagagat gccacatgca caggcagatg attacaatac gtaccatcgt
     7981 tcgccaagga ttattcaccg tgaaccgacg gatgatatta agattgaaag accgccacag
     8041 ccaatacaga agaacaatac agtgatatgg cgttccatta taccgccatt agtaatgatt
     8101 gctttaactg ttgtcatctt tttagtgaga ccaattggta tttatatttt aatgatgatt
     8161 ggtatgagta cagtaacgat agtatttggt attacaacgt atttctctga aaagaaaaag
     8221 tataacaaag atgttgaaaa acgagagaaa gattacaaag cttatttgga taataaatct
     8281 aaagaaatta ataaagcgat taaagcacaa cgttttagtt tgaattacca ttatccaacg
     8341 gttgctgaaa ttaaagatat cgttgaaacg aaagcaccaa gaatatatga aaaaacatcg
     8401 catcatcacg atttcttaca ttataagtta ggtattgcga atgtagaaaa gtcattcaaa
     8461 ttagattacc aagaagaaga atttaaccaa cgtcgtgatg aactattcga cgatgctaaa
     8521 gaattgtatg aattttacac agatgtagaa caagcaccat taatcaatga tttaaatcat
     8581 gggccaattg catatattgg tgcacgacat ctcattttag aagaattgga gaaaatgcta
     8641 attcaattgt caacattcca tagttatcat gatttagagt ttctatttgt gacacgtgaa
     8701 gatgaagttg aaacattgaa atgggcacgt tggttgccac atatgacatt gagagggcaa
     8761 aacattagag gatttgttta caatcaacga acgcgtgacc aaattttaac gtcaatttat
     8821 agcatgatta aagaacgtat ccaagctgtg cgtgaacgca gcagaagtaa tgagcaaatt
     8881 attttcacac cgcaattagt gtttgtcatt acagatatgt cattaattat tgatcatgtc
     8941 attttagaat atgtaaacca agatttatca gaatatggta tttcattaat ctttgttgaa
     9001 gatgtgattg aaagtttgcc agagcatgta gataccatta ttgatatcaa gtctcgtact
     9061 gaaggcgaac tgattacgaa agaaaaagaa ttagttcaat tgaaatttac acctgaaaat
     9121 attgataacg tcgataaaga atatatcgcg cgacgtttgg cgaatttgat acacgtcgaa
     9181 catttgaaaa atgcaattcc tgatagtatt acatttttag agatgtataa cgtgaaagaa
     9241 gtagatcagc ttgatgtggt taatcgatgg agacaaaacg aaacatacaa aacgatggca
     9301 gtacctttag gtgtaagagg taaagatgat attttatcat tgaacttaca tgaaaaagca
     9361 cacgggccac atggtttagt tgctggtacc actggttcag ggaaatctga gattatccaa
     9421 tcatacattt tatctttagc tattaatttt caccctcatg aagttgcatt cctattgatt
     9481 gactataaag gtgggggtat ggcgaactta tttaaagatt tagtccattt agttggtacg
     9541 attacaaact tagatggcga tgaagcgatg cgtgccttaa catcaatcaa agccgaattg
     9601 agaaaacgtc aacgtttatt cggagagcat gatgttaacc atattaatca ataccataag
     9661 ttatttaaag aaggtattgc gacagaacca atgccacatt tattcattat ttccgatgag
     9721 tttgccgaat taaaatcaga acaacctgat tttatgaaag aacttgtatc aacggcacgt
     9781 attggacgtt cgttaggtat tcatttaata cttgcgacac aaaaaccatc gggtgttgtt
     9841 gatgaccaaa tttggtctaa ctctaaattt aagttggcat taaaagtaca agatagacaa
     9901 gacagtaatg aaattttaaa aacaccagat gcagcagaca ttacattacc aggtcgtgcg
     9961 tatttacaag ttggtaataa tgaaatttat gaattattcc aatctgcatg gagtggtgca
    10021 acatatgaca tcgaaggcga taaattagaa gttgaagata agacgattta catgattaat
    10081 gactatggtc aacttcaagc aatcaacaaa gacttgagtg gacttgaaga tgaagaaacg
    10141 aaagaaaatc aaactgagtt agaagcggtc atagatcata tcgaatctat tacaacacga
    10201 ttagaaatcg aagaagttaa gcgtccatgg ctaccaccat tgccagaaaa tgtatatcaa
    10261 gaagatttag tagaaacaga tttcagaaaa ttatggtcag atgatgcaaa agaagtggaa
    10321 ttaacattag gacttaaaga cgtaccagaa gaacaatatc aaggaccgat ggtattgcaa
    10381 ttgaaaaaag ctgggcacat cgcgttaatc ggaagtccag gatatggtag aacaacgttc
    10441 ttacacaaca ttattttcga tgttgcaaga caccatcgtc ctgatcaagc acacatgtac
    10501 ttgttcgatt tcggtaccaa tggtttgatg ccagttacag acataccaca tgtcgctgat
    10561 tactttacag tagatcaaga agacaagatt gctaaggcga tacgtatatt taatgatgaa
    10621 attgatcgtc gtaagaagat tttaagtcag tatcgtgtca ctagtatttc tgaatatcga
    10681 aaattaactg gtgaaacaat tccgcatgtc tttattctta ttgataactt tgacgcagta
    10741 aaagattcac ctttccaaga agtttttgaa aatatgatga ttaaaatgac gcgtgaaggg
    10801 ctagcattag acatgcaagt aaccttaact gcttcaagag ctaacgctat gaaaacacca
    10861 atgtacatta atatgaaaac gcgtatcgca atgtttttat atgataaatc agaggtgtcg
    10921 aacgtagtag gacagcaaaa atttgcggtt aaagatgttg tgggtcgagc attgttaagt
    10981 agtgatgaca acgtatcatt ccatattggc caaccattta aacatgatga gaccaaatca
    11041 tataatgatc aaattaatga tgaagtatcg gcgatgacag aattttataa aggtgaaaca
    11101 ccaaatgata ttcctatgat gccagatgaa attaaatatg aagattacag agaatcatta
    11161 aacttaccag atatagttgc aaatggtgct ttaccaattg gattagatta tgaaggtgtt
    11221 acactacaaa aaattaaatt aactgaacca gcaatgattt catcagaaaa tccgagagaa
    11281 attgcgcata ttgctgaaat tatgatgaaa gaaattgaca tattaaatga aaaatatgcg
    11341 atttgtatcg cagactcaag tggagagttt aaagcttata ggcatcaagt ggctaacttt
    11401 gccgaagaaa gagaagacat taaagcgatt catcaactaa tgattgaaga cttaaagcaa
    11461 agagaaatgg acggcccatt tgaaaaagat tcactttata ttatcaatga ttttaaaaca
    11521 tttattgatt gcacgtatat tccggaagat gatgttaaaa agcttattac aaaaggacca
    11581 gaacttggct tgaacatttt atttgtcggc attcataaag aattaataga tgcttatgat
    11641 aaacagattg atgttgcacg taaaatgatt aaccaattta gtataggtat tcgtatttca
    11701 gaccaacaat tctttaaatt tagatttatt caacgagaac ctgttattaa agaaaatgaa
    11761 gcatatatgg tcgcaaacca agcttatcaa aagattagat ggtttaaata gcaatgaatt
    11821 aaataggagg gaggtatgtt atgaatttta atgatattga aacaatggtt aagtcgaaat
    11881 ttaaagatat taaaaagcat gctgaagaga ttgcgcatga aattgaagtt cgttctggat
    11941 atttaagaaa agctgaacaa tataagcgat tagaatttaa tttgagtttt gcactagatg
    12001 atattgaaag cacagcaaag gacgtacaaa ctgcaaaatc tagtgctaat aaggacagtg
    12061 taactgttaa gggaaaggcg cccaatacgt tatatattga aaaaagaaat ttgatgaaac
    12121 aaaagcttga aatgttgggt gaagatatcg ataaaaataa agaatccctc caaaaagcta
    12181 aggaaattgc tggcgaaaag gcaagtgaat attttaataa agcaatgaat taatattgag
    12241 gtgaagatat gggtggatat aaaggtatta aagcagatgg tggcaaggtt gatcaagcga
    12301 aacaattagc ggcaaaaaca gctaaagata ttgaagcatg tcaaaagcaa acgcaacagc
    12361 tcgctgagta tatcgaaggt agtgattggg aaggacagtt cgccaataag gtgaaagatg
    12421 tgttactcat tatggcaaag tttcaagaag aattagtaca accgatggct gaccatcaaa
    12481 aagcaattga taacttaagt caaaatctag cgaaatacga tacattatca attaagcaag
    12541 ggcttgatag ggtgaaccca tgatgaaaga tgttaagcga atagattatt tttcttacga
    12601 agaattaaca attttaggtg gtagtaaatt gcctctcgta aattttgaat tgtttgatcc
    12661 atcaaatttt gaagaagcta aagctgcttt aattgaaaag gaattagtaa cagagaatga
    12721 caagttaact gatgcaggtt ttaaagtggc tacattagtc agagagtata ttagcgccat
    12781 tgtaaatatt cgaattaatg atatgtattt tgcaccattt agctatgaaa aagatgaata
    12841 tattttgtta agccggttta aaaataatgg gtttcaaata cgaattatca ataaagacat
    12901 tgcatggtgg tcgattgtac aatcatatcc tttattgatg agacaagaaa agtccaatga
    12961 ttgggacttt aaacaaattg acgatgaaac attggagaac ttaaataatg aaagtatcga
    13021 tacgattggg cgtgttttag aaattgaaat atacaatcat caaggtgacc ctcaacaaag
    13081 tttatataac atttatgaac aaaatgattt gttattcatt cgatacccat taaaagataa
    13141 agtgctgaat gttcatattg gtgtcattaa tacatttata cgagaattat ttggattcga
    13201 tactgatgaa aatcatatta ataaagcaga ggagtaatga cgttgagtgg aaaaattagt
    13261 gttaaagctg aaacgattgc acatgttgta aaagaattgg aaagcataag tcaaaagtat
    13321 gatgaaatag ctcaaaactt tggaaaaata gcgcaattaa attactacag tagtgaaaaa
    13381 gctgcacatt ctatggaaaa tggctatagt agtgctgcaa cagtcattag tggtctcaaa
    13441 ggtccattga gtacactcgg tggtggcgtc atgaattcag cacaaaagtt ctttgaagca
    13501 gatgaacatt ggggtacgga atttgccaag ctttactata atattgaggg ataggtgcat
    13561 gacatgacaa aagatattga atatctaaca gctgattatg acaatgaaaa gtcatctatc
    13621 caaagtgtaa tagatgcaat agagggtcaa gacttcttag atgtagatac aacaatggat
    13681 gatgcggtaa gcgatgtcag ttctttagac gaagatggcg caatatcatt aacaagtagt
    13741 gtagtaggtc cacaaggatc taaattaatg gggtattatc aaaatgagtt atatgattat
    13801 gcatctcaat tagattcgaa aatgaaagaa attattgaca cgccatttat agaagatata
    13861 gataaagcat tcaaaggtat aacgaatgtt aaattggaaa atatactaat taaaaatggt
    13921 ggtggacatg gtagagatac ctatggggct tctgggaaaa ttgcaaaggg agatgccaag
    13981 aaaagtgaca gcgatgttta tagcatcgat gaaatattaa aatcggatca agaatttgta
    14041 aaagtaattg atcagcatta caaagaaatg aaaaaagaag ataagaaatt atctaaaagt
    14101 gattttgaaa aaatgatgac tcagggcgct tcttgtgatt acatgacagt agctgaagcg
    14161 gaagagctag aggagcaaaa gaaaaaagaa gaagctatag agattgcagc actagctggt
    14221 atggtagttt tatcttgtat taatcctgtt gctggagcag tagctattgg tgcttattcc
    14281 gcttattcag cagcaaatgc agccacagga aaaaatattg taactggaag aaagctatct
    14341 aaagaagaac gaatcatgga aggactttcg cttattccat tgccaggtat gggcttcctc
    14401 aaaggtgctg ggaaaagttt aatgaaatta ggcttcaaag gcggagaaaa atttgcagtt
    14461 aaaacaggat tgcaaaagac aatgcaacaa gcagttagtc gtatttcacc taaaatggga
    14521 atgatgaaaa acagtgtgtt gaatcaatct cgtaactttg ctcaaaatac tcatgttgga
    14581 caaatgctga gtaacatgcg tggtcaagca actcatactg ttcaacaaag tagaaattgg
    14641 attggacaac aagcacaaaa tgtcaaacga atagtgaata atggacttga taaagaaata
    14701 gcacatccat ttaaacaaca acttgcacca gcgggaatgg gtggtataaa atttgctgaa
    14761 acaactactt tgagaaacat gggtcaaaac ataaagcgtg ctgttacacc acaaaatcac
    14821 gtgacacatg gtccaaaaga tagtatggtg agaagtgaag gcaaacatag tataagtagc
    14881 catgaaatga attcatcaaa gtatgttgaa tcaccaaact acaccaaggt tgaattcgga
    14941 gaacactatg caagacttag acctaagaaa ctaaaggcga atattgaata cacaacacct
    15001 actggtcaca tatatcgaac cgatcataaa ggtcgcataa aagaagttta tgtagacaat
    15061 ctctctctaa aagatgggga tcgtaatagc catgcacaaa gaactgtggg gggagaggat
    15121 agattaccag acgatgatgg aggtcactta atcgctagaa tgtttggtgg ttcaaaagac
    15181 attgataacc ttgtggcaca aagtaaattt atcaaccgtc catttaagga gaaaggtcat
    15241 tggtataatc ttgagaaaga gtggcaagag ttcttaaact ctgggaaaga ggtgaaaaat
    15301 attaaaatgg aagtaaaata tagcggtaat agtcaaagac cgactatatt taaagttgaa
    15361 tatgaaatta atggtgaaag aaatattaga agaatattaa ataagtagag gtgccaacat
    15421 gacatttgaa gagaagctta gcaaaatata caatgaaatt gcgaatgaga ttagcagtat
    15481 gataccggta gagtgggaaa aagtatatac aatggcttat atagatgatg gaggaggtga
    15541 agtattcttt aattatacta aaccaggtag tgatgacttg aattattaca ccaatatacc
    15601 taaggagtat aacatttctg tgcaagtatt tgatgattta tggatggatt tatatgattt
    15661 atttgaggag ttaagagatt tatttaaaga agaagattta gaaccatgga catcatgcga
    15721 atttgatttt acaagagaag gtgaattaaa agtttcattt gattatattg attggataaa
    15781 ttcagaattt ggtcaaatag gtcgacaaaa ttactataag tatagaaaat ttggaatttt
    15841 accagaaacg gaatatgaaa ttaataaagt taaagaaatc gagcaatata ttaaagagct
    15901 agaagaataa actatcttaa tgtaagacta aacaataaag ctttgtttag tctttttagc
    15961 gtttaagtaa aaagcaatag ataccgtaaa gttgatgctc atcaaataat aatata
//
LOCUS       DALPQQ010000057        16011 bp    DNA     linear   BCT 22-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus strain K18-6-464
            SAMD00233528-rid16434743.denovo.057, whole genome shotgun sequence.
ACCESSION   DALPQQ010000057 DALPQQ010000000
VERSION     DALPQQ010000057.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMD00233528
            Sequence Read Archive: DRR236061
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 16011)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 16011)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001543423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001543423.1
            Genome Coverage       :: 77x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/22/2022 17:09:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,811
            CDSs (total)                      :: 2,743
            Genes (coding)                    :: 2,689
            CDSs (with protein)               :: 2,689
            Genes (RNA)                       :: 68
            rRNAs                             :: 2, 4, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 4, 2 (16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 54
            CDSs (without protein)            :: 54
            Pseudo Genes (ambiguous residues) :: 0 of 54
            Pseudo Genes (frameshifted)       :: 27 of 54
            Pseudo Genes (incomplete)         :: 27 of 54
            Pseudo Genes (internal stop)      :: 10 of 54
            Pseudo Genes (multiple problems)  :: 10 of 54
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..16011
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMD00233528-rid16434743.denovo.057"
                     /strain="K18-6-464"
                     /db_xref="taxon:1280"
                     /geo_loc_name="Japan: Niigata"
     gene            100..339
                     /locus_tag="O7798_001467"
     CDS             100..339
                     /locus_tag="O7798_001467"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001656966.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDC2863731.1"
                     /translation="MSDNLSLFIDYINDNIIYGSEIKREKLENLFNQFAIKNVEKNIV
                     YDELKSLDITIIESQDSYKNKLKRLFSVLLQSKKI"
     gene            complement(371..1045)
                     /locus_tag="O7798_001468"
     CDS             complement(371..1045)
                     /locus_tag="O7798_001468"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001105942.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS6-like element IS257 family transposase"
                     /protein_id="HDC2863732.1"
                     /translation="MNYFRYKQFNKDVITVAVGYYLRYTLSYRDISEILRERGVNVHH
                     STVYRWVQEYAPILYQIWKKKHKKAYYKWRIDETYIKIKGKWSYLYRAIDAEGHTLDI
                     WLRKQRDNHSAYAFIKRLIKQFGKPQKVITDQAPSTKVAMAKVIKAFKLKPDCHCTSK
                     YLNNLIEQDHRHIKVRKTRYQSINTAKNTLKGIECIYALYKKNRRSLQIYGFSPCHEI
                     SIMLAS"
     gene            1099..1470
                     /locus_tag="O7798_001469"
                     /pseudo
     CDS             1099..1470
                     /locus_tag="O7798_001469"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016912861.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hydroxymethylglutaryl-CoA synthase family
                     protein"
     gene            2267..3010
                     /locus_tag="O7798_001470"
     CDS             2267..3010
                     /locus_tag="O7798_001470"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001830227.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycerophosphoryl diester phosphodiesterase"
                     /protein_id="HDC2863733.1"
                     /translation="MLTVYGHRGLPSKAPENTIASFKAASEVEGINWLELDVAITKDE
                     QLIIIHDDYLERTTNMSGEITELNYDEIKDASAGSWFGEKFKDEHLPTFDDVVKIANE
                     YNMNLNVELKGITGPNGLALSKSMVKQVEEQLTNLNQNQEVLISSFNVVLVKLAEEIM
                     PQYNRAVIFHTTSFREDWRTLLDYCNAKIVNTEDAKLTKAKVKMVKEAGYELNVWTVN
                     KPARANQLANWGVDGIFTDNADKMVHLSQ"
     gene            3107..3535
                     /locus_tag="O7798_001471"
     CDS             3107..3535
                     /locus_tag="O7798_001471"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000872606.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MaoC family dehydratase"
                     /protein_id="HDC2863734.1"
                     /translation="MKYDDFIVGETFKTKSLHITEEEIIQFATTFDPQYMHIDKEKAE
                     QSRFKGIIASGMHTLSISFKLWVEEGKYGEEVVAGTQMNNVKFIKPVYPGNTLYVIAE
                     ITNKKSIKKENGLVTVSLSTYNENEEIVFKGEVTALINNS"
     gene            complement(3581..5590)
                     /gene="mecA"
                     /locus_tag="O7798_001472"
     CDS             complement(3581..5590)
                     /gene="mecA"
                     /locus_tag="O7798_001472"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001801873.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PBP2a family beta-lactam-resistant peptidoglycan
                     transpeptidase MecA"
                     /protein_id="HDC2863735.1"
                     /translation="MMKKIKIVPLILIVVVVGFGIYFYASKDKEINNTIDAIEDKNFK
                     QVYKDSSYISKSDNGEVEMTERPIKIYNSLGVKDINIQDRKIKKVSKNKKRVDAQYKI
                     KTNYGNIDRNVQFNFVKEDGMWKLDWDHSVIIPGMQKDQSIHIENLKSERGKILDRNN
                     VELANTGTAYEIGIVPKNVSKKDYKAIAKELSISEDYIKQQMDQNWVQDDTFVPLKTV
                     KKMDEYLSDFAKKFHLTTNETESRNYPLGKATSHLLGYVGPINSEELKQKEYKGYKDD
                     AVIGKKGLEKLYDKKLQHEDGYRVTIVDDNSNTIAHTLIEKKKKDGKDIQLTIDAKVQ
                     KSIYNNMKNDYGSGTAIHPQTGELLALVSTPSYDVYPFMYGMSNEEYNKLTEDKKEPL
                     LNKFQITTSPGSTQKILTAMIGLNNKTLDDKTSYKIDGKGWQKDKSWGGYNVTRYEVV
                     NGNIDLKQAIESSDNIFFARVALELGSKKFEKGMKKLGVGEDIPSDYPFYNAQISNKN
                     LDNEILLADSGYGQGEILINPVQILSIYSALENNGNINAPHLLKDTKNKVWKKNIISK
                     ENINLLTDGMQQVVNKTHKEDIYRSYANLIGKSGTAELKMKQGETGRQIGWFISYDKD
                     NPNMMMAINVKDVQDKGMASYNAKISGKVYDELYENGNKKYDIDE"
     gene            5687..6673
                     /locus_tag="O7798_001473"
     CDS             5687..6673
                     /locus_tag="O7798_001473"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001549960.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="beta-lactam sensor/signal transducer MecR1"
                     /protein_id="HDC2863736.1"
                     /translation="MLSSFLMLSIISSLLTICVIFLVRMLYIKYTQNIMSHKIWLLVL
                     VSTLIPLIPFYKISNFTFSKDMMNRNVSDTTSSVSHMLDGQQSSVTKDLAINVNQFET
                     SNITYMILLIWVFGSLLCLFYMIKAFRQIDVIKSSSLESSYLNERLKVCQSKMQFYKK
                     HITISYSSNIDNPMVFGLVKSQIVLPTVVVETMNDKEIEYIILHELSHVKSHDLIFNQ
                     LYVVFKMIFWFNPALYISKTMMDNDCEKVCDRNVLKILNRHEHIRYGESILKCSILKS
                     QHINNVAAQYLLGFNSNIKERVKYIALYDSMPKPNRNKRIVAYIVCSISSFT"
     gene            6645..6905
                     /locus_tag="O7798_001474"
     CDS             6645..6905
                     /locus_tag="O7798_001474"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001549961.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3387 domain-containing protein"
                     /protein_id="HDC2863737.1"
                     /translation="MYVVYRASHETAKEALGDKELRAIAHELTKTVKDNMSVDWSKRD
                     SAKAKMRVQVRRLLKKYGYPPDLQKMAVEQVVEQAELMASQQ"
     gene            complement(6896..8503)
                     /locus_tag="O7798_001475"
                     /pseudo
     CDS             complement(6896..8503)
                     /locus_tag="O7798_001475"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011274780.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS1182 family transposase"
     gene            complement(8555..9061)
                     /locus_tag="O7798_001476"
     CDS             complement(8555..9061)
                     /locus_tag="O7798_001476"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001092170.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1643 domain-containing protein"
                     /protein_id="HDC2863738.1"
                     /translation="MNTIKSTIHTEAIFSDDEQHRYLLKKTWDEKKAACTVITMYPHL
                     DGVLSLDLTTVLILNQLANSERYGAVYLVNLFSNIRTPENLKHIKNPYDEHTDIHLMK
                     AISESDTVILAYGAYAKRPVVIDRVEQVMEMLKPHKKKVKKLINPVTNEIMHPLNPKA
                     RQKWILKS"
     gene            complement(9076..9387)
                     /locus_tag="O7798_001477"
     CDS             complement(9076..9387)
                     /locus_tag="O7798_001477"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002505017.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF960 domain-containing protein"
                     /protein_id="HDC2863739.1"
                     /translation="MKINRYITRGINESIPLDLQILLWHMVEKKDNQPHTDYLHIFKL
                     QEDENILSITHEQEQPTYKLEYHYTNYEKNQNALPKKVYVIREDDVDAFYYVMLLPEE
                     Y"
     gene            complement(9474..9824)
                     /locus_tag="O7798_001478"
     CDS             complement(9474..9824)
                     /locus_tag="O7798_001478"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002502216.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDC2863740.1"
                     /translation="MKTITQELKQYITHLFQLSNNEAWECEALEEAAENILPERFIND
                     SPLVHLTLETYTYYNDELHELSIYPFLMYANNQLISVGYLDHFDMDFLYLTDTQNIII
                     DERHLLKQGGQDHE"
     gene            complement(10346..11974)
                     /locus_tag="O7798_001479"
     CDS             complement(10346..11974)
                     /locus_tag="O7798_001479"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001186610.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="recombinase family protein"
                     /protein_id="HDC2863741.1"
                     /translation="MQQLKTKRVGIYVRVSTEMQSTEGYSIDGQINQIKEYCDFHHFE
                     VKDIYADRGISGKSMNRPELQRMLKDAKEGNIDCVMVYKTNRLARNTSDLLKIVEDLH
                     KQNVEFFSLSERMEVNTSSGKLMLQILASFSEFERNNIVENVFMGQTRRAQEGYYQGN
                     LPLGYDKIPDSKHELMINQHEANIVKYIFECYAKGHGYRKIANALNHKGYVTKKGKPF
                     SISSITYILANPFYIGKIQFAKYKDWSEKRRKGLNDKPVIAEGKHSPIINQDLWDKVQ
                     MRKKQVSQKPQVHGKGTNLLTGIIHCPQCGAPMAASNTTNTLKDGTKKRIRYYSCSNF
                     RNKGSKVCSANSVRADVIEDYVMKQILEIVKSDKVIQRVVTHVNQENQVDGAALHHDI
                     AYKQQQYDEVQIKINNLIKTIEDNPDLTSVIRPSIQKYEKQLNDITNQINQLKNQQNE
                     DKTLFDAKEISKLLQHIFHDIKHIEKSRLKALYLSVIDRIDIKKDGNHKKQFYVTLKL
                     NNEIIKQLFNNKQLDEVHLSTSSLFLPQTLYLTI"
     gene            complement(11996..13345)
                     /locus_tag="O7798_001480"
     CDS             complement(11996..13345)
                     /locus_tag="O7798_001480"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000815654.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="recombinase family protein"
                     /protein_id="HDC2863742.1"
                     /translation="MKQVIGYLRQSTMKQQSLAAQKQAIEAIAEKHHIQHINFYSDKQ
                     SGRKDNRSGYRQITQLIQQGQCDILCCYRLNRLHRNLKNALKLIKLCQTYHVHILSVH
                     DGYFDMDQAFDRLKLNIFISLAELESDNIGEQVRNGLQEKAKQGRLITTHAPFGYEYH
                     NGTFIINQNESPTVKAVFNYYIKGHGYKKIAQLLEEDNTYINRQPYQVRNIIINPNYC
                     GRVNNQYGQFDNMFPSIVSTSIYEQAQRLRLQKQTKQTPSDNQLKQKIKCPCCNATLT
                     NMTIRKKNHTLRYYVCPKNMNASRFVCDFKGINAQTLEDKVLEVCRDFYQNQRIYTKI
                     KSAIDKRIKRQRNIEKHHTLTQEQLIEKLAQGIIDAETFREQTQSLRQQPQRTTSING
                     HQIQHIIQNIIQKRFTLNILYPYIETIHITKDKNLIGIYFKNEPLNIVNQTMQSSIA"
     gene            complement(13579..15372)
                     /locus_tag="O7798_001481"
     CDS             complement(13579..15372)
                     /locus_tag="O7798_001481"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002469147.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF927 domain-containing protein"
                     /protein_id="HDC2863743.1"
                     /translation="MNQTNPSFNPSPRYKSKKGWYKDNPPKEKGGMPTEVEIAGPIVI
                     ENKFIDPKTNTEKVIITDEDQKVIVESSDILTTQKLPSLMKYGFSINEKYTKDLGYAL
                     QQMRNQLPISYLYEGVGILETPFGPIVSLNEIYTTTEFDNKSPSDAICENTYDLAPRG
                     TFDNWFNMYIDEVKDHLLLELTVIFGISALVTSFLKHKHEIEFSGILFSFTGQSSTGK
                     STAAALAVSVAGNPTKGNETLFRSWNATRNALEGYLSNNYGVPIVFDELSSTTLKDTT
                     GLLYSIAEGQGRQRSNVHGEVKAPKNWGTSVISTSEYSIFNDSAQNDGLRVRTIEINE
                     QFTTNATNADNIKKAVALNYGHVLPLVAKYLINREDEVIQWFYKEVDWFEAKLKDDKS
                     NTGNRMFKRYAVITTSAKILGRVLSTDIDIANIRDYFIDYHTHTVSERSLADKAIDVI
                     IQFVAQNRGKFSDEGALKNMFENYGLISLKDDHIEVKIIANVFKQMLNNHQFQDVNNV
                     VNALRDKGFILADRGRQTTKRSVKDNSGKKQSLVFYHLKLDVEFASILGLTKDKSLLQ
                     NWTPSNDNKAAKELFKSANEGIGPSGVHEDF"
     gene            complement(15372..15680)
                     /locus_tag="O7798_001482"
     CDS             complement(15372..15680)
                     /locus_tag="O7798_001482"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000660731.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDC2863744.1"
                     /translation="MKEKSYEQELLYEGVKIVTKKLSPNTEYSFNELKNMAIKMPQFN
                     NVDLSINEQREVGRRYSSWVKKCPQANVIIINRKSNRNLIYRKVSTNNISHPSKGGAR
                     "
BASE COUNT         4925 a         2468 c         2683 g         5935 t
ORIGIN      
        1 aatttgtcga tatttaagtt gagttaaatt taaagggtgt aatttgtttt acaatgatga
       61 agataattag tctatcaaaa taaaggggtt gggactgtta tgagtgataa tttgtcatta
      121 ttcattgact atatcaatga taatataatc tatggtagtg aaatcaaacg ggagaaatta
      181 gagaatttat ttaatcaatt tgctataaaa aatgttgaaa agaacattgt ctatgatgaa
      241 ctgaaatctt tagatattac aatcattgag tcacaggatt catataaaaa taaattgaag
      301 agattatttt cggttctgtt gcaaagtaaa aaaatatagc taaccactaa tttatcatgt
      361 cagtgttcgc ttaacttgct agcatgatgc taatttcgtg gcatggcgaa aatccgtaga
      421 tctgaagaga cctgcggttc tttttatata gagcgtaaat acattcaata ccttttaaag
      481 tattctttgc tgtattgata ctttgatacc ttgtctttct tactttaata tgacggtgat
      541 cttgctcaat gaggttattc agatatttcg atgtacaatg acagtcaggt ttaagtttaa
      601 aagctttaat tactttagcc attgctacct tcgttgaagg tgcctgatct gtaattacct
      661 tttgaggttt accaaattgt ttaatgagac gtttgataaa cgcatatgct gaatgattat
      721 ctcgttgctt acgcaaccaa atatctaatg tatgtccctc tgcatcaatg gcacgatata
      781 aatagctcca ttttcctttt attttgatgt acgtctcatc aatacgccat ttgtaataag
      841 cttttttatg ctttttcttc caaatttgat acaaaattgg ggcatattct tgaacccaac
      901 ggtagaccgt tgaatgatga acgtttacac cacgttccct taatatttca gatatatcac
      961 gataactcaa tgtatatctt agatagtagc caacggctac agtgataaca tccttgttaa
     1021 attgtttata tctgaaatag ttcatacaga agactccttt ttgttaaaat tatactataa
     1081 attcaacttt gcaacagaac cgtattatgg aatagagatg ttggtaacat ttatacagga
     1141 tcattatact taagtttaat ttcgttatta cagaaccaca cattccaacc agaagagaaa
     1201 gtatgtctat ttagttatgg ttcaggagca gtaggagaaa tctttagtgg ttcaatcgtt
     1261 aaaggatatg acaaagcatt agataaagag aaacacttaa atatgctaga atctagagag
     1321 caattatcag tcgaagaata cgaaacattc tttaacagat ttgataatca agaatttgat
     1381 ttcgaacgtg aattgacaca agatccatat tcaaaagtat acttatacag tatagaagac
     1441 catatcagaa catataagat agagaaataa actagtggcc gattgtgctt gatgagcttg
     1501 ggacataaat cctaactcga aataaataag catatcacta aactgatttt ttaaagttta
     1561 cagtgatatg cttatttttt tatcttacga ttttgtacgt gcatgcttgc ctaggggtat
     1621 ggctcgagcc attagtctct cgcacatact attccctcag gcgtcagcac ttacaaaatc
     1681 ggttgtaatt ttcattttta tacgcattct tactgagatt atactaataa gaggaatagt
     1741 aaaagcaatt ctaagtaaaa ttgcagataa gaggtttgtt aaaagcagtt ctaagtaaaa
     1801 ttgcagataa gaggtttgtt aaaagcagtt ctcagtaaaa ttacagataa gaggtacgtt
     1861 aaaagcagtt ctaagtaaaa ttgcagataa gaggtttgtt aaaagcagtt ctaagtaaaa
     1921 ttgcagataa gaggtacgtt aaaagcagtt ctaggcaaaa ttgcagataa gaggtgcgtt
     1981 aaaagcagtt ctcagtaaaa ttgctgataa ggggtaagtt aaaagcaatc ctaagtaaaa
     2041 ttgcagataa ggggtacaga aaaactagac ttgattacaa aatggagctt gggacataaa
     2101 tgatttttta aaaatgagat gagacgtaga ttaactccat aatcaatacg aatctatcga
     2161 cttctttatt tatgatattc atctcttttt aatggaaata aaagtgcgat taatgtgata
     2221 atacagttac gttaattaaa aaaataaaaa tgcaaggaga ggtaatatgc taactgtata
     2281 tggacataga ggattaccta gtaaagctcc ggaaaataca attgcatcat ttaaagctgc
     2341 ttcagaagta gaaggtataa actggttgga gttagatgtt gcaattacaa aagatgaaca
     2401 actgattatc attcatgatg attatttaga acggactaca aatatgtccg gggaaataac
     2461 tgaattgaat tatgatgaaa ttaaagatgc ttctgcagga tcttggtttg gtgaaaaatt
     2521 caaagatgaa catttgccaa ctttcgatga tgtagtaaaa atagcaaatg aatataatat
     2581 gaatttaaat gtagaattaa aaggtattac tggaccgaat ggactagcac tttctaaaag
     2641 tatggttaag caagtggaag aacaattaac aaacttaaat cagaatcaag aagtgctcat
     2701 ttcaagcttt aatgttgtgc ttgttaaact tgcagaagaa atcatgccac aatataacag
     2761 agcagttata ttccatacaa cttcgtttcg tgaagactgg agaacacttt tagattactg
     2821 taatgctaaa atagtaaaca ctgaagatgc caaacttact aaagcaaaag taaaaatggt
     2881 aaaagaagcg ggttatgaat tgaacgtatg gactgtaaac aaaccagcac gtgcaaacca
     2941 acttgctaat tggggagttg atggtatctt tacagacaat gcagataaaa tggtgcattt
     3001 gtctcaatag aaagttagag gtgagtctta cgtttcagtg acggtagact tacctttaac
     3061 atgttacata ctaaaaaatt aatttgaata agaaagagag acatatatga aatacgatga
     3121 ttttatagta ggagaaacat tcaaaacaaa aagccttcat attacagaag aagaaattat
     3181 ccaatttgca acaacttttg atcctcaata tatgcatata gataaagaaa aagcagaaca
     3241 aagtagattt aaaggtatca ttgcatctgg catgcataca ctttcaatat catttaaatt
     3301 atgggtagaa gaaggtaaat acggagaaga agttgtagca ggaacacaaa tgaataacgt
     3361 taaatttatt aaacctgtat acccaggtaa tacattgtac gttatcgctg aaattacaaa
     3421 taagaaatcc ataaaaaaag aaaatggact cgttacagtg tcactttcaa catacaatga
     3481 aaatgaagaa attgtattta agggagaagt aacagcactt attaataatt cataataaaa
     3541 cagtgaagca accatcgtta cggattgctt cactgttttg ttattcatct atatcgtatt
     3601 ttttattacc gttctcatat agctcatcat acactttacc tgagattttg gcattgtagc
     3661 tagccattcc tttatcttgt acatctttaa cattaatagc catcatcatg tttggattat
     3721 ctttatcata tgatataaac cacccaattt gtctgccagt ttctccttgt ttcattttga
     3781 gttctgcagt accggatttg ccaattaagt ttgcataaga tctataaata tcttctttat
     3841 gtgttttatt tacgacttgt tgcataccat cagttaatag attgatattt tctttggaaa
     3901 taatattttt cttccaaact ttgtttttcg tgtcttttaa taagtgaggt gcgttaatat
     3961 tgccattatt ttctaatgcg ctatagattg aaaggatctg tactgggtta atcagtattt
     4021 caccttgtcc gtaacctgaa tcagctaata atatttcatt atctaaattt ttgtttgaaa
     4081 tttgagcatt ataaaatgga taatcacttg gtatatcttc accaacacct agttttttca
     4141 tgcctttttc aaatttctta ctgcctaatt cgagtgctac tctagcaaag aaaatgttat
     4201 ctgatgattc tattgcttgt tttaagtcga tattaccatt taccacttca tatcttgtaa
     4261 cgttgtaacc accccaagat ttatcttttt gccaaccttt accatcgatt ttataacttg
     4321 ttttatcgtc taatgttttg ttatttaacc caatcattgc tgttaatatt ttttgagttg
     4381 aacctggtga agttgtaatc tggaacttgt tgagcagagg ttctttttta tcttcggtta
     4441 atttattata ttcttcgtta ctcatgccat acataaatgg atagacgtca tatgaaggtg
     4501 tgcttacaag tgctaataat tcacctgttt gagggtggat agcagtacct gagccataat
     4561 catttttcat gttgttataa atactctttt gaactttagc atcaatagtt agttgaatat
     4621 ctttgccatc ttttttcttt ttctctatta atgtatgtgc gattgtattg ctattatcgt
     4681 caacgattgt gacacgatag ccatcttcat gttggagctt tttatcgtaa agtttttcga
     4741 gtcccttttt accaataact gcatcatctt tatagccttt atattctttt tgttttaatt
     4801 cttcagagtt aatgggacca acataaccta atagatgtga agtcgctttt cctagaggat
     4861 agttacgact ttctgtttca ttagttgtaa gatgaaattt ttttgcgaaa tcacttaaat
     4921 attcatccat ttttttaacg gttttaagtg gaacgaaggt atcatcttgt acccaatttt
     4981 gatccatttg ttgtttgata tagtcttcag aaatacttag ttctttagcg attgctttat
     5041 aatctttttt agatacattc tttggaacga tgcctatctc atatgctgtt cctgtattgg
     5101 ccaattccac attgtttcgg tctaaaattt taccacgttc tgattttaaa ttttcaatat
     5161 gtatgctttg gtctttctgc attcctggaa taatgacgct atgatcccaa tctaacttcc
     5221 acataccatc ttctttaaca aaattaaatt gaacgttgcg atcaatgtta ccgtagtttg
     5281 ttttaatttt atattgagca tctactcgtt ttttattttt agatactttt tttattttac
     5341 gatcctgaat gtttatatct ttaacgccta aactattata tatttttatc ggacgttcag
     5401 tcatttctac ttcaccatta tcgcttttag aaatataact gctatcttta taaacttgtt
     5461 tgaaattttt atcttcaatt gcatcaatag tattattaat ttctttatct tttgaagcat
     5521 aaaaatatat accaaacccg acaactacaa ctattaaaat aagtggaaca atttttatct
     5581 ttttcatcaa tatactcctt atataagact acatttgtag tatattacaa atgtagtatt
     5641 tatgtcaaaa taatgttata atttttgtga tatggaggtg tagaaggtgt tatcatcttt
     5701 tttaatgtta agtataatca gttcattgct cacgatatgt gtaatttttt tagtgagaat
     5761 gctctatata aaatatactc aaaatattat gtcacataag atttggttat tagtgctcgt
     5821 ctccacgtta attccattaa taccatttta caaaatatcg aattttacat tttcaaaaga
     5881 tatgatgaat cgaaatgtat ctgacacgac ttcttcggtt agtcatatgt tagatggtca
     5941 acaatcatct gttacgaaag acttagcaat taatgttaat cagtttgaga cctcaaatat
     6001 aacgtatatg attcttttga tatgggtatt tggtagtttg ttgtgcttat tttatatgat
     6061 taaggcattc cgacaaattg atgttattaa aagttcgtca ttggaatcgt catatcttaa
     6121 tgaacgactt aaagtatgtc aaagtaagat gcagttctac aaaaagcata taacaattag
     6181 ttatagttca aacattgata atccgatggt atttggttta gtgaaatccc aaattgtact
     6241 accaactgtc gtagtcgaaa ccatgaatga caaagaaatt gaatatatta ttctacatga
     6301 actatcacat gtgaaaagtc atgacttaat attcaaccag ctttatgttg tttttaaaat
     6361 gatattctgg tttaatcctg cactatatat aagtaaaaca atgatggaca atgactgtga
     6421 aaaagtatgt gatagaaacg ttttaaaaat tttgaatcgc catgaacata tacgttatgg
     6481 tgaatcgata ttaaaatgct ctattttaaa atctcagcac ataaataatg tggcagcaca
     6541 atatttacta ggttttaatt caaatattaa agaacgtgtt aagtatattg cactttatga
     6601 ttcaatgcct aaacctaatc gaaacaagcg tattgttgcg tatattgtat gtagtatatc
     6661 gagcttcaca tgaaacagct aaagaagctt tgggcgataa agagttaaga gccattgcac
     6721 atgagttaac taaaacagtt aaggataaca tgagtgttga ttggtctaaa cgagacagtg
     6781 ctaaagctaa aatgagagtt caagttagac gcctattaaa gaaatatggc tatccaccag
     6841 atcttcaaaa aatggctgtg gaacaagttg tagagcaagc agaattaatg gcaagtcagc
     6901 aataaaaaaa taaatcataa tgagtccggg acataaagtt cttggataag tgaaaaaaga
     6961 caatttctat tgaaataata tagaaattgt cttttttata aattttttga ttattttcag
     7021 ctcgttgagc tactactttt cttatattaa gtgccattaa tacaaaacca agttctcttt
     7081 tgactttatt gagtcctcgg acagacatcc gagtgaaacc caaaatagcc ttcataaatc
     7141 caaaaacagg ttccacatca atttttcttt gactgtagat attttttgtt tctggttctg
     7201 aaagcttttt gttaatttgg gatttaaaat attcccagtt ataattcttc attatttttt
     7261 tgtttgtttt tgaattgaag ttcatacatt gatttttcag aggacattct gaacaatcat
     7321 cacattcata taatttgaag tctcgcttat aaccatactt atcatgacga taggcatatc
     7381 ttttaaaacc tagccgttta ttattcggac aaatgaattc gtcattaatt tcgtcatagt
     7441 tccaattttg agtattaaag atgtcacttt tatatttttt agttttatct tttataaaca
     7501 ttccatatgt tatgagtggc gttcgattaa agtcatctat aattgcctta taatttgatt
     7561 cactaccata acctgcatca gctacaatat attcaggtaa atgaccgtag gtctcttgaa
     7621 ttgaatttaa aaatggaatc atcgttctag tatccgttgg attttgatac acattataag
     7681 ataaaacaaa ttgggaattt gttgctattt gtaaattata ccctggctta agttgtccat
     7741 ttttcatgtg atcttctttc attctcataa atgtcgcatc ataatctgtc ttagaataac
     7801 tatttctatc ctttaaaata gatttttgaa attcgtatcg atactttcgc tcaaaataat
     7861 cattgatttg ctttttgtat tttttgattt tagttctttt gagacgtatt tgttttcttg
     7921 ttttagtaca tttttcattg ttgatatgtt ggtttaaatc ttcgatttct ttatctaagt
     7981 gactaccaat caaatctatt tcttcttttg ttaattcatt atcatgatct tctttaattt
     8041 ccggtatgat tttattggtt accaattcat ggtagagggc tttagaatcc tcattcatct
     8101 ttgattcatg gttttgaata ctctttttcc atacaaatgt atatcgattg gcatttgctt
     8161 caatttttgt accatcaata aaaatagctt tatcatctat aagattttgt tttacacact
     8221 gactgtaaaa ttgaataaat aaagattcta ataaagcatc tacttttgga tttactctaa
     8281 attgattaat tgttttataa gaaggttttt gattttgtga tagccacatc attcggatgc
     8341 tatcattaag cattttttct attttacgac ctgagaatac agattgtgtg taggcatata
     8401 gaatcacttt taacatcatt ttaggatggt acgaagttgc accacggtga tgtctgaatt
     8461 cgtcgaattc attgtcagga attgtttcaa caatatcatt tacagtaaaa cgatgttgat
     8521 ttgttttgtt tccatattga cctccatgta tttgctatga tttcaaaatc catttttgac
     8581 gtgccttagg gttgagtgga tgcataattt catttgttac tggattgatg agctttttta
     8641 ctttcttttt atgaggtttt aacatttcca tcacttgttc gacacggtcg ataacaactg
     8701 gtcgcttcgc ataggcacca taagcaagaa tcactgtgtc actttcacta atcgctttca
     8761 tcaaatgaat atcagtgtgc tcatcgtatg gatttttgat atgtttgagg ttttcgggtg
     8821 ttctaatatt agagaataga tttacaagat atacagcacc gtatcgttct gaattggcta
     8881 attggttgag gataagaaca gttgtgagat cgagtgataa tacaccgtct aaatgaggat
     8941 acatcgttat cactgtgcat gcagctttct tttcatccca tgttttcttg agtaaatagc
     9001 ggtgctgttc atcatcgcta aatatggctt ctgtgtgtat cgtacttttg attgtattca
     9061 tcatcgtcac ttcctttagt attcttctgg taaaagcatc acataataaa aagcgtccac
     9121 gtcatcttca cgaatgacgt agactttctt aggtaatgca ttttgatttt tttcatagtt
     9181 tgtatagtga tattccaatt tgtatgtggg ttgttcttgt tcatgtgtga ttgagagtat
     9241 attctcatct tcttgtaatt taaaaatgtg taggtaatct gtatgaggct ggttatcttt
     9301 tttttctacc atgtgccaaa gtaagatttg aaggtctagt ggaatacttt cattaattcc
     9361 tcttgtgatg tatcgattga ttttcatgct atttccctcc cttctgcttt tctttcatga
     9421 tgtcgatgat ttcgttgata actgtgacgg ataattgagc aactatgatc caattattca
     9481 tggtcctgac ctccttgttt tagtaaatga cgttcatcaa taatgatatt ttgagtatct
     9541 gtaaggtaca gaaagtccat gtcaaaatgg tctaagtatc cgacactgat gagttggtta
     9601 ttggcataca ttagaaatgg atagatactt agctcatgta gttcatcatt atagtaggta
     9661 taagtctcga gtgtgagatg taccagtgga gaatcattaa taaaacgttc cggtagaata
     9721 ttttctgctg cttcctccag cgcttcacat tcccaagctt cgttattaga tagttggaat
     9781 aggtgggtta tatattgttt gagttcttga gtgatggttt tcatattatt gcctcctaga
     9841 tagtgtaata gtgatgtagt tcatatacat cattgagata atatatattt gatttgtcat
     9901 ttattacgaa tcccggtggg aataagagaa aattccatat aaaaacccgc tacaaacgtt
     9961 ggtatgccaa ggaaatcctg aaattccgcc tattttgaca aacaatcaac tcattattta
    10021 taagtattga tgatagggtt gtgtctctgc ttccttatat atattattta tttataaaaa
    10081 gtaacgggat tttgggattg tgcttgcaca atccttctgt ttcttcgaat ctgcaaatcc
    10141 caatcatttc ccgataaaaa atcattgtgg gatgttcttt agcaatttca atataagcat
    10201 tgtatagtta tgaaaaaatt acgacaataa ctgtttcatt agataagtgt tattgaaatt
    10261 gataaagagc aattcttgaa aatagttaga taaaataagc gaaagaatat agtgaaaatt
    10321 attgttataa caatgattct attagctaaa tagtaagata tagtgtttgg ggcaaaaata
    10381 aagacgaagt gctgagatgc acttcgtcga gttgtttatt attgaaaagt tgtttaatga
    10441 tttcgttatt aagtttgagt gtgacataga attgtttttt atgattacca tcttttttaa
    10501 tatcaatgcg atcaatcact gatagataca atgctttgag tcgagatttt tctatgtgtt
    10561 taatatcatg aaagatgtgt tgtaatagtt tactgatttc tttggcatca aataaagtct
    10621 tatcttcatt ttgttgattt ttgagttggt tgatttgatt cgtaatgtca ttgagttgct
    10681 tttcatattt ttgaatactt ggtctgatta ctgatgttaa gtccggatta tcctcgatgg
    10741 ttttaatcaa gttatttatt ttgatttgta cttcatcata ttgttgttgc ttataagcaa
    10801 tatcgtgatg aagtgcagcg ccatcaactt gattttcttg attgacgtgt gttactacgc
    10861 gttgaatgac tttatcactt ttgactattt caagtatttg cttcatcaca taatcttcaa
    10921 tcacatcagc tcttacactg tttgccgaac atactttgga acccttgttc cgaaaattac
    10981 tacatgaata gtaacgaata cgtttcttag tcccgtcttt aagagtattc gtggtattgc
    11041 ttgctgccat aggtgcgcca cattggggac agtgaataat gcctgtaagc agattcgttc
    11101 ctttgccatg gacttggggt ttttgactga cttgtttctt acgcatttgt actttatccc
    11161 ataaatcttg attaataatg ggggaatgct taccttcagc tatcactggt ttatcattca
    11221 gccctttacg acgtttttca ctccaatctt tgtatttcgc aaattgaatt ttgccgatat
    11281 agaaagggtt agctaagatg tatgtgattg aactaatact gaaaggtttc ccctttttag
    11341 tgacatatcc tttgtgattc aatgcattgg caattttacg atagccatgt cctttggcat
    11401 agcactcgaa tatatatttt acaatattag cttcatgttg gttaatcatt agctcgtgtt
    11461 tactatctgg tattttgtca taacctagtg gtaaattgcc ttgataatag ccttcttggg
    11521 cacgtctcgt ttgacccata aatacgttct cgacaatgtt attacgttcg aattctgaga
    11581 aactcgcaag tatctgtaac atgagtttac cagaagaagt attgacttcc atacgctctg
    11641 acaaactgaa aaattcgaca ttttgtttgt gtaaatcttc gacaattttg agaagatcag
    11701 atgtattacg agctaatcgg tttgttttgt ataccataac acagtcgata ttgccttctt
    11761 ttgcatcttt caacatacgt tggagctcag gtctgttcat agatttacct gaaataccac
    11821 ggtcagcgta tatatcttta acttcaaaat gatggaagtc acagtattct ttgatttgat
    11881 tgatttgtcc gtcgatacta taaccttctg tgctttgcat ttctgttgat acacgtacat
    11941 agataccgac acgttttgtt ttaagttgtt gcattatgtt acatcctttc ttcatttatg
    12001 caatcgatga ttgcatggtt tgattgacaa tattgagtgg ttcatttttg aaatagattc
    12061 ctataagatt tttatctttc gtaatgtgaa tggtttcaat ataggggtac aatatgttta
    12121 acgtgaaacg tttttgaata atattttgaa tgatgtgttg tatttgatgc ccattgatag
    12181 atgtagtgcg ttgcggttgt tgacgtaatg attgtgtttg ctctctgaac gtttctgcat
    12241 caatgatgcc ttgtgccaac ttttctatca gttgttcttg agtcaatgtg tgatgttttt
    12301 ctatgtttct ttgtcttttg atgcgtttgt caatcgcact tttaattttt gtgtagatgc
    12361 gttgattttg ataaaagtct cggcacactt ctaatacttt atcttcaagt gtttgtgcat
    12421 tgatgccttt aaaatcacag acaaagcgtg aagcattcat gtttttagga cagacgtagt
    12481 aacgtaatgt atgattcttt tttctaatgg tcatatttgt aagtgttgca ttacaacatg
    12541 ggcatttgat tttttgtttg agttgattat ccgaaggtgt ctgtttggtt tgtttttgca
    12601 atcgaagtct ctgcgcttgc tcatatatac ttgtggaaac aatagaagga aacatattgt
    12661 cgaattggcc atattgattg ttgacacgac cacaataatt aggattgatg ataatgttac
    12721 gaacttgata gggttgtcga ttgatatacg tgttatcttc ttctaataac tgtgcaattt
    12781 tcttataacc atgaccttta atgtaataat tgaatacagc ctttaccgtt ggtgactcat
    12841 tttgattgat gatgaatgtt ccgttgtgat attcgtaacc aaaaggtgca tgtgttgtaa
    12901 tcaatcgacc ttgctttgct ttttcttgaa gcccatttct gacttgttct ccaatgttat
    12961 ccgattcaag ttcggctaaa ctgatgaaga tattaagctt gagtcggtcg aaagcttgat
    13021 ccatatcaaa gtaaccatca tgtacgctta agatatgaac atggtacgtt tgacataatt
    13081 tgatgagttt taatgcattt ttcagattac gatgcaacct attaagacga taacagcata
    13141 atatgtcaca ctgtccttgt tgaattaatt gtgttatttg tcgataccca ctacgattat
    13201 ctttgcgacc tgattgtttg tcgctataaa agttgatatg ttgaatatga tgtttttcgg
    13261 ctattgcttc gatagcttgt ttctgtgctg caagagattg ttgtttcatc gtactttgac
    13321 gtaaatagcc tatgacttgt ttcatatcgg ctcctccttt cacagtgata atatatattt
    13381 atggatgaat tgatatataa gcccaacatc aatgagatgt tgggcgtcca tattagtcat
    13441 ttgtttgatt gatttcttca attaccaaat cggctaatat ctcgataagt tcatccatgt
    13501 ttttcactcc gttatttgtt ctatcttcaa tacgtcgatt attcagtttg atgcttcaca
    13561 gttgtatgat aaagacaatt agaaatcttc gtgaactcct gaagggccta tcccttcatt
    13621 agcggattta aaaagttctt tcgcagcttt gttatcattt gacggtgtcc aattttgaag
    13681 taacgactta tctttagtta atccgaggat agatgcaaac tctacatcta attttagatg
    13741 gtaaaataca agtgattgtt ttttaccgct attatctttg acacttcttt tagttgtttg
    13801 gcgtccacgg tcagctaata tgaaaccttt atctcttaag gcgttgacaa cattattaac
    13861 atcttgaaat tgatgattgt ttagcatctg tttaaaaacg ttcgcaatta tttttacttc
    13921 gatatggtca tcttttaatg agattaatcc atagttctca aacatatttt tcaaagcacc
    13981 ttcatctgaa aacttacctc tgttttgtgc cacaaattga atgatgacat caatagcttt
    14041 atcagctaat gagcgttcag agactgtatg agtatgataa tcaataaagt agtctcttat
    14101 attagcgata tcaatatctg tagataaaac acgacctaat attttcgcag atgttgtaat
    14161 gactgcataa cgcttaaaca tacgattgcc tgtgttgctt ttatcatctt tcaatttagc
    14221 ttcaaaccaa tctacttcct tgtaaaacca ttgaatgact tcatcttcac gatttataag
    14281 atatttagct actaacggta aaacatgacc atagtttagt gctacagctt ttttaatatt
    14341 gtcagcattg gtcgcatttg tagtgaattg ttcattaatc tcgatggttc tcacacgtaa
    14401 accatcattt tgagcagaat cattaaatat actgtattct gaggttgaaa tcacagatgt
    14461 accccaattc ttaggcgctt taacttctcc gtgtacattg gaacgttgac gaccttgacc
    14521 ttcagcgatg gaatataaca aacccgtggt atctttaagt gtcgtagatg aaagttcatc
    14581 aaatactata ggaacgccat aattgttact caaataacct tcaagtgcgt tacgtgtggc
    14641 attccaactt ctaaaaagag tttcattacc tttggtaggg ttaccagcga ctgatacagc
    14701 taaagcagct gcggttgact taccggttga ggattgacct gtaaaactaa agagaattcc
    14761 tgaaaattcg atttcatgtt tatgcttcag aaaacttgtc actaaggcag aaatcccaaa
    14821 tatgactgtc aattctaaaa gaagatgatc tttaacctcg tcaatataca tgttaaacca
    14881 attatcaaat gttcccctag gtgctaagtc ataagtattc tcacaaatgg cgtcagatgg
    14941 agatttatta tcaaattccg tagtagtata gatttcattt aacgatacaa taggaccaaa
    15001 cggtgtttcc agtataccta ccccttcata taagtaggaa atgggtaatt ggttgcgcat
    15061 ttgttgcaac gcataaccta aatcttttgt atatttttca ttaatactaa atccatattt
    15121 cattaaagag ggcagttttt gtgttgttaa aatatcacta gattcaacaa ttactttttg
    15181 atcctcgtct gtaataatta ctttttcagt gttagtttta gggtcaataa acttattttc
    15241 gataacgata ggacctgcaa tttcaacttc agtaggcatt cctccttttt ctttgggagg
    15301 attgtcttta taccaacctt tttttgattt gtatcgtggt gaaggattaa atgaagggtt
    15361 agtttgattc attagcgagc acctcctttc gaagggtggc taatattatt tgtactgacc
    15421 ttacggtaaa ttaaattacg atttgattta cggttgatta taataacgtt tgcttgagga
    15481 cattttttta cccatgaact ataacgacgt ccaacctctc tttgttcatt aattgaaaga
    15541 tctacattat taaattgtgg catttttatt gccatatttt ttaactcatt aaaagaatac
    15601 tctgtatttg gagataactt cttagtaact atctttacac cttcatatag taattcttgt
    15661 tcgtagcttt tttctttcat tgattaaaca tcctttctta atatgccctt aatttctatg
    15721 actagttctt gttgttcatg ttcagagtat ataaagaaag tactgatctt cctatttaat
    15781 ttttcacatt tgaaatttta gtaaataacc taaaaaaaac agcacaaaca cagtgttgaa
    15841 tgagtgtttg cgctttagaa tcactaattg attaatgtga aactttaatg aatgtttact
    15901 aataaatcgg ttatcagcct attaataaaa aatatataaa ttttttattc acgactactt
    15961 attagttttg atttatagat gtttaaaaaa ttaacgtcat caaataatga a
//
LOCUS       DALPQQ010000058        16000 bp    DNA     linear   BCT 22-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus strain K18-6-464
            SAMD00233528-rid16434743.denovo.058, whole genome shotgun sequence.
ACCESSION   DALPQQ010000058 DALPQQ010000000
VERSION     DALPQQ010000058.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMD00233528
            Sequence Read Archive: DRR236061
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 16000)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 16000)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001543423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001543423.1
            Genome Coverage       :: 77x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/22/2022 17:09:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,811
            CDSs (total)                      :: 2,743
            Genes (coding)                    :: 2,689
            CDSs (with protein)               :: 2,689
            Genes (RNA)                       :: 68
            rRNAs                             :: 2, 4, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 4, 2 (16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 54
            CDSs (without protein)            :: 54
            Pseudo Genes (ambiguous residues) :: 0 of 54
            Pseudo Genes (frameshifted)       :: 27 of 54
            Pseudo Genes (incomplete)         :: 27 of 54
            Pseudo Genes (internal stop)      :: 10 of 54
            Pseudo Genes (multiple problems)  :: 10 of 54
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..16000
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMD00233528-rid16434743.denovo.058"
                     /strain="K18-6-464"
                     /db_xref="taxon:1280"
                     /geo_loc_name="Japan: Niigata"
     gene            459..1625
                     /gene="scpA"
                     /locus_tag="O7798_001483"
     CDS             459..1625
                     /gene="scpA"
                     /locus_tag="O7798_001483"
                     /EC_number="3.4.22.48"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500618.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine protease staphopain A"
                     /protein_id="HDC2863745.1"
                     /translation="MKRNFPKLIALSLIFSLSVTPIANAESNSNIKAKDKKHVQVNVE
                     DKSVPTDVRNLAQKDYLSYVTSLDKIYNKEKASYTLGEPFKIYKFNKKSDGNYYFPVL
                     NTEGNIDYIVTISPKITKYSSSSSKYTINVSPFLSKVLNQYKDQQITILTNSKGYYVV
                     TQNHKAKLVLKTPRLEDKKLKKTESIPTGNNVTQLKQKASVTMPTSQFKSNNYTYNEQ
                     YINKLENFKIRETQGNNGWCAGYTMSELLNATYNTNKYHAEAVMRFLHPNLQGQRFQF
                     TGLTPREMIYFGQTQGRSPQLLNRMTTYNEVDNLTKNNKGIAVLGSRVESRNGMHAGH
                     AMAVVGNAKLDNGQEVIIIWNPWDNGFMTQDAKNNVIPVSNGDHYRWYSSIYGY"
     gene            1656..1982
                     /locus_tag="O7798_001484"
     CDS             1656..1982
                     /locus_tag="O7798_001484"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500619.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="staphostatin A"
                     /protein_id="HDC2863746.1"
                     /translation="MEQIELFSIDKFKCNSEAKYYLNIIEGEWHPQDLNDSPLKFILS
                     TSDDSDYICKYINTEHKQLTLYNKNNSSIVIEIFIPNDNKILLTIMNTEALGTSPRMT
                     FIKHKS"
     gene            complement(2274..2447)
                     /locus_tag="O7798_001485"
     CDS             complement(2274..2447)
                     /locus_tag="O7798_001485"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500620.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NETI motif-containing protein"
                     /protein_id="HDC2863747.1"
                     /translation="MKFKVNENETIADCLSRMKMQGYMPVKRIEKPVFQEQKDGTVEV
                     SHQEIVFVGKKIQ"
     gene            complement(2428..3030)
                     /locus_tag="O7798_001486"
     CDS             complement(2428..3030)
                     /locus_tag="O7798_001486"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500621.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2179 domain-containing protein"
                     /protein_id="HDC2863748.1"
                     /translation="MSFVTENPWLMVLTIFIINVCYVTFLTMRTILTLKGYRYIAASV
                     SFLEVLVYIVGLGLVMSNLDHIQNIIAYAFGFSIGIIVGMKIEEKLALGYTVVNVTSA
                     EYELDLPNELRNLGYGVTHYAAFGRDGSRMVMQILTPRKYERKLMDTIKNLDPKAFII
                     AYEPRNIHGGFWTKGIRRRKLKDYEPEELESVVEHEIQSK"
     gene            complement(3301..4122)
                     /gene="nadE"
                     /locus_tag="O7798_001487"
     CDS             complement(3301..4122)
                     /gene="nadE"
                     /locus_tag="O7798_001487"
                     /EC_number="6.3.1.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500622.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ammonia-dependent NAD(+) synthetase"
                     /protein_id="HDC2863749.1"
                     /translation="MSKLQDVIVQEMKVKKRIDSAEEIMELKQFIKNYVQSHSFIKSL
                     VLGISGGQDSTLVGKLVQMSVNELREEGIDCTFIAVKLPYGVQKDADEVEQALRFIEP
                     DEIVTVNIKPAVDQSVQSLKEAGIVLTDFQKGNEKARERMKVQFSIASNRQGIVVGTD
                     HSAENITGFYTKYGDGAADIAPIFGLNKRQGRQLLAYLGAPKELYEKTPTADLEDDKP
                     QLPDEDALGVTYEAIDNYLEGKPVTPEEQKVIENHYIRNAHKRELAYTRYTWPKS"
     gene            complement(4115..5584)
                     /locus_tag="O7798_001488"
     CDS             complement(4115..5584)
                     /locus_tag="O7798_001488"
                     /EC_number="6.3.4.21"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500623.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nicotinate phosphoribosyltransferase"
                     /protein_id="HDC2863750.1"
                     /translation="MYQLEDDSLMLHNDLYQINMAESYWNDNIHEKMAVFDLYFRKMP
                     FNSGYAVFNGLKRVIDFIEHFGFSESDLEYLKSIGYKDDFLSYLKDLKFTGSIRSMQE
                     GELCFGNEPLLRVEAPLIQAQLIETILLNIVNFHTLITTKASRIRQIASNDKLMEFGT
                     RRAQEIDAALWGARAAYIGGFDSTSNVRAGKLFGIPVSGTHAHAFVQTYGDEYVAFKK
                     YAERHKNCVFLVDTFHTLKSGVPNAIKVAKELGDKINFVGIRLDSGDIAYLSKEARRM
                     LDEAGFTETKIIASNDLDEETITSLKAQGAKVDSWGVGTKLITGYDQPALGAVYKLVA
                     IENEDGSYSDRIKLSNNAEKVTTPGKKNVYRIINKKTGKAEGDYITLENENPYDEQPL
                     KLFHPVHTYKMKFIKSFEAIDLHHNIYENGKLVYQMPTEDESREYLALGLQSIWDENK
                     RFLNPQEYPVDLSKACWDNKHKRIFEVAEHVKEMEEDNE"
     gene            5768..6844
                     /locus_tag="O7798_001489"
     CDS             5768..6844
                     /locus_tag="O7798_001489"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500624.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitric oxide synthase oxygenase"
                     /protein_id="HDC2863751.1"
                     /translation="MLFKEAQAFIENMYKECHYETQIINKRLHDIELEIKETGTYTHT
                     EEELIYGAKMAWRNSNRCIGRLFWDSLNVIDARDVTDEASFLSSITYHITQATNEGKL
                     KPYITIYAPKDGPKIFNNQLIRYAGYDNCGDPAEKEVTRLANHLGWKGKGTNFDVLPL
                     IYQLPNESVKFYEYPTSLIKEVPIEHNHYPKLRKLNLKWYAVPIISNMDLKIGGIVYP
                     TAPFNGWYMVTEIGVRNFIDDYRYNLLEKVADAFEFDTLKNNSFNKDRALVELNYAVY
                     HSFKKEGVSIVDHLTAAKQFELFERNEAQQGRQVTGKWSWLAPPLSPTLTSNYHHGYD
                     NTVKDPNFFYKKKESNANQCPFHH"
     gene            6864..7658
                     /locus_tag="O7798_001490"
     CDS             6864..7658
                     /locus_tag="O7798_001490"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500625.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="prephenate dehydratase"
                     /protein_id="HDC2863752.1"
                     /translation="MQLYYLGPKGTFSYLACRQYFSENEATFQPKSNLFEVIKAVADD
                     DTSIGVVPIENSIEGTINIVADALAQQDVFAHGEIRLDINFALYGNGTDSIPDIKKVY
                     SIAPAISQTTNYIHQHQFDYDYVDSTIQSLTKIENGVAAIAPLGSGEAYGFTPIDTHI
                     EDYPHNVTRFLVIKNQQQFDQNATSLMFLITPMHDKPGLLASVLNTFALFNINLSWIE
                     SRPLKTQLGMYRFFVQADSAITTDIKKVIAILETLDFKVEMIGAFN"
     gene            7734..7841
                     /locus_tag="O7798_001491"
     CDS             7734..7841
                     /locus_tag="O7798_001491"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500626.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDC2863753.1"
                     /translation="MVDFLLFVLFLHDAAVYVSLPLVQAIANVTFYFSF"
     gene            complement(7852..9414)
                     /locus_tag="O7798_001492"
     CDS             complement(7852..9414)
                     /locus_tag="O7798_001492"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500627.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SLC13 family permease"
                     /protein_id="HDC2863754.1"
                     /translation="MAYFNQHQSMISKRYLTFFSKSKKKKPFSAGQLIGLILGPLLFL
                     LTLLFFHPQDLPWKGVYVLAITLWIATWWITEAIPIAATSLLPIVLLPLGHILTPEQV
                     SSEYGNDIIFLFLGGFILAIAMERWNLHTRVALTIINLIGASTSKILLGFMVATGFLS
                     MFVSNTAAVMIMIPIGLAIIKEAHDLQEANTNQTSIQKFEKSLVLAIGYAGTIGGLGT
                     LIGTPPLIILKGQYMQHFGHEISFAKWMIVGIPTVIVLLGITWLYLRYVAFRHDLKYL
                     PGGQTLIKQKLDELGKMKYEEKVVQTIFVLASLLWITREFLLKKWEVTSSVADGTIAI
                     FISILLFIIPAKNTEKHRRIIDWEVAKELPWGVLILFGGGLALAKGISESGLAKWLGE
                     QLKSLNGVSPILIVIVITIFVLFLTEVTSNTATATMILPILATLSVAVGVHPLLLMAP
                     AAMAANCAYMLPVGTPPNAIIFGSGKISIKQMASVGFWVNLISAIIIILVVYYVMPIV
                     LGIDINQPLPLK"
     gene            complement(9619..10716)
                     /locus_tag="O7798_001493"
     CDS             complement(9619..10716)
                     /locus_tag="O7798_001493"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500628.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pectate lyase"
                     /protein_id="HDC2863755.1"
                     /translation="MYINMKDYGLTGINKTKDTRAIQRALNRGRCKPTTVYIPKGTYD
                     ICKPLTIYGNTTLLLDNETILRRCHSGPLLKNGRRFGFYRGYNGHSHIHIKGGKFDMN
                     GVSYPYNNTAMCIGHAEDIQLIGVTIKNVVSGHAIDACGINGLYIKSCSFEGFIDYSG
                     ERFYSEAIQLDIQVPGAFPKFGTTDGTITKNVIIEDCYFGPSELPEMGSWNRAIGSHA
                     SRHNRYYENIHIRNNIFEDIQGYALTPLKYKDAFIINNKFINCEGGIRYLGVRDGKNA
                     ADVMTGKDLGSQAGINMNIIGNEFKGSMSKDAIHVRNYNNVKHKDVLIVGNTFNNSTQ
                     SIHLEDIDTVFLSPVEAGIQVTTINVDEIKK"
     gene            11088..11648
                     /locus_tag="O7798_001494"
     CDS             11088..11648
                     /locus_tag="O7798_001494"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500629.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine hydrolase"
                     /protein_id="HDC2863756.1"
                     /translation="MTHRALLVVDYSYDFIADDGLLTCGKPGQNIEDFIVSRINDFNY
                     YQDHIFFLMDLHYLHDIHHPESKLFPPHNIVDTSGRELYGKVGKLYETIKAQPNVHFI
                     DKTRYDSFFGTPLDSLLRERSINQVEIVGVCTDICVLHTAISAYNLGYKISVPAEGVA
                     SFNQKGHEWALAHFKNSLGAEVEQHV"
     gene            11701..12630
                     /locus_tag="O7798_001495"
     CDS             11701..12630
                     /locus_tag="O7798_001495"
                     /EC_number="3.6.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500630.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="manganese-dependent inorganic pyrophosphatase"
                     /protein_id="HDC2863757.1"
                     /translation="MAKTYIFGHKNPDTDAISSAIIMAEFEQLRGNSGAKAYRLGDVS
                     AETQFALDTFNVPAPELLTDDLDGQDVILVDHNEFQQSSDTIASATIKHVIDHHRIAN
                     FETAGPLCYRAEPVGCTATILYKMFRERGFEIKPEIAGLMLSAIISDSLLFKSPTCTQ
                     QDVKAAEELKDIAKVDIQKYGLDMLKAGASTTDKSVEFLLNMDAKSFTMGDYVTRIAQ
                     VNAVDLDEVLNRKEDLEKEMLAVSAQEKYDLFVLVVTDIINSDSKILVVGAEKDKVGE
                     AFNVQLEDDMAFLSGVVSRKKQIVPQITEALTK"
     gene            complement(12825..12998)
                     /locus_tag="O7798_001496"
     CDS             complement(12825..12998)
                     /locus_tag="O7798_001496"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500631.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDC2863758.1"
                     /translation="MNVVAVNFKWSFELYMLKVENRAMNRVHNNIYNFNHNEKGRKKT
                     KIYTQHRKYFKKM"
     gene            13050..14429
                     /locus_tag="O7798_001497"
     CDS             13050..14429
                     /locus_tag="O7798_001497"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500632.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aldehyde dehydrogenase"
                     /protein_id="HDC2863759.1"
                     /translation="MNIIEQKFYDSKAFFNTQQTKDISFRKEQLKKLSKAIKSYESDI
                     LEALYTDLGKNKVEAYATEIGITLKSIKIARKELKNWTKTKNVDTPLYLFPTKSYIKK
                     EPYGTVLIIAPFNYPFQLVFEPLIGAIAAGNTAIIKPSELTPNVARVIKRLINETFDA
                     NYIEVIEGGIEETQTLIHLPFDYVFFTGSENVGKIVYQAASENLVPVTLEMGGKSPVI
                     VDETANIKVASERICFGKFTNAGQTCVAPDYILVHESVKDDLITALSKTLREFYGQNI
                     QQSPDYGRIVNLKHYHRLTSLLNSAQMNIVFGGHSDEDERYIEPTLLDHVTSDSAIMQ
                     EEIFGPILPILTYQSLDEAIAFIHQRPKPLSLYLFSEDENATQRVINELSFGGGAIND
                     TLMHLANPKLPFGGVGASGMGRYHGKYSFDTFTHEKSYIFKSTRLESGVHLPPYKGKF
                     KYIKAFFKN"
     gene            complement(14549..15577)
                     /locus_tag="O7798_001498"
     CDS             complement(14549..15577)
                     /locus_tag="O7798_001498"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500633.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lactonase family protein"
                     /protein_id="HDC2863760.1"
                     /translation="MTNGYIGSYTKKNGKGIYRFELNENQSRIDLLETGFELEASTYL
                     VRNNEVLYGINKEGEQCGVASLKIDDNGELHLLNKCLSSKAGTGCYVSISEDKRYLFE
                     AVYGAGIIRMYELNTHTGEIIRLIQELAHDFPTGTHERQDHPHAHYINQTPDGKYVAV
                     TDLGADRIVTYKFDDNGFEFYKESLFKDSDGTRHIEFHDNGKFAYVVHELSNTVSVAE
                     YNDGKFEELERHLTIPENFDGDTKLAAVRLSHDQQFLYVSNRGHDSIAIFKVLDNGQH
                     LELVTITESGGQFPRDFNIASSDDLLVCAHEQGDSVVTVFERNKETGKITLCDNTRVA
                     SEGVCVIF"
BASE COUNT         5442 a         2775 c         2318 g         5465 t
ORIGIN      
        1 tttcctagtt tcataatatt tcttcttaca tttcataata tgttttaaaa ttattcgctt
       61 ctaatataac aaattttcta ctcacaaaaa gaatatatat tctattgcat aggtgtggca
      121 ttttaaatat aagacattaa tattgaactc cagaatcgta taaatacgaa actgattata
      181 gaaaaatacg cagagatttt tttaatagta aatttttata gaaagacata aattgactac
      241 gcttctttca aaatcgacta atatattttc atgaaacttt cgatcatatt aattattgaa
      301 tgagatgttt gcaatttagt aaataagcta ctaaattatt acataaactg ataatgtgta
      361 aaaattaatt attttttaaa catagattaa aattttatat tgaaactctt aactaaattt
      421 aatataatta ttttataata aaataaagga gtttttatat gaaaagaaac tttccaaaat
      481 taatagcttt aagtttaata ttttctttaa gtgttacccc tattgcaaac gctgagagca
      541 attcaaatat caaagcaaaa gataagaagc atgtgcaagt taatgtcgag gacaagagtg
      601 ttcctactga cgtacgtaat ttagcgcaaa aagactatct ttcttatgtt acttcacttg
      661 ataaaatcta taataaagag aaagcctcgt atacacttgg tgaacctttt aaaatttata
      721 aattcaacaa aaagagtgat ggtaattatt attttccagt tttgaacact gaaggtaata
      781 tcgattatat agttacaatt tcaccaaaaa tcactaagta ttctagttca tcttctaaat
      841 acacaatcaa tgtttctcca tttttatcta aagtcttaaa tcaatataaa gatcaacaaa
      901 ttactatttt gacaaactca aaaggttact atgtggttac tcaaaatcat aaagctaaac
      961 tagtactaaa aacaccacgt ctagaagata aaaagttaaa aaagactgag agtataccta
     1021 ctggcaataa tgtaacgcaa ctaaagcaaa aagcttctgt cactatgcca actagtcaat
     1081 ttaaaagtaa taattatact tacaacgagc aatatataaa taaacttgag aatttcaaga
     1141 taagagaaac tcaaggtaac aatggttggt gtgcaggcta tacgatgtct gaattactaa
     1201 atgcgactta taatactaac aaatatcatg cagaagctgt gatgagattt ttacacccaa
     1261 acttacaagg acaacgattc caatttactg gtttaacgcc aagagagatg atttattttg
     1321 gacaaactca gggaagaagt ccacaacttc ttaatagaat gactacatat aatgaagttg
     1381 acaatcttac taaaaataat aaaggaattg ctgttttagg tagtagagta gaatcaagaa
     1441 atggtatgca cgcagggcat gccatggcag ttgttgggaa cgctaaatta gataatggac
     1501 aagaggttat aattatatgg aatccatggg ataatggttt tatgactcaa gatgctaaaa
     1561 acaatgttat tccagtatcc aatggcgacc attatcgatg gtattcatct atttatggtt
     1621 attaaaattt gtattttaga aaggtaaata atattatgga acaaattgaa ttatttagta
     1681 ttgataaatt caaatgtaat tcagaggcta agtattatct taatattatt gagggagaat
     1741 ggcatcctca agatttaaat gatagtcctt taaaatttat tctcagtacc tcagacgatt
     1801 ctgattacat ttgcaaatat ataaatacag aacacaaaca actcacatta tataataaaa
     1861 ataatagctc aattgttatt gaaatattta taccaaatga taataaaata ctactaacaa
     1921 ttatgaacac agaagctttg ggaacttctc ctagaatgac tttcattaag cataagtcat
     1981 aagactatct agatatgatt aagtaaacta ttaatcttat taaaggtctc taggaagaaa
     2041 aaatttcatg cgatgagatt gttttagaaa aagcgacgat atatataatc taacaataat
     2101 ttttaaaata ttaagaaccc ccagcatatg ctttatatag cttgctgggg gtttctcata
     2161 caatatggat cgagcatctt gcatgtataa acaaataggc tattcaaagt aaaattactc
     2221 aaactttgaa tagcctttcc tcttcaaata gtctttattt aaattggatt atgttattgg
     2281 attttcttac ctacaaaaac gatttcttga tgtgatactt caaccgtgcc atctttttgc
     2341 tcttgaaaca cgggtttttc aatacgtttt accggcatat acccttgcat tttcattcgt
     2401 gacaaacaat cagcaattgt ttcattctca tttactttga atttcatgtt ctactacact
     2461 ttccagttct tctggttcat aatctttaag ctttctacga cgaatgcctt tagtccagaa
     2521 tccaccatgt atgtttcgag gttcatacgc aatgataaat gctttcggat ctaaattttt
     2581 tatcgtatcc atcaatttac gttcatattt tcttggtgtt aaaatttgca tcaccatacg
     2641 actaccatct ctaccaaacg cagcatagtg cgtaacgcca tatcctaaat ttcgaagttc
     2701 attcggtaaa tctaactcat attctgctga agttacattt acaactgtat aacctaatgc
     2761 cagtttttct tctattttca taccaacaat gatacctatt gaaaaaccaa atgcgtaggc
     2821 aataatattt tgaatatggt ctaaattaga cataaccaaa cctaaaccaa cgatataaac
     2881 taatacttct aaaaaactaa ctgatgcagc aatataacga taacctttca acgttaaaat
     2941 tgttcgcatc gttaaaaacg ttacataaca aacgttaatg ataaatatag ttagtaccat
     3001 taaccatgga ttttctgtta cgaatgacat aaggcgcccc actctctttc aattacactt
     3061 taaataccaa actgcttcaa cctaacctta atgaatgcat attaatataa tatagtacga
     3121 aaactctcat aaataaatag cgaatttgtc ataaataaaa atttattctc aaatgaacat
     3181 acttacttta gttcatacac tttcaattta tacactgaag tagtctagct gaatgtggtt
     3241 taatgttatt aattctaact catatttaat ttaagtcaca cgttagaaga aaaaattaaa
     3301 ttaggatttt ggccacgtgt atcttgtata tgcaagttca cgtttgtgtg catttcgtat
     3361 ataatgattt tcaattactt tttgttcttc tggcgtaact ggcttacctt ctaaataatt
     3421 atcaatcgcc tcataagtta cacctaatgc atcttcatct ggaagctgtg gtttatcatc
     3481 ttctaaatca gcagttggcg ttttttcata taattccttt ggcgcaccaa gatacgctaa
     3541 taattgacga ccttgtcgtt tattcaaacc aaatataggt gcgatatctg cagcaccatc
     3601 accgtacttc gtataaaacc cagttatatt ttcagctgaa tgatctgttc ctactacaat
     3661 accttgtcgg tttgaagcaa ttgaaaattg tactttcata cgttcacgcg ctttttcatt
     3721 tcctttttgg aaatctgtaa gaacaatacc ggcttctttt aatgattgca cactttgatc
     3781 aactgcaggc ttaatattga ctgttactat ttcatctggt tcaatgaatc gcaaagcttg
     3841 ctcaacttca tcagcatctt tttgaactcc ataaggtaat ttaactgcaa taaacgtaca
     3901 atcaatgcct tcttcacgta attcgttaac agacatttgt actagttttc caactaatgt
     3961 agaatcctgt cctcctgaaa tacctaacac taaagatttt ataaatgaat gtgattgtac
     4021 ataatttttt ataaattgct ttaattccat aatttcttca gcactatcga tacgcttttt
     4081 cactttcatt tcttgtacaa taacgtcttg taatttactc attatcttct tccatctcct
     4141 taacgtgttc cgcaacttca aaaatacgtt tatgtttatt atcccaacat gccttgctta
     4201 aatcgactgg atattcttgt ggattcagga aacgcttatt ttcatcccaa atagattgta
     4261 atcctagtgc taaatattca cgtgattcat cttctgttgg catttgatat actaatttac
     4321 cattttcata aatattatga tgcaaatcaa tggcttcgaa agattttata aatttcattt
     4381 tataagtatg cactggatgg aataatttta aaggttgttc atcgtatgga ttttcatttt
     4441 ccaaagtaat ataatcgcct tctgccttac ctgttttctt gtttataatg cgatatacat
     4501 ttttcttacc tggcgtcgta accttttcag cgttatttga taatttaata cgatcactat
     4561 atgaaccatc ttcattttca atagctacaa gtttatatac tgcacctaat gctggttgat
     4621 cgtatcctgt aatcagcttt gtaccaacgc cccaagaatc tacttttgca ccttgtgctt
     4681 tcaaactcgt aatcgtttct tcatccaaat cattagacgc gataatttta gtttcagtaa
     4741 atcctgcttc atcaagcata cgtcttgcct ctttagataa ataagcgata tctccagaat
     4801 ctaatcgaat acctacaaag ttaattttgt cacctaattc ttttgcaact tttattgcat
     4861 ttggcacgcc agattttaaa gtatggaatg tatctactag gaacacacaa tttttatgtc
     4921 tttcagcata ttttttgaag gcaacatatt cgtctccata agtttggaca aatgcatgtg
     4981 catgtgtacc agacacaggt ataccaaata atttccccgc cctaacatta cttgtagaat
     5041 caaagccccc gatgtaagca gctctagcgc cccacaatgc tgcatcaatt tcttgcgcac
     5101 gacgtgtacc aaactccatt aatttatcat ttgatgcaat ttgacgaatt ctgctagcct
     5161 ttgttgtaat taatgtatgg aaatttacaa tgtttaataa aattgtttct attaattgcg
     5221 cttgaatcaa tggtgcttct acgcgtaaca atggttcgtt accaaagcat aattcgcctt
     5281 cttgcatcga acggatgctg cctgtgaatt ttaaatcttt taaatatgat aagaaatcat
     5341 ccttgtagcc aatagacttt aaatattcca aatcagattc tgaaaatcca aaatgttcta
     5401 taaaatcaat gacgcgtttt aaaccattaa aaacagcata gccactatta aatggcattt
     5461 ttctaaaata caaatcaaat acagccattt tttcatgaat attatcattc caataacttt
     5521 cagccatatt tatttgatat aagtcattat gtaacattaa actgtcgtct tctaattggt
     5581 acacttgtat ctctccaatc gacctaaata ttttcttaca ttttatcata attcattttt
     5641 ttatatacat aagagcccct taatttccat acttttaatt aaaatcaacc aacaatttaa
     5701 tgacatatac ataattttta agagtatttt aataatgtag actataatat aaagcgaggt
     5761 gttgttaatg ttatttaaag aggctcaagc tttcatagaa aacatgtata aagagtgtca
     5821 ttatgaaacg caaattatca ataaacgttt acatgacatt gaactagaaa taaaagaaac
     5881 tgggacatat acacatacag aagaagaact tatttatggt gctaaaatgg cttggcgtaa
     5941 ttcaaatcgt tgcattggtc gtttattttg ggattcgtta aatgtcattg atgcaagaga
     6001 tgttactgac gaagcatcgt tcttatcatc aattacttat catattacac aggctacaaa
     6061 tgaaggtaaa ttaaagccgt atattactat atatgctcca aaggatggac ctaaaatttt
     6121 caacaatcaa ttaattcgct atgctggcta tgacaattgt ggtgatcctg ctgaaaaaga
     6181 agttacacgc ttagcaaatc acttaggttg gaaaggaaaa ggtactaatt ttgacgtgtt
     6241 accactgatt taccaattac ctaatgagtc agttaaattt tacgaatatc ctacttcatt
     6301 aattaaagaa gtacctattg aacataatca ttatccaaaa ttaagaaaat tgaacttaaa
     6361 atggtatgca gtccctatca tttccaatat ggacttaaaa atcggtggca ttgtatatcc
     6421 aactgcaccc tttaacggtt ggtatatggt aactgaaatt ggcgtacgta actttattga
     6481 tgattaccgt tacaatttac tagaaaaagt tgcagatgcg tttgaatttg atacacttaa
     6541 aaataattca tttaataaag atcgagcact tgttgaattg aactatgctg tgtatcattc
     6601 ctttaaaaaa gaaggcgtat caattgtcga tcatttgacc gctgcaaagc aattcgaact
     6661 attcgaacgt aacgaagcac aacaaggtcg tcaagttacc ggaaaatggt cttggctagc
     6721 accgccatta tctccaacat tgacgtcaaa ttatcatcac ggatatgaca atacagtaaa
     6781 agatccaaac tttttctata aaaagaaaga atcaaatgct aaccagtgcc ctttccatca
     6841 ttaagttagt agaggtgtag catatgcaat tatattattt aggccctaaa ggtacatttt
     6901 catatttggc ttgtcgtcag tatttttctg aaaatgaagc aacttttcaa ccaaagtcaa
     6961 atttatttga agtcatcaag gcagttgcag atgatgacac atcgattggt gttgtcccta
     7021 ttgaaaattc tatagaagga acaatcaaca ttgtggcaga tgcacttgca cagcaagatg
     7081 tctttgcaca cggtgaaata cgtttagata ttaactttgc attatatggt aatggaacag
     7141 attccattcc tgatattaaa aaagtgtatt ctattgcacc agcaatcagt caaacaacaa
     7201 attacataca tcaacatcaa tttgactatg attatgtcga cagtacaatt caaagtttga
     7261 ctaaaattga aaatggcgtt gcagcaattg cacctttagg tagtggcgaa gcttatggtt
     7321 ttacacctat tgatacacat attgaagact atccacataa cgtgacacgt tttttagtta
     7381 taaaaaatca gcagcaattt gatcaaaatg cgacatcatt gatgttttta attacaccaa
     7441 tgcatgataa acctgggttg ttagcaagtg tgcttaatac atttgctttg tttaatatta
     7501 atttatcctg gattgagtct cgtcctttaa aaacacaatt aggtatgtat cgatttttcg
     7561 ttcaggctga ttctgcaatt acaaccgata taaagaaagt cattgctatt ttagaaacct
     7621 tagatttcaa agtagaaatg attggtgctt ttaattaaac tttattttct aggttctaca
     7681 atttaaataa aataaagagt caaccaagga ttaaaatagg aatccatcct tccttggttg
     7741 actttctttt gtttgtattg tttttacacg atgctgcggt atacgtttcg ttaccactcg
     7801 tccaagcaat tgctaatgta accttttatt tttcgttcta atctgcaatt actatttcaa
     7861 tggcagtggt tgatttatat caatacctaa aactataggc attacataat acacgactaa
     7921 aataataatt attgcactga ttaagtttac ccagaatcct actgatgcca tttgtttgat
     7981 agatatttta ccagaaccaa agataattgc attcggtggt gtccctactg gtaacatgta
     8041 tgcacagtta gccgccatag ctgcaggtgc cataagtagt aatggatgca ctccaacagc
     8101 aacagacaac gttgctaaaa tcggtaaaat catcgttgca gttgcagtat tagatgtcac
     8161 ttcagttaaa aataagacaa agattgttat gacaattaca ataagaatcg gactaacacc
     8221 atttaatgat ttcaactgtt cgcctaacca ttttgctaaa ccactttcag aaataccttt
     8281 cgctaatgct aaaccgccac caaataaaat taatacaccc caagggagct cttttgcaac
     8341 ttcccagtca atgatacggc gatgtttttc agtattttta gctggaataa taaataataa
     8401 tattgatata aaaatagcaa tcgtaccatc tgcaacagat gacgtaactt cccatttttt
     8461 cagaagaaac tctcttgtaa tccataataa gctagcaagt acaaagatag tttgtactac
     8521 cttttcttca tacttcattt tgccaagctc gtctaacttt tgtttaatta acgtctgacc
     8581 accaggtaaa tatttcaaat catgtctaaa cgcaacatat cttaaataga gccaagtaat
     8641 acctaacaaa acaatgaccg ttggaatccc tacaatcatc catttagcaa aactaatttc
     8701 atgtccaaaa tgttgcatgt attgtccttt taaaataatt aatggcgggg ttccgattaa
     8761 tgtacccaag ccaccaatcg tacctgcata gccaattgct aaaactagag atttttcaaa
     8821 cttttgaata cttgtttgat tcgtattggc ttcttgtaaa tcatgtgctt ccttaataat
     8881 tgctaaacca atcggaatca taatcattac agctgcagtg ttcgatacaa acatagataa
     8941 gaatcctgtt gccaccatga atccaagtaa tatttttgaa gtgcttgcac caatcaaatt
     9001 aataattgtc aacgctactc tcgtatgtaa attccatctt tccattgcaa ttgccaaaat
     9061 aaatccacct aaaaacaaaa agataatatc attgccatat tcggatgata cttgttctgg
     9121 tgtaagtata tgacctaatg gtaataacac aattggtaat aagctcgttg ctgcaatagg
     9181 aattgcttca gtaatccacc aagtcgcaat ccataaagta atcgctaaaa catagacgcc
     9241 tttccaaggt aagtcttgtg gatgaaagaa taataatgtt aataggaaaa gtaatggacc
     9301 taatattagt ccaataagtt gtcccgcact aaacggtttc tttttctttg attttgaaaa
     9361 gaatgttaaa taccttttcg atatcattga ttgatgttga ttgaaataag ccataaattt
     9421 ccccctcatg atgattatga caagctactt caactcacta tattagagta tagaaagttg
     9481 tctatcttgt attatcatta ccgtcaaaat acccctttta tcagataatt gggtttatta
     9541 tagcatattt ataccgtttt atgaatgcgc tttcaaaaat tatctactat tcttaatcct
     9601 aatgtcatgc gaaacttttt acttttttat ttcatctaca ttgattgtag taacttgaat
     9661 acccgcttca acaggactta aaaacactgt atcaatatct tctaaatgaa ttgattgagt
     9721 cgaattattg aatgtattcc caacgattaa tacatcttta tgtttaacat tattataatt
     9781 acgtacatgt atcgcatctt tagacattga tcctttaaat tcatttccaa ttatattcat
     9841 atttatgcct gcttgggaac ctaagtcttt tcctgtcatc acatctgctg catttttacc
     9901 atctctaact cctaaatatc taatgccacc ctcacagtta ataaacttat tattaataat
     9961 gaaagcatct ttatacttca agggagttaa tgcataacct tgtatatctt caaatatatt
    10021 atttctaata tgaatattct catagtatcg attatgtcta cttgcatgtg agccaatagc
    10081 acgattccaa cttcccattt cgggcaattc tgaaggtcca aaataacaat cttcgataat
    10141 gacatttttc gttatcgtac catctgtcgt tccgaatttt ggaaaagcac caggtacttg
    10201 aatgtctaat tgtattgctt cagaataaaa gcgttcgcca ctatagtcta tgaatccttc
    10261 aaatgaacag cttttaatat agagtccgtt aatcccacaa gcatcaattg catgaccact
    10321 cactacattc ttaatggtca cacctattaa ttgaatatct tcagcatgcc caatgcacat
    10381 agctgtattg ttataaggat acgatacacc attcatatca aacttgccgc ctttaatatg
    10441 aatatgactg tgtccattat aaccacgata aaaaccaaag cgacgaccat tttttaataa
    10501 aggaccagaa tgacatcggc gtaaaatagt ttcattatct aacaaaagtg ttgtattgcc
    10561 atatatcgtt aatggtttgc aaatatcata cgtccctttc ggtatataaa ctgtcgttgg
    10621 tttacatctt ccacgattta acgcacgttg tattgctcga gtatctttag ttttgtttat
    10681 gcctgttaac ccataatctt tcatattgat atacataaat cgtcatcctt tgtctatttt
    10741 ctaattactc atatattaac caattattca aattataatc gtgttaggtt gatttaacag
    10801 atagtcataa atctcgtgat gccatctatt agcattttta tattcaaaac atcaacactt
    10861 gatattagtt ctaagtttgt cacatttagt attctattac agctatttta aaactatcgc
    10921 aaaaacttct tatattattt gttgattgcg tgatttgctc ttccaaaaaa gttgattaat
    10981 ctatatactt aatctatatt tatatattaa ccattagggt taaaaattac tctagcattt
    11041 atgaatagat gggagtttat tttattatta tataggagag atgttgaatg acacatcgcg
    11101 cactattagt tgttgactat tcatatgact ttatcgcaga cgacggctta ctaacatgcg
    11161 gtaaacctgg acaaaatatt gaagatttta ttgtttctcg tatcaatgac tttaattatt
    11221 atcaagacca tatattcttt ttaatggatt tacattattt acatgacatt catcatcctg
    11281 aaagtaaatt attcccacca cacaatatcg tagatacaag tggtagagaa ttatacggta
    11341 aagtaggtaa attatacgaa acaattaaag cgcaacctaa tgtacatttc attgataaaa
    11401 cgcgctatga ttcgttcttt ggtaccccgc ttgatagttt attgagagaa agaagtatta
    11461 atcaagtcga aatcgttggt gtatgtaccg atatttgcgt gttacataca gcaatttctg
    11521 catacaactt aggttataaa atttcagtac ctgctgaggg agtggcttca tttaatcaaa
    11581 aagggcatga atgggcactt gcacatttca aaaactcatt aggtgcagag gtagaacaac
    11641 acgtttaaat cgtgctaaaa taattataaa gaatacaatt tacaagggag atatttgaca
    11701 atggctaaaa catatatttt cggacataag aatccagaca ctgatgcaat ttcatctgcg
    11761 attattatgg cagaatttga acaacttcga ggtaattcag gagccaaagc ataccgttta
    11821 ggtgatgtga gtgcagaaac tcaattcgcg ttagatacat ttaatgtacc tgctccggaa
    11881 ttattaacag atgatttaga tggtcaagat gttatcttag ttgatcataa cgaattccaa
    11941 caaagttctg atacgattgc ctctgctaca attaagcatg taattgatca tcacagaatt
    12001 gcaaatttcg aaactgctgg tcctttatgt tatcgtgctg aaccagttgg ttgtacagct
    12061 acaattttat acaaaatgtt tagagaacgt ggctttgaaa ttaaacctga aattgccggt
    12121 ttaatgttat cagcaattat ctcagatagc ttacttttca aatcaccaac atgtacacaa
    12181 caagatgtta aagcagctga agaattaaaa gatattgcta aagttgatat tcaaaagtac
    12241 ggcttagata tgttaaaagc aggtgcttca acaactgata aatcagttga attcttatta
    12301 aacatggatg ctaaatcatt tactatgggt gactatgtga ctcgtattgc acaagttaat
    12361 gctgttgacc ttgacgaagt gttaaatcgt aaagaagatt tagaaaaaga aatgttagct
    12421 gtaagtgcac aagaaaaata tgacttattt gtacttgttg ttactgacat cattaatagt
    12481 gattctaaaa ttttagttgt aggtgctgaa aaagataaag ttggcgaagc attcaatgtt
    12541 caattagaag atgacatggc cttcttatct ggtgtcgttt ctcgaaaaaa acaaatcgta
    12601 cctcaaatca ctgaagcatt aacaaaataa tactatatta ctgtctaatt atagacatgt
    12661 tgtatttaac taacagttca ttaaagtaga atttatttca ctttcaatga actgtttttt
    12721 atttacgttt gactaattta caaccctttt tcaatagtag tttttattcc tttagctacc
    12781 ctaacccaca gattagtgat ttctatacaa ttcccctttt gtctttacat tttcttaaaa
    12841 tatttgcgat gttgagtata aatttttgtt ttcttcctac ctttttcgtt atgattaaag
    12901 ttataaatat tattatgtac acgattcatc gctctatttt caactttcaa catatataat
    12961 tcgaaagacc atttaaaatt aacggccaca acattcaaat caattaatcg ctttttccaa
    13021 aataatcata taaggaggtt cttttcatta tgaatatcat tgagcaaaaa ttttatgaca
    13081 gtaaagcttt tttcaataca caacaaacta aagatattag ttttagaaaa gagcaattaa
    13141 agaagttaag caaagctatt aaatcatacg agagcgatat tttagaagca ctatatacag
    13201 atttaggaaa aaataaagtc gaagcttatg ctactgaaat tggcataact ttgaaaagta
    13261 tcaaaattgc ccgtaaggaa cttaaaaact ggactaaaac aaaaaatgta gacacacctt
    13321 tatatttatt tccaacaaaa agctatatca aaaaagaacc ttatggaaca gttttgatca
    13381 ttgcaccatt taactatcct tttcaactag tgttcgaacc tttaatcggt gctattgcag
    13441 caggtaatac ggcaattatt aaaccatctg agttgacgcc taatgttgca cgagtgatta
    13501 aacggttaat caatgaaaca tttgatgcaa attacattga agttattgag ggaggaattg
    13561 aagaaacgca aacgttaatt cacttacctt ttgactatgt cttctttaca ggaagtgaaa
    13621 atgtaggcaa aatcgtttat caagctgcca gcgaaaattt agttcctgtg acattagaaa
    13681 tgggcggtaa atctccagtc atcgttgatg aaacagcgaa tattaaagtt gctagtgagc
    13741 gcatttgttt tgggaaattc actaatgccg gccaaacatg tgttgcacca gattacattt
    13801 tagtacacga atctgtaaaa gatgatttaa tcacagccct atcaaaaacg ttgcgtgaat
    13861 tttatggtca aaatatacaa caaagtccag attatggccg cattgtaaac cttaaacatt
    13921 atcatcgtct gacttcatta cttaacagtg cacaaatgaa tattgtattt ggtggtcata
    13981 gtgatgagga tgaacgttat atagaaccaa cattgttaga tcacgttaca agtgattcag
    14041 caattatgca agaagaaatt tttggtccta tcttaccgat tttaacgtat cagtcattgg
    14101 atgaagcaat agcctttatt caccaaagac caaaaccttt gagtttatat ttatttagcg
    14161 aagatgaaaa tgctacacaa cgtgtaataa acgagctatc atttggcggc ggcgctatta
    14221 atgatacatt gatgcaccta gcgaatccta aattaccatt tggtggtgtt ggcgcctcag
    14281 gtatgggacg ctatcatggt aaatattcat tcgacacttt tacacatgaa aaaagctaca
    14341 ttttcaaatc tacacgatta gaatcaggtg tccatttacc accatataaa ggtaaattta
    14401 aatacatcaa agctttcttt aaaaattaat ttttgagaca aaaataaacc atgcttccat
    14461 aatttgatgt tcttgaaaac aataaatttc aaggtataca caaatttttt ggaaacatgg
    14521 ttttcttttt atcatgatta attaaagatt aaaatatgac acatacacct tcagatgcta
    14581 cacgagtgtt atcacatagc gtaattttac ctgtttcttt atttctttcg aaaacagtta
    14641 caactgaatc tccttgctca tgagcacaaa ctaaaaggtc atctgatgag gcaatattaa
    14701 aatctcttgg gaattgacca ccactttcag taattgttac tagttctaag tgttgaccat
    14761 tatcaagaac tttaaaaatt gcaatgctat catgccctct attagataca tataagaatt
    14821 gttgatcatg agataaacgc actgctgcaa gtttagtatc tccatcaaag ttttcaggaa
    14881 ttgttaaatg acgctcgagc tcttcaaatt taccgtcatt atattctgca acactcacag
    14941 tatttgataa ttcgtgtacg acataagcaa attttccatt atcatgaaat tcaatatgtc
    15001 ttgtcccatc actatcttta aataaagatt ctttataaaa ttcaaacccg ttgtcatcaa
    15061 atttataagt aacgatacga tcagcaccta aatctgttac tgcaacgtac ttaccatctg
    15121 gagtttgatt aatataatgt gcgtgtggat gatcttgtct ttcatgtgta cctgttggaa
    15181 aatcatgtgc aagttcttga attagacgta taatttcacc tgtgtgcgta tttaattcat
    15241 acatacgtat gatgccagca ccatataccg cttcaaataa atatcgttta tcttctgaaa
    15301 tcgatacata acaacctgta ccagcttttg aagacaaaca tttatttaat aaatgcaatt
    15361 caccattgtc atcaattttc aaacttgcaa caccgcattg ttctccttct ttgttgattc
    15421 catataaaac ttcattatta cgcaccaaat atgtagacgc ttctaattca aatcctgttt
    15481 ctaataaatc aatacgtgac tgattttcgt ttaattcaaa acgataaatc cctttaccat
    15541 tctttttagt gtaagaacca atatatccat ttgtcattac ttttacccct ccatgttagt
    15601 cttattttca ttttattaaa ttttagctag aattaacaat catttatcat ttccttaaag
    15661 ctaaaactat ttaactactt taaaagaact atttgctgtg atatgtcatt attcgatttt
    15721 aattaatccc tcttttttac ttacacgagc attaattatt aacgcgttta tgcttccaca
    15781 aaatttttgt tgcaaaatag aacacatgtt cgtataatgt aattatcaga ttggggtgaa
    15841 ttaaggatga caagttatga agaagaaact gattatcgta acgttccaag agaattacta
    15901 gataacaata tacctatggg aagaggcatg attaaatggg ctccttttat tatatgtact
    15961 aatctcataa aaaatctatt ttaatagggc tcaaacataa
//
LOCUS       DALPQQ010000059        15470 bp    DNA     linear   BCT 22-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus strain K18-6-464
            SAMD00233528-rid16434743.denovo.059, whole genome shotgun sequence.
ACCESSION   DALPQQ010000059 DALPQQ010000000
VERSION     DALPQQ010000059.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMD00233528
            Sequence Read Archive: DRR236061
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 15470)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 15470)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001543423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001543423.1
            Genome Coverage       :: 77x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/22/2022 17:09:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,811
            CDSs (total)                      :: 2,743
            Genes (coding)                    :: 2,689
            CDSs (with protein)               :: 2,689
            Genes (RNA)                       :: 68
            rRNAs                             :: 2, 4, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 4, 2 (16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 54
            CDSs (without protein)            :: 54
            Pseudo Genes (ambiguous residues) :: 0 of 54
            Pseudo Genes (frameshifted)       :: 27 of 54
            Pseudo Genes (incomplete)         :: 27 of 54
            Pseudo Genes (internal stop)      :: 10 of 54
            Pseudo Genes (multiple problems)  :: 10 of 54
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..15470
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMD00233528-rid16434743.denovo.059"
                     /strain="K18-6-464"
                     /db_xref="taxon:1280"
                     /geo_loc_name="Japan: Niigata"
     gene            203..919
                     /locus_tag="O7798_001499"
     CDS             203..919
                     /locus_tag="O7798_001499"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499234.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YebC/PmpR family DNA-binding transcriptional
                     regulator"
                     /protein_id="HDC2863761.1"
                     /translation="MGRKWNNIKEKKAQKDKNTSRIYAKFGKEIYVAAKSGEPNPESN
                     QALRLVLERAKTYSVPNHIIEKAIDKAKGAGDENFDHLRYEGFGPSGSMLIVDALTNN
                     VNRTASDVRAAFGKNGGNMGVSGSVAYMFDHVATFGIEGKSVDEILETLMEQDVDVND
                     VIDDNGLTIVYAEPDQFAVVQDALRAAGVEEFKVAEFEMLPQTDIELSEADQVTFEKL
                     IDALEDLEDVQNVFHNVDLK"
     gene            919..1392
                     /locus_tag="O7798_001500"
     CDS             919..1392
                     /locus_tag="O7798_001500"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499235.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cupin domain-containing protein"
                     /protein_id="HDC2863762.1"
                     /translation="MKSAEQWIDELQLESHPEGGFYRETIREVLKDGRRAPFSSIYFL
                     LTDDNISHFHRIDADEVWYYHAGDSLTIHMINPDGEYTTATLGTDIQNGDVLQYVVPK
                     GTIFASSIEISNTFSLVGCMCQPAFEFKQFELFKQSELITQYPHLKSVIEKYALK"
     gene            1484..1600
                     /locus_tag="O7798_001501"
     CDS             1484..1600
                     /locus_tag="O7798_001501"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499236.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDC2863763.1"
                     /translation="MLQLFLMKIALNDFENDKSVLFIFLKNHFYEEMCVLSN"
     gene            1745..2389
                     /locus_tag="O7798_001502"
     CDS             1745..2389
                     /locus_tag="O7798_001502"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499237.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF402 domain-containing protein"
                     /protein_id="HDC2863764.1"
                     /translation="MKVKYIDKRHWRRLIDREYTEVKVNNNRFKGIIGLVTMKKVRDP
                     LEVTVVGQNIIVADDNYKWLQILPEKKRYSITVMFDNKGNPLEYYFDINIKNITQKGN
                     ARTVDLCLDVLALPSGEYELVDEDDLMFALESEQITKKQFHEAYMIAHQIMAELENDF
                     KGFQKKIMYCFNKINAKAQKNHQKPQNKTNIEKSKQIKPKQYNQTKNHQQQKKN"
     gene            2505..3371
                     /locus_tag="O7798_001503"
     CDS             2505..3371
                     /locus_tag="O7798_001503"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499238.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HDC2863765.1"
                     /translation="MKIEDYRLLITLDETKTLRKAAEILYISQPAVTQRLKAIENAFG
                     VDIFIRTKKQLITTTEGTMIIEHARDMLKRERLFFDKMQAHIGEVNGTISIGCSSLIG
                     QTLLPEVLSLYNAQFPNVEIQVQVGSTEQIKANHRDYHVMITRGNKVMNLANTHLFND
                     DHYFIFPKNRRDDVTKLPFIEFQADPIYINQIKEWYNDNLEQDYHATITVDQVATCKE
                     MLISGVGVTILPEIMMKNISKEQFEFEKVEIDNEPLIRSTFMSYDPSMLQLPQVDSFV
                     NLMASFVEQPKA"
     gene            3779..4999
                     /locus_tag="O7798_001504"
     CDS             3779..4999
                     /locus_tag="O7798_001504"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499240.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sugar efflux transporter"
                     /protein_id="HDC2863766.1"
                     /translation="MDMFAALLQIKNYKLFVANMFLLGMGIAVTVPYLVLFATKDLGM
                     TTNQYGLLLASAAISQFTVNSIIARFSDTHHFNRKIIIILALLMGALGFSIYFFVDTI
                     WLFILLYAIFQGLFAPAMPQLYASARESINVSSSKDRAQFANTVLRSMFSLGFLFGPF
                     IGAQLIGLKGYAGLFGGTISIILFTLVLQVFFYKDLNIKHPISTQQHVEKIAPNMFKD
                     KTLLLPFIAFILLHIGQWMYTMNMPLFVTDYLKENEQHVGYLASLCAGLEVPFMIILG
                     VLSSRLQTRTLLIYGAIFGGLFYFSIGVFKNFYMMLAGQVFLAIFLAVLLGIGISYFQ
                     DILPDFPGYASTLFSNAMVIGQLGGNLLGGAMSHWVGLENVFFVSAASIMLGMILIFF
                     TKNQKITKEDVIST"
     gene            4996..5484
                     /locus_tag="O7798_001505"
     CDS             4996..5484
                     /locus_tag="O7798_001505"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499241.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF456 domain-containing protein"
                     /protein_id="HDC2863767.1"
                     /translation="MTIILWLLIIAAFMLAFVGLIKPIIPSVLVLWVGFLIYQFGFHN
                     QHLSWVFYVSMALLTILILCADFLANKYFVNRFGGSKFGEYAALIGVVIGCFVLPPFG
                     IIIIPFILVFIVELIQGYSFERAVKVSIGSIVAFLTSSIAQAIIMFIMIVWFFIDALL
                     IN"
     gene            complement(5583..6272)
                     /locus_tag="O7798_001506"
     CDS             complement(5583..6272)
                     /locus_tag="O7798_001506"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499242.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1129 family protein"
                     /protein_id="HDC2863768.1"
                     /translation="MKSTAQLTKENNVKSLRLSNTDREIFENYMTYMRSDFRVNPHDT
                     ELIINRILKQLLSAEQHGLLALDFFNHDPKAHAIKELKAMPNETFKNIFKYIYQHIVL
                     LIGIVSFLKGFLGFFMEKNGSNLYFVSFPFSVVVGFFIVFLFIWFSFKTIQLQCFNNS
                     NWIWIFTYLAIILLIVGFFYVFFIPQSLLAFGPYIQVSNWVFIIFSFIVMPIGLRIER
                     NISKKHSHTFL"
     gene            6399..6842
                     /locus_tag="O7798_001507"
     CDS             6399..6842
                     /locus_tag="O7798_001507"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499243.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HDC2863769.1"
                     /translation="MRTLNKDEHNYIKQIANIHETLLSQVESNYKCTKLSIALRYEMI
                     CSRLEHTNDKIYIYENEGQLIAFIWGHFSNEKSMVNIELLYVEPQFRKLGIATQLKIA
                     LEKWAKTMNAKRISNTIHKNNLPMISLNKDLGYQVSHVKMYKDID"
     gene            6909..7304
                     /locus_tag="O7798_001508"
     CDS             6909..7304
                     /locus_tag="O7798_001508"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499244.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDC2863770.1"
                     /translation="MKKLIISIMAVMLFLTGCGKSQEKATLEKDIDNLQKENKELKDK
                     KEKLQQEKEKLADKQKDLEKEVKDLKPSKEDNKDDKKDEDKNKDKDKDKEASQDKQSK
                     DQTKSSDKDNHKKPTSADKDQKANDKHQS"
     gene            7442..7741
                     /locus_tag="O7798_001509"
     CDS             7442..7741
                     /locus_tag="O7798_001509"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499245.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDC2863771.1"
                     /translation="MHEQDFRILEGQDITLPELGRELENITGHTIADSTGEIKRVIAH
                     LPNFESDTDTFVATYRLNHQQDFIDATFTALKSDRARLKEVPVHVELISYISKSK"
     gene            7821..8363
                     /locus_tag="O7798_001510"
     CDS             7821..8363
                     /locus_tag="O7798_001510"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499246.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HDC2863772.1"
                     /translation="MIYCETERLILRDWHEDDLLPFQKMNANYDVRKYFPSLLSYRRS
                     ELDMRTMDAVIKDYGIGLFAVEDKESHQWIGFIGLNYIPETSDYPFKELPLYEIGWRL
                     LPEFWGKGLATEGAKATLKLAEEHQIYDVYSFTAEANKASQRVMEKIGMTVYDHFELP
                     NLSKYHLLKRQVRYYINLRK"
     gene            complement(8459..9025)
                     /locus_tag="O7798_001511"
     CDS             complement(8459..9025)
                     /locus_tag="O7798_001511"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499247.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR00730 family Rossman fold protein"
                     /protein_id="HDC2863773.1"
                     /translation="MKRIAVYCGASKGHDPSYVQKAYDLGKYFAEQGYELVFGAGSIG
                     IMGAIQDGVLDHGGKAIGVMPKMLDEHEITSQRLTELILVDSMHERKNKMAELADAFV
                     MAPGGAGSLEEFFEMYSWAQIGIHEKPIAIYNINGFFNPLQTMIDHMIEEGFIDPKYR
                     ALAPLCDTKESLIESILNFKPLGTRSYD"
     gene            complement(9027..9485)
                     /locus_tag="O7798_001512"
     CDS             complement(9027..9485)
                     /locus_tag="O7798_001512"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499248.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YaiI/YqxD family protein"
                     /protein_id="HDC2863774.1"
                     /translation="MTHIIIDGDACPVVDSIIDLTTETGIFVTIIRSFSHFSNQLYPP
                     HVSTLYVDDGPDAVDYKIVQLSTKDDIVVTQDYGLASLLVDKVLIVMHHNGKIYNSKN
                     IQQLLDKRYMNAQIRKQGGRHKGPPPFTKQDQKVFEQSLLKVIHRIKELD"
     gene            complement(9488..10171)
                     /locus_tag="O7798_001513"
     CDS             complement(9488..10171)
                     /locus_tag="O7798_001513"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499249.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDC2863775.1"
                     /translation="MDKKKVIKFMINVLPIVLVPLIVERKRIKQHPDVQKVTDATSKV
                     ASKTSAAISNTASDVKEYVGDKKQDFENKRELKKFAREHDPAYIEKKGEKLAKQNRKD
                     ADKMNKILQKNIEKRHKEEQKAREKNEIQRIKDMKKSQKYEEKAGLTPNKLDEKTEKK
                     GDKLAEKNRKEIAKMNKKLQKNIEKRHKEEQKRQQEADKARIKSFKKYKDYVAKSASQ
                     QNKENNTEA"
     gene            complement(10343..11218)
                     /locus_tag="O7798_001514"
     CDS             complement(10343..11218)
                     /locus_tag="O7798_001514"
                     /EC_number="3.6.1.27"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499250.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="undecaprenyl-diphosphate phosphatase"
                     /protein_id="HDC2863776.1"
                     /translation="MFIIELIKGIILGVVEGLTEFAPVSSTGHMILVDDMWLKSSEFL
                     GSQSAFTFKIVIQLGSVFAAAWVFRERFLEILHIGKHKHVEGDNDQQRRSKPRRLNLL
                     HVLVGMVPAGILGLLFDDFIEEHLFSVPTVMIGLFVGAIYMIIADKYSAKVKNPQTVD
                     QISYFQAFVIGISQAVAMWPGFSRSGSTISTGVLMKLNHKAASDFTFIMAVPIMLAAS
                     GLSLLKHYQDIQIADIPFYILGFLAAFTVGLIAIKTFLHLINKIKLIPFAIYRIVLVI
                     FIAILYFGFGIGKGI"
     gene            11437..13068
                     /locus_tag="O7798_001515"
     CDS             11437..13068
                     /locus_tag="O7798_001515"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499251.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein/permease"
                     /protein_id="HDC2863777.1"
                     /translation="MKKLTTILFQYKIFPVLMFLVSTGLGIIVITQNILIADFLAKII
                     RHQFQGLWIVLFILLGVLLLRATVQFLNQWLGDTLAFKVKHMLRQRVIYKNNGHPIGE
                     QMTILTENIDGLAPFYKSYLPQVFKSMMVPLIIIIAMFFIHFNTALIMLITAPFIPLF
                     YIIFGLKTRDESKDQMTYLNQFSQRFLNIAKGLVTLKLFNRTEQTEKHIYDDSTQFRT
                     LTMRILRSAFLSGLMLEFISMLGIGLVALEATLSLVVFHNIDFKTAAIAIILAPEFYN
                     AIKDLGQAFHTGKQSEGASDVVFEFLEQPNYNNEFLLKYEENQKPFIQLTDISFRYDD
                     SDRLVLNDLNLEIFKGDQIALVGPSGAGKSTLTHLIAGVYQPTIGTISTNQRDLNIGI
                     LSQQPYIFSASIKENITMFKDIENNTIEEVLDEVGLLDKVQSFTKGINTIIGEGGEML
                     SGGQMRRIELCRLLVMKPDLVIFDEPATGLDIQTEHMIQNVLFQHFKDTTMIVIAHRD
                     NTIRHLQRRLYIENGRLIADDRNISVNITENGDDL"
     gene            13065..14738
                     /locus_tag="O7798_001516"
     CDS             13065..14738
                     /locus_tag="O7798_001516"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499252.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter ATP-binding/permease
                     protein"
                     /protein_id="HDC2863778.1"
                     /translation="MKTRLKFQVDKDLLLAIVVGVCGSLVALAMFFLSGYMVTQSALG
                     APLYALMILVVTVKLFGFLRAITRYVERLISHKATFTMLRDIRVQFFGKLVNVIPNVY
                     RKLSSSDLISRMISRVEALQNIYLRVYYPPVVIGLTALVTVIVLAFISIGHALLIMVS
                     MLFTLLIVPWLSSKKARTLKKHAANEQARFLNHFYDYKAGMDELRRFNQINHYRDNLM
                     AKLNHFDKLQLKEQRFLTIYDFILNIIAMLSIFGSLVLGLIQINAGQLNIIYMTSIVL
                     MVLTLFEQAVPMTNVAYYKADTDQALHDINEVISVPSTNGKKRLNDKYDATNIYEVKD
                     ASFKYWNQQTYVLSDINFNVNRGEKIAIVGPSGSGKSTLLQIMAGLYQLDSGSVRFEN
                     MDMFEIDDKDKFESLNVLLQSQQLFDGTIRQNLFTDEKDEAVQAIFKQLDLEHLALER
                     QIDLDGHTLSGGEIQRLAITRMLLKDTASTWILDEPTTALDKQNSLKVMDLIEAHAET
                     LIVATHDLTLLSRFETIIVMINGKIVEKGNYQQLLANQGALWNMIQYNA"
     gene            complement(14865..15308)
                     /gene="mgrA"
                     /locus_tag="O7798_001517"
     CDS             complement(14865..15308)
                     /gene="mgrA"
                     /locus_tag="O7798_001517"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499253.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HTH-type transcriptional regulator MgrA"
                     /protein_id="HDC2863779.1"
                     /translation="MSDQHNLKEQLCFSLYNAQRQVNRYYSNKVFKKYNLTYPQFLVL
                     TILWDESPVNVKKVVTELALDTGTVSPLLKRMEQVDLIKRERSEVDQREVFIHLTDKS
                     ETIRPELSNASDKVASASSLSQDEVKELNRLLGKVIHAFDETKEK"
BASE COUNT         5362 a         2185 c         2692 g         5231 t
ORIGIN      
        1 tttaaatatt taattgaaat tgagtgtcga aagcatagaa tttgcttatc ggcacatttt
       61 taatttatac atattttaaa actaagtaac agtttgaaga aatcgtagtt caataatgtt
      121 aattgtgaaa atgtatataa acataaaaaa atcatgtata atatatgttg ttaattaaac
      181 agttcgaaag cgagatgaca ttatgggacg taaatggaat aacattaaag aaaaaaaggc
      241 ccaaaaagat aaaaacacaa gtagaatata tgcgaaattt ggtaaggaga tttatgttgc
      301 agcaaaatct ggtgaaccca atccagaatc taaccaagct ttaaggttgg tgcttgaacg
      361 cgctaagaca tattcagtgc cgaatcatat tattgaaaaa gcaatagata aagctaaggg
      421 tgctggagac gaaaactttg atcacctaag atatgaagga tttggcccaa gcggatcaat
      481 gctaattgtt gatgcgttaa caaataatgt aaatcgtact gcctctgatg tgcgagctgc
      541 ttttggtaaa aacggcggta atatgggtgt atctggatca gttgcttata tgtttgatca
      601 tgtggcaaca tttggtattg aaggaaagtc tgttgacgaa atacttgaaa cattaatgga
      661 acaagatgta gatgtaaatg atgtgattga cgataatgga ttgacaatag tctatgctga
      721 accagatcaa tttgcagtcg ttcaagatgc gcttcgtgca gcaggtgttg aagaatttaa
      781 agttgctgaa tttgaaatgt tacctcaaac agatattgaa ctttctgaag cggaccaagt
      841 aacatttgaa aaattaatcg atgcattaga agatttagaa gatgtacaaa acgtattcca
      901 taatgtggat ttgaaataat gaaatcagca gaacaatgga ttgatgaatt gcaacttgaa
      961 tcacatcctg aaggtggttt ctatagagag acaattcgag aagtattgaa agatggacgc
     1021 agagcgccgt ttagtagtat ttatttttta cttacagatg acaatatttc gcattttcat
     1081 cgaattgatg ctgatgaagt atggtactat catgctggcg attctctaac aattcatatg
     1141 ataaatccgg atggggaata tacgactgca acattgggta ctgatatcca aaatggagat
     1201 gtattgcaat atgtagtgcc taaaggaaca atttttgctt cttcaatcga aatatcaaat
     1261 acttttagtt tagtaggttg tatgtgtcaa ccggcatttg agtttaagca gtttgaattg
     1321 tttaagcaat ctgaattaat tacgcaatat ccgcatctta aatcagtaat cgaaaaatat
     1381 gctttaaaat aaaagtgatc aatgaagtgg tttgaaggtt gttaataaac ctttgagtca
     1441 cttcattttt atatgtattc ttgattgaat cagaatagat ttgatgcttc agctgttttt
     1501 aatgaaaata gcattaaatg attttgaaaa cgataagagt gtgttattta tatttttgaa
     1561 aaatcacttt tatgaagaaa tgtgtgtact atctaattaa tattgtctat tttaagtaaa
     1621 ttgaagcgag ttgtagtaaa ataataataa atattttcat atgattaaca aaaactataa
     1681 aactgtatca tgacatgaca tcatttatgt agttttatat aataatgaca aggagttggt
     1741 gactgtgaaa gtaaagtata tagataaacg tcactggcgt cgcctaattg atagggaata
     1801 cacagaggta aaagttaata ataataggtt taagggtatt ataggcttag tcacgatgaa
     1861 aaaggttcgt gatcctttag aggtgacggt agttggacaa aatatcattg tcgcagatga
     1921 caattataaa tggttgcaaa tactacctga aaagaaacgt tatagtataa ctgtaatgtt
     1981 tgataataaa ggcaatccat tagaatatta ttttgatata aatatcaaaa atataacgca
     2041 aaaaggtaat gcgcgtacag tagatttatg tttagatgtt ttagcattac caagtggtga
     2101 atatgagttg gtagatgaag atgatttaat gtttgcatta gaaagtgagc aaattacaaa
     2161 aaagcaattt catgaagcat atatgattgc acatcaaatt atggcagagt tagaaaatga
     2221 ttttaaagga ttccaaaaga aaatcatgta ctgctttaat aaaattaatg caaaggctca
     2281 aaaaaatcat caaaagccac aaaataaaac taatattgaa aaaagcaaac aaataaagcc
     2341 taagcaatat aatcaaacta aaaatcacca acaacaaaag aaaaactaag taattcaagc
     2401 tgcagccata ccaataaaat tggtgaaatt attcgttagt aatgaactca tgaatgcttg
     2461 tagccatgaa agttcaataa ttgaataatt tatgggggga aattatgaag attgaagact
     2521 atcgtttact aataacatta gacgaaacga aaacgttacg taaagcggct gaaattttat
     2581 atatatctca acctgctgtt acacaaagac taaaagctat tgaaaatgct tttggagtag
     2641 atatttttat cagaacaaaa aaacaattga ttacaacaac tgaaggaaca atgattattg
     2701 agcatgctcg tgacatgttg aaaagagagc gattattttt tgacaaaatg caggcacata
     2761 ttggtgaagt gaatggaaca atatcaatcg ggtgttcttc tttgattgga caaaccttac
     2821 ttcctgaagt tttgagccta tataatgccc aatttcctaa tgttgaaata caagtgcaag
     2881 ttggttcaac tgaacaaatt aaagcaaatc atagagatta tcatgttatg ataactcgtg
     2941 gaaataaggt aatgaattta gctaacacac atttatttaa tgatgatcat tattttattt
     3001 ttccaaaaaa tagacgagat gatgttacaa agttaccatt tatagagttt caagctgatc
     3061 cgatttatat aaatcaaata aaagaatggt ataacgataa tttagaacaa gattaccatg
     3121 caactattac agtggatcaa gtagcaactt gcaaagaaat gttgattagt ggtgtaggtg
     3181 ttacaatctt gccagaaatt atgatgaaaa atatcagcaa agaacaattt gagtttgaaa
     3241 aagtagaaat tgataatgaa ccgctgattc gttcgacatt tatgagttat gatccgagca
     3301 tgttgcaatt gccacaagtt gattcttttg taaatctcat ggcgagcttt gttgaacaac
     3361 caaaggcgta gttttagact aatttaaggt ttgtatttaa ttttaaacta ttcggttaaa
     3421 ttgaacgtag ttggttgcta atgcaccaac agcaaaagag cccctaatta ataaattaaa
     3481 aggggacaaa ggaatacagt tggttgctaa tgcaccaact gcataagagc ccctaattaa
     3541 taaattaaaa ggggacaaag gaatacagtt ggatgctaac gcaccaactg cataagagcc
     3601 cctaattaat aaattaaaag gggacaaagg aatacagttg gatgctaacg caccaactgc
     3661 ataagagccc ctaattaata aattaaaagg ggacaaagga atacagttgg atgctaacgc
     3721 accaactgca taagagcccc taattaataa attaaaaggg gctctaagaa gcggggttat
     3781 ggatatgttt gcagcgttat tacaaataaa gaattataaa ctctttgttg ctaatatgtt
     3841 tctactaggt atgggtattg cggttacggt cccatatctt gttctttttg caactaaaga
     3901 tttaggtatg acaacaaatc agtatggatt acttctagca tctgcagcga ttagccagtt
     3961 tacagtaaat tcaattattg ctagattttc ggatacgcat cactttaata gaaaaattat
     4021 tattattctc gcattattaa tgggtgcgct tggtttttca atatactttt ttgtagatac
     4081 aatctggtta ttcatattac tatatgcgat tttccaagga ttatttgcac cagcaatgcc
     4141 ccaactttac gcatctgcta gagaatctat caatgtttca agctctaaag atagagctca
     4201 atttgccaac acagtattac gttcaatgtt ctcattgggc tttttatttg gtccatttat
     4261 tggtgcccaa ttaatcggat taaaaggcta tgctggattg tttggtggaa caataagtat
     4321 cattttattt actttagtac ttcaagtgtt tttctataag gatttaaaca ttaaacaccc
     4381 tattagtacg caacaacatg ttgaaaaaat tgctcctaat atgtttaaag acaaaacgct
     4441 tttattacca tttattgcat ttattttatt acacattgga caatggatgt atacgatgaa
     4501 tatgccttta tttgttactg attatttaaa agaaaatgaa caacatgtcg gttatttagc
     4561 tagtttatgt gctggtttag aagtgccatt tatgatcatt cttggcgttt tatcatctag
     4621 attacagact cgaacattgt tgatttatgg agcgattttt ggtggtttat tctacttcag
     4681 cattggggta tttaaaaact tctatatgat gttagcagga caggtgtttt tagctatttt
     4741 cttagcggtt cttttaggaa ttggtattag ttatttccaa gatatcttac cagattttcc
     4801 aggatacgct tcaacactat tttctaatgc aatggttatt ggacagttag gcggtaacct
     4861 attaggtggt gctatgagtc actgggtagg tttggaaaat gtattttttg tatcagcagc
     4921 atcaatcatg ttaggtatga tacttatatt ctttactaaa aatcaaaaaa ttacaaaaga
     4981 ggatgtgata tcaacatgac aattatttta tggctactta tcatcgctgc cttcatgtta
     5041 gcatttgttg ggttgattaa gccgattatt ccttctgttt tagtattatg ggttggcttt
     5101 ttaatctatc aatttggctt tcataatcag catttatcat gggtgtttta tgtatctatg
     5161 gcattgctaa caatattaat tttatgtgcc gactttttag ctaataaata ttttgtgaat
     5221 cgcttcggtg gttctaagtt tggagagtat gcagctttaa ttggtgtggt tattggatgt
     5281 tttgttttac cgccatttgg aattattatt atacctttta ttttggtatt catagttgaa
     5341 ttaatacaag gctattcatt tgaaagagca gttaaagtaa gtataggttc aatcgtagca
     5401 tttttaacaa gtagtatagc tcaagcaatc attatgttta taatgattgt atggttcttt
     5461 atagatgctt tattgattaa ttaataaaaa gcttattgca aaatatgttt ttcggtaact
     5521 gtaatttagt gattttatca ttaacagtac caaattcgca tatgatgtaa taagcttttt
     5581 gtttataaaa atgtatgaga atgttttttc gaaatatttc tttcaatgcg taatccaata
     5641 ggcataacta taaatgaaaa tataataaat acccaattgc ttacctgaat atatggtcca
     5701 aaggcaagta atgattgtgg aataaagaat acatagaaaa atcctacaat tagtagaatg
     5761 attgctaaat aggtgaatat ccatatccaa tttgaattgt taaaacactg cagttgtatt
     5821 gttttaaaac taaaccatat aaataaaaag acaataaaga atccaacgac tactgaaaac
     5881 gggaatgaaa caaaatataa attacttcca tttttttcca tgaaaaatcc taaaaatcct
     5941 ttgagaaaac taacaatccc aattaataga acgatgtgtt gatagatata tttaaaaata
     6001 tttttaaatg tttcattagg catcgctttt agttctttta ttgcatgtgc ttttgggtcg
     6061 tgattgaaaa aatctaaggc taataaacca tgttgttctg cgcttaataa ttgtttgagt
     6121 atacggttaa taattaactc tgtatcatga gggttgacgc gaaagtcaga gcgcatataa
     6181 gtcatataat tctcgaagat ttctctatca gtattgctta atcttaatga tttaacatta
     6241 ttttcttttg ttaattgcgc agtacttttc attgttactt aagcgctcct ttaaaaatgt
     6301 ttaattccaa attaaaatgg aaatgatttt atagtattaa taaggtcaat catatcatat
     6361 taaacgcata aatataacga ttaatattgg agaggaaaat gaggacactt aataaagatg
     6421 aacataatta tatcaagcaa atagctaata tacatgagac attattgtcg caagtagaat
     6481 ccaactataa atgtactaaa ctgagtattg ctcttaggta cgagatgata tgttcaagat
     6541 tagaacatac aaatgataaa atttatatat atgaaaatga aggtcaatta atagcgttta
     6601 tttggggaca ttttagtaat gaaaaaagta tggttaacat tgaactgcta tatgttgaac
     6661 cacaatttcg caaactggga atagctacgc aactgaagat tgcgcttgaa aaatgggcaa
     6721 aaactatgaa tgcaaagcga ataagcaata caattcataa aaataatttg ccaatgatat
     6781 ctttgaataa agatttaggt tatcaagtga gtcatgtgaa aatgtataaa gatattgatt
     6841 agaattagga ttatgttgct aattcatgtt aaaattaaaa aagatttaat gacgttaagg
     6901 agttttatat gaagaaatta atcatcagta ttatggcggt catgctattt ttaacaggtt
     6961 gtggtaaaag tcaagagaaa gccactctgg aaaaggatat cgataattta caaaaagaaa
     7021 ataaagaatt aaaagacaaa aaagaaaagc ttcaacaaga aaaagaaaaa ttagcagata
     7081 agcaaaaaga ccttgaaaaa gaagtgaaag atttaaaacc ttcaaaagaa gataacaagg
     7141 atgataaaaa agacgaagac aaaaataaag acaaagataa agataaagag gcatcacaag
     7201 ataagcaatc aaaagatcaa actaagtcat cggataaaga taatcacaaa aagcctacat
     7261 cagcagataa agatcaaaaa gctaatgaca aacaccaatc ataatcgaat tgcttacttg
     7321 ttatagatga aaggtacagc gttttaaacc ttattttaag ggtatgtatt aattaaaatg
     7381 tggtcatgat tgaaacagaa cgtaaaaata gacaacgtaa ttaataaagg agagaaacgg
     7441 catgcatgaa caagatttta gaattttaga gggtcaagat attactttgc cagaattagg
     7501 tagagaatta gaaaatatta caggacatac gattgctgat tctactggcg aaattaagcg
     7561 tgtaattgca catttaccaa actttgagtc cgatacagat acttttgttg ctacatatcg
     7621 tttaaaccat caacaagatt ttatagatgc aacttttact gcgctgaaat cagatagagc
     7681 acgtttaaaa gaagtgccag ttcatgttga acttataagt tatatttcta aatcaaaata
     7741 aactgctatc taaaacgcaa agttgatcaa aatatcgatt ttgtgttttt tattgagaaa
     7801 ttatatagga gtgtcaatcg atgatttatt gtgaaacaga gcgtttaata ttaagagact
     7861 ggcatgaaga tgatctgtta ccttttcaaa aaatgaatgc gaattatgac gtacgtaaat
     7921 attttccaag tttattgagt tatcgtcgtt cagaattaga tatgagaact atggatgcgg
     7981 ttattaaaga ttatggcatt ggattatttg ctgtagaaga taaagagtcc catcaatgga
     8041 taggctttat aggtttgaat tatattccag aaacaagcga ttatccattt aaagaattac
     8101 cgctttatga aataggttgg cgcttgttgc cagaattttg gggaaaagga ttagcaactg
     8161 aaggcgcaaa ggcaacattg aagttagcag aagaacatca aatatacgat gtctatagtt
     8221 ttacagcaga agcaaataaa gcttcacaac gtgtaatgga aaaaattggc atgacagtgt
     8281 atgatcattt cgaattaccc aatctaagta agtatcattt attaaaaagg caagtgcgct
     8341 attacattaa tcttcgaaag tgaaaaattt atacataagc gtaacaaaca cccctaacat
     8401 tgtttagctg atgataacaa tattaggggt gtttgtttat tttttaacct tagaatgatt
     8461 aatcgtatga acgagtaccc agaggtttga aatttaatat tgattcaatt aatgattcct
     8521 tagtgtcgca taacggtgca agagcacgat acttaggatc aataaaacct tcctcaatca
     8581 tatggtcaat cattgtttgt agtggattga aaaagccatt aatattataa atggcaatag
     8641 gcttttcatg gatacctatt tgagcccaac tatacatttc gaaaaattct tctagtgaac
     8701 ctgcgccacc aggagccatg acaaatgcat ctgcaagttc tgccatttta tttttacgtt
     8761 catgcataga atcaactaaa attaattcag ttaaacgttg gcttgtgatt tcatgttcat
     8821 ctaacatttt aggcatgacg ccaatagctt tgccgccatg atctaataca ccatcttgaa
     8881 tggcacccat aatgccaatt gaccctgcac caaatactaa ttcataacct tgttcagcaa
     8941 aatatttacc taaatcgtat gctttttgta catatgaagg gtcatgacct ttgcttgcac
     9001 cacaataaac tgcgattcgt ttcatgttaa tccagctcct taattcgatg aatgactttt
     9061 aatagtgatt gttcaaacac tttttgatct tgctttgtaa aaggtggggg acctttgtgg
     9121 cgaccacctt gttttctaat ttgtgcattc atatatcgtt tatctaatag ttgttgaata
     9181 tttttggaat tgtatatctt cccattatga tgcatgacaa ttaagacttt gtcgactaat
     9241 aaacttgcga gtccataatc ttgagtgact acgatatcat ccttcgttga taattgaaca
     9301 attttgtaat caactgcatc tggtccatca tcaacatata atgttgatac atgtggagga
     9361 tataattggt tcgaaaaatg gctgaagctc cgaataattg tcacaaaaat gcctgtctca
     9421 gttgttaaat ctataataga atcaacaaca ggacaagcat ctccatcaat aataatatgt
     9481 gtcacaatta tgcctctgta ttgttttctt tattttgttg agaggcgctt ttggcaacat
     9541 aatctttata ttttttaaat gacttgatgc gtgctttatc agcttcttgt tggcgttttt
     9601 gttcttcttt gtgtcgtttt tcaatatttt tttgtaactt tttattcatt ttagcgattt
     9661 ctttgcgatt tttttcagct agtttatcgc cttttttctc agttttctca tctaatttat
     9721 taggtgttaa gcctgctttt tcttcgtatt tttgtgattt tttcatatct ttaatacgtt
     9781 gtatttcatt cttttcgcgg gctttttgct cttctttatg acgcttttcg atattttttt
     9841 gaagtatttt attcatttta tcagcgtctt tacgattttg tttagctaat ttttcgcctt
     9901 ttttctcaat ataggcagga tcatgttctc tagcaaactt tttaagttca cgtttatttt
     9961 caaaatcttg ttttttatcg ccgacatatt ctttaacatc actcgctgtg ttactgattg
    10021 ctgcagatgt ttttgaagca actttacttg tagcatctgt aactttttgt acgtccggat
    10081 gttgtttgat acgtttacgt tcaacaatta acggtaccaa tacaattggt aatacattaa
    10141 tcataaattt gatgactttt ttcttatcca tagatcttgc ctccataatt actttattaa
    10201 ttttacatac cctatgatac atcaatataa acgatgatag tagtgaatca ctattaagta
    10261 tttcagatgt tttttaaaag aagacaataa aaactgccaa tcaagtgatt ccttaattga
    10321 cagtctatat tttaaaagga aattaaatac ctttaccaat gccaaatccg aagtaaagta
    10381 tagcaataaa gattactaat acaattctgt aaatggcaaa tggaattagt ttgattttgt
    10441 taattagatg caagaatgtt ttgattgcaa ttagtccaac agtaaatgca gctaaaaagc
    10501 ctaaaatata aaaaggtata tcagcaatct gaatatcttg ataatgtttt aataaagata
    10561 aaccactagc tgctaacata attggaacag ccataataaa tgtaaagtcc gatgctgctt
    10621 tatgatttaa tttcattaat accccagttg aaattgttga gcctgaacgg ctgaaaccag
    10681 gccacatagc tactgcttga gaaataccaa ttacaaatgc ttggaaataa ctgatttgat
    10741 ctactgtttg tgggttttta actttagctg agtatttatc agcaataatc atatagatag
    10801 cacctacgaa taagccaatc ataacagttg gcacactaaa taaatgttct tcgatgaaat
    10861 catcaaatag taagcctaaa atacctgctg gcaccatacc cactaataca tgtaataaat
    10921 ttaaacgtct tggctttgaa cgtctttgtt gatcgttatc tccttcaaca tgtttgtgtt
    10981 taccaatatg taaaatctct aagaagcgtt cgcggaacac ccatgctgct gcaaagacgg
    11041 atcctaattg gatgacgatt ttaaatgtaa atgctgactg agaacctaaa aattcagatg
    11101 attttaacca catatcatca actaggatca tatgtccagt agaggaaaca ggtgcaaatt
    11161 ctgttaatcc ttcgacgacc cctaagataa taccttttat taattcaatg ataaacataa
    11221 tgtacccact ttcattactc aatttaattt atttaaatat caaaattacc atatcatgat
    11281 agcatattca tttaaagaca tgctagttat agttataata ctagactaaa gatgtatata
    11341 ttcattttct tttacatata aaactacaat attttattga gctatttaat ttgattttaa
    11401 ggaaaacctt ttataatagg tttaggtgat ataattgtga aaaaattaac aacaatactg
    11461 tttcaatata aaatttttcc ggtactcatg ttcttggtca gtactggtct cggcataatc
    11521 gttataacgc aaaatatttt aatagcagat tttttagcta aaattataag acatcaattt
    11581 caaggtttat ggattgtatt atttatttta ttaggtgttt tacttttaag agcaactgtg
    11641 caatttctaa atcaatggtt aggtgataca ttagcattta aagttaagca tatgcttaga
    11701 cagcgggtta tttataaaaa taatggtcat ccaatcggtg aacaaatgac tatactcaca
    11761 gaaaacattg atggtctagc acctttttat aagagttatt tgcctcaagt gttcaaatca
    11821 atgatggttc cgctcatcat aatcattgca atgtttttca tccatttcaa taccgcatta
    11881 attatgttaa taactgcacc atttattcct ttgttttata ttattttcgg tttgaaaacg
    11941 cgagatgagt caaaagatca aatgacttat ttgaatcaat ttagtcaacg gtttttaaat
    12001 attgctaaag gtttagtgac gttaaagcta tttaatcgta cagagcaaac agagaagcat
    12061 atttacgacg atagtactca gtttagaact ttaacaatgc gcattttacg cagtgctttt
    12121 ttatcgggat taatgctcga atttataagt atgttaggta ttggattggt tgcattggaa
    12181 gcaacgctaa gcttagtagt atttcataat attgatttta aaactgcggc aattgcgatt
    12241 attttagcgc ctgaatttta taatgcaatt aaggacttag ggcaagcgtt ccatactgga
    12301 aaacaaagtg aaggtgccag tgacgttgtg tttgagtttt tagaacaacc gaactataat
    12361 aatgaatttc tattaaagta tgaggaaaac caaaagccat ttattcagtt aacagacata
    12421 tcatttcgat atgatgattc tgatagattg gtattaaatg atttaaattt ggaaatattt
    12481 aaaggtgatc aaattgcact tgtaggtcca agcggggcag gtaaatccac tttgacacat
    12541 cttattgcag gtgtttatca gccaacaata ggtactataa gtacaaacca gcgtgattta
    12601 aatataggaa tacttagtca acagccatat attttcagtg cttctataaa agagaatatt
    12661 acgatgttta aagatataga aaataatact attgaagaag tgctagacga agtaggttta
    12721 ttagacaaag tgcaatcttt cacaaaaggc attaacacaa taataggtga aggaggcgaa
    12781 atgttatctg gtggacagat gagacgcata gaactttgcc gtcttttagt tatgaagcca
    12841 gatctcgtta tatttgatga gcctgcaact ggtttagata ttcaaacaga acacatgatt
    12901 cagaacgttc tgtttcaaca ttttaaagat acaacgatga ttgtcattgc acatagagat
    12961 aatacaattc gccatttaca acgacgcttg tatatagaaa atggaagact gattgctgat
    13021 gatcgcaata tttcagtaaa tataacagaa aatggtgatg acttatgaaa acacgactaa
    13081 aatttcaagt agataaggat ttattgttag ctatagttgt tggtgtttgt ggaagtttag
    13141 ttgcgctcgc catgtttttc ttaagtggtt atatggtgac acaaagtgca cttggtgcgc
    13201 cactatacgc tctgatgatt ttagtcgtta cagtaaaatt gtttgggttt ttaagagcta
    13261 ttactcgata cgtagagcgc cttatttctc ataaagctac atttacaatg ctacgtgata
    13321 ttcgggtaca gtttttcggt aaattagtaa atgtcattcc taatgtttac cgtaaactga
    13381 gttctagtga tttaatttca cgtatgatta gtcgtgttga ggcattacaa aatatatatt
    13441 tacgtgttta ttatccacca gtcgtcatcg gtttgacagc gctagttaca gtcatagttt
    13501 tggcgttcat ttcaatcggc catgcgctat tgattatggt tagcatgttg ttcactttac
    13561 tcattgttcc ttggttaagc tcaaaaaaag cacgtacttt aaagaaacat gcagctaatg
    13621 aacaggcccg atttttaaat catttttatg attataaagc tggtatggat gaactacgtc
    13681 gatttaatca aattaatcat tatcgagata atttgatggc taaattaaat cattttgata
    13741 aattacaact taaagagcaa cgctttttaa cgatttatga ttttatatta aatattattg
    13801 ctatgctttc gatttttggt agtttagttc taggattaat tcaaattaat gcaggccaac
    13861 taaatattat ttatatgacg agtatagttt taatggtctt aactttattt gaacaagctg
    13921 taccaatgac aaatgtcgcg tattataaag cggatactga ccaagcattg cacgatatta
    13981 atgaagtgat atctgtacct tctactaatg gaaaaaaacg tcttaatgat aagtatgatg
    14041 caacgaacat ttatgaagtt aaggatgcta gttttaagta ttggaatcag caaacgtatg
    14101 tgttgtcgga tattaatttt aatgttaata gaggcgaaaa gattgcgatt gtgggtcctt
    14161 ctggttcagg aaaaagtaca ttactacaaa ttatggcagg gttatatcaa ttagatagtg
    14221 gctctgttcg tttcgaaaat atggatatgt ttgaaataga tgacaaagat aagtttgaat
    14281 cgttaaatgt cttgctacaa tctcaacaat tatttgatgg tacaatacgt caaaatttat
    14341 ttaccgatga aaaagatgaa gcggtgcaag caatatttaa gcaattagat ttagaacatt
    14401 tggcactaga acgtcaaatt gacttagatg gtcatacatt atctggcgga gaaattcagc
    14461 gtttagcgat tacgaggatg ttattaaaag atactgcatc aacatggatt ttagatgaac
    14521 caacaactgc attagataaa caaaatagtt taaaagttat ggatttaatt gaagcacatg
    14581 cagaaacatt aattgttgct acacacgatt taactttatt gtcacgtttt gagaccatca
    14641 ttgtgatgat aaatggtaaa atagttgaaa agggaaacta tcaacaatta ctagctaatc
    14701 aaggtgcttt atggaatatg attcaatata atgcataaaa aaactgcttg ataggctaag
    14761 aaacctttca agcagttttt taactaacaa gcttacgcgt gctaattgtt tttctattct
    14821 taataaattc taaacattac tttaattgtc atgacaaaag ttaattattt ttcctttgtt
    14881 tcatcaaatg catgaatgac tttacctaat aagcgattaa gttctttaac ttcatcttgc
    14941 gataaagaag aagctgaagc gactttgtca gatgcattac ttaattctgg tctaatagtt
    15001 tcacttttgt cagtcaagtg aataaatact tcacgttgat cgacttcgga acgttcacgc
    15061 ttaattaagt ctacttgttc cattcgtttt aataatggtg atactgtacc agtatcgagt
    15121 gctaattcag ttacgacttt cttgacgttt acaggagatt catcccataa aattgttaag
    15181 acaagaaatt gtgggtatgt tagattgtac ttcttaaaaa ctttgttaga gtagtagcga
    15241 ttaacttgtc tttgagcatt gtacaaacta aagcatagct gttcttttaa attatgttga
    15301 tcagacatta aagttctcct ccagacatac tatccgtttt tttctctttt cggattggta
    15361 atcattaaaa agttgattgt ttattaattc acaactttct ttgattcaat gccatgctaa
    15421 aattaaagta tgtttaaagt ttagaagata tttttgatta aatcaagcaa
//
LOCUS       DALPQQ010000060        14833 bp    DNA     linear   BCT 22-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus strain K18-6-464
            SAMD00233528-rid16434743.denovo.060, whole genome shotgun sequence.
ACCESSION   DALPQQ010000060 DALPQQ010000000
VERSION     DALPQQ010000060.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMD00233528
            Sequence Read Archive: DRR236061
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 14833)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 14833)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001543423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001543423.1
            Genome Coverage       :: 77x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/22/2022 17:09:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,811
            CDSs (total)                      :: 2,743
            Genes (coding)                    :: 2,689
            CDSs (with protein)               :: 2,689
            Genes (RNA)                       :: 68
            rRNAs                             :: 2, 4, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 4, 2 (16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 54
            CDSs (without protein)            :: 54
            Pseudo Genes (ambiguous residues) :: 0 of 54
            Pseudo Genes (frameshifted)       :: 27 of 54
            Pseudo Genes (incomplete)         :: 27 of 54
            Pseudo Genes (internal stop)      :: 10 of 54
            Pseudo Genes (multiple problems)  :: 10 of 54
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..14833
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMD00233528-rid16434743.denovo.060"
                     /strain="K18-6-464"
                     /db_xref="taxon:1280"
                     /geo_loc_name="Japan: Niigata"
     gene            <1..677
                     /locus_tag="O7798_001518"
     CDS             <1..677
                     /locus_tag="O7798_001518"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498657.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="tandem-type lipoprotein"
                     /protein_id="HDC2863780.1"
                     /translation="VKKSFEKTLSMYPIKNLEDLYDKEGYRDDQFDKNDKGTWIINSE
                     MVIQPNNEDMVAKGMVLYMNRNTKTTNGYYYVDVTKDEDEGKPHDNEKRYPVKMVDNK
                     IIPTKEIKDEKIKKEIENFKFFVQYGDFKNLKNYKDGDISYNPEVPSYSAKYQLTNDD
                     YNVKQLRKRYDIPTSKAPKLLLKGSGNLKGSSVGYKDIEFTFVEKKEENIYFSDSLDY
                     KKSGDV"
     gene            729..1499
                     /locus_tag="O7798_001519"
     CDS             729..1499
                     /locus_tag="O7798_001519"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498658.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tandem-type lipoprotein"
                     /protein_id="HDC2863781.1"
                     /translation="MIKRVNKLVLGISLLFLVISITAGCGMGKEAEIKKSFEKTLSMY
                     PIKNLEDLYDKEGYRDDQFDKNDKGTWIVNSQMAIQNKGEALKIKGMLLKIDRNTRSA
                     KGFYYTNEIKTEKYEVAQDNQKKYPVKMINNKFISTEEVKEENIKKEIENFKFFAQYS
                     NFKDLMNYKDGDISYNPEVPSYSAQYQLTNDDYNVKQLRKRYDIPTNKAPKLLLKGTG
                     NLKGSSVGYKKIEFTFLENKNENIYFTDSLHLEPSEDK"
     gene            1563..2333
                     /locus_tag="O7798_001520"
     CDS             1563..2333
                     /locus_tag="O7798_001520"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498659.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tandem-type lipoprotein"
                     /protein_id="HDC2863782.1"
                     /translation="MMKRLNKLVLGIIFLFLVISITAGCGIGKEAKIKKSFEKTLSMY
                     PIKNLEDLYDKEGYRDDEFDKNDKGTWIIGSEMATQNKGEALKVKGMVLYMNRNTKTT
                     KGYYYVNAIKNDKDGRPQENEKRYPVKMVDNKIIPTKEIKDKNIKKEIENFKFFVQYG
                     NFKDLSKYKDGDISYNPEVPSYSAKYQLTNDDYNVKQLRKRYDIPTNKAPKLLLKGTG
                     NLKGSSVGYKDIEFTFVEKKEENIYFSDGLIFKPSEDK"
     gene            2400..3167
                     /locus_tag="O7798_001521"
     CDS             2400..3167
                     /locus_tag="O7798_001521"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498660.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tandem-type lipoprotein"
                     /protein_id="HDC2863783.1"
                     /translation="MKRLNKLVLYISFLILVISFTAGCGIGKEAEVKKSFEKTLSMYP
                     IKNLEDLYDKEGYRDDEFDKNDKGTWIIGSEMVVQPKGERMKSKGMVLYMNRNTKTTT
                     GKYIVSETLHDEDGRPKSKDKEYPVKMVDNKIIPTKGIKDENIKKEIENFKFFAQYGS
                     FKDLSKYKDGDISYNPEVPSYSAKYQLTNDDYNVKQLRKRYKIPTNKAPKLLLKGSGD
                     LKGSSVGYKDIEFTFVEKKGENTFFTDSLHLEPSEDK"
     gene            3261..5498
                     /locus_tag="O7798_001522"
     CDS             3261..5498
                     /locus_tag="O7798_001522"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020808042.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HDC2863784.1"
                     /translation="MQRDYLIRVETESMSDFKRLNSLMIGFVIKGEAHIYDENNMTQC
                     NSGDIFIINHRDLYRFQLQQDGIICYIQFQMKYLADKFDDVHCLYFHLTDATTTKNIH
                     QLRNIMARLVSTHIRHNELSKLTEQQLVIQLLMHMIHYVPRTYHSNQSILNDDKVNQV
                     CDYIELHFHEDLSLSELSEYVGWSESHLSKKFTESLGVGFHHFLNTTRIEHAKLDLTY
                     TDETITDIALQNGFSSAASFARTFKHFTHQTPKQYRGDRPAITENQQSAQHDYHDREL
                     ILLLNDYIEEMNHFIEDIEKMNYKEIAFQPTNHQLNQFNHIIQVGYLRNLLNTQYQSQ
                     LLTCHHDFQVNEVLAYDVIPYIMKKLNAPFTYDAEISNIFYDIDLCLDFLLDHNFSLT
                     MHLDQYDSRDYIDAFKIFIHHVALHVSHRKDLKFNLYVTTLHTSLIEMIDYFKALFPN
                     GGLYIHLDQATERHLPLLKRLEPHIDHFVFDANSNDAVDFNKMNDDEFKTASQMIINK
                     TNYLIDLMHRHRLKRPLILLNWNTLTGDTFITNGEYFRGGIIIEQLLKLSSKVEGIGY
                     WLNYDLHVSHCKNERDYMNSIELFHQYNGKRPVYFTALLFNKLTSNILYSDDTCIVTG
                     TDSNFQILLYDAKHFNPYLALDNQMNMRATEMIHLNINALEEGMYKIKHFTLDKENGA
                     LFNLWRKHHTIHGMDKDSIDYVNRMSFPKLEVYDIDITDTLALNIKMITNGIHLIEVK
                     RYPSS"
     gene            5649..6827
                     /locus_tag="O7798_001523"
     CDS             5649..6827
                     /locus_tag="O7798_001523"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498662.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase"
                     /protein_id="HDC2863785.1"
                     /translation="MNQQLIETLKSKEGKMIEIRRYLHQHPELSFHEDETAKYIAEFY
                     KGKDVEVETNVGPRGIKVTIDSGKPGKTLAIRADFDALPITEDTGLSFASQNKGVMHA
                     CGHDAHTAYMLVLAETLAEMKDSFTGKVVVIHQPAEEVPPGGAKTMIENGVLDGVDHV
                     LGVHVMSTMKTGKVYYRPGYVQTGRAFFKLKVQGKGGHGSSPHMANDAIVAGSYFVTA
                     LQTVVSRRLSPFETGVVTIGSFDGKGQFNVIKDVVEIEGDVRGLTDATKATIEKEIKR
                     LSKGLEDMYGVTCTLEYNDDYPALYNDPEFTEYVAKTLKEANLDFGVEMCEPQPPSED
                     FAYYAKERPSAFIYTGAAVENGEIYPHHHPKFNISEKSLLISAEAVGTVVLDYLKGDN
                     "
     gene            6829..8217
                     /locus_tag="O7798_001524"
     CDS             6829..8217
                     /locus_tag="O7798_001524"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498663.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HDC2863786.1"
                     /translation="MNETYRGGNKLILGIVLGVITFWLFAQSLVNVVPNLQQSFGTDM
                     GTISIAVSLTALFSGMFVVGAGGLADKIGRVKMTNIGLLLSIIGSALIIITNLPALLI
                     LGRVIQGVSAACIMPSTLAIMKTYYQGAERQRALSYWSIGSWGGSGICSLFGGAVATT
                     MGWRWIFIFSIIVAVLSMLLIKGTPETKSEITNTHKFDVAGLIVLVVMLLSLNVVITK
                     SAALGYTSLWFFGLIAIVIVAFFIFLNVEKKVDNPLIDFKLFENKPYTGATISNFLLN
                     GVAGTLIVANTFVQQGLGYTALQAGYLSITYLIMVLLMIRVGEKLLQKMGSKRPMLLG
                     TFIVVIGIALISLVFLPGIFYVISCVVGYLCFGLGLGIYATPSTDTAISNAPLDKVGV
                     ASGIYKMASSLGGAFGVAISGAVYAGAVAATSIHTGAMIALWVNVLMGIMAFIAILFA
                     IPNDDKRVKDAK"
     gene            complement(8703..10364)
                     /locus_tag="O7798_001525"
     CDS             complement(8703..10364)
                     /locus_tag="O7798_001525"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498664.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Na/Pi cotransporter family protein"
                     /protein_id="HDC2863787.1"
                     /translation="MSVTEVIFSFLGGLGIFLYGLKIMGDGLQASAGDRLRDILNKFT
                     SNPVLGVIAGIVVTILIQSSSGTTVITIGLVTAGFMTLKQAIGVIMGANIGTTVTAFI
                     IGIDLGEYAMPILALGAFLIFFFKRSKINNIGRILFGFGSLFFGLEFMGDAVKPLASL
                     DGFKQLMLDMSTNPILAVIVGAGLTALVQSSSATIGILQEFYQQDLISLNAAIPVLLG
                     DNIGTTITAILASLAGSIAAKRAALVHVIFNLIGVIIFTIFLPVVIHLISLLQDLWHL
                     KPAMTIAVSHGIFNITNTLIQLPFVAGLAWIVTKLVPGKDIADDYKPQHLNKDLVYHA
                     PGVALQETQKELQNVGQIVLSMFEDIREITKDDKKLIKKLEQKHQAVETINDSIRNYL
                     VRISTKAITKADVERLAVMFDVNRSILKVAELTEEYVAQLKRQHDEDIRITEDAQRGM
                     DKLFNHVAESFDKAIDMLDVYDKTKKDEIVERSRESFNIEHKLRKGHIKRLNRGECTT
                     KGGLLYIDMIGVLERIGYHSRNVSEALVGLNDDVPTDEEIATTEI"
     gene            complement(10690..12465)
                     /locus_tag="O7798_001526"
     CDS             complement(10690..12465)
                     /locus_tag="O7798_001526"
                     /EC_number="4.2.1.53"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498665.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="oleate hydratase"
                     /protein_id="HDC2863788.1"
                     /translation="MYYSYGNYEAFARPKKPENVENKSAYLIGSGLASLAAACFLIRD
                     GQMEGSKIHILEELPKAGGSLDGENMPLKGYVVRGGREMENHFECLWDLFRSIPSLEI
                     DNASVLDEFYWLNKEDPNYSRCRVIEKQGQRLVTDGDFTLTKTAIKEILDLCLTNEED
                     LDDVKITDVFSDDFFNSNFWIYWKTMFAFEPWHSAMEMRRYLMRFVHHISGLADFSAL
                     KFTKYNQYESLVLPMVEYLKSHGVQFEYDVKVEDIKIDVTTSQKIAREILIDRNGNAE
                     SIKLTINDLVFVTNGSITESSTYGDNDTPAPPTDELGGSWTLWKNLARQSPEFGNPDK
                     FCQNIPKKSWFVSATSTTNNKEIIDTIESICKRDPLAGKTVTGGIITINDSAWQMSFT
                     INRQQQFKDQPENEISTWIYALYSDVNGDYIKKPITECSGNEICQEWLYHLGVSTDKI
                     EDLAKHASNTIPVYMPYITSYFMTRAIGDRPLVVPHQSQNLAFIGNFAETERDTVFTT
                     EYSVRTAMEAVYQLLNIDRGIPEVINSPFDLRVLMDAIYELNDHQDLREITKDSKMQK
                     LALAGFLKKIKGTYIESLLKEHKLL"
     gene            complement(12639..13511)
                     /locus_tag="O7798_001527"
     CDS             complement(12639..13511)
                     /locus_tag="O7798_001527"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498666.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DMT family transporter"
                     /protein_id="HDC2863789.1"
                     /translation="MNKLRDTTFLSYLFTIILWGSAFPMIKIALNDFSAESLSAFRLI
                     LATIILLPFVIIKKLPTPELRDIPVIFILGFCGFVIYHTALNFGETLISAGISGILVS
                     TTPIFSSALAYIFLKEHFSKWNWLSSLVAFIGISIISISKDDYTTINVLGVFIILLAS
                     FSESLYFTFQKKYIEKYGFIAFTLYTIMASSPFMLIFIPEIINDIHGATFTSIVSVLY
                     LAIFPTIIPYVLLAYIVKSVGVSDATMSLYLTPIVSLLLSYLLLDELPTTLAIIGGII
                     TLLGVSLSNFFQNT"
     gene            13624..>14833
                     /locus_tag="O7798_001528"
     CDS             13624..>14833
                     /locus_tag="O7798_001528"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498667.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PLP-dependent aminotransferase family protein"
                     /protein_id="HDC2863790.1"
                     /translation="MAKYKDIASDIRDKIITGDWFYGMKIPSHRQLAIQYNVNRVTII
                     KSIELLEAEGFIYTKVGSGTYVNDYLNEAHITNKWSEMMLWSSQQRSQYTVQLINKIE
                     TDDSYIHISKGELGISLMPHIQLKKAMSNTASHIEDLSFGYNNGYGYIKLRDIIVERM
                     SKQGINVGRENVMITSGALHAIQLLSIGFLGQDAIIISNTPSYIHSTNVFEQLNFRHI
                     DVPYNQINEIDTIIDRFINFKNKAIYIEPRFNNPTGRSLTNEQKKNIITYSERHNIPI
                     IEDDIFRDIFFSDPTPSIKTYDKLGKVIHISSFSKTIAPAIRIGWIVASEKIIEQLAD
                     VRMQIDYGSSILSQMVVYEMLKNKSYDKHLVKLRYVLKDKRDFMLNILNNLFKDIAHW
                     EVPSGGYFVWL"
BASE COUNT         5271 a         2191 c         2685 g         4686 t
ORIGIN      
        1 aagttaagaa aagctttgaa aaaacattga gtatgtaccc tattaaaaat ctagaggatt
       61 tatacgataa ggaaggctat cgtgatgatc agtttgataa aaatgataaa ggtacatgga
      121 ttataaattc tgaaatggtt attcaaccta ataatgaaga tatggtagct aaaggcatgg
      181 ttctatatat gaatagaaat accaaaacaa caaatggtta ctactatgtc gatgtgacta
      241 aggacgagga tgaaggaaaa ccgcacgaca atgaaaaaag atatccggtt aaaatggtcg
      301 ataataaaat cattccaaca aaagaaatta aagatgaaaa aataaaaaaa gaaatcgaaa
      361 actttaagtt ctttgttcaa tatggcgact ttaaaaattt gaaaaattat aaagacggag
      421 atatttcata taatccagag gtgccgagtt attcggctaa atatcaatta actaatgatg
      481 attataatgt aaaacaatta cgcaaaagat atgatatacc gacgagtaaa gctccaaagt
      541 tattgttaaa aggttcaggg aatttaaaag gctcatcagt tggatataaa gatattgaat
      601 ttacgtttgt agagaaaaaa gaagaaaata tatactttag tgatagctta gattataaaa
      661 aaagcggaga tgtataatca tggctcaatc agaatatgaa atcaatcccg gaaaaagaga
      721 gtgatgaaat gataaaacgt gtaaataaat tagtgcttgg tattagtctt ctgtttttag
      781 tcattagtat cactgctggt tgtggcatgg gtaaagaagc ggaaataaag aaaagttttg
      841 aaaaaacatt gagtatgtat ccgattaaaa atctagagga tttatacgat aaagaaggat
      901 atcgtgatga tcaatttgat aaaaatgata agggaacatg gattgtaaat tctcaaatgg
      961 caattcaaaa taaaggagaa gctctaaaaa taaaaggcat gcttttgaag atagatagaa
     1021 atacaagaag tgcaaaagga ttttactata ctaatgaaat aaagacggag aaatacgaag
     1081 tagctcagga taatcaaaaa aaatatccag ttaaaatgat taataataaa ttcatttcta
     1141 ctgaggaagt taaagaagaa aacataaaaa aagaaatcga aaactttaag ttttttgcgc
     1201 aatatagcaa ttttaaagat ttaatgaatt ataaagatgg agatatatca tataatccag
     1261 aggtgccgag ttattcagct caatatcaat taactaatga tgattataat gtaaaacaat
     1321 tacgtaaaag atatgacata ccaacaaata aagcgccgaa gctgttgttg aaaggtacag
     1381 ggaatttaaa aggttcatca gttggatata aaaaaattga atttactttt ttagagaata
     1441 aaaatgaaaa tatttacttt actgatagtc tacatcttga accgagcgag gataaataat
     1501 catcttttaa ccagaatatg aaatcaatct aggacaacct aataaaagga gagagttgta
     1561 agatgatgaa acgattaaac aaattagtgt taggcattat ttttctgttt ttagtcatta
     1621 gtatcactgc tggttgtggc ataggtaaag aagcgaaaat aaagaaaagt tttgagaaga
     1681 cattgagtat gtatccgatt aaaaatctag aggatttata cgataaagaa ggttatcgtg
     1741 atgacgaatt tgataaaaat gataaaggta catggattat tggttctgaa atggcaactc
     1801 aaaataaggg ggaagctctg aaagttaaag gtatggtctt gtatatgaat agaaatacca
     1861 aaacaacaaa aggatattat tatgtaaatg caataaagaa tgataaagac ggaagacccc
     1921 aagagaatga aaaaaggtac ccagttaaaa tggtcgataa taaaatcatt ccaacaaaag
     1981 aaattaaaga taaaaacata aaaaaagaaa tcgaaaactt taagttcttt gttcaatatg
     2041 gaaactttaa agatttgtcg aagtataaag acggagatat ttcatataat ccagaggtgc
     2101 cgagttattc ggctaaatat caattaacta atgatgatta caatgtaaag caattacgta
     2161 aaagatatga cataccaaca aataaagcac cgaagttgtt gttgaagggt acagggaatt
     2221 taaaaggttc atcagttgga tataaagaca ttgaatttac gtttgtagag aaaaaagaag
     2281 agaacattta ctttagtgat gggttaattt ttaaaccaag tgaggataaa taatcatgac
     2341 tcgatcaaaa tatgaaatca atccaggaaa gataataaga agaataggat tgtgaaatta
     2401 tgaaacgatt aaacaaattg gtattgtata ttagtttttt gatattagtc attagtttca
     2461 ctgctggttg tggcataggt aaagaagcgg aagttaagaa aagctttgaa aaaacattga
     2521 gtatgtatcc gattaaaaat ctagaggatt tatacgataa agaaggttat cgtgatgacg
     2581 aatttgataa aaatgataaa ggtacatgga ttattggttc tgaaatggtt gttcaaccta
     2641 aaggggaacg tatgaaatca aaaggtatgg ttctatatat gaatagaaac actaagacta
     2701 caaccgggaa gtatatagtg agtgaaacac ttcatgatga agatggtaga cctaagagta
     2761 aagataaaga atatcccgtt aaaatggtag acaataaaat cattccaact aaaggtatca
     2821 aagacgaaaa tataaaaaaa gaaatcgaga attttaagtt cttcgcgcaa tatggcagct
     2881 ttaaagattt gtcgaagtac aaagacggcg atatatcata taatccagag gtaccgagtt
     2941 attcagcaaa atatcaatta actaatgatg actataatgt aaaacaatta cgaaaaagat
     3001 ataaaatacc aacgaataaa gcaccaaagt tattgttgaa aggttcggga gacttaaaag
     3061 gttcatcagt tggatataaa gacattgaat ttacttttgt ggagaaaaaa ggtgaaaata
     3121 ctttttttac tgatagtcta catcttgaac cgagtgagga taaataatca tccacacaca
     3181 cgattcaata tgaaattcaa atatgttgct gtaaaataat gtaaaataaa cgtattcata
     3241 ttactgaatt gagggatagt atgcaacgtg attatttaat tcgagtagaa actgagagta
     3301 tgtcagattt caaaaggctc aatagtttaa tgattggttt tgttattaaa ggtgaggcac
     3361 acatttatga tgaaaataat atgacgcaat gcaacagtgg cgacattttc atcattaacc
     3421 accgcgactt gtatcgattt caacttcaac aagatggcat catatgttat atccaattcc
     3481 aaatgaaata tttagcagac aagtttgatg atgtgcattg tctatatttt cacttaacag
     3541 atgcgaccac aacaaagaat atacatcaac tgagaaatat aatggcaaga ctggtttcaa
     3601 cacatatccg acataatgag ttgtctaaat tgactgagca acaacttgtg attcagttgc
     3661 ttatgcatat gattcattat gtcccgcgta catatcattc gaaccaaagt atcttaaatg
     3721 atgataaagt gaatcaagta tgcgactata tcgagttaca ttttcatgaa gatttaagcc
     3781 tttcagaatt aagcgaatac gttgggtggt cagagagcca tctgtctaaa aagtttacag
     3841 aatcgctagg tgtaggattc catcatttct taaatacgac gcgaattgag catgcgaaac
     3901 tcgatttgac atacacagat gaaaccatta ctgatattgc attgcaaaat ggcttttcaa
     3961 gtgcagcgag ctttgcgaga acatttaaac actttacgca tcaaacacct aaacaatatc
     4021 gaggtgatcg tccagcaatc actgaaaacc agcaatcggc acaacatgat tatcacgacc
     4081 gtgaattgat attactttta aatgactaca ttgaagaaat gaatcatttt attgaagata
     4141 ttgaaaagat gaactataaa gagattgcct ttcaaccaac caatcaccaa ctaaatcaat
     4201 ttaatcatat tattcaagtg ggctatttga ggaatttgct caatacacag tatcaatcac
     4261 agttgcttac atgtcatcat gattttcaag tcaatgaagt attagcatat gatgtgattc
     4321 catatatcat gaaaaagctc aatgcgccat tcacgtatga tgcagaaatt tcgaatatat
     4381 tttatgatat tgatttgtgt ttagactttt tattagatca taactttagt ttgaccatgc
     4441 atttggatca gtatgactca cgtgattata tcgatgcatt taaaattttt atccatcacg
     4501 ttgccctgca tgtcagtcat agaaaagatt tgaagttcaa cttgtatgtg acgacattgc
     4561 acacgtcttt gattgaaatg attgattatt ttaaagcatt attccctaat ggtggcttgt
     4621 acattcactt agatcaagct acggaaagac atctaccatt attgaaacga cttgagccac
     4681 acatcgacca ttttgtattt gatgccaatt caaatgacgc tgttgatttt aataaaatga
     4741 atgatgatga atttaaaacc gcgagtcaaa tgattattaa taaaacgaat taccttatcg
     4801 acttaatgca tcgtcatcgc ctaaagcgtc cactcatttt actcaattgg aatacattga
     4861 cgggtgatac atttattaca aacggcgaat attttagagg tggtatcatc attgagcaat
     4921 tattaaaatt aagttctaaa gtagagggta tcgggtattg gttgaattat gatttgcacg
     4981 tcagtcattg taaaaatgaa cgggattata tgaattctat tgaactattt catcaatata
     5041 atggaaaacg tccggtctat ttcacggcat tgctatttaa taaattaaca agcaatattt
     5101 tgtattctga tgatacatgt attgtcacgg ggactgattc aaattttcaa atattgttat
     5161 atgatgcaaa gcattttaat ccgtacttag cgttggacaa tcaaatgaat atgcgtgcga
     5221 cggaaatgat tcatttgaac attaatgccc tggaagaagg tatgtataag attaaacatt
     5281 ttaccttaga taaagaaaat ggtgcgttat ttaatctttg gcgcaaacat catacgatac
     5341 atggcatgga caaggactct atagattacg ttaatcgaat gagttttccg aaattagaag
     5401 tatatgatat agatatcacg gacacactgg cattaaacat taaaatgatt acgaatggga
     5461 ttcacttaat tgaagtaaaa cgttacccaa gttcataaaa tgatcacaaa tcacaaattt
     5521 tgatatacat aatttgtgat tttttatatt caaagctaaa attgcaaaaa attaatggtt
     5581 aacatctctg ttgttggcaa tataaataat gattaatcat ttatgatgta actaaggaga
     5641 tgaaggatat gaatcaacaa ttaattgaaa ctttaaaatc taaagaaggc aaaatgattg
     5701 agatcagacg ttatttacat cagcatccag aattatcttt tcatgaagat gaaacggcga
     5761 aatacatcgc tgaattttac aaaggtaaag atgtggaagt agaaacgaat gtcggaccac
     5821 gtggaattaa agtaacgatt gattcaggga aacctggtaa aacattagca atccgtgcag
     5881 actttgacgc attacccatt actgaagata caggattatc ttttgcatca caaaataaag
     5941 gtgttatgca cgcatgtggt cacgatgcac atacagcata catgcttgta ttagcagaga
     6001 cgcttgctga aatgaaagat agttttacag gaaaagtcgt tgtgatacat caaccagctg
     6061 aagaagtacc accaggtggt gctaaaacaa tgattgaaaa tggtgtatta gacggtgttg
     6121 atcatgtatt aggtgtacac gtcatgagca caatgaaaac aggtaaagtg tattacagac
     6181 ctggttatgt tcaaacagga cgcgcattct tcaaattgaa agttcaaggt aaaggtggtc
     6241 atggttcatc accacatatg gccaatgatg ccattgttgc aggtagctac ttcgtcacag
     6301 cgttacaaac agttgtatct agacgactaa gtccatttga aaccggtgtt gtcacaatcg
     6361 gttcatttga cggtaaaggt caattcaatg tcattaaaga tgttgttgaa attgaaggtg
     6421 atgtacgtgg attaacagat gctacaaaag caacaattga aaaagaaatt aaacgtttat
     6481 caaaaggatt agaggatatg tatggtgtaa cttgcacctt agaatataac gatgattatc
     6541 cagcattata taatgatcca gagtttactg agtacgtggc taagacgttg aaagaagcaa
     6601 accttgattt tggtgttgaa atgtgtgaac cacaaccacc ttcagaagac tttgcatatt
     6661 atgctaaaga acgcccaagt gcctttattt atacaggtgc agcggtggaa aatggtgaaa
     6721 tttacccaca tcatcatcct aaatttaaca tttcagaaaa atcattactt atttctgcag
     6781 aagcagtagg gacagttgtt ttagattacc ttaaaggaga taactaacat gaatgaaacg
     6841 tatcgcgggg gcaacaagtt aatcttaggt attgtattag gtgttattac attttggttg
     6901 tttgcacaat cacttgtaaa tgttgtaccg aatttacaac aaagttttgg tacagacatg
     6961 gggacaatta gtattgcggt cagtctaact gcactatttt caggcatgtt tgttgttgga
     7021 gcaggtggtc tggcagataa aattgggcgc gtgaaaatga cgaatatcgg tttattatta
     7081 agtattattg gttcagcatt aattattatt acgaatttac cggcattatt aattttaggt
     7141 cgtgttatac aaggtgtatc agcagcgtgt attatgcctt ctacattggc cattatgaaa
     7201 acttattatc agggtgctga acgtcagcgt gccttaagtt attggtctat cggttcttgg
     7261 ggtggcagtg gtatctgttc actcttcggt ggtgcagttg cgacaactat gggttggaga
     7321 tggattttca tcttctcaat tatcgttgcc gtactttcaa tgttactcat caaagggacg
     7381 cctgaaacga aatcagaaat taccaataca cataaatttg acgttgcagg gctaattgtt
     7441 ctggtagtta tgttgctaag tttaaacgtt gtcattacta aaagtgcagc acttggttac
     7501 acatcattat ggttctttgg tttgattgca atcgtaattg tagcattctt tattttctta
     7561 aatgttgaga aaaaagtaga taatccactt attgatttta aattatttga aaataaacca
     7621 tatacaggtg caacgatttc gaacttctta ttaaacggtg ttgcaggtac attaattgta
     7681 gcgaatacat tcgtgcaaca aggtttaggt tatacagcat tgcaggcagg atacttatca
     7741 attacttatt taatcatggt gttattgatg attcgagttg gtgaaaaatt attacaaaaa
     7801 atgggttcta agcgaccaat gttattaggt acattcattg tggtcattgg tattgcactt
     7861 atttcattag tattcttacc aggcatattt tatgttatca gttgtgtcgt aggatattta
     7921 tgtttcggac taggcttagg tatttatgca acaccttcta cagatacagc tatttcgaat
     7981 gcaccgttag ataaagttgg cgttgcttca ggtatttata aaatggcttc atcacttggt
     8041 ggcgcattcg gtgtcgcaat tagtggtgct gtatatgctg gtgcagttgc tgcaacgagc
     8101 attcatacag gtgcgatgat tgcactttgg gttaacgtat taatgggaat catggcattt
     8161 atcgcaattt tattcgcgat tcctaatgat gataaacgtg tcaaagatgc gaaataataa
     8221 cgatgacacg ccaagtgttt tgataatgat ataaatgaaa gtaaagcaaa ttaaatgagg
     8281 aaatgtatag agcagtgcat atagataaat ctatgattgg attaacacta atataaatat
     8341 aaatgaaaaa ccatccactt aaatttttga taagttaggt ggatggttat ttattgcgtt
     8401 gttctaaaaa tttggacatt tatatggaaa gaactatata taatgtgaag gttatggcaa
     8461 ttcgcttcaa tgaaggcgac gtgtaaaagt gtatattaaa cgtttcgggg tcagactccg
     8521 agaacagtgt ccgtcatgct taccgcatac taatgaagca ttattatatc agtgtttata
     8581 gccgatttaa gataataaat tttgctaaac aaaaaagcca acccatgaat gttggattgg
     8641 ctttttacat gcatctgaat ctctaatttt aaaaaatatg aatataaata agacagtaaa
     8701 aattaaattt cagttgttgc aatttcttca tctgtaggta catcatcgtt aaggccaaca
     8761 agtgcttcag aaacatttcg tgaatgataa ccgatacgtt caagaacacc aatcatatcg
     8821 atatatagta atccgccttt tgttgtacat tcaccacgat taaggcgttt aatatgacct
     8881 ttgcgtagtt tatgttcaat attaaatgat tctctactac gttctacaat ttcatctttt
     8941 ttcgttttgt cataaacatc taacatgtcg atggctttat caaatgactc agcaacatgg
     9001 ttgaataatt tatccatacc gcgttgtgca tcttctgtaa tgcgaatatc ttcatcatgt
     9061 tggcgtttta attgagcgac atactcttct gttagctctg ctacttttaa aatagagcga
     9121 ttgacatcaa acataactgc taaacgctca acgtctgcct tcgtaatggc ttttgtagaa
     9181 attctaacta aataatttcg aatgctatca ttgattgttt caacagcttg atgcttttgt
     9241 tcaagctttt tgatcaattt tttatcgtct tttgtaattt cgcgaatgtc ttcaaacatt
     9301 gataagacaa tctgacccac attttgtaat tctttttgag tttcttgtaa tgcaacacca
     9361 ggtgcgtgat aaacaagatc tttgtttaag tgctgaggtt tatagtcatc agcaatatct
     9421 ttacctggga caagctttgt aacaatccat gctaaacctg ctacaaatgg taattgaatc
     9481 aaagtatttg ttatgttgaa gataccatgt gatactgcaa tcgtcatcgc tggttttaag
     9541 tgccataaat cttgtaacaa actaatcaaa tgaatcacaa ctggcaagaa aattgtgaag
     9601 ataattaccc cgattaagtt aaagatgacg tgtacaagcg ccgcacgttt tgcagcgatt
     9661 gagccggcta aactagctaa gatagctgta atcgtggtac caatgttatc gcctagtaac
     9721 acagggattg ctgcgtttaa gctaattaaa tcttgttgat aaaattcttg taaaatacca
     9781 atcgtcgcac ttgaactttg aactagtgct gttaaccctg cgccgacaat gacagcgagt
     9841 attggatttg tagacatatc aagcattaat tgcttaaatc catctaatga tgctaaaggt
     9901 ttaacggcat cacccataaa ttctagaccg aagaatagtg aaccgaaacc gaatagtatg
     9961 cggccaatgt tattgatttt agagcgttta aagaaaaaga ttaagaatgc acctaatgct
    10021 aaaattggca ttgcatattc gcctaaatct ataccgataa taaatgcagt taccgttgtt
    10081 ccgatattag cacccattat cactccaatg gcttgtttca atgtcataaa tccagctgtt
    10141 accagtccga ttgtgataac tgtcgtacct gaactacttt gtattaaaat agttacaacg
    10201 atacctgcaa taacacctaa tactggattt gatgtaaatt tgtttaaaat atctcgtagc
    10261 ctgtctcctg ctgatgcttg aagcccgtct cccatgattt ttaagccgta aaggaaaata
    10321 cctaaaccac ctaaaaagga gaaaatgact tctgtaaccg acatttccat tatttcacct
    10381 caaataagct ttatatttag attatcgctt ataattgtaa atttaatgtt aagattaggt
    10441 aaaattattt aacaatatat gttatttgta tatgacttgt aaaatatcgt cacttattat
    10501 gtaaattttc agtgtgaaat ggcaggtttg caatcacttg tttaacaaaa tgatgcaatc
    10561 aatcatgtaa ttatgtttca tcaaaaaaat catgagagtg gaacaacgaa ataattttta
    10621 tgaaaacatc atttctgtcc cagtctcatg atttgaaatc accaaataaa aatctattaa
    10681 tggttttcgt tataacaatt tgtgttcttt taataatgac tcaatgtacg taccttttat
    10741 ctttttaagg aatcctgcta atgcgagttt ttgcattttc gaatctttag taatctcacg
    10801 caaatcttgg tggtcattca gttcgtatat ggcatccatt aagacgcgaa gatcaaatgg
    10861 actattgatg acttctggaa taccacgatc tatatttagt aattgataaa cagcttccat
    10921 ggcagtacga accgaatatt ctgttgtaaa tacagtgtct cgctctgttt ctgcaaagtt
    10981 accaataaat gctaagttct gagattgatg cgggacgact aaaggtctgt cgccgatagc
    11041 acgcgtcatg aaataagatg tgatatatgg catataaaca ggaatcgtat tagatgcatg
    11101 ttttgctaag tcttcaattt tgtcagttga tacacctaag tgatacagcc attcttggca
    11161 tatttcatta ccactacatt ctgtaattgg ctttttaata taatcgccgt ttacatctga
    11221 atataaggca taaatccatg tagatatttc attttcaggt tggtctttaa actgttgctg
    11281 acgattgatt gtaaaactca tttgccatgc agaatcattg attgtaataa taccgcctgt
    11341 aactgttttg cctgcaagtg ggtcacgttt acaaatactt tctattgtat cgataatctc
    11401 tttattgttt gttgtagaag ttgctgaaac aaaccaactt tttttaggaa tattttggca
    11461 aaacttatca ggattaccaa attcaggact ttgtcgcgct aaatttttcc atagtgtcca
    11521 actaccacct aattcgtcag ttggtggcgc tggtgtatca ttatcaccat aagtagagct
    11581 ttctgtaata ctaccgtttg tcacaaagac aagatcgttt atagtcagtt taatagattc
    11641 tgcattacca ttacggtcaa ttaatatttc tcgggcaatt ttttgacttg tcgtaacatc
    11701 tattttaata tcttcgactt ttacatcgta ttcaaattga accccatgcg attttaaata
    11761 ttcaaccata ggtaatacta aagattcata ttgattatat ttagtgaatt ttaaagctga
    11821 aaagtctgcg agaccactaa tatgatgaac gaatcgcatt agatagcgac gcatttccat
    11881 tgcagaatgc cacggttcaa atgcaaacat cgttttccag taaatccaaa agtttgaatt
    11941 aaagaagtca tcggaaaata catctgttat tttgacatca tctaaatctt cttcattcgt
    12001 taagcataaa tctaaaattt ctttaatcgc cgttttagtc aaagtgaagt ctccgtctgt
    12061 gactaaacgt tgaccctgtt tctcaataac acgacagcga gaatagttag ggtcttcttt
    12121 gtttagccaa tagaactcat ctaatacaga cgcgttatcg atttctaatg aagggataga
    12181 tctgaataag tcccacaaac attcaaagtg gttctccatt tcacgaccac cgcggacaac
    12241 atagcctttt aaaggcatat tttcaccatc aagactacca cctgctttag gtaactcttc
    12301 taaaatatga atcttcgaac cttccatttg accatccctt attaaaaaac aagctgcagc
    12361 aagtgaagct agaccagatc cgattaagta agcggatttg ttttctacat tttcaggttt
    12421 tttagggcgc gcaaatgctt cataatttcc ataactgtaa tacatatcca ccaagtcctt
    12481 tcgtattaga atacactcag actatacccc tttgtgaatt gcaaatatta gtatttatat
    12541 tggtaaattt gacgaaatta gatcattttt atatttttga tttttaaaat tttatcactc
    12601 gaatgttttt ggattctgag gtgcgggact tggaataatt atgtattttg aaagaagtta
    12661 cttaaactaa cgcctagtag agtgataatt ccgcctataa tagcaagggt tgttggtagc
    12721 tcgtctaata acagataaga taataataaa gaaacgatag gtgttaaata aagagacatt
    12781 gttgcatcag agacaccaac tgacttcaca atataagcaa gcaaaacgta tggaattata
    12841 gtagggaata tagctaaata aagtaccgat actattgatg taaaagtggc gccgtgtata
    12901 tcgttgatga tttcaggaat aaaaataagc ataaatggtg agcttgccat tattgtatat
    12961 agtgtgaaag cgatgaagcc gtatttttct atgtattttt tctggaaagt aaaatacaaa
    13021 ctttcactaa aagatgcaag taaaataata aaaacaccta atacattaat agttgtgtaa
    13081 tcatctttac ttattgaaat aatggatatt cctataaatg cgacgagtga acttaaccaa
    13141 ttccattttg aaaaatgctc ttttaaaaat atataagcta aagcactaga aaaaataggc
    13201 gttgtagaga ctagaattcc agatatacct gcactaatca aagtttcacc aaaatttaaa
    13261 gctgtgtgat atatcacaaa tccacaaaat cctaaaataa aaataacagg gatatctctt
    13321 agttcagggg taggcaattt ctttataatt acgaacggca agagaattat tgttgctaaa
    13381 attaaacgaa atgccgacaa tgattctgca ctaaaatcat ttaacgcaat ctttatcatt
    13441 ggaaatgcag atccccacaa tatgatagta aataaatatg atagaaaagt agtgtctcga
    13501 agtttattca ttaatatcat cactccttta attatgtgtt tctatattaa aaaatatgat
    13561 ttaaaatgag tacaaccaat tttgaatgga tttacctatc caattttaaa agggagggag
    13621 aagatggcta aatataaaga tattgctagt gacataagag ataaaataat cacaggggat
    13681 tggttttatg gaatgaaaat accttcacat aggcagttgg cgatacagta caacgtaaat
    13741 agagtaacga ttattaaaag tattgagtta ttagaagctg aaggatttat ctatactaaa
    13801 gtaggtagtg gaacatatgt taatgactat ttgaatgaag cacatattac aaataagtgg
    13861 tctgaaatga tgttatggtc ctctcaacaa agaagtcagt atacggtgca attaattaat
    13921 aaaattgaga cagatgattc gtatatacat ataagtaaag gtgaattggg tatatcgtta
    13981 atgccacata ttcaattgaa aaaagccatg tctaatacag ccagtcatat tgaagactta
    14041 tcttttggtt ataataatgg ctatggttat atcaagttaa gagatattat cgttgaacga
    14101 atgtcaaagc aaggtataaa tgtaggtaga gaaaatgtaa tgatcacttc aggcgcttta
    14161 catgccattc aacttttatc tattgggttt ttaggtcaag atgccataat aatttcgaat
    14221 acaccatcat atattcactc tacaaatgtt tttgagcaat tgaattttag acatattgat
    14281 gttccttata atcaaattaa tgaaattgat accatcattg atagatttat taattttaaa
    14341 aataaagcga tttatataga acctaggttt aataacccga caggtcgttc tttaacgaat
    14401 gagcaaaaga aaaatataat tacttatagc gaaagacata atattcctat cattgaagat
    14461 gatatcttta gagatatttt ctttagcgat ccaactcctt ctatcaaaac ttatgataaa
    14521 ttgggaaaag ttatacatat aagcagtttt tcaaaaacga ttgcaccagc aataagaata
    14581 ggttggattg ttgcttctga aaaaataata gagcaattgg cagatgtaag aatgcaaatt
    14641 gactatggat ccagtatttt gtcacaaatg gttgtatatg agatgttgaa aaataagtct
    14701 tatgataaac acttagtaaa gttaaggtat gttttaaaag ataaacgaga ctttatgtta
    14761 aacatcctca ataatttatt taaggatata gcacattggg aggttccaag tggaggttat
    14821 tttgtatggt tag
//
LOCUS       DALPQQ010000061        14706 bp    DNA     linear   BCT 22-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus strain K18-6-464
            SAMD00233528-rid16434743.denovo.061, whole genome shotgun sequence.
ACCESSION   DALPQQ010000061 DALPQQ010000000
VERSION     DALPQQ010000061.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMD00233528
            Sequence Read Archive: DRR236061
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 14706)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 14706)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001543423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001543423.1
            Genome Coverage       :: 77x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/22/2022 17:09:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,811
            CDSs (total)                      :: 2,743
            Genes (coding)                    :: 2,689
            CDSs (with protein)               :: 2,689
            Genes (RNA)                       :: 68
            rRNAs                             :: 2, 4, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 4, 2 (16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 54
            CDSs (without protein)            :: 54
            Pseudo Genes (ambiguous residues) :: 0 of 54
            Pseudo Genes (frameshifted)       :: 27 of 54
            Pseudo Genes (incomplete)         :: 27 of 54
            Pseudo Genes (internal stop)      :: 10 of 54
            Pseudo Genes (multiple problems)  :: 10 of 54
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..14706
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMD00233528-rid16434743.denovo.061"
                     /strain="K18-6-464"
                     /db_xref="taxon:1280"
                     /geo_loc_name="Japan: Niigata"
     gene            49..327
                     /locus_tag="O7798_001529"
     CDS             49..327
                     /locus_tag="O7798_001529"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501360.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR04197 family type VII secretion effector"
                     /protein_id="HDC2863791.1"
                     /translation="MMSTVQSDIFKTNSASSSIKSAVETCNNVSKPDKDESTTVSGNN
                     NAHSVIDDLMSKNQSVAEAIRTASDNIQKVGEAFDQTDVMIGNEIGKN"
     gene            342..710
                     /locus_tag="O7798_001530"
     CDS             342..710
                     /locus_tag="O7798_001530"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501359.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDC2863792.1"
                     /translation="MSNKLDEINKIITAKHEQMDDLYDEKREVKALIDESDALNHSID
                     QLYQHLGERYYSSNMASRMEQFRDEFHFAKRRSTEALYEQQQQIQHGIRKVEEEMIDL
                     EMRRNVEIETVTKEENKWKQ"
     gene            698..994
                     /locus_tag="O7798_001531"
     CDS             698..994
                     /locus_tag="O7798_001531"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501358.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4176 domain-containing protein"
                     /protein_id="HDC2863793.1"
                     /translation="METIGSIIYLKEGSQKLMIINRGPIVEIENQKYMFDYSACKYPI
                     GVVEDEIYYFNEENIDSVIFKGYSDQDEVRFQELFENMKQNLDSEIQRGEVTQQ"
     gene            1328..2434
                     /locus_tag="O7798_001532"
     CDS             1328..2434
                     /locus_tag="O7798_001532"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501357.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-binding domain-containing protein"
                     /protein_id="HDC2863794.1"
                     /translation="MQHHKVAIIGAGAAGIGMAITLKDFGITDVIILEKGTVGHSFKH
                     WPKSTRTITPSFTSNGFGMPDMNAISMDTSPAFTFNEEHISGETYAEYLQVVANHYEL
                     NIFENTVVTNISVDDAYYTIATTTEIYHADYIFVATGDYNFPKKPFKYGIHYSEIEDF
                     DNFNKGQYVVIGGNESGFDAAYQLAKNGSDIALYTSTTGLNDPDADPSVRLSPYTRQR
                     LGNVIKQGARIEMNVHYTVKDIDFNNGQYHISFDSGQSVLTPHEPILATGFDATKNPI
                     VQQLFVTTNQDIKLTTHDESTRYPNIFMIGATVENDNAKLCYIYKFRARFAVLAHLLT
                     QREGLPAKQDVIENYQKNQMYLDDYSCCEVSCTC"
     gene            2428..3768
                     /locus_tag="O7798_001533"
     CDS             2428..3768
                     /locus_tag="O7798_001533"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000895187.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ferrous iron transporter B"
                     /protein_id="HDC2863795.1"
                     /translation="MLEVKYDMRTGHYTPIPNEPHYLVISHADKLTATEKAKLRLLII
                     KQKLDISLAESVVSSPIASEHVIEQLTLFQHERRHLRPKISATFLAWLLIFLMFALPI
                     GIAYQFSDWFQNQYVSAWIEYLTQTTLLNHDILQHILFGDYGVLSLGTYSLVWALPVV
                     ILISLSTAIIDQTGLKSWMIWAIEPSMLWIGLQGNDIVPLLEGFGCNAAAISQAAHQC
                     HTCTKTQCMSLISFGSSCSYQIGATLSIFSVAGKSWLFMPYLILVLLGGILHNRIWLK
                     KNDQQLSVPLPYDRQLHMPNIRQMLLQMWQNIQMFIVQALPIFITICLIVSILSLTPI
                     LNVLSQIFTPILSLLGISSELSPGILFSMIRKDGMLLFNLHQGALLQGMTATQLLLLV
                     FFSSTFTACSVTMTMLLKHLGGQSALKLIGKQMVTSLSLVIGVGIIVKIVMLII"
     gene            3866..4756
                     /locus_tag="O7798_001534"
     CDS             3866..4756
                     /locus_tag="O7798_001534"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501354.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GTP-binding protein"
                     /protein_id="HDC2863796.1"
                     /translation="MKIVIIGGFLGGGKTTVLNHLLAESLKESLKPAVIMNEFGKMSV
                     DGALVSEDIPLSELTEGCICCAMKADVSEQLHQLYLKEQPDIVFIECSGIAEPVSVLD
                     ACLTPILAPFTTITHMIGVIDASMYKHIKSFPKDIQGLFYEQLAYCSVLFVNKIDSAD
                     VETTSKLLKDLEVINPEADIQVGMHGSVTLPISVRQMTATSDNKHKSLHQMINHQFVQ
                     SPVKCTKAEFIKRLACLPSHIYRLKGFMTFEDTAHTYLIQFTQGQYELTPVAFSKKVP
                     EYLVLIGKGISKEDYQCLEQ"
     gene            complement(4903..5733)
                     /locus_tag="O7798_001535"
     CDS             complement(4903..5733)
                     /locus_tag="O7798_001535"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501353.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HDC2863797.1"
                     /translation="METLELQGAKLRYHQVGQGPVLIFIPGANGTGDIFLPLAEQLKD
                     HFTVVAVDRRDYGESELTEPLPDSASNPDSDYRVKRDAQDIAELAKSLSDEPVYILGS
                     SSGSIVAMHVLKDYPEVVKKIAFHEPPINTFLPDSTYWKDKNDDIVHQILTEGLEKGM
                     KTFGETLNIAPIDAKMMSQPADTEEGRIEQYKRTMFWSEFEIRQYTHSDITLDDFTKY
                     SDKITLLNGTDSRGSFPQDVNFYINKETGIPIVDIPGGHLGYIQKPEGFADVLLNMWG
                     "
     gene            complement(5753..6763)
                     /locus_tag="O7798_001536"
     CDS             complement(5753..6763)
                     /locus_tag="O7798_001536"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501352.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase"
                     /protein_id="HDC2863798.1"
                     /translation="MKSITFEEHYVIEDIQKETMNAISADPKGVPMKVMLEGLEKKTG
                     FTNADELSHHDERIQFMNNQDVQIQVLSYGNGSPSNLVGQKAIELCQKANDQLANYIA
                     QYPNRFVGFATLPINEPEAAAREFERCINDLGFKGALIMGRAQDGFLDQDKYDIIFKT
                     AENLDVPIYLHPAPVNSDIYQSYYKGNYPEVTAATFACFGYGWHIDVGIHAIHLVLSG
                     IFDRYPKLNMIIGHWGEFIPFFLERMDEALFAEHLNHPVSYYFKNNFYITPSGMLTKP
                     QFDLVKKEVGIDRILYAADYPYIEPEKLGVFLDELVLTDEEKEKISYTNGAKLLGLSP
                     NN"
     gene            complement(6861..7565)
                     /locus_tag="O7798_001537"
     CDS             complement(6861..7565)
                     /locus_tag="O7798_001537"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501351.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /protein_id="HDC2863799.1"
                     /translation="MTKIVLITGGNKGLGYASAEALKALGYKVYIGSRNDVRGQQASQ
                     KLGVHYVQLDVTSDYSVKNAYNMIAEKEGRLDILINNAGISGQFSAPSKLTPRDVEEV
                     YQTNVFGIVRMMNTFVPLLEKSEQPVVVNVSSGLGSFGMVTNPETAESKVNSLAYCSS
                     KSAVTMLTLQYAKGLPNMQINAADPGATNTDLVGDFSNNSKHVSEGIKPIIQLATIGA
                     DGPTGTFINGDGEMPW"
     gene            complement(7558..8115)
                     /locus_tag="O7798_001538"
     CDS             complement(7558..8115)
                     /locus_tag="O7798_001538"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501350.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TetR/AcrR family transcriptional regulator"
                     /protein_id="HDC2863800.1"
                     /translation="MRKDAKENRQRIEEIAHKLFDEEGVENISMNRIAKELGIGMGTL
                     YRHFKDKSDLCYYVIQRDLDIFITHFKQIKDDYHSNYEVMQVSLDYLLQFKIDNKALL
                     QCIEAGNNKLRFYQSAFYQELFDFYYDLFKSDDDTYTKFKTDMLLQSLSTSVFAFQIE
                     HRHISIEAYRNYLLNIYLDEVGRND"
     gene            8246..8545
                     /locus_tag="O7798_001539"
     CDS             8246..8545
                     /locus_tag="O7798_001539"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501349.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2316 family protein"
                     /protein_id="HDC2863801.1"
                     /translation="MSLNKEQRRITAEELQAHFEASTLSVQMIAEKLNVTTEDVEKVL
                     AMTAPLGIFSHQLQRFIHLVWDVRDVINDNIKGNGQTPEPYTYLKGEKEDYWFLR"
     gene            8565..9386
                     /locus_tag="O7798_001540"
     CDS             8565..9386
                     /locus_tag="O7798_001540"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501348.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NmrA/HSCARG family protein"
                     /protein_id="HDC2863802.1"
                     /translation="MKDILVIGATGKQGNAVVKQLLEDGWYVSALTRNKNNRKLSDIG
                     HPHLSIVEGDLSDNVSLQSAMKGKYGLYSIQPIVKDDVSEELRQGMKIIEIAEQENIQ
                     HIVYSTAGGVNRNRTGPHFEVLAKIENRLMESNINATVIKPSFFMDNFLRIAKVEDER
                     ITLPEFINPNIKFTMISSIDIAKIASYIFAHPQSFTHQSIEIGSDEVTLSEAATIFSE
                     VTGKSTVIEGEFVSGVAEKQWLEEKGYEVDFELMAEINPTRLSLSDWLKVQNYNK"
     gene            9403..9780
                     /locus_tag="O7798_001541"
     CDS             9403..9780
                     /locus_tag="O7798_001541"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501347.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HDC2863803.1"
                     /translation="MIQSMWFNLHVQDLEKSAQFYKALGFKINRNPQMLDKMVGIQIG
                     QTTVILIENKHFQNVSQQSLNTEPNEVMISLGVNTNEEVDQLVNKVKEAGGTVVQEPT
                     VSQGFYGAMFKDLDGHHFNFLVC"
     gene            complement(9930..10160)
                     /locus_tag="O7798_001542"
     CDS             complement(9930..10160)
                     /locus_tag="O7798_001542"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501346.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF896 domain-containing protein"
                     /protein_id="HDC2863804.1"
                     /translation="MKILDRINELANKEKVQPLTVAEKQEQHALRQDYLSMIRGQVLT
                     TFSTIKVVDPIGQDVTPDKVYDLRQQYGYIQN"
     gene            complement(10380..10880)
                     /locus_tag="O7798_001543"
     CDS             complement(10380..10880)
                     /locus_tag="O7798_001543"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501345.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDC2863805.1"
                     /translation="MTSIFVFAYLNNTSGNMLFRQQMICACLLANVRHSSIVCLNNIC
                     CIVDMRCLNTKIGGIDVSETDEPQGFERTHNILNINQSSLGVVTYITNKLKSTLKQHI
                     IIARGKKRIDYRLSYNFYTTYYDNVEIKKIDCEYTYAMPIAILIRHTMSFDNAHFFAQ
                     LRHPVL"
     gene            complement(11078..11647)
                     /locus_tag="O7798_001544"
     CDS             complement(11078..11647)
                     /locus_tag="O7798_001544"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501344.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TetR/AcrR family transcriptional regulator"
                     /protein_id="HDC2863806.1"
                     /translation="MMESKSIDPRIVRTKQLLVDAFLKISREKKLSQITVKDITDIAT
                     LNRATFYAHFTDKEDLLDYTLSVTILKDLNDNLSISNVINEKVLRNIFISIASYIKDA
                     AKSCELNSEAFCNKAHQRINNELEDIFAIMLENSYPEHQRDIIVNSASFLAAGISGLA
                     LHWFNTSQETADVFIDRNLPFLIHHIAHF"
     gene            11802..11930
                     /locus_tag="O7798_001545"
     CDS             11802..11930
                     /locus_tag="O7798_001545"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501342.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDC2863807.1"
                     /translation="MDFKNEDKIKVYCNNMFEKLPISLSKNSEFCDILFFIVLSYR"
     gene            12057..13112
                     /locus_tag="O7798_001546"
     CDS             12057..13112
                     /locus_tag="O7798_001546"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501341.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS transporter subunit IIC"
                     /protein_id="HDC2863808.1"
                     /translation="MTSIKTITPKDFIFRVLSGVAIGIVAGLVPNAILGEIFKYFMDY
                     HPIFKTLLGVVVAIQFTVPALIGALVAMKFDLSPLAIAVVASAAYVGSGAAQFKNGAW
                     MITGIGDLINTMITAAIAVLFILLIQHRVGSMALIVFPTVVGGISGAIGVLILPYTKM
                     ITTAIGNMVNGFTELQPIVMSILISMVFSLIIISPLSTVAIAFAIGITGLAAGSASIG
                     ISATEAVLIIGTSKVNRLGVPLSVFFGGVKMMIPNMVKYPILMLPILTTAIVSGLVSA
                     LVGIHGTKESAGFGFIGMVGPINAFKFMEVDSAWLSVLLIVVAFFVVPFVTAWLADII
                     YRKVFRLYTNDIFKFMG"
     gene            13720..14421
                     /gene="isaA"
                     /locus_tag="O7798_001547"
     CDS             13720..14421
                     /gene="isaA"
                     /locus_tag="O7798_001547"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501340.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lytic transglycosylase IsaA"
                     /protein_id="HDC2863809.1"
                     /translation="MKKTIMASSLAVALGVTGYAAGTGHQAHAAEVNVDQAHLVDLAH
                     NHQDQLNAAPIKDGAYDIHFVKDGFQYNFTSNGTTWSWSYEAANGQTAGFSNVAGADY
                     TTSYNQGSNVQSVSYNAQSSNSNVEAVSAPTYHNYSTSTTSSSVRLSNGNTAGATGSS
                     AAQIMAQRTGVSASTWAAIIARESNGQVNAYNPSGASGLFQTMPGWGPTNTVDQQINA
                     AVKAYKAQGLGAWGF"
BASE COUNT         4910 a         2312 c         2686 g         4798 t
ORIGIN      
        1 atacagtttc taataatttt aaaataattt aaatggagag aggtgtaaat gatgagtaca
       61 gttcaaagtg atatttttaa gaccaatagt gcatcatcat ctattaaaag cgctgttgaa
      121 acatgtaata atgtgtcgaa accggataaa gatgaaagta caacagtaag tggaaataat
      181 aatgctcata gtgtgataga tgatttgatg agtaagaatc aatctgttgc tgaagcaata
      241 cgaactgcga gcgataatat acaaaaagtt ggtgaggctt ttgaccaaac tgacgtaatg
      301 attggtaatg aaattggtaa aaattaaaac gtggtgaaat gatgtcgaat aaactggatg
      361 aaatcaataa aataatcaca gcgaaacatg agcaaatgga tgacttatat gatgaaaagc
      421 gagaggttaa agcattgata gatgaaagtg atgcgcttaa tcattcgata gatcaattat
      481 atcaacattt aggtgagcgt tattatagta gcaatatggc tagtcgtatg gaacagttcc
      541 gcgatgaatt tcattttgcg aaacgacgtt caacggaagc gttatacgag cagcaacagc
      601 aaattcaaca tggcattcgt aaagtggaag aagagatgat tgacttggaa atgcgaagga
      661 atgttgaaat tgagacggtg acaaaggagg aaaataaatg gaaacaatag gaagcattat
      721 ttatttaaaa gaaggttcgc aaaagttaat gattattaat agaggaccaa ttgtagaaat
      781 tgaaaatcaa aagtatatgt ttgactattc tgcatgtaaa tatccgattg gtgttgtaga
      841 agatgaaatt tattatttta acgaggaaaa tatagattca gttattttta aaggttattc
      901 tgatcaagat gaggttagat ttcaagagtt gtttgaaaat atgaaacaaa atttggatag
      961 tgaaatacaa cgtggagaag ttacacaaca ataaagaaat actttttctt tattggggtg
     1021 ggacgacgaa ataaattttg taaaaatatg atttctgtct caccgccaaa atgttatctc
     1081 caagtactga ggctggatga taccatgaaa tgtcattcat aatcatttga actaaacgta
     1141 gcagccttaa attttaaaaa aagacacata ccaacttccg aaatgtagat gaattctcta
     1201 caataacgga agtttttctt ttaatattga aatttctcaa ggataggtct atactttata
     1261 aatcgtaatt attacgattt ataatcaaaa acaataactt gaaatagatc attgagggag
     1321 tgttaatatg caacatcata aagtggctat tatcggtgcc ggtgctgcag gtataggtat
     1381 ggccattacc ttaaaagatt tcggtataac agatgtcatt attttagaaa aaggaacagt
     1441 aggacattca tttaaacatt ggccgaaatc gacccgtacg atcacgccat catttacgtc
     1501 taatggattt ggcatgcctg atatgaatgc aatttccatg gatacttcac cagcatttac
     1561 atttaatgaa gaacatattt ccggagaaac atatgctgaa tatttacaag tggttgccaa
     1621 ccattacgag ctgaatatct ttgaaaatac agttgtcaca aatatatctg tagatgatgc
     1681 atattatacg attgcaacga caacagagat atatcacgcg gattatatct ttgtcgcaac
     1741 aggtgattat aatttcccta aaaagccatt taaatatggt attcattata gtgaaattga
     1801 agactttgat aactttaata aggggcaata tgtggttatc ggaggtaatg aaagtggctt
     1861 tgatgctgca tatcaacttg caaaaaatgg ctctgacatc gcactttata ctagcacaac
     1921 cggtttaaat gatccggatg ctgatcctag tgttagattg tcaccttata cacgtcagcg
     1981 actaggtaat gtcattaagc aaggtgctcg catcgaaatg aatgtacatt atacagttaa
     2041 agatattgat tttaacaatg gacagtatca tatcagtttt gatagcggac aaagtgtgct
     2101 tacacctcat gaaccaatac tagcaactgg ctttgatgca acaaaaaatc caatcgttca
     2161 acaattattt gtgacaacaa atcaagatat taaattaaca acacatgatg aatcgacacg
     2221 ttatccgaat atttttatga ttggtgcaac agttgaaaat gataatgcca aattatgcta
     2281 tatctataaa tttagagcgc gatttgcagt acttgcacat cttttaacac agcgggaagg
     2341 cttaccagct aaacaagatg tcattgaaaa ttatcaaaaa aatcaaatgt atttagatga
     2401 ttattcatgt tgtgaagtgt catgcacatg ttagaagtga aatatgatat gagaactggg
     2461 cattatacgc ccatacctaa tgaacctcat tatttggtta ttagtcatgc ggataaactt
     2521 accgcaacag aaaaagcgaa attaagatta ttaatcataa aacagaaatt agatatttca
     2581 ttggcagaaa gtgtagtttc ttcgcctata gcgagtgaac atgtgataga acaattgaca
     2641 ctatttcaac atgagcgacg acatttaaga cctaaaataa gtgcgacatt tttagcctgg
     2701 ttgttgatat ttttaatgtt tgcattgcca atcggtatcg cttatcaatt ttcagattgg
     2761 tttcaaaatc agtatgtgtc agcatggata gaatatttaa ctcaaacaac attgctcaat
     2821 cacgatatat tacagcatat attatttggt gattatggtg tgctatcact tggaacatat
     2881 tcgctcgtat gggcattgcc ggttgtaata ttgattagtt tatcaactgc tataattgat
     2941 caaacaggac tcaaatcatg gatgatatgg gcaattgaac cgtcaatgtt atggatagga
     3001 ttacaaggta atgatatcgt gccactatta gaagggtttg gatgtaatgc agcagctatt
     3061 tcacaagcag cacaccaatg ccatacctgc acgaagacac agtgtatgag tttaataagc
     3121 tttggtagtt cttgtagtta tcaaataggt gcgacattat ctatttttag tgtagctgga
     3181 aagtcatggc tatttatgcc gtacttaata ttagtacttt taggtggcat cttacataat
     3241 aggatatggt tgaaaaagaa tgatcaacaa cttagcgttc cgctacctta tgataggcaa
     3301 ttacatatgc caaatatacg tcaaatgttg ctacaaatgt ggcaaaatat acaaatgttt
     3361 atcgttcaag cgctacctat ttttatcaca atctgtctta ttgttagtat tttatcacta
     3421 acgccaattt tgaatgtttt atcacaaata tttacaccta tattatcgtt attaggcatc
     3481 tcgtcagaat tgtcaccagg gattttattt tcaatgattc gaaaagacgg catgctcttg
     3541 tttaatttgc atcagggcgc cttattacaa ggaatgacag caacacagtt actactactt
     3601 gtgtttttta gttcaacatt tacagcgtgc tcggtcacaa tgacgatgct tttgaaacat
     3661 ttaggtggtc agtcagcact aaaattaatt ggaaagcaaa tggtgacatc attgtcttta
     3721 gttattggtg taggcatcat tgttaaaata gtaatgctga ttatttaaaa aaaatgaact
     3781 ataactgaat atagagtcat gtcagtcaat aggagatcta tcttggaata tgctattcat
     3841 atgaagtata agaggagagt cgcagatgaa aatagttatt ataggtgggt ttttaggtgg
     3901 cggtaaaacg actgtcttaa atcatttgct cgctgaatca ttaaaggaat cgctgaaacc
     3961 agcagtcatc atgaatgaat ttgggaaaat gagtgttgat ggtgccttag tatctgaaga
     4021 cataccttta agtgaactga cagaggggtg tatctgttgt gcaatgaaag cagatgtatc
     4081 agaacagtta catcaattat atttaaaaga gcaaccagac attgtattta ttgaatgtag
     4141 tgggattgca gaaccggtct ctgtcttaga tgcttgttta acgcctattt tagctccgtt
     4201 tacaacaatt acacatatga ttggtgtaat agacgcaagc atgtataaac acattaaatc
     4261 attccctaaa gacatccaag gcttatttta tgagcaatta gcatattgtt ctgtcttatt
     4321 tgttaataaa atagattcag cagatgttga aacaacgagc aaactattga aagatttaga
     4381 agttattaac ccagaggccg atatacaagt cggtatgcat ggcagcgtca ctttgccaat
     4441 atcagttaga caaatgacag caacttctga caataaacat aagtctttac atcaaatgat
     4501 taatcatcaa tttgtgcaat caccagtcaa atgtactaaa gcagagttta taaaacgttt
     4561 agcatgcctt ccgtctcata tttataggtt gaaagggttt atgacatttg aagacaccgc
     4621 acatacgtat ctcattcaat ttacacaagg acaatatgaa ttaacacctg tagcattttc
     4681 aaaaaaagtg ccagaatatt tggtgcttat cggaaagggt atttcaaaag aagactatca
     4741 atgtttggaa cagtagtgtt ttcagtggaa gagaatggtt aacatgcctt catgtataat
     4801 aacgagttga tttgaacgtt taagcgtaaa taaaaataag cttggtcagc catcaaatat
     4861 aatttgaaaa ctgtccaagc tgttttatta gagaacaatc aattaacccc acatatttaa
     4921 taatacatca gcaaagcctt caggtttttg aatataacct aagtgaccgc ctggaatatc
     4981 tacaataggt atgccagttt ctttatttat ataaaagtta acatcttgtg ggaaggagcc
     5041 tctagaatct gtcccattta gtagggtgat tttatcgctg tattttgtga aatcatccaa
     5101 agtaatatct gaatgcgtat attgtctaat ttcaaattct gaccagaaca tcgtacgttt
     5161 gtactgttct atacgtcctt cttcagtatc agcaggttga gacatcattt ttgcatcaat
     5221 tggtgcgata tttaatgttt cgccaaatgt tttcatgcct ttttctaagc cttctgttaa
     5281 aatttgatgc acaatgtcat catttttatc tttccaataa gtactgtctg gtaaaaatgt
     5341 attaattggt ggttcgtgaa atgcaatctt tttaacgact tcagggtaat cttttaacac
     5401 atgcatcgca acgattgaac ctgaacttga acctaatata tagacaggtt catcacttaa
     5461 tgactttgca agttcggcaa tgtcctgtgc gtcgcgtttg acacgataat cactgtcagg
     5521 gtttgaagcg gaatcaggga gtggttcagt taactcgctt tctccataat cacgacgatc
     5581 aacggctaca acagtaaaat ggtcttttaa ctgttctgca agaggcagaa aaatgtctcc
     5641 ggtaccgttt gcaccaggaa taaagatgag cacgggtcct tgtccgactt ggtggtatcg
     5701 taatttagcg ccttgtaatt ctaaagtttc catattcaat gacctccatt tgttaattgt
     5761 taggtgataa acctaataat ttagcaccat ttgtataact tattttctct ttttcttcat
     5821 ctgttaaaac cagttcatct aaaaatacac ctaatttttc aggctcaata tatggataat
     5881 cagcagcata aagaattcta tcaataccta cttctttctt gactaaatca aactgtggct
     5941 tcgttaacat gccactcggt gtgatataaa aattattttt aaagtaatag cttacagggt
     6001 ggttcaaatg ttcagcgaat aaagcttcat ccatacgttc taagaagaat gggataaact
     6061 caccccaatg tccaataatc atatttaact ttggataacg atcaaaaata ccagataata
     6121 ctagatgtat tgcatgaatg ccgacatcaa tgtgccaacc ataaccaaaa caagcaaatg
     6181 ttgccgcagt tacttcagga taatttcctt tatagtatga ttgataaatg tcactgttaa
     6241 ctggcgcggg atgtagataa atcggtacgt ctaaattttc agctgttttg aaaataatgt
     6301 catatttgtc ttgatcaaga aaaccatctt gtgcacgtcc cataatgagc gcacctttga
     6361 atcctaaatc attgatgcaa cgttcgaatt ctcgcgctgc ggcttcaggc tcattgatag
     6421 gtaaagttgc aaagcctaca aagcgattgg gatattgtgc aatatagttt gccaattgat
     6481 catttgcttt ttgacataat tcaatggctt tctgaccaac caaatttgaa ggagaaccat
     6541 ttccataaga taagacttga atttgaacgt cttgattatt cataaattgg atacgttcat
     6601 catgatgtga taattcgtcg gcatttgtaa aacctgtctt tttttcaagg ccttctaaca
     6661 ttactttcat cggtacacct ttaggatctg ctgatatcgc attcatcgtt tctttttgaa
     6721 tatcttcaat gacataatgt tcttcaaacg taatactttt catttacttc gcctccatat
     6781 tgtattgcat gtttattgca tctattgcag aagcattttt tatatacctc taatttcaat
     6841 gtttgtaaca taaaattgat ctaccaaggc atctctccat cgccattaat aaatgtacct
     6901 gttgggccat ctgcaccaat cgttgctaat tgaatgattg gcttgattcc ttcagaaacg
     6961 tgtttggaat tattactaaa atcaccaact aaatcagtat ttgtagcgcc tggatcagca
     7021 gcattgattt gcatgttagg taatccttta gcgtattgta gcgttagcat tgttactgcc
     7081 gatttagacg aacaataagc taatgaattc actttagatt cagctgtttc ggggtttgta
     7141 accattccaa atgaacctaa accacttgat acgttgacga caacaggttg ttcagatttt
     7201 tctaagagag ggacgaatgt attcatcatt cgtacgatac cgaatacatt cgtttgatat
     7261 acttcttcaa cgtcacgagg tgtcaatttg gaaggtgctg aaaattgacc agatatacct
     7321 gcattgttaa tgaggatatc aagacggcct tctttttcag caatcatgtt ataagcattt
     7381 ttgactgagt agtcacttgt aacatctaat tgtacataat gaacacctaa tttttgtgat
     7441 gcttgttgtc ctcttacatc attccgagaa cctatataaa ctttgtaacc caatgcttta
     7501 agtgcctctg cacttgcata gcctaaccct ttattgcctc ctgtgattaa cacaatttta
     7561 gtcattacgt cccacctcat ctaaataaat gtttaataaa taatttctgt acgcttcaat
     7621 tgaaatatgg cgatgctcta tttggaaggc aaatacacta gttgataatg attgcaacag
     7681 catatctgtt ttgaacttcg tgtaagtgtc gtcatcgctt ttaaataagt cataataaaa
     7741 atcaaataat tcttgataaa atgcgctttg gtaaaaacgt aatttattgt tgcctgcttc
     7801 aatacattgc agtagtgcct tattatcgat tttaaattgt aaaagataat ctaacgacac
     7861 ttgcataacc tcataattag aatgatagtc atctttaatt tgcttaaaat gagtgataaa
     7921 aatatcaagg tctctttgta tgacgtagta gcataaatcg cttttatctt tgaaatgtcg
     7981 atacaatgtc cccataccga tacctagttc tttagcaata cgattcatac taatgttttc
     8041 aacgccttct tcatcaaaaa gtttgtgcgc tatttcttca attcgttgcc tattctcttt
     8101 tgcatctttt cgcatgatta cacctactta aaattctcta aaattgacaa acggataact
     8161 ctccgtttat tataaaacgt gttaagaaag ttagcaatga atttgcaata actattaaat
     8221 atcataaaag aaaagagtgt tgataatgtc tttaaataaa gagcaaagac gcatcacagc
     8281 tgaagagttg caagcacatt tcgaagcatc taccttatcg gttcaaatga ttgctgaaaa
     8341 actgaatgtc actacagaag atgtggaaaa agtattagct atgacagcgc cactaggcat
     8401 ttttagtcat caattacaac gatttattca tttagtatgg gatgtcagag atgtaataaa
     8461 cgacaatatt aaaggaaatg gacaaacacc agaaccatat acgtatttaa aaggtgaaaa
     8521 agaggactat tggtttttaa gataaaaaga ggagtggatc taaaatgaaa gatattttag
     8581 taataggcgc aacagggaag caaggtaatg cagttgtaaa acagttgtta gaggatggat
     8641 ggtatgtaag tgcattaact agaaataaga ataatcgtaa actttcagac ataggacatc
     8701 cgcatttatc aatcgttgaa ggtgatctga gtgataatgt tagtttgcaa tcagcgatga
     8761 aaggtaagta tggcttatac agtattcagc caatcgttaa agatgatgtt agcgaagaat
     8821 taagacaagg tatgaagata attgaaatag ctgagcaaga aaatattcaa catattgtgt
     8881 atagtactgc gggaggggtt aatcgaaatc gaactggccc acactttgaa gtactagcaa
     8941 aaatagaaaa tagattaatg gaatctaata taaatgcaac agttatcaaa ccatcattct
     9001 ttatggataa ttttttacgc attgctaaag tcgaagatga acgtattaca ttaccagaat
     9061 ttattaatcc gaatataaaa ttcacaatga tttcttctat tgatatagct aaaattgcat
     9121 cgtatatttt tgcacatcca caaagcttta cgcatcaatc aatagagatt ggttccgatg
     9181 aagttacatt aagtgaagca gcaacaattt ttagtgaagt gacaggtaaa tctactgtta
     9241 tagaaggaga atttgttagt ggtgttgcag aaaagcaatg gttggaagaa aaaggttatg
     9301 aagtagactt tgaattaatg gctgaaataa atccaacaag attatcatta agtgattggc
     9361 ttaaagtcca aaactataat aagtaatgaa tggggtgcaa tcatgattca atcaatgtgg
     9421 tttaatttgc atgtgcaaga tttagaaaag agcgcacagt tttataaagc gttaggattt
     9481 aaaataaata gaaacccaca aatgttagat aaaatggtcg gcattcaaat aggtcaaaca
     9541 accgtaattt taatagaaaa caagcatttt caaaatgtaa gtcagcaaag ccttaatact
     9601 gaaccaaatg aagtgatgat ttctctaggt gtgaacacaa atgaagaagt tgaccagttg
     9661 gtgaataaag tgaaagaagc gggtggcaca gtcgttcaag aaccaacagt aagccaaggg
     9721 ttttatggag caatgttcaa agatcttgat ggacaccatt ttaatttttt ggtctgctaa
     9781 aatgaaattc tcaaaagaat aaataaaaag cccatacaga gatgaagcgt aatgtgcacc
     9841 atggtgcgac acattagtgt cttcaatcag tatgggcttt gtttatgagg tcagttggca
     9901 ccttaagtgc aatacctcgt gagcaaatat taattttgaa tataaccgta ttgttggcga
     9961 agatcataaa ctttatctgg tgtgacatcc tgaccgattg gatcaaccac ttttattgtg
    10021 gaaaatgttg ttaatacttg tcctcggatc atgcttaagt agtcttgacg caatgcatgt
    10081 tgttcttgtt tttcagctac agtaagtggt tgtacttttt ctttatttgc aagttcatta
    10141 attctatcta aaattttcat attgtcatat cctccttaga atcaagtgtt gatatatttt
    10201 gagattattt ttatatggta atttatcaac acattaagta atgtttttag tttctcggtc
    10261 ttttgaccag cagatttttg gaattaaaat aagggatttg agacacgatt ttactagtag
    10321 tacgatggca aagtgatgtt attgaagtgt cgtttgatat acatgtctgc aatgttgttt
    10381 tataagacag gatgacgtaa ctgagcaaag aaatgagcat tgtcgaatga catcgtgtgt
    10441 cttattaaaa ttgcaatggg catagcatag gtatattcac agtcgatttt cttgatttct
    10501 acattatcat aatacgtagt gtaaaagtta tacgacagtc gatagtcgat tcgcttttta
    10561 ccacgagcaa ttattatgtg ttgcttcaac gtcgacttta atttatttgt aatgtatgtc
    10621 actacaccca gactactctg attaatattt aatatattat gcgtgcgttc aaacccctga
    10681 ggttcatctg tctcgctcac gtcaatccct cctatcttag tatttaaaca acgcatatca
    10741 actatgcaac atatgttgtt tagacatact atactactat gtcgtacgtt tgccaataaa
    10801 cacgcacata tcatttgttg cctaaacaac atattgcctg aagtgttgtt taagtacgca
    10861 aaaacaaaaa tgcttgtcac taaaatctat atgttttaat gacaagctta ttttcattca
    10921 gttaacgact gctaatatga cattgtagag tataggacgt tgatttatgt cctagacacg
    10981 gctaatcaat cgtaatacgt taaattttat tgtgtgtaca agtatgaacc taagtcacat
    11041 agtgatttca agatgcatga ctaaatacca agttttatta aaaatgtgct atatgatgaa
    11101 ttaaaaatgg aaggttgcga tcgataaaca catcggctgt ctcttgactc gtgttaaacc
    11161 aatgtaatgc taagcctgag ataccagctg ctaaaaaact cgcactattt acaatgatat
    11221 ctcgttgatg ctccggatag ctgttttcta acataatcgc aaaaatatct tctaattcat
    11281 tattaatacg ttgatgtgct ttgttgcaaa atgcttcact atttaattcg caagactttg
    11341 cagcatcttt gatataactc gcaattgaaa tgaaaatatt acgcagaacc ttttcattaa
    11401 tgacattaga aatgctcaaa ttatcattca agtcttttaa aatggttaca gataatgtgt
    11461 agtctaggag gtcttcttta tcagtgaaat gagcgtaaaa tgttgcacga tttagcgtag
    11521 caatatcagt gatatcttta actgtaattt gagataattt cttttctcta gaaattttaa
    11581 gaaaagcatc gacaagcaat tgtttggttc taacgattct tggatctatg gatttacttt
    11641 ccatcatttg ttcactacct aacatctgtt gttttaacac ttattatcag tatcttctat
    11701 tatattgtca attgtgttga tgatatgtaa gtgctgatac gctcctaaca aataatgtac
    11761 ctttttggta agcatttgaa tgtctttctt ctattgtatt aatggatttt aaaaatgaag
    11821 ataaaataaa agtgtattgt aacaatatgt ttgaaaaatt gccaatttct ttatctaaaa
    11881 attcagaatt ttgtgatata ctatttttca tagtcttgag ttatagatga tactgctagc
    11941 ctaaatataa caacatcggc atgcacatct tagaatttaa gctagtggca gcttataact
    12001 taaggctctt tattatttgc atacagatgt atatacataa atggaaggat gatattatga
    12061 catcaattaa aacaattaca cccaaagatt ttatatttag agttttatca ggtgtcgcca
    12121 taggtattgt tgcgggttta gttcctaatg cgatacttgg agaaattttt aaatacttta
    12181 tggattatca tccgattttt aaaacgttat taggcgttgt cgttgcaatt caatttacag
    12241 tacctgcttt gattggtgca ttggttgcca tgaaatttga cctatcgcca ttagcaattg
    12301 ctgttgtggc aagtgcagca tatgtaggaa gcggtgcagc gcagtttaaa aatggtgctt
    12361 ggatgattac gggtattggt gatttaatta atacaatgat tacagcagcg attgcagtgt
    12421 tattcatttt acttattcaa catcgcgtag gtagtatggc attgattgta ttcccaacag
    12481 ttgttggcgg tatttcaggt gcaattggtg ttttaatatt gccgtatacg aaaatgatta
    12541 caacagccat cggtaatatg gttaatggtt ttacagaatt acaaccgatt gtcatgagta
    12601 ttttgatttc aatggtattt agtcttatta ttatttcgcc actatcaact gtggccattg
    12661 cctttgcgat aggtattaca ggtttagcag ctggatcagc gtcaattggt atctccgcga
    12721 ctgaagcagt attgataatt ggtacaagta aagtgaatcg tttaggggtg ccgttatccg
    12781 tcttctttgg aggcgttaaa atgatgatac ctaatatggt gaaatatcca attcttatgt
    12841 taccaatatt aacgacagcc attgtatcag gtttggtatc agcattagta ggtattcatg
    12901 gaacgaaaga gtcagctgga tttggtttta taggaatggt aggaccgatt aatgcattta
    12961 aatttatgga ggttgattct gcttggttga gtgtcttact aattgtagta gcgttctttg
    13021 ttgtaccatt tgtaacagct tggcttgcag atatcattta tcgtaaagtg tttcgtttat
    13081 atactaatga tatttttaaa ttcatgggat aataacagta tgttttttga aaatatgaga
    13141 ccaaaaatta tttaatgtta ttgtgaattg cgagaatgaa gttgaacaat ataattgagc
    13201 tgcagtttat ttgcgctaat aaaagataag acaattcaca aaagatgtgt gttttaaaac
    13261 tttgaatata caacaataat agcaatcaat acatgtgtag aaacatattt gttgattgct
    13321 ttttaattgc gtttaatgta cgaaaataag agaagttaca tgtcagatat attacagcta
    13381 tgtaacaaaa atacaatctg taatattacg aaagctgtaa tagttgagct aaatatagta
    13441 aaaatcttat gtgttaaaga ctatttcaag ggttgattgg attctaaagg gcacatattt
    13501 cacattacag tataaaacag ccatatttca acattacaaa taacacttga tattgtaatg
    13561 ttttgtaaag aaagtgtaat ttactggctg gttttttgtg atatagtgag taccgttgaa
    13621 agaaataaaa gacaatttaa acttgcacta cgacattcaa attcaaaata taattactaa
    13681 aaacataaac ttacaattat tactggagga ttttttacta tgaaaaagac aattatggca
    13741 tcatcattag cagtggcatt aggtgtaaca ggttacgcag caggtacagg acatcaagca
    13801 cacgctgctg aagtaaacgt tgatcaagca cacttagttg acttagcgca taatcaccaa
    13861 gatcaattaa atgcagctcc aatcaaagat ggtgcatatg acatccactt tgtaaaagat
    13921 ggtttccaat ataacttcac ttcaaatggt actacatggt catggagcta tgaagcagct
    13981 aatggtcaaa ctgctggttt ctcaaacgtt gcaggtgcag actacactac ttcatacaac
    14041 caaggttcaa atgtacaatc agtaagctac aatgcacaat caagtaactc aaacgttgaa
    14101 gctgtttcag ctccaactta ccataactac agcacttcaa ctacttcaag ttcagtgaga
    14161 ttaagcaatg gtaatactgc aggtgctact ggttcatcag cagctcaaat catggctcaa
    14221 cgtactggtg tttcagcttc tacatgggct gcaatcatcg ctcgtgaatc aaatggtcaa
    14281 gtaaatgctt acaacccatc aggtgcttca ggtttattcc aaactatgcc aggttggggt
    14341 ccaacaaaca ctgttgacca acaaatcaac gcagctgtta aagcatacaa agcacaaggt
    14401 ttaggtgctt ggggattcta attccttcat aataaataaa agtaatgttt agacattaaa
    14461 tatatagctc ttcccataga aattggggag agttttttta ttaattaaaa atacattttt
    14521 taaaaagtgg atattgaagt tagggaaatt tattggactt tattgtatta ctgctaaaat
    14581 acttgtcttt attaagtgcc aagtggaatg aaacttcatt tgaggctgta ctgagtacac
    14641 tagatacaaa ctaaacgcac attttataat taaattaaat gaaaaaggag ataaaaatgg
    14701 ctataa
//
LOCUS       DALPQQ010000062        14647 bp    DNA     linear   BCT 22-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus strain K18-6-464
            SAMD00233528-rid16434743.denovo.062, whole genome shotgun sequence.
ACCESSION   DALPQQ010000062 DALPQQ010000000
VERSION     DALPQQ010000062.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMD00233528
            Sequence Read Archive: DRR236061
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 14647)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 14647)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001543423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001543423.1
            Genome Coverage       :: 77x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/22/2022 17:09:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,811
            CDSs (total)                      :: 2,743
            Genes (coding)                    :: 2,689
            CDSs (with protein)               :: 2,689
            Genes (RNA)                       :: 68
            rRNAs                             :: 2, 4, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 4, 2 (16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 54
            CDSs (without protein)            :: 54
            Pseudo Genes (ambiguous residues) :: 0 of 54
            Pseudo Genes (frameshifted)       :: 27 of 54
            Pseudo Genes (incomplete)         :: 27 of 54
            Pseudo Genes (internal stop)      :: 10 of 54
            Pseudo Genes (multiple problems)  :: 10 of 54
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..14647
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMD00233528-rid16434743.denovo.062"
                     /strain="K18-6-464"
                     /db_xref="taxon:1280"
                     /geo_loc_name="Japan: Niigata"
     gene            60..632
                     /locus_tag="O7798_001548"
     CDS             60..632
                     /locus_tag="O7798_001548"
                     /EC_number="3.1.1.29"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499054.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminoacyl-tRNA hydrolase"
                     /protein_id="HDC2863810.1"
                     /translation="MKCIVGLGNIGKRFELTRHNIGFEVVDYILEKNNFSLDKQKFKG
                     AYTIERMNGDKVLFIEPMTMMNLSGEAVAPIMDYYNVNPEDLIVLYDDLDLEQGQVRL
                     RQKGSAGGHNGMKSIIKMLGTDQFKRIRIGVGRPTNGMTVPDYVLQRFSNDEMVTMEK
                     VIEHAARAIEKFVETSRFDHVMNEFNGEVK"
     gene            632..4138
                     /gene="mfd"
                     /locus_tag="O7798_001549"
     CDS             632..4138
                     /gene="mfd"
                     /locus_tag="O7798_001549"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499055.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcription-repair coupling factor"
                     /protein_id="HDC2863811.1"
                     /translation="MTILTTLIKEDNHFQDLNQVFGQANTLVTGLSPSAKVTMIAEKY
                     AQSNQQLLLITNNLYQADKLETDLLQFIDAEELYKYPVQDIMTEEFSTQSPQLMSERI
                     RTLTALAQGKKGLFIVPLNGLKKWLTPVEMWQNHQMTLRVGEDIDVDQFLNKLVNMGY
                     KRESVVSHIGEFSLRGGIIDIFPLIGEPIRIELFDTEIDSIRDFDVETQRSKDNVEEV
                     DITTASDYIITEEVISHLKEELKTAYENTRPKIDKSVRNDLKETYESFKLFESTYFDH
                     QILRRLVAFMYETPSTIIEYFQKDAIIAVDEFNRIKETEESLTVESDSFISNIIESGN
                     GFIGQSFIKYDDFETLIEGYPVTYFSLFATTMPIKLNHIIKFSCKPVQQFYGQYDIMR
                     SEFQRYVNQNYHIVVLVETETKVERMQAMLSEMHIPSITKLHRSMSSGQAVIIEGSLS
                     EGFELPDMGLVVITERELFKSKQKKQRKRTKAISNAEKIKSYQDLNVGDYIVHVHHGV
                     GRYLGVETLEVGQTHRDYIKLQYKGTDQLFVPVDQMDQVQKYVASEDKTPKLNKLGGS
                     EWKKTKAKVQQSVEDIAEELIDLYKEREMAEGYQYGEDTAEQTTFELDFPYELTPDQA
                     KSIDEIKDDMQKSRPMDRLLCGDVGYGKTEVAVRAAFKAVMEGKQVAFLVPTTILAQQ
                     HYETLIERMQDFPVEIQLMSRFRTPKEIKQTKEGLKTGFVDIVVGTHKLLSKDIQYKD
                     LGLLIVDEEQRFGVRHKERIKTLKHNVDVLTLTATPIPRTLHMSMLGVRDLSVIETPP
                     ENRFPVQTYVLEQNMSFIKEALERELSRDGQVFYLYNKVQSIYEKREQLQMLMPDANI
                     AVAHGQMTERDLEETMLSFINNEYDILVTTTIIETGVDVPNANTLIIEDADRFGLSQL
                     YQLRGRVGRSSRIGYAYFLHPANKVLTETAEDRLQAIKEFTELGSGFKIAMRDLNIRG
                     AGNLLGKQQHGFIDTVGFDLYSQMLEEAVNEKRGIKEPESEVPEVEVDLNLDAYLPTE
                     YIANEQAKIEIYKKLRKTETFDQIIDIKDELIDRFNDYPVEVARLLDIVEIKVHALHS
                     GITLIKDKGKIIDIHLSVKATENIDGEVLFKATQPLGRTMKVGVQNNAMTITLTKQNQ
                     WLDSLKFLVKCIEESMRISDEA"
     gene            4128..5654
                     /locus_tag="O7798_001550"
     CDS             4128..5654
                     /locus_tag="O7798_001550"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499056.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polysaccharide biosynthesis protein"
                     /protein_id="HDC2863812.1"
                     /translation="MKHKEAFNGVVVLTAALIVIKILSAVYRIPYQNILGDTGLYAYQ
                     QVYPIVALGMILSMNAIPSAITQNIGKYHSDEAYAKAVAYIQLVGILLFIAIFVFANN
                     IAHMMGDGHLTPMIQAASLSFIFIGMLGVLRGYYQSANNMTVPAISQVIEQVIRVGII
                     IVTIVIFVDRGWTIYEAGTIAILASTIGFLGSSIYLVAHRPFKFKMVNNTAKIVWKQF
                     ALSVLIFAISQLIVILWQVIDSVTIIKSLQAIRVPFDVAITEKGVYDRGASFIQMGLI
                     VTTTFSFALIPLLSDAIKMNNQVLMNRYANASLKITILISTAAGIGLINLLPLMNGVF
                     FKTNDLTLTLSVYMITVICVSLIMMDMALLQAQHAVRPIFVGMTAGLVIKFILNIILI
                     RLSGIIGASISTVVSLIIFGTIIHIAVTRKYHLYAMRRFFINVVLGMVFMSIVVQCVL
                     NIVTTHGRITGLIELLCAAVLGIIALFFYIFRFNVLTYKELTYLPFGSKLYQIKKGRR
                     "
     gene            5654..6847
                     /locus_tag="O7798_001551"
     CDS             5654..6847
                     /locus_tag="O7798_001551"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499057.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleotide pyrophosphohydrolase"
                     /protein_id="HDC2863813.1"
                     /translation="MAHTITIVGLGNYGIDDLPLGIYKFLKTQDKVYARTLDHPVIES
                     LQDELTFQSFDHVYEAHNQFEDVYIDIVAQLVEAANEKDIVYAVPGHPRVAETTTVKL
                     LALAKDNTDIDVKVLGGKSFIDDVFEAVNVDPNDGFTLLDATSLQEVTLNVRTHTLIT
                     QVYSAMVAANLKITLMERYPDDYPVQIVTGARSDGADNVVTCPLYELDHDENAFNNLT
                     SVFVPKIITSTYLYHDFDFATEVIDTLVDEDKGCPWDKVQTHETLKRYLLEETFELFE
                     AIDNEDDWHMIEELGDILLQVLLHTSIGKKEGYIDIKEVITSLNAKMIRRHPHIFGDA
                     NAETIDDLKEIWSKAKDAEGKQPRVKFEKVFAEHFLNLYEKTKDKSFDEAALKQWLEK
                     GESNT"
     gene            6844..7107
                     /locus_tag="O7798_001552"
     CDS             6844..7107
                     /locus_tag="O7798_001552"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499058.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA-binding S4 domain-containing protein"
                     /protein_id="HDC2863814.1"
                     /translation="MRLDKYLKVSRLIKRRTLAKEVSDQGRITINGNVAKAGSDVKVE
                     DVLTIRFGQKLVTVKVTALNEHASKDNAKGMYEIIEERRLEEA"
     gene            7125..7517
                     /locus_tag="O7798_001553"
     CDS             7125..7517
                     /locus_tag="O7798_001553"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499059.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="septum formation initiator family protein"
                     /protein_id="HDC2863815.1"
                     /translation="MKNKVEHIENQYTSQENKKKQRQKMKMRVVRRRITVFAGVLLAI
                     IVVLSILLVVQKHRNDIDAQERKAKETQFQKQQNEEIALKEKLNNLNDKDYIEKIARD
                     DYYLSNKGEVIFRLPEDKDSSSSKSSKK"
     gene            7622..8023
                     /locus_tag="O7798_001554"
     CDS             7622..8023
                     /locus_tag="O7798_001554"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499060.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA-binding protein S1"
                     /protein_id="HDC2863816.1"
                     /translation="MSIEVGNKLKGKVTGIKKFGAFVELPEGKSGLVHISEVADNYVE
                     NVEEHLSVGDEVDVKVLSIADDGKISLSIKKAKDRPRRQHTSKPSHQKPVQKAEDFEK
                     KLSNFLKDSEDKLTSIKRQTESRRGGKGSRR"
     gene            8203..9498
                     /gene="tilS"
                     /locus_tag="O7798_001555"
     CDS             8203..9498
                     /gene="tilS"
                     /locus_tag="O7798_001555"
                     /EC_number="6.3.4.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499061.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA lysidine(34) synthetase TilS"
                     /protein_id="HDC2863817.1"
                     /translation="MQLNSNGWHVDDHIVVAVSTGIDSMCLLYQLLNDYKDSYRKLTC
                     LHVNHGVRSASIEEARFLEAYCERHHIDLHIKKLDLSHSLDRNNSIQNEARIKRYEWF
                     DEMMNVLEADVLLTAHHLDDQLETIMYRIFNGKSTRNKLGFDELSKRKGYRIYRPLLA
                     VSKKEIKQFQERYHIPYFEDESNKDNKYVRNDIRNRIIPAIDENNQLKVSHLLKLKQW
                     HDEQYDILQYSAKQFIQEFVKFDEQSKYLEVSRQAFNNLPNSLKMVVLDCLLSKYYEL
                     FNISAKTYEEWFKQFSSKKAQFSINLTDKWIIQIAYGKLIIMAKNNGDTYFRVQTIKK
                     PGNYIFNKYRLEIHSNLPKCLFPLTVRTRQSGDTFKLNGRDGYKKVNRLFIDCKVPQW
                     VRDQMPIVLDKQQRIIAVGDLYQQQTIKKWIIISKNGDE"
     gene            9503..10042
                     /gene="hpt"
                     /locus_tag="O7798_001556"
     CDS             9503..10042
                     /gene="hpt"
                     /locus_tag="O7798_001556"
                     /EC_number="2.4.2.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499062.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypoxanthine phosphoribosyltransferase"
                     /protein_id="HDC2863818.1"
                     /translation="MHNDLKEVLLTEEDIQNICKELGAQLTKDYQGKPLVCVGILKGS
                     AMFMSDLIKRIDTHLSIDFMDVSSYHGGTESTGEVQIIKDLGSSIENKDVLIIEDILE
                     TGTTLKSITELLQSRKVNSLEIVTLLDKPNRRKADIEAKYVGKKIPDEFVVGYGLDYR
                     ELYRNLPYIGTLKPEVYSN"
     gene            10299..12392
                     /gene="ftsH"
                     /locus_tag="O7798_001557"
     CDS             10299..12392
                     /gene="ftsH"
                     /locus_tag="O7798_001557"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499063.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent zinc metalloprotease FtsH"
                     /protein_id="HDC2863819.1"
                     /translation="MQKAFRNVLVIVIIGVIIFGLFSYLNGNGNMPKQLTYNQFTEKL
                     EKGDLKTLEIQPQQNVYMVSGKTKNDEDYSSTILYNNEKELQKITDAAKKQNGVKLTI
                     KEEEKQSVFVSILSTLIPVVVIALLFIFFLSQAQGGGSGGRMMNFGKSKAKMYDNNKR
                     RVRFSDVAGADEEKQELIEIVDFLKDNKKFKEMGSRIPKGVLLVGPPGTGKTLLARAV
                     AGEAGAPFFSISGSDFVEMFVGVGASRVRDLFDNAKKNAPCIIFIDEIDAVGRQRGAG
                     VGGGHDEREQTLNQLLVEMDGFGENEGIIMIAATNRPDILDPALLRPGRFDRQIQVGR
                     PDVKGREAILHVHAKNKPLDETVDLKAISQRTPGFSGADLENLLNEASLIAVREGKKK
                     IDMRDIEEATDRVIAGPAKKSRVISKKERNIVAHHEAGHTIIGMVLDEAEVVHKVTIV
                     PRGQAGGYAMMLPKQDRFLMTEQELLDKICGLLGGRVSEDINFNEVSTGASNDFERAT
                     QIARSMVTQYGMSKKLGPLQFGHSNGQVFLGKDMQGEPNYSSQIAYEIDKEVQRIVKE
                     QYERCKQILLEHKEQLILIAETLLTEETLVAEQIQSLFYEGKLPEIDYDAAKVVKDED
                     SEFNDGKFGKSYEEIRKEQLEDGQRDESEDRKEEKDIAEDKKEADKSDEKDEPAHRQA
                     PNIEKPYDPNHPDNK"
     gene            12621..13502
                     /gene="hslO"
                     /locus_tag="O7798_001558"
     CDS             12621..13502
                     /gene="hslO"
                     /locus_tag="O7798_001558"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499064.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Hsp33 family molecular chaperone HslO"
                     /protein_id="HDC2863820.1"
                     /translation="MTHDYIVKALAFDGEIRAYAALTTETVQEAQTRHYTWPTASAAM
                     GRTMTATAMMGAMLKGDQKLTVTVDGQGPIGRIIADANAKGEVRAYVDHPQTHFPLNE
                     QGKLDVRRAVGTNGSIMVVKDVGMKDYFSGASPIVSGELGEDFTYYYATSEQTPSSVG
                     LGVLVNPDNTIKAAGGFIIQVMPGAKDETISKLEKAISEMTPVSKLIEQGLTPEGLLN
                     EILGEDHVQILEKMPVQFECNCSHEKFLNAIKGLGEAEIQNMIKEDHGAEAVCHFCGN
                     KYKYTEEELNVLLESLA"
     gene            13681..14613
                     /gene="cysK"
                     /locus_tag="O7798_001559"
     CDS             13681..14613
                     /gene="cysK"
                     /locus_tag="O7798_001559"
                     /EC_number="2.5.1.47"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499065.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine synthase A"
                     /protein_id="HDC2863821.1"
                     /translation="MAQKPVDNITQIIGGTPVVKLRNVVDDNAADVYVKLEYQNPGGS
                     VKDRIALAMIEKAEREGKIKPGDTIVEPTSGNTGIGLAFVCAAKGYKAVFTMPETMSQ
                     ERRNLLKAYGAELVLTPGSEAMKGAIKKAKELKEEHGYFEPQQFENPANPEVHELTTG
                     PELLQQFEGKTIDAFLAGVGTGGTLSGVGKVLKKEYPNIEIVAIEPEASPVLSGGEPG
                     PHKLQGLGAGFIPGTLNTEIYDSIIKVGNDTAMEMSRRVAKEEGILAGISSGAAIYAA
                     IQKAKELGKGKTVVTVLPSNGERYLSTPLYSFDD"
BASE COUNT         5264 a         1978 c         2955 g         4450 t
ORIGIN      
        1 gaaaatggat gttgtcatta taataataaa tgaaacaatt atgttggagg taaacacgca
       61 tgaaatgtat tgtaggtcta ggtaatatag gtaaacgttt tgaacttaca agacataata
      121 tcggctttga agtcgttgat tatattttag agaaaaataa tttttcatta gataaacaaa
      181 agtttaaagg tgcatataca attgaacgaa tgaacggcga taaagtgtta tttatcgaac
      241 caatgacaat gatgaatttg tcaggtgaag cagttgcacc gattatggat tattacaatg
      301 ttaatccaga agatttaatt gtcttatatg atgatttaga tttagaacaa ggacaagttc
      361 gcttaagaca aaaaggaagt gcgggcggtc acaatggtat gaaatcaatt attaaaatgc
      421 ttggtacaga ccaatttaaa cgtattcgta ttggtgtggg aagaccaacg aatggtatga
      481 cggtacctga ttatgtttta caacgctttt caaatgatga aatggtaacg atggaaaaag
      541 ttatcgaaca cgcagcacgc gcaattgaaa agtttgttga aacatcacga tttgaccatg
      601 ttatgaatga atttaatggt gaagtgaaat aatgacaata ttgacaacgc ttataaaaga
      661 agataatcat tttcaagacc ttaatcaggt atttggacaa gcaaacacac tagtaactgg
      721 tctttccccg tcagctaaag tgacgatgat tgctgaaaaa tatgcacaaa gtaatcaaca
      781 gttattatta attaccaata atttatacca agcagataaa ttagaaacag atttacttca
      841 atttatagat gctgaagaat tgtataagta tcctgtgcaa gatattatga ccgaagagtt
      901 ttcaacacaa agccctcaac tgatgagtga acgtattaga actttaactg cgttagctca
      961 aggtaagaaa gggttattta tcgttccttt aaatggtttg aaaaagtggt taactcctgt
     1021 tgaaatgtgg caaaatcacc aaatgacatt gcgtgttggt gaggatatcg atgtggacca
     1081 atttcttaac aaattagtta atatggggta caaacgggaa tccgtggtat cgcatattgg
     1141 tgaattctca ttgcgaggag gtattatcga tatctttccg ctaattgggg aaccaatcag
     1201 aattgagcta tttgataccg aaattgattc tattcgggat tttgatgttg aaacgcagcg
     1261 ttccaaagat aatgttgaag aagtcgatat cacaactgca agtgattata tcattactga
     1321 agaagtgatc agccatctta aagaagagtt aaaaactgca tatgaaaata caagacccaa
     1381 aatagataaa tcagtgcgca atgatttgaa agaaacgtat gaaagcttta aattattcga
     1441 aagtacatac tttgatcatc aaatactacg tcgcttagta gcgtttatgt atgaaacacc
     1501 ttcgacaatt attgagtatt tccaaaaaga tgcaatcatt gcagttgatg aatttaatcg
     1561 tattaaagaa actgaagaaa gtttaacagt agagtctgat tcgtttatta gcaatattat
     1621 tgaaagtggt aatggattta taggacaaag ttttataaaa tatgatgatt ttgaaacatt
     1681 gattgaaggc tatcctgtca cttatttttc attattcgct acaacaatgc cgataaaact
     1741 aaatcatatt attaaatttt catgtaaacc tgtccaacaa ttttatgggc aatatgacat
     1801 tatgcgttct gaatttcaac gatatgttaa tcaaaactat catatcgtgg ttttggtcga
     1861 aaccgaaact aaagttgaac gtatgcaagc gatgttaagt gaaatgcata ttccatcaat
     1921 aacaaaattg catcgctcaa tgtcatcggg gcaagcagtg attattgaag gcagtttatc
     1981 tgaaggattt gaactacctg atatgggatt agttgtcatt actgagcgtg agctttttaa
     2041 atcaaaacag aaaaagcaac gaaaacgtac gaaagctatc tcaaatgctg aaaaaattaa
     2101 gtcttaccaa gatttaaatg tgggagatta tattgttcat gtgcatcatg gtgttggtag
     2161 atatttaggt gttgagacgc tcgaagtggg gcaaacgcat cgtgattata ttaaattgca
     2221 atataaaggt acggatcaac tatttgttcc agtagatcaa atggatcaag ttcaaaaata
     2281 tgtagcttcg gaagataaga cgccaaaatt aaataaactc ggtggcagtg aatggaaaaa
     2341 aacaaaagct aaagttcaac aaagtgttga agatattgct gaagagttga ttgatttata
     2401 taaagaaaga gaaatggcag aaggttatca atatggggaa gacacagctg agcaaacaac
     2461 atttgaatta gattttccat atgaacttac gcctgaccaa gctaaatcta tcgatgaaat
     2521 taaagatgac atgcaaaaat cgcgtccaat ggatcgcttg ctatgtggtg atgttggtta
     2581 tggtaaaact gaagttgcag tgagagcagc attcaaagct gtaatggaag gaaagcaggt
     2641 tgcattttta gttcctacaa ctattttagc tcagcaacat tatgagacgt taattgagcg
     2701 tatgcaagat tttcctgttg aaattcaatt aatgagtcgt tttagaacgc ctaaagagat
     2761 aaaacaaact aaggaaggac ttaaaactgg atttgttgac atagttgttg gtacacacaa
     2821 attacttagt aaagatatac agtataaaga tttagggctg ttgattgtag atgaagaaca
     2881 acgatttggt gtacgccata aagagcgtat taaaacatta aaacataatg tagatgtact
     2941 aacattgact gcaaccccaa tacctagaac attgcatatg agtatgctag gtgtgcggga
     3001 tttgtcagtg attgaaacgc cgccagaaaa tcgtttccca gttcaaacat atgtattaga
     3061 acagaacatg agttttatca aagaagcttt agaaagagaa ctatcccgtg atggccaagt
     3121 gttttatctt tataataaag tgcaatccat ttatgaaaaa cgagaacaac tccagatgtt
     3181 aatgccagat gctaacattg cagttgctca tggacaaatg acagagcgcg atttagaaga
     3241 aacgatgtta agttttatca ataatgaata tgatatttta gtaacgacga cgattattga
     3301 aacaggtgtc gatgtcccaa atgcaaatac tttgatcatt gaagatgcag atcgctttgg
     3361 attgagtcag ttgtatcaat taagaggtcg tgttggtcgt tcaagtcgta ttggttatgc
     3421 atacttctta catccagcaa ataaggtact aactgagact gcagaagatc gattacaagc
     3481 gattaaagaa tttacggagt taggctcagg atttaagatt gcgatgcgtg atttgaacat
     3541 tcgtggtgct ggtaatttgt taggtaaaca acagcacggc tttattgata cagttggatt
     3601 tgatttgtac agtcaaatgt tagaagaagc tgtaaatgaa aaacgtggta ttaaggaacc
     3661 agaatctgag gtgccagaag tcgaagttga tttaaacttg gatgcatatt tgccaacaga
     3721 atatattgca aatgaacaag ctaaaattga aatttataaa aagctacgaa aaactgaaac
     3781 atttgatcaa attatcgaca ttaaagatga attaattgat cgtttcaatg attatcctgt
     3841 tgaagtagca cgtttgcttg atatagtgga aataaaagta cacgcattac attcaggtat
     3901 cacgttgatt aaagataaag ggaaaataat tgatattcat ttatctgtaa aagccactga
     3961 aaatattgat ggcgaagtgc tgttcaaagc aacacaacct ttaggtagaa caatgaaggt
     4021 tggtgttcaa aataatgcaa tgacaattac tttaacgaaa caaaatcaat ggcttgatag
     4081 tttgaagttt ttagttaagt gcattgaaga aagtatgaga atcagtgatg aagcataaag
     4141 aagcatttaa tggcgttgtc gtgttaactg ctgcattaat tgtcattaaa attctgagtg
     4201 ctgtatatcg aattccatat caaaatatat taggcgatac aggtttgtat gcatatcaac
     4261 aagtgtatcc aattgtagca ttaggaatga tattatcgat gaatgccatt cctagtgcaa
     4321 ttacacaaaa tatagggaag tatcatagtg acgaagcata tgcaaaagca gtcgcttata
     4381 tacaattagt tggtatatta ttatttattg ctatttttgt gtttgcgaac aatattgcac
     4441 atatgatggg tgatggccat ttaacaccaa tgattcaagc tgcaagttta agctttatat
     4501 ttataggtat gcttggcgtg ttaagaggtt attatcaatc tgcaaataat atgacagttc
     4561 cggctatttc ccaggttata gaacaagtta tacgagtagg tattatcatt gttactattg
     4621 ttatttttgt agacagaggt tggacgatat atgaagcggg aacaattgct attttagcat
     4681 caacgatagg ttttttaggt tcttcaattt atttagtagc gcaccgacct tttaagttta
     4741 aaatggtaaa taacactgca aagatcgttt ggaaacagtt cgcactttcg gttttgattt
     4801 tcgctatcag tcaattaatc gtaattttat ggcaagtgat tgatagtgtt actattatta
     4861 agtcacttca agcgatacgc gtgccattcg atgttgccat aactgaaaaa ggagtctatg
     4921 accgtggtgc atcatttatt cagatgggat tgattgtaac tacaacattt agttttgcgc
     4981 tcattcctct gttaagtgac gcaatcaaaa tgaataatca ggtacttatg aatcgttatg
     5041 caaatgcgtc attaaagatt acgattttaa taagtacagc agcgggaata ggattaatta
     5101 atttattgcc tttaatgaac ggtgtgtttt ttaagacgaa tgatttaacc ttaacgttaa
     5161 gtgtttatat gattacggtc atttgtgtat cgttaattat gatggatatg gcattattac
     5221 aagcgcaaca tgctgtgaga cctatttttg ttggtatgac ggcaggattg gttattaaat
     5281 ttatacttaa tatcattttg attcgtttaa gtggcattat tggtgcgagc attagtactg
     5341 ttgtatcatt aattatattc ggtacgatta tccatattgc tgtcacgaga aaataccact
     5401 tatatgcgat gagacgattt tttatcaatg ttgttttagg tatggtattt atgtcgattg
     5461 ttgttcaatg cgtgttaaac atagtgacaa cacacggtag aatcactgga ctcattgaat
     5521 tattatgtgc agcagtatta ggtatcattg cattgttttt ctatattttt agatttaatg
     5581 ttttgacata taaagagtta acttatttac catttggttc aaagttgtat caaattaaga
     5641 aaggaagacg ttgatggcac ataccattac gattgttggc ttaggaaact atggcattga
     5701 tgatttgccg ctagggatat ataaattttt aaagacacaa gataaagttt atgcaagaac
     5761 gttagatcat ccagttatag aatcattgca agatgaatta acatttcaga gttttgacca
     5821 tgtttatgaa gcacataacc aatttgaaga tgtctatatt gatattgtgg cgcaattggt
     5881 tgaagctgct aatgaaaaag atattgtcta tgcggttccg ggtcatccta gagttgctga
     5941 gacaactaca gtgaaattac tggctttagc aaaggacaat actgatatag atgtgaaagt
     6001 tttaggtggg aaaagcttta ttgatgatgt gtttgaagca gttaatgtag atccaaatga
     6061 tggcttcaca ctgttagatg cgacatcatt acaagaagta acacttaatg ttagaacgca
     6121 tacattgatt acgcaagttt atagtgcaat ggttgctgct aatttgaaaa tcactttaat
     6181 ggaacgatat cctgatgatt accctgttca aattgtcact ggtgcacgaa gcgatggtgc
     6241 ggataacgtt gtgacatgcc cattatatga attggatcat gatgaaaatg cattcaataa
     6301 tttgacgagt gtattcgtac caaaaatcat aacatcgaca tatttgtatc atgactttga
     6361 ttttgcaacg gaagtgattg atactttagt tgatgaagat aaaggttgtc catgggataa
     6421 agtgcaaacg catgaaacgc taaagcgtta tttacttgaa gaaacatttg aattgttcga
     6481 agctattgac aatgaagatg attggcatat gattgaagaa ctaggagata ttttattaca
     6541 agtgttattg catactagta ttggtaaaaa agaagggtat atcgacatta aagaagtgat
     6601 tacaagtctt aatgctaaaa tgattcgtag acacccacac atatttggtg atgccaatgc
     6661 tgaaactatc gatgacttaa aagaaatttg gtctaaggcg aaagatgctg aaggtaaaca
     6721 gccaagagtt aaatttgaaa aagtatttgc agagcatttt ttaaatttat atgagaagac
     6781 gaaggataag tcatttgatg aggccgcgtt aaagcagtgg ctagaaaaag gggagagtaa
     6841 tacatgagat tagataaata tttaaaagta tcacggttaa taaagcgacg tacgctagca
     6901 aaagaagtaa gtgatcaagg tagaattaca ataaatggta atgttgctaa agctggatcg
     6961 gatgttaaag ttgaagatgt gctgacgatt cgctttggtc aaaaattagt aacagttaaa
     7021 gtaactgcat taaatgaaca tgcatctaaa gataacgcga agggtatgta tgaaatcatt
     7081 gaagagcgtc gacttgaaga agcgtaaatt ggaggtgaca agcaatgaaa aataaagtag
     7141 aacatataga aaatcagtac acgtcgcaag agaacaagaa aaaacaacgt caaaaaatga
     7201 aaatgcgtgt tgttcgtagg cgtattacag tatttgcggg cgtattactt gcgataattg
     7261 ttgttttatc aatcttgctt gttgtccaaa aacatcgcaa tgatattgat gcacaggagc
     7321 gaaaagcgaa agaaacacag tttcaaaagc aacaaaatga agaaattgcg ttaaaagaaa
     7381 agttgaataa tctgaatgac aaagattaca ttgaaaaaat tgcgcgtgat gattattact
     7441 taagcaacaa aggtgaagtg atttttaggt tgccagaaga caaagattcg tctagctcaa
     7501 aatcttcgaa aaaataaatc caaattgatt caaaattatc cgagtataga cattgtgaaa
     7561 aaatccaaac aaggatataa taagggaaaa tcgaatcaaa tcgggaggat ttatttaaca
     7621 tatgtcaatc gaagttggaa ataagcttaa aggtaaagtc actggtatta aaaagtttgg
     7681 tgcattcgta gaattacctg aaggaaaaag tggtttagtt cacattagtg aagtcgcaga
     7741 taattatgtt gaaaacgtag aagagcacct ttctgttggt gatgaagtag acgtaaaagt
     7801 attatctatt gctgatgatg gaaaaattag tctttcaatt aagaaagcta aagaccgtcc
     7861 acgtagacaa catacgagta aaccaagtca tcaaaaacca gtgcaaaaag ccgaagattt
     7921 tgaaaagaaa ttaagcaatt tcttaaaaga tagtgaagat aaattaactt caatcaaacg
     7981 tcaaacagaa tctagacgcg gtggcaaagg ttcaagacgt taattaaaat aaataaagac
     8041 tgtttcgata aggaatatat ttagaatgat gcgtatcgaa taatcgattg cagcgttaga
     8101 caatctaaga ctgtttctta aataaggagc agtctctttt atttgtaatg atataactaa
     8161 gacttatacc atttttgaaa attgtaaaag tgaggtgatg ttatgcagtt aaatagtaat
     8221 ggttggcatg ttgatgacca tattgttgtc gctgtttcta caggtattga tagtatgtgt
     8281 ttattgtatc aactactaaa tgattataaa gatagttata gaaaactaac atgcttacat
     8341 gtcaatcatg gcgttaggtc agcttcaatt gaggaagcca gatttttaga agcatactgc
     8401 gaacgtcatc acatcgattt acatatcaaa aagttagatt tgtcgcatag tctcgaccga
     8461 aataacagca ttcagaatga agctcgaatt aaacgttacg aatggtttga tgaaatgatg
     8521 aatgtattag aagcggatgt attgctaacg gcgcatcatt tggacgatca attagaaact
     8581 attatgtatc gtatttttaa tgggaaatca acacgtaata aactaggatt tgatgagtta
     8641 tcgaagcgaa aaggttatcg gatttatcga ccacttttag ctgtctctaa aaaagaaata
     8701 aaacaattcc aagagagata tcatattcca tattttgaag atgaatctaa taaagataac
     8761 aaatatgtta gaaatgatat tcgtaataga attattccag ctattgatga aaataatcaa
     8821 cttaaagtat cgcatttatt aaaattaaaa caatggcatg atgaacaata tgatattttg
     8881 caatattcag ctaaacaatt tattcaagaa tttgtgaagt ttgatgaaca gtcaaaatat
     8941 ttagaggttt ctagacaagc ttttaataac ttaccaaact cattaaagat ggttgtgttg
     9001 gactgcctat tatcaaagta ttatgagttg tttaatatta gtgctaaaac atacgaagag
     9061 tggtttaaac aatttagtag taagaaagca caattcagta ttaatctcac ggataaatgg
     9121 ataattcaaa tcgcatatgg taaattaata ataatggcta aaaataatgg cgatacatat
     9181 tttagagttc aaacaattaa aaagccaggt aattatattt ttaacaaata tcgattagag
     9241 atacattcta atttaccaaa atgtttattt ccgcttacag tgagaacacg acaaagtggc
     9301 gatacattta aactgaatgg gcgcgatggt tataagaaag tgaatcgcct gtttatagat
     9361 tgtaaagtgc cacagtgggt tcgggatcaa atgccaatcg tattggataa acaacagcgc
     9421 attattgcgg taggagattt atatcaacaa caaacaataa aaaaatggat tataattagt
     9481 aaaaatggag atgaatagcg ttatgcataa tgatttgaaa gaagtattgt taactgaaga
     9541 agatattcaa aatatctgta aggaattggg agcacaatta acaaaggatt atcaaggtaa
     9601 accattagta tgcgtgggta tcttaaaagg ctcagcaatg tttatgtcag atttaattaa
     9661 acgaattgat acccatttat caattgattt catggatgtt tctagttatc acggaggcac
     9721 tgagtcaact ggtgaagttc aaatcattaa agatttaggt tcttctattg aaaataaaga
     9781 cgtattaatt attgaagata tcttagagac tggtactaca cttaagtcaa ttactgaatt
     9841 attacaatct agaaaagtta attcattaga aatagttact ttattagata aaccaaaccg
     9901 tcgtaaagcg gacattgaag ctaagtatgt aggtaaaaaa ataccagatg aatttgttgt
     9961 tggttacggt ttagattatc gtgaattata ccgaaactta ccatatatcg gtacgttaaa
    10021 acctgaagtg tattcaaatt aattttttaa tcaatttcag ttattattac tatgcgtttg
    10081 agaaataata gtgtagactc aaaaatatga aaaatgtatt tcatatatat ttaattttag
    10141 acaagacata tgtcttgaaa agttgaaaaa tatagagatt gataaaacta atacgggtgt
    10201 gaatgacatt gatgttaagc tcaattacta gcttataaaa catgtcatat gttacaattt
    10261 ttgttagttt tattatggga agtaggagga aatgacgcat gcagaaagct tttcgcaatg
    10321 tgctagttat cgtaataata ggcgttatta tttttggtct attttcatat ttaaacggta
    10381 atggaaatat gccgaaacag cttacatata atcaatttac tgagaagttg gaaaaaggtg
    10441 accttaaaac tttagaaatc caaccacaac aaaatgtcta tatggtaagt ggtaaaacga
    10501 aaaatgatga agactattca tcaactattt tatataacaa cgaaaaagaa ttacaaaaaa
    10561 ttactgatgc tgctaaaaag caaaacggtg taaaattaac gattaaagaa gaagaaaaac
    10621 aaagtgtctt tgtgagtata ctttcaacat taattccagt tgtagtcata gcgttattat
    10681 ttattttctt cctaagccaa gcacaaggtg gcggtagtgg cggtcgtatg atgaactttg
    10741 gtaaatctaa agcaaaaatg tacgataata ataaacgtcg tgttcgtttc tctgatgtag
    10801 caggggcaga tgaagaaaaa caagaattaa ttgaaattgt tgatttcttg aaagataata
    10861 aaaaattcaa agaaatggga tctaggattc ctaaaggtgt cttacttgtt ggacctccag
    10921 gtactggtaa aacattactt gctagagcgg ttgcaggtga agctggcgca ccattcttct
    10981 ctattagtgg ttcagacttt gtagagatgt ttgttggtgt tggtgcgagc cgtgttcgtg
    11041 acttattcga taatgctaag aaaaacgcgc cttgtatcat ctttatcgat gagattgatg
    11101 ctgttggtcg tcaacgtggt gcaggtgttg gtggcggtca tgatgaacgt gaacaaaccc
    11161 taaaccaatt attagttgaa atggatggtt tcggtgaaaa tgaaggtatc attatgatag
    11221 ctgctacaaa ccgtcctgat atccttgacc cagccttatt acgtccaggt cgttttgata
    11281 gacaaattca agttggtcgt ccagatgtga aaggccgtga agcaattctt catgttcatg
    11341 ctaaaaacaa accacttgat gaaacggttg atttaaaagc aatttcacaa cgtacacctg
    11401 gtttctcagg tgctgattta gagaacttat taaatgaagc atctttaatt gctgtacgtg
    11461 aaggtaaaaa gaaaattgac atgagagata tcgaagaggc aacggataga gttatagccg
    11521 gacctgctaa gaaatctcga gttatttcta agaaagaacg taatattgtt gctcatcacg
    11581 aagctggtca tacaattatc ggtatggtac ttgatgaggc agaagtagtg cataaagtta
    11641 ctattgttcc acgtggacaa gcaggtggtt atgcaatgat gctacctaaa caagatcgtt
    11701 tcttaatgac tgaacaagag ttattagata aaatctgtgg tttacttggt ggacgtgtat
    11761 cagaagatat taactttaac gaagtatcaa caggtgcttc aaatgacttc gaacgtgcaa
    11821 cacaaatcgc acgctcaatg gttacgcaat atggtatgag taaaaaatta ggaccattac
    11881 agttcggtca tagcaatggt caagtattct taggtaaaga tatgcaaggt gagcctaatt
    11941 attcaagcca aatcgcatat gaaattgata aagaagttca acgaatcgtt aaagaacaat
    12001 acgaacgttg taaacaaatt ttattagagc acaaagaaca attaatttta attgctgaaa
    12061 cattattaac agaagaaaca ttagttgctg aacaaattca atcattattc tacgaaggta
    12121 aattacctga aattgattat gatgcagcta aagttgttaa agatgaagat tctgaattta
    12181 atgatggtaa attcggtaaa tcttatgaag agattcgtaa agagcaatta gaagatggac
    12241 aacgtgacga aagtgaagat cgtaaagaag aaaaagatat tgctgaggat aaaaaagaag
    12301 ctgataaatc tgatgaaaaa gatgaaccag cacatcgaca agccccaaat atcgaaaaac
    12361 cttacgatcc aaatcaccca gacaataaat aatcgattat attcagtacc tctttctatg
    12421 ataaagttat agaaagaggt acttttatcg tttttgaaaa tacgtattag attttaagtc
    12481 gttgaattgt tatagcagaa aataattgta aaacaagtta cttcattatt tagaatgatg
    12541 ggtgtagaat aagtacaatt gttgcatttt atgaagtaaa gtaatttttt aaatatagag
    12601 taatagagga gattgaaata atgacacacg attatattgt taaagcatta gcatttgatg
    12661 gagagattag ggcttatgct gctttgacaa ctgaaactgt tcaagaagca caaacgagac
    12721 attatacatg gccgacagca tctgctgcaa tgggaagaac aatgacagca acagctatga
    12781 tgggcgcaat gttgaaaggt gatcaaaaat taactgtcac tgtagatggc caaggaccta
    12841 ttggacgaat tattgccgat gcaaatgcta aaggcgaggt gcgtgcttat gtagaccatc
    12901 cacaaactca ttttccatta aatgagcaag gtaaacttga tgtaagacga gcggtaggga
    12961 caaatggatc tattatggtt gttaaagacg ttggaatgaa agactatttc tctggagcaa
    13021 gtccaattgt ttcaggagaa cttggtgaag attttactta ttattatgct acaagtgaac
    13081 aaacaccttc atcggtaggt cttggtgtat tggtaaatcc tgataatacg attaaagcag
    13141 caggaggatt tatcattcaa gttatgccag gtgccaaaga tgaaacaatt tcaaaattag
    13201 aaaaagcaat tagtgaaatg acaccagttt ctaaattaat tgaacaagga ttaacgccag
    13261 aaggattact aaacgaaatc ttaggtgaag accatgtgca aattttagag aaaatgcctg
    13321 ttcaatttga atgtaattgt agtcatgaga aatttttaaa tgctattaaa ggattgggcg
    13381 aggctgagat tcaaaatatg attaaagaag atcatggtgc tgaagcagta tgtcatttct
    13441 gtggaaataa atataaatat actgaagaag aattaaacgt gttgctagaa agtttagcgt
    13501 aatttaattt aaatcaatac gctaaaatgt ttatttttag cggtttagtg aaatgtagaa
    13561 ctaaatagtt gtataatcct tagtgatttt gtttgctttc tagaatttat ttgataaaat
    13621 aattctatat ccgataaata aactaagatt tcaacaacta actaaaaagg agtgttctta
    13681 atggcacaaa aaccagtaga taatattact caaattattg gcggtacacc ggtagtcaaa
    13741 ttgagaaatg tagtagatga caatgcagca gatgtttatg taaaattgga atatcaaaat
    13801 ccaggtggtt ctgtaaagga tagaattgct ttagcaatga ttgaaaaagc agagcgagaa
    13861 ggcaaaatta aacctggcga tacaattgta gaaccaacaa gtggtaatac aggtatcggt
    13921 ttagcatttg tatgtgctgc taaaggatat aaagcagtat ttactatgcc cgaaacaatg
    13981 agccaagagc gtcgtaattt attaaaagca tacggtgcgg aattagtttt aacgcctgga
    14041 tcagaagcga tgaaaggtgc aattaaaaaa gctaaagaat tgaaagaaga acatggttac
    14101 ttcgagccac aacaatttga aaaccctgcg aaccctgaag ttcatgagtt aactacaggt
    14161 cctgagttat tacaacaatt tgaagggaaa actatcgatg cgttcctagc tggtgttggt
    14221 actggtggta cgttatctgg tgtaggtaaa gttctgaaaa aagaatatcc taacatcgaa
    14281 attgttgcta tagagcctga ggcttctcca gtattgagcg gtggtgagcc aggtccacat
    14341 aaattacaag gtttaggtgc tggatttatt ccaggcactt tgaatacaga aatctatgac
    14401 agtattatta aagtaggaaa tgatacagcg atggaaatgt ctcgtcgagt tgctaaagag
    14461 gaaggtattt tagcaggtat ttcatcaggt gctgcgattt atgctgccat tcaaaaagca
    14521 aaagaattag gaaaaggtaa aacagtagta acagtattgc cgagtaatgg tgaacgctac
    14581 ttatcaacac ctttatattc attcgatgac taattaatgt catttaaaag agtgagttat
    14641 ctttttg
//
LOCUS       DALPQQ010000063        14422 bp    DNA     linear   BCT 22-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus strain K18-6-464
            SAMD00233528-rid16434743.denovo.063, whole genome shotgun sequence.
ACCESSION   DALPQQ010000063 DALPQQ010000000
VERSION     DALPQQ010000063.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMD00233528
            Sequence Read Archive: DRR236061
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 14422)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 14422)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001543423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001543423.1
            Genome Coverage       :: 77x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/22/2022 17:09:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,811
            CDSs (total)                      :: 2,743
            Genes (coding)                    :: 2,689
            CDSs (with protein)               :: 2,689
            Genes (RNA)                       :: 68
            rRNAs                             :: 2, 4, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 4, 2 (16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 54
            CDSs (without protein)            :: 54
            Pseudo Genes (ambiguous residues) :: 0 of 54
            Pseudo Genes (frameshifted)       :: 27 of 54
            Pseudo Genes (incomplete)         :: 27 of 54
            Pseudo Genes (internal stop)      :: 10 of 54
            Pseudo Genes (multiple problems)  :: 10 of 54
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..14422
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMD00233528-rid16434743.denovo.063"
                     /strain="K18-6-464"
                     /db_xref="taxon:1280"
                     /geo_loc_name="Japan: Niigata"
     gene            124..1629
                     /locus_tag="O7798_001560"
     CDS             124..1629
                     /locus_tag="O7798_001560"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499298.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide MFS transporter"
                     /protein_id="HDC2863822.1"
                     /translation="MTQQNSHGNQIQDIPQTGFFGHPRGLGVLFFVEFWERFSYYGMR
                     ALLIFYMYFAVTDNGLGIDKTTAMSIMSVYGSLIYMTSIPGGWIADRITGTRGATLLG
                     AVFIIIGHICLSLPFALIGLFTSMFFIIIGSGLMKPNISNIVGRLYPENDRRMDAGFV
                     IFYMSVNMGALLSPIILQHFVNVKNFHGGFLIAAVGMALGLVWYVLFNRKNLGSVGMK
                     PTNPLTPAEKKKYGLIIGSVVLAIVLIIVIGALTNSLSFNLVSNTVLVLGIALPIIYF
                     TLIIRSKDVTDTERSRVKAFIPLFILGMVFWAIQEQGSNVLNIYGIEHSDMKLNLFGW
                     KTNFGEAIFQSINPLFILLLAPIISLLWQKLGTKQPSLPVKFAIGTFLAGASYILIGI
                     VGYASGSSNFSVNWVILSYIICVIGELCLSPTGNSAAVKLAPKAFNAQMMSIWYLTNA
                     SAQAINGTLVKLIEPLGQTNYFIFLGVVAIIVTTIVLAFSPLIIKAMKGIR"
     gene            complement(1707..1808)
                     /locus_tag="O7798_001561"
     CDS             complement(1707..1808)
                     /locus_tag="O7798_001561"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499297.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDC2863823.1"
                     /translation="MVINEIDFYRVGRENIVIAVYNEHIKFLFILIS"
     gene            1899..2816
                     /locus_tag="O7798_001562"
     CDS             1899..2816
                     /locus_tag="O7798_001562"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499296.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="diacylglycerol kinase family lipid kinase"
                     /protein_id="HDC2863824.1"
                     /translation="MENKYTHGVLFYHEHSGLKNINQGIGEVTTALSSICKHLSIQLS
                     ENEGDIIKYCQEIKTKNYAKDVDILFILGGDGTVNELINGVMTHDLQLPIGILPGGTF
                     NDFTKTLNIAPNHKQASEQMISAQVGTYDVIKINNQYALNFVGLGLIVQNAENVQDGS
                     KDIFGKLSYIGSTVKTLLNPTQFNYQLSIDDKTYSGETTMILTANGPFIGGSRIPLTD
                     LSPQDGELNTFIFNEQSFSILNDIFKKRDSMNWNEITQGIEHIPGKKISLTTDPAMKV
                     DIDGEISLETPIDIEVIPNAIQLLTVNDL"
     gene            complement(3439..3981)
                     /locus_tag="O7798_001563"
     CDS             complement(3439..3981)
                     /locus_tag="O7798_001563"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499294.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5'(3')-deoxyribonucleotidase"
                     /protein_id="HDC2863825.1"
                     /translation="MTRKSIAIDMDEVLADTLGEIIDAVNFRADLGIKMEALNGQKLK
                     HVIPEHDGLITEVLREPGFFRHLKVMPYAQEVVKKLTEHYDVYIATAAMDVPTSFSDK
                     YEWLLEFFPFLDPQHFVFCGRKNIVKADYLIDDNPRQLEIFTGTPIMFTAVHNINDDR
                     FERVNSWKDVEQYFLDNIEK"
     gene            complement(4332..5390)
                     /gene="hisC"
                     /locus_tag="O7798_001564"
     CDS             complement(4332..5390)
                     /gene="hisC"
                     /locus_tag="O7798_001564"
                     /EC_number="2.6.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499293.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidinol-phosphate transaminase"
                     /protein_id="HDC2863826.1"
                     /translation="MKEQLNQLSAYQPGLSPRALKEKYGIEGDLYKLASNENLYGPSP
                     KVKEAISAHLDELYYYPETGSPTLKAAISKHLNVDQSRILFGAGLDEVILMISRAVLT
                     PGDTIVTSEATFGQYYHNAIVESANVIQVPLKDGGFDLEGILKEVNEDMSLVWLCNPN
                     NPTGTYFNHESLDSFLSQVPPHVPVIIDEAYFEFVTAEDYPDTLALQQKYDNAFLLRT
                     FSKAYGLAGLRVGYVVASEHAIEKWNIIRPPFNVTRISEYAAVAALEDQQYLKEVTHK
                     NSVERERFYQLPQSEYFLPSQTNFIFVKTKRVNELYEALLNVGCITRPFPTGVRITIG
                     FKEQNDKMLEVLSNFKYE"
     gene            complement(5630..7144)
                     /locus_tag="O7798_001565"
     CDS             complement(5630..7144)
                     /locus_tag="O7798_001565"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499292.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease/substrate-binding
                     protein"
                     /protein_id="HDC2863827.1"
                     /translation="MTNFFDILSERKGQLFSTMIEHIQISFIALLIATAIAVPLGILL
                     TKTKTISEIVMNIAAILQTIPSLALLGLMIPLFGIGRVPAIIALVVYALLPILRNTYT
                     GIKEVDPSLIEAAKGIGMKPFRRLTKVELPIAMPVIMAGVRTAMVLIIGTATLAALIG
                     AGGLGDLILLGIDRNNASLILLGAIPAALLAIIFDLILRFMAKLSYKKLLMTLGVIVM
                     IIILAIAIPMFAQKGDKITLAGKLGSEPSIITNMYKILIEEETKNTVEVKDGMGKTAF
                     LFNALKSDDIDGYLEFTGTVLGELTKEPLKSKEEKKVYEQAKQSLEKKYQMTMLKPMK
                     YNNTYALAVKRDFAKQHNIRTIGDLNKVKDQLKPGFTLEFNDRPDGYKAVQKAYNLNL
                     DNIRTMEPKLRYQAINKGNINLIDAYSTDAELKQYDMVVLKDDKHVFPPYQGAPLFKE
                     SFLKKHPEIKKPLNKLENKISDEDMQMMNYKVTVKNEDPYTVAKDYLKAKGLIK"
     gene            complement(7137..8114)
                     /locus_tag="O7798_001566"
     CDS             complement(7137..8114)
                     /locus_tag="O7798_001566"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499291.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HDC2863828.1"
                     /translation="MIKFKNVTKRYGKHVAVDNISFNINEGEFFVLIGPSGCGKTTTL
                     KMINRLIHLSEGYIYFKDKPISDYPVYEMRWDIGYVLQQIALFPHMTIKENIAQVPQM
                     KKWKEKDIDKRVDELLEMVGLEPEKYKNRKPDELSGGQRQRVGVIRALAADPPVILMD
                     EPFSALDPISREKLQDDLIELQTKIKKTIIFVTHDIQEAMKLGDKICLLNEGHIEQID
                     TPEGFKNNPQSEFVKQFMGSHLEDDAPCVEENAIIRDLDIMKPIDEVTSMSAYPIVYD
                     NQPIEVLYQLLSESERVIVMQEDSVGQYVIDRKDIFKYLSQKKEVAQHD"
     gene            complement(8336..10117)
                     /gene="recQ"
                     /locus_tag="O7798_001567"
     CDS             complement(8336..10117)
                     /gene="recQ"
                     /locus_tag="O7798_001567"
                     /EC_number="3.6.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499290.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA helicase RecQ"
                     /protein_id="HDC2863829.1"
                     /translation="MMQQTLSHYFGYETFRPGQEEIISKVLDHRNVLGVLPTGGGKSI
                     CYQVPGLLLGGTTIVISPLISLMKDQVDQLKAMGIQAAFLNSSLTQKEQQRIEKALSN
                     GEIQFLYVAPERFENRYFLNMLQRIKIHLVAFDEAHCISKWGHDFRPSYQNVISKVFT
                     LPQDFTIIALTATATVEVQQDIREKLNIAQTDQIKTSTKRRNLIFKVNPTYQRQKFIL
                     DYIKTHDEDAGIIYCSTRKQVEELQEALESQKIESVIYHAGLSNKEREEAQNDFLFDR
                     VKVVVATNAFGMGIDKSNVRFVIHYNMPGDLESYYQEAGRAGRDGLKSECILLFSERD
                     INLHEYFITVSQADDDYKDKMGEKLTKMIQYTKTKKCLEATIVHYFEPNEKLEECEQC
                     SNCVQQDKSYNMTQEAKMIISCIARMKQQESYSVIIQVLRGESTDYIKYKGYDQISTH
                     GLMKGYTTSELSHLIDELRFKGFLNENDEILMCDTSIKKLLSNEVEVFTTPFKQKATE
                     KVFINTVEGVDRVLFSQLVEVRKKLSDKLTIAPVSIFSDYTLEEFAKRKPASKQDMIN
                     IDGVGSYKLKHYCPAFLETIQNYKAKV"
     gene            complement(10129..12012)
                     /locus_tag="O7798_001568"
     CDS             complement(10129..12012)
                     /locus_tag="O7798_001568"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499289.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC-F family ATP-binding cassette
                     domain-containing protein"
                     /protein_id="HDC2863830.1"
                     /translation="MGMEAYKIEHLNKSYADKTIFDNLDLSISEGEKIGLVGINGTGK
                     STLLKVIGGIDDDFTANVMHPNQYRIRYSSQKQDLNEDMTVFDAVLSSDTTTLRIIKQ
                     YEQAVQAYADDQSDKLFKRMMDAQDAMDQHDAWDYNAEIKTILSKLGIHDTTKYIKEL
                     SGGQQKRVVLAKTLIEQPDLLLLDEPTNHLDFESISWLINYVKQYPHTVLFVTHDRYF
                     LNEVSTRIIELNRGKLASYPGNYESYIEMRAEREVTLQKQQQKQRALYKEELAWMRAG
                     AKARTTKQQARINRFNDLENEVNQQYKDDKGELNLAYSRLGKQVFELEDLSKAINDKV
                     LFEHLTEIIQKGERIGVVGPNGAGKTTLLNILSGEDQQFEGKLKTGQTVKVAYFKQTD
                     ETLDRDIRMIDYLREESEIAKEKDGTSVSITQLLERFLFPSATHGKKVYKLSGGEQKR
                     LYLLRLLVHQPNVLLLDEPTNDLDTETLTILEDYIHTFGGTVITVSHDRYFLNKVAQS
                     YWFIHDGQMEKIIGTFEDYESYKKSLDKNKSTLKQQSKSSTTVRKKNGLSYKEKLEYE
                     QLMKRIEQAEVRMEEIDVLMIEASADYGKIKELNEEKEQLEIQYDLDITRWSELEEIK
                     EQQ"
     gene            complement(12283..14223)
                     /gene="ltaS"
                     /locus_tag="O7798_001569"
     CDS             complement(12283..14223)
                     /gene="ltaS"
                     /locus_tag="O7798_001569"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499287.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polyglycerol-phosphate lipoteichoic acid
                     synthase LtaS"
                     /protein_id="HDC2863831.1"
                     /translation="MSSQKKKISLFAFFLLTVITITLKTYFSYYVDFSLGVKGLVQNL
                     ILLMNPYSLVALVLSVFLFFKGKKAFWFMFIGGFLLTFLLYANVVYFRFFSDFLTFST
                     LNQVGNVESMGGAVSASFKWYDFVYFIDTLVYLFILIFKTKWLDTKAFSKKFVPVVMA
                     ASVALFFLNLAFAETDRPELLTRTFDHKYLVKYLGPYNFTVYDGVKTIENNQQKALAS
                     EDDLTKVLNYTKQRQTEPNPEYYGVAKKKNIIKIHLESFQTFLINKKVNGKEVTPFLN
                     KLSSGKEQFTYFPNFFHQTGQGKTSDSEFTMDNSLYGLPQGSAFSLKGDNTYQSLPAI
                     LDQKQGYKSDVMHGDYKTFWNRDQVYKHFGIDKFYDATYYDMSDKNVVNLGLKDKIFF
                     KDSANYQAKMKSPFYSHLITLTNHYPFTLDEKDATIEKSNTGDATVDGYIQTARYLDE
                     ALEEYINDLKKKGLYDNSVIMIYGDHYGISENHNNAMEKLLGEKITPAKFTDLNRTGF
                     WIKIPGKSGGINNEYAGQVDVMPTILHLAGIDTKNYLMFGTDLFSKGHNQVVPFRNGD
                     FITKDYKYVNGKIYSNKNNELITTQPADFEKNKKQVEKDLEMSDNVLNGDLFRFYKNP
                     DFKKVNPSKYKYETGPKANSKK"
BASE COUNT         4528 a         2548 c         2071 g         5275 t
ORIGIN      
        1 cttaataaca gaatattctc aatattttta tttttttgtg atttgttgga atatttagtt
       61 gataaggcac aatcaaattt acttaaacta ttgtattagg ggaagaaagg atgggatgta
      121 tacatgacac aacaaaactc ccatggaaat caaattcaag acatacctca aacaggattt
      181 ttcgggcatc ctcgaggact aggcgtactc ttctttgtag agttctggga aaggtttagt
      241 tattatggca tgcgtgccct actcattttc tacatgtact ttgccgtaac agataatggc
      301 cttggaattg ataaaacaac agctatgtca attatgtcag tttatggttc attaatctat
      361 atgacatcaa taccaggcgg atggattgct gacagaatta caggcactag aggcgctact
      421 ttattaggtg cagtctttat tattatcgga catatttgtt taagcttacc atttgcatta
      481 atcggcttat tcacatcaat gttcttcatc attattggtt caggtttaat gaagccaaac
      541 atttcaaata tcgttggccg tttatatcct gaaaatgata gacgtatgga tgcaggtttt
      601 gttattttct atatgtcagt taatatgggt gcattattat cacctattat tttgcaacac
      661 tttgttaatg ttaaaaactt ccacggcgga ttcttgattg cagcagttgg tatggcatta
      721 ggtttagtat ggtatgtact tttcaaccgc aaaaacttag gtagcgttgg tatgaaacct
      781 actaacccat tgacaccagc tgaaaagaaa aagtatggtc ttattatcgg aagtgttgtt
      841 ttagcaattg tattaattat cgttattggt gcattaacta actcattatc atttaactta
      901 gttagtaata ctgttttagt attaggtatt gcattaccaa tcatttactt cactttaatt
      961 attagaagta aagatgtcac tgatactgaa cgttctcgtg ttaaagcatt tattccatta
     1021 tttattcttg gaatggtgtt ctgggctatt caagaacaag ggtctaatgt attaaacata
     1081 tatggaattg aacattcaga tatgaaatta aacttatttg gttggaaaac aaactttggt
     1141 gaagcgatct tccaatcaat taacccatta tttattttat tactagctcc aattatttca
     1201 cttttatggc aaaagcttgg aactaaacaa cctagcctgc cagtaaaatt tgcaattggt
     1261 acgttcttag caggtgcgtc atacatacta attggtattg taggttatgc atcaggttca
     1321 tcaaactttt cagttaactg ggttatttta tcgtacatta tttgtgttat cggtgagcta
     1381 tgcttatcac caacgggtaa tagtgctgct gttaagttag cacctaaagc atttaatgcc
     1441 caaatgatga gtatttggta cttaactaac gcttctgcac aagcaatcaa tggtacttta
     1501 gttaagttaa tagaaccact aggtcaaaca aattacttta ttttcctagg tgttgttgca
     1561 attattgtta caacaattgt attagcattc tcacctttaa tcatcaaagc gatgaaaggt
     1621 atacgttaat attgttggcc taattcaaaa aacagtaagt catttaaatg gcttactgtt
     1681 tttttatagg tttctattaa ttaaattcaa gatatcagta taaataaaaa cttaatatgc
     1741 tcattataga cagctataac tatattttct cgtcccactc tatagaaatc aatttcattt
     1801 attaccattt tctctattta aaaacatatt tttggtatta acaattaaaa gtgggtatat
     1861 atatttaatg aaccaatttt tagaaagtag gctaaactat ggaaaataaa tatacacatg
     1921 gtgtcctctt ttaccatgaa cacagtggat taaaaaatat taatcaaggt attggggaag
     1981 ttacaacagc attaagttca atttgtaagc atctttctat tcaattgagt gaaaacgaag
     2041 gtgacattat taaatattgc caagaaatca aaactaaaaa ctatgcaaaa gatgtagata
     2101 tattatttat tcttggcggt gatggcacgg ttaacgaact tataaacggt gttatgacac
     2161 atgaccttca actccctatt ggcattttac caggcggtac ttttaatgat tttacaaaaa
     2221 cgctaaatat agcacctaat cataaacaag ctagtgaaca aatgatttct gcacaagttg
     2281 gtacatacga tgtaattaaa ataaataatc aatatgcact caactttgtt ggcttaggtc
     2341 tcattgttca aaacgctgaa aacgtacaag atggttcaaa agatatattt ggtaaattga
     2401 gttatattgg atcaactgtc aaaacactgc taaatccaac acaatttaat tatcaattat
     2461 caatagatga taagacatat tctggcgaaa cgaccatgat actaacagca aatggtccat
     2521 tcattggtgg tagtcgtata ccattgactg atttgtctcc tcaagatggt gaactgaaca
     2581 ctttcatttt taatgaacaa agtttcagta ttttaaatga tatttttaaa aagcgtgata
     2641 gcatgaattg gaatgaaatt actcaaggta ttgagcatat acctggtaaa aagatttcac
     2701 ttacaacaga tccagcaatg aaagttgata ttgatggcga aatttcatta gaaacaccta
     2761 ttgatattga ggttatacca aatgccattc agttacttac tgtcaatgat ttgtaagcat
     2821 ccggaatgat cttaacccga tattatatta ggtttggagt gtaatcataa gattcaacgc
     2881 accttatatt cgtttttatt agctttaagc tattaccctg tttcaaaaac agacatataa
     2941 ttttggcgca tgccactaaa atgattgatg ttgtatttta aatcatagtg gtttatgcgt
     3001 ctttttcaaa ttctataaaa aatcggatga cgtgtaatct gccatagatt aacacattca
     3061 tccgatttat aataataaga tagactaaca tttattgaga gcgggacgga aatgataaag
     3121 aacgactaat gattgattat gtagcgattc tttatcatta gtcacagcta atgtgtactt
     3181 aaaaatatga atgcatgagt tacactcatg cataagaaat actaatttct aaagaaaaag
     3241 tatttcttta tgttggggcc ccgccaactt gcattgtctg tagaaattgg gaatccaatt
     3301 tctctatgtt ggggccccgc agtcaactac tgccaatata gtgttgtagt gtctaagaca
     3361 taaaagttca tctcagtcac aattacttta tagcctatcc atcatctttt ctacatgaaa
     3421 tttttcaagt gatatatttt atttctcaat attatctaaa aaatactgtt ctacatcttt
     3481 ccagctattt acgcgttcaa atcgatcatc attaatatta tgcactgctg taaacataat
     3541 cggtgtacca gtaaaaattt caagctgtct aggattgtca tctattaaat aatcagcttt
     3601 aacgatgttt tttctaccac aaaaaacaaa atgctgagga tctaaaaatg gaaagaactc
     3661 tagtaaccat tcatatttat cactaaatga tgttggtaca tccattgctg ctgtagcaat
     3721 atatacatca taatgttcag ttaatttttt cacaacttct tgtgcatacg gcatcacttt
     3781 aagatgtctg aagaagcctg gttctctcaa tacttctgta attaatccat catgttcagg
     3841 aataacatgt ttaagttttt gaccattcaa agcttccatt ttaataccta aatccgctct
     3901 aaaattgaca gcatcaatga tttctcctaa tgtatctgcc aatacttcat ccatatcaat
     3961 cgcgattgat ttacgggtca ttttaatctt ctcctcaaaa tatcagtatt gattcagtat
     4021 aacaaaaaag caattgatac aaaacaatat catctattgt tgctttttac actgaatact
     4081 ctcacctcat cattcacact gcattgagct tgagacataa atcaatgttc aatgctctac
     4141 aaagttatat tggcagtagt tgactgaacg aaaatgcgct tgtaacaagc ttttttcaat
     4201 tctagtcaac cttgccggcg gggccccaac aaagagaaat tggattccca atttctacag
     4261 acaatgcaag ttggggtggg acgacgaaat aaattttgcg aaaatatcat ttctgtccca
     4321 ctccccactt actattcgta tttaaagttt gataaaactt ctaacatttt atcattttgt
     4381 tctttaaaac caattgtaat tctaacacca gttggaaatg gtcgcgtaat acaccctaca
     4441 tttaaaagtg cttcataaag ttcatttacc cgctttgttt ttacaaatat aaaattcgtt
     4501 tgacttggca agaaatactc actttgaggt aattgataaa atctttcgcg ttcaacacta
     4561 tttttatgtg ttacctcttt taaatattgt tgatcttcaa gtgctgcaac tgctgcgtat
     4621 tcagatatac gtgtcacatt aaatggtggt ctaatgatgt tccatttttc aatcgcatgt
     4681 tcacttgcta ccacatatcc tacacgtaaa cccgctaatc catacgcctt tgaaaatgta
     4741 cgtaataaga aagcattgtc atatttttgt tgcaaagcaa gtgtatccgg gtagtcctct
     4801 gctgtcacaa attcaaaata agcttcatct ataattactg gtacatgtgg aggtacttga
     4861 gataaaaacg aatctaagct ctcatgatta aaatatgtac ctgtaggatt atttggatta
     4921 cataaccata ccaatgacat atcttcatta acttctttta aaataccttc taaatcgaag
     4981 ccaccatctt ttaaaggtac ttgtatcaca ttagctgatt caacaatcgc attgtgataa
     5041 tattgaccga atgtcgcttc acttgtaaca atagtatccc ctggcgttaa tacagctcta
     5101 gaaatcatta atataacttc atctaatccc gcaccaaata aaatgcgtga ttgatctaca
     5161 tttaaatgtt tactaatcgc cgcttttaat gtcggtgatc ctgtttcagg ataataatat
     5221 aactcatcta agtgtgctga tatcgcttct ttaactttag gcgatggtcc atacaaattt
     5281 tcatttgatg caagtttata taaatctcct tcaatgccat acttttcttt caatgccctt
     5341 ggagataaac caggctgata tgctgatagt tgattaagtt gttctttcat aataaaaaca
     5401 acctccttag aattaactga aatttcaaaa aacttatatt cattatatcg ctctatgttt
     5461 ctaaaatgca atgctactat tttcacatca taatagctta cattgtgttt aacatgtcat
     5521 attttttaat cattattgca tgtttaaatt gaacataatt atagatttaa atataacaac
     5581 gccacataag atataatttg gtgttacgca tcttatgtgg cgttggtcgt tatttgatta
     5641 acccttttgc ttttaaataa tctttcgcaa ctgtatatgg gtcttcattt ttaactgtta
     5701 ctttatagtt catcatttgc atatcttcat cagatatttt gttttctagt ttgtttaacg
     5761 gtttcttaat ttctggatgt ttctttaaaa agctttcttt aaataatggt gctccttgat
     5821 atggtggaaa tacgtgctta tcatctttta acacaaccat atcatattgt tttaattcag
     5881 cgtcagttga atatgcatct attaaattaa tattaccttt attgatcgct tgatatctca
     5941 acttaggttc cattgtacgt atgttatcta aatttaaatt ataagccttt tgaacagctt
     6001 tgtaaccatc tggacgatca ttaaattcca atgtaaatcc tggtttaagt tgatctttaa
     6061 ccttatttaa atcaccaatt gtacgtatat tatgttgttt agcaaaatca cgttttacag
     6121 ctaaagcata cgtattgtta tacttcattg gttttaacat agtcatttga tatttctttt
     6181 caagactttg cttagcttgt tcataaactt ttttctcttc ttttgacttc aatggttctt
     6241 ttgttaattc acctaaaact gttccagtaa attctaaata cccatctata tcgtcagatt
     6301 ttaaagcatt aaataaaaat gctgttttgc ccataccatc tttcacttct acagtatttt
     6361 tggtctcttc ttctattaaa attttataca tatttgtaat aatcgatggc tcggagccaa
     6421 gctttccagc taacgtaatt ttatcacctt tttgtgcaaa cataggaata gcgatagcca
     6481 gtataataat catcactata acacctaacg tcatcaataa ctttttataa gataatttag
     6541 ccataaatct taaaattaaa tcaaatataa ttgccaataa ggctgctgga attgcaccta
     6601 ataatatcaa cgatgcattg ttacggtcta tacctaataa aattaaatct cctagtccgc
     6661 ctgcaccaat taatgctgct agtgttgctg tacctataat taataccata gccgttctta
     6721 caccagccat tataacaggc attgctatcg gaagttcgac tttagttaaa cgtctaaatg
     6781 gtttcatacc tataccttta gccgcttcaa tgagtgatgg atcaacttct ttaattccag
     6841 tatacgtatt ccttaaaatt ggtaacaacg catacactac aagtgcaata attgctggca
     6901 cacgaccgat accaaataaa ggaatcatta aacctaataa tgccaacgat ggtatggttt
     6961 gaagaattgc cgcaatattc attacgattt cagatatcgt tttagtcttc gttaataaaa
     7021 tacctaatgg taccgcaata gcagttgcaa tcaataatgc gataaatgat atttgaatat
     7081 gttctatcat tgtcgaaaag agttgcccct tacgttcact caatatgtcg aaaaagttag
     7141 tcatgttgag ctacctcctt tttctgggac aaatatttga agatatcttt cctatcaata
     7201 acatattgac ctacgctatc ttcttgcatg acaatgacac gctcgctctc tgataaaagt
     7261 tgatacaata cttcaattgg ttgattgtca taaacaattg gataagcgct catagatgta
     7321 acctcatcga ttggtttcat aatatccaag tcacggataa ttgcgttctc ttcaacacat
     7381 ggcgcatcat cttctaaatg actacccata aattgtttaa caaattcact ttgaggatta
     7441 tttttaaatc cttctggtgt gtcaatttgt tcaatatgcc cttcattcaa aagacaaatc
     7501 ttatcaccaa gtttcatcgc ctcttgaata tcatgtgtaa caaatatgat tgtcttctta
     7561 attttagttt gtaattcaat taaatcatct tgaagttttt ctcggctgat tgggtctaat
     7621 gcactaaacg gttcatccat taaaataact ggtggatcag ctgctaacgc acgtataact
     7681 cctacacgtt gtcgttgccc ccctgacaat tcatcaggtt ttctgttttt atatttttca
     7741 ggttctaatc caaccatttc aagtaattca tctactcttt tatctatatc tttttctttc
     7801 cactttttca tttgtggcac ttgtgcaata ttttctttga ttgtcatatg tgggaataat
     7861 gcaatctgct gcaatacgta tccaatatcc caacgcattt cgtatactgg ataatcactt
     7921 attggtttat ctttaaaata aatataacct tcacttaagt gaatgagtcg attaatcatt
     7981 tttaatgtcg tagtttttcc acaacctgaa ggtccaatta gcacaaaaaa ttcaccctca
     8041 ttaatattga aactaatgtt atcgacagca acatgtttgc cataacgctt agttacattt
     8101 ttaaacttaa tcactttgcc acctcttttt ttctcatagc ataaaaccga gattatatgt
     8161 atgtattccc tatttaacca cgtttattac aattttcaaa tttaaatgat ttatccttga
     8221 acttttttaa taaaataatg aataataggt aatctccagt taagaaatag tgttatttta
     8281 ccttgaattc aaaaaaacac ccagtaaaac aaggaatgct tactaggtgt cttcactata
     8341 ctttggcttt ataattttga atcgtttcta aaaatgctgg acaataatgt tttaatttgt
     8401 aactacctac gccatcaata ttaatcatat cttgtttcga agcaggctta cgtttagcaa
     8461 attcctccaa cgtgtaatca gaaaatatac ttacaggtgc tatcgttaat ttgtcactta
     8521 actttttacg aacttctacc aactgactga ataatactcg gtcaacccct tcaaccgtat
     8581 ttataaatac tttttcagtc gctttttgct taaatggtgt tgtgaatact tctacttcat
     8641 tactgagtaa ttttttaatt gaagtatcac acattaatat ttcgtcattt tcatttaaga
     8701 accctttgaa tcttaattca tctattaagt gacttaattc tgatgttgtg taacctttca
     8761 ttaaaccatg ggttgaaatt tggtcataac ctttatactt aatataatct gttgactctc
     8821 ctcttaacac ttgaatgata acactataac tctcttgttg tttcatacga gcgatgcaac
     8881 taataatcat cttagcttct tgtgtcatat tatatgattt atcttgttga acacaattac
     8941 tacattgttc acattcttct aatttttcat tcggttcaaa ataatggaca attgttgctt
     9001 ctagacattt ttttgttttt gtatattgaa tcattttagt taacttttcg cccattttat
     9061 ctttatagtc atcatcagct tgagagactg ttataaaata ctcgtgtaaa ttgatatcgc
     9121 gttcgctaaa taacaaaata cattcacttt tcaacccgtc acgacctgca cgacccgctt
     9181 cttgataata agattctaaa tctccaggca tattataatg aataacaaag cgtacattgg
     9241 atttatcaat acccatacca aaagcatttg tagcaacgac tactttaaca cgatcaaata
     9301 agaaatcatt ctgcgcttct tctctttctt tattgctcaa acctgcatga tatataacac
     9361 tttcaatttt ctgactttct aaggcttctt gaagctcttc aacttgctta cgtgtagaac
     9421 aataaataat acctgcatct tcatcgtgtg ttttaatata atccaatata aatttttgac
     9481 gttgataagt aggatttact ttaaaaatta agtttctacg cttagtactc gttttaattt
     9541 gatcagtttg agcgatattt aacttttctc taatatcttg ctgtacttca accgtggcag
     9601 ttgctgtcaa cgctattatt gtaaaatctt gaggtaacgt aaatactttt gaaataacat
     9661 tttggtaact cggcctgaaa tcatgacccc atttagaaat acaatgcgct tcatcaaacg
     9721 cgactaagtg aatctttata cgctgaagca tatttaaaaa atatcggttt tcaaatcgtt
     9781 ctggtgcaac atacaaaaat tgaatttctc catttgataa tgctttttca atacgttgtt
     9841 gctctttttg agtcaaacta ctatttaaaa aagcagcttg aattcccatc gcttttaatt
     9901 gatccacttg atctttcatt aatgatatta gtggacttat tacaattgtt gtaccaccta
     9961 acaataaacc tggtacttga tagcatatag acttacctcc accagttggt aagacaccaa
    10021 gcacattacg atggtctaat actttgctaa taatttcttc ttgtcctggt cgaaacgttt
    10081 catacccaaa gtaatgcgat aatgtttgtt gcatcataaa ttgacccctt attgttgttc
    10141 tttaatttct tctaactcac tccatcttgt gatgtctaaa tcatattgaa tttcaagttg
    10201 ttctttttct tcgtttaatt ctttaatttt cccataatct gcacttgcct caatcatgag
    10261 cacatcaatt tcttccattc ttacttccgc ttgttctatg cgtttcatca attgttcata
    10321 ttctaatttt tctttatatg ataaaccatt tttcttacgt acagttgtag aagatttaga
    10381 ttgttgcttc aatgtggatt tatttttatc taatgatttt ttataacttt cataatcttc
    10441 aaaagttccg ataatctttt ccatctgacc atcatgaata aaccaatatg actgtgcaac
    10501 tttatttaag aagtagcgat catggcttac ggtaatcact gtaccaccga aagtatgaat
    10561 ataatcttca agtattgtta aagtctcagt atctaaatca tttgtcggtt catctaacaa
    10621 cagaacattt ggctggtgta cgagtagacg taataaatac aaacgctttt gctctccacc
    10681 agataattta taaacttttt taccatgagt tgcacttgga aataaaaatc gttcaagaag
    10741 ttgtgtaata gataccgagg ttccatcttt ttcttttgcg atctcacttt cttctcttaa
    10801 ataatcaatc atacgaatat ctctatccag ggtctcatct gtttgcttaa aataagctac
    10861 tttaaccgtc tgcccagtct tcaatttacc ttcgaattgt tggtcttctc cactcaaaat
    10921 atttaagagt gttgttttac cagctccatt tggcccaaca acaccaatac gctcaccttt
    10981 ttgaataatt tccgtcagat gttcaaataa tactttatca ttaatagcct ttgataagtc
    11041 ttctaattcg aacacttgct tacctaatct tgaataagca agattcaatt cacctttatc
    11101 gtctttatat tgctggttaa cttcattttc taggtcatta aatcgattaa ttctagcttg
    11161 ttgctttgta gtacgagcct tagctccagc cctcatccaa gcaagttctt ccttatataa
    11221 agctcgttgc ttttgttgtt gcttttgaag tgttacttct ctttcagcgc gcatttcaat
    11281 ataagattca tagttaccag gatatgacgc taacttacct ctgtttagtt caataattct
    11341 agtggaaact tcatttaaaa aatatcgatc atgggttacg aataaaacag tatgaggata
    11401 ttgcttcaca taattgatca accagctgat tgattcgaag tctaaatggt tcgtaggttc
    11461 atctaataac aataaatctg gttgttctat taatgtttta gcaagtacaa cacgtttttg
    11521 ttgtccgccg gataattctt taatgtattt agtagtatca tgtataccta gttttgagag
    11581 gattgtttta atttcagcgt tatagtccca agcatcatgt tgatccatag catcttgcgc
    11641 atccatcatt cgcttgaaca atttatcact ttggtcatcc gcataagctt gtactgcctg
    11701 ctcatattgc ttgatgatgc gtaaagttgt tgtatcagaa cttaatactg catcaaaaac
    11761 tgtcatatct tcattaaggt cctgtttctg agacgaatat cgaattcgat attgatttgg
    11821 atgcataaca ttggctgtaa aatcatcatc aataccacca attactttta acaacgtact
    11881 tttccctgta ccatttatgc ctactaaacc tattttttca ccttctgaaa ttgataaatc
    11941 taggttatcg aatatagtct tatcggcata agatttattt aaatgttcaa ttttatatgc
    12001 ttccataccc atcttccttc ttctgttgaa atctctacgt acttaaatca gttctataca
    12061 ttatacacct ttttgaaatc aaaagaaatc gataccgtta agtgtcataa tttaatatat
    12121 tgttgcttca actataaata aaacttgtta aggctttgat gactatgcta atgatcttta
    12181 taatatacct ttttatcaac acatataatg taaaacataa tataaaagaa cataataaaa
    12241 acccggattg atattttatc aatccgagtt cgtgtttaga tattattttt tagagtttgc
    12301 tttaggtcct gtttcatatt tatacttcga aggatttacc tttttgaagt ctggattttt
    12361 gtagaatcta aacaaatcac cattaagcac gttgtcactc atttcgagat ccttttcaac
    12421 ttgcttttta ttcttttcga aatcagctgg ttgagtagtt atgagttcat tatttttatt
    12481 agaataaatc ttaccattaa catatttata atcttttgtt ataaagtcac catttctgaa
    12541 tggaactact tgattatgac ctttagagaa taaatcagta ccgaacatta aatagttctt
    12601 cgtatctata ccagccaaat gtaaaattgt tggcattaca tcgacttgac cagcatattc
    12661 attattgata ccaccagatt taccagggat tttaatccag aaaccagttc tgtttaaatc
    12721 tgtaaattta gccggtgtga ttttttcacc taatagtttt tccatggcat tgttatggtt
    12781 ttcagagata ccatagtggt caccataaat cataatcact gaattgtcat ataatccttt
    12841 tttcttcaag tcattaatat attcttctaa tgcttcgtct aaataacgtg ctgtttgaat
    12901 ataaccatca actgttgcat cacctgtgtt tgatttctca atagttgcat ccttttcatc
    12961 taatgtgaat ggatagtggt tagtcaatgt aattaaatga gaatagaatg gtgatttcat
    13021 cttagcttga taattagcag aatctttaaa gaaaattttg tctttcaagc ctaagtttac
    13081 aacgttttta tctgacatgt catagtatgt tgcatcatag aatttatcga taccaaagtg
    13141 tttatatact tggtctctgt tccagaatgt tttatagtca ccgtgcatga catcagattt
    13201 gtagccttgc ttttgatcta aaattgctgg taatgactga tacgtattat ctccttttaa
    13261 tgaaaaggca gaaccttgcg gtaaaccgta taaactgtta tccattgtaa attcagagtc
    13321 agatgtttta ccttgacctg tttgatggaa aaagttaggg aagtatgtga attgctcttt
    13381 cccacttgat aatttgttta aaaacggtgt tacttcttta ccattaacct ttttattaat
    13441 taagaaggtt tggaaacttt ctaaatgaat cttaataata tttttcttct ttgccacccc
    13501 ataatattct gggttaggct ctgtttgacg ttgtttcgta taatttaata cttttgttaa
    13561 gtcatcttca gatgctagcg ctttttgttg attattttcg atagttttaa caccatcgta
    13621 tactgtaaag ttataaggtc ctaaatattt cactaaatat ttatggtcaa atgtacgtgt
    13681 taataattct ggtctgtcag tttcagcaaa agctaagttt aagaagaata atgctactga
    13741 agccgccatt acgacaggaa caaatttctt actaaatgct tttgtgtcta accattttgt
    13801 tttaaatatt aaaatgaata agtaaactaa cgtatcaatg aaataaacaa agtcatacca
    13861 tttgaatgat gcactaaccg caccacccat agattctacg ttacctactt ggtttaaagt
    13921 actaaacgtt aaaaaatcag agaagaatct aaagtacaca acattggcat ataataggaa
    13981 cgtcaataag aagccgccta tgaacatgaa ccaaaatgct tttttgcctt taaagaatag
    14041 gaacacactt aaaaccagtg ctactaaact ataaggattc atcaataata ttaagttttg
    14101 tactaaacct ttaacaccta aagaaaaatc aacataataa gaaaaatacg tcttcaaggt
    14161 aatcgttatt acggttaata agaagaacgc aaaaagacta attttctttt tttgtgaact
    14221 catgattctt tcccccgtta tttagataat aaatcttgcg aaagtacttg aataaattag
    14281 atattaacat tatgtagtta attaataagt gcgtttaaaa gttaacattg tcataattat
    14341 agtaattact ttcagattca agtttataat tttcattatt tgtagctttc aactttgatt
    14401 taacaagtat tttgggctac aa
//
LOCUS       DALPQQ010000064        14388 bp    DNA     linear   BCT 22-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus strain K18-6-464
            SAMD00233528-rid16434743.denovo.064, whole genome shotgun sequence.
ACCESSION   DALPQQ010000064 DALPQQ010000000
VERSION     DALPQQ010000064.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMD00233528
            Sequence Read Archive: DRR236061
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 14388)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 14388)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001543423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001543423.1
            Genome Coverage       :: 77x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/22/2022 17:09:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,811
            CDSs (total)                      :: 2,743
            Genes (coding)                    :: 2,689
            CDSs (with protein)               :: 2,689
            Genes (RNA)                       :: 68
            rRNAs                             :: 2, 4, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 4, 2 (16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 54
            CDSs (without protein)            :: 54
            Pseudo Genes (ambiguous residues) :: 0 of 54
            Pseudo Genes (frameshifted)       :: 27 of 54
            Pseudo Genes (incomplete)         :: 27 of 54
            Pseudo Genes (internal stop)      :: 10 of 54
            Pseudo Genes (multiple problems)  :: 10 of 54
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..14388
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMD00233528-rid16434743.denovo.064"
                     /strain="K18-6-464"
                     /db_xref="taxon:1280"
                     /geo_loc_name="Japan: Niigata"
     gene            489..1331
                     /locus_tag="O7798_001570"
     CDS             489..1331
                     /locus_tag="O7798_001570"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500367.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HDC2863832.1"
                     /translation="MKIGDISIHYLNGGNTKMDGGAMFGVVPKPLWSKQYNANERNQI
                     NLPTHPILIQTAQYNLIIDAGIGNGKLSEKQLRNFGVDEESHIIADLANYNLTPKDID
                     YVLMTHMHFDHAAGLTDQAGHAIFENAIHVVQQDEWHEFIAPNIRSKSTYWDKNKGDY
                     SNKLILFEKHFEPVLGIKMQHSGGHSFGHTIITIESQGDKAVHMGDIFPTTAHKNPLW
                     VTAYDDYPMQSIREKERMIPYFIQQQYWFLFYHDENYFAVKYSDNGENIDAYILRETL
                     VDNN"
     gene            complement(1456..1767)
                     /locus_tag="O7798_001571"
     CDS             complement(1456..1767)
                     /locus_tag="O7798_001571"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500366.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PepSY domain-containing protein"
                     /protein_id="HDC2863833.1"
                     /translation="MTKLKYIIPTIIAVAIVIISTISIIQFINRKRYNPVKVLNEVKS
                     YFMNVKGSYIVYEPFVHPETDKYRLVYQGGITTIKNGQNIHYDFYADAYTGEVINIVE
                     R"
     gene            1854..2930
                     /locus_tag="O7798_001572"
     CDS             1854..2930
                     /locus_tag="O7798_001572"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500365.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M42 family metallopeptidase"
                     /protein_id="HDC2863834.1"
                     /translation="MNINKKVTLQRIQTLTELHGAPGFEEEVKNYMTQQMAPYVDEFI
                     ENRMGGFFGVKKSKNPNAKRVMIAAHMDEIGFMITNITKNGMIQFTNLGGVANDIWQG
                     QRLVIKNRNGDKIIGVVSNIPKHFRTGSEGAPEIKDLTLDIGAQNEDEVRERGIDIGD
                     TIVPHTPFTQLSEHRYSAKAWDNRYGCVLAIEILELLKDIELDVDLYVGANVQEEVGL
                     RGAKASAEMIDPDVAFVVDCSPANDVKGNQPLSGELGKGTLIRIKDGTMILKPVFRDY
                     LLKLVEAHDIEHQYYMSPGGTDGGEIHKANIGIPTAVIGVCARYIHSTDSVFDIRDYF
                     AARSLLSEAICNLDNNQIETLQYK"
     gene            2995..3306
                     /locus_tag="O7798_001573"
     CDS             2995..3306
                     /locus_tag="O7798_001573"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500364.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin family protein"
                     /protein_id="HDC2863835.1"
                     /translation="MKQLESEQQFESLKQGATVFEFTAGWCPDCRVIEPDLPELEARY
                     PMFDFVSVDRDKFMDICIENGIMGIPSFLVYKNGELLGSYIGKERKSIEQIDAFLAQY
                     V"
     gene            3406..4263
                     /locus_tag="O7798_001574"
     CDS             3406..4263
                     /locus_tag="O7798_001574"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500363.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1444 domain-containing protein"
                     /protein_id="HDC2863836.1"
                     /translation="MNTFQMRDKLKERLSHLDVDFKFNREEETLRIYRTDNNKGITIK
                     LNAIVAKYEDKKEKIVDEIVYYVDEAIAQMADKTLESISSSQIMPVIRATSFDKKTKQ
                     GVPFIYDEHTAETAVYYAVDLGKSYRLIDESMLEDLKLTEQQIREMSLFNVRKLSNSY
                     TTDEVKGNIFYFINSNDGYDASRILNTAFLNEIEAQCQGEMLVAVPHQDVLIIADIRN
                     KTGYDVMAHLTMEFFTKGLVPITSLSFGYKQGHLEPIFILGKNNKQKRDPNVIQRLEA
                     NRRKFNKDK"
     gene            4292..4888
                     /locus_tag="O7798_001575"
     CDS             4292..4888
                     /locus_tag="O7798_001575"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500362.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4479 domain-containing protein"
                     /protein_id="HDC2863837.1"
                     /translation="MNLFYNPKYVGDVAFLQIEPVEGELNYNKKGNVVEITNEGNVVG
                     YNIFEISKDITIEEKGHIKLTDELVNVFQKRISEAGFDYKLNADLSPKFVVGYVETKD
                     KHPDADKLSVLNVNVGNDTLQIVCGAPNVEAGQKVVVAKVGAVMPSGMVIKDAELRGV
                     ASSGMICSMKELNLPNAPEEKGIMVLNDSYEIGQAFFE"
     gene            4909..8733
                     /locus_tag="O7798_001576"
     CDS             4909..8733
                     /locus_tag="O7798_001576"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500361.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA translocase FtsK"
                     /protein_id="HDC2863838.1"
                     /translation="MSWFDKLFGEDNDSNDDLIHRKKKRRQESQNIDNDHDSLLPQNN
                     DIYSRPRGKFRFPMSVAYENENVEQSADTISDEKEQYHRDYRKQSHDSRSQKRHRRRR
                     NQTTEEQNYSEQRGNSKISQQSIKYKDHSHYHTNKPGTYVSAINGIEKETHKPKTHNM
                     YSNNTNHRAKDSTPDYHKESFKTSEVPSAIFGTMKPKKLENGRIPVSKPSEKVESDKQ
                     KYDKYVAKTQTSQNKQLEQEKQNDSVVKQGTASKSSDENVSSTTKSMPNYSKVDNTIK
                     IENIYASQIVEEIRRERERKVLQKRRFKKALQQKREEHKNEEQDAIQRAIDEMYAKQA
                     ERYVGDSSLNDDSDLTDNSTDASQLHTNGIENETVSNDENKQASIQNEDTNDTHVDES
                     PYNYEEVSLNQVSTTKQLSDDEVTVSNVTSQHQSALQHNVEVNDKDELKNQSRLIADS
                     EEDGATNKEEYSGSQIDDAEFYELNDTEVDEDTTSNIEDNTNRNASEMHVDAPKTQEY
                     AVTESQVNNIDKTVDNEIELAPRHKKDDQTNLSVNSLKTNDVNDNHVVEDSSMNEIEK
                     NNAEITENVQNEAAESEQNVEEKTIENVNPKKQTEKVSTLSKRPFNVVMTPSDKKRMM
                     DRKKHSKVNVPELKPVQSKQAVSERMPASQATPSSRSDSQESNTNAYKTNNMTSNNVE
                     NNQLIGHAETENDYQNAQQYSEQKPSVDSTQTEIFEESQDDNQLENEQVDQSTSSSVS
                     EVSDITEESEETTHPNNTSGQQDNDDQQKDLQSSFSNKNEDTANENRPRTNQQDVATN
                     QAVQTSKPMIRKGPNIKLPSVSLLEEPQVIESDEDWITDKKKELNDALFYFNVPAEVQ
                     DVTEGPSVTRFELSVEKGVKVSRITALQDDIKMALAAKDIRIEAPIPGTSRVGIEVPN
                     QNPTTVNLRSIIESPSFKNAESKLTVAMGYRINNEPLLMDIAKTPHALIAGATGSGKS
                     VCINSILMSLLYKNHPEELRLLLIDPKMVELAPYNGLPHLVAPVITDVKAATQSLKWA
                     VEEMERRYKLFAHYHVRNITAFNKKAPYDERMPKIVIVIDELADLMMMAPQEVEQSIA
                     RIAQKARACGIHMLVATQRPSVNVITGLIKANIPTRIAFMVSSSVDSRTILDSGGAER
                     LLGYGDMLYLGSGMNKPIRVQGTFVSDDEIDDVVDFIKQQREPDYLFEEKELLKKTQT
                     QSQDELFDDVCAFMVNEGHISTSLIQRHFQIGYNRAARIIDQLEQLGYVSSANGSKPR
                     DVYVTEADLNKE"
     gene            8757..10070
                     /locus_tag="O7798_001577"
     CDS             8757..10070
                     /locus_tag="O7798_001577"
                     /EC_number="6.3.2.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500360.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylmuramate--L-alanine ligase"
                     /protein_id="HDC2863839.1"
                     /translation="MTHYHFVGIKGSGMSSLAQIMHDLGHEVQGSDIENYVFTEVALR
                     NKGIKILPFDANNIKEDMVVIQGNAFASSHEEIVRAHQLKLDVVSYNDFLGQIIDQYT
                     SVAVTGAHGKTSTTGLLSHVMNGDKKTSFLIGDGTGMGLPESDYFAFEACEYRRHFLS
                     YKPDYAIITNIDFDHPDYFKDINDVFDAFQEMAHNVKKGIIAWGDDEHLRKIEADVPI
                     YYYGFKDSDDIYAQNIQITDKGTAFDVYVDGEFYDHFLSPQYGDHTVLNALAVIAISY
                     LEKLDVTNIKEALETFGGVKRRFNETTIANQVIVDDYAHHPREISATIETARKKYPHK
                     EVVAVFQPHTFSRTQAFLNEFAESLSKADRVFLCEIFGSIRENTGALTIQDLIDKIEG
                     ASLINEDSINVLEQFDNAVILFMGAGDIQKLQNAYLDKLGMKNAF"
     gene            10144..10635
                     /locus_tag="O7798_001578"
     CDS             10144..10635
                     /locus_tag="O7798_001578"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500359.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF948 domain-containing protein"
                     /protein_id="HDC2863840.1"
                     /translation="MDWILPIAGIIAAIAFLILCIGIVAVLNSVKKNLDYVAKTLDGV
                     EGQVQGITRETTDLLHKVNRLTEDIQGKVDRLNSVVDAVKGIGDSVQTLNSSVDRVTN
                     SITHNISQNEDKISQVVQWSNVAMEIADKWQNRHYRRGSANYKANNVATDANHSYTSR
                     VDK"
     gene            10709..12226
                     /locus_tag="O7798_001579"
     CDS             10709..12226
                     /locus_tag="O7798_001579"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500358.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDC2863841.1"
                     /translation="MTQQQNDKRTLKNKHTYQNEPLPNRKDFVVSFITGALVGSALGL
                     YFKNKVYQKADDLKVKEQELSQKFEERKTQLEETVAYTKERVEGFLNKSKNEQAALKA
                     QQAAIKEEASANNLSDTSQEAQEIQEAKREAQAEADKSVAVSNKESKAVALKAQQAAI
                     KEEASANNLSDTSQEAQEIQEAKKEAQAETDKSAAVSNEEPKAVALKAQQAAIKEEAS
                     ANNLSDTSQEAQEVQEAKKEAQAETDKSAAVSNEEPKAVALKAQQAAIKEEASANNLS
                     DISQEAQEVQEAKKEAQAEKDSDTLTKDASAAKVEVSKPESQAERLANAAKQKQAKLT
                     PGSKESQLTEALFAEKPVAKNDLKEIPQLVTKKNDVSETETVNIDNKDTVKQKEAKFE
                     NGVITRKADEKTTNNTAVDKKSGKQSKKTTPSNKRNASKASTNKTSGQKKQHNKKSSQ
                     GAKKQSSSSKSTQKNNQTSNKNSKTTNAKSSNASKTPNAKVEKAKSKIEKRTFND"
     gene            12361..12465
                     /locus_tag="O7798_001580"
     CDS             12361..12465
                     /locus_tag="O7798_001580"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500357.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDC2863842.1"
                     /translation="MRSFHVFMLFETSLDNNSDIAHFKLKMEKYSIIK"
     gene            12926..14017
                     /locus_tag="O7798_001581"
     CDS             12926..14017
                     /locus_tag="O7798_001581"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500356.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional 3-deoxy-7-phosphoheptulonate
                     synthase/chorismate mutase"
                     /protein_id="HDC2863843.1"
                     /translation="MSNKLESYRSEIVSLNHQILDLLSKRGELAQKIGEEKLKQGTRI
                     YDPQREKEMLNDLIDSNKGPFNDNTIKQLFKEIFKASTDLQKSENEKHLYVSRKLKPE
                     DTIVTFDNGGIIGDGNKSFVFGPCSVESFEQVEAVAKNLHAKGEKFIRGGAFKPRTSP
                     YDFQGLGVEGLKILKQIKDKYDLNVVSEIVNPNDFEVADEYLDVFQIGARNMQNFELL
                     KEAGRTKKPILLKRGLSATIEEFVYAAEYIASQGNQNIILCERGIRTYEKATRNTLDI
                     SAVPILKQGTHLPVMVDVTHSTGRKDIMLPTAKAALAVGADGVMAEVHPDPSVALSDA
                     GQQMDLDEFQAFYDELKPLADLYNAKKLK"
BASE COUNT         5617 a         1952 c         2634 g         4185 t
ORIGIN      
        1 attccattca caaaaataga gcacttatga gggtatgtac acatacaatc ataagtgttt
       61 tttcgtacta taatggttct atagataaag gttctataat aaatcggact gatggaaaaa
      121 gtttttaact tttcatctgt ccgatttttt gattttgaat ataaaaaaag cgcaattatc
      181 tctataatta aaagtgacta aacaaataac taaaggagat aatgcgccta tgaacaatgt
      241 tatactaaat acctttgatt taaaagaata aagcttgcat tttacttgta aattttaatt
      301 attaatttaa aattacaggc cgatggttat gatgcattta catataatat gattgcatta
      361 atctttataa gtagttagaa gtgtattagt gtggggcgtt tcgtttttgt tcgcatttat
      421 gaatagtgat atgatgtaat aaacacatgc taattgtaat aacgaataca gaaagaatag
      481 gtgatgttat gaaaatcggg gatatatcta ttcattatct aaatggtggc aatacaaaaa
      541 tggatggcgg tgcaatgttt ggtgttgttc cgaagccgtt gtggtcaaag caatacaatg
      601 caaatgaacg aaatcaaatc aatttaccga cacatccaat tttgattcaa acggctcaat
      661 ataatttgat tatagatgca ggtattggta atggtaaatt atctgaaaag caattacgta
      721 attttggagt agatgaagaa agtcatataa ttgctgattt ggcaaattat aatttaacgc
      781 caaaggatat tgattatgtg ctaatgacac atatgcattt tgatcatgct gccggtttga
      841 ctgatcaagc aggacatgca atttttgaaa atgcgattca tgttgtgcaa caagatgagt
      901 ggcatgagtt tattgcacct aatataagaa gtaaatcaac ttactgggat aagaataaag
      961 gcgattatag taacaagttg attttattcg aaaaacattt tgaaccggtt ctgggtatca
     1021 agatgcaaca tagtggaggt catagctttg gccacacgat tattacgatt gaaagtcaag
     1081 gagataaagc agttcatatg ggtgatatat tcccaactac tgcacataaa aatcctctat
     1141 gggtaacggc atatgatgat tatcctatgc aatcgattcg tgaaaaagaa cgcatgatac
     1201 catattttat tcagcaacaa tattggttct tgttttatca tgatgaaaac tactttgctg
     1261 taaaatacag cgataatggt gaaaacatag atgcatatat tttacgtgaa acattagttg
     1321 ataataacta aaataaagat gtattactaa acaaattttc aaaaataaaa aattgagcca
     1381 catccaatct tactaattag ggtgtggctc atttttaagt tttacgatcc aaatcaaata
     1441 tggataaaat tcgtattaac gctctacaat gttaatgact tcaccagtat atgcatctgc
     1501 ataaaaatca taatgaatat tttgaccatt tttaatagtt gtaattccac cttgataaac
     1561 taaacggtat ttatcagttt caggatgaac gaatggttca taaacgatat atgagccttt
     1621 gacattcata aaatatgatt ttacttcatt aagtacttta acgggattat agcgtttacg
     1681 attaataaat tggatgattg aaatggtaga aataattaca atggctactg caattattgt
     1741 tggaattata tatttcagtt tagtcatcat ttatgctccc ttgatttcaa attcatatca
     1801 ttagtttacc atattgaaga tgatataata acttataagg agtgagaact tttatgaaca
     1861 taaataaaaa agtaacatta caacgaattc aaactttaac tgagcttcat ggggcaccag
     1921 gttttgaaga agaagtaaaa aattatatga ctcagcaaat ggcgccgtac gtagatgaat
     1981 ttattgaaaa tcgtatgggt ggattttttg gtgtgaaaaa atctaaaaat ccaaatgcaa
     2041 aacgtgtaat gattgcagca catatggatg aaatcggatt tatgattaca aatatcacta
     2101 aaaatggaat gattcaattc acaaatttag gtggtgttgc aaatgatatt tggcaaggac
     2161 aacgcttagt aattaaaaat agaaatggcg ataaaattat cggtgttgtt tctaatatac
     2221 ctaaacattt tcgtactggt agtgaaggtg caccggaaat taaagattta acattagata
     2281 taggtgctca aaatgaagat gaggtgcgtg agcgcggaat agatatagga gatacaattg
     2341 tacctcacac gccattcaca cagttatctg aacatcgata tagtgctaaa gcatgggata
     2401 atcgttatgg ttgtgtcttg gcaattgaaa tactagaatt attaaaagat atagaattag
     2461 atgtagactt gtatgttggc gcaaatgttc aagaagaggt tggattacga ggtgcgaaag
     2521 catctgcaga gatgatagac ccagacgttg catttgtagt tgattgttca cctgccaatg
     2581 acgttaaagg aaaccaacca ttatctggtg aacttggtaa agggacgtta attcgcataa
     2641 aagacggtac aatgatttta aagcctgtat ttagagacta tttattaaag ttagtagaag
     2701 cacatgacat tgaacatcaa tactatatgt caccaggtgg aacagatggt ggagaaattc
     2761 ataaagctaa tattggtatt ccgactgcag ttattggtgt atgtgcacga tatattcata
     2821 gtacagactc agtatttgat ataagagact attttgcagc tagatcttta ctttcagaag
     2881 ccatttgtaa tttagataat aatcaaatag aaacattaca atataaataa tcgggtaata
     2941 acaactatta tctctaaata gttatatata atcattaatt aaggagacat aaaaatgaaa
     3001 caacttgaat cagaacaaca atttgaatct ttaaaacaag gtgctacagt atttgaattc
     3061 actgcaggct ggtgtccaga ttgtagagtg atagaaccag atttaccgga attagaagcg
     3121 agatatccta tgtttgactt cgtatcagta gaccgtgata aatttatgga tatttgtatt
     3181 gaaaatggta ttatgggtat tccaagtttt ctagtatata aaaatggaga actgcttgga
     3241 agttatattg gaaaagaacg aaaatcaatt gaacagatag atgcattttt agctcaatac
     3301 gtgtaattta gactagagaa aaacggggta atactcgttt ttctctgtta ctatgtgttg
     3361 atttattgta aactattata aggtgcgaaa ttaggagtgt tacatatgaa tacctttcaa
     3421 atgagagata aattaaagga acgtttaagc catttagacg ttgattttaa atttaatcgt
     3481 gaagaagaaa ctttgcgtat ttatcgaaca gataataaca aaggtatcac gattaaactt
     3541 aacgctatag tcgcaaaata tgaagataaa aaagaaaaaa ttgtagatga aattgtttat
     3601 tacgttgatg aagctattgc acaaatggca gataaaaccc ttgagagtat atcatctagt
     3661 caaattatgc ctgtcattag agcgactagc tttgataaaa aaactaaaca aggtgttcct
     3721 tttatctatg atgagcatac tgcagaaaca gcagtttatt atgcagtcga tttagggaaa
     3781 tcatatcgtc taattgacga aagcatgtta gaggatttga agttaactga acaacaaata
     3841 agagaaatgt ctctgtttaa tgttagaaaa ttgtcaaatt catatacgac tgatgaagta
     3901 aaaggtaata ttttttattt tattaactca aatgacgggt atgatgcaag taggatacta
     3961 aatactgcat ttttaaatga aattgaggca caatgtcaag gcgaaatgct cgtagcagtg
     4021 ccacaccaag atgtgttaat tattgcagat atacgcaata aaacaggata tgatgtgatg
     4081 gcacatttaa caatggaatt tttcactaaa ggtctagttc caattacatc attatccttt
     4141 ggatataaac agggtcatct tgaaccgata tttattttag gtaaaaataa taaacaaaaa
     4201 agagatccaa acgtgattca gcgtttagaa gcaaatcgtc gtaaatttaa taaagataaa
     4261 tagaaataat tggataagga gttttgtcat aatgaattta ttttacaatc ctaaatatgt
     4321 aggagatgtc gcatttttac aaattgaacc agttgaaggt gaattaaact acaataaaaa
     4381 aggtaatgtt gttgaaatta ctaatgaagg taatgttgta ggttataata tttttgaaat
     4441 ttcaaaagat ataacaattg aagaaaaagg tcatattaaa ttaactgatg aacttgtaaa
     4501 tgtattccaa aagcgtattt cagaagctgg ttttgattat aaattaaatg ctgatctatc
     4561 accgaaattt gtagttggct acgttgaaac taaagacaaa catcctgatg cagataaatt
     4621 aagtgtacta aatgtaaacg ttggaaatga cacattacaa attgtatgtg gcgcgcctaa
     4681 cgttgaagct ggacagaaag ttgttgttgc taaagtaggt gcagtgatgc ctagcggtat
     4741 ggtaattaaa gatgctgaat tacgtggtgt tgcctcaagc ggtatgattt gttcaatgaa
     4801 agaattgaat ttacctaatg cacctgaaga aaaaggtatt atggtattaa atgacagcta
     4861 tgaaattgga caagcatttt ttgaataatt aaggaaggta gtgaaaatat gagctggttt
     4921 gataaattat tcggcgaaga taatgattca aatgatgact tgattcatag aaagaaaaaa
     4981 agacgtcaag aatcacaaaa tatagataac gatcatgact cattactgcc tcaaaataat
     5041 gatatttata gtcgtccgag gggaaaattc cgttttccta tgagcgtagc ttatgaaaat
     5101 gaaaatgttg aacaatctgc agatactatt tcagatgaaa aagaacaata ccatcgagac
     5161 tatcgcaaac aaagccacga ttctcgttca caaaaacgac atcgccgtag aagaaatcaa
     5221 acaactgaag aacaaaatta tagtgaacaa cgtgggaatt ctaaaatatc acagcaaagt
     5281 ataaaatata aagatcattc acattaccat acgaataagc caggtacata tgtttctgca
     5341 attaatggta ttgagaagga aacgcacaag ccaaaaacac ataatatgta ttctaataat
     5401 acaaatcatc gtgctaaaga ttcaactcca gattatcaca aagaaagttt caagacttca
     5461 gaggtaccgt cagctatttt tggcacaatg aaacctaaaa agttagaaaa tggtcgtatc
     5521 cctgtaagta aaccttcaga aaaagttgag tcagataaac aaaaatatga taaatatgta
     5581 gctaagacgc aaacgtctca aaataaacaa ttagaacaag aaaaacaaaa tgatagtgtt
     5641 gtcaaacaag gaactgcatc taaatcatct gatgaaaatg tatcatcaac aacaaaatca
     5701 atgcctaatt attcaaaagt tgataatact atcaaaattg aaaatattta tgcttcacaa
     5761 attgttgaag aaattagacg tgaacgagaa cgtaaagtgc ttcaaaagcg tcgatttaaa
     5821 aaagcgttgc aacaaaagcg tgaagaacat aaaaacgaag agcaagatgc aatacaacgt
     5881 gcaattgatg aaatgtatgc taaacaagcg gaacgctatg ttggtgatag ttcattaaat
     5941 gatgatagtg acttaacaga taatagtaca gatgctagtc agcttcatac aaatggcata
     6001 gagaatgaaa ctgtatcaaa tgatgaaaat aaacaagcgt caatacaaaa tgaagacact
     6061 aatgacactc atgtagatga aagtccatac aattatgagg aagttagttt gaatcaagta
     6121 tcgacaacaa aacaattgtc agatgatgaa gttacggttt cgaatgtaac gtctcaacat
     6181 caatcagcac tacaacataa cgttgaagta aatgataaag atgaactaaa aaatcaatcc
     6241 agattaattg ctgattcaga agaagatgga gcaacgaata aagaagaata ttcaggaagt
     6301 caaatcgatg atgcagaatt ttatgaatta aatgatacag aagtagatga ggatactact
     6361 tcaaatatcg aagataatac caatagaaac gcgtctgaaa tgcatgtaga cgctcctaaa
     6421 acgcaagagt acgcagtaac tgaatctcaa gtaaataata tcgataaaac ggttgataat
     6481 gaaattgaat tagcaccgcg tcataaaaaa gatgaccaaa caaacttaag tgtcaactca
     6541 ttgaaaacga atgatgtgaa tgataatcat gttgtggaag attcaagcat gaatgaaata
     6601 gaaaagaata acgcagaaat tacagaaaat gtgcaaaacg aagcagctga aagtgaacaa
     6661 aatgtcgaag agaaaactat tgaaaacgta aatccaaaga aacagactga aaaggtttca
     6721 actttaagta aaagaccatt taatgttgtc atgacgccat ctgataaaaa gcgtatgatg
     6781 gatcgtaaaa agcattcaaa agtcaatgtg cctgaattaa agcctgtaca aagtaagcaa
     6841 gctgtgagtg aaagaatgcc tgcgagtcaa gccacaccat catcaagatc tgattcacaa
     6901 gagtcaaata caaatgcata taaaacaaat aatatgacat caaacaatgt tgagaacaat
     6961 caacttattg gtcatgcaga aacagaaaat gattatcaaa atgcacaaca atattcagag
     7021 cagaaacctt ctgttgattc aactcaaacg gaaatatttg aagaaagtca agatgataat
     7081 caattggaaa atgagcaagt tgatcaatca acttcgtctt cagtttcaga agtaagcgac
     7141 ataactgaag aaagcgaaga aacaacacat ccaaacaata ctagtggaca acaagataat
     7201 gatgatcaac aaaaagattt acagtcatca ttttcaaata aaaatgaaga tacagctaat
     7261 gaaaatagac ctcggacgaa ccaacaagat gttgcaacaa atcaagctgt acaaacatct
     7321 aagccgatga ttcgtaaagg cccaaatatt aaattgccaa gtgtttcatt actagaagaa
     7381 ccacaagtta ttgagtcgga cgaggactgg attacagata aaaagaaaga actgaatgac
     7441 gcattatttt actttaatgt acctgcagaa gtacaagatg taactgaagg tccaagtgtt
     7501 acaagatttg aattatcagt tgaaaaaggt gttaaagttt caagaattac ggcattacaa
     7561 gatgacatta aaatggcatt ggcagcgaaa gatattcgta tagaagcgcc tattccagga
     7621 actagtcgtg ttggtattga agttccgaac caaaatccaa cgacagtcaa cttacgttct
     7681 attattgaat ctccaagttt taaaaatgct gaatctaaat taacagttgc gatggggtat
     7741 agaattaata atgaaccatt acttatggat attgctaaaa cgccacacgc actaattgca
     7801 ggtgcaactg gatcagggaa atcagtttgt atcaatagta ttttgatgtc tttactatat
     7861 aaaaatcatc ctgaggaatt aagattatta cttatcgatc caaaaatggt tgaattagct
     7921 ccttataatg gtttgccaca tttagttgca ccggtaatta cagatgtcaa agcagctaca
     7981 cagagtttaa aatgggccgt agaagaaatg gaacgacgtt ataagttatt tgcacattac
     8041 catgtacgta atataacagc atttaacaaa aaagcaccat atgatgaaag aatgccaaaa
     8101 attgtcattg taattgatga gttggctgat ttaatgatga tggctccgca agaagttgaa
     8161 cagtctattg ctagaattgc tcaaaaagcg agagcatgtg gtattcatat gttagtagct
     8221 acgcaaagac catctgtcaa tgtaattaca ggtttaatta aagccaacat accaacaaga
     8281 attgcattta tggtatcatc aagtgtagat tcgagaacga tattagacag tggtggagca
     8341 gaacgcttgt taggatatgg cgatatgtta tatcttggta gcggtatgaa taaaccgatt
     8401 agagttcaag gtacatttgt ttctgatgac gaaattgatg atgttgttga ttttatcaaa
     8461 caacaaagag aaccggacta tctatttgaa gaaaaagaat tgttgaaaaa aacacaaaca
     8521 caatcacaag atgaattatt tgatgatgtt tgtgcattta tggttaatga aggacatatt
     8581 tcaacatcat taatccaaag acatttccaa attggctata atagagcagc aagaattatc
     8641 gatcaattag agcaactcgg ttatgtttcg agtgctaatg gttcaaaacc aagggatgtt
     8701 tatgttacgg aagcagattt aaataaagaa taattatgag taaggagttt tatataatga
     8761 cacactatca ttttgtcgga attaaaggtt ctggcatgag ttcattagca caaatcatgc
     8821 atgatttagg acatgaagtt caaggatcgg atattgagaa ctacgtattt acagaagttg
     8881 ctcttagaaa taaggggata aaaatattac catttgatgc taataacata aaagaagata
     8941 tggtagttat acaaggtaat gcattcgcga gtagccatga agaaatagta cgtgcacatc
     9001 aattgaaatt agatgttgta agttataatg attttttagg acagattatt gatcaatata
     9061 cttcagtagc tgtaactggt gcacatggta aaacttctac aacaggttta ttatcacatg
     9121 ttatgaatgg tgataaaaag acttcatttt taattggtga tggcacaggt atgggattgc
     9181 ctgaaagtga ttatttcgct tttgaggcat gtgaatatag acgtcacttt ttaagttata
     9241 aacctgatta cgcaattata acaaatattg atttcgatca tcctgattat tttaaagata
     9301 ttaatgatgt ttttgatgca ttccaagaaa tggcacataa tgttaaaaaa ggtattattg
     9361 cttggggtga tgatgaacat ctacgtaaaa ttgaagcaga tgttccaatt tattattatg
     9421 gatttaaaga ttcggatgac atttatgctc aaaatattca aattacggat aaaggtactg
     9481 cttttgatgt gtatgtggat ggtgagtttt atgatcactt cctgtctcca caatatggtg
     9541 accatacagt tttaaatgca ttagctgtaa ttgcgattag ttatttagag aagctagatg
     9601 ttacaaatat taaagaagca ttagaaacgt ttggtggtgt taaacgtcgt ttcaatgaaa
     9661 ctacaattgc aaatcaagtt attgtagatg attatgcaca ccatccaaga gaaattagtg
     9721 ctacaattga aacagcacga aagaaatatc cacataaaga agttgttgca gtatttcaac
     9781 cacacacttt ctctagaaca caggcatttt taaatgaatt tgcagaaagt ttaagtaaag
     9841 cagatcgtgt attcttatgt gaaatttttg gatcaattag agaaaatact ggcgcattaa
     9901 cgatacaaga tttaattgat aaaattgaag gtgcatcgtt aattaatgaa gattctatta
     9961 atgtattaga acaatttgat aatgctgtta ttttatttat gggtgcaggt gatattcaaa
    10021 aattacaaaa tgcatattta gataaattag gcatgaaaaa tgcgttttaa tatgtttata
    10081 atagagtagt atgggtattt attattaatg acattattac atgttaatta ggaggcgttt
    10141 ttaatggatt ggattttacc aattgctgga attatcgctg cgattgcatt cttaatttta
    10201 tgtatcggta tcgtagctgt attaaattct gttaagaaaa acttagatta tgttgcaaaa
    10261 acacttgacg gtgtagaagg tcaagttcaa ggtattactc gtgaaacaac agatttactt
    10321 cataaagtaa accgtttaac tgaggatatc caaggtaaag tagatcgttt aaactcagtt
    10381 gtagatgctg ttaaaggtat cggtgactca gtacaaacgt taaacagctc tgtagatcgt
    10441 gtaacaaatt caattacaca taatatttct caaaatgaag ataaaatctc acaagttgtt
    10501 caatggtcaa atgttgcaat ggaaattgca gacaaatggc aaaatagaca ctaccgtcgt
    10561 ggaagtgcaa attacaaagc taataatgta gcaactgatg caaatcatag ctatacttct
    10621 agagtagata aataattaat aattaaacaa atgcacttaa atgaggttgt tacttattta
    10681 agtgcatttg ttataggagg atatacaaat gacgcagcaa caaaatgata aaagaacatt
    10741 aaaaaataaa cacacttatc aaaatgaacc actaccaaac cgtaaagatt ttgttgttag
    10801 ttttataact ggcgcgcttg ttggttcagc tttaggtttg tattttaaaa ataaagttta
    10861 tcaaaaagca gatgatttaa aagtcaaaga acaagaactg tcgcaaaagt ttgaagaaag
    10921 aaaaacgcaa cttgaagaaa cggttgccta tacaaaagaa cgtgttgaag gatttttaaa
    10981 caaatctaaa aatgagcaag cggcattaaa ggcacaacaa gcagcgataa aagaagaagc
    11041 aagtgcaaat aatttaagtg atacatcaca agaagcacaa gagattcaag aagctaaaag
    11101 agaagcacaa gcagaagcgg ataaaagtgt ggctgtatca aataaagaat caaaagcagt
    11161 ggcattgaaa gcacaacaag cagcgataaa agaagaagca agtgcaaata atttgagtga
    11221 tacatcacaa gaggcacaag agattcaaga agctaaaaaa gaagcacaag cagaaacaga
    11281 taaaagtgca gctgtatcaa atgaagaacc aaaagcagtg gcattgaaag cacaacaagc
    11341 agcgataaaa gaagaagcaa gtgcaaataa tttaagtgat acatcacaag aggcacaaga
    11401 ggttcaagaa gctaaaaaag aagcacaagc agaaacagat aaaagtgcag ctgtatcaaa
    11461 tgaagaacca aaagcagtgg cattgaaagc acaacaagca gcgataaaag aagaagcaag
    11521 tgcaaataat ttaagtgata tatcacaaga ggcacaagag gttcaagaag ctaaaaaaga
    11581 agcacaagca gagaaagaca gtgacacatt aactaaagat gcaagtgcag caaaggtaga
    11641 agtatcaaaa ccagagtcac aagctgaaag attagcaaac gctgcaaaac agaagcaagc
    11701 taaattaaca ccaggttcaa aagagagtca attaactgaa gcgttatttg cagaaaaacc
    11761 agttgctaaa aatgacttga aagaaattcc tcaattagtt actaaaaaga atgatgtatc
    11821 agagacagag acggttaata tagataataa agacactgtt aaacaaaaag aagctaaatt
    11881 tgaaaatggt gttattacac gtaaagctga tgaaaaaaca actaataata cagctgttga
    11941 caagaaatca ggtaaacaat ctaaaaaaac aacaccttca aataaacgaa atgcatcaaa
    12001 agcatctaca aataaaactt caggtcagaa aaagcaacat aataagaaat catcacaagg
    12061 tgcaaagaaa caaagtagtt caagtaagtc aactcaaaag aataatcaaa ctagtaataa
    12121 gaattcaaaa acaacaaatg ctaaatcatc caatgcatca aaaacgccaa atgctaaagt
    12181 tgagaaagct aaaagtaaaa tagagaaacg tacattcaat gactaagatt actaaaatcg
    12241 ttgaataatc aatcatagca gtaagctatg taatatattt ttaaaaattg aatttcaaaa
    12301 taaaaggtag gcattcaggt gcttaccttt tttgatatca tcagtttatt ttgaaaggca
    12361 atgcgatcat ttcatgtatt tatgttgttt gaaacatcgt tagataacaa tagtgatatt
    12421 gcacatttta agctgaagat ggaaaaatat tcgataatca aataaacaat gaattttaga
    12481 aggtacaatg acgttcacta atttaaatat agctgaatgt gttggtgagt gatgttcact
    12541 atagatttat attaatatac aaagacaaag gttgttaatt tttattaagc gttaggttga
    12601 atgtatgaga attttagatt tataatagaa gatagaaacg aaaatttttc ttaaaagcag
    12661 taatgttgac tcaaaataag ctataataat gacacttatt taattgatta acatttgcta
    12721 ataaatatca atatagaata taactttcta ataatgactg agaaaatcga aatgtcagtc
    12781 tcgaatcata taattagaaa attgattatt ttctgtcaat ttagggttga actatacata
    12841 tgatattgtt agaatatttt ttaacattat attttattgc tttaaagtgg aatatacttg
    12901 aaataattag tagaggtgag taaggatgag taataaatta gaatcataca gaagtgagat
    12961 tgtatcactg aatcatcaaa ttttagactt attatctaaa cgtggtgaac tagcacaaaa
    13021 aattggggaa gaaaaattaa aacaaggtac acgtatttat gatccacaac gtgaaaaaga
    13081 aatgcttaac gacttaatcg atagtaacaa aggaccattc aacgataata ctattaagca
    13141 attatttaaa gaaattttca aagcctctac agatttacaa aaatctgaaa atgaaaaaca
    13201 tttatatgta tcacgtaagt tgaaacctga agatacgatt gtaacatttg ataatggggg
    13261 cattattgga gacggcaata aatcatttgt atttgggcca tgttcagttg aatcatttga
    13321 acaagttgaa gctgttgcta aaaacttaca tgctaaaggt gaaaaattta ttcgtggcgg
    13381 tgcatttaaa ccacgtacat caccatatga tttccaaggc ctaggtgttg aaggacttaa
    13441 aatacttaaa cagattaaag ataaatatga tttaaatgtt gtcagcgaaa tcgtaaatcc
    13501 aaatgatttt gaagtggctg atgagtattt agacgtattc caaattggtg cacgtaatat
    13561 gcaaaacttc gagttattaa aagaagctgg ccgtacgaaa aagcctattc tattaaaacg
    13621 tggtttatct gctacaatcg aagagtttgt ttatgcagct gaatacattg cttcacaagg
    13681 taatcaaaac attattttat gtgaacgtgg aatccgaact tatgaaaagg cgacacgtaa
    13741 cactttagat atttcagcag taccaatttt aaaacaaggt acacacttac cagtcatggt
    13801 agatgttacg catagtacag gtcgtaaaga tatcatgtta ccaactgcga aagcagcatt
    13861 agcagttggt gctgatggag ttatggctga ggtgcatcca gatccatctg ttgcacttag
    13921 tgatgcgggt caacaaatgg atttagatga attccaagca ttttatgatg aattaaagcc
    13981 tttagctgat ttatataacg ctaaaaagtt aaaataatat tccaaggaaa ctatagacta
    14041 cttaactaat atgtcatgtt gaagtagaat attatctttg aatcgacaat tttaaactta
    14101 cagccattct aagagtatat tacttttaga gtggctatta ttttttgtat agaaataaag
    14161 gtatactgca cttaacgatt gttataatac ttcgacactt gttcaatttc acaattatta
    14221 aagattatga ctgatagcag taattaaaat tataactatg aattatctgt aaaatataat
    14281 agattcacac atttgttgct gaaatgtgaa catttttcaa caaatgcaat tgatatttga
    14341 aaaggctttc tcaaaacatt acaattaaaa atgaaaaaag tttatata
//
LOCUS       DALPQQ010000065        13715 bp    DNA     linear   BCT 22-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus strain K18-6-464
            SAMD00233528-rid16434743.denovo.065, whole genome shotgun sequence.
ACCESSION   DALPQQ010000065 DALPQQ010000000
VERSION     DALPQQ010000065.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMD00233528
            Sequence Read Archive: DRR236061
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 13715)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13715)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001543423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001543423.1
            Genome Coverage       :: 77x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/22/2022 17:09:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,811
            CDSs (total)                      :: 2,743
            Genes (coding)                    :: 2,689
            CDSs (with protein)               :: 2,689
            Genes (RNA)                       :: 68
            rRNAs                             :: 2, 4, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 4, 2 (16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 54
            CDSs (without protein)            :: 54
            Pseudo Genes (ambiguous residues) :: 0 of 54
            Pseudo Genes (frameshifted)       :: 27 of 54
            Pseudo Genes (incomplete)         :: 27 of 54
            Pseudo Genes (internal stop)      :: 10 of 54
            Pseudo Genes (multiple problems)  :: 10 of 54
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13715
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMD00233528-rid16434743.denovo.065"
                     /strain="K18-6-464"
                     /db_xref="taxon:1280"
                     /geo_loc_name="Japan: Niigata"
     gene            67..636
                     /gene="ahpC"
                     /locus_tag="O7798_001582"
     CDS             67..636
                     /gene="ahpC"
                     /locus_tag="O7798_001582"
                     /EC_number="1.11.1.24"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002445177.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peroxiredoxin"
                     /protein_id="HDC2863844.1"
                     /translation="MSLINKEILPFTAQAFDPKKDQFKEVTQEDLKGSWSVVCFYPAD
                     FSFVCPTELEDLQNQYEELQKLGVNVFSVSTDTHFVHKAWHDHSDAISKITYTMIGDP
                     SQTITRNFDVLDEATGLAQRGTFIIDPDGVVQASEINADGIGRDASTLAHKIKAAQYV
                     RKNPGEVCPAKWEEGAKTLQPGLDLVGKI"
     gene            652..2175
                     /gene="ahpF"
                     /locus_tag="O7798_001583"
     CDS             652..2175
                     /gene="ahpF"
                     /locus_tag="O7798_001583"
                     /EC_number="1.8.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498953.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alkyl hydroperoxide reductase subunit F"
                     /protein_id="HDC2863845.1"
                     /translation="MLNADLKQQLKQLLELMEGNVEFVASLGSDDKSKELKDLLTEIT
                     DMSPRLSLSEKSLKRTPSFSVNRPGEETGVTFAGIPLGHEFNSLVLAILQVSGRAPKE
                     KQSIIDQIKKLEGSFHFETFISLTCQKCPDVVQALNLMSVINPNITHSMIDGAVFREE
                     SENIMAVPAVFLNGEEFGNGRMTIQDILSKLGSTADASEFENKEPYDVLIVGGGPASG
                     SAAIYTARKGLRTGIVADRIGGQVNDTAGIENFITVKETTGSEFSSNLAAHIDQYDID
                     AMTGIRATDIEKTDEAIKVTLENGAVLESKTVIIATGAGWRKLNIPGEEQLINKGVAF
                     CPHCDGPLFENKDVAVIGGGNSGVEAAIDLAGIVNHVTLFEFASELKADNVLQDRLRS
                     LSNVDIKTNAKTTEVVGEDHVTGIRYEDMNTGEEHLLNLDGIFVQIGLLPNTSWLNDA
                     VELNERGEIVIDRNNNTNVPGIFAAGDVTDQKNKQIIISMGAGANAALNAFDYIIRN"
     gene            2305..2547
                     /locus_tag="O7798_001584"
                     /pseudo
     CDS             2305..2547
                     /locus_tag="O7798_001584"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000887771.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            2620..3246
                     /locus_tag="O7798_001585"
     CDS             2620..3246
                     /locus_tag="O7798_001585"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498951.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NDxxF motif lipoprotein"
                     /protein_id="HDC2863846.1"
                     /translation="MKKRLLLSTFLASTLILTGCASDQSDNEDHHTSTGIHAPKSAKK
                     LETKDIFNSDKKNSDISDAEMKQAIEKYLSVNSDILDNKYIMQHKLDKQIDSQTKVTE
                     KQAETLSHLSNLAVKNDLHFKKFVTENNIPKEYKKPVELMMNYFKALNSTIANVDEDI
                     EKLSYQPQNKINVVDVPTKYAGDVNKKQQDKIKDFLKSKGIKSDVIDK"
     gene            3501..3884
                     /locus_tag="O7798_001586"
     CDS             3501..3884
                     /locus_tag="O7798_001586"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498950.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDC2863847.1"
                     /translation="MKVRITFIILAILSTIVCLFLAAMHPTGPNTVTFEQPYLFTLNI
                     IIMVLVALPSLVLAIYDYMSFRISSAILQFLGAISWFFLSLILSLTQFTPFTLASFIT
                     SIILFTSTIITLAIGGKSVEKNDSP"
     gene            complement(3950..4531)
                     /locus_tag="O7798_001587"
     CDS             complement(3950..4531)
                     /locus_tag="O7798_001587"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498949.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidine phosphatase family protein"
                     /protein_id="HDC2863848.1"
                     /translation="MTIYLVRHGESKSNYDNKHFRSYFCGQLDVPLTDTGTKSADDLC
                     DYFKEKQIKHVYVSDLLRTQQTFEHIFPYDIASTTTPLLRERSLGVFEGEYKDEISAN
                     PKYEKYFNDPNFKDFRHSFSQKAPEGESYEDVYQRVEHFMNHVVNEDTQKDDIVIVAH
                     QVVIRCLMVYFNKVSRAEAVDLKVENCKPYIIE"
     gene            4709..4918
                     /locus_tag="O7798_001588"
     CDS             4709..4918
                     /locus_tag="O7798_001588"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498948.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDC2863849.1"
                     /translation="MTTQSFIFMNIILLDGATQRHPFFICQILAFLFPKFPHINLLLF
                     NPILSTFSNIIIHIDHFHANKKDDN"
     gene            complement(4957..5208)
                     /locus_tag="O7798_001589"
     CDS             complement(4957..5208)
                     /locus_tag="O7798_001589"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498947.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GlsB/YeaQ/YmgE family stress response membrane
                     protein"
                     /protein_id="HDC2863850.1"
                     /translation="MFGFIGMLIVGGLIGWAAGAIMGKDIPGGILGNIIAGIIGSWVG
                     GKLFGQWGPELGSIYILPALIGSIILIAIVTLILRAMRK"
     gene            5508..5771
                     /locus_tag="O7798_001590"
     CDS             5508..5771
                     /locus_tag="O7798_001590"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498946.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HDC2863851.1"
                     /translation="MNMHILYNLRTKHNLEIDELAQQLNEKYGTKYEAHQIWEWENHH
                     HEPKFKDAMHLADFFDAPYEMFLESKVKEYQKHLEEVDIRMDK"
     gene            complement(5909..6481)
                     /locus_tag="O7798_001591"
     CDS             complement(5909..6481)
                     /locus_tag="O7798_001591"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498945.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PepSY domain-containing protein"
                     /protein_id="HDC2863852.1"
                     /translation="MKLKSLAVLSMSAVVLTACGNDTPKDETKSTESNTNQDTNTTKD
                     VIALKDVKTSPEDAVKKAEETYKGQKLKGISFENSNGEWAYKVTQQKSGEESEVLVAD
                     KNKKVINKKTEKEDTMNENDNFKYSDAIDYKKAIKEGQKEFDGDIKEWSLEKDDGKLV
                     YNIDLKKGNKKQEVTVDAKNGKVLKSEQDH"
     gene            complement(6662..7030)
                     /locus_tag="O7798_001592"
     CDS             complement(6662..7030)
                     /locus_tag="O7798_001592"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498944.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YxeA family protein"
                     /protein_id="HDC2863853.1"
                     /translation="MKTILKTITYLVLTIIGAYAALFILKTIDSHGITDQFNPLVKKD
                     DSYVKTTEVSTRMDDQLRSYSQSVFNKEGKETQLMYTATFDVKPHRYLKITHKGHHVE
                     TFEEVEKEEVPKKALDKLSR"
     gene            complement(7399..8010)
                     /locus_tag="O7798_001593"
     CDS             complement(7399..8010)
                     /locus_tag="O7798_001593"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498943.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="toxin"
                     /protein_id="HDC2863854.1"
                     /translation="MFKKYDSKNSIVLKSILSLGIIYGGTFGIYPKADASTQNSSSVQ
                     DKQLQKVEEVPNNSEKALVKKLYDRYSKDTINGKSNKSRNWVYSERPLNENQVRIHLE
                     GTYTVAGRVYTPKRNITLNKEVVTLKELDHIIRFAHISYGLYMGEHLPKGNIVINTKD
                     GGKYTLESHKELQKDRENVKINTADIKNVTFKLVKSVNDIEQV"
     gene            8210..8917
                     /locus_tag="O7798_001594"
                     /pseudo
     CDS             8210..8917
                     /locus_tag="O7798_001594"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002505297.1"
                     /note="frameshifted; incomplete; partial in the middle of
                     a contig; missing N-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine-type recombinase/integrase"
     gene            8956..9893
                     /locus_tag="O7798_001595"
                     /pseudo
     CDS             8956..9893
                     /locus_tag="O7798_001595"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498940.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="Abi family protein"
     gene            complement(11032..11217)
                     /locus_tag="O7798_001596"
     CDS             complement(11032..11217)
                     /locus_tag="O7798_001596"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499823.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDC2863855.1"
                     /translation="MSDYKLKIIELIKSDITGYQIHKQTGVAQYVISQLRQGKREVDN
                     LTLNTTEKLYSYARQVL"
     gene            complement(11219..11329)
                     /locus_tag="O7798_001597"
     CDS             complement(11219..11329)
                     /locus_tag="O7798_001597"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500514.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDC2863856.1"
                     /translation="MTEQMYLILFLLSLPLLLFIGRKTHFYCLDKKNGRR"
     gene            complement(11400..11552)
                     /locus_tag="O7798_001598"
     CDS             complement(11400..11552)
                     /locus_tag="O7798_001598"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500515.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDC2863857.1"
                     /translation="MRKEVKSLMLDIIKTLLEHQVLAVLIIPEVLKQLREWHLGYLDR
                     KPNNKD"
     gene            complement(12400..13368)
                     /locus_tag="O7798_001599"
     CDS             complement(12400..13368)
                     /locus_tag="O7798_001599"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000801982.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Abi family protein"
                     /protein_id="HDC2863858.1"
                     /translation="MKPFESHNKQLKILRRRGMEVPSSAKRDLENENYYNIINGYKDL
                     FLELDVNGNFLVPDKYKQGTHFKEVFSLYKLDRKFRNVLLEYLLVFETHIKSRISYYF
                     SEKYREPHSYLYFKNYSSDTSKTDSIVKMVATFSSVMSNRKNKPLKHYINTHNGVPLW
                     ILVNYLTLGNVSKMYSNLDDDLRLEVAKDYKRKLERDYKTRVQITPSDVDSILQQAHM
                     FRNVCAHEERLYDYKIDRAKSRANIFANYNKIYDKEYVPTMNGSYVFDLLISLCLFLN
                     KHDYIKLMKNMDKLISNYSHSFYTITIDDLYTKMNFPDQTKILDML"
     gene            complement(13645..>13715)
                     /locus_tag="O7798_001600"
     CDS             complement(13645..>13715)
                     /locus_tag="O7798_001600"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500733.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="terminase small subunit"
                     /protein_id="HDC2863859.1"
                     /translation="VRDVSNANPNHTVIVDDIPLED"
BASE COUNT         4690 a         2307 c         1991 g         4727 t
ORIGIN      
        1 attataatta agcgcaatca attgatagtt ctaattcata cttaaattct taggaggaag
       61 atatttatgt cattaattaa caaagaaatc ttaccattta cagcgcaagc tttcgatcca
      121 aaaaaagatc aatttaaaga agttacacaa gaagatttaa aaggttcttg gagcgtagta
      181 tgcttctatc ctgctgactt ctcattcgtt tgtccaactg aattagaaga cttacaaaac
      241 caatatgaag aattacaaaa attaggcgta aatgtattct cagtatcaac tgatactcac
      301 ttcgtacaca aagcatggca tgaccattca gatgcaatta gcaaaatcac ttacactatg
      361 attggtgacc catcacaaac aatcactcgt aattttgatg tattagatga agctactggt
      421 ttagctcaac gtggtacatt cattatcgac ccagacggtg ttgtacaagc atctgaaatt
      481 aacgctgacg gaattggccg tgacgctagt acattagctc acaaaatcaa agcagctcaa
      541 tatgttcgta aaaaccctgg cgaagtatgc ccagctaaat gggaagaagg cgctaaaaca
      601 ttgcaacctg gtttagattt agtaggtaaa atctaaggag gcattacaac catgcttaat
      661 gctgatttaa aacaacaact taaacaacta ttagaactaa tggagggcaa cgttgaattc
      721 gttgccagcc ttggttcaga tgataaatcc aaagaactta aagatttgtt gacagaaatt
      781 actgatatgt cacctagact atctctttct gaaaaatctt taaaacgtac accaagtttc
      841 tcagtcaatc gtcctggcga agaaacaggt gtaacatttg caggtattcc attaggtcac
      901 gagtttaact cacttgtttt agcaatttta caggttagtg gtcgtgcacc taaagaaaaa
      961 cagtcaatca ttgaccaaat taaaaaatta gaaggttcat tccattttga aacattcatt
     1021 agtttaacgt gtcaaaaatg tcctgatgtc gttcaagcac ttaacttaat gagtgtgatc
     1081 aaccctaaca tcacgcattc tatgattgat ggtgcagtgt tccgtgaaga atctgaaaac
     1141 atcatggcag tccctgctgt ctttttaaat ggcgaagaat ttggcaatgg tcgtatgaca
     1201 atccaagata ttctttcgaa actaggcagt acggcagatg catctgagtt tgaaaataaa
     1261 gaaccttatg atgtcttaat cgttggtggt ggtcctgcta gtggtagtgc agcgatttac
     1321 acagcacgta aaggtttacg tactggtata gttgctgatc gtatcggtgg ccaagttaat
     1381 gatactgctg gtattgagaa cttcattact gttaaagaaa caactggttc tgaattttct
     1441 tctaacttag cagcgcacat tgatcaatat gacattgatg caatgacagg tatacgtgct
     1501 acagatatcg aaaagactga cgaagcaatt aaagttacgt tagaaaacgg tgctgtctta
     1561 gaaagtaaaa cagtcattat tgctactggt gcaggttggc gtaagctaaa cattccaggt
     1621 gaagagcaat tgattaataa aggtgttgca ttctgccctc actgtgacgg acctctattt
     1681 gaaaataaag acgtagcagt tatcggtggc ggtaactctg gggttgaagc agcaattgac
     1741 cttgctggta tcgttaatca tgttacatta ttcgaattcg ctagcgaatt aaaagcagac
     1801 aacgtgttac aagatcgttt acgttcttta tcaaatgttg atatcaaaac aaatgccaaa
     1861 actactgaag ttgtcggaga agaccatgtt acaggtatac gttacgaaga catgaacacc
     1921 ggcgaagaac atctacttaa cttagatggt atctttgttc aaattggttt acttccaaac
     1981 acatcatggt taaacgatgc tgttgaatta aacgaacgtg gtgaaattgt gattgatcgt
     2041 aacaataata cgaatgttcc tggaatattt gctgctggcg atgtcacaga tcagaagaac
     2101 aaacaaatta tcatttcaat gggcgctggt gcaaatgcag cattaaatgc ctttgactat
     2161 attatcagaa actaaagttt cattcatttc actgacagta tcttacattt gttaagatgc
     2221 tgttattttt ttatcccgac ataaaatcat gttatgataa acttaatata tacaacgaga
     2281 tgtgcgataa tgcttaaagt atgtacctct cgcaaacaaa tcaatatgaa aaatgatatt
     2341 gagaaagaaa agtatgtgaa cgaaattatt atgcttttac gtacgatacc tacgtctaaa
     2401 ttagtacaac caattatgca gttatttata gataaagcta tccttaacaa cgtccaaaat
     2461 gatgcattat tgatagaaaa agcaactcat gcacgtaatc atttacgtct atggtcattg
     2521 caaggtcatc gtgacattcc aaactaattc aatgttactc tattaaacat gaatacatat
     2581 tttttcaatt aaagataaac taaggagtta tattacatta tgaaaaagag attactacta
     2641 agtacatttt tagcatcgac attaattctt acaggttgcg cgtccgatca atctgataac
     2701 gaagatcatc atacaagtac tggcatccat gcacctaaaa gcgctaaaaa attagaaaca
     2761 aaagatatct ttaactcaga taagaaaaat agtgatatta gtgatgcaga gatgaagcaa
     2821 gctatagaaa agtatttgtc tgtaaatagc gatatacttg ataacaaata tattatgcaa
     2881 cataaactag ataaacaaat tgacagtcaa acaaaagtga ctgaaaaaca agcagaaaca
     2941 cttagccact tatctaactt agctgttaaa aacgatttgc atttcaagaa atttgtcact
     3001 gaaaacaata ttcctaaaga atataagaaa cccgttgaat taatgatgaa ttacttcaaa
     3061 gctttaaata gtacaatcgc caatgttgat gaagatattg aaaagcttag ctatcaaccg
     3121 caaaataaaa tcaatgttgt cgacgtgcca acaaaatatg ccggtgatgt taataaaaag
     3181 caacaagata aaattaaaga tttcttaaaa tctaaaggta tcaagagtga tgttatcgat
     3241 aaataactga aagccatcat tgcgaaatgt aacacatcat tacatgagtt ttaattcatg
     3301 acaattcttt atctttaaaa gtgactaatc aatttagcta aagtcatcat ttgggcatca
     3361 agcagcatat tactgtttga tgccttttta attgccttaa attctctatc tatgccaaaa
     3421 ttcccattag ttgacgcatt tgactatata cctaacatat tccatactta tattgactct
     3481 ataaacaaag gatgatcatg atgaaagttc gaattacttt tattatttta gcaattttat
     3541 cgacgattgt ttgcttgttc ttagcagcaa tgcatccaac aggaccaaac acagtaactt
     3601 ttgaacagcc atatttattc accctcaaca tcattataat ggtattagtc gcattacctt
     3661 cacttgtttt agctatatat gattatatga gttttagaat ttcttctgct attttacaat
     3721 ttctaggggc tatctcttgg ttctttttat cattgatatt atcgctcaca caatttacac
     3781 cttttacatt agcgtcattt ataacttcaa ttattttgtt cacaagcaca attatcacat
     3841 tagccattgg tggtaagtct gttgaaaaga atgattcccc ttaaattcca aatgaaaaaa
     3901 aggttctgaa ggccgctata aaacacagtt tttcagaacc tctatacttc tattcaatga
     3961 tatatggttt gcaattttct acctttaaat ccacagcttc tgcccttgaa actttgttaa
     4021 aataaaccat caaacaacga atgacaactt gatgtgcaac aatgacaata tcatcttttt
     4081 gtgtatcttc attgacaaca tgattcataa aatgttctac gcgttgatat acatcttcat
     4141 aactttctcc ttcaggcgct ttttgtgaaa aactatgacg aaagtcttta aagtttggat
     4201 cattgaaata tttttcatat ttcggattcg cactgatttc atctttatat tcaccctcaa
     4261 atacgccaag tgaacgttct cttaatagag gggtagtcgt tgatgcaatg tcatatggaa
     4321 aaatatgttc aaacgtttgc tgtgttctta ataagtctga aacatataca tgtttaatct
     4381 gtttctcttt aaaataatca cataaatcgt ctgcactttt tgtgccagta tccgttaacg
     4441 gcacatctaa ttgtccacaa aaataagatc gaaaatgttt attatcataa ttcgattttg
     4501 attcgccatg tctaactaaa taaatcgtca taatattact ccttacctta tgtatttcat
     4561 atctaccata acactttgac tactaattcg atatcaatct taatattcta ttctaaaaaa
     4621 agaattaatt catattttaa attaatgact ctaaaaatag tattgtcttt aatcaagtga
     4681 tgtgttacta tatgggtgta gttcttaaat gactacacag tcttttatat tcatgaacat
     4741 aatactcctg gatggcgcaa cccaacgtca tccttttttt atttgtcaaa tactcgcttt
     4801 tttatttcca aaatttcctc atattaattt attacttttt aatcctatct tatctacatt
     4861 ttcaaatatt ataatacata ttgaccattt tcacgcaaat aaaaaagatg acaactgaat
     4921 gccatcttta tttcaatttc caattgaatt tttttattat ttacgcatag ctcttaaaat
     4981 taacgttacg attgcaatta agataattga accaattaat gctggcaaga tgtaaatact
     5041 tcctaattca ggaccccatt gtccgaatag tttgccacct acccatgatc caataatacc
     5101 tgcgataata ttgcctaaaa taccacctgg gatatcttta cccataatag caccagcagc
     5161 ccatccaatt aagccaccga caattaacat tccaataaat ccaaacataa ttttcagtct
     5221 cctttttcta tttattttgc gttattctaa gtagtacccc ttatttacaa ttctaaaaca
     5281 aattcaaatt atttttatcc aaatattttt aaaagtagta attgaatatc aattttattc
     5341 aatgtagcta tcgttattta aagtctctgt accgataata tcatatacat ttacattatt
     5401 ttttctgccg aattcatagc ttgattattt tatgttatag gactagaata tacacatatt
     5461 attagagcat ctttgaattt taaatcaaga agcgaggtta atgaacaatg aatatgcata
     5521 ttttatataa cttacgaact aaacataatt tagaaattga cgaattagca cagcaattaa
     5581 atgagaaata tggtactaaa tatgaagcac atcaaatttg ggaatgggag aatcatcacc
     5641 atgaacctaa atttaaagat gccatgcatt tagctgactt ctttgatgca ccatatgaaa
     5701 tgtttttaga aagtaaggtt aaagaatatc agaaacattt agaagaagtc gatattcgca
     5761 tggataaata gatgcaaata aaccctcaca acacgtttgg catatatcct ttcaaatcta
     5821 tactggatat attacattac gttgtgaggg tattttatta attaatatga attaagacat
     5881 tttacaagcg ttaatgcaac gaatcttttt agtgatcttg ctcactcttt aatactttac
     5941 cgttcttagc atcaacagta acttcttgtt ttttattacc ttttttcaaa tcgatattgt
     6001 aaacaagttt gccatcatct ttttcaagtg accattcttt aatatcacca tcaaattctt
     6061 tttgtccttc tttaatggct tttttgtaat ctatagcatc gctatattta aagttatcat
     6121 tttcattcat tgtatcttct ttttcagtct ttttgttaat cactttttta tttttatcag
     6181 caacaagtac ttctgactct tcaccagatt tttgttgcgt cactttataa gcccattcac
     6241 cattagaatt ttcaaatgaa attcctttca acttttggcc tttgtaagtt tcttcagctt
     6301 ttttcacagc atcttctggg cttgttttaa catcttttaa agcaataaca tcttttgttg
     6361 tattagtgtc ttgattagta tttgactctg ttgattttgt ttcatctttt ggagtatcat
     6421 tgccacatgc agtaagcacc accgctgaca ttgataacac tgctaatgat tttaatttca
     6481 taatatcact ctctcttcct atttttgaaa ctcataacaa aagcttatat gctatataga
     6541 ttgtattacc ccttgttttt aattttattc ataattatta caaatatttt taaattaatc
     6601 gtcatgcgtt actttcgttc gtactccttt tataaatgaa ccatgtaata taagcatgct
     6661 attatcgact cagtttgtct aatgctttct ttggtacttc ttccttttca acttcttcaa
     6721 aagtttctac atgatgacct ttatgtgtaa ttttcaagta tctatgcggt ttaacatcaa
     6781 atgtagcagt atacattaat tgcgtctctt tcccttcttt attaaaaaca ctttgactat
     6841 aacttcggag ttgatcatcc attctagtag acacctctgt cgttttaaca taagaatcat
     6901 ccttctttac taatgggtta aattgatctg ttataccatg ggagtctatt gtttttaaaa
     6961 tgaataaagc agcataagcg ccaatgatag taagtacaag atatgttatt gtttttaaaa
     7021 tcgttttcaa aagatcacct ctgacaaaat ataaaatagg atgtatctga aaacaactta
     7081 cataattgta attaaagtgt aagtattagg agaaaatgat ggtatttgaa tctgaaagat
     7141 acgaatcgtt tttaaactaa gttattttat agagacttta ttatgaaatt gaaagaagtt
     7201 aattttaagg ttgtcgaatg taaaaacata ttgattaacc ataaaagaga aattattttt
     7261 gtagatttcg gcataaacgt cattaaagaa ttttctatat gatggtgcta atcataacaa
     7321 agaaagctag gcacctttag atacctaact ttcaaagtat tagcgataaa acactatata
     7381 tactaattta gcttaatttc aaacttgttc aatgtcatta acacttttca caagtttgaa
     7441 agttacattt tttatatcgg ctgtattaat ttttacattt tccctatctt tttgtagctc
     7501 tttatgcgac tctaatgtat atttaccacc atcttttgta tttatgacga tgttaccttt
     7561 aggcaaatgt tctcccatat acaagccata ggaaatatga gcaaatctta tgatatgatc
     7621 caattctttt aaagtgacaa cttctttatt aagagtaata ttcctcttag gtgtatacac
     7681 tctgccagca actgtgtatg ttccttctaa atgtatacga acttggtttt catttaaagg
     7741 tctctctgaa taaacccaat tcctagattt attagatttt ccatttattg tatccttgct
     7801 gtatctatcg taaagttttt taaccaaagc tttttctgaa ttatttggta cttcttcaac
     7861 tttttgtaat tgtttatctt gtacacttga ggaattttgt gttgacgcgt ctgcttttgg
     7921 atatattcca aatgttcccc catagatgat acctagcgat agaatagatt ttaatacgat
     7981 tgaatttttt gagtcatatt ttttgaacat atttaattac ctccttgatg taaagcttta
     8041 tttgctacaa ttataaaaat aatagacgtg ttcatgaatt aaattcatct taactcttga
     8101 ttaactttaa tttgctacca ctctgaattt aataactata aatcgtctac acataattgg
     8161 acaaaatcta agagaataaa atttgttaat ttaaaatagc aagcaattca aagttatatg
     8221 tgtaatagat aaaatagata tccctatagt gatgcgttac tagctaaaca taataacaca
     8281 ttagaagata atgaagttaa ggagttactg gattgtttcg actatgtaat taagtataaa
     8341 aatatccaac gacaaaacgt aattataaaa tggtaaaagc tatggtacag tttcaaattg
     8401 ctaatgacat gcgtatcggt gagctacttg caataaagag agtaaatata aactatgaag
     8461 ataaaacgct agatatcgac ggtaaagtta attggataac tgaaaaaaga cgggagcatt
     8521 cggagtaaag gagacaactg aaagaagtaa tagctataag gccacagggc tcactaccca
     8581 aagcatcgac ttactaagaa cacttatgct tggaatgata agtttattga tagagagtac
     8641 atattcacaa atacgtctgg tagccctatc gactcgaaca aaattagcca cattattaaa
     8701 ggggggcgct gatattagtt ctattaagaa acctataacg acgcatacat tacatcattc
     8761 gcatatatct acacttgctc aattaggaat taacttaaaa gcaatgcaag agcatgtagg
     8821 tcattcagat tataaaaaaa atctagagat atacacacat gttactaatc agatggcgaa
     8881 agatatgatg aataaatttg aacgattggg gagttaaaat tggaaaaaga tgatacacta
     8941 gcagaaatta agcctatgct caattttgat gagcaaatag cgaaattaaa acagatgaat
     9001 atatttttta atattattga caccgaaaaa gcaaatgaaa ttcttagaaa aaataattac
     9061 ttcttcaaac tagcttattt ccgaaaaaat ttcgaaaaaa gaatggcggc tatttcatag
     9121 aatttgctta tttatcagat ttagcaacta tagatatgaa attaagatac acaatgttgc
     9181 atttaacttt agatattgaa catagtttaa agtatctagt cttaaaacta ataacagaaa
     9241 ataaccaaga agatggttat aaaataatag atgagttctt atgtattgat aaatcatata
     9301 gcaattcaaa ttttgacaca aattcaagaa caccagaaga agttatggaa accaaaatca
     9361 aaaataaaaa cgaaatattc aagcatatga ataaacgagg acaactaccc gagaagttga
     9421 ataaatacta tcaaaatcca cccgcatggg tttgcattga attcatgcaa ctaggtcaat
     9481 tcgtttcgtt tctcaacttc tattacaaga agtacaatga cgaagaattg agagttgcta
     9541 atattttaat gcctttagtt aaaaatataa gaaacaaatc agctcataac caacccatca
     9601 tagcaaatct aaattatgac agtagattac ctcaatattt atttgaaaaa gggaataata
     9661 taggcatatc tagaaacatg ttcggaataa aaaatttcat agatactttc gctacgctag
     9721 aattacataa tcaagtttgt agtaatgcaa ttatccaagc aagatatcac gatttggacc
     9781 aacttcaaaa gcgatataaa agaaacgaaa gctattataa taatgcatta gctatcaaaa
     9841 gattttttat agctttagat aaaattattg acttcaacag accaaaagta taaactatct
     9901 agtgaggaaa gagacttata ggtctcgcga gttattttaa ttcgtatgca agaaaaagaa
     9961 gagctatgca ttttatttaa aatgcgtagt tcttttttta tgcatctaaa ttcatattat
    10021 ttttgcaata taaacatatc tttgtgcaaa ttccgaacac aaaacattca catcatcctt
    10081 ttttgccctt tttctatacc ccaaaacaca aaaagccccg taagcctatg cctacggggt
    10141 ttgacaataa attatatatt attgttcttc ttttatatac tgctatttta tgaataatca
    10201 ctagtgttca aaatgctatt aaatcaatga tttatagtca taattttcat tttgaaagtc
    10261 tatgaacatg cacactattt cgtaactttg cgaacttttt gcgaacatac tacccccttg
    10321 cccctagttt cacaattacg cctttttttc gcctttataa taaccacact cctaaattaa
    10381 taggtggtgt ggtttgatca tttataatat aacataaaaa caaccaccca gtaactagta
    10441 tgagtggcgt agcgactata acaactctat gttatcaaga tatatgtata tgagtgatga
    10501 caaggaagat gtctcctgcg ggaccaacag tcagatatat ggcctctgcc gggctataca
    10561 attcactcct gattgtatat aactaaatta atagttactt gacgaactaa ctacgaaaga
    10621 atgcaagtta ggaagaaaga acggaataga gagttgactt tcttcatagt taactataat
    10681 atcttttaac tttatacgca atagatatga gtaaattttt catacttttt attagataga
    10741 gttagttttg gttaacttgc gttatatata aacaaccacc cagtaactag tatgggtggt
    10801 taagatgtgc ctttagcact taataaaacc gataatatgc tttattatgt cgcaaatatt
    10861 tcagcgactt gttatgcacc accacacaaa cttactccca tccaggaaca cagagctttg
    10921 tcgctcgtca gcaacgtcat atgaattctc agttcatgtt gtggtgacac tttaaacggt
    10981 ctgtgccagt agcgaccgag tcatttcaag aatgaccatt tcacatttat attataacac
    11041 ttgtcgtgcg taactgtata gtttttcagt tgtatttaaa gttaagttat ctacttcgcg
    11101 ctttccttgc cttaattgtg aaattacata ttgcgctacg ccagtttgtt tgtgaatttg
    11161 gtaacctgtt atatcacttt tgatcaattc aattattttt aatttataat cactcatatt
    11221 atctacgtcc attcttttta tctaaacaat aaaaatgtgt ttttctcccg ataaataata
    11281 acaatggtag gcttaataaa aacaatatta aatacatttg ttctgtcata attgaaaacc
    11341 tccaaataat attatattat ataagtgtaa ggaggagcca tcaggctcca agcataatgt
    11401 taatctttgt tgtttggctt tcggtctagg tagccgagat gccattctct aagttgtttt
    11461 aacacttctg gaattatcag tactgccaat acttgatgtt ctagaagtgt ttttattatg
    11521 tctagcatga ggcttttcac ctccttacgc ataatttgta agtcatcaac taacctacaa
    11581 atataattat actaaacaaa tgtttattaa gcgagtgttt ttttaaattt gcataaaaaa
    11641 taggcaagta ccgcagtacc tgcctgttat ctacatttaa atcttgagag aaatgttaaa
    11701 aagttctagt aaaataatag cacattttat ctttaaatgt aaatagaaag caggtgtgta
    11761 acgcacctgc ttaaatagac atgaatatgt cattctaact gatttctccc cataagtcac
    11821 ctaatacctg attaggtggg gcagaaccat tccatgttct aataggcaag taataacgtt
    11881 gcccctcccg tttatacaat acccataaat aacatctata taactaattt atgcaatttt
    11941 acaaggctca aaattgagct ctgccgttaa attcatagtc ttttcatctg gcgttttatt
    12001 ttcgccgttt gatgtaatgt gttctttggt gcattctggt tcaaaaagag ttgcttatta
    12061 gtataaaata cttgcgccca tatatcacac tggtgggaca tttaattctg gattttcagc
    12121 tattttcata aatctattag ctgataatta gcttaatcca atttttcaag ccatagccta
    12181 aattctccat gtaccaaatc attctcttta acatgtttca atcttcggcc aatctcaaag
    12241 atagattgac cagcgatgtt tgagattata tttcacgagg tcacatttac agttaaagtg
    12301 tatttgtgcg tggttcccat tcctcactgc aacacagggc gtttctcagc gtcttaaaat
    12361 aaaaaaacgc cactcgtaag tgacattaaa aaatatcttt tataacatat ccagtatttt
    12421 tgtttgatct ggaaaattca tttttgtata taggtcatct atagtaattg tatagaaaga
    12481 atgtgaataa ttacttatta gtttatccat atttttcatc aattttatgt aatcatgttt
    12541 attcaaaaat agacatagtg aaatcaacaa atcgaataca taactaccat tcattgtagg
    12601 aacgtattct ttatcgtata ttttgttata attggcgaat atattagctc tacttttagc
    12661 cctgtctatt ttataatcat acaatctttc ttcatgcgca cacacgttac gaaacatatg
    12721 tgcttgttgt agtatactgt ctacatctga tggagttatt tgaacacgtg ttttataatc
    12781 tctttccaat ttccttttat agtctttagc aacttccaat cgaagatcat catccaaatt
    12841 ggaatacatt tttgaaacat tacctaaagt taaataattc accaatatcc atagtggcac
    12901 tccattatga gtattaatat aatgttttaa tggtttattt tttctattac tcataaccga
    12961 gctaaatgta gcaaccattt tcacgatgct atctgtctta cttgtgtcag atgaataatt
    13021 tttaaagtat aaatatgaat gtggttctct atatttttcg ctaaaataat atgaaattct
    13081 tgatttaata tgagtttcaa atactaacaa atactctaat aaaacattcc taaattttct
    13141 atctagtttg tataaagaaa agacttcttt aaaatgagta ccttgcttat atttatcagg
    13201 aaccaaaaaa ttaccattaa catctagttc taaaaataaa tctttataac catttatgat
    13261 attataataa ttttcatttt ctaaatctct tttagcacta ctcggtactt ccattcctct
    13321 tcttcttaga attttcaatt gtttattatg actttcaaat ggcttcataa atttacccct
    13381 ataaaagtag ccataacccg aatagagtta tggctagatc gttatatata taatacattt
    13441 aattttatcg gttgtaaata aataagaaat aacaaaaaga gatattttac acaattacct
    13501 cctttatttt attgctactc ctcaaaccca ccaatattat caataaacac tggtgttgtt
    13561 acatttaagt ctactttctc agtaaataag ctatggtatc aaactaatta gtattaattt
    13621 ataaatagca tagcttcatt ttcttcaatc ctctaacgga atatcatcga caatcacagt
    13681 atgattagga ttagcgttag atacatctcg cactg
//
LOCUS       DALPQQ010000066        13292 bp    DNA     linear   BCT 22-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus strain K18-6-464
            SAMD00233528-rid16434743.denovo.066, whole genome shotgun sequence.
ACCESSION   DALPQQ010000066 DALPQQ010000000
VERSION     DALPQQ010000066.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMD00233528
            Sequence Read Archive: DRR236061
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 13292)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13292)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001543423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001543423.1
            Genome Coverage       :: 77x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/22/2022 17:09:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,811
            CDSs (total)                      :: 2,743
            Genes (coding)                    :: 2,689
            CDSs (with protein)               :: 2,689
            Genes (RNA)                       :: 68
            rRNAs                             :: 2, 4, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 4, 2 (16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 54
            CDSs (without protein)            :: 54
            Pseudo Genes (ambiguous residues) :: 0 of 54
            Pseudo Genes (frameshifted)       :: 27 of 54
            Pseudo Genes (incomplete)         :: 27 of 54
            Pseudo Genes (internal stop)      :: 10 of 54
            Pseudo Genes (multiple problems)  :: 10 of 54
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13292
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMD00233528-rid16434743.denovo.066"
                     /strain="K18-6-464"
                     /db_xref="taxon:1280"
                     /geo_loc_name="Japan: Niigata"
     gene            <1..334
                     /locus_tag="O7798_001601"
     CDS             <1..334
                     /locus_tag="O7798_001601"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500198.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="elongation factor 4"
                     /protein_id="HDC2863860.1"
                     /translation="NGDKVDALSFIVHRDFAYERGKALVEKLKTLIPRQQFEVPVQAA
                     IGQKIVARTNIKSMGKNVLAKCYGGDISRKRKLLEKQKAGKAKMKAVGNVEIPQDAFL
                     AVLKMDDE"
     gene            897..2021
                     /locus_tag="O7798_001602"
     CDS             897..2021
                     /locus_tag="O7798_001602"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500196.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="oxygen-independent coproporphyrinogen III
                     oxidase"
                     /protein_id="HDC2863861.1"
                     /translation="MTVQSAYIHIPFCVRICTYCDFNKYFIQNQPVDEYLDALITEMS
                     TAKYRILKTMYVGGGTPTALSINQLERLLKAIRDTFTITGEYTFEANPDELTKEKVQL
                     LEKYGVKRISMGVQTFKPELLSVLGRTHNTEDIYTSVLNAKNAGIKSISLDLMYHLPK
                     QTIEDFEQSLDLALDMDIQHISSYGLILEPKTQFYNMYRKGLLKLPNEDLGADMYQLL
                     MSKIEQSPFHQYEISNFALDGHESEHNKVYWFNEEYYGFGAGASGYVDGVRYTNINPV
                     NHYIKAINKESKAILVSNKPSLTERMEEEMFLGLRLNEGVSSSRFKKKFDQSIESVFG
                     QTINNLKEKELIVEKNDVIALTNRGKVIGNEVFEAFLIND"
     gene            2122..3099
                     /gene="hrcA"
                     /locus_tag="O7798_001603"
     CDS             2122..3099
                     /gene="hrcA"
                     /locus_tag="O7798_001603"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500195.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heat-inducible transcription repressor HrcA"
                     /protein_id="HDC2863862.1"
                     /translation="MITDRQLSILNAIVEDYVDFGQPVGSKTLIERHNLNVSPATIRN
                     EMKQLEDLNYIEKTHSSSGRSPSQLGFRYYVNRLLEQTSHQKTNKLRRLNQLLVENQY
                     DVSSALTYFADELSNISQYTTLVVHPNHKQDIINNVHLIRANPNLVIMVIVFSSGHVE
                     HVHLASDIPFNNDKLNTISNFVTNKLTEFNQNLQDDIVSFVQSEQEEIFINKLLNTMN
                     NHISNQSNSIYMGGKVKLIDALNESNVSSIQPILQYIESNRIAELLQDISSPNINVKI
                     GNEIDDSLSDISIVTSQYHFDETLKGQIAVIGPTAMHYQNVIQLLNRIW"
     gene            3131..3757
                     /gene="grpE"
                     /locus_tag="O7798_001604"
     CDS             3131..3757
                     /gene="grpE"
                     /locus_tag="O7798_001604"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500194.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleotide exchange factor GrpE"
                     /protein_id="HDC2863863.1"
                     /translation="MTNKDESVEKNTESTVEETNVKQNIDDSVEQAEESKGHLQDEAI
                     EETSDENVIEEIDPKDQKNNELQQLADENEEKYLRLYAEFENYKRRIQKENEINKTYQ
                     AQRVLTDILPAIDNIERALQIEGDDETFKSLQKGVQMVHESLINALKDNGLEVIKTEG
                     EAFDPNIHQAVVQDDNPDFESGEITQELQKGYKLKDRVLRPSMVKVNQ"
     gene            3826..5658
                     /gene="dnaK"
                     /locus_tag="O7798_001605"
     CDS             3826..5658
                     /gene="dnaK"
                     /locus_tag="O7798_001605"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500193.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molecular chaperone DnaK"
                     /protein_id="HDC2863864.1"
                     /translation="MSKIIGIDLGTTNSCVTVLEGDEPKVIQNPEGSRTTPSVVAFKN
                     GETQVGEVAKRQAITNPNTVQSIKRHMGTDYKVDIEGKSYTPQEISAMILQNLKNTAE
                     SYLGEKVDKAVITVPAYFNDAERQATKDAGKIAGLEVERIINEPTAAALAYGLDKTDK
                     DEKVLVFDLGGGTFDVSILELGDGVFEVLSTAGDNKLGGDDFDQVIIDYLVAEFKKEN
                     GVDLSQDKMALQRLKDAAEKAKKDLSGVSQTQISLPFISAGENGPLHLEVNLTRSKFE
                     ELSDSLIRRTMEPTRQAMKDAGLTNSDIDEVILVGGSTRIPAVQEAVKKEIGKEPNKG
                     VNPDEVVAMGAAIQGGVITGDVKDVVLLDVTPLSLGIEILGGRMNTLIERNTTIPTSK
                     SQIYSTAVDNQPSVDVHVLQGERPMAADNKTLGRFQLTDIPPAERGKPQIEVTFDIDK
                     NGIVNVTAKDLGTNKEQRITIQSSSSLSDEEIDRMVKDAEVNAEADKKRREEVDLRNE
                     ADSLVFQVEKTLTDLGENIGEEDKKSAEEKKDALKTALEGQDIEDIKSKKEELEKVIQ
                     ELSAKVYEQAAQQQQQAQGANAGQNNDSTVEDAEFKEVKDDDKK"
     gene            5794..6933
                     /gene="dnaJ"
                     /locus_tag="O7798_001606"
     CDS             5794..6933
                     /gene="dnaJ"
                     /locus_tag="O7798_001606"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500192.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molecular chaperone DnaJ"
                     /protein_id="HDC2863865.1"
                     /translation="MAKRDYYEVLGISKDASKDEIKKAYRKLSKKYHPDINKEEGADE
                     KFKEISEAYEVLSDDNKRASYDQFGHDGPQGFGGQGFNGSDFGGFSGFGGGGFEDIFS
                     SFFGGGRQRDPNAPQKGDDLQYTMTLTFEEAVFGTTKEISIRKDVTCETCHGDGAKPG
                     TSKKTCSYCNGAGHVAVEQNTILGRVRTEQVCPKCNGSGQEFEEACPTCHGKGTENKT
                     VKLEVKVPEGVDNEQQIRLAGEGSPGVNGGPAGDLYVVFRVKPSETFKRDGDDIYYKL
                     NVSFPQAALGDEIKIPTLNNEVMLTIPAGTQTGKQFRLKEKGIKNVHGYGYGDLYVDI
                     KVVTPTKLTDRQKELMKEFAQLNGEEINEQPSNFKDRAKRFFKGE"
     gene            6937..7875
                     /gene="prmA"
                     /locus_tag="O7798_001607"
     CDS             6937..7875
                     /gene="prmA"
                     /locus_tag="O7798_001607"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500191.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L11 methyltransferase"
                     /protein_id="HDC2863866.1"
                     /translation="MNWTELSIIINHEAVELATNILENHGSNGVVIEDSDDLINQPED
                     KYGEIYALKKEDYPDKGVRLKAYFNEMTYDDKLRQQIKDELLNLDELDQHNVQFSEQI
                     IAETDWENEWKNYFHPFRASKKFTIVPSWETYAKEADEELCIELDPGMAFGTGDHPTT
                     SMCLKAIETYVLPQHSVIDVGTGSGILSIASHLIGVKRIKALDIDEMAVSVAKENFRR
                     NHCETLIEAVPGNLLKDETEKFDIVIANILAHIIDEMIEDAYNTLNEGGYFITSGIIK
                     EKYEGIQSHMERVGFKIISEQHDNGWVCLVGQKVSE"
     gene            7877..8629
                     /locus_tag="O7798_001608"
     CDS             7877..8629
                     /locus_tag="O7798_001608"
                     /EC_number="2.1.1.193"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500190.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA (uracil(1498)-N(3))-methyltransferase"
                     /protein_id="HDC2863867.1"
                     /translation="MQRYFIDQNADVSQRFFITKKEDIHHITNVMRYDVGSKIILTFN
                     DQTVYLCEIADITSDKIEVDLKEKQNINTELPVDVTICSGLIKADKYEWLLQKATELG
                     ASSFIAVSMERSIVKLNEAKVAKKIERWQKIIKEAAEQSYRLVIPSIQFESNLKLICD
                     TIDNYDYILIAYEEEAKDGELSNFKQTLQQFNAQDKVLMIFGPEGGLSENEISLFSNT
                     STVVGLGPRILRAETAPLYALSAISYEKELMG"
     gene            8636..9982
                     /gene="mtaB"
                     /locus_tag="O7798_001609"
     CDS             8636..9982
                     /gene="mtaB"
                     /locus_tag="O7798_001609"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500189.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA
                     (N(6)-L-threonylcarbamoyladenosine(37)-C(2))-
                     methylthiotransferase MtaB"
                     /protein_id="HDC2863868.1"
                     /translation="MSTVAFHTLGCKVNHYETEAIWQLFKEANYERVDFEANADVFVI
                     NTCTVTNTGDKKSRQIIRRAIRQNPDAVICVTGCYAQTSSAEIMEIPGVDVVVGTQDR
                     HKLLGYIDEFRKERQPINGVGNIMKNRKYEELDVPYFTDRTRASLKIQEGCNNFCTFC
                     IIPWARGLMRSRDPEKVVEQATQLVNSGYKEIVLTGIHTGGYGQDLKDYNLAQLLRDL
                     ETINGLERIRISSIEASQLTDEVIDVLERSTKVVRHLHIPLQSGSDTVLKRMRRKYTM
                     DRFSERLTKLHKALPDLAVTSDVIVGFPGETEAEFQETYDFIVKHKFSELHVFPYSPR
                     IGTPAARMDDQIDEEIKNERVHKLITLSNQLGKLYASKFDQDVLEVIPEEQGDTEGTL
                     VGYADNYMKVQFEGDESLIGQIVKVKITQANYPLNEGQAIKVVDFATNKSDREVLV"
     gene            10275..10451
                     /locus_tag="O7798_001610"
     CDS             10275..10451
                     /locus_tag="O7798_001610"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016998564.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S21"
                     /protein_id="HDC2863869.1"
                     /translation="MSKTVVRKNESLEDALRRFKRSVSKSGTIQEVRKREFYEKPSVK
                     RKKKSEAARKRKFK"
     gene            10695..11378
                     /locus_tag="O7798_001611"
     CDS             10695..11378
                     /locus_tag="O7798_001611"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500187.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine protease"
                     /protein_id="HDC2863870.1"
                     /translation="MTTILESMAGDTWVEQVSNIIVQPIFTLILTCLTFLGFVYQLYS
                     KKINAAGIIATLSLLILFLGFLIQGNVNMHSILIFSIGVILVVIELFVVGAVIGIIGM
                     ILITISITTLGDNLLFMLANVIVALILTIVEWVILVKIFNRKIPFLDKVILKDSTNSE
                     SGYNSHDNRSHLVGKTAQTVTDLRPAGIIFCENERIDAVSDGNFILRNKTVKILEVEG
                     TRVVVREVD"
     gene            11396..12385
                     /gene="floA"
                     /locus_tag="O7798_001612"
     CDS             11396..12385
                     /gene="floA"
                     /locus_tag="O7798_001612"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500186.1"
                     /note="flotillin-like protein involved in membrane lipid
                     rafts; Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flotillin-like protein FloA"
                     /protein_id="HDC2863871.1"
                     /translation="MFSLSFIVIAVIIVVALLILFSFVPIGLWISALAAGVHVGIGTL
                     VGMRLRRVSPRKVIAPLIKAHKAGLALTTNQLESHYLAGGNVDRVVDANIAAQRADID
                     LPFERAAAIDLAGRDVLEAVQMSVNPKVIETPFIAGVAMNGIEVKAKARITVRANIAR
                     LVGGAGEETIIARVGEGIVSTIGSSKHHTEVLENPDNISKTVLSKGLDSGTAFEILSI
                     DIADVDISKNIGADLQTEQALADKNIAQAKAEERRAMAVATEQEMKARVQEMHAKVVE
                     AESEVPLAMAEALRSGNISVKDYYNLKNIEADTGMRNAINKRTDQSDDESPEH"
     gene            12402..13100
                     /locus_tag="O7798_001613"
     CDS             12402..13100
                     /locus_tag="O7798_001613"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500185.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron transporter"
                     /protein_id="HDC2863872.1"
                     /translation="MSVGILIFVISVIISIITTMRENSHKDRQNQKPPQKTSTDNEPK
                     KGGFFEEIERTFKEISEELNEEEKKSSKRKYDDTLPPLFDELPKEEPKSKPVVEPMAP
                     KKQQETKPMTEKPITVPKAEPVEQKHRPSRQDNSDEIRRQLEKSLRDDIKTIRTDIDR
                     EKEKQIAKMEKRARDIIEDKYLSERTKRLKLKQLLNSQNVEKDLTKSAFQFDKDEVIN
                     GMIWSEILAKPKQL"
BASE COUNT         4999 a         1842 c         2552 g         3899 t
ORIGIN      
        1 aaatggtgat aaagtggatg cgctaagctt catagttcat agagattttg catatgaacg
       61 tggtaaagca ttagttgaaa aacttaaaac gttaattcca agacagcaat ttgaagtacc
      121 tgtacaggct gcaataggac aaaaaattgt agcgcgtaca aatattaaat caatgggtaa
      181 aaacgtttta gctaaatgtt atggcggtga cataagccgt aaacgtaaat tacttgaaaa
      241 acaaaaagca ggtaaagcta agatgaaagc agttggtaat gttgaaattc cacaagatgc
      301 tttcttggct gtattgaaaa tggatgatga ataattttaa aaaatcaatt aacaatttac
      361 aatgaataaa gtttaataac taaaaagagg gagcctagga taaattaacg tcctgggctt
      421 tacaatgtta tattggcagc catcgacaga gttaaaatga gcttataaca atggggcccc
      481 aacacagaag ctgacgaaaa gtcagcttac tataatgtgc aagttggggt ggggccccaa
      541 catagagaat ttcgaaaaga aattctacag gcaatgcaag ttggggtggg acgacgaaat
      601 aaattttgcg aaaatatcat ttctgtccca ctcccttatg catgagtttt actcatgtaa
      661 ttttattttt aaggacatat tacatctggc taatgtgtaa gagccactac ataataaatc
      721 attagtggtt ctttattatt tctatctcac tccctctaaa caagaataaa tattaaaatg
      781 aatcgatata ttagacaatc attgattaaa cgttaaagtt aaaagtaaga ataattgcag
      841 atagtccaac aggatatagc cgattggata aaaagtctga gaagcggggc attaaaatga
      901 cggtacaaag tgcatatata catattccat tttgtgtaag aatatgtaca tattgtgatt
      961 tcaataaata ttttatacag aatcaacctg tagatgagta cttagatgca ctaatcacag
     1021 aaatgtctac agcaaaatat aggatcttaa agaccatgta tgtaggtggc ggcacaccaa
     1081 cggccctttc tattaatcag ttggaaagat tacttaaagc aatacgtgat acgtttacaa
     1141 tcacaggtga gtatacattt gaagcaaatc ctgatgagtt aactaaagag aaagtccaac
     1201 tattagagaa atatggagta aaaaggattt caatgggcgt tcaaacattc aagccggagt
     1261 tattgtctgt tttaggtaga acgcacaata ctgaagatat ttacacttcg gtgttaaatg
     1321 ctaaaaacgc aggtattaaa tcaatcagtt tagatttaat gtatcattta ccgaaacaga
     1381 cgattgaaga ttttgaacaa agtttagatc tagctttaga tatggatatt caacatattt
     1441 cgagttacgg cttaatactt gaacctaaaa cccaatttta taatatgtat agaaaaggct
     1501 tgctcaaact tcctaatgag gatttaggtg ctgacatgta tcagttgctg atgtctaaga
     1561 tagaacaatc tcctttccat caatacgaaa tatctaattt tgcattagat ggccatgaat
     1621 cagaacataa taaggtttac tggtttaatg aggaatatta tggatttgga gcaggtgcaa
     1681 gtggttatgt agatggtgtg cgttatacga atatcaatcc agtgaatcat tatatcaaag
     1741 ctataaataa agaaagtaaa gcaattttag tatcaaataa accttctttg actgagagaa
     1801 tggaagaaga aatgtttctt gggttgcgtt taaatgaagg tgtgagtagt agtaggttca
     1861 aaaagaagtt tgaccaatct attgaaagtg tctttggtca aacaataaat aatttaaaag
     1921 agaaggaatt aattgtagaa aagaacgatg tgattgcact tacaaataga gggaaagtca
     1981 taggtaatga ggtttttgaa gctttcctaa taaatgatta aaaaaaattg aaatttcgag
     2041 tctttaacat tgacttactt tgaccaattt gataaattat aattagcact tgagataagt
     2101 gagtgctaat gaggtgaaaa catgattaca gataggcaat tgagtatatt aaacgcaatt
     2161 gttgaggatt atgttgattt tggacaaccc gttggttcta aaacactaat tgagcgacat
     2221 aacttgaatg ttagtcctgc tacaattaga aatgagatga aacagcttga agatttaaac
     2281 tatatcgaga agacacatag ttcttcaggg cgttcgccat cacaattagg ttttaggtat
     2341 tatgtcaatc gtttacttga acaaacatct catcaaaaaa caaataaatt aagacgatta
     2401 aatcaattgt tagttgagaa tcaatatgat gtatcatcag cattgacata ttttgcagat
     2461 gaattatcaa atatatctca atatacaact ttagttgttc atcctaatca taaacaagat
     2521 attatcaata atgtacactt gattcgtgct aatcctaatt tagttataat ggttatcgta
     2581 ttttcatcag gtcatgttga gcatgtacat cttgcttcag acataccgtt taataatgac
     2641 aaactaaata caatatcaaa ttttgttaca aacaaactaa ctgagtttaa tcagaattta
     2701 caagatgata ttgtctcttt tgttcaatca gagcaggaag aaatttttat caataaattg
     2761 ttaaatacga tgaataatca tatttctaat caaagtaata gcatttatat gggtggaaag
     2821 gttaaactta ttgatgcatt gaatgaaagt aatgtatctt caattcagcc cattctacaa
     2881 tatatagaat caaatagaat tgcagaatta ttacaagata tatcttcacc aaatattaat
     2941 gtaaaaattg gtaatgaaat tgatgacagc ttaagtgata tttcaattgt aacaagtcaa
     3001 tatcattttg atgaaacgtt aaaaggtcaa atcgctgtga ttggacctac agctatgcat
     3061 tatcaaaatg tcattcaatt attaaataga atttggtaat gatggattag aaagtattgg
     3121 aggacagaaa atgacaaata aagacgaatc agttgaaaaa aacactgaat caacagttga
     3181 agaaacaaac gtcaaacaaa atattgatga ttcagttgaa caagctgaag aaagtaaagg
     3241 tcatttacaa gatgaagcaa tagaagaaac gtctgacgag aatgttattg aagaaataga
     3301 tccaaaagat caaaaaaata atgaacttca acaattagca gatgaaaacg aagagaaata
     3361 tttaaggctc tacgctgagt ttgaaaatta taagcgtaga attcaaaaag aaaatgaaat
     3421 aaacaaaaca tatcaagcac aacgtgtgtt aacagatatt ttaccagcaa tagacaatat
     3481 agaacgtgca cttcaaattg aaggtgatga tgagactttt aaatctcttc aaaaaggtgt
     3541 acaaatggtg catgaaagtt tgattaacgc actaaaagat aatggtcttg aagttattaa
     3601 aactgaaggt gaagcatttg atccaaatat tcaccaagct gtagttcaag atgataaccc
     3661 tgattttgaa tctggcgaaa tcactcaaga actacaaaaa ggatacaagc ttaaagatag
     3721 agtattaaga ccatcaatgg tcaaagtaaa ccaataactt aaatttggcg aaaagacatt
     3781 gtttaaaatt aaattaattt aatgattaaa tggaggaatt ttattatgag taaaattatt
     3841 ggtatagact taggtacaac aaattcatgt gtaacagtat tagaaggcga tgagccaaaa
     3901 gtaattcaaa accctgaagg ttcacgtaca acaccatctg ttgtagcttt caaaaatgga
     3961 gaaactcaag ttggtgaagt agcaaaacgt caagctatta caaacccaaa cactgttcaa
     4021 tctattaaac gtcatatggg tactgattat aaagtagata ttgaaggtaa atcatacaca
     4081 ccacaagaaa tctcagctat gattttacaa aacttaaaaa atacagctga aagctattta
     4141 ggtgagaaag ttgacaaagc tgtaattaca gtacctgcat actttaacga tgctgaacgt
     4201 caagcaacta aagatgctgg taaaattgct ggtttagaag ttgagcgtat cattaatgaa
     4261 ccaacagctg cagcattagc atatggttta gacaaaactg ataaagatga aaaagttctt
     4321 gtttttgact taggtggcgg tacatttgac gtatctatcc tagaattagg tgacggtgta
     4381 ttcgaagtac tatcaacagc cggtgacaac aaacttggcg gtgatgattt tgaccaagta
     4441 attattgact acctagttgc agaattcaaa aaagaaaatg gcgtagactt atctcaagat
     4501 aaaatggcat tacaacgttt gaaagatgct gctgaaaaag ctaaaaaaga cttatcaggt
     4561 gtatcacaaa ctcaaatctc attaccattt atctcagctg gtgaaaacgg tccattacac
     4621 ttagaagtaa acttaactcg ttctaaattt gaagaattat cagattcatt aattagaaga
     4681 acaatggaac ctacacgcca agcaatgaaa gacgctggct taacaaactc agatatcgat
     4741 gaagttatct tagttggtgg atcaactcgt attccagcag tacaagaagc tgtcaaaaaa
     4801 gaaatcggta aagagcctaa caaaggagta aacccggacg aagtagtggc aatgggagct
     4861 gcaatccaag gtggcgttat cacaggtgac gttaaagacg tagtattatt agacgtaaca
     4921 ccactatctt taggtattga aattttaggt ggacgtatga atacgttaat tgaacgtaac
     4981 actacgattc ctacatctaa atctcaaatc tattcaacag cagtagataa tcaaccatca
     5041 gtagatgtac acgtattaca aggtgaacgt ccaatggctg cggataataa aacacttggt
     5101 agattccaat tgactgatat tccaccagct gaacgtggta aacctcaaat tgaagtaacg
     5161 tttgatatcg ataaaaacgg tattgtaaat gtaactgcaa aagacttagg tacaaataaa
     5221 gaacaaagaa ttacaattca atcaagttct tcattatcag acgaagaaat cgaccgtatg
     5281 gtaaaagatg ctgaagttaa cgctgaagca gataaaaaac gtcgtgaaga agtagactta
     5341 agaaacgaag ctgacagtct agtattccaa gttgaaaaaa ctttaactga tttaggcgaa
     5401 aatatcggtg aagaagataa aaaatctgct gaagagaaaa aagacgctct taaaactgct
     5461 ttagaaggtc aagatataga agatattaaa tctaaaaaag aagaacttga aaaagtgatt
     5521 caagaattat cagcaaaagt atatgagcaa gcggctcaac agcaacaaca agcacaaggt
     5581 gctaatgctg gtcaaaacaa tgatagtact gtagaagatg ctgaatttaa agaagtaaaa
     5641 gacgacgaca aaaaataatt aaacaataca attagaatgt tgtcatgatc tgaaaagtca
     5701 aagtcaatag aacattggct ttggcttttt atttggatag tatgacatat tacgttaaac
     5761 tatatgagtt aattaagaaa aggagagata gctgtggcca aaagagatta ttatgaagtt
     5821 ttaggcatta gtaaggatgc ttcaaaagat gaaatcaaaa aagcgtatcg aaagctttcg
     5881 aaaaaatatc atccagatat taacaaagaa gaaggtgcag atgaaaagtt taaagaaatt
     5941 tctgaagcct atgaagtttt aagtgatgat aataaacgcg caagctatga tcaatttgga
     6001 catgatggtc cacaaggttt tggtggacaa ggattcaatg gctctgactt tggcggtttt
     6061 agtggcttcg gtggcggcgg ttttgaagat atctttagct ctttcttcgg tggcggcaga
     6121 caaagagatc caaatgcacc gcaaaaaggt gatgatcttc agtatacaat gacattaaca
     6181 tttgaagaag cggtatttgg tacaacaaaa gaaatttcaa tccgtaaaga tgtaacatgc
     6241 gaaacatgtc atggtgatgg tgcaaagcct ggaacaagta aaaagacttg tagttactgt
     6301 aatggcgctg gtcatgtagc tgtagaacaa aacacaattt taggtagagt tcgtactgaa
     6361 caagtttgtc ctaaatgtaa tggaagtggt caagaatttg aagaagcttg tccaacatgt
     6421 cacggaaaag gtactgaaaa taaaacagtt aaattagaag tgaaagtacc tgaaggtgtc
     6481 gacaatgaac aacaaattag attagctggt gaaggctctc caggcgtgaa tggaggacct
     6541 gctggtgatt tatacgtagt atttagagtt aaaccatctg aaacatttaa acgtgatggt
     6601 gatgatattt attacaaatt aaatgttagc ttcccacaag cagctttagg cgatgaaata
     6661 aaaataccaa cattaaataa tgaagttatg ttaacaatcc ctgctggtac acaaacaggt
     6721 aagcaattcc gcttaaaaga aaagggtata aaaaatgttc atggctatgg atacggagat
     6781 ttatatgttg atattaaagt agtaacgcct actaaattaa cagatagaca aaaagaacta
     6841 atgaaagaat ttgcccaatt aaatggtgaa gaaattaatg aacaaccttc gaattttaaa
     6901 gatagagcaa aaagattctt taagggagaa taaagtatga actggacaga gctttcaatt
     6961 attattaatc atgaagcagt agaattggct accaatatac ttgaaaatca tggatcaaat
     7021 ggtgtcgtga tagaagattc agatgattta attaaccaac cagaagataa atacggtgaa
     7081 atttacgctt tgaaaaaaga ggattatcca gataagggag taagattgaa agcctatttt
     7141 aatgaaatga cttatgatga taagttgcga cagcaaatta aagatgagtt attaaattta
     7201 gatgaacttg atcaacataa cgttcaattc agtgagcaaa ttattgcaga gacggattgg
     7261 gaaaatgaat ggaaaaacta tttccatcca ttccgagcgt cgaagaagtt cacaatagtt
     7321 cctagttggg aaacatatgc taaagaagcg gatgaagagc tttgcattga gctcgaccca
     7381 ggtatggctt ttggaacagg tgatcatccg actacaagta tgtgtttgaa ggcaatagaa
     7441 acatatgtat tgccacagca ttcagtaatt gatgttggta ctggctcagg tatattaagt
     7501 attgcaagtc atctaatcgg tgtaaaacgt attaaagcgt tggatattga tgaaatggca
     7561 gtgagtgtag ctaaagaaaa cttcagaaga aatcattgtg aaacgttaat tgaagctgtt
     7621 ccaggtaact tattgaaaga cgaaacagaa aaatttgata ttgtaatagc aaatatttta
     7681 gcgcatatta ttgatgaaat gattgaagat gcttataata ctctaaatga aggcggttat
     7741 tttattactt ctggtattat aaaagagaag tatgaaggta tacagtcaca tatggagcgt
     7801 gtaggtttta aaattatttc agaacaacat gacaacggtt gggtttgtct tgttggccag
     7861 aaagtgagtg aataatgtgc aacgttattt catagaccaa aacgctgatg taagtcagcg
     7921 tttttttatt acaaaaaaag aagatattca tcatataaca aatgtaatga gatatgatgt
     7981 tggtagtaaa attattttaa cttttaatga tcaaacagtt tatttatgtg aaattgctga
     8041 cataacaagt gataaaattg aagttgattt aaaagaaaaa caaaatatta atacagaatt
     8101 gccagttgat gttacgattt gcagtggact aatcaaagct gacaaatatg agtggttgct
     8161 acaaaaagct actgaattgg gtgcttcatc atttatagct gtgagcatgg aacgttcaat
     8221 tgttaaatta aacgaggcaa aagttgccaa aaagatagag cgttggcaaa aaataattaa
     8281 agaagctgct gaacaaagct atcgtttagt gattccatct attcaattcg agtcgaattt
     8341 aaaattaatt tgtgatacta ttgataatta tgactatatt cttattgcat atgaagagga
     8401 agcaaaagat ggtgagttaa gcaatttcaa gcaaacttta caacaattca atgctcagga
     8461 taaagtgttg atgatttttg gtcctgaggg tggtttgtca gaaaatgaaa tttcattatt
     8521 tagtaatact agtacagttg ttggtcttgg gccgagaatt ttacgggcag aaactgcgcc
     8581 attgtatgcg ttaagtgcaa taagttatga aaaagaatta atggggtgaa tatttatgtc
     8641 aacagttgcg tttcacacat taggttgtaa agtaaaccat tatgaaactg aagcaatctg
     8701 gcaattattt aaagaagcaa actatgagcg cgttgacttt gaagcgaatg ctgatgtatt
     8761 tgttattaat acttgtacag taacgaatac gggtgataaa aaaagtcgtc aaataattag
     8821 acgtgcaata agacaaaatc ctgatgctgt aatctgtgta acaggttgtt atgcgcaaac
     8881 ttcatcagct gaaattatgg aaattcctgg tgtcgatgta gtagttggta cacaagatag
     8941 acataaacta ttaggttaca ttgacgaatt ccgtaaagaa cgccaaccaa ttaatggtgt
     9001 tggaaatatc atgaaaaatc gtaaatatga agaattagat gtcccttatt ttacagatag
     9061 aacacgtgcg tcattaaaaa ttcaagaagg ttgtaacaac ttctgcacat tctgtattat
     9121 tccatgggct cgtggcttaa tgcgttcaag agatccggaa aaagtagttg aacaagcgac
     9181 gcaactagtg aattcaggat ataaggaaat tgtattgacg ggaattcata caggtggata
     9241 tggtcaagat ttaaaagatt ataacttggc ccaattatta cgtgatcttg aaacgattaa
     9301 tggattagaa cgaattcgaa tttcttcaat tgaagcaagt caacttacag atgaagtaat
     9361 tgacgtttta gaacgttcaa caaaagttgt gcgtcatttg catattccat tacaatctgg
     9421 ttcagataca gtattaaaac gtatgagacg taagtataca atggatagat tttcagaacg
     9481 attaacaaaa ttgcataaag ctttaccaga cttggcagtt acgagtgatg taattgttgg
     9541 tttcccaggt gaaactgaag ctgagttcca agaaacatat gattttatcg taaagcataa
     9601 gttctctgaa ctgcatgttt tcccttattc tcctagaatt ggcacgccag ctgcaagaat
     9661 ggatgaccaa attgatgaag aaattaaaaa tgaacgggtg cataagttaa ttacgctaag
     9721 caatcaactc ggaaagttat atgcgtctaa atttgatcaa gatgtgcttg aagtaattcc
     9781 tgaggaacag ggtgacacag aaggtacatt agttggatat gcagataatt atatgaaagt
     9841 acaatttgaa ggtgacgaat cactcatagg tcaaattgta aaagttaaaa ttacgcaagc
     9901 aaattatcca ttaaatgaag ggcaagcaat taaagttgtt gatttcgcaa caaataaatc
     9961 tgatagagaa gttttagttt aagtattcct tgattcatac catatggttc cgtattaaag
    10021 atataggttt tgtaacgttg ttttaacggc ttcacaattt actatataag caactcttct
    10081 cattaaataa attattaaga gatttttaga acaaaatcta aaagtctttg tgattttgat
    10141 gtgaaatatg tttcaaataa aaaacaattt actaattgac cataaattac agatatatta
    10201 tacttataaa tgcatagttt tactgtgcaa ttgactataa agttccgttg atatttggag
    10261 ggagggaaat acagatgtct aaaacagtag tacgtaaaaa tgaatcactt gaagatgcgt
    10321 tacgtagatt taaacgttca gtttctaaaa gtggaacaat ccaagaagta cgtaaacgtg
    10381 aattttacga aaaaccaagc gtaaaacgta aaaagaaatc agaagctgca cgtaaacgta
    10441 aattcaaata attaatacct ctgttgactc cctcaacacg aatattaatt atataaaaca
    10501 aacatcacaa gttagtgtct gacactaata tgtgatgttt ttttgttgtc aatttttaat
    10561 taaaaaaagt tatatagttt ataaataatc aaattgatat tctataggtt cttataacta
    10621 taaagtatat tcaatttcat gtataattaa tgtgagggcg aggtgaaatt gtgagttata
    10681 ataatttttt acaaatgaca actatcttgg aatcaatggc tggagatact tgggttgaac
    10741 aagttagcaa tataattgtt caacctattt ttacgttaat attaacctgt ttgacattct
    10801 taggatttgt atatcaactt tactctaaaa aaatcaatgc agctggtatt atcgccacat
    10861 tatcattact tattttattt ttgggatttc taatccaagg aaatgtcaat atgcattcta
    10921 tcttaatatt ctcaattggc gttatattag ttgtaattga attatttgta gttggtgcag
    10981 taattggtat tattggcatg atactgataa ctataagcat aacaacgctc ggtgataatt
    11041 tgctatttat gcttgcgaat gttatcgttg ccttgatttt aacgattgta gaatgggtga
    11101 tattagtgaa gattttcaac agaaagattc cgtttttgga taaagttatc ttaaaagatt
    11161 caactaattc tgagtcaggt tacaattctc atgataaccg ctcgcacctc gtaggaaaga
    11221 ctgctcaaac agttacagat cttcgacctg cagggattat tttttgtgaa aatgaacgta
    11281 ttgatgctgt ttcagatggc aactttattt tgcgcaataa aacggtaaaa atccttgaag
    11341 ttgaaggaac aagagtagtt gtgagggaag tagattaatt aaaaggagcg ataccatgtt
    11401 tagtttaagt tttatcgtaa tagcagttat tatagtagtt gcattactta ttttattctc
    11461 atttgtaccc attggtttat ggatttcagc gttagcagct ggcgttcatg ttggtatagg
    11521 tacattggtt ggtatgcgtt tacgtcgtgt atctccaaga aaagttatag cgccattaat
    11581 taaagcgcac aaagcaggac tagcattaac aacaaaccaa ttagaatcgc attatctagc
    11641 aggaggaaat gttgacagag ttgttgacgc taatattgct gcacaacgtg ctgacattga
    11701 tcttcctttc gaacgtgctg ctgcaattga ccttgcagga cgtgacgtat tagaagcggt
    11761 tcaaatgtct gttaatccta aagtcattga aacaccattt atcgcaggtg tagcaatgaa
    11821 cggtattgaa gtgaaagcca aagctcgtat cacagttaga gctaatattg ctcgacttgt
    11881 tggtggtgct ggtgaagaaa caatcatcgc acgtgttggt gaaggtatcg tttcaacaat
    11941 tggttctagt aagcatcata cagaagtact tgaaaaccca gataatattt ctaaaacagt
    12001 tttaagcaaa ggtttagatt caggtactgc atttgaaatt ttatcaattg atattgctga
    12061 cgttgatatt agtaaaaata ttggtgcaga cttacaaact gaacaagcat tagcagacaa
    12121 aaatattgca caagcaaaag ctgaagaacg tagagctatg gctgtagcaa ctgagcaaga
    12181 aatgaaagcg cgtgtacaag aaatgcatgc taaagtagtt gaagccgaat ctgaagtacc
    12241 attagctatg gctgaagcat tacgttcagg taatatcagt gttaaagatt attataattt
    12301 gaaaaatatc gaagctgata caggcatgag aaatgcaatt aataaacgaa ctgatcaaag
    12361 tgatgatgag tcacctgaac attaagtcga gaggtgatta aatgagtgtc ggtattctaa
    12421 tttttgtcat atcagtgatc atttctatca ttactactat gcgcgaaaat agtcataaag
    12481 atagacaaaa tcaaaagcca cctcaaaaaa catctaccga taatgaacca aaaaaaggtg
    12541 gcttttttga agaaattgag cgaacgttta aagaaataag tgaagaatta aatgaagaag
    12601 aaaagaaatc atcgaaacga aaatatgatg atacgttacc acctttattc gatgaacttc
    12661 caaaggaaga gcctaaatcg aaacctgttg tagaacctat ggcacctaaa aaacaacaag
    12721 aaacaaaacc gatgacagag aaaccaatca cagtgcctaa agcagaaccg gtggagcaga
    12781 aacatagacc ttctagacaa gataattctg acgaaattag acgtcaatta gaaaaatcac
    12841 ttagagatga tattaaaacg attcgtactg acattgatag agaaaaagaa aagcaaattg
    12901 ctaaaatgga aaaacgtgct agagatatta ttgaggataa atacttatct gaacgtacaa
    12961 aacgtttgaa attaaagcag ctgcttaatt ctcaaaatgt cgaaaaagat ttgactaaat
    13021 cagcgttcca atttgataaa gatgaagtaa tcaatggtat gatatggtca gaaattttag
    13081 ctaaaccaaa acaattataa aattttttga aaacaagcac tatcgtaatg gtagttgctt
    13141 gtttttttac gttaagaaaa attaaaaaac aaagagaatt tttcgagaaa tattagttat
    13201 ttaaattaca gcaaaaaatt gattagtcta aaattgaatc tgcttttatg acaaggtgaa
    13261 aagtataaat gattatttta aattaaagaa aa
//
LOCUS       DALPQQ010000067        13125 bp    DNA     linear   BCT 22-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus strain K18-6-464
            SAMD00233528-rid16434743.denovo.067, whole genome shotgun sequence.
ACCESSION   DALPQQ010000067 DALPQQ010000000
VERSION     DALPQQ010000067.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMD00233528
            Sequence Read Archive: DRR236061
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 13125)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13125)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001543423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001543423.1
            Genome Coverage       :: 77x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/22/2022 17:09:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,811
            CDSs (total)                      :: 2,743
            Genes (coding)                    :: 2,689
            CDSs (with protein)               :: 2,689
            Genes (RNA)                       :: 68
            rRNAs                             :: 2, 4, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 4, 2 (16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 54
            CDSs (without protein)            :: 54
            Pseudo Genes (ambiguous residues) :: 0 of 54
            Pseudo Genes (frameshifted)       :: 27 of 54
            Pseudo Genes (incomplete)         :: 27 of 54
            Pseudo Genes (internal stop)      :: 10 of 54
            Pseudo Genes (multiple problems)  :: 10 of 54
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13125
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMD00233528-rid16434743.denovo.067"
                     /strain="K18-6-464"
                     /db_xref="taxon:1280"
                     /geo_loc_name="Japan: Niigata"
     gene            complement(19..459)
                     /locus_tag="O7798_001614"
     CDS             complement(19..459)
                     /locus_tag="O7798_001614"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499680.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetyltransferase"
                     /protein_id="HDC2863873.1"
                     /translation="MSEIKRLEINYKTDELFENFRAFGNKDLYMVNELNGQMIDASSD
                     SPFYGIFVGDQLGARMALLKKGDVEEIYFPDFEDYILLWKLEVLPKYQNRGYASELID
                     FAKSFNMPIKAIGRNDSKDFFLHHGFTDVEAKNIEGHDVLLWKP"
     gene            654..2267
                     /gene="bshC"
                     /locus_tag="O7798_001615"
     CDS             654..2267
                     /gene="bshC"
                     /locus_tag="O7798_001615"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000340457.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bacillithiol biosynthesis cysteine-adding enzyme
                     BshC"
                     /protein_id="HDC2863874.1"
                     /translation="MDCKVVSLNEKDQFIPKIKSSDPVITGLFQYDAAQQTSFEKRMS
                     KENNGREAALANVIREYMSDLKLSSEQELNIQHLANGSKVVIGGQQAGLFGGPLYTFH
                     KIFSIITLSKELTDTHKQQVVPVFWIAGEDHDFDEVNHTFVYNENHGSLHKVKYHTME
                     MPETTVSRYYPDKAELKQTLKTMFIHMKETVHTQGLLEICDRIIDQYDSWTDMFKALL
                     HETFKAYGVLFIDAQFEPLRKMEAPMFKKILKKHQLLDDAFRATQQRTQNQGLNAMIQ
                     TDTNVHLFLHDENMRQLVSYDGKHFKLNKTDKTYIKEEIINIAENQPELFSNNVVTRP
                     LMEEWLFNTVAFVGGPSEIKYWAELKDVFELFDVEMPIVMPRLRITYLNDRIEKLLSK
                     YNIPLEKVLVDGVEGERSKFIREQASHQFIEKVEGMIEQQRRLNKDLLDEVAGNQNNI
                     NLVNKNNEIHIQQYDYLLKRYLLNIERENDISMKQFREIQETLHPMGGLQERIWNPLQ
                     ILNDFGTDVFKPSTYPPLSYTFDHIIIKP"
     gene            2411..2842
                     /gene="mraZ"
                     /locus_tag="O7798_001616"
     CDS             2411..2842
                     /gene="mraZ"
                     /locus_tag="O7798_001616"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015900043.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="division/cell wall cluster transcriptional
                     repressor MraZ"
                     /protein_id="HDC2863875.1"
                     /translation="MFMGEYDHQLDTKGRMIIPSKFRYDLNERFIITRGLDKCLFGYT
                     LDEWQQIEEKMKTLPMTKKDARKFMRMFFSGAVEVELDKQGRINIPQNLRKYANLTKE
                     CTVIGVSNRIEIWDRETWNDFYEESEESFEDIAEDLIDFDF"
     gene            2858..3793
                     /gene="rsmH"
                     /locus_tag="O7798_001617"
     CDS             2858..3793
                     /gene="rsmH"
                     /locus_tag="O7798_001617"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017724209.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA (cytosine(1402)-N(4))-methyltransferase
                     RsmH"
                     /protein_id="HDC2863876.1"
                     /translation="MFHHISVMLNETIDYLNVKENGVYIDCTLGGAGHALYLLNQLND
                     DGRLIAIDQDQTAIDNAKEVLKDHLHKVTFVHSNFRELTQILKDLNIEKVDGIYYDLG
                     VSSPQLDIPERGFSYHHDATLDMRMDQTQELTAYEIVNNWSYEALVKIFYRYGEEKFS
                     KQIARRIEAHREQQPITTTLELVDIIKEGIPAKARRKGGHPAKRVFQALRIAVNDELS
                     AFEDSIEQAIELVKVDGRISVITFHSLEDRLCKQVFQEYEKGPEVPRGLPVIPEAYTP
                     KLKRVNRKPITATEEDLDDNNRARSAKLRVAEILK"
     gene            3807..4208
                     /gene="ftsL"
                     /locus_tag="O7798_001618"
     CDS             3807..4208
                     /gene="ftsL"
                     /locus_tag="O7798_001618"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499686.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsL"
                     /protein_id="HDC2863877.1"
                     /translation="MAVEKVYQPYDEQVYNSIPKQQPQTKPEKKSVSRKVVVQLTKFE
                     KVLYITLITVIAMLSIYMLSLKMDAYDTRGKIADLDYKIDKQSSENSALQSEIKKNSS
                     YERIYEKAKKQGMSLENDNVKVVRSNGEAKN"
     gene            4189..6423
                     /locus_tag="O7798_001619"
     CDS             4189..6423
                     /locus_tag="O7798_001619"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499687.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="penicillin-binding protein"
                     /protein_id="HDC2863878.1"
                     /translation="MAKQKIKIKKNKIGAVLLVGLFGLLFFILVLRISYIMITGHSNG
                     QDLVMKANEKYLVKNAQQPERGKIYDRNGKVLAEDVERYKLVAVIDKKASANSKKPRH
                     VVDKKETAKKLSTVINMKPEEIEKRLSQKKAFQIEFGRKGTNLTYQDKLKIEKMNLPG
                     ISLLPETERFYPNGNFASHLIGRAQKNPDTGELKGALGVEKIFDSYLSGSKGSLRYIH
                     DIWGYIAPNTKKEKQPKRGDDVHLTIDSNIQVFVEEALDGMVERYQPKDLFAVVMDAK
                     TGEILAYSQRPTFNPETGKDFGKKWANDLYQNTYEPGSTFKSYGLAAAIQEGAFDPDK
                     KYKSGHRDIMGSRISDWNRVGWGEIPMSLGFTYSSNTLMMHLQDLVGADKMKSWYERF
                     GFGKSTKGMFDGEAPGQIGWSNELQQKTSSFGQSTTVTPVQMLQAQSAFFNDGNMLKP
                     WFVNSVENPVSKRQFYKGQKQIAGKPITKDTAEKVEKQLDLVVNSKKSHAANYRIDGY
                     EVEGKTGTAQVAAPNGGGYVKGPNPYFVSFMGDAPKKNPKVIVYAGMSLAQKNDQEAY
                     ELGVSKAFKPIMENTLKYLNVGKSKDDTSNAEYSKVPDVEGQDKQKAIDNVSAKSLEP
                     VTIGSGTQIKAQSIKAGNKVLPHSKVLLLTDGDLTMPDMSGWTKEDVIAFENLTNIKV
                     NLKGSGFVSHQSISKGQKLTEKDKIDVEFSSENVDSNSTNNSDSNSDDKKKSDSKTDK
                     DKSD"
     gene            6715..7680
                     /locus_tag="O7798_001620"
     CDS             6715..7680
                     /locus_tag="O7798_001620"
                     /EC_number="2.7.8.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499688.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phospho-N-acetylmuramoyl-pentapeptide-
                     transferase"
                     /protein_id="HDC2863879.1"
                     /translation="MIFVYALLALVITFVLVPVLIPTLKRMKFGQSIREEGPQSHMKK
                     TGTPTMGGLTFLLSIVITSLVAIIFVDQANPIILLLFVTIGFGLIGFIDDYIIVVKKN
                     NQGLTSKQKFLAQIGIAIIFFVLSNVFHLVNFSTSIHIPFTNVAIPLSFAYVIFIVFW
                     QVGFSNAVNLTDGLDGLATGLSIIGFTMYAIMSFVLGETAIGIFCIIMLFALLGFLPY
                     NINPAKVFMGDTGSLALGGIFATISIMLNQELSLIFIGLVFVIETLSVMLQVASFKLT
                     GKRIFKMSPIHHHFELIGWSEWKVVTVFWAVGLISGLIGLWIGVH"
     gene            7682..9031
                     /locus_tag="O7798_001621"
     CDS             7682..9031
                     /locus_tag="O7798_001621"
                     /EC_number="6.3.2.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499689.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylmuramoyl-L-alanine--D-glutamate
                     ligase"
                     /protein_id="HDC2863880.1"
                     /translation="MLNYTGLENKNVLVVGLAKSGYEAAKLLSKLGANVTVNDGKDLS
                     QDAHAKDLESMGISVVSGSHPLTLLDNNPIIVKNPGIPYTVSIIDEAVKRGLKILTEV
                     ELSYLISEAPIIAVTGTNGKTTVTSLIGDMFKKSRLTGRLSGNIGYVASKVAQEVKPT
                     DYLVTELSSFQLLGIEKYKPHIAIITNIYSAHLDYHENLENYQNAKKQIYKNQTEEDY
                     LICNYHQRQVIESEELKAKTLYFSTQQEVDGIYIKDGFIVYKGVRIINTEDLVLPGEH
                     NLENILAAVLACILAGVPIKAIIDSLTTFSGIEHRLQYVGTNRTNKYYNDSKATNTLA
                     TQFALNSFNQPIIWLCGGLDRGNEFDELIPYMENVRAMVVFGQTKAKFAKLGNSQGKS
                     VIEANNVEDAVDKVQDIIEPNDVVLLSPACASWDQYSTFEERGEKFIERFRAHLPSY"
     gene            9047..10366
                     /locus_tag="O7798_001622"
     CDS             9047..10366
                     /locus_tag="O7798_001622"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499690.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsQ/DivIB"
                     /protein_id="HDC2863881.1"
                     /translation="MDDKTKNDQQESNEDKDELELFTRNTSKKRRQRKRSKATHFSNQ
                     NKDDTSQQADFDEEIYLINKDFKKEESNDKNNDSASSHANDNNIDDSTDSNIENEDYR
                     YNQEIDDQNESNVISVDNEQPQSAPKEQNSDSIDEETVTKKERKSKVTQLKPLTLEEK
                     RKLRRKRQKRIQYSVITILVLLIAVILIYMFSPLSKIAHVNINGNNHVSTSKINKVLG
                     VKNDSRMYTFSKKNAINDLEENPLIKSVEIHKQLPNTLNVDITENEIIALVKYKGKYL
                     PLLENGKLLKGSNDVKINDAPVMDGFKGTKEDDMIKALSEMTPEVRRYIAEVTYAPSK
                     NKQSRIELFTTDGLQVIGDISTISKKMKYYPQMSQSLSRDSSGKLKTRGYIDLSVGAS
                     FIPYRGNTSSQSESDKNVTKSSQEENQAKEELQSVLNKINKQSSKNN"
     gene            10472..11884
                     /gene="ftsA"
                     /locus_tag="O7798_001623"
     CDS             10472..11884
                     /gene="ftsA"
                     /locus_tag="O7798_001623"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499691.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsA"
                     /protein_id="HDC2863882.1"
                     /translation="MEEHYYVSIDIGSSSVKTIVGEKFHNGINVIGTGQTYTSGIKNG
                     LIDDFDIARQAIKDTIKKASIASGVDIKEVFLKLPIIGTEVYDESNEIDFYEDTEING
                     SHIEKVLEGIREKNDVQETEVINVFPIRFIVDKENEVSDPKELIARHSLKVEAGVIAI
                     QKSILINMIKCVEACGVDVLDVYSDAYNYGSILTATEKELGACVIDIGEDVTQVAFYE
                     RGELVDADSIEMAGRDITDDIAQGLNTSYETAEKVKHQYGHAFYDSASDQDIFTVEQV
                     DSDETVQYTQKDLSDFIEARVEEIFFEVFDVLQDLGLTKVNGGFIVTGGSANLLGVKE
                     LLSDMVSEKVRIHTPSQMGIRKPEFSSAISTISSSIAFDELLDYVTINYHDNEETEED
                     VIDVKDKDNESKLGGFDWFKRKTNKKDTHENEVESTDEEIYQSEDNHQEHKQNHEHVQ
                     DKDKDKEESKFKKLMKSLFE"
     gene            11917..13089
                     /gene="ftsZ"
                     /locus_tag="O7798_001624"
     CDS             11917..13089
                     /gene="ftsZ"
                     /locus_tag="O7798_001624"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499692.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsZ"
                     /protein_id="HDC2863883.1"
                     /translation="MLEFEQGFNHLATLKVIGVGGGGNNAVNRMIDHGMNNVEFIAIN
                     TDGQALNLSKAESKIQIGEKLTRGLGAGANPEIGKKAAEESREQIEDAIQGADMVFVT
                     SGMGGGTGTGAAPVVAKIAKEMGALTVGVVTRPFSFEGRKRQTQAAAGVEAMKAAVDT
                     LIVIPNDRLLDIVDKSTPMMEAFKEADNVLRQGVQGISDLIAVSGEVNLDFADVKTIM
                     SNQGSALMGIGVSSGENRAVEAAKKAISSPLLETSIVGAQGVLMNITGGESLSLFEAQ
                     EAADIVQDAADEDVNMIFGTVINPELQDEIVVTVIATGFDDKPTSHGRKSGSTGFGTS
                     VNTSSNATSKDESFTSNSSNAQATDSVSERTHTTKEDDIPSFIRNREERRSRRTRR"
BASE COUNT         4853 a         1808 c         2529 g         3935 t
ORIGIN      
        1 gtgtcgaata ttattatctt atggtttcca caataagaca tcatgtccct ctatattttt
       61 agcttccaca tctgtaaatc catgatgtaa aaagaaatcc ttagaatcat ttctgccaat
      121 ggctttaatt ggcatattga aactctttgc aaaatcaatc aattctgaag cgtaccctct
      181 gttttgatat tttggtaata cttctaactt ccataataat atataatctt caaaatctgg
      241 gaagtagatt tcttcgacat cacctttttt tagtaatgcc attctagctc ctaattgatc
      301 tccgacaaat atgccataaa atggtgaatc tgaacttgca tcaatcattt gaccgtttaa
      361 ctcattgacc atgtataagt ctttgttgcc aaacgctcta aagttttcga ataattcgtc
      421 agttttgtaa ttaatttcaa gacgtttgat ttcactcata tttatctacc ccttatttgt
      481 ttactactat tattatacat taaaccactt gtgtttttca ttgatttgaa aatgtaaaac
      541 aatgaatatt ataaattttc catgattaaa ttgattttca agccgtaaaa ttgtcaatca
      601 ccggtataga ctttatacta tagtttgtaa tcgcgtactt aaggagaaaa aacatggact
      661 gtaaagtagt tagtttaaat gaaaaagatc agtttatacc aaaaataaag agcagtgacc
      721 ctgtaataac aggattattt caatatgatg cagctcaaca aactagtttt gaaaaaagga
      781 tgtctaaaga aaataatgga agagaagcgg cattagcgaa tgttattcgt gaatatatga
      841 gtgatttaaa gctttcaagt gaacaagaat taaacataca acatttagct aatggttcaa
      901 aagttgtgat tggtggacaa caagcagggc ttttcggggg accattgtat acattccata
      961 aaatattttc aatcattact ttatctaagg aattaacgga tacacataag caacaagtag
     1021 taccagtttt ttggattgca ggagaagatc atgatttcga tgaagtgaat catacatttg
     1081 tttataacga aaatcatggg tcgctgcata aggttaaata tcatacaatg gagatgccag
     1141 agacgactgt ctctagatat tatcctgata aggctgagtt gaaacaaact ttaaaaacga
     1201 tgttcattca tatgaaagaa actgttcata cacaaggtct actggagatt tgtgacagaa
     1261 ttattgacca atatgactcg tggactgata tgtttaaagc actactgcat gaaacattta
     1321 aagcatatgg cgttctattt atagatgcgc agtttgagcc gttaagaaaa atggaagcgc
     1381 ctatgtttaa aaagattttg aaaaaacatc agttgcttga tgatgctttt agagcaacac
     1441 aacaacgtac tcaaaatcaa ggcttgaatg cgatgataca aacagataca aatgttcatt
     1501 tattcttaca tgatgaaaat atgcgtcaat tagtttcgta tgatggtaag cattttaaat
     1561 taaataaaac agataagaca tatataaagg aagaaattat aaatattgcg gaaaatcaac
     1621 ctgaattatt ttctaataat gtagtgacaa gaccattaat ggaagaatgg ttatttaaca
     1681 cggtggcatt tgttggagga ccgagtgaaa ttaagtactg ggctgaacta aaagatgtat
     1741 ttgaactatt tgatgttgaa atgcctatcg tgatgccaag gcttagaatt acttatttaa
     1801 atgaccgtat agaaaaatta ctttcgaaat acaatattcc attagaaaaa gtgttagtcg
     1861 atggtgttga aggagaaaga agtaagttta ttagagaaca agcatcacat caatttattg
     1921 aaaaggtaga aggtatgatt gaacaacagc gtcgtctaaa caaagactta ttagatgaag
     1981 tggcggggaa tcaaaataat attaaccttg tgaataaaaa taatgaaatt catatacaac
     2041 agtatgatta tttgttaaaa cgttatcttt taaacattga aagagaaaac gacatcagta
     2101 tgaagcaatt tagagaaatt caagaaacac tccatccaat gggaggatta caagaaagaa
     2161 tatggaatcc acttcaaatt ttgaatgatt ttgggacaga tgtgttcaag ccctccacct
     2221 atccaccact ttcttacact tttgatcata ttattataaa accttaatat accaagggtt
     2281 tagcccgatt tatcttaatg ataaatcggg catttttttg ttttttaaaa taaatttcac
     2341 aaattttgta taaatagtgg tggatagtgg ggagatgtgg taaattatat ataaggtgag
     2401 gtgataaaaa atgttcatgg gagaatacga tcatcaatta gatacaaaag gacgtatgat
     2461 tataccgtcc aagtttcgtt atgacttaaa tgagcgtttt attatcacaa gaggccttga
     2521 taaatgttta ttcggttaca ctctagacga atggcaacag attgaagaga aaatgaaaac
     2581 cttacctatg acaaaaaaag acgcacgtaa gtttatgcgt atgttcttct ctggtgctgt
     2641 tgaagtagaa cttgataagc aagggcgtat taacatccct caaaacttga ggaaatacgc
     2701 taatttaact aaagaatgta cagtaatcgg tgtttcaaat cgtattgaga tttgggatag
     2761 agaaacttgg aatgatttct atgaagaatc tgaagaaagt ttcgaagata ttgctgaaga
     2821 tttaatagat tttgattttt aaaatggagg aattgaagtg tttcatcata tcagcgttat
     2881 gttaaacgaa accattgatt atttaaatgt aaaagaaaat ggtgtgtaca ttgactgtac
     2941 gctaggtgga gcgggacatg ccctttattt actaaatcaa ttaaatgacg acggaagatt
     3001 aatagcaatc gatcaagacc aaactgcaat tgataatgct aaagaggtat taaaggatca
     3061 tttgcataag gtgacttttg ttcatagcaa cttccgtgaa ttaactcaaa tattaaaaga
     3121 cttaaacatt gaaaaagtag atggaattta ttacgacttg ggtgtttcaa gcccacaact
     3181 cgacattcca gaacgaggat tcagttatca ccatgacgca acattagaca tgcgtatgga
     3241 ccaaacacaa gaactaacag catatgaaat tgttaacaat tggtcatatg aagcgttagt
     3301 gaagattttt tatcgctatg gcgaggagaa attttcaaaa cagatagctc gaagaatcga
     3361 agcacatcgc gaacaacaac caataacaac aacattagaa ttagttgaca ttataaaaga
     3421 aggtattcct gcaaaagcaa gaagaaaagg cggacatcct gcaaaacgag tatttcaagc
     3481 actacgaatt gcagtaaacg atgaattgtc agcttttgaa gattcaatag aacaagcgat
     3541 tgaattagtg aaagtagatg gcaggatttc ggtaatcact ttccattctt tagaagatcg
     3601 tttatgtaaa caggtgttcc aagaatatga aaaaggtcca gaggtaccaa gaggattacc
     3661 agttatacca gaagcatata cacctaagtt aaagcgtgtt aatcgtaaac cgattaccgc
     3721 tacagaagaa gatttagatg acaataacag agcacgaagc gcgaaattac gtgtagctga
     3781 aatacttaaa taaggagcaa tttataatgg ctgtagaaaa agtgtaccaa ccatatgacg
     3841 aacaagttta taatagtata ccgaagcaac aaccacaaac taagcccgaa aagaagtctg
     3901 tttcgagaaa agtggttgta caattaacta aatttgaaaa agttttatac ataactttga
     3961 ttactgtaat tgctatgtta agtatttata tgctatcttt aaaaatggat gcgtatgata
     4021 cgcgaggaaa gattgcagat ttagattata aaatagataa acaatcaagt gaaaacagtg
     4081 ctttacaatc tgaaatcaaa aagaattctt cttatgaacg catatacgaa aaggctaaga
     4141 aacaggggat gagccttgag aacgataatg taaaggtagt gcgtagtaat ggcgaagcaa
     4201 aaaattaaaa ttaaaaaaaa taaaataggg gcagtcctac ttgttggttt attcggactg
     4261 ctctttttta tattggtttt aagaatttca tatatcatga ttactggaca ttctaatggt
     4321 caagatttag tcatgaaggc aaatgaaaag tatttagtta agaatgcaca acaaccagaa
     4381 cgaggaaaga tatatgatcg taatggtaaa gtgctagcag aagatgtaga aagatataaa
     4441 cttgttgcag taatagataa aaaggcgagt gccaattcta aaaaacctag gcatgtagtt
     4501 gataaaaaag agactgcaaa gaaattatct acagtcatta atatgaagcc agaggaaatt
     4561 gaaaagagac ttagtcaaaa gaaagctttc caaattgaat ttggacgcaa aggaacaaat
     4621 ttaacgtatc aggacaaatt gaaaatagag aaaatgaatt tgcctggtat ttctttattg
     4681 cctgaaacag aacgctttta tccaaatggc aattttgcat cacacttaat tggtagagct
     4741 cagaaaaatc cggatactgg tgaacttaaa ggtgcacttg gagttgaaaa gatttttgat
     4801 agttatttaa gtggatctaa aggatcattg agatatattc atgatatttg gggatatatc
     4861 gcaccaaata ctaaaaaaga gaagcagcct aaacgtggtg atgatgtcca tttaacaatc
     4921 gattcaaata ttcaagtatt tgttgaagaa gctttagatg gcatggttga aagataccag
     4981 ccgaaagatt tatttgcggt tgtcatggat gccaaaactg gagaaatttt agcatacagt
     5041 cagcgaccaa catttaatcc tgaaactggt aaagactttg gtaaaaagtg ggcaaatgac
     5101 ctttatcaaa acacatacga gcctggatca acatttaaat catatgggtt agcagctgct
     5161 attcaagaag gtgcttttga tcctgataag aaatataaat ctggacatag agatattatg
     5221 ggttcacgta tttcagactg gaatagagtc ggttggggtg aaattccaat gtcactcgga
     5281 tttacttatt catctaatac attgatgatg catttacaag atttagttgg tgcagacaaa
     5341 atgaaatctt ggtatgaacg atttggattt ggaaaatcaa ctaaaggtat gtttgatgga
     5401 gaagcacctg gtcaaattgg atggagtaat gagttgcaac aaaaaacgtc atcatttggt
     5461 caatcgacaa cagtaacacc tgttcaaatg ttacaagcgc aatcagcgtt ctttaatgat
     5521 ggtaatatgt taaaaccatg gtttgtgaat agcgttgaaa atcctgttag taaaagacaa
     5581 ttttataaag ggcaaaaaca aatcgcaggc aaaccaataa caaaagatac tgctgaaaaa
     5641 gttgaaaagc aattggattt agttgtgaat agtaagaaga gtcacgctgc aaactatcgt
     5701 attgatggtt atgaggtcga aggtaagact ggtacagcac aagtcgctgc acctaatggt
     5761 ggtggatacg ttaaaggtcc aaacccatat tttgtaagtt ttatgggtga cgcgccgaag
     5821 aaaaatccta aagttattgt atacgctggt atgagcttgg cacaaaaaaa tgaccaagaa
     5881 gcttatgaat taggtgttag taaagcgttt aaaccaataa tggaaaatac tttgaaatat
     5941 ttaaatgtag gtaaatcaaa agatgacaca tctaatgcag agtatagtaa agtgccagat
     6001 gttgaaggtc aagacaaaca aaaagctatt gataatgtga gtgcaaaatc attagaacca
     6061 gttactattg gttctggcac acaaataaaa gcacaatcta taaaagcagg gaataaagtc
     6121 ttacctcata gtaaagtact gttattaaca gatggagact taactatgcc tgacatgtca
     6181 ggatggacga aagaagatgt cattgctttt gaaaacctaa caaatattaa agtaaattta
     6241 aaaggtagcg gttttgtgtc ccaccaatca attagtaagg gacaaaaact tactgaaaaa
     6301 gataaaatag acgtagaatt ttcatcagag aatgtagaca gcaattcgac gaataattct
     6361 gattcaaatt cagatgataa gaagaaatct gacagtaaaa ctgacaagga taagtcggac
     6421 taacaagaat ggctacatta aattaggatg tattgtcact atttgttttt actaaagtaa
     6481 tgctgtgata gaaaacaaca tcttcattta atctttataa ataagtgttg atagagaatt
     6541 ttaaggtaga cgaggtcaga ttaacttgtt tgttataggc aaacttttta tactggcctc
     6601 ttatgccgta aaaaagaaaa attataaatt ttgattacaa ctttgtttat ttaattgaaa
     6661 aattgataat atattagtgg ttaaaaaagt ctggattaag aagaggagat agttatgatt
     6721 tttgtatatg cgttattagc gctagtgatt acatttgttt tggtacctgt tttaatacct
     6781 acattaaaaa ggatgaaatt tggtcaaagt attcgagaag aaggtccaca aagccatatg
     6841 aagaagactg gtacaccaac gatgggtgga ctaacatttc tattaagtat tgtgataacg
     6901 tctttggtgg ctattatatt tgtagatcaa gctaatccaa tcatactgtt attatttgtg
     6961 acgattggtt ttgggttaat tggttttata gatgattata ttattgttgt taaaaagaat
     7021 aaccaaggtt taacaagtaa acagaagttt ttggcgcaaa ttggtattgc gattatattc
     7081 tttgttttaa gtaatgtgtt tcatttggtg aatttttcta cgagcataca tattccattt
     7141 acgaatgtag caatcccact atcatttgca tatgttattt tcattgtttt ttggcaagta
     7201 ggtttttcta atgcagtaaa tttaacagat ggtttagatg gattagcaac tggactgtca
     7261 attatcggat ttacaatgta tgccatcatg agctttgtgt taggagaaac ggcaattggt
     7321 attttctgta tcattatgtt gtttgcactt ttaggatttt taccatataa cattaaccct
     7381 gctaaagtgt ttatgggaga tacaggtagc ttagctttag gtggtatatt tgctaccatt
     7441 tcaatcatgc ttaatcagga attatcatta atttttatag gtttagtatt cgtaattgaa
     7501 acattatctg ttatgttaca agtcgctagc tttaaattga ctggaaagcg tatatttaaa
     7561 atgagtccga ttcatcatca ttttgaattg ataggatgga gcgaatggaa agtagttaca
     7621 gtattttggg ctgttggtct gatttcaggt ttaatcggtt tatggattgg agtgcattaa
     7681 gatgcttaat tatacagggt tagaaaataa aaatgtatta gttgtcggtt tggcaaaaag
     7741 tggttatgaa gcagctaaat tattaagtaa attaggtgcg aatgtaactg tcaatgatgg
     7801 aaaagactta tcacaagatg ctcatgcaaa agatttagaa tctatgggca tttctgttgt
     7861 aagtggaagt catccattaa cgttgcttga taataatcca ataattgtta aaaatcctgg
     7921 aataccttat acagtatcta ttattgatga agcagtgaaa cgaggtttga aaattttaac
     7981 agaagttgag ttaagttatc taatctctga agcaccaatc atagctgtaa cgggtacaaa
     8041 tggtaaaacg acagttactt ctctaattgg agatatgttt aaaaaaagtc gcttaactgg
     8101 aagattatcc ggcaatattg gttatgttgc atctaaagta gcacaagaag taaagcctac
     8161 agattattta gttacagagt tgtcgtcatt ccagttactt ggaatcgaaa agtataaacc
     8221 acacattgct ataattacta acatttattc ggcgcatcta gattaccatg aaaatttaga
     8281 aaactatcaa aatgctaaaa agcaaatata taaaaatcaa acggaagagg attatttgat
     8341 ttgtaattat catcaaagac aagtgataga gtcggaagaa ttaaaagcta agacattgta
     8401 tttctcaact caacaagaag ttgatggtat ttatattaaa gatggtttta tcgtttataa
     8461 aggtgttcgt attattaaca ctgaagatct agtattgcct ggtgaacata atttagaaaa
     8521 tatattagca gctgtgcttg cttgtatttt agctggtgta cctattaaag caattattga
     8581 tagtttaact acattttcag gaatagagca tagattgcaa tatgttggta ctaatagaac
     8641 taataaatat tataatgatt ccaaagcaac aaacacgcta gcaacacagt ttgccttaaa
     8701 ttcatttaat caaccaatca tttggttatg tggtggtttg gatcgaggga atgaatttga
     8761 cgaactcatt ccttatatgg aaaatgttcg cgcgatggtt gtattcggac aaacgaaagc
     8821 taagtttgct aaactaggta atagtcaagg gaaatcggtc attgaagcga acaatgtcga
     8881 agacgctgtt gataaagtac aagatattat agaaccaaat gatgttgtat tattgtcacc
     8941 tgcttgtgcg agttgggatc aatatagtac ttttgaagag cgtggagaga aatttattga
     9001 aagattccgt gcccatttac catcttatta aagggtgtga gtattgatgg atgataaaac
     9061 gaagaacgat caacaagaat caaatgaaga taaagatgaa ttagaattat ttacgaggaa
     9121 tacatctaag aaaagacggc aaagaaaaag atcaaaggct acacattttt ctaatcaaaa
     9181 taaagatgat acatctcaac aagctgattt tgatgaagaa atttacttga taaataaaga
     9241 cttcaaaaaa gaagaaagca atgataaaaa taatgattct gcttctagtc atgcgaatga
     9301 taataatatc gatgattcta cagactctaa tattgaaaat gaggattata gatataatca
     9361 agaaattgac gaccaaaatg aatcgaatgt aatttcagtc gacaacgaac aacctcaatc
     9421 agctcctaaa gaacaaaata gcgactcgat tgatgaggaa acagtaacga aaaaagaacg
     9481 aaaaagtaaa gtaacacaat taaagccatt aacacttgaa gaaaagcgga agttaagacg
     9541 taagcgacaa aagcgaatcc aatacagtgt tattacaata ttggtattgt tgattgctgt
     9601 tatattaatt tacatgtttt caccacttag taaaattgcg catgtaaata taaatggaaa
     9661 taatcacgtt agtacttcaa agataaacaa agttttaggt gttaaaaatg attcaaggat
     9721 gtatacgttt agtaaaaaaa atgctattaa tgatctcgaa gagaatccat taatcaaaag
     9781 tgttgagata cacaagcaat taccaaacac attaaacgta gatatcacag aaaatgaaat
     9841 tattgcttta gtgaaatata aaggtaaata tttaccttta ttagaaaatg gtaaattgct
     9901 taaaggttca aatgatgtca aaattaatga tgcacctgtc atggatggtt tcaaaggtac
     9961 aaaagaagat gatatgatta aggcgttatc tgaaatgaca cctgaagtta gacgatatat
    10021 tgccgaagtg acatacgccc caagtaaaaa caaacaaagc agaattgaat tgtttacgac
    10081 agatggactt caagtaatcg gtgatatttc gacgatatct aagaaaatga aatattatcc
    10141 gcagatgtca caatcattat caagggatag ttcgggtaaa ctaaaaacac gaggctatat
    10201 tgatttatca gtcggtgctt catttatccc ataccgtgga aacacgtcta gtcaatcaga
    10261 aagcgataaa aatgtgacta aatcatctca agaggaaaat caagcaaaag aagaattaca
    10321 aagcgtttta aacaaaatta acaaacaatc aagtaagaat aattaaaaaa ttttgatatt
    10381 gtctatgttt atagttcaca agccattcaa cgtattgtaa actaaggata gtgtattttt
    10441 ttaatagtaa tttgtcagga ggtgcctatc tatggaagaa cattactacg taagtattga
    10501 tattggatca tcaagcgtaa aaacaatagt aggcgagaaa tttcacaatg gtataaatgt
    10561 gataggtaca ggacaaacct acacgagcgg tataaaaaat ggtttaattg atgattttga
    10621 tattgcgcga caagcaatca aagacacaat taaaaaggca tcaatcgctt cgggtgttga
    10681 tattaaagaa gttttcctga aattacctat cattggaacg gaagtttatg atgaatcaaa
    10741 tgaaatcgac ttttatgagg atacagaaat caacggttca catatcgaaa aagtattaga
    10801 aggtattaga gaaaaaaatg atgtgcaaga aacagaagta attaatgtgt tcccgattcg
    10861 ttttatagtc gataaagaaa atgaggtttc agaccctaaa gaattaattg ccagacattc
    10921 attaaaggtt gaagcaggcg taattgctat tcaaaaatcg attttaatta atatgattaa
    10981 atgcgtagaa gcatgtggtg ttgatgtatt agatgtttac tctgatgcat ataactatgg
    11041 ttcaatccta acagctactg aaaaagagtt aggtgcatgt gtcattgata ttggtgaaga
    11101 cgttacgcaa gttgcttttt atgaacgcgg tgaattagta gatgctgatt ctatcgaaat
    11161 ggcagggcgt gatattacag acgatattgc acaaggatta aacacttctt atgaaactgc
    11221 tgaaaaagtt aaacaccaat atggtcatgc attctatgat tctgcttcag atcaagatat
    11281 cttcactgtt gaacaggttg atagtgatga aacagtacag tatactcaaa aagatttgag
    11341 tgactttatt gaagcgcgtg tagaagaaat attcttcgaa gtatttgatg ttttacaaga
    11401 tttaggatta acaaaagtaa atggtgggtt tattgtaact ggtggatctg caaacttact
    11461 tggcgtaaaa gaattattat cagatatggt aagtgaaaaa gttagaattc acacgccatc
    11521 acaaatggga attagaaaac ctgaattttc ttcagcaatt tctacaattt ctagtagtat
    11581 cgcttttgat gagttattag attatgttac aattaattat catgataatg aagaaactga
    11641 agaagatgtt attgatgtga aagacaaaga taacgaatct aaattaggcg gatttgattg
    11701 gtttaaacgt aaaacaaaca aaaaagatac tcatgaaaat gaagtagagt caacagatga
    11761 agaaatttat caatcagaag ataatcatca ggaacataaa cagaatcatg aacatgttca
    11821 agacaaagat aaagataaag aagaaagtaa attcaaaaaa ctaatgaaat ctctatttga
    11881 atgattattg gccaataaaa ctaggaggaa atttaaatgt tagaatttga acaaggattt
    11941 aatcatttag cgactttaaa ggtcattggt gtaggtggtg gcggtaacaa cgccgtaaac
    12001 cgaatgattg accacggaat gaataatgtt gaatttatcg ctatcaacac agacggtcaa
    12061 gctttaaact tatctaaagc tgaatctaaa atccaaatcg gtgaaaaatt aacacgtggt
    12121 ttaggagcag gagctaatcc tgaaatcggt aaaaaagctg cagaggaatc tcgtgaacaa
    12181 attgaagatg caatccaagg tgcagacatg gtatttgtta cttctggtat gggtggcgga
    12241 actggtactg gtgcagcacc agtcgttgct aaaattgcaa aagaaatggg cgcattaact
    12301 gttggtgttg taactcgtcc atttagtttt gaaggacgta aacgtcaaac tcaagctgct
    12361 gctggagtag aagctatgaa agctgcagta gatacattaa tcgttatacc aaatgaccgt
    12421 ttattagata tcgttgacaa atctacgcca atgatggaag catttaaaga agctgacaac
    12481 gtgttacgcc aaggtgtaca aggtatctca gacttaatcg ctgtttctgg tgaagtaaac
    12541 ttagactttg cagacgttaa gacaattatg tctaaccaag gttctgcatt aatgggtatt
    12601 ggtgtttctt ctggtgaaaa tagagcggta gaagctgcta aaaaagcaat ctcttctcca
    12661 ttacttgaaa catctatcgt tggtgcacaa ggtgtgctta tgaatattac tggtggcgag
    12721 tcattgtcat tatttgaagc acaagaggct gctgatattg tccaagatgc tgcagatgaa
    12781 gacgttaata tgattttcgg tacagttatt aatcctgaat tacaagatga gattgttgta
    12841 acagttattg caactggttt tgatgacaaa ccaacatcac atggtcgtaa atctggtagc
    12901 actggattcg gaacaagcgt aaatacttct agcaatgcaa cttctaaaga tgaatcattc
    12961 acttcaaatt catcaaatgc acaagcaact gatagtgtaa gtgaaagaac acatacaact
    13021 aaagaagatg atattcctag cttcattaga aatagagaag aaagacgttc aagaagaaca
    13081 agacgttaat cggttaatat atatacacaa ataattcaac acaaa
//
LOCUS       DALPQQ010000068        12969 bp    DNA     linear   BCT 22-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus strain K18-6-464
            SAMD00233528-rid16434743.denovo.068, whole genome shotgun sequence.
ACCESSION   DALPQQ010000068 DALPQQ010000000
VERSION     DALPQQ010000068.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMD00233528
            Sequence Read Archive: DRR236061
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 12969)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 12969)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001543423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001543423.1
            Genome Coverage       :: 77x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/22/2022 17:09:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,811
            CDSs (total)                      :: 2,743
            Genes (coding)                    :: 2,689
            CDSs (with protein)               :: 2,689
            Genes (RNA)                       :: 68
            rRNAs                             :: 2, 4, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 4, 2 (16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 54
            CDSs (without protein)            :: 54
            Pseudo Genes (ambiguous residues) :: 0 of 54
            Pseudo Genes (frameshifted)       :: 27 of 54
            Pseudo Genes (incomplete)         :: 27 of 54
            Pseudo Genes (internal stop)      :: 10 of 54
            Pseudo Genes (multiple problems)  :: 10 of 54
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..12969
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMD00233528-rid16434743.denovo.068"
                     /strain="K18-6-464"
                     /db_xref="taxon:1280"
                     /geo_loc_name="Japan: Niigata"
     gene            complement(30..857)
                     /locus_tag="O7798_001625"
     CDS             complement(30..857)
                     /locus_tag="O7798_001625"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500385.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HDC2863884.1"
                     /translation="MWKWEAENDAKGVVVIAHNILEHTGRYAYVITMLRRNGYHVIMG
                     DLPGQGQTSRANKGQIENFQTYHESLLDWLKIANEYKIPTYVLGVGLGGLILLNLLEK
                     VELPIEGMMLISPMLELQKNGKNRKDKLVSNIGKISKDTRFNVGVEPKDLTRNLEIVE
                     ETVNDGLMLKKATYHWYNTINETMKDTMAHIHDIQPMPTLLMYGTKDLIVDTRAIDEF
                     KEKYQTPELYFKAWQGFYHEVHNEPERDEVMRYILTFLNNSVNTMGFIVEDDEIVEI"
     gene            complement(860..979)
                     /locus_tag="O7798_001626"
     CDS             complement(860..979)
                     /locus_tag="O7798_001626"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500386.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDC2863885.1"
                     /translation="MMLISFIYNNMDNNNTINRNLHSEFAIIMLLKINEKGAV"
     gene            1091..2092
                     /locus_tag="O7798_001627"
     CDS             1091..2092
                     /locus_tag="O7798_001627"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500387.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="proline dehydrogenase"
                     /protein_id="HDC2863886.1"
                     /translation="MALLKNFFIGLSNNSFLNNAAKKVGPRLGANKVVAGNTIPELIN
                     TIEYLNDKNIAVTVDNLGEFVGTVEESNHAKEQILTIMDALHQHGVKAHMSVKLSQLG
                     AEFDLELAYQNLREILLKANTYNNMHINIDTEKYASLQQIVQVLDRLKGEFRNVGTVI
                     QAYLYDSHELVDKYQDLRLRLVKGAYKENESIAFQSKEDVDANYIKIIEQRLLNARNF
                     TSIATHDHRIINHVKQFMKENHIEKDRMEFQMLYGFRSELAEEIANEGYNFTIYVPYG
                     DDWFAYFMRRLAERPQNLSLAVKEFVKPAGLKRVGIIAALGATVMLGLSTIKKLCRK"
     gene            complement(2214..2678)
                     /locus_tag="O7798_001628"
     CDS             complement(2214..2678)
                     /locus_tag="O7798_001628"
                     /EC_number="2.5.1.78"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500388.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="6,7-dimethyl-8-ribityllumazine synthase"
                     /protein_id="HDC2863887.1"
                     /translation="MNFEGKLIGKDLKVAIVVSRFNDFITGRLLEGAKDTLIRHDVNE
                     DNIDVAFVPGAFEIPLVAKKLASSGNYDAVITLGCVIRGATSHYDYVCNEVAKGVSKV
                     NDQTNVPVIFGILTTESIEQAVERAGTKAGNKGAEAAVSAIEMANLLKSIKA"
     gene            complement(2691..3872)
                     /gene="ribB"
                     /locus_tag="O7798_001629"
     CDS             complement(2691..3872)
                     /gene="ribB"
                     /locus_tag="O7798_001629"
                     /EC_number="4.1.99.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500389.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3,4-dihydroxy-2-butanone-4-phosphate synthase"
                     /protein_id="HDC2863888.1"
                     /translation="MQFDNIDSALMALKNGEPIIVVDDENRENEGDLVAVTEWMNDNT
                     INFMAKEARGLICAPVSKDIAQRLDLVQMVDDNSDIFGTQFTVSIDHVDTTTGISAYE
                     RTLTAKKLIDPSSEAKDFNRPGHLFPLVAQDKGVLARNGHTEAAVDLAKLTGAKPAGV
                     ICEIMNDDGTMAKGQDLQKFKEKHQLKMITIDDLIEYRKKLEPEIEFKAKVKMPTDFG
                     TFDMYGFKATYTDEEIVVLTKGAIRQHENVRLHSACLTGDIFHSQRCDCGAQLESSMK
                     YINEHGGMIIYLPQEGRGIGLLNKLRAYELIEQGYDTVTANLALGFDEDLRDYHIAAQ
                     ILKYFNIEHINLLSNNPSKFEGLKQYGIDIAERIEVIVPETVHNHDYMETKKIKMGHL
                     I"
     gene            complement(3883..4515)
                     /locus_tag="O7798_001630"
     CDS             complement(3883..4515)
                     /locus_tag="O7798_001630"
                     /EC_number="2.5.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500390.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="riboflavin synthase"
                     /protein_id="HDC2863889.1"
                     /translation="MFTGIVEEKGVVKSVQIRQSVRTIEIEAHKITADMHIGDSISVN
                     GACLTVIDFNQTSFTVQVIKGTENKTYLADVKRQSEVNLERAMSGNGRFGGHFVLGHV
                     DELGTVSKINETANAKIITIQCSQHINNQLVKQGSITVDGVSLTVFDKHDNSFDIHLI
                     PETRRSTILSSKKLGDKVHLETDVLFKYVENILNKDKDQLSVDKLRAFGF"
     gene            complement(4522..5565)
                     /gene="ribD"
                     /locus_tag="O7798_001631"
     CDS             complement(4522..5565)
                     /gene="ribD"
                     /locus_tag="O7798_001631"
                     /EC_number="1.1.1.193"
                     /EC_number="3.5.4.26"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015581873.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional
                     diaminohydroxyphosphoribosylaminopyrimidine
                     deaminase/5-amino-6-(5-phosphoribosylamino)uracil
                     reductase RibD"
                     /protein_id="HDC2863890.1"
                     /translation="MSQFMDYAIQLANMVQGQTGVNPPVGAVVVKEGRIVGIGAHLRK
                     GDKHAEVQALDMAQQNAEGATIYITLEPCSHFGSTPPCVNKIIDCKIAKVVYATKDNS
                     LDTHGDETLRAHGIEVECVDDERASQLYQDFFKAKAKQLPQITVKVSASLDGKQANDN
                     GQSQWITNKEVKQDVYKLRHRHDAVLTGRRTVELDDPQYTTRIQDGKNPIKVILSKSG
                     NIHFNQQIYQDESTPIWIYTENPNLTTNQTHIEIIYLKSCDLTTILHNLYKRGVGTLL
                     VEAGPTTTSEFLQSNYIDEFILYYAPKLIGGSGNYQFYQTNDVIEIPDANQFEIVHSE
                     LLNQNVKLTLRKK"
     regulatory      complement(5692..5827)
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00050"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="FMN riboswitch; Derived by automated computational
                     analysis using gene prediction method: cmsearch."
                     /bound_moiety="flavin mononucleotide"
                     /db_xref="RFAM:RF00050"
     gene            complement(6046..7548)
                     /locus_tag="O7798_001632"
     CDS             complement(6046..7548)
                     /locus_tag="O7798_001632"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500392.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD/NAD(P)-binding protein"
                     /protein_id="HDC2863891.1"
                     /translation="MRVAIIGMGTAGVSVLRELVKHPKFNQLDIDLYDDKVNMGQGVP
                     FQNDSSELLINMPSKKMSLNLDDETEFWKWYKQQTDFNFDEPAYLPRFVFGHYMKSYL
                     SMFTKKYPNISTNYNKVQEIYTNSNIDETNLTYYICTTNSGQSWQAYDYVFLTCGTFA
                     YHDPYNLKGKKGYIATPYPTYNTLDEVNELDDIAIIGTGLASLDVVRYVAAHHPKLPI
                     TMTSRSAHLPSVRGTMIDVTFKYLTKDKLNDIKKHHFGNAPLDTLVSLFLKECAEYDI
                     DFKKLVHRRTGNHIADLKYDLARPTEMGIFQSMIEHLKENLNWIWNSLSIEDQHQFNQ
                     KYSKMIQLNSNPMPPRTAELIIELIENKSLILKKDLEDVKHDGKLYYFSYKNQESVDI
                     YNVVINATGAKSHLNELDQDDQLIRNLENRQIVQAHPMGGIQIIPETNQVISPRFGTL
                     TNMIAIGQMTNGVNKLRNGVKMIVEQVAHTVSQLYDALESNEQQQRSDNQ"
     gene            8071..8385
                     /locus_tag="O7798_001633"
     CDS             8071..8385
                     /locus_tag="O7798_001633"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500393.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="winged helix-turn-helix transcriptional
                     regulator"
                     /protein_id="HDC2863892.1"
                     /translation="MTYKELATFLKVLSDSSRLEILDLLSCGELCACDLLAHFQFSQP
                     TLSYHMKALVKTNLVTTRKIGNKHLYQLNHNIFESVINNLSKVHTSNQRCICHNLNTG
                     EC"
     gene            8385..9677
                     /gene="arsB"
                     /locus_tag="O7798_001634"
     CDS             8385..9677
                     /gene="arsB"
                     /locus_tag="O7798_001634"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500394.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arsenite efflux transporter membrane subunit
                     ArsB"
                     /protein_id="HDC2863893.1"
                     /translation="MMTTLATLIFLVTLLFVLWQPKGLDIGITALTGAFIAVITGVVS
                     FSDVFEVTGIVWNATLTFVSVILISLILDKVGLFEWSAIHMLHASKGNGLKMFVYIIL
                     LGAIVAAFFANDGAALILTPIVLAMVKNIGFSKRAIFPFIIASGFIADTTSLPLIVSN
                     LVNIISADYFHVGFVRYFSRMIIPNLFSLLASIIVLWLYFRKAIPKTFDDNNIKHPKD
                     AINDLKLFKISWIVLVILLFGYLISEFTKIPVSIFTGIIAFIFLMLARKSNAVNIKQV
                     IKGAPWNIVLFSIGMYIVVFGLRNAGITLILAKILEYISNYGLFSTILGMGFISAFLS
                     SIMNNMPTVLIDAIAIGQSNVHGMLKEGLIYANVIGSDLGPKITPIGSLATLLWLHVL
                     TQKDVKISWGTYFKTGIIITIPVLFITLIGLYLTLIIF"
     gene            9695..10090
                     /gene="arsC"
                     /locus_tag="O7798_001635"
     CDS             9695..10090
                     /gene="arsC"
                     /locus_tag="O7798_001635"
                     /EC_number="1.20.4.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500395.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arsenate reductase (thioredoxin)"
                     /protein_id="HDC2863894.1"
                     /translation="MTKKTIYFICTGNSCRSQMAEGWAKQILADDWNVYSAGIETHGV
                     NPKAIEAMKEVGIDISNHTSDLIDNNIIKNSNLVVTLCSDADVNCPSLPTNVKKEHWG
                     FDDPAGKPWSEFQRVRDEIKIAIENFKSR"
     gene            complement(10385..11239)
                     /locus_tag="O7798_001636"
     CDS             complement(10385..11239)
                     /locus_tag="O7798_001636"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500396.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetylglucosaminidase"
                     /protein_id="HDC2863895.1"
                     /translation="MNKHKKGSIFGIIGLVVIFAVVSFLFFSMISDQIFFKHVKSDIK
                     IEKLNVTLNDAAKKQINNYTSQQVSNKKNDAWRDASATEIKSAMDSGTFIDNEKQKYQ
                     FLDLSKYQGIDKNRIKRMLVDRPTLLKHTDDFLKAAKDKHVNEVYLISHALLETGAVK
                     SELANGVEIDGKKYYNFYGVGALDKDPIKTGAEYAKKHGWDTPEKAISGGADFIHKHF
                     LSSTDQNTLYSMRWNPKNPGEHQYATDIKWAESNATIIADFYKNMKTEGKYFKYFVYK
                     DDSKHLNK"
     gene            complement(11515..11739)
                     /locus_tag="O7798_001637"
     CDS             complement(11515..11739)
                     /locus_tag="O7798_001637"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500397.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDC2863896.1"
                     /translation="MDYAHLNLEHFFARNDDLDVIRDRADFVMINNFTNEMMYRDGQI
                     EGTIDLNQYYYKNRSNAASFIMMDYKKETK"
     gene            11938..12408
                     /gene="sigS"
                     /locus_tag="O7798_001638"
     CDS             11938..12408
                     /gene="sigS"
                     /locus_tag="O7798_001638"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500398.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase sigma factor SigS"
                     /protein_id="HDC2863897.1"
                     /translation="MKFNDVYNKHHKIIHHLLKKYNISYNYDEYYQLLLIKMWQLSQI
                     YKPSSKQSLSSFLFTRLNFYLIDLFRQQNQLKDVILCENNSPTLTEQPTYFNEHDLRL
                     QDIFKLLNQRERLWLKLYLEGYKQFEIAEIMSLSLSTIKLIKMSVKRKCQHNFN"
     gene            12521..12964
                     /locus_tag="O7798_001639"
     CDS             12521..12964
                     /locus_tag="O7798_001639"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500399.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="competence protein ComK"
                     /protein_id="HDC2863898.1"
                     /translation="MQDNSTKYLLYIQTATSNHLETNCVFLHCDYILKVPINKLVSYY
                     AKLHLSSQSVLIETAKNILNINKLVPIYINPKTILFPLKHKRAPIQIYINAHYIVGMT
                     AIENSTLIHFQEGIQLEVDEPFSLVSKKCHESLALKHFIENTISN"
BASE COUNT         4203 a         2274 c         1804 g         4688 t
ORIGIN      
        1 gggatttatg tcccaacctt tttagaatat taaatttcta caatttcgtc atcttcaaca
       61 ataaagccca ttgtattgac gctgttattt aagaaagtca gaatataacg cattacttca
      121 tcacgttctg gctcattgtg aacctcgtgg taaaaacctt gccaagcttt aaaatataat
      181 tcaggtgttt gatatttttc tttaaactca tcaattgccc tagtatcaac aattaaatcc
      241 ttcgttccat acattaatag cgttggcatt ggttgaatgt catgaatatg agccatcgta
      301 tctttcatcg tctcattaat tgtattatac caatgatacg ttgctttttt taacattaaa
      361 ccatcgttaa ctgtttcttc aacaatttct aaattacgtg ttaaatcttt tggttctaca
      421 ccaacattaa aacgtgtgtc ttttgaaatt ttacctatat ttgaaacaag tttatcttta
      481 cgattttttc cattcttttg aagttctagc ataggagaaa ttaacatcat cccctcgatt
      541 ggcaattcta ctttttcaag taaatttaat aaaatcaaac cgccaagtcc tacccctaat
      601 acataagtag gaattttata ttcattagct atctttaacc agtctagcaa actttcgtga
      661 tacgtttgaa agttttcaat ttgtccttta ttagctcttg aagtttgacc ttgaccaggc
      721 aaatctccca taatcacatg atagccattt cttcttaaca tcgtaataac atatgcatat
      781 cttcccgtat gttctaatat attatgagca ataacaacga cgcctttcgc atcattttca
      841 gcttcccact tccacattat tatactgccc ctttttcatt aatcttcaat aacataatta
      901 tagcaaattc actatgtaga tttctattta tagtattatt gttgtccata ttattatata
      961 taaatgaaat caacatcaat aatagtgtaa ttatacataa ttatttttga ttgtttttga
     1021 tgaaaacgct ttctcaaata tttttttcat gctaaactta ttgtaaacac aagggtttgg
     1081 aggagtagca atggcactat taaagaattt ttttatcgga ttatctaata atagtttttt
     1141 aaacaacgca gcaaaaaaag tgggcccacg tttgggcgcc aataaagtcg ttgccggaaa
     1201 tacaattcca gagttaatta atacaatcga atacttaaat gacaagaata tcgctgttac
     1261 ggtagacaat ttaggggaat ttgtcggtac agttgaagaa agtaatcatg ctaaagaaca
     1321 aattttaaca attatggacg cgcttcatca acatggcgta aaggcacata tgtctgttaa
     1381 attgagtcag ttaggtgcag aattcgactt agaattagct taccaaaatt taagagagat
     1441 tttacttaaa gcaaatactt acaacaatat gcatataaat attgatactg aaaaatatgc
     1501 tagcctgcaa caaattgttc aagttttaga tcgcttaaaa ggcgaattta gaaatgttgg
     1561 tactgtaatt caagcatatt tatacgatag ccacgaatta gttgataagt accaagattt
     1621 acgattacgt ttggttaaag gtgcatataa agaaaacgaa tcaattgcat ttcaatctaa
     1681 ggaagacgta gatgcaaatt acatcaaaat aattgaacaa cgtttgttaa acgcacgcaa
     1741 tttcacttca attgcaacac atgaccatcg catcattaat catgtaaaac aatttatgaa
     1801 agaaaatcac attgaaaaag atcgtatgga attccaaatg ctctatggtt ttagatcaga
     1861 gttagcagaa gaaatcgcaa atgaaggcta taatttcact atttatgtac cttatggcga
     1921 tgattggttt gcgtatttta tgagaagatt agcagaacgc ccacaaaacc tatctcttgc
     1981 tgtaaaagaa tttgtgaaac ctgctggctt aaaacgtgtt ggcataattg cagctttagg
     2041 agctacagtt atgttaggtt taagtacaat taaaaaatta tgccgtaaat agagcaagac
     2101 ataaacaata atttaggagt ctggaacaat aatcaatgtt ctaggctcct aaatgttata
     2161 ttggcagttc tgaaacattt ataaatcttt gattatgaac tcacaacagt gctctatgct
     2221 tttatagatt ttaataaatt agccatttca attgcactta ctgctgcttc agcaccttta
     2281 ttgccagctt tcgtacctgc tctttccaca gcttgttcaa tactttcagt cgttaaaata
     2341 ccaaatatga ctggtacatt agtttgatca ttcactttag aaacaccttt cgcgacttca
     2401 ttacaaacat aatcataatg agacgtagca ccgcgaatta cgcatcctaa tgtaattact
     2461 gcatcataat ttcctgatga ggctaatttt ttagctacta aaggaatttc aaacgcacct
     2521 ggcacaaatg ctacatcaat attgtcttca ttaacatcat gtcgaatcaa agtatctttt
     2581 gcaccttcaa gtaatcttcc agtgataaaa tcattaaatc gactaactac gattgcaact
     2641 ttcaaatctt ttccaattaa tttaccttca aaattcatgt taaaatcctc ctatattaaa
     2701 tgacccattt ttattttttt cgtttccata taatcatgat tatgtaccgt ttctggtacg
     2761 ataacttcaa ttctttctgc aatatcaatg ccatattgtt ttaatccctc aaatttactt
     2821 ggattattac ttaataaatt gatatgttcg atgttaaaat attttaaaat ctgtgcagca
     2881 atatgataat ctcgcaaatc ttcatcaaaa cctaatgcta aatttgcagt tactgtatca
     2941 tatccttgct caattaattc atatgcgcgt aatttgttta acaatcctat gccacgacct
     3001 tcttgaggta gataaataat catgccacca tgttcattga tatacttcat agacgattca
     3061 agttgagcac cacaatcaca acgttgacta tggaaaatat cgcctgtaag gcacgcagaa
     3121 tgtaagcgta cattttcatg ttgtcgaatt gcaccttttg tcagtacaac tatctcttca
     3181 tctgtgtatg tcgctttaaa accatacata tcaaatgttc cgaaatctgt aggcattttc
     3241 acttttgcct taaattcaat ttctggttct aattttttac gatattcaat taaatcatca
     3301 atcgtaatca tctttaattg atgtttttct ttaaactttt gtaaatcttg tcctttcgcc
     3361 atcgtgccgt catcattcat aatctcacaa atgacaccag cgggcttggc accagtaagt
     3421 ttagctaaat caacagccgc ttctgtgtgt ccatttctag ctaatacgcc tttatcttgt
     3481 gctactaatg gaaataaatg accaggacga ttaaaatctt tagcttcact actaggatca
     3541 atgagctttt tggcagtcaa tgtacgttca taagcactaa ttcctgttgt tgtatctaca
     3601 tgatcaatac tcactgtaaa ttgcgtacca aagatgtcgg agttatcatc aaccatttgt
     3661 accaaatcca aacgttgtgc aatatcttta gacactggtg cgcatattaa tccccttgct
     3721 tctttcgcca taaaattaat ggtattatcg ttcatccatt cagtaaccgc tactaaatca
     3781 ccttcatttt cacgattctc atcatctact acaataattg gttctccatt ttttaaagcc
     3841 attaaagcac tgtcaatatt atcgaattgc atgctacccc tcctaaaaac caaatgctct
     3901 taatttatct acagataatt ggtctttatc tttatttaaa atattttcaa catatttaaa
     3961 caaaacgtct gtttctaaat gtactttatc tcctaatttt ttggatgata aaatcgttga
     4021 acgcctcgtt tctggaataa gatgaatgtc aaaactgtta tcatgcttat caaataccgt
     4081 tagactaaca ccatccacag taatagaccc ttgcttaact aactgattat taatatgttg
     4141 actacattga atcgtaataa tttttgcatt ggctgtttca tttatttttg aaactgttcc
     4201 tagttcatct acatgaccga ggacaaaatg tccaccaaac ctaccgttac cactcatggc
     4261 acgctctaaa tttacttctg attgtcgctt aacatctgct aaataggttt tattttcagt
     4321 gcctttaatt acttgaacag taaaagatgt ctgattaaaa tcaatcactg ttaaacatgc
     4381 accattaaca ctgatggaat caccaatatg catatctgcc gtaatcttat gtgcttcaat
     4441 ttcaatcgtc ctgactgatt gacgaatttg aacactttta acgacacctt tttcttcaac
     4501 gatgccagta aacatgcatc atcacttctt tcgtaaagtt aatttaacat tttgatttaa
     4561 taactcggaa tgaacaattt caaattggtt cgcatctggt atctcaatca catcatttgt
     4621 ttgataaaat tgataatttc cagatccgcc aattaatttc ggggcataat agagaataaa
     4681 ttcatctata taattagatt ggagaaattc tgaagtagtg gttggacctg cctcgactag
     4741 caaagttcca actcctcttt tatataaatt gtgaagaatt gttgttaaat cgcaagactt
     4801 caagtaaata atttcaatat gtgtttgatt ggttgttaaa tttggatttt cagtatatat
     4861 ccaaattggt gttgattcat cttgataaat ttgctgatta aaatgaatat tcccagactt
     4921 agacaatatt acttttatag ggttttttcc atcttgaata cgtgtagtat attgtggatc
     4981 atctaattca actgtacgtc ttccagttaa cactgcgtcg tgtcgatgtc ttaacttata
     5041 gacatcttgt ttaacctctt tgttagtaat ccattgactt tgtccattat cattcgcttg
     5101 tttaccatct aaacttgcag atactttcac tgtaatttgt ggcagttgct ttgcttttgc
     5161 tttaaaaaag tcttggtata attgtgatgc ccgttcatca tcaacgcatt caacctcaat
     5221 accgtgagcc cgtaacgtct catcaccatg tgtgtctaac gaattgtctt ttgttgcgta
     5281 tactactttt gctatcttac aatcaattat tttgttaaca cagggtggtg ttgaaccaaa
     5341 atgactacat ggctctaacg taatataaat cgtcgcacct tcagcatttt gttgtgccat
     5401 atcaagtgct tgaacctccg catgcttgtc accttttctc aagtgtgcac caataccaac
     5461 aatcctacct tctttaacta caacagcgcc aacgggtgga ttaacacctg tttgaccttg
     5521 taccatattt gcaagttgaa tcgcataatc cataaattga ctcaaatgat cacctctata
     5581 aacaaaaatc ctcacatcat gaattaagat gcaaggagaa aaatttatcg ttaaataagc
     5641 ctatttgtac acatttttac aaatacgcta cattatcttt gtcgataatt aacattcttt
     5701 ctcccatcca gactttaact gtcggctcta gaatctcact agatcagcca ctaatatgaa
     5761 acatattagc aggtcgcagg ctttatttac tgccggttgg gaatttcacc ctgccccgaa
     5821 agaattatat atgaaattgt tatagattat ttgagtacgt agtatgtcaa ctacatttaa
     5881 aatgatacta tatgttttct gaaaaaacaa ttaatgacgg ttttaattta atataatctg
     5941 agtactatag gcatctcatt gatatgattc ttactaacag acattaaaat caaaccttca
     6001 attcgtctct atagagcgtt ctctttatta tcttctagtt acaaattatt gattgtcact
     6061 gcgctgttgt tgctcattcg attctaaagc atcatataat tgagatactg tatgcgcaac
     6121 ttgttctaca atcattttca caccgtttcg tagtttatta acaccgtttg tcatttgacc
     6181 tatcgcaatc atatttgtta atgttccaaa ccttggacta ataacttgat tggtttccgg
     6241 aatgatttgt atgcctccca ttgggtgtgc ttgtacaatt tgtctatttt caagatttct
     6301 aattaattga tcatcttgat ccaattcatt taaatgactt tttgcacctg tcgcgttaat
     6361 gacaacatta tatatgtcta ctgattcttg gtttttgtat gaaaaataat acaacttgcc
     6421 atcatgtttc acatcttcta aatctttttt caaaattaaa gacttatttt ctattaattc
     6481 aataattagt tcagcagttc ttggaggcat tggatttgaa tttaattgaa tcatctttga
     6541 gtatttttga ttaaattgat gttggtcttc aatacttaag ctattccata tccaatttaa
     6601 attctctttc aaatgttcaa tcatactttg gaaaatgccc atttctgttg gacgcgctaa
     6661 atcatacttc aaatctgcaa tatgatttcc tgtacgtcta tgtactaatt ttttaaaatc
     6721 aatgtcatat tcagcacatt cttttaaaaa taaagaaact aaagtatcaa gcggtgcatt
     6781 gccgaaatga tgttttttaa tgtcatttaa tttgtcttta gttaagtact tgaatgtcac
     6841 gtctatcatt gtacctctta cacttggtaa atgagcagaa cgactcgtca tagtaattgg
     6901 taattttgga tgatgagcag caacataacg gacaacatct aaactggcaa ggcctgtacc
     6961 aataatcgca atatcgtcca gttcatttac ttcgtctaac gtattatatg ttggataagg
     7021 cgtagcgata tatccttttt taccctttaa gttatatgga tcatggtagg caaatgtacc
     7081 acatgttaaa aatacataat cgtacgcttg ccatgattgt cctgaatttg tagtacatat
     7141 gtaataagtt aaattcgttt catcgatatt agaatttgta taaatctctt gaactttatt
     7201 ataattagtt gatatatttg gatatttttt cgtgaacata gataaataag atttcatata
     7261 atgtccgaat acaaatctcg gtaaatatgc aggttcatca aaattaaaat cagtttgttg
     7321 tttataccac ttccaaaatt cagtctcatc atctaaattt aaactcatct ttttcgaagg
     7381 catattaatt agcagctcag aactatcatt ttgaaatggt acgccctgtc ccatatttac
     7441 tttatcatcg tataaatcta tatctaattg attaaacttc gggtgcttaa ctaactctct
     7501 caatacactt acaccagcag ttcccatgcc tattattgct acacgcatat atcatccatc
     7561 cttttgtaat tcaaaatatt atatttaaac tattacctat aattatagca atttggtatt
     7621 tccaataaaa tttattaagg taagctatta tttcactttc acaaccatta aaccatttaa
     7681 aacttttcat ttaatatcaa ccttagtgtt tgtgttaaaa tatttttaac gaggtgaatt
     7741 aaattgaaat ttatagcaaa gatattaatc tcattagtaa ttctatttat gatttttagt
     7801 cgtaaaaaca aagcttctta atcaataccc ttgattacaa aataaattca actaaggtga
     7861 ttggccatac actcaagata tggctaatca cctttttcaa tgcagaacaa agagtatatt
     7921 ttgcaaaatc aatatctata atttatcttt aatacccttt taatactaaa accaaattta
     7981 aattacatag tcatatcgtg taatatacca aaggaacata gacattcatc tatatagatg
     8041 ataatctatt taacgtctag gaggtatgtt atgacgtata aagaactagc aacattttta
     8101 aaagttttat cagattcaag cagattagaa atactagatt tactttcttg tggagagtta
     8161 tgcgcttgtg atttgttagc acattttcaa ttctctcaac ctacacttag ctatcatatg
     8221 aaagcattag taaaaaccaa cttagttacg acacgaaaaa tcggaaataa acatttatac
     8281 cagctcaatc ataatatttt tgagtccgta attaataact tgtctaaggt tcatacctct
     8341 aaccaacgat gtatttgtca taaccttaat actggtgaat gctaatgatg acaactttag
     8401 cgacactcat ttttctagta actttattat ttgtattatg gcaacctaaa ggcctagata
     8461 ttggcattac cgcactaact ggtgccttta ttgctgttat tactggtgtt gtaagttttt
     8521 ccgatgtttt cgaagtaaca ggtattgttt ggaatgctac tttgactttt gtctcagtca
     8581 ttcttatttc attaatatta gataaagttg gattattcga atggtcagct attcacatgc
     8641 ttcatgcttc aaaaggcaat ggtttaaaaa tgttcgttta tatcatatta ttgggtgcca
     8701 ttgttgctgc atttttcgca aatgatggcg cagcgttaat cttaacgcct attgtattag
     8761 cgatggttaa aaatataggt tttagtaagc gggccatatt cccttttatt attgcgagtg
     8821 gttttatagc tgacacaact tctttacctt taatcgtgag caatctagtg aatattatat
     8881 ctgctgatta ttttcatgta ggattcgttc gatattttag tagaatgatt atacctaatt
     8941 tattctcgct tttagcaagt attatagtat tgtggttata ttttagaaaa gcgataccta
     9001 aaacgtttga tgataataat ataaagcatc ctaaagatgc cattaatgat ttaaagctat
     9061 ttaaaatttc atggattgtt ctagttatat tacttttcgg ctatctaatc agtgaattta
     9121 ctaaaattcc ggtatcaatt ttcactggaa tcattgcttt tatttttcta atgttggctc
     9181 gtaaatcaaa tgctgtaaat attaagcaag tcattaaggg cgcaccttgg aatatagtat
     9241 tattttcaat tggtatgtat atcgtcgtat tcggcttaag aaatgctggc attactttaa
     9301 tattggctaa aatattagaa tatatttcca attacggtct atttagcact attttgggaa
     9361 tgggcttcat ttcagcgttt ttatcatcaa taatgaataa tatgcctaca gttttaatag
     9421 atgcgattgc tattggtcaa tcaaatgtcc atggcatgtt aaaagaaggc ctaatttatg
     9481 cgaatgttat cggttctgat ttaggtccaa aaattacacc gataggctct ttagctacat
     9541 tactgtggtt acacgtctta acacaaaaag atgttaagat ttcttggggc acatacttta
     9601 aaactggtat catcattaca attccagtac tatttataac cctcataggg ttgtatctaa
     9661 cacttatcat attttaatta attaggagat tgttatgact aaaaaaacaa tttattttat
     9721 atgtacaggc aactcatgtc gaagtcaaat ggctgaaggt tgggctaaac aaatcttagc
     9781 ggatgattgg aatgtatatt ctgctggtat cgaaacacac ggtgttaatc ccaaagcgat
     9841 agaagctatg aaagaagtag gcattgatat atcaaatcat acatcagatt taatcgataa
     9901 taatattatt aaaaattcaa atttagttgt tacattatgt agtgatgcag acgtaaattg
     9961 cccttcttta ccaacaaatg ttaagaaaga acattgggga tttgatgatc ctgcaggcaa
    10021 gccttggtca gagttccaac gtgtaagaga tgaaattaaa atcgcaattg aaaatttcaa
    10081 atcacgatga gagtgggaca gaaatgataa aaaaacacta atgatttatt atgtagtggt
    10141 tctttatcat tagctataac taatgtgtac ttaaaaatag gaatacatga gtaaaactca
    10201 tgcataagaa atactaattt ctaaagaaaa agtaattctt tatcgatgtc ctgccccact
    10261 tgcattggtg ggattatcaa tcaatgtgtt ttctctaatg caaaaagacg ctttctatca
    10321 aaacaagata gaaagcgtct ttttagtatg tccgagtcat aaaaacaact cgtagcttat
    10381 caaattactt attcaaatgt ttactgtcat ctttatacac aaagtatttg aagtattttc
    10441 cttcagtctt catgttctta taaaagtcag cgataattgt tgcattactt tctgcccact
    10501 taatatctgt agcatattga tgttctcctg gattttttgg attccatctc atactataca
    10561 atgtattttg atctgtgctt gataagaagt gcttatgaat gaaatcagca ccgcctgaaa
    10621 tagctttttc aggtgtatcc caaccatgct ttttagcata ttctgcacct gttttaattg
    10681 ggtctttatc aagggctcct actccataga aattgtagta ctttttgcca tcaatttcga
    10741 ctccattagc taattcactt ttaactgcgc cagtttctaa taatgcatgt gaaattaaat
    10801 aaacttcgtt aacgtgctta tctttagcag cttttaagaa atcatccgta tgtttcaata
    10861 acgttggtct atctactaac atacgtttaa ttctattttt atcaatccct tgatactttg
    10921 ataaatctaa aaattgatat ttttgctttt cattatcgat aaaagtaccg ctatccattg
    10981 cacttttaat ttcagttgca gatgcatctc tccatgcatc attcttttta tttgatacct
    11041 gttgactcgt ataattattt atttgtttct ttgctgcatc gtttaatgta acatttaact
    11101 tttcaatctt aatgtcggat ttaacatgtt tgaaaaatat ctgatcggat atcattgaga
    11161 aaaataaaaa tgagacaaca gcaaatatga caacaagtcc tattattcca aaaatagaac
    11221 ctttcttgtg tttattcata tccacacctc ttaggtcatt gttgttatac attcagtttg
    11281 actacgataa taaagtttaa cattattaaa accgtttaac aattttatct atgcattgtt
    11341 acatattcat aaataaacag taatgtaaat gaaacgtttt aaaccattta tcaacattac
    11401 tttacgttga tctacgaatc ataaatgttt tatctttttg tataaccttt gaaaaccttt
    11461 atatcaataa tcttattatt cacgtattaa aaaacaaaaa attcttttgt tcgtttactt
    11521 agtttctttt ttataatcca tcataataaa acttgctgca tttgatctat ttttataata
    11581 gtactgattt aaatcaatcg tgccttcaat ttgaccatca cgatacatca tttcattagt
    11641 gaagttattt atcatcacga aatcagcgcg atctcttata acatctaaat cgtcgtttcg
    11701 tgcaaaaaaa tgttctaaat ttaaatgtgc gtaatccatt gttacctccc gattacaaat
    11761 tttgttctat ctactattta gcaaagtaat aatacatcat atcacattaa attaattact
    11821 tatgtcttat atttaacact taatttagcg attacgcaaa tgaatgattt ttctaaatat
    11881 tttattctaa ctttatccgg aaatatttgt tatacgtata acttggagaa tgactacttg
    11941 aaatttaatg acgtatacaa caaacaccac aaaatcatac accatctttt aaaaaaatat
    12001 aatattagct ataattatga tgagtattat caactactct tgataaaaat gtggcaattg
    12061 agtcagatat ataaaccctc aagcaagcaa tctttatcct cttttttatt cactcgatta
    12121 aatttttacc ttatcgattt attcagacaa caaaatcaat taaaagatgt cattttatgt
    12181 gagaataatt caccaacatt aactgaacaa ccaacatact ttaatgaaca tgaccttcgt
    12241 ttacaagata tcttcaagct tttaaatcaa agagaaagac tatggctcaa actatacctt
    12301 gaaggataca agcaatttga aattgctgaa atcatgtcat tatcgctttc aacgattaaa
    12361 ttaattaaga tgtccgttaa gcgtaaatgc caacataatt ttaattagtt tattgtgaaa
    12421 tttcggtcga tgtgttaatg atgttgaaac accctaacat cttcatataa atttatttta
    12481 accattaaat taacaactta ttaaacgagg agtactatat ttgcaagaca attctactaa
    12541 atatctactt tatatccaaa ctgctacttc aaaccatctc gaaacaaatt gtgtcttttt
    12601 acattgcgat tacattctta aagttccaat taacaaactc gtttcatatt atgcgaaatt
    12661 gcatttatca tcacaaagtg tgctaattga gactgcaaaa aacatactaa atattaataa
    12721 actggttcct atttacatca acccaaaaac tatacttttt ccgttaaaac ataaacgtgc
    12781 accgatacaa atttatatca atgcacatta tattgttggt atgactgcca tagagaattc
    12841 aacattaata cattttcaag aaggcattca gctagaagtt gatgagccat tttctctagt
    12901 ttcaaaaaaa tgtcatgaaa gtttagcttt gaagcacttc attgaaaata ctatttcgaa
    12961 ttaaattta
//
LOCUS       DALPQQ010000069        12920 bp    DNA     linear   BCT 22-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus strain K18-6-464
            SAMD00233528-rid16434743.denovo.069, whole genome shotgun sequence.
ACCESSION   DALPQQ010000069 DALPQQ010000000
VERSION     DALPQQ010000069.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMD00233528
            Sequence Read Archive: DRR236061
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 12920)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 12920)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001543423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001543423.1
            Genome Coverage       :: 77x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/22/2022 17:09:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,811
            CDSs (total)                      :: 2,743
            Genes (coding)                    :: 2,689
            CDSs (with protein)               :: 2,689
            Genes (RNA)                       :: 68
            rRNAs                             :: 2, 4, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 4, 2 (16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 54
            CDSs (without protein)            :: 54
            Pseudo Genes (ambiguous residues) :: 0 of 54
            Pseudo Genes (frameshifted)       :: 27 of 54
            Pseudo Genes (incomplete)         :: 27 of 54
            Pseudo Genes (internal stop)      :: 10 of 54
            Pseudo Genes (multiple problems)  :: 10 of 54
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..12920
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMD00233528-rid16434743.denovo.069"
                     /strain="K18-6-464"
                     /db_xref="taxon:1280"
                     /geo_loc_name="Japan: Niigata"
     gene            complement(146..748)
                     /locus_tag="O7798_001640"
     CDS             complement(146..748)
                     /locus_tag="O7798_001640"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498653.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDC2863899.1"
                     /translation="MLISLVIPVFALLVIGGIIWMIIEGIVHISKKNKAIDNFFNQVN
                     KVSETYKFATTFLFLILATAGISQFYLYYIVSAFLFWLVILTFGIAGIIFLMPYGLCF
                     LPFYKQKKKKQTFKKYMVYTTIGLSICLGLSLVLVHTTKIYMDEGGVRYYYGSFVMKQ
                     AGGYAYLALAVLSTLLIVAKKATNKNKEIETVDNTNITER"
     gene            complement(1182..1925)
                     /locus_tag="O7798_001641"
     CDS             complement(1182..1925)
                     /locus_tag="O7798_001641"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498652.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HDC2863900.1"
                     /translation="MIKLNFNDLEIFITVCEEASINKAAIKLRYAQSNISQRISKLEN
                     ELGVVLLFRNQKGAKATKAGEEFLAYSKKVLRDTETIKNKMKNNTMSILCSELLFNYL
                     SESEEIMMSNNSINFISSGNIRKAIEKNNYDKVISFIKINDSNYRLSNVDTMKVTLYS
                     NGSNYDKEALLINKDEFCPLRKITLDNKLDSQRVMEIDSLAAIINLVKQGKGKALLPM
                     TFENKRDIVQDISKIFEVNYYTYNHIMHH"
     gene            2016..2549
                     /locus_tag="O7798_001642"
     CDS             2016..2549
                     /locus_tag="O7798_001642"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498651.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4865 family protein"
                     /protein_id="HDC2863901.1"
                     /translation="MHAMQYHVKLPSDYNMEIIRDRVRLNGYKTDGFKNLIIKAYLIS
                     QTTTNCITNTYSPLYLWRSSEGMTEFIFNGFYDNVISSFGWQNINIGVIYSMNITDSV
                     KHSLYALEEYIDIFPTLSLKEIEIKKLFRIFDNAVAEIIIYNPDKWKFVKYSFIENLP
                     KSLNPNIKIYDVLYISQ"
     gene            complement(2904..3764)
                     /locus_tag="O7798_001643"
     CDS             complement(2904..3764)
                     /locus_tag="O7798_001643"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498650.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HDC2863902.1"
                     /translation="MNLNILKSFLVTSETKNLTKASELLNYSQSTVSTHIEKLERQLD
                     VKLFYRKKYGMELTEEGLAYVKYAKVILDSNSEYEREIKGLYNKKVNISINMQESQYL
                     YRYYNKISEWLAEHPYVNLKFKSAHSNFYIKEEIANFKSDISLITDEKIINSNLTAIP
                     ITEERLIFVTNKEMKDFKLNDIQNHTLLVTEKGCSYREQLEMILYKYSFSTKQMIEFL
                     GIESLKKHLKNSGGIALLPEFIVADELENKSLFQIDVDVDIPNLETTLIINPESNKQV
                     LESFVKDVFL"
     gene            3877..4428
                     /locus_tag="O7798_001644"
     CDS             3877..4428
                     /locus_tag="O7798_001644"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498649.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flavodoxin family protein"
                     /protein_id="HDC2863903.1"
                     /translation="MITCLFGSSRKDGNSAIAVENLLKNLKVNFMNLYQSNIEKVTDN
                     RHSKGANFHNDDYEQILIKVLESDIIIFSTPLYWYSMSASLKLFIDRWTESLRDTQID
                     NFKEIMSQKKYLILIIGGDNPHTKAQPLVNQFKLIFEFMNITNYRFLIGEGNKPFDIL
                     NDSQFIEELANINLALKKGDIYD"
     gene            4421..5641
                     /locus_tag="O7798_001645"
     CDS             4421..5641
                     /locus_tag="O7798_001645"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498648.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HDC2863904.1"
                     /translation="MTDLLKIKNFRLFFLAEIISAFGVGISTVGANWYLIDKTNDSQL
                     LGIMLALNVLSGFLASPIIGGLADKYNRRNIILITYLLQVILYLLIVIALVMIGFETY
                     LVIGFAIVNGIGWTTYMATSRSLVKQILKPDQYTDANSLLEISLQTGMFIAGGLSGIL
                     YKINGFTLIIAMTIMMFLISIFMLFRLHVDKPTHSEEESTNSLLQEYLLGWKFLKDNM
                     MIFIFGVISIIPMVFTMIFNISLPGYVYNVLKLSSVQFGFSDMLYGIGGLCAGLISAI
                     LSKKISTKVLIFLLYFILVINSALFIWINSAFYLFIGSFILGYSISSIRIYMNTAIMN
                     TVSDKYVGRSFTIWTSISLLLQSLIAPFLGRWINEINDKFGFYIILILSLLIFVTLLL
                     VNKTDKIKYAHKEE"
     gene            complement(5713..6009)
                     /locus_tag="O7798_001646"
     CDS             complement(5713..6009)
                     /locus_tag="O7798_001646"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000179889.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TfoX/Sxy family protein"
                     /protein_id="HDC2863905.1"
                     /translation="MATKKDVHDLFLNHVNSNAVKTRKMMGEYIIYYDGVVIGGLYDN
                     RLLVKATKSAQQKLQDNTLVSPYPGSKEMILILDFTEATNLTDLFKTIKNDLKK"
     gene            complement(6058..6261)
                     /locus_tag="O7798_001647"
     CDS             complement(6058..6261)
                     /locus_tag="O7798_001647"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498646.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDC2863906.1"
                     /translation="MEGLKHSLKSLGWWDLFFAIPIFLLFAYLPNYNFITIFLNIVII
                     IFFSIGLILTTHIIIDKIKSNTK"
     gene            6570..7556
                     /locus_tag="O7798_001648"
     CDS             6570..7556
                     /locus_tag="O7798_001648"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000662030.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA-dihydrouridine synthase"
                     /protein_id="HDC2863907.1"
                     /translation="MKENFWSELPRPFFILAPMEDVTDIVFRHVVSEAARPDVFFTEF
                     TNTESFCHPEGIHSVRGRLTFSEDEQPMVAHIWGDKPEQFRETSIQLAKMGFKGIDLN
                     MGCPVANVAKKGKGSGLILRPDVAAEIIQATKAGGLPVSVKTRLGYYEIDEWKDWLKH
                     VFEQDIANLSIHLRTRKEMSKVDAHWELIEAIKNLRDEIAPNTLLTINGDIPDRKTGL
                     ELAEKYGIDGVMIGRGIFHNPFAFEKEPREHTSKELLDLLRLHLSLFNKYEKDEIRQF
                     KSLRRFFKIYVRGIRGASELRHQLMNTQSIAEARALLDEFEAQMDEDVKIEL"
     gene            7855..7956
                     /locus_tag="O7798_001649"
     CDS             7855..7956
                     /locus_tag="O7798_001649"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="universal stress protein"
                     /protein_id="HDC2863908.1"
                     /translation="MSTRGLNIWQEMEIGNVSHKVAKRAQIPLIIFK"
     gene            complement(8223..9416)
                     /gene="sqr"
                     /locus_tag="O7798_001650"
     CDS             complement(8223..9416)
                     /gene="sqr"
                     /locus_tag="O7798_001650"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498643.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II sulfide:quinone oxidoreductase Sqr"
                     /protein_id="HDC2863909.1"
                     /translation="MNKHYQIVIIGGGTAGVTVASRLLRKNQNLKEKIAIIDPADHHY
                     YQPLWTLVGAGVSSLKSSRKDMESVIPEGANWIKQAVSSFQPENNSVILGDNTVVYYD
                     FLVVAPGLQINWSSIKGLKENIGKNGVCSNYSPDYVNETWNQISNFKQGNAIFTHPNT
                     PIKCGGAPMKIMYLAEDYFRKHKIRSNANVIYATPKDALFDVGKYNKELERIVEERNI
                     TVNYNYNLVEIDGDKKVATFEHIKAYDRKTISYDMLHVTPPMGPLDVVKESTLSDSEG
                     WVDVNPTTLQHKSYSNVFALGDASNVPTSKTGAAIRKQAPIVANNLLQVMNNQMLTHH
                     YDGYTSCPIVTGYNRLILAEFDYNKNTKETMPFNQAKERRSMYIFKKDLLPKMYWYGM
                     LKGLI"
     gene            complement(9435..10769)
                     /gene="cstB"
                     /locus_tag="O7798_001651"
     CDS             complement(9435..10769)
                     /gene="cstB"
                     /locus_tag="O7798_001651"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498642.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="persulfide dioxygenase-sulfurtransferase CstB"
                     /protein_id="HDC2863910.1"
                     /translation="MFFKQFYDNHLSQASYLVGCQRTGEAIIIDPVRDLSKYIEVADS
                     EGLTITQATETHIHADFASGIRDVAKRLNANIYVSGEGEDALGYKNMPSKTQFVKHGD
                     IIQVGNVKLEVLHTPGHTPESISFLLTDLGGGSSVPMGLFSGDFIFVGDIGRPDLLEK
                     SVQIKGSTEISAKQMYESVQNIKNLPDYVQIWPGHGAGSPCGKALGAIPISTIGYEKI
                     NNWAFNEIDETKFIESLTSNQPAPPHHFAQMKQVNQFGMNLYQSYDVYPSLDNKRVAF
                     DLRSKEAFHGGHTKGTINIPYNKNFINQIGWYLDFEKDIDLIGDKSTVEKAKHTLQLI
                     GFDKVAGYRLPKSGISTQSVHSADMTGKEEHVLDVRNDEEWNNGHLDQAVNIPHGKLL
                     NENIPFNKEDKIYVHCQSGVRSSIAVGILESKGFENVVNIREGYQDFPESLK"
     gene            complement(10800..11867)
                     /gene="cstA"
                     /locus_tag="O7798_001652"
     CDS             complement(10800..11867)
                     /gene="cstA"
                     /locus_tag="O7798_001652"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001837745.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="persulfide response sulfurtransferase CstA"
                     /protein_id="HDC2863911.1"
                     /translation="MKQYGEKFIDEFSKAELEKLAKQGQLIDVRTEEEYALGHINGSI
                     LHPVDEIESFNKEKNKTYYVICRSGNRSANASKYLAKQGYNVINLDGGYKAYEEENDS
                     YDTQEEYKSIEIKADRKQFNYRGLQCPGPIVKISQEMKNIEVGDQIEVKVTDPGFPSD
                     IKSWVKQTRHTLVKLDENNNGINAIIQKEKAKDLDINYSAKGTTIVLFSGELDKAVAA
                     LIIANGARAAGKDVTIFFTFWGLNALKKVQTVNVKKQGIAKMFDLMLPKKNIRMPLSK
                     MNMFGLGNMMMRYVMKKKNVDSLPTLINQAIEQNIKLIACTMSMDVMGIQKEELRDEV
                     EYGGVGTYIGATENANHNLFI"
     gene            12004..12264
                     /gene="cstR"
                     /locus_tag="O7798_001653"
     CDS             12004..12264
                     /gene="cstR"
                     /locus_tag="O7798_001653"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498640.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="persulfide-sensing transcriptional repressor
                     CstR"
                     /protein_id="HDC2863912.1"
                     /translation="MNYDKKMINRINRIQGQLNGIIKMMEEGKDCKDVITQISASKSS
                     LQRLMGIIISENLIECVKAAADDEESSQELINEAVNLLVKSK"
     gene            12264..>12920
                     /locus_tag="O7798_001654"
     CDS             12264..>12920
                     /locus_tag="O7798_001654"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498639.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfite exporter TauE/SafE family protein"
                     /protein_id="HDC2863913.1"
                     /translation="MDIVNIVIMLLIGVFGGFISGLVGVGGAIIIYPAILLLPPLFGA
                     PAYSAYIASGLTSSQVFFSTLSGSLKARKKTEFSPQLVLYMGGGMIIGSMLGAFLANL
                     FDATFVNTVYIIIALLALTLMFIKVKPSSEKSSFNKYLLVIIGLFIGIISGIVGAGGA
                     FIIIPILLVLFKLPMNTVVANSIVIAFISSIGAFVIKLIQGYIPLYDALFLIIGSIIF
                     A"
BASE COUNT         4290 a         2108 c         1836 g         4686 t
ORIGIN      
        1 gtttgtaaaa tcctcactaa taaaattaat cgatatgacc ataattcatt atccaataaa
       61 tgactataaa aatttcttct atgccttcat ttgcaactaa atttggacat caaaaaagag
      121 cactcctgaa tgagcactcc cttaattatc tttccgttat atttgtattg tcgacggttt
      181 cgatttcttt atttttattt gtagcttttt tcgcaacaat taacaacgtt gaaagtaccg
      241 ctaaagctaa ataagcataa ccgcccgctt gtttcattac aaaactaccg taatagtatc
      301 ttacgccacc ttcgtccata taaattttcg tagtgtgaac caaaactaga gataagccta
      361 gacaaattga caaaccaatc gtagtgtaaa ccatgtattt tttaaatgtc tgttttttct
      421 ttttttgctt ataaaacggt agaaaacata atccatatgg cattaaaaaa atgatacctg
      481 caatgccaaa ggtaagtatg acaagccaaa aaagaaacgc tgatactata taatatagat
      541 aaaattgaga aataccagcc gtagccaaga ttagaaataa aaaagtagta gcgaatttat
      601 atgtctcact tactttatta acttggttaa aaaagttatc aattgcttta ttcttttttg
      661 aaatatgtac tataccttct ataatcatcc aaataatacc accaataact aacaaagcaa
      721 aaactgggat tacaagacta attaacatat cgttcacctg ctcacctcta ttttcaaaca
      781 attatgattg aattgaatca ttctaatttt tgtaaagtta cttgtttaat ttattatatt
      841 tattaactct atgataacaa aaatactgtt tgtgtataac aataaattga gatactcaat
      901 aatttgataa tgtgaaattg atacttttca aaatagttga atatgacaat taatgattag
      961 ttttgcaatg gtgctataat caatatttag cagttatcat tatgcttgaa agggtggtaa
     1021 aggcggagaa gtcatccact ttttcctata ctacaaggac ctttacttta aaacaacgaa
     1081 tttacaaaat aaaaggcata atttcttttc tgtcacatcg ctcattctaa ctactagact
     1141 tttaaaatcg ttcctgtaat ttaaactcaa tcaactttca attaatgatg cataatatga
     1201 ttataagtat agtagttaac ttcaaatatc ttagaaatgt cctgtactat atctctttta
     1261 ttctcaaaag tcataggtaa taaagccttt ccttttcctt gtttaactaa gtttattatt
     1321 gctgccaatg aatcaatttc cattacccgt tgtgaatcaa gcttattatc taaagttatt
     1381 ttccttaaag gacaaaactc atctttattt attagtaaag cctctttatc ataattactt
     1441 ccattactgt aaagcgttac tttcatagta tcaacattac taagtctata atttgagtcg
     1501 ttaattttta tgaatgaaat aaccttatca taattatttt tttctatagc ttttctaata
     1561 tttccactag aaataaaatt aattgagtta ttcgacatca taatttcttc gctctcagat
     1621 aaataattaa ataacagttc tgagcataaa atagacatag tattattttt cattttattt
     1681 tttatagtct ctgtatctct taatactttt ttgctatacg ctaagaattc ttcgcctgct
     1741 ttagttgcct tagcaccttt ttgatttcta aaaagcaaaa ctacacctaa ttcattttca
     1801 agcttgctaa ttctttgaga tatattagat tgtgcatatc taagtttaat tgcagcttta
     1861 ttgatagatg cttcttcaca tacagttata aaaatttcca aatcattaaa gttcaattta
     1921 atcacctatc actttttatg ataactatat cacaattgga taatatgaga ttttacttat
     1981 tattgctatc ctttttataa aagggggtat gctaaatgca tgcaatgcaa tatcatgtta
     2041 agttgcctag tgattacaat atggaaataa ttagagatag agttcgatta aatggttata
     2101 agactgatgg atttaaaaat ttaattataa aagcttattt aataagtcaa acaactacta
     2161 attgcattac aaatacttat tcaccattat atttatggag aagttcagag gggatgactg
     2221 aatttatatt caatggattt tatgataatg ttatttcttc ttttggatgg caaaatataa
     2281 atattggtgt gatatattca atgaacataa ccgattctgt taaacatagt ctttatgcgc
     2341 ttgaagaata tatcgacatt ttccctactt tatctctaaa agaaatagaa atcaaaaaat
     2401 tgtttagaat cttcgataat gcagttgcag aaattataat ttataatcct gataagtgga
     2461 agtttgtgaa atattcattt attgaaaatc ttccaaagag tctcaatcca aatataaaaa
     2521 tttatgatgt actatatatc tcacaatgaa agtacagatt taaagttatt attatcaaca
     2581 ttagaaaaca gactaaaata atttatctga acttattaat aataaagaac ctgctagatg
     2641 acagctattt aaaatacata agctactcat ttagcaggtt aaaatattaa tcaatccata
     2701 ctaactagta tgattcaaag gttttcatct attaaattct ttactatttt gaaaatgaat
     2761 gcccgcaatt tgaaatttca actagaaata atccttatta aagatataaa tcacctgttt
     2821 ttatattgaa ttactttttc attaacatct catttaaatt attatctttg agtttcacca
     2881 taactacacg ttttcaccaa taattataaa aaaacatctt ttacaaaaga ttcaagtact
     2941 tgcttattcg attcaggatt aattatcaat gttgtttcta aattcggaat atcgacatct
     3001 acgtctattt gaaacaaact tttattttct aattcatctg caacaataaa ttccggcaat
     3061 agcgcaatcc cacctgaatt tttcaagtgt ttttttaatg actcaattcc tagaaattca
     3121 atcatttgtt ttgttgaaaa gctatattta tataaaatca tttctaactg ttctctgtaa
     3181 ctacaccctt tttcagtaac aagtaatgta tggttttgaa tatcgtttaa tttgaaatct
     3241 ttcatctctt tgttagtaac aaatattaaa cgttcttcag ttataggaat agcagttaag
     3301 ttactattaa taatcttttc gtctgtgata aggctaatat ccgatttgaa attagcaatt
     3361 tcttctttaa tatagaaatt agaatgtgcg gatttaaact tcaagtttac atatgggtgt
     3421 tcagctaacc attcactaat cttattatag tagcgataca aatactgact ttcttgcatg
     3481 ttaatactta tatttacctt cttattgtaa agtcctttta tttctctctc gtattcgcta
     3541 ttactatcta aaatcacttt agcgtattta acgtatgcta agccttcttc cgttagttcc
     3601 ataccatatt tttttctata aaataattta acatctaatt gcctttctaa tttttcaata
     3661 tgtgtagata cagttgactg tgaatagtta agtaactctg atgctttagt aaggttcttt
     3721 gtttcactag ttactaaaaa tgattttaaa atgtttaagt tcaaagtagt acctccttta
     3781 gggttccctt ttatcgaatc ctgaattcta agaattctga tttaataata atatattaaa
     3841 tattattata aaggtaaatc gaaaggagtt atgactatga ttacttgttt atttggaagt
     3901 agtagaaaag atggcaattc agctatcgca gtagagaatc tattgaagaa tttaaaagtc
     3961 aactttatga atttatatca aagcaacatt gaaaaggtta cagataatcg tcatagcaaa
     4021 ggtgccaact ttcataatga tgattacgaa caaattttaa tcaaagtttt agaatcagat
     4081 attattattt tttcaacacc actctattgg tactccatga gtgcgtcttt aaaactcttc
     4141 attgatagat ggaccgagtc attgcgagat acgcaaatag acaacttcaa agaaatcatg
     4201 tcacaaaaaa agtatttgat tttaatcata ggtggcgaca atccgcatac caaagcacaa
     4261 cctttagtca accaattcaa attaatattt gagtttatga atattactaa ctatagattt
     4321 ttgatcggcg aaggcaataa accattcgat attttaaacg actctcaatt tatagaagag
     4381 ctcgcaaata taaatcttgc attgaaaaaa ggtgatattt atgactgatt tgttgaaaat
     4441 taaaaacttc agattgttct ttttagcaga aataatttca gcattcggag ttggaattag
     4501 tacagttggg gctaattggt atttaatcga caaaactaac gactcccaac tattaggtat
     4561 tatgttagct ttaaatgtat tatccggttt cttagcttct cctataatag gtggactagc
     4621 cgataaatat aatagacgaa atattatttt aatcacctat cttcttcagg taatattata
     4681 tttactcatt gtcatagcac tcgtaatgat aggatttgag acctatttag tgattggatt
     4741 tgcgattgtt aatgggatag gttggactac gtatatggca acatctagaa gtttagttaa
     4801 acagatatta aaaccagatc aatatacaga tgcaaattct ctattagaga ttagtttgca
     4861 aacaggtatg tttattgcag gtggattatc aggaatatta tataaaataa atggattcac
     4921 tctaattata gcgatgacta taatgatgtt tctaatcagc atttttatgt tatttagatt
     4981 gcatgtagat aaaccaactc attcagagga agaatcaaca aatagcttat tgcaagaata
     5041 tttattagga tggaaatttt taaaagacaa catgatgata tttatttttg gagttatttc
     5101 aatcatacca atggtgttta caatgatctt taacatatca ttaccaggat atgtttataa
     5161 tgttttaaaa ctttcgtctg tacaatttgg tttttcagat atgttatatg gcattggagg
     5221 attatgtgca ggtttaattt cagctattct ttcgaagaaa atctcaacta aagtattgat
     5281 atttttgtta tatttcatat tagtcataaa ttcagcacta tttatttgga taaactcagc
     5341 attttactta ttcataggat catttatact aggctactca atttcatcaa tcagaattta
     5401 tatgaataca gctataatga acactgtttc agataaatat gtcggtcgct catttacgat
     5461 atggacgtca atttcattgt tactgcaaag tttaattgct ccatttttag gaagatggat
     5521 taatgaaatt aatgataaat tcggtttcta tattatactc attttatcct tactcatatt
     5581 tgttacactg ctgcttgtta acaaaacaga caaaataaaa tatgcacata aagaagagtg
     5641 accgtcactc ttctttaaca agcgaccatt tatcgatggg cttagttctc tctgcaccca
     5701 cacttcacta cttcactttt tcaaatcatt ttttatggtc ttaaataaat cagtgagatt
     5761 tgttgcttcg gtaaagtcta gaattaatat catttcttta gaacctggat atggcgaaac
     5821 taatgtatta tcttgcaatt tctgctgggc acttttagtc gccttgacca ataatctatt
     5881 atcatacaaa ccacctataa ccacgccatc ataataaata atatattctc ccatcatctt
     5941 tcttgtctta accgcgtttg aattcacatg atttaaaaat aaatcatgta catctttctt
     6001 agtcgccatt gtaatcgctc cttcagtttt atgtttaatc acattcgtat taatgattca
     6061 tttcgtgttg ctcttaattt tatctataat tatatgcgta gttaaaatca aacctatgga
     6121 aaagaaaata atgataacaa tgttaagaaa tatagttata aaattatagt ttggaaggta
     6181 tgcgaatagc agaaaaatag gtatcgcaaa aaataaatcc caccaaccta aactttttaa
     6241 agaatgcttt aaaccttcca taatatcacc tttataaatt tgtctttgtt ataagataac
     6301 taaaaaatcg ctttactgta aaagtagcca aagaaaattc tgaatcatat tcataagtag
     6361 tgtatcatta ataatgaaca atttaatact ataatccttg atctttgtat tgatcaactt
     6421 accacaacat ttattttaga ctactcttag acttcccttt caaatggttg catctattga
     6481 aattcctttt gtataagtta ggcttttgtg gtaatatcat catgcataaa aaatcgagat
     6541 actaattata aagagggtat aaatatatta tgaaagaaaa tttttggagt gaattaccac
     6601 gtccattttt tattttggcg ccaatggaag acgttacaga tatcgtcttt cgacacgttg
     6661 taagtgaagc agctagaccg gatgtgtttt tcactgaatt tacaaatact gaaagctttt
     6721 gccaccctga aggcatacat agtgtgcgcg gacgcttaac ttttagtgaa gatgaacagc
     6781 cgatggtcgc tcatatatgg ggagataagc cagaacagtt ccgtgaaacg agtattcaat
     6841 tagctaaaat gggctttaaa ggcatagact taaatatggg atgtcctgta gcaaatgttg
     6901 ctaaaaaggg taagggttcc ggcttaatct taagacctga cgttgctgcc gaaattattc
     6961 aagcgactaa agcaggtggg cttccggtaa gtgttaaaac acgccttggc tactatgaaa
     7021 tcgatgaatg gaaagattgg ttgaagcacg tcttcgaaca agacattgcc aatttatcta
     7081 ttcatcttcg tacacgtaaa gaaatgagta aagtagatgc acattgggaa ttaatcgaag
     7141 ctattaaaaa tttacgtgac gaaattgcac caaatacatt gttaacaatt aacggtgata
     7201 ttcccgatag aaaaacagga cttgaactgg cagaaaaata tggcattgat ggcgtcatga
     7261 ttggtagagg cattttccac aatccattcg cttttgaaaa agaaccacgc gaacacacaa
     7321 gcaaggaact attagatcta ttgagattgc atttatcatt gtttaacaaa tatgaaaaag
     7381 atgaaatacg acaattcaag agcttgcgta gattctttaa aatctatgtg cgtggcataa
     7441 gaggcgctag cgaacttcga catcaattga tgaacacaca atcaattgca gaagcacgag
     7501 cactactcga tgaatttgaa gcccaaatgg acgaagacgt taaaattgaa ttatagtatg
     7561 agtaataaag tttatggatg atatttccca atttaacacg gattgaacac tttctactta
     7621 ggtattatct tggttttcct gataggataa ctcccgatga tgccttttta cttatgtcac
     7681 ttatcctttt ggaaatggtg caaaattaaa aatacatcag gatatcgttt aactcagaaa
     7741 aaaactccaa tcaaaaaaaa tgtttacaac acattatgaa attaaaattg ctcttagtgt
     7801 tcaacagaca aagttattga aattactatt ggaggtacat accaagctat cattttgagt
     7861 acacgtggtt tgaatatctg gcaagaaatg gaaattggta atgtcagtca taaagtcgct
     7921 aaacgtgctc aaataccatt aattattttt aaataattta gaggatgagg tataaacctt
     7981 taaaaaacag cagtgagatg attttcaatt agaaaatatc ttactgctgt ttctattttc
     8041 ataatcattc ttattgaatg acttcatcgt gatcatttaa aacagtaaca actttttcaa
     8101 tcttatacta tttagagcta aaaattcacg acatataaac acaacactga cacgtcattt
     8161 aaatacttaa tcttttatag taaaagattt ttcattaaaa atttattgtt ttctgtactt
     8221 tattatatta atccttttag catgccgtac caatacattt taggtaataa atctttctta
     8281 aatatataca tacttctacg ttctttggcc tgattaaacg gcattgtttc tttagtattt
     8341 ttattataat caaactctgc aagtattaac ctattatatc cagtaacaat agggcatgaa
     8401 gtataaccat cataatgatg cgttaacatt tgattattca tcacttgcaa taaattatta
     8461 gcgacgatag gtgcttgctt acgaatagct gcgcctgttt ttgaagtagg tacatttgaa
     8521 gcatcaccaa gtgcaaatac attagagtag cttttatgct gtaatgtggt tgggttaaca
     8581 tctacccaac cctcactatc tgaaagtgta ctttctttta ctacatctaa gggacccata
     8641 ggtggtgtta catgtaacat atcataactt attgtttttc tatcgtatgc tttgatatgt
     8701 tcgaatgtag ccactttttt gtcaccgtcg atttcaacaa ggttataatt ataattgact
     8761 gttatatttc tttcttcaac aatcctttct aattctttat tatattttcc tacgtcaaat
     8821 aaagcatctt ttggcgttgc atatatcaca ttagcgttag aacggatttt atgtttccta
     8881 aaataatctt cagctaaata cataattttc ataggcgcac ctccacactt tataggagtg
     8941 tttggatgcg taaaaatggc atttccttgt ttaaaattag aaatttggtt ccaagtttcg
     9001 ttaacatagt caggtgaata gttagagcaa acaccatttt tacctatatt ttcttttagt
     9061 cctttaattg aagaccaatt aatctgtaat cctggagcta ctactaaaaa atcataataa
     9121 acgactgtat tatctcctaa aataacgcta ttattttcag gttgaaaact tgaaacagcc
     9181 tgttttatcc agttagcacc ttcaggtata acactttcca tatctttacg agaacttttc
     9241 aaactagata cccctgcacc aaccaacgtc cataatggtt gatagtaatg atggtctgct
     9301 ggatctataa ttgctatttt ctcttttaag ttttgatttt ttcttaatag tcttgatgct
     9361 acggtaacac ctgctgtacc gccaccaata ataacaattt gataatgctt attcattttt
     9421 tccacatcct taaattattt taatgattct ggaaaatctt gatagccttc tctaatattc
     9481 accacatttt caaaaccttt gctttccaat atacccactg caattgaact tctaacacct
     9541 gactgacaat gtacatatat tttatcctct ttattaaaag gaatattttc atttaataat
     9601 ttaccatgcg gaatattaac tgcttgatct aagtgtccat tattccactc ttcatcatta
     9661 cgtacgtcta atacatgttc ttctttacct gtcatatcag cgctatgaac ggactgggtt
     9721 gaaatgcctg attttggcaa acgatagcct gctaccttat caaacccaat taattgtaaa
     9781 gtgtgtttcg ctttctcaac agtagattta tctccaatta aatctatatc tttttcaaaa
     9841 tctaagtacc aaccaatttg attaataaag tttttgttgt atggtatatt gattgttcct
     9901 tttgtgtggc caccgtgaaa ggcctctttg ctacgaagat caaatgctac tctcttatta
     9961 tctaaactag gataaacatc atatgattga tataaattca taccaaactg attaacttgt
    10021 ttcatttgtg caaaatgatg cggtggtgct ggttgatttg atgttaatga ttcaataaat
    10081 ttagtctcat caatttcatt aaatgcccag ttattaattt tctcataacc tattgtagat
    10141 ataggtatgg cacctaatgc tttaccacaa gggcttccag caccatgacc cggccagatt
    10201 tgaacatagt ctggtaaatt tttaatattt tgaacggact catacatttg tttcgcgcta
    10261 atttctgtag aaccctttat ttgaacagat ttttctaata aatcaggtct acctatatca
    10321 ccaacaaaaa taaagtcacc actaaataat cccatcggaa cacttgaacc accacctaaa
    10381 tcagtgagta aaaagctaat actttcaggc gtgtgtcctg gagtatgcag aacttctaat
    10441 ttaacattgc ctacttgaat gatatctcca tgtttaacaa attgtgtttt tgatggcata
    10501 tttttatacc ctaatgcatc ttcaccttcg ccagacacat atatatttgc atttaagcgt
    10561 ttagccacat cacgaattcc tgaagcaaaa tcagcatgaa tatgtgtttc tgtagcttgt
    10621 gtaattgtta aaccttcaga atctgcaact tctatatatt tcgataaatc acgaacaggg
    10681 tctattatta ttgcctctcc tgtacgttga caacccacta aatatgatgc ttgagataaa
    10741 tgattatcgt aaaactgttt aaaaaacatg ataacaactc cttttattaa tagatttaat
    10801 tagataaata aattatgatt cgcattttca gtagcaccaa tataagtgcc tacaccaccg
    10861 tactcaactt catctctaag ttcttctttc tgaataccca tgacatccat actcatcgta
    10921 caagcgatta atttgatatt ttgctcaata gcttgattga taagtgttgg taatgaatca
    10981 acatttttct ttttcattac gtagcgcatc atcatatttc ctaaaccaaa catattcatt
    11041 ttggaaagag gcattcgtat attctttttg ggcaacatta aatcaaacat ttttgcaata
    11101 ccttgctttt taacattaac tgtttgcact ttttttaatg cattaagccc ccaaaaagta
    11161 aagaagatag ttacatcttt tccagcagct ctagcaccat ttgcaataat caacgctgct
    11221 acagctttgt ctaattctcc actaaataat acaattgtag tacctttagc agaataattt
    11281 atatctaaat cttttgcttt ttctttttga ataatcgcat taattccatt gttattttca
    11341 tcaagcttaa ctaaagtatg ccttgtttgt ttcacccaac ttttaatgtc actagggaat
    11401 ccagggtctg tgactttgac ttcaatttgg tcacctactt caatattctt catttcttga
    11461 ctaattttta caattggccc tggacattga agaccacgat agttaaattg tttacgatct
    11521 gctttaattt ctatactttt atattcttct tgtgtatcat aactatcgtt ttcttcttca
    11581 taagctttat aaccaccatc aagatttata acgttataac cttgtttagc taaatattta
    11641 ctagcattag cacttctgtt accacttcta cagattacat aataggtttt atttttttct
    11701 ttattgaatg actcaatctc atcaacagga tgaagtatgg aaccattgat atgtcctaat
    11761 gcatactcct cttctgttct aacgtcaatt aattgccctt gcttggctag tttttccaat
    11821 tctgctttac taaattcatc gataaacttt tctccgtatt gtttcataat aacctcccta
    11881 aaaatacctg tatgggtatt ttaaacagtt ggatggaact tgtcaaatac ctctaggggt
    11941 atttgacaca tttgtgttta tctattaata tatttttatt caattaaaag tggaggtatg
    12001 actatgaatt atgataaaaa aatgattaat cgtattaata gaatacaagg gcaactaaat
    12061 ggaattatta aaatgatgga ggaaggaaaa gactgtaaag atgtcattac acaaataagt
    12121 gcatcaaaga gttcactcca acgcttgatg ggtatcatta ttagtgagaa tttaatagaa
    12181 tgtgtaaaag cagctgcgga tgatgaagaa agctcccaag agttaattaa tgaagctgta
    12241 aacttattgg tgaaaagtaa gtaatggata ttgttaatat agttatcatg ttactcattg
    12301 gggtattcgg tgggttcata tctggtctag taggcgtagg tggtgctatc attatttatc
    12361 cagctatttt attattacca ccattattcg gagcccctgc atatagcgca tatatcgcat
    12421 caggtcttac ttctagccaa gtctttttca gtacattaag tggctcatta aaagctcgaa
    12481 aaaaaacaga gttctcgcca caattagttc tttatatggg tggcggcatg attataggga
    12541 gtatgttagg tgcatttcta gcaaatttat ttgatgctac atttgtaaat acggtatata
    12601 tcattattgc tttacttgca ttaacattaa tgtttattaa agtgaaacct agttccgaaa
    12661 agtcttcatt taataaatat ttattagtta tcattggcct tttcattggt attatttcag
    12721 gtatagtagg tgcaggtggt gccttcatta ttattcctat attattggtt ttattcaaat
    12781 taccaatgaa tactgtagtc gctaatagta tagtaattgc ttttatatct tcaattggtg
    12841 cttttgtcat caaacttatt caaggttata tccctttata tgacgcctta ttccttataa
    12901 tagggagtat tatatttgct
//
LOCUS       DALPQQ010000070        12600 bp    DNA     linear   BCT 22-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus strain K18-6-464
            SAMD00233528-rid16434743.denovo.070, whole genome shotgun sequence.
ACCESSION   DALPQQ010000070 DALPQQ010000000
VERSION     DALPQQ010000070.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMD00233528
            Sequence Read Archive: DRR236061
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 12600)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 12600)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001543423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001543423.1
            Genome Coverage       :: 77x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/22/2022 17:09:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,811
            CDSs (total)                      :: 2,743
            Genes (coding)                    :: 2,689
            CDSs (with protein)               :: 2,689
            Genes (RNA)                       :: 68
            rRNAs                             :: 2, 4, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 4, 2 (16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 54
            CDSs (without protein)            :: 54
            Pseudo Genes (ambiguous residues) :: 0 of 54
            Pseudo Genes (frameshifted)       :: 27 of 54
            Pseudo Genes (incomplete)         :: 27 of 54
            Pseudo Genes (internal stop)      :: 10 of 54
            Pseudo Genes (multiple problems)  :: 10 of 54
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..12600
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMD00233528-rid16434743.denovo.070"
                     /strain="K18-6-464"
                     /db_xref="taxon:1280"
                     /geo_loc_name="Japan: Niigata"
     gene            complement(<1..637)
                     /locus_tag="O7798_001655"
     CDS             complement(<1..637)
                     /locus_tag="O7798_001655"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499127.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAD family hydrolase"
                     /protein_id="HDC2863914.1"
                     /translation="MKFDNYIFDFDGTLADTKKCGEVATQSAFKACGLTEPSSKEITH
                     YMGIPIEESFLKLADRPLDEAALAKLIDTFRHTYQSIEKDYIYEFAGITEAITSLYNQ
                     GKKLFVVSSKKSDVLERNLSAIGLNHLITEAVGSDQVSAYKPNPEGIHTIVQRYNLNS
                     QQTVYIGDSTFDVEMAQRAGMQSAAVTWGAHDARSLLHSNPDFIINDPSEIN"
     gene            complement(750..1298)
                     /gene="hxlB"
                     /locus_tag="O7798_001656"
     CDS             complement(750..1298)
                     /gene="hxlB"
                     /locus_tag="O7798_001656"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499126.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="6-phospho-3-hexuloisomerase"
                     /protein_id="HDC2863915.1"
                     /translation="MAKFSDYQLMLDELKMTLSHVEADEFSTFASKILHAEHIFVAGK
                     GRSGFVANSFAMRLNQLGKQAHVVGESTTPAIKSNDVFVIISGSGSTEHLRLLADKAK
                     SVGADIVLITTNKDSAIGNLAGTNIVLPAGTKYDEQGSAQPLGSLFEQASQLFLDSVV
                     MGLMTEMNVTEQTMQQNHANLE"
     gene            complement(1300..1932)
                     /gene="hxlA"
                     /locus_tag="O7798_001657"
     CDS             complement(1300..1932)
                     /gene="hxlA"
                     /locus_tag="O7798_001657"
                     /EC_number="4.1.2.43"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019834869.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-hexulose-6-phosphate synthase"
                     /protein_id="HDC2863916.1"
                     /translation="MELQLAIDLLNKEDAAELANKVKDYVDIVEIGTPIIYNEGLPAV
                     KHMADNISNVKVLADMKIMDAADYEVSQAIKFGADVITILGVAEDASIKAAIEEAHKN
                     NKQLLVDMIAVQDLEKRAKELDEMGADYIAVHTGYDLQAEGQSPLETLRTVKSVIKNS
                     KVAVAGGIKPDTIKDIVAESPDLVIVGGGIANADDPVEAAKQCRAAIEGK"
     gene            complement(2009..2767)
                     /gene="nagB"
                     /locus_tag="O7798_001658"
     CDS             complement(2009..2767)
                     /gene="nagB"
                     /locus_tag="O7798_001658"
                     /EC_number="3.5.99.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499124.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucosamine-6-phosphate deaminase"
                     /protein_id="HDC2863917.1"
                     /translation="MKVLNLGSKKQASFYVACELYKEMAFNQHCKLGLATGGTMTDLY
                     EQLVKLLNKNQLNVDNVSTFNLDEYVGLTASHPQSYHYYMDDMLFKQYPYFNRKNIHI
                     PNGDADDMNAEASKYNDVLEQQGQRDIQILGIGENGHIGFNEPGTPFDSVTHIVDLTE
                     STIKANSRYFKNEDDVPKQAISMGLANILQAKRIILLAFGEKKRAAITHLLNQEISVD
                     VPATLLHKHPNVEIYLDDEACPKNVAKIHVDEMD"
     gene            3043..3405
                     /locus_tag="O7798_001659"
     CDS             3043..3405
                     /locus_tag="O7798_001659"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499123.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YojF family protein"
                     /protein_id="HDC2863918.1"
                     /translation="MLEPIKEQEVIDLLASFEHKPVYLHVETTNGAYANHFDQRVFNA
                     GTFLRNIQITYTHAQLKGGNKEPYRIGLKLSNGGWVYVQGLTHFEVNEHDEFLIAGFN
                     YEGQLAAALQISERPFNL"
     gene            3419..4084
                     /gene="bshB2"
                     /locus_tag="O7798_001660"
     CDS             3419..4084
                     /gene="bshB2"
                     /locus_tag="O7798_001660"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499122.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bacillithiol biosynthesis deacetylase BshB2"
                     /protein_id="HDC2863919.1"
                     /translation="MTDERHVLVIFPHPDDETFSSAGTLANYIQKGIPVTYACLTLGQ
                     MGRNLGNPPFATRESLPSIRERELEEACKVIGITDLRKMGLRDKTVEFEPYEHIDGMI
                     KSLIDDTNPSLIISFYPGYAVHPDHEATADAVIRTVERMPKEERPRLTLVAFSNDATE
                     ALGEPDIQNDITDFKELKIKAFEAHASQTGPFLKQLASPEIDGKQHSFLTVEPYWTYH
                     FKS"
     gene            4097..4975
                     /locus_tag="O7798_001661"
     CDS             4097..4975
                     /locus_tag="O7798_001661"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002445753.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GTP cyclohydrolase I FolE2"
                     /protein_id="HDC2863920.1"
                     /translation="MTEFDLSTREGRWKHFGSVDPIEGTKPTTKNEMTDLQSTHKDFL
                     FEIEEVGIKNLVYPVLVDQYQTAGTFSFSTSLTKDEKGINMSRIIESVEKHYDNGIEL
                     EFNTLYQVLRTLQTNMKQNAAGVDVSGKWFFDRYSPTTNIKAVGNADVTYGLAIDGDK
                     VTRKELTIEATVTTLCPCSKEISEYSAHNQRGVVTVKTYINKDQDIVDDYKNKILDAM
                     EANASSILYPILKRPDEKRVTERAYENPRFVEDLIRLIAADLVEFDWLDGFDIECRNE
                     ESIHQHDAFAKLKYRK"
     gene            5257..6747
                     /locus_tag="O7798_001662"
     CDS             5257..6747
                     /locus_tag="O7798_001662"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499120.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HDC2863921.1"
                     /translation="MNYFVGNSLGVNLTGIEKAIINRLNLFKEMGRPAQCVFLSWNRY
                     LYRNAQNYITSSDYINMYDFFQEATYLERNEPFDWLSYWTDECHYTLKHVENSHDFRI
                     YDQERFLMYAHFQDPKYRILDYVNHFDSQRRKVKRDFYDVRGFLSCSRILVDKQQTLC
                     EFFYNPEGDTKLEKYFSYKDGKPEVQKIIVYYANKQYFFNNETELGAFFIKQLYQHGD
                     LFFSDRNVYTAPIFNLTPESIPVVAVLHSTHIKNIDALDSSPFKNVYKAMFENLSRYR
                     AIIVSTEQQKLDVEKRINHTIPVVNIPVGYSETIDTPVQTLDQRSVKLISVARYSPEK
                     QLHQQIELIKRLVSYVPKIELHMYGFGSESKKLNELIQKYGLENHVYLRGFLSNLDQE
                     YSDAYLSLITSNMEGFSLALLESLAHGVPVISYDIKYGPNELITSDFNGYLITKNDED
                     ALFDKVKYVIDHPEVQQRLSKGSLAKAQQYSKASLIKQWDQFVRLI"
     gene            complement(6871..8343)
                     /locus_tag="O7798_001663"
     CDS             complement(6871..8343)
                     /locus_tag="O7798_001663"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499119.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HDC2863922.1"
                     /translation="MNYILGTILESKITGVEKAQINRLKLFKQHGISSKCVYVKWNPY
                     SYTYAKQHQIENDVFTMYDYFQKAINYKKTKQVNWIQYWEKSCRYTLKFVENSNDVRI
                     YDEEQFVMYAHFLDKQYHQLNYVNYFDHKRRKVKRELYDGRGFLSCSRILGEGQRIVL
                     ENYYTPNGEIVIQKYFDDIKGKNTLTKVILNEDQHQQFFDTEDELVQYFLHQLCKNND
                     QIILDRPHELGNVIAGLNQSIPVIVVLHSTHLSGAGNGIKSFYKTVFNNLTRYKAIVV
                     STEKQCQDISQYIENKIPVINIPVGYVANLKYQFDINQKEKNHIISIARLVENKQIKH
                     QIEVIKQLVTKHPNIQLNIYGHGNGLSEYRQLVEDYHLSEHVKFHGFKTHINEEIAKA
                     ELMLSTSKMEGFGLAILESLSVGTPVISYDVDYGPSELIQDGFNGYLVPQGDINQMVE
                     KVDQLLNNTQKLQQFSINSIESAQQYNATTISTKWQNILN"
     gene            complement(8462..12517)
                     /gene="sdrD"
                     /locus_tag="O7798_001664"
     CDS             complement(8462..12517)
                     /gene="sdrD"
                     /locus_tag="O7798_001664"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499118.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MSCRAMM family adhesin SdrD"
                     /protein_id="HDC2863923.1"
                     /translation="MINRENKTAITRKGMVSNRLNKFSIRKYTVGTASILVGTTLIFG
                     LGNQEAKAAESTNKELNEATTSASDNQSSDKVDMQQLNQEDNTKNDNQKEMVSSQGNE
                     TTSNGNKLIEKESVQSTTGNKVEVSTAKSDEQASPKSTNEDLNTKQTISNQEALQPDL
                     QENKSVVNVQPTNEENKKVDAKTESTTLNVKSDAIKSNDETLVDNNSNSNNENNADII
                     LPKSTAPKRLNTRMRIAAVQPSSTEAKNVNDLITSNTTLTVVDADKNNKIVPAQDYLS
                     LKSQITVDDKVKSGDYFTIKYSDTVQVYGLNPEDIKNIGDIKDPNNGETIATAKHDTA
                     NNLITYTFTDYVDRFNSVQMGINYSIYMDADTIPVSKNDVEFNVTIGNTTTKTTANIQ
                     YPDYVVNEKNSIGSAFTETVSHVGNKENPGYYKQTIYVNPSENSLTNAKLKVQAYHSS
                     YPNNIGQINKDVTDIKIYQVPKGYTLNKGYDVNTKELTDVTNQYLQKITYGDNNSAVI
                     DFGNADSAYVVMVNTKFQYTNSESPTLVQMATLSSTGNKSVSTGNALGFTNNQSGGAG
                     QEVYKIGNYVWEDTNKNGVQELGEKGVGNVTVTVFDNNTNTKVGEAVTKEDGSYLIPN
                     LPNGDYRVEFSNLPKGYEVTPSKQGNNEELDSNGLSSVITVNGKDNLSADLGIYKPKY
                     NLGDYVWEDTNKNGIQDQDEKGISGVTVTLKDENGNVLKTVTTDADGKYKFTDLDNGN
                     YKVEFTTPEGYTPTTVTSGSDIEKDSNGLTTTGVINGADNMTLDSGFYKTPKYNLGNY
                     VWEDTNKDGKQDSTEKGISGVTVTLKNENGEVLQTTKTDKDGKYQFTGLENGTYKVEF
                     ETPSGYTPTQVGSGTDEGIDSNGTSTTGVIKDKDNDTIDSGFYKPTYNLGDYVWEDTN
                     KNGVQDKDEKGISGVTVTLKDENDKVLKTVTTDENGKYQFTDLNNGTYKVEFETPSGY
                     TPTSVTSGNDTEKDSNGLTTTGVIKDADNMTLDSGFYKTPKYSLGDYVWYDSNKDGKQ
                     DSTEKGIKDVKVTLLNEKGEVIGTTKTDENGKYCFDNLDSGKYKVIFEKPAGLTQTGT
                     NTTEDDKDADGGEVDVTITDHDDFTLDNGYFEEDTSDSDSDSDSDSDSDSDSDSDSDS
                     DSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDS
                     DSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDS
                     DSDSDSDSDSDSDSDSDSDSDSDSDSDSDAGKHTPVKPMSTTKDHHNKAKALPETGSE
                     NNGSNNATLFGGLFAALGSLLLFGRRKKQNK"
BASE COUNT         3827 a         2180 c         1945 g         4648 t
ORIGIN      
        1 tattaatttc tgatggatca ttaataataa aatccggatt tgaatgaagt aatgaccttg
       61 catcatgtgc accccaagtg acagctgcag attgcatacc agcacgttgt gccatctcaa
      121 catcaaacgt tgaatcacca atatacaccg tttgttggct atttaaattg tagcgttgca
      181 caattgtgtg tatgccttca ggatttggtt tatatgcact tacttgatcg gatccaacag
      241 cttcggtaat caagtgattt aatccaatag ccgataaatt tctttctaat acatcactct
      301 tcttactaga caccacgaaa agttttttcc cttggttata caaacttgta atggcttcag
      361 ttatacccgc aaattcataa atatagtcct tttcaataga ttgatatgta tgtctaaatg
      421 tatcgattaa ctttgctaat gctgcttcat ctaatggtcg gtctgctaat tttaaaaatg
      481 attcttcaat aggtattccc atataatgcg ttatttcttt agatgatggt tccgttaagc
      541 cacatgcttt aaatgcactt tgtgttgcta cttcaccaca ttttttcgtg tctgccaacg
      601 taccatcaaa atcaaaaata taattgtcaa acttcaatat taacacccct attcgtttat
      661 tattgatatt atactataat ttattattta aataaaaaaa taatcgataa tatttctgcc
      721 taggcatcat attatcgact atctttattt tattctaaat tagcatgatt ttgttgcatc
      781 gtttgttccg taacattcat ttcagtcatc aatcccatta caacactatc taaaaataat
      841 tgagatgctt gttcaaacaa acttcctaat ggttgtgccg agccttgttc atcatatttt
      901 gtacctgcag gcaaaacgat gttcgtccca gctagattgc ctattgcaga atctttattt
      961 gtagtaatta atacgatgtc agcacctact gattttgctt tgtctgctaa taatcttaaa
     1021 tgttccgtgg aacctgaacc agagataatt acaaatacat cattcgactt aatcgcaggt
     1081 gtcgttgatt ctccaacaac atgtgcctgt ttgccgagct gatttaagcg cattgcaaaa
     1141 ctattcgcca cgaatcctga acgtcctttg ccagctacaa atatatgttc agcatgtagt
     1201 attttggatg caaaagttga aaactcatcc gcttcaacat gtgacaaagt catctttaat
     1261 tcatctagca ttaattgata gtcactaaat ttagccatat tacttacctt cgattgcagc
     1321 gcgacattgt tttgcagctt ctactggatc atctgcattt gcgattccgc caccaacaat
     1381 aacaagatca ggactttcag cgacaatatc tttaattgta tctggtttaa ttccacctgc
     1441 tactgcaact ttagaatttt taataacaga tttaacggtt cttaaagttt ctaatggtga
     1501 ttgcccttct gcttgtaaat cataaccagt gtgtactgca atataatcag cacccatttc
     1561 atctagttct tttgcacgtt tttctaaatc ttgaacagca atcatatcaa ctagtaattg
     1621 tttattattt ttatgagctt cttcaatagc tgctttaatt gatgcatctt ctgcaacacc
     1681 tagtattgta attacatccg cgccaaattt aattgcttgg ctaacttcat aatcagctgc
     1741 atccataatt ttcatgtctg ctaatacttt tacattacta atgttgtctg ccatatgttt
     1801 aactgctggt aaaccttcgt tgtaaatgat tggcgtaccg atttctacga tatctacata
     1861 atcttttact ttatttgcta actcagccgc gtcttctttg tttaataaat caattgctaa
     1921 ttgtaattcc actaaaaatc atccttccaa tgctttttat ctttctattg gaacctttcc
     1981 cgaggcattt cttaattaaa cattgcaatc aatccatttc atcgacatga attttcgcaa
     2041 catttttcgg gcaagcttcg tcgtctaaat atatctcaac attcgggtgt ttgtgaagta
     2101 atgtggctgg aacatcaaca gaaatttcct gatttaataa atgtgtaata gcagcacgtt
     2161 tcttttcacc aaatgcgagt aaaatgatac gtttggcttg aagaatatta gcaagtccca
     2221 tcgaaatggc ttgctttgga acatcatctt cgtttttaaa atatcgacta ttagccttaa
     2281 tagtactttc agtcaaatca acgatatgag taacgctatc aaacggcgta ccaggttcat
     2341 taaatccaat atgaccattt tcaccaatac ctaaaatttg aatatcacgt tgaccttgtt
     2401 gttctaaaac gtcattatat tttgacgctt ccgcattcat atcatcggca tctccatttg
     2461 gaatatgaat gttctttcta ttaaaataag gatattgttt gaaaagcatg tcatccatat
     2521 aatagtgata actttgcgga tgtgatgcgg ttaaacctac atattcgtct aaattaaacg
     2581 tggatacatt gtctacgttt aactgatttt tatttaataa cttaacaagt tgttcataca
     2641 aatctgtcat tgtaccacca gttgctaaac ctagtttaca gtgctgatta aatgccatct
     2701 ctttatataa ctcacatgca acatagaatg atgcttgttt tttcgatcct aagtttaata
     2761 ctttcattgt ttacatgcct ccacaaattt aatacatttt aaaaacttat gaattcattc
     2821 atacaccatt aatatagcat catttttaat gtttaacact tttcaaattc caacaaattt
     2881 ttgattttta aaagtaaaaa actaatgctg tatgattacg taatcctgag taattaccct
     2941 tcatgaaaat taatttataa ataattgagc aatcgtatac aattatcgaa tagtttttag
     3001 taaaatagaa agataaacac attgatagtg taaggagtga acgtgttgga accaattaaa
     3061 gaacaagaag ttatagattt acttgcttct tttgaacata aacctgtgta tctgcatgtt
     3121 gaaacgacaa atggggccta tgcgaaccat ttcgatcaac gtgtttttaa tgctggtact
     3181 tttttaagaa acatacaaat aacatatacg catgcacaac taaaaggtgg taataaagaa
     3241 ccttatcgca ttggtcttaa actatcaaat ggtggttggg tttatgtaca aggtctaacg
     3301 cattttgagg tcaatgagca tgatgaattt ttaattgcag gttttaatta cgaaggtcaa
     3361 ctcgctgcag cacttcaaat tagtgagcga ccatttaatt tatagaggag gcatcaacat
     3421 gactgacgaa agacatgtat tagtaatatt tccacatcct gatgatgaaa ccttctcatc
     3481 tgcaggcaca ttagcaaatt atatccaaaa aggcatacct gtaacatatg catgtttaac
     3541 cctaggacaa atgggcagaa atttaggtaa tcccccattt gcaacacgcg aatcattacc
     3601 aagtattcgt gagcgtgaac tagaagaagc ttgtaaagtt atcggtatta ctgatttaag
     3661 aaaaatgggt ttacgtgaca aaactgtcga atttgaaccc tatgaacata tagatggtat
     3721 gattaaatct ttaatcgatg atacaaatcc atcattgatt atttcatttt atcctggata
     3781 tgcagtacat cctgatcacg aagcaacagc agacgctgta attcgaacgg ttgaacgcat
     3841 gcctaaagaa gaacgccctc gtttaacttt agttgcgttc agtaatgatg caaccgaagc
     3901 tcttggagaa cctgatattc aaaatgatat tacagatttt aaagaactta aaattaaggc
     3961 atttgaagca catgcttctc aaacaggtcc atttttaaaa caattagcaa gtcctgaaat
     4021 cgatggtaaa caacacagct ttttaacagt cgaaccatat tggacatatc actttaaatc
     4081 ttaacggagg aaaaaaatga ctgaatttga tttatcgaca cgagaaggtc gttggaaaca
     4141 ctttggttcc gtagatccta ttgaaggcac gaaacctact actaagaacg aaatgacaga
     4201 tttacaaagt acacataaag attttttatt tgaaatagaa gaagttggta ttaaaaactt
     4261 agtgtaccct gtacttgttg accagtatca aacagctggc acatttagtt tttcaacaag
     4321 tttaacaaaa gacgaaaaag gtattaatat gagccgtata atcgaaagtg ttgaaaagca
     4381 ctatgataat ggtattgaac ttgaatttaa tacactttat caggtgttac gcactttaca
     4441 aacgaatatg aaacaaaatg cggcaggcgt tgatgtttct gggaaatggt tctttgatcg
     4501 ctatagtcca accacaaata ttaaagcagt tggtaatgcc gatgtcactt atggattagc
     4561 aattgacggt gataaagtta cacgtaaaga acttactatt gaagcaactg tcacaacgct
     4621 atgcccttgt tcaaaagaaa taagtgagta ttcagcgcac aaccaacgtg gtgttgtcac
     4681 tgttaaaaca tatattaata aagatcaaga catagttgat gactataaaa ataaaatttt
     4741 agatgcaatg gaagctaatg caagttcaat tctataccct attttaaaac gtcctgatga
     4801 aaaacgtgtg acagagcgtg catatgaaaa tccacgtttt gtcgaagact taattcgttt
     4861 aattgccgcg gacttagttg aatttgattg gttagacggt ttcgatatcg aatgtcgtaa
     4921 tgaagagtct atccatcaac atgatgcttt cgctaaatta aagtatcgca aataatatca
     4981 tatgattaat tcaaacgcgt aacattagtt gcgcgttttt attatacctt ctagagttgt
     5041 atatctcttt tataaatctt ctcatttgat gtgcctgagt cataaatcaa tatcctaagc
     5101 tctacaatga tatattggtc gtagttgatt gaataactac tatcattata aatatcaaaa
     5161 tttgttgttt tataaataaa cacatcttcc agttaaaaga agtaattaaa tattatgtga
     5221 tataattata aaaaatagat ataagtggtg ttgtaaatga attattttgt aggtaatagt
     5281 ttaggtgtta atttaactgg gatagagaaa gcaattatta atcgtttaaa tttatttaaa
     5341 gaaatgggaa gaccagcgca atgtgtattt ctgtcatgga atagatattt atatagaaat
     5401 gcccaaaatt atattactag ttctgactat attaatatgt atgatttctt ccaagaagca
     5461 acatatttag aacgcaatga accatttgac tggttgtcgt attggactga tgaatgtcat
     5521 tatactttaa aacatgttga aaatagtcat gactttagaa tatatgatca agagcgtttc
     5581 ttaatgtatg cccattttca agatcctaaa tatcgtatat tagattatgt aaatcatttt
     5641 gatagtcaaa gacgaaaagt aaaacgtgat ttttatgatg tgcgtggctt tttaagttgt
     5701 agtaggattc ttgttgataa acaacaaaca ttatgtgaat ttttctataa tccagaaggt
     5761 gacacaaaat tagaaaagta tttttcttac aaggatggca aaccagaagt acaaaaaatt
     5821 attgtttact atgctaacaa acaatatttc tttaataatg aaacggaatt aggcgcattt
     5881 ttcattaaac aactatatca acatggggat ttatttttca gtgatcgtaa tgtgtacaca
     5941 gcacctattt tcaacttaac gcctgagtca atcccagtag tagctgtgct tcacagtaca
     6001 cacattaaaa atattgatgc attagattca tcgccattta aaaatgtata taaagcgatg
     6061 tttgaaaatt tatctcgata tcgtgcaatt atcgtttcta ctgagcagca aaaattagat
     6121 gttgaaaaac gtattaacca tactattcca gttgttaata ttcctgtcgg ctatagtgaa
     6181 acaattgata caccagtcca aacattagat cagcgcagtg ttaaattaat ttccgttgct
     6241 cgttattcac ctgaaaaaca attacatcaa caaattgaat taattaaacg cttagtatcg
     6301 tatgtcccaa aaatagagct tcatatgtat ggttttggtt ctgaaagtaa aaaattaaat
     6361 gaattgatac aaaaatatgg attggaaaat catgtttact tacgcggctt tttaagcaat
     6421 ctagaccaag aatatagcga tgcctatttg agtttaataa caagtaacat ggaaggtttc
     6481 tctttagcgc tacttgaatc tttagcacat ggtgttccag ttattagtta tgatattaaa
     6541 tatggaccta acgaactgat tacttcagat ttcaatggtt atttaattac taaaaatgat
     6601 gaagatgccc tatttgataa agtaaaatat gtgattgatc atcctgaagt acagcaacga
     6661 ctgtcaaaag gtagtttggc aaaagcacaa caatatagta aagcgtcgtt aattaaacaa
     6721 tgggaccaat ttgttcgtct tatataaatg tactttacct ttatttttac aaaaatagca
     6781 ttttcctatg tcatttaact aaacatgtaa gttcgtatga acgaggtttg ttaaatagat
     6841 gattctagga aaatgctttt ttcttttgac ttagtttaaa atattttgcc actttgtact
     6901 gatagtagtt gcattgtact gttgtgcaga ttctatgcta ttaattgaaa actgttgcaa
     6961 tttttgagta ttatttagta attggtcgac cttttcaacc atttgattga tgtcaccttg
     7021 aggtactaaa tagccattaa atccatcttg aatcagttct gatggaccat aatctacatc
     7081 ataactgatc actggtgtac ctactgaaag cgactctaaa attgctaagc caaaaccttc
     7141 cattttactt gtcgataaca tcagttctgc tttagcaatc tcttcattaa tatgcgtctt
     7201 aaaaccatga aatttaacat gttccgataa atgataatct tctacaagtt gtcgatattc
     7261 tgacaaacca tttccatgtc cataaatatt caattgaata ttgggatgtt ttgttactaa
     7321 ttgcttgatt acttcaattt gatgtttaat ttgtttattt tcaacgaggc gagcaattga
     7381 tatgatatga tttttctcct tttgattgat gtcaaattga tactttaaat ttgccacgta
     7441 gccaaccgga atattgataa ctggtatttt attttcaata tattgtgaaa tatcttggca
     7501 ttgcttttct gttgatacaa caatcgcttt ataacgtgtt aaattattaa acactgtttt
     7561 ataaaaactt tttataccat taccggcacc ggataaatgt gtactatgga gcacaacaat
     7621 aactggaata ctttgattta atcccgctat aacatttcct aattcatgag gacgatctaa
     7681 tatgatttga tcattatttt tacataattg atggagaaaa tattgaacta attcatcttc
     7741 tgtatcaaaa aattgttgat gctggtcttc atttaagata acctttgtga gcgtgttttt
     7801 cccttttata tcgtcaaaat atttttggat gacgatttcc ccattaggtg tatagtaatt
     7861 ttcgagtaca atccgttgtc cttcacctaa aattcgagaa caacttaaaa agcctcttcc
     7921 atcatacaat tcgcgtttta cttttcttct tttatgatca aaataattca cataatttaa
     7981 ttgatgatac tgtttatcta aaaaatgagc atacattaca aattgctctt catcatatat
     8041 tctgacatca tttgaatttt ccacaaattt caatgtgtac ctacatgact tttcccaata
     8101 ctgtatccag ttaacttgct ttgtcttttt ataattgatt gctttttgaa aatagtcata
     8161 cattgtaaat acatcatttt caatctgatg ttgcttcgca tatgtgtatg aataaggatt
     8221 ccatttaaca tatacacatt ttgaagatat gccgtgttgt ttgaacaact tcaatctatt
     8281 tatttgcgct ttttctacac ctgtaatttt actttctaaa attgttccta aaatgtaatt
     8341 catattatcg cctcatataa gttttattcc gtatctttat tgtttatttt atatgaaaaa
     8401 tacatctatt gcatgtgtaa ttataaaaaa accaggccac aaggacctgg gtcatattgt
     8461 attatttgtt ttgttttttg cgacgaccga ataacaataa tgaacctaat gctgcaaata
     8521 atccaccaaa taacgttgcg ttatttgagc cgttattttc actacctgtt tctggtaatg
     8581 cttttgcttt attgtgatgg tctttagtag tactcattgg tttaacaggt gtatgttttc
     8641 ctgcatccga gtccgaatcg ctatctgagt ctgaatcact gtctgagtct gagtcgctat
     8701 cagagtctga gtcgctgtcc gaatctgagt cgctatctga gtctgagtcg ctgtctgaat
     8761 ctgaatcact gtctgagtct gagtcgctat ctgagtctga atcgctgtct gaatctgagt
     8821 cgctatctga gtctgaatcg ctgtctgaat ctgagtcgct atctgagtcc gaatcgctat
     8881 ctgaatctga gtcgctgtct gagtctgagt cgctatctga gtctgaatcg ctgtctgagt
     8941 ccgaatcgct atctgaatct gagtcgctgt ctgagtctga atcgctatct gaatctgagt
     9001 cgctatctga gtctgaatcg ctgtccgaat ctgagtcgct atctgaatct gagtcgctgt
     9061 ctgaatctga atcactgtct gagtctgagt cgctgtctga gtctgagtcg ctgtctgagt
     9121 cactatctga gtctgaatcg ctgtctgatg tatcttcttc gaagtatccg ttatcaagtg
     9181 tgaaatcatc atgatccgta attgttacgt caacttcgcc accatctgca tctttatcat
     9241 cttcagttgt atttgtacct gtttgtgtta agccagcagg cttttcaaaa ataactttgt
     9301 atttaccgct atctaaatta tcaaagcagt atttaccatt ttcatctgtt ttagttgttc
     9361 caattacttc gcctttttca tttaataaag taactttaac atctttgata cctttttcag
     9421 ttgaatcttg tttgccgtct ttattactgt cgtaccaaac ataatcacct aaactatatt
     9481 ttggtgtttt atagaaacca ctgtctaatg tcatgttatc tgcatcttta atgacacctg
     9541 ttgttgttaa accattagaa tctttttcag tatcatttcc agaagttact gaagttggtg
     9601 tataacctga tggtgtctcg aattcaactt tataagttcc attgtttaaa tcagtgaatt
     9661 gatatttacc attttcatct gttgtaactg tttttaaaac tttgtcgttt tcatctttta
     9721 acgtaactgt tacacctgaa atgccctttt catctttatc ttgaacaccg tttttatttg
     9781 tatcttccca tacatagtca cctaagttgt aagtcggttt gtagaaacca gagtcaatag
     9841 tatcgttatc tttatcttta atgacacctg ttgttgatgt accatttgaa tctatacctt
     9901 catcagttcc tgaacctact tgtgttggtg tgtaacctga tggtgtttcg aattcaactt
     9961 tataagttcc attttctaat ccagtaaatt gatatttacc atctttatct gttttagttg
    10021 tttgtaaaac ttcaccgttt tcatttttca atgtaactgt tacgcctgaa ataccttttt
    10081 cagttgaatc ctgcttacca tctttatttg tatcttccca tacataatta cctaaattat
    10141 attttggtgt tttgtagaat ccactatcta atgtcatgtt atcagcacca ttaataacac
    10201 ctgttgttgt taaaccatta gagtcttttt caatgtcgct accagatgtt actgtagtcg
    10261 gtgtatagcc ttctggtgta gtaaattcaa ctttataatt accattatct aaatcagtaa
    10321 atttatattt gccatcagcg tctgttgtaa ctgtttttaa cacgttaccg ttttcatctt
    10381 ttaatgttac cgttacgcca gatatacctt tttcatcttg gtcttggata ccatttttat
    10441 ttgtatcttc ccagacatag tcacctaagt tgtatttagg tttgtaaata cctaagtctg
    10501 cagataagtt atctttgcca ttaactgtaa taactgaaga taagccgttt gaatctaatt
    10561 cttcgttatt accttgtttt gaaggggtta cttcataacc ttttggtaag tttgaaaatt
    10621 ctacacggta atctccatta ggtaagtttg gaatcaagta tgacccatct tctttagtaa
    10681 ctgcttctcc tacttttgta tttgtattat tatcaaatac agttacagtt acattgccaa
    10741 cgcctttttc tcctaattct tgaacaccgt ttttattagt atcttcccat acgtagttac
    10801 caattttata tacttcttga ccagctccgc cactttggtt attagtaaat cctaaagcat
    10861 tgccagtaga aacggattta ttacctgttg aagataaagt agccatttga acaagtgttg
    10921 ggctttcgct atttgtatat tggaattttg tattaaccat tacaacataa gcagaatctg
    10981 catttccaaa atcaataaca gcgctattgt tgtcgccata tgtaattttc tgcaagtatt
    11041 gatttgttac atctgtaagc tctttagtat tcacatcgta tcctttattt aatgtataac
    11101 ctttaggaac ttgatatatt tttatatctg ttacatcttt atttatttgc ccgatattat
    11161 taggataact tgagtggtaa gcttgaactt ttagtttggc atttgttaaa gaattttccg
    11221 atggatttac ataaatcgtt tgtttatagt accctggatt ttctttattt ccaacatgtg
    11281 aaactgtttc agtgaacgct gatccaattg aatttttctc atttacaaca taatctggat
    11341 attgaatgtt agcagttgtt tttgttgtag tattacctat cgtaacatta aactcaacat
    11401 cgtttttact aacaggaatt gtatcagcat ccatataaat tgaataatta attcccattt
    11461 gtacagaatt aaatcgatca acataatctg taaatgtata tgtaattaaa ttatttgcag
    11521 tatcatgttt tgcagtcgca attgtttcac cattatttgg atctttaata tcaccaatat
    11581 ttttaatatc ttccggattc aatccatata cttgtactgt atctgagtat ttaattgtga
    11641 aataatcacc tgatttaact ttgtcatcaa ctgtaatttg tgattttaat gataaataat
    11701 cttgggctgg tacgatttta ttgtttttat ctgcatcaac gacagttaat gttgtatttg
    11761 atgtgattaa atcattaaca tttttagcct ctgttgatga tggctgtact gctgctatac
    11821 gcattcttgt attcaaacgt ttaggtgctg tactttttgg caaaatgata tctgcattat
    11881 tttcattatt tgaattacta ttgttatcaa caagagtttc atcattactc ttgatagcat
    11941 cacttttaac atttaatgta gttgattcag ttttggcatc tacctttttg ttttcctcat
    12001 tagttggttg aacatttacc actgatttat tctcttgcaa atcaggttgt aacgcttctt
    12061 gattacttat agtttgttta gtgtttaaat cttcattcgt agattttggt gaagcttgct
    12121 catctgattt ggcagttgaa acttcaactt tatttccagt ggtagattgt acactttctt
    12181 tttctattaa tttattccca tttgaagtcg tttcattacc ttgagatgat accatttctt
    12241 tttgattatc atttttagta ttgtcttctt gatttagttg ctgcatatca actttatcac
    12301 tcgattgatt atcacttgct gaagttgtcg cttcgttcaa ttctttatta gtactttctg
    12361 cagcctttgc ttcttggttc cccagaccaa aaattaatgt tgtacctact aaaattgatg
    12421 ctgttcccac tgtgtacttt ctaatcgaaa atttatttaa tcgattggat accatgcctt
    12481 tccttgttat tgccgtttta ttttctctgt ttatcattag attactccta attcatcaaa
    12541 tttttaaata atacaattgt tttaaataca aaaatgtata tcaatatagt attacatttt
//
LOCUS       DALPQQ010000071        12583 bp    DNA     linear   BCT 22-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus strain K18-6-464
            SAMD00233528-rid16434743.denovo.071, whole genome shotgun sequence.
ACCESSION   DALPQQ010000071 DALPQQ010000000
VERSION     DALPQQ010000071.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMD00233528
            Sequence Read Archive: DRR236061
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 12583)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 12583)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001543423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001543423.1
            Genome Coverage       :: 77x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/22/2022 17:09:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,811
            CDSs (total)                      :: 2,743
            Genes (coding)                    :: 2,689
            CDSs (with protein)               :: 2,689
            Genes (RNA)                       :: 68
            rRNAs                             :: 2, 4, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 4, 2 (16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 54
            CDSs (without protein)            :: 54
            Pseudo Genes (ambiguous residues) :: 0 of 54
            Pseudo Genes (frameshifted)       :: 27 of 54
            Pseudo Genes (incomplete)         :: 27 of 54
            Pseudo Genes (internal stop)      :: 10 of 54
            Pseudo Genes (multiple problems)  :: 10 of 54
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..12583
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMD00233528-rid16434743.denovo.071"
                     /strain="K18-6-464"
                     /db_xref="taxon:1280"
                     /geo_loc_name="Japan: Niigata"
     gene            complement(18..179)
                     /locus_tag="O7798_001665"
     CDS             complement(18..179)
                     /locus_tag="O7798_001665"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500925.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDC2863924.1"
                     /translation="MLLILELRFWNLEFGFRNSTFGIQNYNEWKILIIACLMTWFCSD
                     FYLMNCFFV"
     gene            complement(216..956)
                     /locus_tag="O7798_001666"
     CDS             complement(216..956)
                     /locus_tag="O7798_001666"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500924.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent protein deacylase"
                     /protein_id="HDC2863925.1"
                     /translation="MFNLKHDLETLKHIIDSSNRITFFTGAGVSVASGVPDFRSMGGL
                     FDEISKDGLSPEYLLSRDYLEDDPEGFINFCHKRLLFVDTMPNIVHDWIAKLERNQQS
                     LGVITQNIDGLHSDAGSQHVDELHGTLNRFYCNVCHKSYTKSDVIDRTLKHCDNCGGA
                     IRPDIVLYGEMLDQPTIIRALNKIEHADTLVVLGSSLVVQPAAGLISHFKGDNLIIIN
                     KDRTPYDSDATLVIHDDMVSVVKSLMTE"
     gene            1162..1953
                     /locus_tag="O7798_001667"
     CDS             1162..1953
                     /locus_tag="O7798_001667"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500923.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DeoR/GlpR transcriptional regulator"
                     /protein_id="HDC2863926.1"
                     /translation="MTHRLNKGGNFTLNKHERLDEIAKLVNKKGTIRTNEIVEGLNVS
                     DMTVRRDLIELENKGILTKIHGGARSNSTFQYKEISHKEKHTRQIAEKRFIAKKAASL
                     IEDGDTLFFGPGTTVELLAEEVNHHTLTIITNCLPVYKILLEKQTAHFRVYLIGGEMR
                     HITEAFVGEMANAMLEKLRFSKMFFSSNAVNKGAVMTSTLDEAYTQQLALSNSIEKYL
                     LIDHTKVGKEDFTSFCQLNELTAVVMDYEDEEKVETIKTYIEVVD"
     gene            2321..2749
                     /gene="lacA"
                     /locus_tag="O7798_001668"
     CDS             2321..2749
                     /gene="lacA"
                     /locus_tag="O7798_001668"
                     /EC_number="5.3.1.26"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500922.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="galactose-6-phosphate isomerase subunit LacA"
                     /protein_id="HDC2863927.1"
                     /translation="MAIIIGSDEAGKRLKEVIKSYLLDNKYDVVDVTEGQEVDFVDAT
                     LAVAKDVQSQEGNLGIVIDAFGAGSFMVATKIKGMIAAEVSDERSGYMTRGHNNSRMI
                     TMGSEIVGDTLAKNVVKGFVEGKYDGGRHQIRVDMLNKMC"
     gene            2765..3280
                     /gene="lacB"
                     /locus_tag="O7798_001669"
     CDS             2765..3280
                     /gene="lacB"
                     /locus_tag="O7798_001669"
                     /EC_number="5.3.1.26"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500921.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="galactose-6-phosphate isomerase subunit LacB"
                     /protein_id="HDC2863928.1"
                     /translation="MKIALGCDHIVTDTKMRVFEFLKSKGHEVIDVGTYDFTRTHYPI
                     FGKKVGEQVVSGNADLGVCICGTGVGINNAVNKVPGVRSALVRDMTSALYAKEELNAN
                     VIGFGGRIIGELLMCDIIDAFINAEYKPTEENKKLIAKIKHLETSNADQADPHFFDEF
                     LEKWDRGEYHD"
     gene            3293..4225
                     /gene="lacC"
                     /locus_tag="O7798_001670"
     CDS             3293..4225
                     /gene="lacC"
                     /locus_tag="O7798_001670"
                     /EC_number="2.7.1.144"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500920.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tagatose-6-phosphate kinase"
                     /protein_id="HDC2863929.1"
                     /translation="MILTLTLNPSVDISYPLTALKLDDVNRVQEVSKTAGGKGLNVTR
                     VLAQVGEPVLASGFIGGELGQFIAKKLDHADIKHAFYNIKGETRNCIAILHEGQQTEI
                     LEQGPEIDNQEAAGFIKHFEQLLEKVEAVAISGSLPKGLNQDYYAQIIERCQNKGVPV
                     ILDCSGATLQTVLENPYKPTVIKPNISELYQLLNQPLDESLESLKQAVSQPLFEGIEW
                     IIVSLGAQGAFAKHNHTFYRVNIPTISVLNPVGSGDSTVAGITSAILNHENDHDLLKK
                     ANTLGMLNAQEAQTGYANLNNYDDLFNQIEVLEV"
     gene            4229..5209
                     /gene="lacD"
                     /locus_tag="O7798_001671"
     CDS             4229..5209
                     /gene="lacD"
                     /locus_tag="O7798_001671"
                     /EC_number="4.1.2.40"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500919.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tagatose-bisphosphate aldolase"
                     /protein_id="HDC2863930.1"
                     /translation="MSKSNQKIASIEQLSNNEGIISALAFDQRGALKRMMAKHQTEEP
                     TVAQIEQLKVLVAEELTQYASSILLDPEYGLPASDARNKDCGLLLAYEKTGYDVNAKG
                     RLPDCLVEWSAKRLKEQGANAVKFLLYYDVDDAEEINIQKKAYIERIGSECVAEDIPF
                     FLEVLTYDDNIPDNGSVEFAKVKPRKVNEAMKLFSEPRFNVDVLKVEVPVNMKYVEGF
                     AEGEVVYTKEEAAQHFKDQDAATHLPYIYLSAGVSAELFQETLKFAHEAGAKFNGVLC
                     GRATWSGAVQVYIEQGEDAAREWLRTTGFKNIDDLNKVLKDTATSWKQRK"
     gene            5231..5542
                     /locus_tag="O7798_001672"
     CDS             5231..5542
                     /locus_tag="O7798_001672"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500918.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS lactose/cellobiose transporter subunit IIA"
                     /protein_id="HDC2863931.1"
                     /translation="MNREEVQLLGFEIVAFAGDARSKFLEALTAAQAGDFAKADALIE
                     EGNNCIAEAHRAQTSLLAKEAQGDDIAYSVTMMHGQDHLMTTILLKDLMKHLLEFYKR
                     G"
     gene            5548..7260
                     /locus_tag="O7798_001673"
     CDS             5548..7260
                     /locus_tag="O7798_001673"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500917.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS transporter subunit EIIC"
                     /protein_id="HDC2863932.1"
                     /translation="MMQKLIAQIEKGKPFFEKLSRNIYLRAIRDGFISAMPVILFSSI
                     FLLIAYVPNIFGFKWDKGMEAILMKPYNYTMGLVAFLVAGTTAKSLTDSFNRKLESTN
                     QINFISTMLAAMCGFLFLASDPAKDGGFLSAFMGTKGLLTAFLSAFVTVIVYNFCVKR
                     NITIKMPKEVPPNISQVFKDLIPFSAVIIILYALDLVIRNSFKSNVAEGILKLFEPLF
                     TAADGWIGVTIIFGAFALFWFVGIHGPSIVEPAIAAITYANIEANFKLLQAGEHADKI
                     ITSGTQMFIVTFGGTGATLVVPFMFMWMTKSKRNKAIGRASVVPTFFGVNEPILFGAP
                     LVLNPVFFIPFVLAPIVNVWIFKLFVEVLGMNSFSVNLPWTTPGPLGIIMGTGFGLWS
                     FVLAITLIVVDIIIYYPFLKVYDSEILDEEEGRKESNSDLKEKVAANFDTKKADSILA
                     ASGVSDDAAKASNITEQTNVLVLCAGGGTSGLLANALNKAAEEYHVPVKAAAGGYGAH
                     MDIMKEYQLIILAPQVASNYEDIKQDTDRLGIKLAKTQGAEYIKLTRDGQAALDFVQQ
                     QFEN"
     gene            7278..8690
                     /gene="lacG"
                     /locus_tag="O7798_001674"
     CDS             7278..8690
                     /gene="lacG"
                     /locus_tag="O7798_001674"
                     /EC_number="3.2.1.85"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500916.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="6-phospho-beta-galactosidase"
                     /protein_id="HDC2863933.1"
                     /translation="MTKTLPEDFIFGGATAAYQAEGATNTDGKGRVAWDTYLEENYWY
                     TAEPASDFYNRYPVDLELSEKFGVNGIRISIAWSRIFPNGYGEVDPKGVEYYHKLFAE
                     CHKRHVEPFVTLHHFDTPEVLHKDGDFLNRKTIDYFVDYAEYCFKEFPEVKYWTTFNE
                     IGPIGDGQYLVGKFPPGIKYDFEKVFQSHHNMMVAHARAVKLFKDGGYKGEIGVVHAL
                     PTKYPFDPSNPEDVRAAELEDIIHNKFILDATYLGKYSRETMEGVQHILSVNGGKLNI
                     TDEDYAILDAAKDLNDFLGINYYMSDWMRGYDGESEITHNATGDKGGSKYQLKGVGQR
                     EFDVDVPRTDWDWMIYPQGLYDQIMRVVKDYPNYHKIYITENGLGYKDEFIESEKTVH
                     DDARIDYVRQHLNVIADAIIDGANVKGYFIWSLMDVFSWSNGYEKRYGLFYVDFETQE
                     RYPKKSAYWYKELAETKEIK"
     gene            8956..9825
                     /locus_tag="O7798_001675"
     CDS             8956..9825
                     /locus_tag="O7798_001675"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000719336.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HDC2863934.1"
                     /translation="MKKIFVIITTLLAVAIIIGSIIMVVFSQRQAQTFKIQQQQFVKK
                     PIPTLFLHGFGGSANSEKFMVKQAEKRGVTKDIITAYVSKDGAVTFKGKLRKDAVNPI
                     VKIELENNRQGYLDKNAAWFKNVLTKLQSEYNFDKFNFVGHSMGNLTFAQYMMTYGND
                     KSLPQLNKQVNIAGTFNGVLNMNEDVNEITVDKDGKPSRMNQPYQQLRVLKDIYKGKG
                     IEVLNIYGDLKDGTHSDGRVSNSSSKSLKYLLGNSPKSYRESKYEGEPAQHSQLHENE
                     NVANELIDFLWKK"
     gene            10108..11109
                     /locus_tag="O7798_001676"
     CDS             10108..11109
                     /locus_tag="O7798_001676"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500914.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADP-dependent oxidoreductase"
                     /protein_id="HDC2863935.1"
                     /translation="MQNKQILFNKIPEGMPQEDTFKIEEIDTPKLESDGVLVQTLYIS
                     VDPYMRGRMTKADSYVQPFEIGKPIVSHVVAKVIDSTLADYKKGDVVVGMLPWRIINH
                     VQADQITKVPTTDVPLDLYLSVLGMPGQTAYHGLLDIGQPKAGDTVVVSAASGAVGSV
                     VGQIAKIKGCRVVGIAGGDKKVNYLTETLGFDAGIDYKKEDFAEALAQAVPDGIDVYF
                     ENVGGTVGDEVFKHLNRFARVPVCGAISSYNHPEADIGPRIQGTLIKKQVMMRGFLVS
                     EFANAFKEASEQLATWVQEGKIQSQVTIEDGFENAPHAFKNLFTGDNFGKQVIKVTE"
     gene            11343..12344
                     /locus_tag="O7798_001677"
     CDS             11343..12344
                     /locus_tag="O7798_001677"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500913.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc-binding alcohol dehydrogenase family
                     protein"
                     /protein_id="HDC2863936.1"
                     /translation="MKMIGFEKPFKLEEGNLFKVYEQRKPTPENDDILVKVNSISVNP
                     VDTKQRQMEVTQAPRVLGFDAIGTVEAIGPDVTLFSPGDVVFYAGSPNRQGSNATYQL
                     VSEAIVAKAPHNISANEAVSLPLTGITAYETFFDTFKISTNPAENEGKSVLIINGAGG
                     VGSIATQIAKRYGLTVITTASRQETTEWCEKMGADIVLNHKEDLVRQFKEIPLVDYIF
                     CTYNTDLYYNTMIELIKPLGHITTIVAFNEDQDLNALKLKSITFTHEFMFARPIHRTP
                     DMIKQHEYLEDITKNIESGHYQPTTTQVFEGLSPENLYQAHQLLEKQSMIGKLVINI"
BASE COUNT         4494 a         1868 c         2424 g         3797 t
ORIGIN      
        1 aaagtagcat cccaacatca aacaaaaaaa caattcatca aataaaaatc gctacaaaac
       61 caagtcatta aacacgcaat aattaaaatt ttccactcat tataattctg aattccaaat
      121 gtcgaattcc gaaaaccaaa ctccaaattc caaaaacgca actccaaaat taaaagcatt
      181 tccctaccat tcgggaaatg ctttttacat actgattact ctgtcattaa tgattttaca
      241 acggaaacca tgtcgtcatg tatgaccaaa gtagcgtcgc tatcataagg tgttcgatct
      301 ttattgataa taattaaatt gtcgccttta aaatgtgata ttaatcctgc ggcaggttgt
      361 acaacgagtg atgaacctag tacaacaagg gtgtcagcat gttcaatttt atttaatgcc
      421 cttatgatgg taggttgatc taacatttca ccgtataata cgatgtccgg tcgaatggca
      481 ccaccacaat tatcacaatg tttcaaagtt ctatcaataa catctgactt cgtataagat
      541 ttatgacata cattacaata aaaacgattt aacgtgccat gtaattcatc aacatgttga
      601 cttccagcgt ctgagtgcaa accatcgata ttttgcgtga tgacacctaa agattgttga
      661 ttacgttcta attttgcaat ccaatcatga acgatattgg gcatcgtatc gacaaatagt
      721 aagcgcttat ggcagaaatt gataaaacct tcaggatcat cttctaaata atcacggctt
      781 aacaagtatt ctggcgaaag cccatctttt gaaatttcat caaataagcc acccattgaa
      841 cggaaatctg gaacgccact tgcgacagat acaccagcac ctgtaaaaaa tgtaatacga
      901 ttcgaactat ctataatatg ttttagtgtc tctaaatcat gtttcaagtt aaacacccca
      961 tcaaaataat gaatgattta taacgtcttt tacttttatt atagtatatt cattttacga
     1021 ttatcaaaag cgcagtttaa acagttcttt ttaaaaatga attatacata taatcgaaca
     1081 gttaaattat attagttttt acgcaatttt tattatagaa taagcatgta tattaaaatt
     1141 gatgtctaaa cataaaggat aatgacccat cgcctaaata aaggaggcaa ttttacattg
     1201 aataaacatg aacgtttgga cgaaattgct aaactagtga ataaaaaggg cacgataaga
     1261 acgaatgaaa tcgtcgaagg tttaaatgtg tctgatatga cagttcgaag agatttaatt
     1321 gaattggaaa ataaagggat tttaacgaag attcatggtg gtgcacgcag taattcaaca
     1381 tttcagtata aagaaatatc gcataaagaa aaacataccc gtcaaattgc agaaaaacga
     1441 tttatagcta aaaaagctgc atcattaatt gaagatgggg atactttgtt tttcggacca
     1501 ggaacaacag tggaactatt agcagaagaa gtcaatcatc atacgctcac aattattacg
     1561 aattgtttgc cggtgtataa aattttgtta gaaaaacaaa cagcacattt tcgtgtctat
     1621 ttaattggtg gtgaaatgcg ccatattaca gaagcatttg taggtgaaat ggcgaacgcc
     1681 atgttggaaa aactaagatt tagcaagatg ttctttagta gtaacgcagt aaataaaggt
     1741 gctgtgatga catctacatt agatgaagcc tatacgcaac aactggcact aagtaattca
     1801 attgaaaaat acttgttaat cgatcatacg aaagttggca aagaagattt tacatcattt
     1861 tgtcagttaa acgaattgac tgcagtggtc atggactatg aagatgaaga aaaagtagaa
     1921 acgattaaaa catatattga agtagtcgac taaattaaaa gtataactgc attgttaaaa
     1981 tatgtatcta tatgctcata agtgaatgtg aatttgcatt catttatggg ctatttttta
     2041 tgcaaattta tgtcaacggg aacctcgaca aagttttact acaatttcag acgaatacct
     2101 aattaaaaca acaccacaat atgaatgttc acttattgtt tgaaaatacg tcataaacaa
     2161 acatattata aacatattat gttgatttat tgtttgttta tgtttataat ttaaacgtaa
     2221 tcaaattgaa agccttttct caagattttc ataacctaca aataaatatg tcacatttta
     2281 agaaaggtat ttcaaaatta aagtaaaaag gagtcttatt atggcgatta ttattggttc
     2341 agatgaagct ggcaaacgat taaaagaagt catcaaatca tacttattag acaataaata
     2401 tgatgttgtt gacgtaacag aaggacagga agttgacttt gttgatgcaa ctttggctgt
     2461 agcaaaagat gttcaaagtc aagaaggtaa cttaggtatt gttatcgatg catttggtgc
     2521 aggtagcttt atggttgcta caaaaatcaa aggcatgatt gctgctgaag tatcagatga
     2581 acgctctgga tatatgacta gaggccataa caattcaaga atgatcacta tgggatctga
     2641 aattgttgga gacacattag cgaaaaatgt cgttaaaggt tttgttgaag gtaaatacga
     2701 tggtggtaga caccaaatcc gcgtagatat gcttaataaa atgtgctaag gaggaaaaat
     2761 tactatgaag attgcattag gatgcgacca tattgttaca gatacaaaaa tgcgtgtatt
     2821 tgaattttta aaatcaaaag gacatgaagt cattgacgta ggaacatacg atttcacaag
     2881 aacacattat ccaatttttg gtaaaaaagt tggcgaacaa gttgttagcg gtaatgcaga
     2941 cttaggtgtt tgtatttgtg gaacaggtgt tggtattaac aatgctgtaa ataaagtacc
     3001 tggcgttcgt tcagcactag tacgtgatat gacatcagcg ttatacgcta aagaagaatt
     3061 aaatgcgaac gttattggct tcggtggacg tattataggt gagttattaa tgtgcgatat
     3121 tatcgatgca tttattaatg ctgaatataa accaactgaa gagaacaaaa aattaatcgc
     3181 taaaattaaa catttagaaa caagcaatgc agatcaagct gatccacatt tctttgatga
     3241 attcttagaa aaatgggaca gaggcgaata ccacgattaa gggacgacac atatgatttt
     3301 aactttaaca ttaaatccat ccgttgatat ttcataccca ttaacagcat tgaaattaga
     3361 tgatgttaat cgtgttcaag aagtaagtaa aacagctggt ggtaaaggtt taaatgtaac
     3421 aagagtactt gcgcaagtag gtgagccagt ccttgcgagt ggttttattg gcggtgaatt
     3481 aggtcaattt attgctaaaa aattagatca tgccgacatc aagcatgcat tttataacat
     3541 taagggtgaa acacgaaact gcattgcaat tttacatgaa gggcaacaaa cagaaatttt
     3601 agagcaggga ccggagattg ataatcaaga ggctgcagga tttattaaac attttgaaca
     3661 attattagaa aaagttgaag cagttgctat ttcaggtagc ttacctaaag gattaaatca
     3721 agattattat gcacaaatca ttgaacgatg ccaaaacaaa ggtgtgcctg tgatattaga
     3781 ttgctcgggt gcaactttgc aaacagtttt ggaaaatcca tacaaaccta cagtcattaa
     3841 accaaacatt tctgaactat atcaattgct taaccagcca cttgatgaaa gtttagaaag
     3901 tttgaaacag gcagtgtcac aacccttatt cgaagggatt gagtggatta ttgtgtcttt
     3961 aggtgcacaa ggtgcattcg ctaagcacaa tcatacattc tatagagtga atattccgac
     4021 aataagtgta ttaaatccgg ttggttcagg tgattctaca gttgctggaa ttacttcagc
     4081 aattcttaat catgaaaacg accacgattt actaaaaaaa gccaatactt taggcatgct
     4141 gaatgcacaa gaagcacaaa caggttatgc caatttaaat aattatgatg atttattcaa
     4201 tcaaattgaa gttttagagg tgtaaaaaat gtcaaaatcg aatcaaaaaa tcgcatcaat
     4261 tgaacaatta agtaacaacg aaggtatcat ttctgcatta gcatttgacc aacgtggtgc
     4321 tttaaaacgc atgatggcaa aacatcaaac tgaagaacca actgtagctc aaattgaaca
     4381 attaaaagta ttagttgcgg aagaattaac acaatatgca tcttcaattt tattagatcc
     4441 tgaatatggt ttaccagctt cagatgcacg taacaaagat tgtggattat tacttgctta
     4501 tgaaaaaact ggatatgacg taaacgctaa aggtcgttta cctgactgtt tagtagagtg
     4561 gtctgcaaaa cgtttaaaag aacaaggcgc aaatgctgtt aaattcttac tttactatga
     4621 tgttgatgat gctgaagaaa ttaacattca aaagaaagca tacattgaaa gaatcggttc
     4681 agaatgtgtt gcagaagata ttccattctt tttagaagta ttaacatacg atgacaacat
     4741 tcctgataac ggtagtgttg aattcgcaaa agttaagcct agaaaggtta acgaagcaat
     4801 gaaattattc tcagaaccac gctttaacgt tgatgtattg aaagttgaag taccagtaaa
     4861 catgaaatat gtagaaggct ttgctgaagg tgaagtggtt tatacaaaag aggaagcggc
     4921 acaacacttt aaagatcaag atgcagcaac tcatttacca tacatttact taagtgctgg
     4981 tgtttctgcg gaattattcc aagaaacttt aaaatttgct cacgaagctg gtgctaaatt
     5041 caacggggta ctttgtggcc gtgctacatg gtctggtgct gttcaagtat acattgaaca
     5101 aggtgaagat gctgctcgtg aatggttacg tacaactggt ttcaaaaata ttgatgactt
     5161 aaataaagta ttaaaagata ctgcgacatc ttggaaacaa agaaaataag tttaaaaggg
     5221 gattaatgct atgaatagag aagaagtcca attattaggt tttgaaattg ttgcatttgc
     5281 aggggatgca cgttctaagt ttttagaagc attaacagca gctcaagctg gagattttgc
     5341 aaaagcagat gcactgattg aagaaggaaa caattgcatt gcggaagcgc atagagcaca
     5401 aacaagcctg ttggctaaag aagcgcaagg tgatgatatt gcatacagtg taacgatgat
     5461 gcatggtcaa gatcatttaa tgacaacaat tttactgaaa gatttaatga agcatttatt
     5521 agaattttat aaaagagggt gatgacaatg atgcaaaaat tgatcgcaca aattgaaaaa
     5581 gggaagccat ttttcgagaa attatcacgt aacatatatt taagagccat ccgtgatgga
     5641 tttatttctg caatgcctgt catcttattc tcaagtatct ttctattaat tgcatatgtg
     5701 ccaaatatat ttggttttaa atgggataaa ggcatggaag ccattttaat gaaaccatat
     5761 aactatacga tggggcttgt agcattttta gtagcaggaa cgacagcgaa atctttaaca
     5821 gattcattta accgtaagct agaaagtaca aatcaaatta actttatttc tacaatgcta
     5881 gcagcgatgt gtggattctt gttcttagct tctgatccag ccaaagatgg tggattctta
     5941 agtgcattta tgggaactaa aggtttatta acagcattct tatcagcatt tgtaactgtt
     6001 attgtttata acttctgtgt gaagcgcaat attacaatta aaatgccgaa agaagtaccg
     6061 ccgaatattt cacaagtatt taaggactta attccatttt cagcggtaat catcattctt
     6121 tatgcattag atttagtcat tcgcaacagc tttaaatcaa atgtagcgga aggtatttta
     6181 aaattattcg aaccattatt tacagcagca gatggatgga ttggtgtcac aattatcttt
     6241 ggtgcctttg cattattctg gtttgtaggt attcatggtc cgtcaattgt agagccagca
     6301 attgcagcca ttacatatgc gaatatcgaa gcgaacttca agttgcttca agctggagaa
     6361 cacgcagata aaattattac atcaggtaca caaatgttta tcgttacatt tggaggtacg
     6421 ggtgcaacat tggtcgtccc gttcatgttt atgtggatga cgaaatctaa acgaaacaaa
     6481 gcgattggac gtgcatcagt tgtaccaaca ttctttggtg taaacgaacc aattttattt
     6541 ggtgcaccac tagtattgaa tcctgtgttc tttattccat ttgtattagc accaattgtt
     6601 aacgtatgga ttttcaaact tttcgttgaa gtgttaggaa tgaatagttt tagtgtgaat
     6661 ttaccttgga caacaccagg tccattgggc attatcatgg gtacaggttt tggtttatgg
     6721 tcattcgtac tagctattac tttgattgtt gtagatatta ttatttacta cccattccta
     6781 aaagtttatg atagtgaaat tcttgatgaa gaagaaggac gtaaagaaag taattcagat
     6841 ttaaaagaaa aagttgcagc aaactttgat acgaaaaaag ctgattcaat tttagcggca
     6901 agtggtgtat cagacgatgc agctaaagct tcaaatatca cagaacaaac aaatgtctta
     6961 gtactttgtg ccggtggtgg tacaagtgga ttattagcca atgcacttaa taaagcagct
     7021 gaagaatatc atgtgccagt gaaagcggca gctggcggat atggcgcaca tatggacatt
     7081 atgaaagagt accaattaat cattttagcg ccacaagttg cgtctaacta tgaagatatt
     7141 aagcaagata cagatagatt aggtattaaa ttagcgaaga ctcaaggtgc tgaatatatc
     7201 aaattgacac gagatggcca agcagccctt gatttcgttc aacaacaatt tgaaaattaa
     7261 gaataggagt ttttcatatg actaaaacat tacctgaaga ttttattttt ggtggagcaa
     7321 cagcagcata tcaagcagaa ggtgcgacaa atacggatgg taaaggtcgc gtagcatggg
     7381 atacgtattt agaagaaaac tattggtaca ctgcagaacc agcgagtgat ttttataaca
     7441 gatatccagt ggatttagaa ttaagtgaaa aattcggtgt taatggtatc cgaatttcaa
     7501 ttgcatggtc tcgtatcttc ccaaatggat atggcgaagt tgaccctaaa ggtgttgagt
     7561 attaccataa gttatttgca gagtgtcata aacgtcatgt tgaaccattt gtaacattgc
     7621 atcattttga tacaccagaa gtgttacaca aagatggcga ttttctaaat cgtaaaacga
     7681 ttgactactt tgtagattat gctgaatatt gttttaaaga attcccagaa gtaaaatatt
     7741 ggactacatt caatgaaatt ggacctattg gtgatggtca atatttagta ggtaaatttc
     7801 ctccaggtat taaatatgat tttgaaaaag tattccaatc acatcataac atgatggtgg
     7861 ctcatgctag agcagtaaaa ttatttaaag atggcggata caaaggagaa attggtgttg
     7921 tacacgcatt gccaacaaaa tatccgttcg atccatcaaa tcctgaagat gttcgtgcag
     7981 cagaattaga agatatcatc cataataaat tcatcttaga tgcaacatat ttaggtaagt
     8041 attctcgtga aacgatggaa ggtgtgcaac atatcttatc tgttaatggc ggtaaattaa
     8101 acattacaga tgaagattat gccattttag atgcagccaa agatttaaac gacttcttag
     8161 gtatcaatta ctacatgagt gattggatga gaggttacga tggagaatct gaaatcacgc
     8221 ataatgcgac aggtgataaa ggcggttcta aataccaact taaaggtgtc ggacaacgtg
     8281 aatttgatgt cgacgtacct cgcacagact gggactggat gatctatcct caaggtttat
     8341 atgatcaaat catgcgtgtt gttaaagatt atcctaacta tcataagatt tatatcactg
     8401 aaaatggttt aggatataaa gatgagttta ttgaatctga aaaaacagtt catgatgatg
     8461 cacgtattga ttatgtaaga caacatttga acgttattgc agatgctatt atagatggtg
     8521 caaatgttaa aggttacttt atttggtcat taatggatgt gttctcttgg tcaaatggtt
     8581 atgaaaaacg atatggttta ttctatgtcg attttgagac tcaagaacgt tatcctaaga
     8641 aaagtgctta ttggtacaaa gagttagccg aaacaaaaga aattaaataa ttatagatat
     8701 taaaaggcct atcagtcgag tgctggtagg tctttattta tagaaagaga taaattaaac
     8761 atgcatatac atatttatat attaatcaat gggtgacaca ccattgaaag ctaaagaagc
     8821 aatcaattaa caaacgttaa cggacaactt tccaaagtca tcttaaaagt taatgatgta
     8881 ttcaaaatca actaaaggac atttttaatc acatccttta tacttatata aaagacatga
     8941 atgggagtta aaagtgtgaa gaaaattttt gtaattatta cgacattgtt agcggtcgct
     9001 attattatag gctctattat tatggtggtg tttagtcaac gacaggcaca aacatttaaa
     9061 atacaacaac agcaatttgt taaaaagcca attccaacat tgttcttaca tggatttggt
     9121 ggtagtgcca attctgaaaa gtttatggtg aagcaagcag aaaaaagagg ggtaactaaa
     9181 gatatcatca ctgcttacgt ttcaaaggat ggtgcagtga catttaaagg gaaactaaga
     9241 aaagatgcag tgaatcctat tgtgaaaatt gaacttgaaa ataacagaca aggctatttg
     9301 gataagaatg ctgcgtggtt taaaaatgta ctgactaagt tacaatctga atacaatttc
     9361 gataaattca actttgtcgg tcactcaatg gggaacttaa catttgcaca atatatgatg
     9421 acatatggta acgacaagtc actgccacag ttaaacaaac aagtgaatat tgcagggaca
     9481 tttaatggtg ttttaaatat gaatgaagat gtcaatgaaa ttacagttga taaagatggt
     9541 aaaccaagtc gaatgaatca accttatcag caattacgcg tgctaaaaga tatttataaa
     9601 ggtaaaggta tcgaagtgct aaatatttat ggggatttga aagatggtac acattcagac
     9661 ggcagagtgt ctaatagttc ttcgaaatca ttaaaatatt tactgggaaa tagtccgaaa
     9721 agttatcgag aatctaaata tgaaggtgag cctgcacaac atagtcagct tcatgagaat
     9781 gaaaatgttg ctaatgagtt aatcgacttc ttatggaaaa aataaagcaa ctgctagttt
     9841 ttctggggca aaaaagcttg taatattaga gcttttcaaa aattatctat tgtttgagag
     9901 tttccataaa atgtctaagt cgtaacattt taaatttatg attatagcaa atataatgtg
     9961 gttgaagtta catgaatgaa tcagtgctta agtcaaaata taacaactaa gaatgtattt
    10021 gcatacagac atcacgaaga cacaattcaa acttaacgct taagtaacaa ataagtaaaa
    10081 gtttcaaata aagaaaggtg attaatgatg caaaataaac aaattctttt taacaaaata
    10141 ccagaaggca tgcctcaaga ggatacattc aaaattgaag agattgacac gcctaaactt
    10201 gagagcgatg gtgtacttgt acaaacgctg tatatttcag tggatccata tatgagagga
    10261 cgtatgacta aggcagattc gtatgtacag ccttttgaaa ttggtaaacc gattgttagc
    10321 catgtcgttg caaaagtaat tgattcgaca ctcgcagatt ataaaaaagg agatgtcgtt
    10381 gtaggtatgt tgccttggcg aatcattaat catgtccaag cggatcaaat tactaaagtt
    10441 ccaacgacag atgtaccact tgatttatat ttaagtgttt taggaatgcc aggacaaaca
    10501 gcatatcatg gtctgcttga tattggacaa cctaaagccg gtgatactgt tgtggtttca
    10561 gctgcatctg gtgctgtagg ttcagttgta ggtcaaattg ctaagattaa aggttgccgt
    10621 gtagtaggta ttgcgggtgg cgacaaaaaa gtaaattatt taacagagac actgggcttt
    10681 gacgctggta ttgattataa gaaagaggat tttgcagaag cgttagcaca agcagtacca
    10741 gatggtattg atgtttattt tgaaaatgtt ggtggaacag ttggcgatga agtatttaag
    10801 catttaaatc gttttgcacg tgtaccagta tgtggcgcaa tttcgtcata taatcatcct
    10861 gaagccgata tcggaccacg tattcaaggt acgcttatta agaagcaagt aatgatgaga
    10921 ggcttcttgg taagtgaatt cgctaatgct tttaaagaag ctagtgaaca gcttgcaaca
    10981 tgggttcaag aaggtaaaat tcagtcacaa gtaaccattg aagatggttt tgaaaatgcg
    11041 ccacatgcat ttaaaaattt atttactggc gataactttg gtaaacaagt tattaaagta
    11101 acggaataat aaagtatacg ttttaacaaa ctaactttgt taattgacca aaatttaata
    11161 attttttatc taaagtaaat ttgttcagca acatggtaga aataagtcta aaatttaata
    11221 cgaaagtcgt ctgtaattat ttatatattc aaatgaaaaa ggagtcatga tgctgcgata
    11281 taagcacaca tggcttctat tttgtataat aagaaataag ttcataaatg aggtgaaacg
    11341 atatgaaaat gataggattt gagaagccct ttaaattgga agaaggaaat ttatttaaag
    11401 tatacgaaca aagaaagcca acgccagaaa acgatgatat cttagtcaaa gtaaatagca
    11461 ttagtgtaaa tcctgtagat acaaagcaac gacaaatgga agtcactcaa gcacctcgtg
    11521 tacttgggtt tgatgctatt ggtactgttg aagctatcgg accagacgtt acattattta
    11581 gtccgggtga cgttgtattt tatgctggat cgccaaatag acaaggatca aatgcgacat
    11641 atcaattggt gtcagaagct atagttgcaa aagcaccaca caacataagt gctaatgaag
    11701 cggttagtct accgctaact ggtattacgg catatgaaac gttttttgat acatttaaaa
    11761 tttctacgaa tcctgctgaa aacgaaggga agtctgtctt aatcattaat ggtgccggtg
    11821 gtgtaggcag tatagccact caaattgcta aacggtatgg tttaactgtc attacaacag
    11881 catcacgaca agaaacaaca gagtggtgtg aaaagatggg cgcagatatc gtattgaatc
    11941 ataaagagga tttagtgcgt caatttaaag aaattccatt agtagattat atattttgca
    12001 cctataatac agacttgtat tacaatacta tgattgaact gataaaacca ttagggcata
    12061 ttacgactat cgtagctttt aatgaagatc aagatttaaa tgcattaaaa ttaaaaagta
    12121 taacatttac acatgaattt atgtttgcgc gtccaattca tcgaacgcct gatatgatta
    12181 aacaacatga gtatttagaa gatattacga aaaatataga atcagggcat taccaaccaa
    12241 caacgacaca agtttttgaa ggtttatcac ctgaaaactt atatcaagca catcaattgt
    12301 tggaaaaaca atcaatgatt ggaaaattag taattaatat atagattagt aagtaaagtc
    12361 gccttatgca gaaaatactg tataggcgac ttattttttg tgtctagcga ctattgattc
    12421 taaacggaaa tatggcaact ttgcaggtat caaatcaata atgcactaga aaggcattac
    12481 ttaaatacaa taaaatactt tgttgctcaa tgataaataa tttgagtgtg ttttatatat
    12541 catttttaaa agatgaggca ttattaattg tgtctatata aaa
//
LOCUS       DALPQQ010000072        12210 bp    DNA     linear   BCT 22-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus strain K18-6-464
            SAMD00233528-rid16434743.denovo.072, whole genome shotgun sequence.
ACCESSION   DALPQQ010000072 DALPQQ010000000
VERSION     DALPQQ010000072.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMD00233528
            Sequence Read Archive: DRR236061
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 12210)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 12210)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001543423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001543423.1
            Genome Coverage       :: 77x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/22/2022 17:09:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,811
            CDSs (total)                      :: 2,743
            Genes (coding)                    :: 2,689
            CDSs (with protein)               :: 2,689
            Genes (RNA)                       :: 68
            rRNAs                             :: 2, 4, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 4, 2 (16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 54
            CDSs (without protein)            :: 54
            Pseudo Genes (ambiguous residues) :: 0 of 54
            Pseudo Genes (frameshifted)       :: 27 of 54
            Pseudo Genes (incomplete)         :: 27 of 54
            Pseudo Genes (internal stop)      :: 10 of 54
            Pseudo Genes (multiple problems)  :: 10 of 54
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..12210
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMD00233528-rid16434743.denovo.072"
                     /strain="K18-6-464"
                     /db_xref="taxon:1280"
                     /geo_loc_name="Japan: Niigata"
     gene            34..558
                     /locus_tag="O7798_001678"
     CDS             34..558
                     /locus_tag="O7798_001678"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500148.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="shikimate kinase"
                     /protein_id="HDC2863937.1"
                     /translation="MNHDKSPIILIGFMGTGKSTIGKYVADEQNLSFIDIDSYIEEKY
                     KLTIPEIFCKHGEQYFRNLEFTCLQECINTADIIATGGGIIESEEAFNFLKNQKNIIW
                     LDCNIDIIYSRINDDPHRPNANNKTIKQLNDLYCSRNLRYNEIAFKKFDSHLLSISEI
                     YYELLNLIKASDQY"
     regulatory      545..642
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00504"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="glycine riboswitch; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /bound_moiety="glycine"
                     /db_xref="RFAM:RF00504"
     gene            717..1808
                     /gene="gcvT"
                     /locus_tag="O7798_001679"
     CDS             717..1808
                     /gene="gcvT"
                     /locus_tag="O7798_001679"
                     /EC_number="2.1.2.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500147.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycine cleavage system aminomethyltransferase
                     GcvT"
                     /protein_id="HDC2863938.1"
                     /translation="MSSDLKQTPLYQNYVDRGAKIVEFGGWAMPVQFSSIKEEHNAVR
                     YEIGLFDVSHMGEIEVTGKDASQFVQYLLSNDTDNLTTSKALYTALCNEEGGIIDDLV
                     IYKLADDNYLLVVNAANTEKDFNWILKHKEKFDVEVQNVSNQYGQLAIQGPKARDLIN
                     QLVDEDVTEMKMFEFKQGVKLFGANVILSQSGYTGEDGFEIYCNIDDTEKIWDGLLEY
                     NVMPCGLGARDTLRLEAGLPLHGQDLTESITPYEGGIAFASKPLIDADFIGKSVLKDQ
                     KENGAPRRTVGLELLEKGIARTGYEVMDLDGNIIGEVTSGTQSPSSGKSIALAMIKRD
                     EFEMGRELLVQVRKRQLKAKIVKKNQIDK"
     gene            1828..3174
                     /gene="gcvPA"
                     /locus_tag="O7798_001680"
     CDS             1828..3174
                     /gene="gcvPA"
                     /locus_tag="O7798_001680"
                     /EC_number="1.4.4.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500146.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminomethyl-transferring glycine dehydrogenase
                     subunit GcvPA"
                     /protein_id="HDC2863939.1"
                     /translation="MSHRYIPLTEKDKQEMLQTIGAKSIGELFGDVPSDILLNRDLNI
                     AEGEAETTLLRRLNRIASKNITKEMHTSFLGAGVYDHYAPSVVDAMISRSEFYTAYTP
                     YQPEISQGELQAIFEFQTLICELTDMDVANSSMYDGMTSFAEACILAFSQTKKNKIVV
                     SKGLHYQALQVLHTYAKTRKEFEVVEIDLDGTVTDLKKLEAAVDDETAAVAVQYPNFY
                     GSIEDLEKIHSFIEDKKALFIVYANPLALGLLTPPGSFGADIVVGDTQPFGIPAQFGG
                     PHCGYFATTKKLMRKVPGRLVGQTQDDEGNRGFVLTLQAREQHIRRDKATSNICSNQA
                     LNALASSIAMSALGKQGIYDIAVQNIEHANYAKQQFIKKGFEVLDGTSFNEFVVKFDK
                     PIQQVNEELVKYNIIGGFDLGVVSDDFKNHMLIAVTELRTKDEIDTFVEKAGELND"
     gene            3167..4639
                     /gene="gcvPB"
                     /locus_tag="O7798_001681"
     CDS             3167..4639
                     /gene="gcvPB"
                     /locus_tag="O7798_001681"
                     /EC_number="1.4.4.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500145.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminomethyl-transferring glycine dehydrogenase
                     subunit GcvPB"
                     /protein_id="HDC2863940.1"
                     /translation="MTSKSSPLIFERSREGRYAYSLPKSDIKTNSVESLLDDKFIRKN
                     KAEFPEVAELDLVRHYTELSNKNFGVDNGFYPLGSCTMKYNPKINEKVARIPGFSESH
                     PLQDEDQVQGSLEIIYSLQEELKEITGMDEVTLQPAAGAHGEWTALMIFKAYHENNGE
                     GHRDEVIVPDSAHGTNPASASFAGFKSVTVKSNERGEVDIDDLKRVVNENTAAIMLTN
                     PNTLGIFEKNIMEIREIVHNAGGLLYYDGANLNAIMDKVRPGDMGFDAVHLNLHKTFT
                     GPHGGGGPGSGPVGVVKELASYLPKPMVIKDGDKFKYDNDIKNSIGRVKPFYGNFGIY
                     LRAYTYIRTMGATGLKEVSEAAVLNANYIKARLSKHFEIPYKQYCKHEFVLSGVRQKE
                     FGVRTLDMAKRLLDFGVHPPTIYFPLNVEEGMMIEPTETESKETLDYFIDTLISIAEE
                     AKNDPDKVLEAPHTTVIDRLDEATAARKPILKFENLKQEK"
     gene            complement(5004..5390)
                     /locus_tag="O7798_001682"
     CDS             complement(5004..5390)
                     /locus_tag="O7798_001682"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500144.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rhodanese-like domain-containing protein"
                     /protein_id="HDC2863941.1"
                     /translation="MSASLYIAIILVIAIIAYMIVQQILNKRAVKELDQNEFHNGIRK
                     AQVIDVREKVDYDYGHINGSRNIPMTMFRQRFQGLRKDQPVYLCDANGIASYRAARIL
                     KKNGYTDIYMLKGGYKKWTGKIKSKK"
     gene            5548..6378
                     /locus_tag="O7798_001683"
     CDS             5548..6378
                     /locus_tag="O7798_001683"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500143.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoate--protein ligase family protein"
                     /protein_id="HDC2863942.1"
                     /translation="MTETWNFINTGSKDPYYNMAMDEALLNFVSRGEIDPVIRFYTWN
                     PATLSIGYFQRLQKEIDIDKVKEKGFGLVRRQTGGRGVLHDKELTYSVIVPESHPNMP
                     STVTEAYRVISQGLLEGFKNLGFDTYFAVPKTPEERQKLKQPRSSVCFDAPSWYELVV
                     EGRKIAGSAQTRQKGVILQHGSILQDIDIDELFDMFIYKNERLKLKMKEAFVEKAVAI
                     NDISDEHITISQMEEAFEKGFKKGLNIELKPLELTEAQLAEVEELTEKYRSDEWMFRK
                     "
     gene            complement(6442..6660)
                     /locus_tag="O7798_001684"
     CDS             complement(6442..6660)
                     /locus_tag="O7798_001684"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500142.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDC2863943.1"
                     /translation="MRNIIFYLVLIIAAIGLVMNLDAFIFSIVRMLISFAVIAGIIYL
                     IYYFFILTEDQRKYRKAMRKYKRNQRRK"
     gene            complement(6674..7255)
                     /locus_tag="O7798_001685"
     CDS             complement(6674..7255)
                     /locus_tag="O7798_001685"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500141.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDC2863944.1"
                     /translation="MKKLVSIVGATLLLAGCGSQNLAPLEEKTTDLREDNHQLKLDIQ
                     ELNQQISDSKSKIKGLEKDKENSKKTASNNTKIKLMNVTSTYYDKVAKALKSYNDIEK
                     DVSKNKGDKNVQSKLNQISNDIQSAHTSYKDAIDGLSLSDDDKKTSKNIDKLNSDLNH
                     AFDDIKNGYQNKDKKQLTKGQQALSKLNLNAKS"
     gene            7360..8421
                     /locus_tag="O7798_001686"
     CDS             7360..8421
                     /locus_tag="O7798_001686"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500140.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminopeptidase P family protein"
                     /protein_id="HDC2863945.1"
                     /translation="MSRITQVHRILEQKHLDAIIILSDYNRRYLSGFTGTSGALIISK
                     DKQYLITDFRYIDQATKQAPNYEIINRKSTIIGEIKELLHQENFENVGFEGHHVSYDT
                     YLELNKSRISLISISNTVDKIRDVKDADEIALIQKAANIVDETYEYILTVVKAGMTEK
                     ELKAILESKMLELGADGPSFDTIVASGHRGALPHGVASDKIIEKGDMITLDFGAYYNG
                     YCSDITRTFAIGEPDPKLKEIYQIVLESQMKAINEIRPGMTGAEADAISRNYLESKGY
                     GKEFGHSLGHGIGLEIHEGPMLARTIQDKLQVNNCVTVEPGVYIEGLGGIRIEDDILI
                     TENGCQVFTKCTKDLIVLT"
     gene            8447..9004
                     /gene="efp"
                     /locus_tag="O7798_001687"
     CDS             8447..9004
                     /gene="efp"
                     /locus_tag="O7798_001687"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000626504.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor P"
                     /protein_id="HDC2863946.1"
                     /translation="MISVNDFKTGLTISVDNAIWKVIDFQHVKPGKGSAFVRSKLRNL
                     RTGAIQEKTFRAGEKVEPAMIENRRMQYLYADGDNHVFMDNESFEQTELSSDYLKEEL
                     NYLKEGMEVQIQTYEGETIGVELPKTVELTVTETEPGIKGDTATGATKSATVETGYTL
                     NVPLFVNEGDVLIINTGDGSYISRG"
     gene            9478..9942
                     /gene="accB"
                     /locus_tag="O7798_001688"
     CDS             9478..9942
                     /gene="accB"
                     /locus_tag="O7798_001688"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500138.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA carboxylase biotin carboxyl carrier
                     protein"
                     /protein_id="HDC2863947.1"
                     /translation="MNFKEIKELIEILDKSTLTEINIEDTKGKVTLKKEKETEIITPQ
                     ISQMPVEAAAMPMPQAQSTDSNKTEAPKPTSDNHKTINAPMVGTFYKSPSPDEEAYVQ
                     VGDTVSNETTVCILEAMKLFNEIQAEISGEIVEILVEDGQMVEYGQPLFKVK"
     gene            9942..11297
                     /gene="accC"
                     /locus_tag="O7798_001689"
     CDS             9942..11297
                     /gene="accC"
                     /locus_tag="O7798_001689"
                     /EC_number="6.3.4.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500137.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA carboxylase biotin carboxylase
                     subunit"
                     /protein_id="HDC2863948.1"
                     /translation="MKKVLIANRGEIAVRIIRACRDLGIQTVAIYSEGDKDALHTQIA
                     DEAYCVGPTLSKDSYLNIPNILSIATSTGCDGVHPGYGFLAENADFAELCEACQLKFI
                     GPSYQSIQKMGIKDVAKAEMIKANVPVVPGSDGLMKDVSEAKKIAKKIGYPVIIKATA
                     GGGGKGIRVARDEKELETGFRMTEQEAQTAFGNGGLYMEKFIENFRHIEIQIVGDSYG
                     NVIHLGERDCTIQRRMQKLVEEAPSPILDDETRREMGNAAVRAAKAVNYENAGTIEFI
                     YDLNDNKFYFMEMNTRIQVEHPVTEMVTGIDLVKLQLQVAMGDVLPYKQEDIKLTGHA
                     IEFRINAENPYKNFMPSPGKIEQYLAPGGYGVRIESACYTNYTIPPYYDSMVAKLIIH
                     EPTRDEAIMAGIRALSEFVVLGIDTTIPFHIKLLNNDIFRSGKFNTNFLEQNSIMNDE
                     G"
     gene            11312..11674
                     /locus_tag="O7798_001690"
     CDS             11312..11674
                     /locus_tag="O7798_001690"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500136.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Asp23/Gls24 family envelope stress response
                     protein"
                     /protein_id="HDC2863949.1"
                     /translation="MVKVTDYSNSKLGKVEIAPEVLSVIASIATSEVEGITGHFAELK
                     ETNLEKVSRKNLSRDLKIESKEDGIYIDVYCALKHGVNISKTANKIQTSIFNSISNMT
                     AIEPKQINIHITQIVIEK"
     gene            11734..12123
                     /gene="nusB"
                     /locus_tag="O7798_001691"
     CDS             11734..12123
                     /gene="nusB"
                     /locus_tag="O7798_001691"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500135.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcription antitermination factor NusB"
                     /protein_id="HDC2863950.1"
                     /translation="MSRKESRVQAFQTLFQLEMKDSDLTINEAISFIKDDNPDLDFEF
                     IHWLVSGVKDHEPVLDETISPYLKDWTIARLLKTDRIILRMATYEILHSDTPAKVVMN
                     EAVELTKQFSDDDHYKFINGVLSNIKK"
BASE COUNT         4407 a         1667 c         2266 g         3870 t
ORIGIN      
        1 agattgtttt gttattgaaa gaagggaaaa cgcatgaatc atgataaatc accaataatt
       61 ttaattggtt tcatgggtac cggtaaatct acgattggta aatacgttgc agatgagcaa
      121 aatttatcat ttattgatat agattcatat atcgaagaga agtataagtt aacaatacca
      181 gaaatatttt gtaaacatgg tgaacaatat ttcaggaatt tagagttcac atgtttgcaa
      241 gaatgtatta acactgcaga tataattgct actggtggtg gtattattga gagtgaagag
      301 gcatttaatt ttttgaaaaa tcaaaaaaac attatttggt tagattgtaa tattgatatt
      361 atatatagtc gaatcaatga tgacccacat cgacctaatg caaataataa gacaatcaag
      421 cagttaaatg acttgtattg ctcgcggaat ttaagatata atgaaatcgc attcaagaaa
      481 tttgatagtc atttgctatc aatttcagaa atatattatg aattgctaaa tttaataaaa
      541 gcgagtgatc agtattagag agaatagagc gttaagactc tatcgccgaa ggtgcaagta
      601 atttattacg aaactctcag gcaaaaggat aatactgtaa cgcgttcctg aattggtgat
      661 ttataaacag ggtagcgatt gctatcctgt ttttataatt ttaagggggt atttcaatgt
      721 caagtgattt aaaacaaaca cctttatatc aaaattatgt tgatagaggt gcaaaaattg
      781 tggaattcgg aggatgggcg atgcctgttc aattttcaag tattaaagag gagcataatg
      841 ctgttcgata cgaaattggc ctgtttgatg ttagtcatat gggtgaaatt gaagtaacag
      901 gtaaagatgc tagtcagttt gtgcaatatt tattatcaaa tgatactgat aatttaacta
      961 cttcaaaagc attatatact gctttatgta atgaagaagg cggtattatt gatgatttag
     1021 taatatataa attagctgac gacaattatt tattagttgt taatgctgct aatactgaaa
     1081 aagattttaa ttggatttta aaacacaaag agaaatttga tgttgaagta caaaatgtat
     1141 caaaccaata tggtcaatta gcaatacaag gaccaaaagc tagagattta attaatcaat
     1201 tagttgatga agatgtaact gaaatgaaaa tgtttgaatt taaacagggt gtcaaattat
     1261 ttggagcaaa cgtcatttta tctcagtcag gttacacagg tgaagatggg tttgaaattt
     1321 attgtaatat cgatgatact gaaaaaattt gggatggttt attagagtat aatgttatgc
     1381 catgtgggtt aggcgctcgt gatacattaa gattagaggc tggattgcca ttacatggac
     1441 aagatttaac tgaatcaatt acaccatatg aaggtggtat cgcttttgca agtaaaccat
     1501 taattgatgc tgattttatt ggtaaatctg tattaaaaga tcaaaaagaa aatggtgcac
     1561 caagaagaac agtgggatta gaattacttg aaaaaggaat tgcaagaact ggttatgaag
     1621 ttatggattt agatggaaat attattggag aagtaacttc aggaacacag tctccatcat
     1681 caggaaaatc aattgcactt gcaatgataa aaagagatga gtttgaaatg ggtagagagt
     1741 tgcttgttca agttcgtaag cgtcaattaa aagcgaaaat tgttaagaaa aatcaaattg
     1801 ataaataatt aaaaaggggt gtgcattgtg agtcatcgtt atataccttt aactgaaaaa
     1861 gacaagcaag aaatgttaca aacaattggt gcaaaatcta taggagaatt attcggtgat
     1921 gtaccaagtg acattttatt aaatagagat ttaaatattg ctgaaggcga agcggaaaca
     1981 acgttactta gaagattaaa tcgcattgca agcaagaata tcactaaaga aatgcataca
     2041 tcatttttgg gtgctggtgt ttatgatcat tacgcgccat cagttgtgga tgctatgatt
     2101 tcaagatcag aattttacac agcatatacg ccatatcaac cggaaatttc tcaaggtgaa
     2161 ttacaagcca tttttgagtt ccaaacttta atttgtgaat taacagatat ggatgtagca
     2221 aattcttcta tgtatgatgg gatgactagc tttgctgaag catgtatctt agcatttagt
     2281 caaacaaaga aaaataaaat tgtagtctca aaaggtttac attatcaagc attacaagta
     2341 cttcatactt atgctaagac gcgtaaggaa ttcgaagtag tggaaatcga tttagatggc
     2401 actgttacag atttgaaaaa attagaagca gcagtggatg atgaaacagc agctgttgca
     2461 gtacaatatc caaactttta cggttcaatt gaagatcttg aaaagattca tagctttatt
     2521 gaagataaaa aagcattatt tatcgtatat gcaaatccat tagcattggg attacttaca
     2581 cctccaggtt catttggtgc agatattgtt gtaggtgata ctcagccatt cggaattcct
     2641 gctcaattcg gtgggccaca ttgtggatat tttgcaacga cgaaaaagtt aatgcgtaaa
     2701 gtgccaggta gattagtcgg tcaaacacaa gatgatgaag gtaatcgtgg ctttgtatta
     2761 acattacaag cacgtgaaca acatattcga cgcgataaag cgacatctaa tatttgttct
     2821 aaccaagcat taaatgcttt agcgtcatca attgcaatgt cagcacttgg taaacaaggt
     2881 atctatgata ttgcagttca aaatatagaa catgctaact atgctaaaca acaatttatt
     2941 aaaaaaggtt ttgaagtatt agatggtaca tctttcaatg agtttgtagt caaatttgac
     3001 aaaccaattc aacaagttaa cgaggaatta gtgaagtaca atattatcgg tggttttgat
     3061 ttaggtgttg tttcagacga ctttaaaaat cacatgttaa tagctgtaac tgaattaaga
     3121 acaaaagatg aaatcgatac atttgtagaa aaggctggtg agttaaatga ctagtaaatc
     3181 aagtccatta atttttgaaa gatctcgtga aggcagatat gcatattcat taccaaaaag
     3241 tgatattaaa acaaattctg ttgagtcatt gttagatgat aaatttattc gtaaaaacaa
     3301 agcggagttt cctgaagttg ctgaactaga cttagtacgt cattatactg aactttcaaa
     3361 taaaaatttc ggtgtagaca acggatttta tccattgggt tcatgtacga tgaagtataa
     3421 ccctaaaatt aatgaaaagg ttgctagaat accaggattt agtgaatcac atccattaca
     3481 agatgaagat caagttcaag gttcattaga aattatttat agtttgcaag aagaattaaa
     3541 agaaattact ggtatggatg aggtgacatt acaaccagct gctggcgcac atggtgaatg
     3601 gactgcattg atgatattta aagcttacca tgagaataat ggtgaaggtc atcgtgatga
     3661 agtcattgtg ccagattctg cgcatggtac gaatccagcc tcagcttcat ttgcaggatt
     3721 taaatcagtt actgtaaaat caaacgaacg tggcgaagtt gatattgatg acttgaaacg
     3781 tgttgtaaat gaaaatacag cagctattat gttaactaat ccaaacactt taggtatttt
     3841 cgaaaaaaat attatggaaa tccgtgaaat cgtccataat gctggtggtc tattatatta
     3901 tgatggtgcg aatttaaacg ctattatgga caaagttcgc ccaggagata tgggatttga
     3961 tgctgttcat ttaaacttgc ataaaacatt tactggtcca catggtggtg gcggtcctgg
     4021 ttcaggtcca gtcggtgtag taaaagaact agcaagttac ttaccaaagc caatggttat
     4081 taaagatggc gacaaattta aatatgataa tgacattaaa aattctatcg gacgtgtaaa
     4141 accattttat ggtaactttg gtatttactt aagagcttat acgtatattc gaactatggg
     4201 agcaactgga cttaaagagg tttctgaagc agcggttctt aatgcgaatt atattaaagc
     4261 acgtttatct aaacactttg aaatacctta taaacaatat tgtaaacacg agtttgtgtt
     4321 aagtggtgtg cgtcaaaaag aatttggtgt acgtacttta gacatggcta agcgattatt
     4381 agatttcggt gtacatccac caacaatata cttcccatta aatgttgaag aaggtatgat
     4441 gattgaaccg actgagacag agtctaaaga aacacttgat tattttatcg atacattaat
     4501 tagtattgct gaagaagcta aaaatgatcc tgataaagtg ctagaagcac cacatacaac
     4561 tgtgattgat cgattagacg aagctacagc tgctcgtaaa ccaatattaa agtttgaaaa
     4621 tcttaaacag gaaaaataaa gtattaaaca catattccga gaattattat tctaactttg
     4681 tatgaagatt taaggataat ggtttcaaaa tcaattgaaa aagacaattt ctatttaaac
     4741 aagaaaacta aaccgaagta ataactctta gggtttggta ttattctttc atagaaattg
     4801 tcttttcatt ttttagattg cggtaattga atcgtattga aaatgagctg aactttcttt
     4861 attatgctga aactaagttt aatgatcagt gaagctagag aaatatagta acagactttg
     4921 ttaaaaaatt aaaatctgag tattgttatt gatgatcaat taacactcag attttattaa
     4981 atcgtatatt aaatttacaa aaactatttt ttagacttta tttttccagt ccatttttta
     5041 tagccgcctt ttaacatata gatatctgta tatccattct ttttcaaaat acgagcggct
     5101 ctatagctag caatcccatt ggcatcacat aagtataccg gttgatcttt tcttaatcct
     5161 tggaatcgtt gcctgaacat tgtcatagga atattgcgag acccattaat gtgaccgtag
     5221 tcatagtcaa ctttctctct aacatcgatg acttgagctt ttctaatccc attatggaat
     5281 tcattttgat ctaattcttt aacagctcgc ttgttaagaa tttgttgaac aatcatataa
     5341 gcaataattg ctataactaa aattattgcg atgtacaaac tagcactcat cttgcatcct
     5401 ccctaattaa acgataatat aattataaga ctgttaggtc aaattatcaa aatatttcac
     5461 taaagaattg caattattat tcatttagtt aaattgatta attagcgaat caaatattat
     5521 acattttgct gataggagtt cttgaatatg actgaaactt ggaattttat taatacagga
     5581 agtaaagacc catattataa tatggcaatg gatgaagcgt tattaaattt tgtctctaga
     5641 ggtgaaattg atccagttat acgtttttac acatggaatc ctgcaacatt atcaataggg
     5701 tatttccaaa ggctacaaaa agaaattgat attgataagg ttaaagagaa aggttttggt
     5761 ctcgtaaggc gtcaaactgg tggccgtggg gtgctacatg ataaagagtt aacttacagt
     5821 gtgattgtgc ctgaatcgca tccgaatatg ccttctacag ttacagaagc gtacagagtg
     5881 atttcacaag gattattaga aggatttaaa aacttaggat ttgatactta ttttgcggta
     5941 cctaaaacgc ctgaagagcg tcaaaaatta aaacaacctc gaagttcagt gtgttttgat
     6001 gcaccaagtt ggtatgagct agttgttgaa ggccgtaaga ttgctgggag tgctcaaacg
     6061 agacaaaagg gcgtaatcct ccaacacggt tcgattttac aagatattga tattgatgaa
     6121 ctgtttgata tgtttattta taaaaatgaa agattaaaat taaaaatgaa agaggcattc
     6181 gttgaaaaag cagttgccat caatgatatt tcagatgaac acattactat tagtcaaatg
     6241 gaagaagctt tcgagaaagg ttttaagaaa ggtttaaata tagaattaaa gccacttgaa
     6301 ttaacagaag ctcaattggc agaagtggaa gaattaactg aaaaatatcg ttcagatgaa
     6361 tggatgttta gaaagtagtt tttagaataa aaaatggaag cacgtagact attttaccta
     6421 caagtgcttc cgttttttta tctattttct tctttgattt cttttatact tacgcattgc
     6481 tttgcgatat ttgcgttggt cttcagttaa gatgaagaaa taataaatca gataaataat
     6541 accagctatt acagcaaagc tgattaacat tctgacgatt gaaaaaataa aggcatctag
     6601 attcattact aatccaatcg cagcaataat aagtacaaga taaaatatta tattacgcat
     6661 taaaagactc ctatcatgat tttgcattta agtttaattt tgacaacgct tgttgtcctt
     6721 ttgtaagttg ttttttatct ttattttgat agccattttt aatatcatca aatgcatgat
     6781 tcaaatcaga gtttaattta tcgatatttt tagacgtttt tttatcatca tcactaagtg
     6841 ataaaccatc gatagcatct ttgtatgaag tgtgagcact ttgaatatca ttagaaattt
     6901 gatttaattt cgattgaaca ttcttatcgc ctttgttttt acttacatct ttctcaatat
     6961 cgttatagga tttcaaagct ttagcaactt tgtcgtagta tgttgatgta acattcatca
     7021 atttaatttt cgtattatta gatgcagttt ttttactgtt ttctttatcc ttttcaagcc
     7081 ctttaatttt agatttagaa tcactaattt gttgattaag ttcttgaata tctagtttga
     7141 gttgatgatt atcttctctt aaatctgttg ttttttcttc taatggtgct aaattttgtg
     7201 atccacatcc agctaacaat aatgttgcgc caacaattga aaccaatttt ttcattacta
     7261 tctccctaaa atcaatatct attatttttt atccttatta tgatattatt ttaatgtata
     7321 aagttgaaat gcacaaacgt ttcactagga ggtaataaga tgagcagaat aacacaagtg
     7381 catcgtattt tagaacaaaa acatttagat gcgattatca ttctttcgga ttacaataga
     7441 agatatttat caggttttac tggtaccagt ggagcactta tcatatctaa agataaacaa
     7501 tatttgataa cagactttag atatattgat caagcaacta agcaggcgcc aaattatgaa
     7561 attattaatc gtaaatctac tattattggt gagattaaag aattgctaca ccaagaaaat
     7621 tttgaaaatg taggttttga ggggcatcat gtaagttatg atacatacct tgaattaaat
     7681 aaaagccgta tatcattaat aagcatttct aatactgtag ataaaattag agacgtcaaa
     7741 gatgctgacg aaattgcttt aattcaaaaa gcagctaata ttgttgatga aacatatgaa
     7801 tatattttaa ctgttgtaaa agcaggcatg actgaaaaag aattaaaggc aatattagaa
     7861 agcaaaatgc tagaattagg agcagatgga ccatcattcg atacgattgt agcatctggt
     7921 catagaggtg cattaccaca tggtgttgca agtgataaaa ttattgaaaa aggcgacatg
     7981 attacattag attttggcgc gtattataac ggctattgtt cagatattac tagaacattt
     8041 gctattggag aaccagatcc taaactgaaa gaaatatatc aaatagtact tgaatctcaa
     8101 atgaaagcaa ttaatgagat tagacctggc atgactggtg cagaagctga tgccatttca
     8161 agaaactatt tagagtcaaa agggtatgga aaagaatttg gacattcact aggacatggt
     8221 attggtttag aaatccatga agggccaatg ctggctcgta cgatacaaga taaacttcaa
     8281 gttaacaact gtgttacagt agaacctggt gtttatatag aaggtttggg cggtataaga
     8341 atagaagatg atattttaat tacagaaaat ggttgtcaag tctttactaa atgcacaaaa
     8401 gaccttatag ttttaacata agcgtgtaaa atgaggagga aactgaatga tttcggttaa
     8461 tgattttaaa acaggtttaa caatttctgt tgataacgct atttggaaag ttatagactt
     8521 ccaacatgta aagcctggta aaggttcagc attcgttcgt tcaaaattac gtaatttaag
     8581 aactggtgca attcaagaga aaacgtttag agctggtgaa aaagttgaac cagcaatgat
     8641 tgaaaatcgt cgcatgcaat atttatatgc tgacggagat aatcatgtat ttatggataa
     8701 tgaaagcttt gaacaaacag aactttcaag tgattactta aaagaagaat tgaattactt
     8761 aaaagaaggt atggaagtac aaattcaaac atacgaaggt gaaactatcg gtgttgaatt
     8821 acctaaaact gttgaattaa cagtaactga aacagaacct ggtattaaag gtgatactgc
     8881 aactggtgcc actaaatcgg caactgttga aactggttat acattaaatg tacctttatt
     8941 tgtaaacgaa ggtgacgttt taattatcaa cactggtgat ggaagctaca tttcaagagg
     9001 ataatctcta atttgttaac aaatagcttg tattcactat actgatttaa cgtaagatat
     9061 tctaaataag tctcataaag ctattgccta aaatgattat aggttatatg ctgatatgag
     9121 gctttttatt tttaaaataa tttttaaaat ataaaacgaa tcgtctaatt ggtagtgaaa
     9181 aaacatagac atgagtaaag gtatatatct acatatcata ttgttgagga taaaacataa
     9241 tagctaataa aaataacatt gatatgttta actgaatgca taaaattttt aatcaagagt
     9301 taagatgagt caatgttaag taataaatac acaagtgttt ttaatttaaa atgtggtttt
     9361 attataactt tgggatagac ttataatgtc gccagcaata tgaacatgct tgaattgaag
     9421 agttgtctca agtaaaatag acgggtagat gaaaacaaac tgaaggagtc agtaataatg
     9481 aactttaaag aaatcaaaga attaattgaa attctggata aatcaacttt aacggaaatc
     9541 aatattgaag atactaaagg caaagtgacg cttaagaaag aaaaagaaac tgagattatc
     9601 acgccacaaa tctcacaaat gccagttgaa gctgcggcaa tgcctatgcc tcaagcacaa
     9661 tcaactgata gcaataaaac tgaagctcca aagccaactt cagataatca caaaacaatt
     9721 aatgcaccta tggtaggtac attttacaaa tcgccatctc cagacgaaga agcatatgtg
     9781 caagttgggg acactgtttc aaatgaaaca acagtgtgta ttttagaggc aatgaaacta
     9841 tttaatgaaa ttcaagcaga aatttcaggt gaaattgttg aaatcttagt agaagacgga
     9901 caaatggtag agtatggcca accgttattt aaggtgaaat aatgaaaaag gttttaattg
     9961 caaaccgcgg tgaaatcgca gttaggatta ttcgcgcttg tcgtgattta ggcatccaaa
    10021 ctgttgcaat ctattctgaa ggggataaag atgcgctaca tactcaaatt gctgatgaag
    10081 catattgcgt aggtcccact ttgtctaaag attcatattt aaatattccg aacatcttat
    10141 ctattgcaac ttctacaggt tgtgatggcg ttcatccggg ttatggcttt ttagctgaaa
    10201 atgctgattt tgcagaatta tgcgaagcat gccaattgaa gttcattgga ccaagttatc
    10261 aatctatcca aaaaatgggt atcaaagatg ttgctaaggc agaaatgatc aaagccaatg
    10321 ttccagttgt tcctggtagt gacggtttaa tgaaagacgt ctcagaagct aagaaaatcg
    10381 ccaaaaaaat tggctatccg gtcatcatta aagctactgc tggcggtggc ggaaaaggta
    10441 tccgtgttgc tcgtgatgaa aaagaacttg aaactggctt ccgaatgaca gaacaagaag
    10501 ctcaaactgc atttggtaat ggtggacttt atatggagaa attcatcgaa aacttccgcc
    10561 atattgaaat ccaaattgtt ggggacagct atggtaatgt aattcattta ggagaacgtg
    10621 attgtacaat tcaaagacgt atgcagaaat tagtggaaga agcaccttcc ccaattttag
    10681 atgatgaaac acgtcgtgaa atgggaaatg ccgcagttcg tgcagcgaaa gctgtaaatt
    10741 atgaaaatgc gggaacaatt gagtttatat atgatttaaa tgataataaa ttttatttta
    10801 tggaaatgaa tacacgtatt caagtagaac atcctgtaac tgaaatggta acaggaattg
    10861 atttagttaa attacaatta caagttgcta tgggtgacgt gttaccgtat aaacaagaag
    10921 atattaaatt aacaggacac gcaattgaat ttagaattaa tgctgaaaat ccttacaaga
    10981 actttatgcc atcaccaggt aaaattgagc aatatcttgc accaggtgga tatggtgttc
    11041 gaatagagtc agcatgttat actaattata cgataccgcc atattatgat tcgatggtag
    11101 cgaaattaat catacatgaa ccgacacgag atgaagcgat tatggctggc attcgtgcac
    11161 taagtgaatt tgtggttctt ggtattgata caactattcc attccatatt aaattattga
    11221 ataacgatat atttagaagc ggtaaattta atacaaactt tttagagcaa aatagcatta
    11281 tgaatgatga aggttaatag gaggtcaatc catggtcaaa gtaactgatt attcaaattc
    11341 aaaattaggt aaagtagaaa tagcgccaga agtgctatct gttattgcaa gtatagctac
    11401 ttcggaagtc gaaggcatca ctggccattt tgctgaatta aaagaaacaa atttagaaaa
    11461 agttagtcgt aaaaatttaa gccgtgattt aaaaatcgag agtaaagaag atggcatata
    11521 tatagatgta tattgtgcat taaaacatgg tgttaatatt tcaaaaactg caaacaaaat
    11581 tcaaacgtca atttttaatt caatttctaa tatgacagcg atagaaccta agcaaattaa
    11641 tattcacatt acacaaatcg ttattgaaaa gtaatgtcat acctaattca gtaattaaat
    11701 aaagaaaaat acaaacgttt gaaggagtta aaaatgagtc gtaaagaatc ccgagtgcaa
    11761 gcttttcaaa ctttatttca attagaaatg aaggacagtg atttaacgat aaatgaagcg
    11821 ataagcttta ttaaagacga taatccagat ttagacttcg aatttattca ttggctagtt
    11881 tctggcgtta aagatcacga acctgtatta gacgagacaa ttagtcctta tttaaaagat
    11941 tggactattg cacgtttatt aaaaacggat cgtattattt taagaatggc aacatatgaa
    12001 atattacaca gtgatacacc tgctaaagtc gtaatgaatg aagcagttga attaacaaaa
    12061 caattcagtg atgatgatca ttataaattt ataaatggtg tattgagtaa tataaaaaaa
    12121 taaaattgag tgatgttata tgtcagatta tttaagtgtt tcagctttaa cgaaatatat
    12181 taaatataaa tttgatcaag atccacatct
//
LOCUS       DALPQQ010000073        12073 bp    DNA     linear   BCT 22-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus strain K18-6-464
            SAMD00233528-rid16434743.denovo.073, whole genome shotgun sequence.
ACCESSION   DALPQQ010000073 DALPQQ010000000
VERSION     DALPQQ010000073.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMD00233528
            Sequence Read Archive: DRR236061
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 12073)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 12073)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001543423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001543423.1
            Genome Coverage       :: 77x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/22/2022 17:09:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,811
            CDSs (total)                      :: 2,743
            Genes (coding)                    :: 2,689
            CDSs (with protein)               :: 2,689
            Genes (RNA)                       :: 68
            rRNAs                             :: 2, 4, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 4, 2 (16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 54
            CDSs (without protein)            :: 54
            Pseudo Genes (ambiguous residues) :: 0 of 54
            Pseudo Genes (frameshifted)       :: 27 of 54
            Pseudo Genes (incomplete)         :: 27 of 54
            Pseudo Genes (internal stop)      :: 10 of 54
            Pseudo Genes (multiple problems)  :: 10 of 54
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..12073
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMD00233528-rid16434743.denovo.073"
                     /strain="K18-6-464"
                     /db_xref="taxon:1280"
                     /geo_loc_name="Japan: Niigata"
     gene            complement(212..1114)
                     /gene="cvfB"
                     /locus_tag="O7798_001692"
     CDS             complement(212..1114)
                     /gene="cvfB"
                     /locus_tag="O7798_001692"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499919.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA-binding virulence regulatory protein CvfB"
                     /protein_id="HDC2863951.1"
                     /translation="MALDKDIVGSIEFLEVVGLQGSTYLLKGPNGENVKLNQSEMNDD
                     DELEVGEEYSFFIYPNRSGELFATQNMPDITKDKYDFAKVLKTDRDGARIDVGLPREV
                     LVPWEDLPKVKSLWPQPGDYLLVTLRIDRENHMYGRLASESVVENMFTPVHDDNLKNE
                     VIEAKPYRVLRIGSFLLSESGYKIFVHESERKAEPRLGESVQVRIIGHNDKGELNGSF
                     LPLAHERLDDDGQVIFDLLVEYDGELPFWDKSSPEAIKEVFNMSKGSFKRAIGHLYKQ
                     KIINIETGKIALTKKGWSRMDSKE"
     gene            1261..2862
                     /locus_tag="O7798_001693"
     CDS             1261..2862
                     /locus_tag="O7798_001693"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499920.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HDC2863952.1"
                     /translation="MLQVTDVSLRFGDRKLFEDVNIKFTEGNCYGLIGANGAGKSTFL
                     KILSGELDSQTGHVSLGKNERLAVLKQDHYAYEDERVLDVVIKGHERLYEVMKEKDEI
                     YMKPDFSDEDGIRAAELEGEFAEMNGWNAEADAANLLSGLGIDPTLHDKKMAELENNQ
                     KIKVLLAQSLFGEPDVLLLDEPTNGLDIPAISWLEDFLINFDNTVIVVSHDRHFLNNV
                     CTHIADLDFGKIKVYVGNYDFWYQSSQLAQKMAQEQNKKKEEKMKELQDFIARFSANA
                     SKSKQATSRKKQLEKIELDDIQPSSRRYPFVKFTPEREIGNDLLIVQNLSKTIDGEKV
                     LDNISFTMNPNDKAILIGDSEIAKTTLLKILAGEMEPDEGSYKWGVTTSLSYFPKDNS
                     EFFEGVNMNLVDWLRQYAPEDEQTETFLRGFLGRMLFSGEEVKKKASVLSGGEKVRCM
                     LSKMMLSSANVLLLDEPTNHLDLESITAVNDGLKSFKGSIIFTSYDFEFINTIANRVI
                     DLNKQGGVSKEIPYEEYLQEIGVLK"
     gene            3721..4926
                     /locus_tag="O7798_001694"
     CDS             3721..4926
                     /locus_tag="O7798_001694"
                     /EC_number="2.7.2.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499921.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate kinase"
                     /protein_id="HDC2863953.1"
                     /translation="MVTRSVLKFGGSSVSDFTKIKRIAEMLKERVNQDEQLIVVVSAM
                     GNTTDQLMTNVSTLTKAPKQQELALLLTTGEQQTVSYLSMVLNDIGMNAKAMTGYQAG
                     IKTIGHHLKSKIAQINPQTFEQAFQENDILVVAGFQGINEHQELTTLGRGGSDTTAVA
                     LAVSNQIPCEIYTDVDGVYATDPRLLPKAKRLDIVSYEEMMEMSALGAGVLETRSVEL
                     AKNYNIPLYLGKTLSNVKGTWIMSNEEILEKKAVTGVALDKHMMHVTISYPLPDNQLL
                     TQLFTELEEGAVNVDMISQIVNLDGLQLSFTIKDSDFHQISMILETLKNQYEALAYKI
                     NEHYVKISLIGSGMRDMSGVASKAFLTLIENNIPFYQTTTSEISISYVIDDFNGQQAV
                     EKLYDAFNI"
     gene            4990..5979
                     /locus_tag="O7798_001695"
     CDS             4990..5979
                     /locus_tag="O7798_001695"
                     /EC_number="1.2.1.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499922.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate-semialdehyde dehydrogenase"
                     /protein_id="HDC2863954.1"
                     /translation="MKKLAVVGATGLVGTKMLETLNRKNIPFDELVLFSSARSAGQEV
                     EFQGKTYTVQELTDARASEHFDYVLMSAGGGTSEHFAPLFEKAGAIVIDNSSQWRMAE
                     DIDLIVPEVNEPTFTRGIIANPNCSTIQSVVPLKVLQDAYGLKRVAYTTYQAVSGSGM
                     KGKKDLAEGVNGKAPEAYPHPIYNNVLPHIDVFLENGYTKEEQKMIDETRKILNAPDL
                     KVTATCARVPVQDSHSVEIDVTLDKETTAEDIKALFDQDDRVVLVDNPENNEYPMAIN
                     STNKDEVFVGRIRRDDSLENTFHVWCTSDNLLKGAALNAVQVLEQVMRLKGAN"
     gene            5981..6868
                     /locus_tag="O7798_001696"
     CDS             5981..6868
                     /locus_tag="O7798_001696"
                     /EC_number="4.3.3.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499923.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxy-tetrahydrodipicolinate synthase"
                     /protein_id="HDC2863955.1"
                     /translation="MTHLFEGVGVALTTPFTNNKVNIEALKTHVNFLLENNAQAIIVN
                     GTTAESPTLTTDEKERILKTVIDLVDKRVPVIAGTGTNDTEKSIQASIQAKALGADAI
                     MLITPYYNKTNQRGLVKHFEAIADAVKLPVVLYNVPSRTNMTIEPETVEILSQHPYIV
                     ALKDATNDFEYLEEVKKRIDTNSFALYSGNDDNVVEYYQRGGQGVISVIANVIPKEFQ
                     ALYDAQQSGLDIQDQFKPIGTLLSALSVDINPIPIKALTSYLGFGNYELRLPLVSLED
                     TDTKVLRETYDTFKAGENE"
     gene            6865..7587
                     /locus_tag="O7798_001697"
     CDS             6865..7587
                     /locus_tag="O7798_001697"
                     /EC_number="1.17.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000698231.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxy-tetrahydrodipicolinate reductase"
                     /protein_id="HDC2863956.1"
                     /translation="MKILLIGYGAMNQRVARLAEEKGHEIVGVIENTPKATTPYQQYQ
                     HIADVKGADVAIDFSNPNLLFPLLDEDFHLPLVVATTGEKEKLLNKLDELSQNMPVFF
                     SANMSYGVHALTKILAAAVPLLDDFDIELTEAHHNKKVDAPSGTLEKLYDVIVSLKEN
                     VTPVYDRHELNEKRQPQDIGIHSIRGGTIVGEHEVLFAGTDETIQITHRAQSKDIFAN
                     GAIQAAERLVNKPNGFYTFDNL"
     gene            7614..8333
                     /gene="dapD"
                     /locus_tag="O7798_001698"
     CDS             7614..8333
                     /gene="dapD"
                     /locus_tag="O7798_001698"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499925.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2,3,4,5-tetrahydropyridine-2,6-dicarboxylate
                     N-acetyltransferase"
                     /protein_id="HDC2863957.1"
                     /translation="MVQHLTAEEIIQYISDAKKSTPIKVYLNGNFEGITYPESFKVFG
                     SEQSKVIFCEADDWKPFYEAYGSQFEDIEIEMDRRNSAIPLKDLTNTNARIEPGAFIR
                     EQAIIEDGAVVMMGATINIGAVVGEGTMIDMNATLGGRATTGKNVHVGAGAVLAGVIE
                     PPSASPVIIEDDVLIGANAVILEGVRVGKGAIVAAGAIVTQDVPAGAVVAGTPAKVIK
                     QASEVQDTKKEIVAALRKLND"
     gene            8476..9627
                     /locus_tag="O7798_001699"
     CDS             8476..9627
                     /locus_tag="O7798_001699"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499926.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase"
                     /protein_id="HDC2863958.1"
                     /translation="MNELEFVTKHRRHLHQHPELSLHEFETTAYIKAFLDSLNIKYDC
                     PLETGVIAYLEGNGSHTIAYRADIDALPILEENDVPYRSQSDHVMHACGHDGHTTALM
                     LFVQRCKDMQDAGQLPQNVVFIFQPAEETGGGANRLIKAGAFDKYPIEAVFGIHVNPF
                     ADEGIAVIRDEEITASATEYRFFLTGLSSHVADKEQGHSCGEALQHVLTQISQIQQFH
                     LNGLKRNIVHIGHFKAGEAINTVPSNGYLEGTIRTYDIDDLTIVKNQMHKIAESVKLL
                     FNVDCEVKFAEGYPPTINSPKLRTQIEDALIKADLNVYDKPTPFLFGEDFSFYGQQLA
                     PAYFVFIGTRNEDKGFVTGLHTSHLNFDEKVLINVVNFYENLLNNYKEV"
     gene            9632..10717
                     /locus_tag="O7798_001700"
     CDS             9632..10717
                     /locus_tag="O7798_001700"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499927.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alanine racemase"
                     /protein_id="HDC2863959.1"
                     /translation="MTATWSVNKKIFLQNAITVKNNQPLMAVVKNNAYHYDLEFAVTQ
                     FIHAGIDTFSTTSLREAIQIRQLAPDATIFLMNAVYEFDLVREHQIHMTLPSLTYYYN
                     HKNDLAGIHVHLEFENLLHRSGFKDLNEIKEVLKDHHHNQNAKMIISGLWTHFGYADE
                     FDVSDYNVERSQWMEIVEALLSEGYQFDLIHAQNSASFYREGQILLPHHTHARVGIAL
                     YGSRPYSSLNQHDIVQSLTLKAHVIQVREVQAGDYCGYSFAFEVTKNNTKLAVVDIGY
                     GDGILRTRAKHEALINGKRYPIRALMMSHMFVEVDGNVHAQDEVILYNNDIRIDEYTF
                     KGVGANSEQLSAMNHDSLKKEYISNDC"
     gene            10707..11972
                     /gene="lysA"
                     /locus_tag="O7798_001701"
     CDS             10707..11972
                     /gene="lysA"
                     /locus_tag="O7798_001701"
                     /EC_number="4.1.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499928.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="diaminopimelate decarboxylase"
                     /protein_id="HDC2863960.1"
                     /translation="MTVKYNQNGELTMDGISLKTIAQSFGTPTIVYDELQIREQMRRY
                     HRAFKDSGLKYNISYASKAFTCIQMVKLVAEEDLQLDVVSEGELYTALEAGFEPSRIH
                     FHGNNKTKHEIRYALENNIGYFVIDSLEEIELIDRYANDTVQVVLRVNPGVEAHTHEF
                     IQTGQEDSKFGLSIQYGLAKKAIDKVQQSKHLKLKGVHCHIGSQIEGTEAFIETAKIV
                     LRWLKEQGIQVELLNLGGGFGIKYVEGDESFPIESGIKDITDAIKSEIKVLGIDAPEI
                     GIEPGRSIVGEAGVTLYEVGTIKEIPEINKYVSIDGGMSDHIRTALYDAKYQALLVNR
                     NEEADDSVTIAGKLCESGDIIIKDAKLPSSVKRGDYLAILSTGAYHYSMASNYNQMQK
                     PSVFFLKDGKAREVIKRQSLRQLIINDTK"
BASE COUNT         4202 a         1901 c         2224 g         3746 t
ORIGIN      
        1 acattataaa atacatatca aaaaagctga tttccatcaa ataattaata gaaatcagct
       61 tttttacatt gcctaagaac ttaatgtccc agcctattcg tttgaattat ttaatttttt
      121 actttgaaag gaatgtttaa aaaactactt catctgtccg atttaatatt gaataaaaaa
      181 aacacgcatc ctacgacacg tgtaaaaatg attattcttt tgagtccatt cgactccaac
      241 cttttttagt taaagcgatt ttacctgttt ctatattaat aatcttctgt ttatataagt
      301 gaccgattgc acgtttgaat gaacctttac tcatattgaa tacttcttta atcgcttcag
      361 ggcttgattt gtcccagaat ggtaattcac catcatattc aactagtaaa tcaaagatga
      421 cttggccgtc atcgtctaaa cgttcatgtg caagtggtaa aaatgaacca tttaactcac
      481 ctttatcatt atgcccgata attctaactt gaacagattc acctaatctt ggttcagctt
      541 tacgttctga ttcatgtacg aaaattttgt aacctgattc gcttaataaa aagctaccaa
      601 ttcgtaatac gcggtaaggt ttggcttcaa tgacttcgtt ttttaaatta tcgtcgtgta
      661 caggtgtaaa catattttct acaacagatt cactcgctaa acgtccatac atatgattct
      721 cacggtcaat tcgtaatgta actagcaaat aatcaccagg ttgtggccat agtgatttca
      781 cttttggtaa atcttcccat ggtactaaca cttcacgggg taatccaaca tctatacgtg
      841 ccccatcgcg atccgtttta agtactttag caaagtcata tttatctttc gtaatatcag
      901 gcatattttg agttgcaaat aattcacctg aacggtttgg ataaatgaag aaactatatt
      961 cttcacctac ttctaattca tcatcatcgt tcatttctga ttggtttaac tttacgtttt
     1021 caccgtttgg tccttttaaa aggtaagttg aaccttgtaa ccctactact tcaaggaatt
     1081 ctatagaacc tactatatct ttgtctaatg ccatgttatt ctccttcgat tcttgtattc
     1141 tttattatta taacatgtgt gagtcattct atcattacaa cttatatgag gtcgaaactg
     1201 tgacgataat atgatataat tcttccgtta gaatatcgaa tgaaaaaaag gagaaaatgc
     1261 atgttacaag taactgatgt gagtttacgt tttggagatc gtaaactatt tgaagatgta
     1321 aatattaaat ttacagaagg taattgttat ggattaattg gtgcgaatgg tgcaggtaaa
     1381 tcaacattct taaaaatatt atctggtgaa ttagattctc aaacaggaca tgtttcatta
     1441 gggaaaaatg aacgtctagc tgttttaaaa caggaccact atgcttatga agatgaacgc
     1501 gtgcttgatg ttgtaattaa aggtcacgaa cgtctttatg aggttatgaa agaaaaagat
     1561 gaaatctata tgaagccaga tttcagtgat gaagatggta tccgtgctgc tgaacttgaa
     1621 ggtgaatttg cagaaatgaa tggttggaat gctgaagctg atgctgctaa ccttttatct
     1681 ggtttaggta tcgatccaac tttacacgat aaaaaaatgg ctgaattaga aaacaaccaa
     1741 aaaattaaag tattattagc gcaaagttta ttcggtgaac cagacgtact attactggat
     1801 gagcctacta acggtctcga tattccagca atcagttggt tagaagattt cttaattaac
     1861 tttgataata ctgttatcgt agtatcgcat gaccgtcatt tcttaaataa tgtatgtact
     1921 catatcgctg atttagactt cggtaaaatt aaagtttatg ttggtaacta tgatttttgg
     1981 tatcaatcta gtcagttagc tcaaaagatg gctcaagaac aaaacaagaa aaaagaagaa
     2041 aaaatgaaag agttacagga ttttattgct cgtttctcag ctaacgcttc taaatctaaa
     2101 caagcaacaa gtcgtaaaaa acaactcgag aaaattgaat tagatgatat tcaaccatca
     2161 tcaagaagat atcctttcgt taaattcaca cctgagcgcg aaatcggtaa tgacttacta
     2221 atcgttcaaa atctatctaa aacgattgac ggtgaaaaag tattagataa tatttcattc
     2281 acaatgaatc caaatgataa agcaatttta attggggata gtgaaattgc gaaaaccaca
     2341 ttgcttaaaa tattagccgg tgaaatggaa ccagacgaag gttcatataa atggggtgta
     2401 acaacgtcat taagttactt ccctaaagat aactcagaat tctttgaggg cgttaatatg
     2461 aaccttgtag attggttaag acaatacgca ccagaagatg agcaaactga aacattttta
     2521 cgcggcttct taggccgtat gctatttagt ggagaagaag ttaagaaaaa agctagtgta
     2581 ctttcaggtg gagaaaaagt acgttgtatg ctaagtaaaa tgatgttatc aagtgcaaac
     2641 gttcttttac ttgatgaacc aacaaaccac ttagacttag aaagtattac tgctgttaat
     2701 gatggactta aatcattcaa aggttctatt atctttactt catatgactt tgaatttatc
     2761 aatacaatcg caaaccgtgt tatcgattta aataaacaag gtggcgtttc aaaagaaatt
     2821 ccatatgaag aatatttaca agaaatcggc gttttaaaat aaacataata tgtagaattt
     2881 cttttcgaaa atctctgtat tgaggcccga ccaacttgca cattattgta agttggctta
     2941 ctgtcacctt ctatattggg cttattccgc aacttgtatt gtttgtagaa attaggaatc
     3001 caatttctct atgtgttgca ccgacaagga ttgaaaaaag ctagctacaa agtcattttc
     3061 attcagtcaa ctactgtcaa tataacattg cagggcctag ggcattgatt catgtccgag
     3121 actatattca atttaataga cattaactgg gcgtctcgat gctaatattt atagcatcga
     3181 ggtgtccttt ttattttatt ttttaacaca tcagcatagt gaacacccct tctctaaatt
     3241 acaaatacag ttatcaacgc attaaaagag tacatttatt taatgtgcat attgattatg
     3301 ctataagtat tttgaatttt atttttcaaa aagtctcatt atcaccacct tttaaaatat
     3361 aagcaacgct ataacttgaa ttttcaggtt attccaaaaa atctaaatta tcggtttaca
     3421 ttcatatttg tcatatgtat aatgaacaca taccaattta ataatatttt gatgaggcgc
     3481 atcaatcatg agtaaagttt agattactgt ctgctaacag ctaaatttga aagggtgcga
     3541 tgccgaagca attataatag cagttataat ttgttggact ttttggttaa gagctgagag
     3601 tttgtcatta tttaaaaata atggagtgca tcacttgtat atagattaag agcaagttcg
     3661 cattccgaac ttgttctttt tttattattg tgtgcccttc ctaacaatta ggaggattat
     3721 atggtaacaa gaagtgtgtt gaaatttggc ggatcatccg tcagtgattt tacaaaaata
     3781 aaaaggatcg ctgaaatgtt aaaggagcga gtcaatcaag atgaacaatt aattgtcgtt
     3841 gtaagtgcta tgggtaacac aacagatcaa ttaatgacga atgtatcaac cttgactaaa
     3901 gcaccaaaac aacaagaact ggcattatta ttgacaaccg gagagcaaca aactgtatct
     3961 tatttatcaa tggtattaaa tgatatcggt atgaatgcca aagcaatgac tggctatcaa
     4021 gcgggtatta aaaccattgg ccatcattta aaaagtaaaa ttgctcaaat taatcctcaa
     4081 acatttgaac aagcctttca agaaaacgat attttagtag ttgctggatt tcaaggcatc
     4141 aatgaacatc aggaattaac aactttaggc agaggtggtt ctgatacgac cgctgtggca
     4201 cttgctgtta gtaatcaaat accttgtgaa atttataccg acgttgatgg tgtgtatgcc
     4261 actgacccaa gacttttacc aaaggctaaa cgactagaca tcgtctcata tgaagaaatg
     4321 atggaaatga gcgctttagg tgctggtgta cttgaaacaa gaagtgttga attagctaaa
     4381 aactataata tccctttata tttaggaaaa actttatcga acgtgaaagg aacatggatt
     4441 atgtcaaatg aagaaatatt agagaaaaaa gcagttactg gtgtggcttt ggataaacat
     4501 atgatgcatg taacaattag ttatccccta cctgacaatc agctacttac ccaactattt
     4561 acggaacttg aagaaggtgc tgtaaatgtt gatatgattt cacaaatcgt caacttggat
     4621 gggctacaac tatccttcac gattaaagat agtgattttc atcaaatttc tatgattctt
     4681 gaaacattaa agaatcaata tgaagcatta gcttataaaa tcaatgagca ttatgtcaaa
     4741 atttcattaa ttggctcagg catgcgtgat atgtcaggtg tggcatcaaa agcatttttg
     4801 acattaattg aaaataatat acctttctac caaacaacaa catctgaaat aagtatttca
     4861 tacgtcattg atgattttaa tgggcaacaa gcggtagaaa aactatatga cgcatttaac
     4921 atttaatggt aaaatgattg ttaaaatatt ctaaaaattg gaaattatta taaaatggag
     4981 tgacaagtta tgaaaaagtt agcagttgtg ggtgcaacag gattagtagg tacaaaaatg
     5041 ttggagacat taaatcgtaa aaatattcct ttcgatgaat tagtattatt ttcatcagca
     5101 cgttctgcag ggcaagaagt tgaatttcaa ggaaaaacat atacagttca agaattaact
     5161 gatgctcgtg caagtgaaca tttcgattat gtattaatga gtgctggtgg cggtacaagc
     5221 gaacactttg ccccactttt tgaaaaagct ggtgcaatcg ttatagacaa ttcaagtcaa
     5281 tggcgtatgg cagaagatat tgatttaatc gttccggaag tcaatgaacc tacatttaca
     5341 agaggtatca ttgccaatcc aaactgctct acgattcaat ctgttgtacc tctaaaagta
     5401 ttgcaagatg cttatggttt aaaacgagtg gcatatacaa catatcaagc tgtatcaggt
     5461 tcagggatga aaggtaagaa agatttagct gaaggtgtaa atggtaaagc accagaagca
     5521 tatccacatc caatttataa taatgtgtta ccgcatattg atgtgttttt agaaaacgga
     5581 tatacaaaag aagaacaaaa aatgattgat gagacgagaa aaattttaaa tgcgccagac
     5641 ttaaaagtaa cagcaacatg cgcacgtgtg cctgttcaag atagtcatag tgttgaaatt
     5701 gatgtaacgc ttgacaaaga aacaacagca gaagatatta aagcgttatt tgatcaagat
     5761 gaccgcgttg ttttagtaga caatccagag aacaatgaat atccaatggc aatcaattct
     5821 actaataaag atgaagtgtt tgttggccgt atacgtagag atgattcatt agaaaatact
     5881 ttccatgtat ggtgtacatc agacaattta ttaaaaggtg ctgcattaaa tgctgtacaa
     5941 gtattggaac aagttatgcg tttaaaagga gcgaattaaa atgacacatt tatttgaggg
     6001 tgttggcgtt gcacttacaa ccccttttac aaataacaaa gttaatattg aagctttgaa
     6061 aacacacgtt aattttttac tagaaaataa tgcccaagca atcatcgtta atggaactac
     6121 tgctgagagc cctactttaa caacagatga aaaagaacgc attctaaaaa cagttattga
     6181 tcttgtagat aaacgtgttc ctgtcatagc aggaactggc actaatgata ctgaaaagtc
     6241 aatccaagct tcaatccaag ctaaagcctt aggggctgat gcaattatgt taattacgcc
     6301 ctactacaac aaaacgaacc aacgtggttt agtcaaacac tttgaagcga ttgcagatgc
     6361 tgtgaaatta ccagtcgtgc tgtacaatgt tccttcaaga acgaacatga caattgaacc
     6421 agaaactgta gaaatattaa gtcaacatcc ttatatagtt gctttaaaag atgctacgaa
     6481 tgattttgag tatttagaag aagtgaaaaa gcgcattgat acaaattcat ttgcattata
     6541 tagtggcaat gatgacaacg tcgtcgaata ctatcaacgt ggcggtcaag gggttatctc
     6601 tgttattgcc aatgtcattc ctaaagaatt tcaagcgtta tacgatgctc aacaaagtgg
     6661 attagatatt caagatcaat ttaaaccaat cggcacactg ttatcagctt tatcagttga
     6721 tattaaccca attcctatta aagctctaac aagttattta ggatttggaa attatgaatt
     6781 acgtctacca ttggttagcc tagaagatac agatactaaa gtgcttcgtg aaacatatga
     6841 cacatttaaa gcgggtgaaa atgagtgaaa atattactaa ttggctatgg cgcaatgaat
     6901 caacgcgttg ctagattagc agaagaaaaa ggacatgaaa tcgttggggt cattgaaaat
     6961 acaccgaaag caacaacgcc atatcaacaa tatcaacata ttgcagatgt taaaggtgcc
     7021 gatgttgcaa tagatttttc aaatccaaat ctgcttttcc ctttattaga tgaagatttt
     7081 catttgccat tagttgtggc aacaactggc gagaaagaaa aactacttaa taagttagat
     7141 gaattgagtc aaaatatgcc tgtgtttttc agcgcgaaca tgagttatgg cgttcatgca
     7201 ttgactaaaa ttttagcagc tgctgttccc ctacttgatg atttcgacat cgaattgact
     7261 gaggcacatc ataataaaaa agtagatgca ccaagtggta cgttagaaaa attgtatgat
     7321 gtgatcgtat ctttgaaaga aaatgtaaca cctgtgtatg atagacatga attaaatgaa
     7381 aaacgccagc cacaagatat tggtatacat tctattcgtg gaggtacgat tgtcggtgaa
     7441 catgaagttc tatttgctgg cactgatgaa acgattcaaa tcacgcatcg tgcacaatca
     7501 aaagatattt ttgcgaatgg tgcaatacaa gcagcagaac gcttagttaa taaaccaaac
     7561 ggcttttata cgtttgacaa cttataaaca tattaaagga gatcgattat tttatggtac
     7621 aacatttaac agctgaagaa attattcaat atataagtga tgctaaaaag tctacaccaa
     7681 taaaagtata tttaaatggt aattttgaag gcatcacata tccagaaagt tttaaagtat
     7741 ttggttcaga acaatctaaa gtaatctttt gtgaagcgga tgattggaaa cctttttacg
     7801 aagcatatgg tagtcaattc gaagatatag aaattgaaat ggatcgtcgc aattctgcta
     7861 ttccattaaa agacttaaca aatacgaatg cacgaattga accaggtgcg tttattagag
     7921 aacaagccat tattgaagat ggtgctgtcg ttatgatggg cgcaacaatt aatattggcg
     7981 cagtcgttgg cgaaggtaca atgattgata tgaatgctac tctcggtggt cgtgctacaa
     8041 ctggtaaaaa tgtacatgta ggggctggcg cagtattagc aggtgtgatt gaacccccta
     8101 gtgcttcacc ggttataatc gaggatgatg tattaatcgg tgcaaatgca gttattttag
     8161 aaggtgtacg tgttggtaaa ggtgctattg ttgcagctgg cgcgattgtg acacaagatg
     8221 taccagctgg tgcagttgtt gctggtacac ctgcaaaagt gattaagcaa gcttctgaag
     8281 tacaagatac taaaaaagag attgtagcag cattaagaaa actgaatgac tagtgacgtc
     8341 aacgtataat aatttcaagg ttgagatacg attatgtctc aaccttattg tttagcattg
     8401 aataaactta tgatcacaaa tttcgaaata cgttacacta tttatatagt aatttaacac
     8461 aaaggattga taattatgaa tgaattagaa tttgttacga aacatcgccg tcatttacat
     8521 caacatcctg aattaagctt acatgaattt gaaacaactg cttatattaa agcgttttta
     8581 gatagtttaa atattaaata cgattgccca ttggaaactg gcgtcattgc atacttagaa
     8641 ggtaatggct cacatacgat agcgtataga gctgatattg atgcgttacc tattttagag
     8701 gaaaatgatg tgccttatcg cagtcaatct gatcatgtga tgcatgcttg tggacatgat
     8761 ggtcatacaa ctgcattaat gctttttgta caacgttgca aagacatgca agatgcaggt
     8821 caattaccgc aaaatgtcgt tttcattttc caacctgcag aagaaactgg tggcggtgca
     8881 aatcgattaa taaaagccgg tgcctttgat aagtatccaa ttgaagcggt atttggtatt
     8941 catgttaacc catttgctga tgaaggcatt gcagtgataa gagatgaaga aattacggcc
     9001 agcgcaacag agtatcgctt tttcttaaca ggcctgtcaa gtcatgttgc tgataaagaa
     9061 caaggtcatt cttgtggtga agcattacaa catgtattaa ctcaaatatc acaaattcaa
     9121 caatttcacc ttaacggttt gaaacgaaat attgttcata ttggtcattt taaagctggt
     9181 gaagcgatta acactgtacc aagtaatggc tatttagaag gtactattcg tacatatgat
     9241 attgatgatt taacaatcgt taaaaatcaa atgcacaaga tagcagaaag tgtcaagctt
     9301 ctgtttaatg tagattgtga agttaaattt gcagaaggtt atccccctac aatcaatagt
     9361 ccgaaattac gtactcaaat agaggacgcc ttaataaaag ctgatttaaa tgtctatgac
     9421 aaaccaacgc cattcttatt tggggaagat tttagttttt atggtcaaca actagctcca
     9481 gcttactttg tttttatagg aacacgaaat gaagataaag gttttgtaac tggtttgcac
     9541 acatcacatt taaattttga tgaaaaagtg ttaataaacg tggttaattt ttacgaaaat
     9601 ttattaaata attacaaaga ggtgtaatac attgacagca acatggtctg taaataagaa
     9661 aatattttta caaaatgcaa tcacagtcaa aaacaatcag ccattaatgg cagttgttaa
     9721 aaataatgca tatcactatg acctagaatt tgctgtaact cagtttatcc atgcaggtat
     9781 agatacattt agcacaacat cactacgaga agcaattcaa attagacaac ttgctccaga
     9841 tgcaacaatc tttttaatga atgcagttta cgagtttgat ttagtccgtg aacatcaaat
     9901 acacatgact ttgccgtcgt tgacatatta ctataaccat aaaaatgatt tagctggtat
     9961 tcatgttcac ttagaatttg aaaatttatt acatcggtct ggatttaaag atttaaacga
    10021 aattaaagaa gtattgaaag atcaccatca taatcaaaat gcaaaaatga ttattagtgg
    10081 tttatggacc cattttggat atgctgatga attcgatgtg tcagattata atgttgaacg
    10141 ttcacaatgg atggaaattg ttgaagcact tttatctgaa ggttatcagt tcgacctaat
    10201 ccatgctcaa aatagtgcga gtttttatcg ggaaggacaa atattactac cccaccatac
    10261 acatgcgcgt gtaggtattg cgttatacgg ttcaagacca tatagttcac tgaatcaaca
    10321 tgatatagtt cagtcattaa ctttaaaagc acatgttatt caagtgcgcg aagtacaagc
    10381 tggtgattat tgcggttata gctttgcctt tgaagtgact aaaaacaata caaaattagc
    10441 tgtagttgat atcggttatg gcgatggaat tttaagaact cgtgctaaac atgaagcact
    10501 tatcaatggt aaacgctacc cgatacgtgc attaatgatg agccatatgt ttgttgaagt
    10561 agatggcaat gtacatgcac aagatgaagt tattctttat aataatgata tccgcatcga
    10621 tgaatatacc tttaaaggtg ttggtgcaaa ttctgaacaa ttaagtgcta tgaatcatga
    10681 ttctttaaaa aaggagtaca tttcaaatga ctgttaaata taatcaaaat ggcgaattaa
    10741 caatggatgg tattagttta aaaacgattg cacaaagctt tggtacacct accattgttt
    10801 atgatgaact acaaattaga gaacagatgc gccgttacca tcgcgcattt aaagatagtg
    10861 gattaaaata caatatttca tacgcctcaa aggcatttac ttgcattcaa atggtcaaac
    10921 ttgtagctga ggaagattta cagttagatg ttgtttctga aggtgaatta tatacagctt
    10981 tagaagcagg ttttgaaccg agtcgcatcc atttccatgg taacaataaa acgaaacatg
    11041 aaattaggta tgctttagaa aataatatcg gttattttgt tatagattca ttagaagaaa
    11101 ttgaattaat agaccgctat gctaatgata cggttcaagt tgtattacga gttaatccag
    11161 gtgttgaagc acatacacac gaatttattc aaactgggca agaagatagt aagtttggat
    11221 tatcaattca atatggctta gctaaaaaag caattgacaa agtccaacaa tctaaacact
    11281 taaaattaaa aggtgtacat tgtcatattg gttcacagat tgaaggtaca gaagcattta
    11341 ttgaaactgc taaaattgtt ttacgttggc ttaaagagca aggcattcaa gttgaattat
    11401 taaaccttgg tggtggcttt ggtattaaat atgttgaagg tgacgaaagt ttccctatcg
    11461 aaagtggtat taaagatatt acagacgcaa taaaatccga aattaaagtt ctaggtatag
    11521 atgcaccaga aataggtatt gaaccgggac gatcaattgt aggtgaagct ggcgttactt
    11581 tatatgaagt tggaaccatt aaagaaattc cagagattaa taaatatgtt tcaatcgatg
    11641 gcggtatgag tgatcatatc agaactgcac tttatgacgc aaagtatcaa gcattgcttg
    11701 ttaatagaaa tgaagaagca gatgacagtg taactatagc tggaaaatta tgtgagtctg
    11761 gtgatatcat tattaaagac gctaaattac cttcatcagt caaacgtgga gactatcttg
    11821 ctatattatc aactggtgca tatcattact ctatggcatc caattacaat caaatgcaaa
    11881 agccttctgt gtttttctta aaagatggca aagcacgtga agttataaag cgacaatcgt
    11941 taagacaact cattattaat gatacaaaat aaaaataaac aaagtaatcc ccgaagcaca
    12001 gaaaattata ctgtgactcg gggaattttt atgcattata gatgactgta gaaaacatgc
    12061 ttggacatat act
//
LOCUS       DALPQQ010000074        11950 bp    DNA     linear   BCT 22-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus strain K18-6-464
            SAMD00233528-rid16434743.denovo.074, whole genome shotgun sequence.
ACCESSION   DALPQQ010000074 DALPQQ010000000
VERSION     DALPQQ010000074.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMD00233528
            Sequence Read Archive: DRR236061
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 11950)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11950)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001543423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001543423.1
            Genome Coverage       :: 77x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/22/2022 17:09:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,811
            CDSs (total)                      :: 2,743
            Genes (coding)                    :: 2,689
            CDSs (with protein)               :: 2,689
            Genes (RNA)                       :: 68
            rRNAs                             :: 2, 4, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 4, 2 (16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 54
            CDSs (without protein)            :: 54
            Pseudo Genes (ambiguous residues) :: 0 of 54
            Pseudo Genes (frameshifted)       :: 27 of 54
            Pseudo Genes (incomplete)         :: 27 of 54
            Pseudo Genes (internal stop)      :: 10 of 54
            Pseudo Genes (multiple problems)  :: 10 of 54
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11950
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMD00233528-rid16434743.denovo.074"
                     /strain="K18-6-464"
                     /db_xref="taxon:1280"
                     /geo_loc_name="Japan: Niigata"
     gene            87..794
                     /locus_tag="O7798_001702"
     CDS             87..794
                     /locus_tag="O7798_001702"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500269.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="prepilin peptidase"
                     /protein_id="HDC2863961.1"
                     /translation="MVVLLSYSCSCIFSFLYQFISIEETSFDYLHRRSKCDYCNSSLK
                     WYELMPIISFLLLKGRCRNCRKRISLTHFLGETFALIPIVFIKYDFTYVNATLFITTY
                     VFLLIFTMTDITSLMLDCRLIIIYCIVSLSLSMIYPVAFIIISMTTHIFYFLFRAYIG
                     YGDVLLISALSLFFPLQFTIYVILFTFVIAGLVALITMIFKPIKLLPLVPFIFISFFI
                     NSLFYNDIHQFLGGVYF"
     gene            791..1477
                     /gene="radC"
                     /locus_tag="O7798_001703"
     CDS             791..1477
                     /gene="radC"
                     /locus_tag="O7798_001703"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000692885.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA repair protein RadC"
                     /protein_id="HDC2863962.1"
                     /translation="MKIKEMVTSEMPRERLLSHGAKSLSNTELLAILINTGRKGFSSI
                     DISNELLKSASNLNELKKSSINDLIKVKGIGLQKAITLKAAFELGERMGRRAENNRIK
                     ITQPSDVADYMIPTMKDLTQEHFVILLLNSKNVVIKETCVFKGTLNSSIVHPREIFSI
                     AVRENANAIIAVHNHPSGDVTPSQEDIITTMRLKECGLILGIDLLDHIIIGDNRFTSL
                     VEAGYFDEND"
     gene            1545..1829
                     /locus_tag="O7798_001704"
     CDS             1545..1829
                     /locus_tag="O7798_001704"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500267.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDC2863963.1"
                     /translation="MTLFIIIGVLVPMVYTMQLNIKNEPVTKRNLLITLALSTLGILV
                     TALAGVIVTKQAFPLLSVAIGSIFTGIVWGLLLSGSYALIRFLSNAFGRK"
     gene            complement(1946..2143)
                     /locus_tag="O7798_001705"
     CDS             complement(1946..2143)
                     /locus_tag="O7798_001705"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_008530242.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDC2863964.1"
                     /translation="MSILTIILIALLVILLFRVGLSILRFLIYVGLVLLCIYLGYQGL
                     IWLLDFFQINSGFLPHFQFNN"
     gene            2303..2776
                     /locus_tag="O7798_001706"
     CDS             2303..2776
                     /locus_tag="O7798_001706"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500266.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4930 family protein"
                     /protein_id="HDC2863965.1"
                     /translation="MRLIFSMIKNIIAVIAIVIIVYIALKYAPFLKEQDWNPVNHDND
                     QMNQVTQPTNDAQHVYVSGEKYSLKENDLIKNVPLSQIKNVFKMIDKQEFMAVSGMNR
                     MAYNDQYIIGQRGDEFILYKFGDESMRVYNTEFEMQQDLNELGQNLQLKSENAYQ"
     gene            2850..2969
                     /locus_tag="O7798_001707"
     CDS             2850..2969
                     /locus_tag="O7798_001707"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500265.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDC2863966.1"
                     /translation="MAEQSKQKQANEQQKAQNLFARWRQLQNSNSESSNDTNK"
     gene            3169..4011
                     /gene="mreC"
                     /locus_tag="O7798_001708"
     CDS             3169..4011
                     /gene="mreC"
                     /locus_tag="O7798_001708"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500264.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rod shape-determining protein MreC"
                     /protein_id="HDC2863967.1"
                     /translation="MLKFFKNNKLIVVLCAIIVFIALIGLSIRSQSQSPPEQYIGDSV
                     SFGQRVVSYPVNFVAGTIGDFFKKGDSKESKNKISQLESKNQQLEAENEKLKKELDLK
                     DISKFDPISTTVLARNPDQWMNTIVIDKGSKSGITSNMAVMTSQGFVGRVTKVNKFSS
                     QVDLISTNTRAGKLSVNIQHGSKNIFGLIDRYDEKNSELVISDINNRDNISKGDKVVT
                     SGLADQLPSNLYIGEVTKVQNDQYGLAKEVRVKTGADLTDLSHVYVAKRDPKTIPDDE
                     SRDK"
     gene            4011..4541
                     /gene="mreD"
                     /locus_tag="O7798_001709"
     CDS             4011..4541
                     /gene="mreD"
                     /locus_tag="O7798_001709"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500263.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rod shape-determining protein MreD"
                     /protein_id="HDC2863968.1"
                     /translation="MRTLYYFLIGILLFYIDTAIGLLIPMHIGKFELVFVPHLTFMYI
                     LMMVVYRGFGVSLLLSIFLGVMTDVYFGSIYGVYLFGYILFLALIDRFFKIFYKDHSM
                     LFIIILASTLLLEVYVALIYGMLGFIQFDIIHFVVFRLLPTLIMNFVLLIMLYPLIIK
                     FLKKTNNDIDMKRRQW"
     misc_feature    4568..4695
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00559"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="ribosomal protein L21 leader region; Derived by
                     automated computational analysis using gene prediction
                     method: cmsearch."
                     /db_xref="RFAM:RF00559"
     gene            4708..5016
                     /gene="rplU"
                     /locus_tag="O7798_001710"
     CDS             4708..5016
                     /gene="rplU"
                     /locus_tag="O7798_001710"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000457386.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L21"
                     /protein_id="HDC2863969.1"
                     /translation="MFAIIETGGKQIKVEEGQEIFVEKLDVNEGDTFTFDKVLFVGGD
                     SVKVGAPTVEGATVTATVNKQGRGKKITVFTYKRRKNSKRKKGHRQPYTKLTIDKINA
                     "
     gene            5022..5342
                     /locus_tag="O7798_001711"
     CDS             5022..5342
                     /locus_tag="O7798_001711"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000633692.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosomal-processing cysteine protease Prp"
                     /protein_id="HDC2863970.1"
                     /translation="MITVDITVNDEGKVTDVIMDGHADHGEYGHDIVCAGASAVLFGS
                     VNAIIGLTSERPDINYDDNGGHFHIRSVDTNNDEAQLILQTMLVSLQTIEEEYNENIR
                     LNYK"
     gene            5354..5638
                     /gene="rpmA"
                     /locus_tag="O7798_001712"
     CDS             5354..5638
                     /gene="rpmA"
                     /locus_tag="O7798_001712"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009382703.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L27"
                     /protein_id="HDC2863971.1"
                     /translation="MLKLNLQFFASKKGVSSTKNGRDSESKRLGAKRADGQFVTGGSI
                     LYRQRGTKIYPGENVGRGGDDTLFAKIDGVVKFERKGRDKKQVSVYAVAE"
     gene            5993..7285
                     /gene="obgE"
                     /locus_tag="O7798_001713"
     CDS             5993..7285
                     /gene="obgE"
                     /locus_tag="O7798_001713"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020444729.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GTPase ObgE"
                     /protein_id="HDC2863972.1"
                     /translation="MFVDQVKISLKAGDGGNGITAYRREKYVPFGGPAGGDGGKGASV
                     VFEVDEGLRTLLDFRYQRHFKASKGENGQSSNMHGKNAEDLVLKVPPGTIIKNVETDE
                     VLADLVEDGQRAVVAKGGRGGRGNSRFATPRNPAPDFSEKGEPGEELDVSLELKLLAD
                     VGLVGFPSVGKSTLLSIVSKAKPKIGAYHFTTIKPNLGVVSTPDQRSFVMADLPGLIE
                     GASDGVGLGHQFLRHVERTKVIVHMIDMSGSEGREPIEDYKVINQELAAYEQRLEDRP
                     QIVVANKMDLPESQDNLNLFKEEIGEDVPVIPVSTITRDNIDQLLYAIADKLEEYKDV
                     DFTVEEEESVGINRVLYKHTPSQDKFTISRDDDGAYVVSGNAIERMFKMTDFNSDPAV
                     RRFARQMRSMGIDDALRERGCKNGDIVRILGGEFEFVE"
     gene            7298..7753
                     /locus_tag="O7798_001714"
     CDS             7298..7753
                     /locus_tag="O7798_001714"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500258.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ACT domain-containing protein"
                     /protein_id="HDC2863973.1"
                     /translation="MDNKDYKKFYLIREDVLPESVVKTLKIKDALKSDPTLSIYDAVK
                     QFDLSRSAFYKYRETIFPVDDKMLDHREFTLILYVTDIVGMLARVLDVISKLELSVLT
                     IHQSIPMEEKATITLSLNAKSKETSVEDVIGALRNLDYVSKVELISMSM"
     gene            7767..8369
                     /gene="ruvA"
                     /locus_tag="O7798_001715"
     CDS             7767..8369
                     /gene="ruvA"
                     /locus_tag="O7798_001715"
                     /EC_number="3.6.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500257.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Holliday junction branch migration protein RuvA"
                     /protein_id="HDC2863974.1"
                     /translation="MYAYVKGKLTHLYPTHVVVETAGVGYEIQTPNSYRFQKHLDHEV
                     LIHTSLIVREDAQLLYGFSSEEEKDMFLSLIKVTGIGPKSALAILATSTPNEVKRAIE
                     NENDTYLTKFPGIGKKTARQIVLDLKGKVKITEEDSDSLLQVDATSTVQDQFVQEAML
                     ALEALGYSKRELAKVEKTLNKNKYDSVDEAVKAGLQLVVS"
     gene            8401..9405
                     /gene="ruvB"
                     /locus_tag="O7798_001716"
     CDS             8401..9405
                     /gene="ruvB"
                     /locus_tag="O7798_001716"
                     /EC_number="3.6.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500256.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Holliday junction branch migration DNA helicase
                     RuvB"
                     /protein_id="HDC2863975.1"
                     /translation="MNERMVDQSMHSEETDFELSLRPTRLRQYIGQNSIKSNLEVFIK
                     AAKLRHEPLDHVLLFGPPGLGKTTLSNIIANEMEVNIRTVSGPSLERPGDLAAILSGL
                     QPGDVLFIDEIHRLSSVVEEVLYPAMEDFFLDIIIGKGDEARSIRIDLPPFTLVGATT
                     RAGSLTGPLRDRFGVHLRLEYYNESDLKEIIIRTAEVLGTGIDEESAIELAKRSRGTP
                     RVANRLLKRVRDFQQVNEDEQIYIETTKHALGLLQVDQHGLDYIDHKMMNCIIKQYNG
                     GPVGLDTIAVTIGEERITIEDVYEPFLIQKGFLERTPRGRKATPLAYEHFAKSNEERE
                     "
     gene            9407..10432
                     /gene="queA"
                     /locus_tag="O7798_001717"
     CDS             9407..10432
                     /gene="queA"
                     /locus_tag="O7798_001717"
                     /EC_number="2.4.99.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500255.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA preQ1(34) S-adenosylmethionine
                     ribosyltransferase-isomerase QueA"
                     /protein_id="HDC2863976.1"
                     /translation="MNIEEFDYDLPESLIAQTPLKDRDHSRLLVMDRETGEMKHLHFK
                     DIIEYFRPGDTLVLNDTRVMPARLFGLKEETGAKVEMLMLTQIEGNDWEVLLKPAKRI
                     KVGNKLNFGNGKIIAECIKEMDQGGRIMRLHYEGILQERLDELGEMPLPPYIKERLDD
                     PDRYQTVYAKESGSAAAPTAGLHFTDELLIEIKNKGVNIAFVTLHVGLGTFRPVSVDD
                     VNDHEMHSEYYQMTQETADLLNDTKSKGHRIISVGTTSTRTLETIRRDHDKFVETSGW
                     TNIFIYPGFDFKAIDGQITNFHLPKSTLVMLVSAFSSRENVLNAYKTAVNLEYRFFSF
                     GDAMLII"
     gene            10455..11594
                     /gene="tgt"
                     /locus_tag="O7798_001718"
     CDS             10455..11594
                     /gene="tgt"
                     /locus_tag="O7798_001718"
                     /EC_number="2.4.2.29"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016425271.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA guanosine(34) transglycosylase Tgt"
                     /protein_id="HDC2863977.1"
                     /translation="MPAVTYEHIKTCKQSGARLGIVHTPHGSFETPMFMPVGTKATVK
                     TMSPEELRQIEAKIILGNTYHLWLQPGNDIIKHAGGLHKFMNWDGPILTDSGGFQVFS
                     LSNLRKITEEGVEFRHHTNGSKLFLSPEKSMQIQNDLGSDIMMAFDECPPMPAEYDYV
                     KKSIERTTRWAKRCLDAHQRPEDQALFGIIQGGEYEDLREQSAKDLVELDFPGYAIGG
                     LSVGEPKPVMYKMVEHTEQFMPKDKPRYLMGVGSPDALIECSIRGMDMFDCVLPTRIA
                     RNGTCMTSQGRLVIKNAKFADDLRPLDENCDCYTCQNYSRAYIRHLIKAEETFGIRLT
                     TIHNLHFLLKLMEDIRQAIREDRLLDFKEEFFEQYGLNVENPKNF"
     gene            11613..11873
                     /gene="yajC"
                     /locus_tag="O7798_001719"
     CDS             11613..11873
                     /gene="yajC"
                     /locus_tag="O7798_001719"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500253.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="preprotein translocase subunit YajC"
                     /protein_id="HDC2863978.1"
                     /translation="MQFSLLIYIVVIFAVMYFLMIRPQQKRAKQHRELINNIQSGQRI
                     TTIGGIKGTVKAVDETTVVITVNGHGTELTFEKPAIKQVDPS"
BASE COUNT         4195 a         1627 c         2302 g         3826 t
ORIGIN      
        1 atgaaaaagc ggttcaattc ttgaaaaata gtgtatattt acattttggt aataactaac
       61 tataatttac ataaggaggt tgtcatttgg tagtattgtt atcttatagt tgcagttgta
      121 tttttagttt tctatatcaa tttatatcta tagaagaaac gtcatttgat tatttacata
      181 gaagatcgaa atgtgattat tgtaattcgt cactcaaatg gtatgaatta atgccgatta
      241 ttagtttttt attattaaaa gggcgatgtc gaaactgtcg aaagcgtatt tccctaacac
      301 atttcttagg ggaaaccttt gctttaatac ctatcgtctt tattaagtat gatttcacat
      361 acgtaaatgc tacgctattt ataactacat atgtttttct gcttattttt actatgaccg
      421 atatcacttc tttaatgtta gattgtcgct taattataat ttattgtatc gtttctctct
      481 cgttaagtat gatttatcca gtagctttta tcattattag tatgaccacg catatattct
      541 actttttatt tcgggcatat attggttatg gtgacgtttt actaatatct gcactttctt
      601 tgtttttccc tctccaattc actatttatg tcattttatt tacatttgtc attgctggtt
      661 tagttgcttt aattaccatg atatttaagc cgattaaact attacccctt gttccattta
      721 tatttatttc cttttttatc aattcacttt tttataatga tatccatcaa tttttaggag
      781 gcgtatattt ttgaaaatta aagaaatggt aacttcagaa atgccaagag aacgtttgtt
      841 aagccatggt gcaaaaagtc tttcgaatac agaattatta gctatattaa ttaacaccgg
      901 aagaaaagga ttctcgagca tagacattag taatgaactg cttaaatctg cttcgaatct
      961 gaatgaattg aaaaaatctt caattaacga tttgataaaa gttaaaggga ttggattaca
     1021 aaaagcaatt actttaaaag cagcatttga gttaggggaa aggatgggga gaagagctga
     1081 aaataatcgt ataaaaataa cgcaaccaag tgatgttgct gattatatga ttccaacaat
     1141 gaaagattta acacaagaac attttgtcat tttattgtta aattcaaaaa atgtagtgat
     1201 taaagaaacc tgtgttttta aaggtacatt aaatagttcg attgtacatc cacgtgaaat
     1261 ttttagtatt gcggtgagag aaaatgccaa tgcaatcatc gcagttcata atcatccatc
     1321 cggtgatgta acgccctcac aagaagatat cataacaaca atgaggttga aggagtgtgg
     1381 tttgatttta gggatagatt tattggatca tattataatc ggtgataata gatttaccag
     1441 tcttgtagaa gcgggttact ttgatgaaaa tgattgaagt tgatagaatt aatgacgtat
     1501 cttgtgtata atacctacga agtactttca ttggaggaaa aatagtgact ctatttatta
     1561 ttatcggggt tctcgtgcca atggtttata ccatgcagtt aaatattaaa aatgaacctg
     1621 taacaaagcg caatctttta ataacattag ctttatctac gttaggtatt ttagtaaccg
     1681 cgttagcagg tgtaatcgtt acgaaacaag cttttccttt attaagtgta gcaattggct
     1741 caatttttac tggaatcgtt tggggccttt tactaagtgg tagctacgcg ctgatacgat
     1801 ttttatctaa cgcatttggg cgtaagtaat agtaatctgt tcatcaagta gtatccgtgc
     1861 ttgaaaacaa actaaaactc ctaatgtgga actagttaaa aaattctaaa ctagtacatt
     1921 aggagttttg ttatgcagaa taaatttaat tgttaaattg aaagtgcggt aaaaatccac
     1981 tatttatttg aaaaaaatcg agcaaccaaa ttaaaccttg atatcctaag taaatacata
     2041 ataaaacaag tccgacataa attaaaaatc gcaaaataga aagtccaact ctaaaaagga
     2101 ggatgactaa tagtgctatt aaaataattg ttagtatact caatgctaca aacctcctaa
     2161 tacgctttta aatcataaca aaattataag ctattttaaa tgaacgtgca tcagtcctaa
     2221 gatatatcat gattaaggct gaagactgag gaaaatatac ataataaaat atataattag
     2281 atgaagacat tggaggcgaa ctatgagatt gatatttagt atgattaaaa acattatagc
     2341 agtaatagca attgtgataa ttgtttatat cgccttgaaa tacgcacctt ttttaaaaga
     2401 acaagattgg aatcctgtaa atcacgataa tgatcaaatg aatcaagtta cgcaacccac
     2461 taatgatgcc caacatgttt atgtaagtgg tgagaaatat tcattaaaag aaaatgattt
     2521 aataaagaat gtaccattaa gccaaattaa aaatgtattt aaaatgatag ataaacaaga
     2581 gtttatggct gtgtctggaa tgaatcgcat ggcttataat gatcaatata ttataggtca
     2641 aagaggagac gaatttattc tttataaatt tggagatgag tcaatgcgtg tttacaatac
     2701 tgaatttgaa atgcaacaag acttaaatga attagggcaa aatttacaac taaaatctga
     2761 aaatgcttat caataggaaa ttattgcata agaaatatat tttagttatc ctgtcactag
     2821 aataaattta aaaggttggt gtagttcaaa tggcagaaca atcaaaacag aaacaagcta
     2881 atgaacaaca aaaggcccag aacttattcg cacgttggag acaacttcag aattcgaaca
     2941 gtgaatcctc gaacgataca aacaaataat tttaaaattt aaatcgatta tttaaactac
     3001 tagtgactgg aatgtttgct agtagttttt ttgtttttaa aatgccacaa attttttacg
     3061 gagttgttca ttttcaaagt aattcgtagt tagtgcttta tttcataatg ggagtaatat
     3121 aaaatagaaa aggatataca atattttgac ataatagagg tgttctgggt gcttaagttt
     3181 tttaaaaata acaaattaat tgttgtttta tgtgcaatta tcgtttttat tgcattaatt
     3241 gggctgtcca tacgttcaca atctcaatca cctcctgaac aatatatagg tgattctgtg
     3301 tcttttggac aacgagttgt gagttatcca gttaattttg ttgctggtac gattggggac
     3361 ttttttaaaa aaggagattc taaagaatct aaaaataaga ttagccagtt agaatctaag
     3421 aaccaacaat tagaagcgga aaatgaaaaa ttaaaaaaag agcttgattt aaaagatatt
     3481 tcaaaatttg atcctatttc tactacggtt ttggcaagaa atccggatca gtggatgaat
     3541 acaattgtaa ttgataaggg atctaaatca ggtataactt caaatatggc tgtgatgaca
     3601 tcacaaggtt ttgttggaag agttactaaa gttaataaat tttcttcaca agttgattta
     3661 atctcaacta atacacgtgc gggtaaatta tctgtaaata tacaacacgg ttctaaaaat
     3721 atatttggtt taattgatcg ttatgatgaa aagaactcag aacttgtaat tagtgacatt
     3781 aataatagag ataatatctc aaaaggtgat aaagtcgtta caagtggatt agctgatcaa
     3841 ctaccaagta atttatatat aggagaagtg actaaggttc aaaatgatca atacggctta
     3901 gctaaagaag ttagggttaa gactggtgcg gacttaacag atttgagtca tgtttatgtt
     3961 gcaaaaagag atcctaaaac aattcctgat gatgaaagca gggataaata atgcgtacac
     4021 tgtattattt tttgataggt attttactat tttatataga tactgcaatt gggcttctta
     4081 ttccaatgca cataggtaag tttgaacttg tatttgtacc acaccttaca tttatgtata
     4141 ttttaatgat ggtagtgtat cgtggctttg gcgtatcatt attgctcagc atatttttag
     4201 gcgtaatgac tgatgtatac tttggtagta tttatggagt gtacttattt ggctatatat
     4261 tgtttttagc acttatagat cgattcttta aaatttttta caaagatcat tcgatgttat
     4321 tcattattat attagccagc accttattat tagaagtcta tgtggcatta atatacggta
     4381 tgttaggatt cattcaattt gatattattc attttgtagt ctttagatta ttgccaacat
     4441 taattatgaa ttttgtactg ttgattatgc tttatccgtt gattataaag ttccttaaaa
     4501 aaacaaacaa tgacattgac atgaaacgtc gtcaatggta agatgcaata gttgagtagt
     4561 tataagtagc tacatacaac cgctcaaata taggttcaag aacattttta atgaagaaag
     4621 cgattttccc acagagtgca aacgcttgac tcaataacga aatgtcacct atgtatggcg
     4681 tgacttatta tacaggaggt gcaaagtatg tttgctatta ttgaaacagg tggaaaacaa
     4741 atcaaagtag aagaaggtca agaaatcttc gttgaaaaat tagacgtaaa cgaaggagat
     4801 acttttacat ttgataaagt attatttgta ggtggagatt cagttaaagt tggagcgcca
     4861 acagttgaag gtgcaacagt tactgctact gttaataaac aaggtcgcgg taaaaaaatc
     4921 actgtattca catacaaacg tcgtaaaaat tcaaaacgta aaaaaggcca tcgtcaacca
     4981 tacactaaat taacaatcga taaaatcaac gcgtaattat tatgattact gttgatatta
     5041 cagttaatga tgaaggcaaa gtaacagacg ttattatgga tggccatgct gaccatggtg
     5101 aatatggtca tgatatcgtt tgtgctggag cttcagctgt attgtttggt agtgttaatg
     5161 cgattatagg attgacatct gagagaccag atatcaatta tgacgacaat ggtggtcatt
     5221 ttcatataag aagcgttgat acaaacaacg atgaagcgca actaattctt caaacaatgc
     5281 ttgtgtcttt acaaactatt gaagaagaat ataatgagaa tattagatta aattataagt
     5341 gaggtgcatt ccgatgttaa aattaaactt acaattcttc gcatctaaaa aaggggtaag
     5401 ttctacaaaa aacggacgtg actctgaatc aaaacgctta ggtgctaaac gtgctgacgg
     5461 tcaattcgta acaggtggtt caattttata tcgccaacgt ggtactaaaa tttaccctgg
     5521 tgaaaatgta ggtcgtggtg gcgatgatac attattcgct aaaatcgacg gcgttgttaa
     5581 attcgaacgt aaaggtcgcg acaaaaaaca agtttctgta tatgcagtag ctgaataatt
     5641 ttgtctagtt aacaccagaa gtgaatcttc tggtgttttt tactttttat aaaatgtttt
     5701 tcattattat tttcattatg ttattaaaaa atgggaattt tagacgttat actaaatgtg
     5761 caactgtata agagccccta atcactaaac tataaggggg acaaaggaat acagttgcag
     5821 cgtttaaaga ataaactgta ccacaattgg tgctgagaaa tataagtatt ttaaagcaaa
     5881 gatttataaa agtaactgca taagagcccc taattattta caatatataa ggggctctaa
     5941 tatgctataa ttattgggaa aatgaaaatt atatgtaaaa gaggtgagat atatgtttgt
     6001 cgatcaagtc aaaatatctc ttaaagccgg tgatggtggt aatggtatta ccgcatacag
     6061 aagagaaaaa tatgtaccat ttggtggacc agctggcggt gacggtggta aaggtgcttc
     6121 agtcgtattt gaagtggatg aaggtttaag aacgttatta gattttagat atcaacgtca
     6181 ttttaaagca agcaaaggtg aaaatggcca aagtagtaat atgcatggta aaaatgcgga
     6241 agatttagta ttaaaagttc cacctggtac aattattaaa aatgttgaaa cagacgaagt
     6301 gttagcagat cttgttgaag atggtcaaag agctgtagta gcgaagggcg gtcgaggtgg
     6361 ccgaggtaat tcacgttttg caacacctag aaaccctgca cctgacttca gtgaaaaagg
     6421 tgaaccaggt gaggaattag atgtatcttt agaattgaaa ttattagctg atgtaggatt
     6481 agtaggtttc cctagtgtgg gtaaatcgac tttattatct atcgtttcaa aagctaagcc
     6541 taaaattggg gcatatcatt ttacaacgat taaaccaaat ctaggtgttg tttcaacgcc
     6601 tgatcaacgt agttttgtta tggcagattt accaggttta attgaaggtg catctgatgg
     6661 cgttggatta ggacatcaat ttttaagaca tgtagagaga acaaaagtta ttgttcacat
     6721 gattgatatg agcggttctg aaggtagaga acctattgaa gattataaag tcattaatca
     6781 agaattagct gcgtacgagc aacgtttaga agatagacct caaatcgtag tagctaacaa
     6841 gatggattta cctgaatcac aagataattt aaacttgttt aaagaagaaa ttggcgaaga
     6901 tgtgccagtt attccagttt caacaataac gcgtgataat attgatcaat tattatatgc
     6961 aatagcagat aaattagaag aatataaaga tgttgacttc acagttgaag aagaggagtc
     7021 agttggcatt aaccgagtat tatataaaca tacaccgtca caagataaat ttacaatttc
     7081 aagagatgat gatggtgctt atgtggtaag tggtaatgct attgaaagaa tgtttaaaat
     7141 gactgacttt aacagtgatc cagcagtacg tcgatttgct cgtcaaatgc gttcgatggg
     7201 tattgatgat gcgcttagag aacgtggttg taaaaatggt gatatcgtta gaattcttgg
     7261 cggagaattt gaattcgttg aataggagcg aaacatgatg gacaataaag attataaaaa
     7321 gttttattta attagagaag atgtcttgcc tgaatccgtg gttaaaacat tgaagattaa
     7381 agatgcctta aaaagtgatc cgacattgtc catttatgat gccgttaaac agtttgatct
     7441 atctagaagt gctttttata aatatagaga aacgatattt ccagtagacg ataaaatgct
     7501 tgaccatcga gaatttacat taattttata tgtaactgat attgttggta tgttggcacg
     7561 tgtactagat gttatatcaa agttagaact atctgtatta acgattcatc aaagtattcc
     7621 aatggaagaa aaagcaacaa taacattatc actgaatgct aaatctaaag aaacttcagt
     7681 agaagatgtt attggcgctt tgagaaattt agattatgta tcaaaagtag aattaattag
     7741 tatgagtatg taaggatgtg cctataatgt acgcgtatgt caaaggtaag ttaacacatt
     7801 tatatcctac acacgtagtt gttgaaactg ctggtgttgg ttatgaaatt caaacaccaa
     7861 attcttatcg ttttcaaaag catctagatc atgaagtttt aattcataca tctttaattg
     7921 ttcgtgaaga tgcacaatta ttgtatggat ttagtagtga agaagagaaa gatatgttct
     7981 tgagtttaat taaagttact ggtattggtc cgaaatcagc tttagctatt ttagcgacaa
     8041 gtacgcctaa tgaagtaaaa cgtgccattg aaaatgaaaa tgatacgtat ttaactaaat
     8101 tcccaggaat tggtaagaaa acggcaagac agattgtctt agatttaaaa ggtaaagtga
     8161 aaattactga agaagatagc gattcattat tacaagtaga cgctacttcg acggtgcaag
     8221 atcaattcgt gcaagaagca atgttagcgt tagaagcatt aggttattct aaacgagagc
     8281 ttgcaaaagt tgagaaaacg ttaaataaaa ataaatatga ctcagttgat gaagctgtta
     8341 aggcaggtct tcaattagtt gtatcttaat tttaaataga ttaatagggg aagtgttgtc
     8401 atgaatgagc gtatggttga tcaatcaatg catagtgaag aaactgattt cgaattgtcg
     8461 cttagaccta cgagattacg acaatatatt ggtcaaaatt caataaaaag taatttagaa
     8521 gtatttatta aagcggctaa acttcgtcat gaaccattag atcatgtatt gctttttggc
     8581 ccccctggat taggtaagac aacattatct aatatcattg ccaatgaaat ggaagttaat
     8641 atacgtacag tatcagggcc ttcattagaa agacctggtg atttggctgc aattttatca
     8701 ggacttcaac ctggagatgt tttgtttatt gatgaaatac acagactgag tagtgttgtt
     8761 gaagaagtgt tataccctgc aatggaagat ttctttttag atattatcat tggtaaaggc
     8821 gatgaggcta gaagtatccg tatcgactta cctccattca ctttggtagg tgcaacaacg
     8881 cgagctggca gcttaacagg tccactaagg gatcgatttg gtgtgcactt aagattagaa
     8941 tattataacg aatcagattt aaaagaaatc attattagaa cagctgaggt tttaggcaca
     9001 ggtattgatg aagaaagtgc cattgaactt gctaaacgtt ctagagggac tccaagagta
     9061 gcaaatcgac tattgaagcg ggtaagagac ttccagcaag tgaatgaaga tgaacaaata
     9121 tacattgaaa caacgaagca cgcattaggt ttacttcaag ttgatcaaca cggactagat
     9181 tacattgatc ataaaatgat gaactgtatt attaagcagt ataatggcgg acctgttggt
     9241 ttagatacga ttgccgtaac aattggtgaa gaacgtatta caattgagga cgtttatgag
     9301 ccatttctta ttcagaaagg ctttttagaa cgtacgccac gtggcagaaa agcaacacca
     9361 ttagcttatg aacattttgc aaagtcgaat gaggagagag aataacgtga atattgaaga
     9421 atttgactat gacttaccag aatcattaat tgctcaaacg cctttaaaag atcgtgatca
     9481 tagtcgttta ttagtcatgg atagagaaac tggtgaaatg aaacatttac atttcaaaga
     9541 tatcattgag tattttagac ctggtgatac attagtgctt aacgatacgc gagtaatgcc
     9601 agctagactt tttggtttaa aagaagaaac tggtgcaaaa gttgaaatgt taatgttaac
     9661 tcaaattgaa ggtaatgatt gggaagtctt actgaaacca gctaagcgta ttaaagttgg
     9721 taataaattg aattttggta atggcaaaat tatagctgaa tgcataaaag aaatggatca
     9781 aggtggacgc atcatgcgtt tacattatga aggtatttta caagaaagat tagatgaatt
     9841 aggggaaatg ccactgccac catacatcaa agaacgttta gatgatccag atcgttatca
     9901 aacagtttac gctaaagaaa gtggttcagc ggcagcacca acagcaggat tacattttac
     9961 tgatgagtta ttaattgaaa ttaaaaataa aggtgttaat atcgcatttg ttacattaca
    10021 tgttgggtta ggtacgttta gaccggtgag cgtagacgat gtgaatgacc acgaaatgca
    10081 tagtgaatat tatcaaatga cacaagaaac agctgattta ttaaatgata ctaagtccaa
    10141 aggacatcgc attatatcag ttggtacaac ttcaacacgt acacttgaaa caattcgacg
    10201 cgatcatgat aaatttgttg aaacgagtgg ctggactaat atatttattt atccaggatt
    10261 tgattttaaa gcaattgatg gccagattac taattttcat ttaccaaaat caacattagt
    10321 tatgctagta tcagcgttta gtagtcgtga aaatgttctg aatgcttata aaacggcagt
    10381 aaatttagaa tatagattct ttagttttgg cgatgcaatg ttaattatat aaaaagaatg
    10441 tgaggatttt gaatatgcct gcagtaacat acgaacacat taaaacttgt aaacaatcag
    10501 gtgcgcgttt aggtatcgtg cacacaccac acggttcatt tgaaacacct atgtttatgc
    10561 cagttggtac taaagcaacc gttaaaacaa tgagtccaga agagttaaga caaattgaag
    10621 caaaaatcat tttgggcaac acatatcatt tgtggttaca acccggaaat gatattatca
    10681 aacacgctgg gggattacat aaattcatga attgggatgg tccgattctt acagattcag
    10741 gcggtttcca agtgtttagt ttaagtaatt tacgtaaaat tacagaagaa ggcgtggaat
    10801 ttagacatca tactaatggg tctaaattat ttttgagtcc tgagaaatca atgcaaattc
    10861 aaaatgattt aggatctgat attatgatgg catttgatga atgtccaccg atgcctgctg
    10921 aatatgatta tgtaaaaaaa tctattgaac gtacaacacg ttgggcgaaa agatgtctag
    10981 atgcacacca aagacctgaa gatcaagcat tgttcggcat tatacaaggt ggcgaatatg
    11041 aagatttaag agaacaaagt gcaaaggatt tagtagaatt agattttcct ggttatgcaa
    11101 tcggcggttt gtcagttggt gaacctaaac cggttatgta taaaatggtt gaacatacag
    11161 agcagtttat gcctaaagat aaaccaagat atttaatggg tgtaggatct ccagatgcgt
    11221 taatcgaatg tagtattcgc ggcatggata tgtttgattg tgtcttaccg acacgtattg
    11281 ccagaaatgg tacttgtatg acatcgcaag gtcgtttagt tattaaaaat gcaaaatttg
    11341 cagatgattt aagaccgtta gatgagaatt gtgactgtta tacatgtcaa aactattcaa
    11401 gagcgtatat acgtcattta atcaaggcag aggaaacttt tggtattcgt cttactacta
    11461 ttcataattt acattttctg ctaaaattaa tggaagatat aagacaagcc attcgagaag
    11521 atcgtctttt agatttcaaa gaagaattct tcgagcaata tggattaaat gttgagaacc
    11581 caaaaaactt ttaagcaaga ggagcgtata aaatgcaatt ttcattacta atatatatag
    11641 tcgtaatttt tgcggttatg tatttcttga tgatcagacc acaacaaaaa cgtgcgaaac
    11701 agcatcgtga gttgattaat aacattcaat ctggtcaaag aattacaact attggtggta
    11761 ttaaaggtac tgttaaagca gtagatgaaa caactgttgt tattacagtt aatggtcatg
    11821 gtactgaatt aactttcgaa aaacctgcta ttaaacaagt tgacccttca taatgagaag
    11881 tggtattaaa aaggatgaaa cgaatagcgt ttcatccttt ttaagttata agtagtatgt
    11941 agaatagctt
//
LOCUS       DALPQQ010000075        11949 bp    DNA     linear   BCT 22-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus strain K18-6-464
            SAMD00233528-rid16434743.denovo.075, whole genome shotgun sequence.
ACCESSION   DALPQQ010000075 DALPQQ010000000
VERSION     DALPQQ010000075.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMD00233528
            Sequence Read Archive: DRR236061
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 11949)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11949)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001543423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001543423.1
            Genome Coverage       :: 77x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/22/2022 17:09:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,811
            CDSs (total)                      :: 2,743
            Genes (coding)                    :: 2,689
            CDSs (with protein)               :: 2,689
            Genes (RNA)                       :: 68
            rRNAs                             :: 2, 4, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 4, 2 (16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 54
            CDSs (without protein)            :: 54
            Pseudo Genes (ambiguous residues) :: 0 of 54
            Pseudo Genes (frameshifted)       :: 27 of 54
            Pseudo Genes (incomplete)         :: 27 of 54
            Pseudo Genes (internal stop)      :: 10 of 54
            Pseudo Genes (multiple problems)  :: 10 of 54
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11949
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMD00233528-rid16434743.denovo.075"
                     /strain="K18-6-464"
                     /db_xref="taxon:1280"
                     /geo_loc_name="Japan: Niigata"
     gene            <1..681
                     /locus_tag="O7798_001720"
     CDS             <1..681
                     /locus_tag="O7798_001720"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501279.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HDC2863979.1"
                     /translation="AQGYIATKYNEIFTPQESFTSAYNGFSWFAFLLIIQASTIISME
                     FHYGTIKNLLYREYSRTTMIVSKIITLFIISLIYFVITIIASIVIGSLFFNDLNIFES
                     SGNQLSLLNQLLLVSLGTFVGVWLVLSLTLLLSSATNSTGVAIAVGIVFYFASSILAV
                     IQTALLEKIDWLKWNPINMMNIMLQTVEKGFSKSTKLELHELFIGNIAYISIFLILVV
                     FIFKKKNI"
     gene            1054..3018
                     /locus_tag="O7798_001721"
     CDS             1054..3018
                     /locus_tag="O7798_001721"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501280.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fructose-1,6-bisphosphatase"
                     /protein_id="HDC2863980.1"
                     /translation="MTQITEKELKKKYLDLLSQNFDTPEKLATEIINLESILELPKGT
                     EHFVSDLHGEYEAFQHVLRNGSGNVRAKINDIFKERLSTKELNDLTALVYYPEDKLKL
                     IKSDFQNCGQLNVWYITTIEHLIELIKYCSSKYTRSKLRKALPKQYVYIIEELLYKSN
                     EYQNKKSYYETLVNQVIELKQADDLIIGLAYSVQRLVVDHLHVVGDIYDRGPQPDKIM
                     DTLINYHSLDIQWGNHDVLWVGAYAGSKVCLANLLRICARYDNLDIIEDAYGINLRPL
                     LTLAEKYYDADNPAFKPKKRPDKHERLTQREESQITKIHQAIAMIQFKLEIPIIKRRP
                     NFEMEERLVLEKVNYDTNEITVYGNTYPLKDTCFQTVNRDNPAELLPEEEEVMNKLLL
                     SFQQSEKLRRHMSFLMRKGSLYLPYNGNLLIHGCIPVDENGEMESFEIDGHTYSGQEL
                     LDVFEYHVRKSFDEKENTDDLSTDLVWYLWTGKYSSLFGKRAMTTFERYFIADKASHK
                     EEKNPYYHLREDVNMVRKMLSDFGLNPDEGRIINGHTPVKEINGEDPIKADGKMLVID
                     GGFSKAYQSTTGIAGYTLLYNSFGMQLVAHQQFNAKEKILSEGIDELSIKRVVDKELQ
                     RKKIRDTNIGKDLQAQIDILKMLMHDRYLD"
     gene            3362..4441
                     /locus_tag="O7798_001722"
     CDS             3362..4441
                     /locus_tag="O7798_001722"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001566820.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDC2863981.1"
                     /translation="MRILKESIIVAFAFVGVVVGAGFATGQEIFQFFTSHGAYSISGI
                     IVTGLLITLGGMVVMHTGHHLKSRNHSDSINYFLYPSIARGFDIILTMFMLSLAIIMT
                     AGGASTIHQSFNLPYWLSALILVAFILATLFLKFDRLIAVLGGVTPFLIAIVIMIAVY
                     YFTTSHLDFTAANNDAQIHKQKSLSPGWWFDAINYASLQIAAAFSFLSVMGSKVKYRD
                     STLYGGLIGGLIITFLLMMINLGLISQFDKIKHVDLPTLKLATQMSPSIGIIMSVIMI
                     LVIYNTVVGLMYAFASRFSVPFSRRYFIIIITMAVITYISTFIGFISLIGKVFPIMGL
                     FVFILLIPVLYKGLIKRITGKSHID"
     gene            complement(4546..5139)
                     /locus_tag="O7798_001723"
     CDS             complement(4546..5139)
                     /locus_tag="O7798_001723"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501283.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HDC2863982.1"
                     /translation="MEHIFREGQNGAPTLILLHGTGGDEFDLLPLGEALNENYHLLSI
                     RGQVSENGMNRYFKRLGEGVYDEEDLAFRGQELLTFIKEAAERYDFDIEKAVLVGFSN
                     GSNIAINLMLRSEAPFKKALLYAPLYPVEVTSTKDLSDVSVLLSMGKHDPIVPLAASE
                     QVINLFNTRGAQVEEVWVKGHEITETGLTAGQQILGK"
     gene            complement(5161..6129)
                     /locus_tag="O7798_001724"
     CDS             complement(5161..6129)
                     /locus_tag="O7798_001724"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009560906.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ring-cleaving dioxygenase"
                     /protein_id="HDC2863983.1"
                     /translation="MINNHELLGIHHVTAMTDDAERNYKFFTEVLGMRLVKKTVNQDD
                     IYTYHTFFADDVGSAGTDMTFFDFPNITKGQAGTNSITRPSFRVPNDDALTYYEQRFD
                     EFGVKHEGIQELFGKKVLPFEEVDGQVYQLISDELNEGVAPGVPWKNGPVPVDKAIYG
                     LGPIEIKVSYFDDFKNILETVYGMTTIAHEDNVALLEVGEGGNGGQVILIKDDKGPAA
                     RQGYGEVHHVSFRVKDHDAIEAWATKYKEVGINNSGIVNRFYFEALYARVGHILIEIS
                     TDGPGFMEDEPYETLGEGLSLPPFLENKREYIESEVRPFNTKRQHG"
     gene            complement(6207..6641)
                     /locus_tag="O7798_001725"
     CDS             complement(6207..6641)
                     /locus_tag="O7798_001725"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501285.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MarR family transcriptional regulator"
                     /protein_id="HDC2863984.1"
                     /translation="MDRTKQSLNVFVGMNRALDTLEQITKEDVKRYGLNITEFAVLEL
                     LYNKGPQPIQRIRDRVLIASSSISYVVSQLEDKGWITREKDKDDKRVYMACLTEKGQS
                     QMADIFPKHAETLTKAFDVLTKDELTILQQAFKKLSAQSTEV"
     gene            6868..7152
                     /locus_tag="O7798_001726"
     CDS             6868..7152
                     /locus_tag="O7798_001726"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501286.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetyltransferase"
                     /protein_id="HDC2863985.1"
                     /translation="MSNLEIKQGENKFYIGDDENNALAEITYRFVDNNEINIDHTGVS
                     DELGGQGVGKKLLKAVVEHARENNLKIIASCSFAKHMLEKEDSYQDVYLG"
     gene            7323..8129
                     /locus_tag="O7798_001727"
     CDS             7323..8129
                     /locus_tag="O7798_001727"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501287.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HDC2863986.1"
                     /translation="MAFHDKTATQVTNIVLNVRDLDLMTTFYKNILGLSVKSSDDNTT
                     VLSVGTGGHTLTLHLLEDGRQTSPREAGLFHIAFLLPTTEDLANFLYFVAQKNMGIGA
                     GDHLVSEALYFNDPEGNGIEVYRDRPSSSWEWQNGKVKMDTLEVDSQTLLTHRTDEGW
                     QGMPAKGMIGHLHLKTHDLDAAYQCYIEQLGFQHVSDFPRALFMSTNHYHHHIAANTW
                     QSNQARQNNSQSYGLTHVDIYQPDASTHTFTAPEGFDITVHSNTDLVPEK"
     gene            complement(8249..8920)
                     /locus_tag="O7798_001728"
     CDS             complement(8249..8920)
                     /locus_tag="O7798_001728"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501288.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H-dependent oxidoreductase"
                     /protein_id="HDC2863987.1"
                     /translation="MSNMNQTIMDAFHFRHATKQFDPQKKVSKEDFETILESGRLSPS
                     SLGLEPWKFVVIQDQALRDELKAHSWGAAKQLDTASHFVLIFARKNVTSRSPYVQHML
                     RDIKKYEAQTIPAVEQKFDAFQADFHISDNDQALYDWSSKQTYIALGNMMTTAALLGI
                     DSCPMEGFSLDTVTDILANKGILDTEQFGLSVMVAFGYRQQEPPKNKTRQAYEDVIEW
                     VGPKE"
     gene            9190..10182
                     /locus_tag="O7798_001729"
     CDS             9190..10182
                     /locus_tag="O7798_001729"
                     /EC_number="1.1.1.28"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000161541.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-lactate dehydrogenase"
                     /protein_id="HDC2863988.1"
                     /translation="MTKIMFFGTRDYEKEMALNWGKKNNVEVTTSKELLSSATVDQLK
                     DYDGVTTMQFGKLENDVYPKLESYGIKQIAQRTAGFDMYDLDLAKKHNIVISNVPSYS
                     PETIAEYSVSIALQLVRRFPDIERRVQAHDFTWQAEIMSKPVKNMTVAIIGTGRIGAA
                     TAKIYAGFGATITAYDAYPNKDLDFLTYKDSVKEAIKDADIISLHVPANKESYHLFDK
                     AMFDHVKKGTILVNAARGAVINTPDLIAAVNDGTLLGAAIDTYENEAAYFTNDWTNKD
                     IDDKTLLELIEHERILVTPHIAFFSDEAVQNLVEGGLNAALSVINTGTCETRLN"
     gene            complement(10431..11231)
                     /locus_tag="O7798_001730"
     CDS             complement(10431..11231)
                     /locus_tag="O7798_001730"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501290.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAD family hydrolase"
                     /protein_id="HDC2863989.1"
                     /translation="MVKAIAVDMDGTFLDSKKTYDKLRFEAIFTELRNRDITFIAASG
                     NQYAKLKSIFGDRDMYFISENGAVIYNGNELYNYKSFNRQVFQQVVDYLNMKQSIDQL
                     VICGLKSAYILKHTSEAFKEDTRFYYHQLKEIDSLQQLPEDDYVKIAFNINRETHPNV
                     DEEVATQFSNDIKLVSSGHDSIDIIMPNMTKGQALKRLLDKWEMSPSELMAFGDANND
                     KDMLAFAKHSYVMENSHDEELFNIASAVAPSNDKQGVLTIIEQEVLKK"
     gene            11552..>11949
                     /locus_tag="O7798_001731"
     CDS             11552..>11949
                     /locus_tag="O7798_001731"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501291.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HDC2863990.1"
                     /translation="MKLNNYSLKVKNKQLVDNCDLNFYLGQINHIVGKNGVGKSLLAK
                     DFLLNNSGNIPKSISQNVTLISSSSNIPNDITKDFLLSLLKSKFENNRQTFDKIYNIL
                     NIEAIPSNVLLKNLSDGQKQKLKLLSFLLE"
BASE COUNT         3879 a         2138 c         1834 g         4098 t
ORIGIN      
        1 gctcaaggtt atattgctac aaaatacaat gaaattttta cgccacagga atctttcaca
       61 tctgcttata atggtttttc atggtttgca tttttattaa ttattcaagc aagtacaatc
      121 atttcaatgg aatttcatta cggtacgatt aaaaatttac tctatcgtga atattcaaga
      181 acaactatga ttgttagcaa aatcatcaca ttatttatta tttctttaat ttattttgtt
      241 attacaatta ttgcttcaat tgttattggg tctttattct ttaatgattt aaatatattt
      301 gaaagtagcg gtaatcaatt atctttattg aatcaattat tattagttag tttaggcaca
      361 tttgttggcg tttggttagt tttaagctta acgttgctat tatcatctgc aacaaattca
      421 acgggagtag ccattgctgt aggtattgtt ttttattttg caagttctat tttagcagtt
      481 attcaaacgg cacttttaga aaaaatagac tggctaaagt ggaatcctat taatatgatg
      541 aatattatgc ttcaaacagt tgaaaaaggc tttagtaagt cgacaaaatt agaacttcat
      601 gaattgttta ttggtaatat tgcttatatt tctattttct taatacttgt agtatttatt
      661 ttcaagaaga aaaatattta gtaacttaaa gtattaaatg tctaaataca cacatattcc
      721 atcgtaattc aaaatcattt tcaaatccct tcacccaaat aatggtgcgg ggattttttc
      781 atccaaattt tggaaattcc acattttaca tatcgtaatt ttttaggaaa ctagtgaata
      841 taacaaatcc ctcctctcat ttttaaaata gatatatcac ttccccactt ttacttaact
      901 aaactgcaac ggttcctaat accaaaatcc tgccctctat ttttatcaat tcaagcatac
      961 ttattgaaaa atgttaacgt tttcttgata atcattgtaa gcgcatttat tttataaact
     1021 aacgtttgaa atatactaca ggagtgacac gtaatgactc aaattactga aaaagaatta
     1081 aaaaagaagt atttagattt actatcccaa aattttgata ctccagaaaa acttgcaact
     1141 gaaattatca atttagaatc aattttagaa ttacctaaag gtacggaaca tttcgtcagc
     1201 gatttacatg gtgaatatga agctttccaa cacgtattac gcaacggttc tgggaacgtg
     1261 cgagcgaaaa tcaatgatat tttcaaagag agactttcaa ctaaggagct taatgactta
     1321 actgctcttg tctactatcc agaagacaaa ttaaaattga ttaaaagtga tttccaaaat
     1381 tgcggtcaac ttaatgtctg gtatatcaca acaatcgaac atttaattga gttaattaaa
     1441 tattgttctt caaaatatac gcgttcaaaa ctgcgtaaag cattgccaaa acaatacgtt
     1501 tatattattg aggaactact gtataaaagt aatgaatatc aaaataaaaa atcatattac
     1561 gaaacacttg ttaaccaagt aattgaactt aaacaggcag atgatttaat tattggactc
     1621 gcttattccg tacaacgctt agtcgtcgat catttacacg ttgtcggtga tatttatgat
     1681 cgtggaccac aaccagataa aattatggat acactgatta attatcattc cctagatatt
     1741 caatggggta atcatgatgt gctttgggtt ggagcctatg ctgggtcaaa agtatgctta
     1801 gcaaacttac ttcgaatttg tgcacgttat gataatttag atattatcga agacgcttat
     1861 ggcattaatt taagaccact gcttacttta gctgaaaaat actatgacgc agataatcct
     1921 gcttttaagc ctaaaaaaag acctgacaaa cacgaacgtt taactcaacg tgaagaaagt
     1981 caaattacta aaattcatca agctattgcg atgattcaat tcaagttaga aataccaatt
     2041 attaaacgtc gtccaaattt cgaaatggaa gaacgtcttg tgcttgaaaa ggttaattat
     2101 gatacaaatg aaattacagt ttatggtaat acatacccat tgaaagacac atgtttccaa
     2161 actgtcaatc gtgataatcc agcagaatta ctacctgaag aagaagaagt catgaataaa
     2221 ctattattgt cattccaaca atctgaaaaa ttacgtcgtc atatgtcttt cttgatgcgt
     2281 aaaggctctc tttacttacc atataatggc aatttactca ttcatggttg tattccagtt
     2341 gatgaaaatg gtgagatgga atcatttgaa attgatggtc atacttacag cggccaagaa
     2401 ttattagatg tgtttgagta tcatgtccgt aaatcatttg atgaaaaaga aaatactgat
     2461 gacttatcga cggatttagt ttggtattta tggactggga aatattcgtc actatttggt
     2521 aaacgtgcca tgactacgtt tgagcgatac tttattgcag ataaagcttc tcataaagaa
     2581 gaaaagaatc cgtactatca tcttcgtgaa gatgtgaata tggttcgtaa aatgctcagt
     2641 gatttcggat taaatccaga tgaaggacgc attattaatg gtcacacacc agtgaaagaa
     2701 atcaatggcg aagatcctat caaggctgat ggaaagatgc ttgtcattga tggtggcttt
     2761 tcaaaagctt atcagtcaac aactggcatt gcaggctata cactattgta taattcattc
     2821 ggtatgcaac tcgttgcaca ccaacaattt aacgctaaag aaaaaatact ttccgaaggt
     2881 atcgatgaac tttctataaa gcgcgtcgta gataaagaat tacaacgtaa gaagattcgt
     2941 gataccaata ttggtaaaga tcttcaagct caaatagata ttttgaaaat gttaatgcat
     3001 gatcgttact tagactaaag acgacatttg atgcatgtat cgtgcactta tttagtggta
     3061 ctgtgtttac gcattggcta cgcaaacacg atgataaata ggcgacctag ctacaccgaa
     3121 aaaaatcccc tcactattgc gagtagtgag gggattggtg tatctatgct aattcctgtt
     3181 aactgtatta taacaacttt acagcaaaaa aatgcaaaat caactaataa attaatgaaa
     3241 tgaccgacac cctcgcttct actccaattt aacaaaatac tatattagta ctatattttt
     3301 cattaacatg tatgttacat tttctatatt acttaaaatt acgaagggac atttttaaat
     3361 catgcgtatc ttaaaagagt ccattattgt ggcatttgcc tttgttggtg ttgtcgttgg
     3421 tgccggcttt gctactggtc aagaaatttt ccagtttttc acaagtcatg gcgcatatag
     3481 catttcaggc attattgtaa caggactatt gattacttta ggtggaatgg ttgtcatgca
     3541 tacaggtcat catctaaagt ccagaaatca ttctgattca attaactatt tcttataccc
     3601 ctctattgca agaggttttg atattatttt aacaatgttt atgttgtctt tagctattat
     3661 tatgactgca ggtggtgcgt caaccattca tcaaagtttc aacttaccgt attggctgag
     3721 cgcactcata ttagtcgcct ttattttagc aacactgttt ctaaaattcg atcgtttaat
     3781 tgctgtgctt ggcggtgtta ccccattttt aattgcgatt gtcattatga ttgcggtcta
     3841 ctatttcaca acaagtcatc ttgattttac tgccgctaat aatgatgctc agattcataa
     3901 gcagaaatca ttatcacctg gatggtggtt tgatgcgatt aactatgcaa gcttgcaaat
     3961 tgctgctgcc ttcagcttct tatcagtgat gggtagtaaa gttaaatatc gtgactcaac
     4021 gttatacggg ggcttgattg gcggtttaat cattacattt ttactcatga tgattaatct
     4081 aggtttaatt tctcaattcg ataaaattaa acacgtagat ctacctacat taaaattagc
     4141 gacacaaatg tctccgtcaa ttggtattat tatgtctgtc attatgatac ttgtcatcta
     4201 caatactgtt gttggattaa tgtatgcatt tgcgtcacgt ttcagcgttc cattcagcag
     4261 acgttacttc atcattatta ttacaatggc tgtcatcact tatattagta catttatcgg
     4321 tttcatttca ttaattggaa aagtattccc tattatggga ttgttcgttt tcatcttact
     4381 catacctgta ctctataaag gtttaattaa gcgtattacc ggcaaatctc atatcgatta
     4441 aaatatctat actattgtaa aatttagtac agcacttcaa aatcaaaaaa gcgggcagat
     4501 gaaaagtaaa aatcttttcc atctgtccgc ttcttaatag aactgttatt tcccaagtat
     4561 ttgttgacca gccgttaatc cagtttctgt aatttcatgg cccttcaccc aaacttcttc
     4621 gacttgtgcc ccacgtgtat taaacaagtt aatgacttgt tcacttgcag ctaatggcac
     4681 aattggatca tgtttcccca tagaaagcaa cacactgaca tctgataaat cctttgttga
     4741 cgttacttca actgggtata acggtgcata taacaatgct tttttaaatg gtgcttctga
     4801 acgcaacatt aagttaatcg ctatatttga tccatttgaa aatccaacaa gtactgcttt
     4861 ttcaatatca aaatcataac gttcagcagc ttctttaatg aacgtcaaca attcttgtcc
     4921 acgaaatgcc aaatcttctt catcataaac accttcacca agacgtttga aataacggtt
     4981 catcccattt tctgaaactt gtcctctaat acttaacaag tgataatttt cattcaatgc
     5041 ttcgcctaac ggtaataaat cgaactcatc accacctgta ccatgcaata atattagtgt
     5101 tggcgcacca ttttgtcctt ctctaaaaat atgttccatc acaaatcctc ctcattccaa
     5161 ttaaccatgt tgacgcttcg tattaaaagg tctaacttcc gattcaatat attctctttt
     5221 attttctaaa aatggtggta aggataaccc ttcgcctaat gtttcataag gttcatcttc
     5281 cataaatcct ggtccatctg ttgaaatttc tattaaaata tgccccacac gtgcatataa
     5341 tgcttcaaaa tagaaacgat taacgatgcc tgagttatta atacctacct ctttatattt
     5401 cgttgcccac gcttctattg catcatgatc tttcacacga aatgacacat gatgtacctc
     5461 accataacct tgacgtgctg ctggcccttt atcatctttt attaagatta cctggccacc
     5521 attgcctcct tcgccaactt caagtaatgc gacattatct tcatgcgcaa tagttgtcat
     5581 accgtaaaca gtctctaaaa tatttttaaa gtcgtcaaaa taacttactt taatttcaat
     5641 ggggcctaat ccataaatcg ctttatctac tggaaccggt ccattcttcc aaggtacacc
     5701 aggtgctacc ccttcattta actcatctga aattaattga tacacttggc catcgacttc
     5761 ttcaaatggc aacacttttt taccaaataa ttcttgaata ccttcgtgtt taacaccaaa
     5821 ctcatcaaag cgctgttcat aatatgttaa tgcgtcatcg ttaggcactc taaaagacgg
     5881 tcttgtaatg gaatttgttc ctgcctgccc ttttgtaata tttggaaaat caaagaacgt
     5941 catgtctgta cctgccgaac ctacatcatc tgcaaaaaaa gtatgatacg tataaatatc
     6001 atcttgattg actgtctttt taactaaacg catgcctagt acttctgtaa aaaatttata
     6061 attacgttct gcatcatctg tcattgcagt aacatggtga atacctagta attcatgatt
     6121 atttatcatt ttatataccc tctttatatt tttagtgcat ttatctcgaa atcgagatac
     6181 tttaatgtaa atttttagtg cacgccttac acttctgtag attgtgcact tagtttctta
     6241 aacgcttgtt gtaagattgt taattcatcc tttgttaaca catcaaacgc ttttgttaat
     6301 gtctcagcat gcttagggaa aatatctgcc atttgacttt gacctttttc agttaaacaa
     6361 gccatatata cacgtttatc atctttatcc ttttcacgtg taatccaacc tttgtcctct
     6421 aattgactta caacatatga aatgctgcta cttgcaatta atacgcggtc tctaatacgt
     6481 tgaattggtt gcggaccttt attataaagc aactcgagca ctgcaaattc agtaatattt
     6541 aagccatatc gctttacgtc ttcttttgta atttgctcta atgtgtctaa cgccctattc
     6601 attccgacaa aaacattgag agattgtttc gttcgatcca tatgatcacc aactttttta
     6661 ttttatttcg atttcgagat aaattatata gctgaataga tttaatgtca agatacgtgt
     6721 tttcatcttc atttcaaact gtgcttaata aaaacgacta catagatgtg gcaatgtcgt
     6781 cacatgactg tcatgcacct ttgacttcgt ttaagttaaa atagaatagg gaaatactat
     6841 aatcaatcat gataggagtt gatatgtatg agtaaccttg aaatcaaaca aggcgagaac
     6901 aaattctata ttggtgatga tgaaaataat gctttagctg aaatcacata ccgttttgtg
     6961 gataataatg aaattaacat tgatcataca ggcgtatctg atgaacttgg tggtcaaggt
     7021 gttggcaaaa aactacttaa agcagttgtt gaacacgctc gagaaaataa tttgaaaatt
     7081 attgcctcat gttcatttgc caaacatatg ttagaaaaag aagattcata tcaagatgta
     7141 tatcttggtt aaataaattt tgcgatggtg caactgtacc atcgcttttt tgttcgcatc
     7201 aatataaaat tgcaaaacga ctagttattt tgcatttcaa actttatgct atcaattcat
     7261 tttcttttct ggtatacttt ttatactaac ttatagaaaa atagaaaaag aggcgatgca
     7321 taatggcatt tcacgataaa acagcaacac aagtgacaaa cattgtactg aacgtaagag
     7381 acttagactt aatgacaaca ttttacaaaa acattttagg actatccgtt aaaagttctg
     7441 acgataatac aaccgtatta tctgttggga ctggtggcca tactctaacg ttacatttat
     7501 tagaagacgg ccgtcagact tccccacgtg aagcagggct ttttcatata gcatttttat
     7561 taccaactac tgaggatcta gctaacttct tatatttcgt ggcacaaaaa aatatgggca
     7621 tcggcgctgg tgatcattta gtaagtgaag ctttatattt caacgacccc gaaggtaatg
     7681 gtattgaagt ctatcgcgat agaccttcat cttcatggga atggcaaaat ggcaaagtta
     7741 aaatggatac tttagaagtt gatagccaaa ccttattaac acatcgtact gatgaaggtt
     7801 ggcaaggaat gccagcaaaa ggcatgattg gacacttaca tttaaaaaca catgatttag
     7861 acgcagcata tcaatgttac attgaacaat taggattcca acatgtgtct gattttccac
     7921 gtgcgctatt tatgtcaacg aatcattatc accatcatat tgctgctaat acttggcaat
     7981 ccaatcaagc aagacaaaac aattcacaaa gttatggatt aacacatgtt gatatttatc
     8041 aacccgacgc ctcaacacat acatttacgg caccagaagg gtttgacatc acagttcatt
     8101 caaatactga ccttgttcca gaaaaataat catccatact ttattaatac aattttttca
     8161 cgcaaaagcc tgcgattcat ttatgtaatc gcaggctttt ttattgctaa ctttttaatt
     8221 ttatatattt agacatacgg tattctattt attcttttgg tccaacccat tcaataacat
     8281 cttcataagc ttggcgtgtt ttatttttcg gtggctcttg ttgtctgtag ccaaatgcga
     8341 ccatcactga taaaccaaat tgctcagtat ctaagatccc tttatttgct aaaatgtctg
     8401 tcactgtatc cagactaaaa ccttccatcg gacatgaatc aatacctaac aatgcggctg
     8461 tcgtcatcat attgcctaat gcaatatacg tttgtttact tgaccagtca tacaaggctt
     8521 gatcattatc agaaatatgg aaatctgctt ggaatgcatc gaatttttgt tcaacagctg
     8581 gaatcgtttg tgcctcatat tttttaatat ctcttaacat atgttgtaca tacggtgatc
     8641 ttgacgttac atttttacgc gcaaaaatta gcacaaaatg gctcgctgta tctaattgtt
     8701 ttgctgcgcc ccaactgtgc gcttttaatt catcacgtaa cgcttgatct tgaatcacga
     8761 caaacttcca aggttctaac ccaagagaac ttggagacaa tctacctgac tctaatattg
     8821 tttcaaaatc ttctttcgaa actttctttt gtggatcgaa ttgcttagtc gcatgtctga
     8881 aatgaaatgc atccataatt gtttgattca tattgctcat tgaacatagc ctcccatttt
     8941 tatatttatt gctatacaaa ttatacttca tgttttaaaa agactaaagt aatccgtttg
     9001 caattcacta taacttgtgc acatgttata agttttctgc aataaaacac acttttgaat
     9061 tttgggaaat ttagtgttat aatatatttg tgatattttt cgcaattaaa ttgtggcgtg
     9121 attttaatgt gcataatctt taatttcact catttacttt tcaatctttt aaaagcgagg
     9181 tttttaataa tgacaaaaat tatgttcttt ggtacgcgtg attatgagaa agagatggca
     9241 ttaaattggg ggaaaaagaa taatgtcgaa gtaactactt ctaaagagct attatcaagt
     9301 gctacagtcg atcaattaaa agattacgat ggcgtaacta caatgcaatt tggtaagtta
     9361 gaaaatgacg tttatcctaa attagaatct tacggtatta aacaaattgc acaacgtact
     9421 gctggatttg atatgtatga tttagattta gctaaaaaac acaatattgt gatatctaac
     9481 gttcctagtt attcacctga aacaattgca gagtattctg tttctatcgc cctacaatta
     9541 gtgcgtcgct tcccagatat tgaacgccgt gtacaagcac atgattttac ttggcaagca
     9601 gaaatcatgt ctaaaccagt taaaaatatg actgttgcaa ttattggtac gggtcgtatc
     9661 ggtgctgcta cagctaaaat atatgcagga tttggtgcta caattacagc ttatgacgcc
     9721 tatcctaata aagatttaga ctttttaact tataaagata gtgttaaaga agctattaaa
     9781 gatgccgata ttatttcttt acatgttcca gcgaacaaag aaagctatca tttattcgat
     9841 aaagcaatgt ttgatcatgt gaaaaaaggt acaatcttag ttaacgcagc acgtggtgca
     9901 gtcatcaata cacctgattt aatcgctgca gtgaacgatg gtactttgtt aggtgctgcg
     9961 attgatactt atgaaaatga agcagcatac ttcacaaatg actggactaa taaagacatt
    10021 gacgataaaa cattattaga gttaatcgaa catgaaagaa ttttagtaac accacatatt
    10081 gctttcttct ctgatgaagc agtacaaaac cttgttgaag gtggtttaaa cgcagcatta
    10141 tctgtcatta acactggtac atgtgaaaca cgtttaaatt aatatatata tttaaaagca
    10201 aaggcgcgcc atgtgccttt gctttttatt ttgtatatct gtatcaaaat cgatttgatt
    10261 aaaatccgct ttattttatc atctattcaa atgattttag tgcgcttatt ttactatggc
    10321 attattgcct aacctgtttg agatatatta atatttgatg attcgtattc aaagttttca
    10381 tttaacatgt atttagtatc atgatagctg cttcattgat gatatactac ctactttttc
    10441 aacacttctt gttcgataat cgttaataca ccctgcttat cattacttgg agcgacagca
    10501 gaggcaatat tgaacaattc ttcatcatga ctattttcca tcacataact atgcttagcg
    10561 aacgctaaca tatctttatc attattcgca tctccgaagg ccatgagctc tgaaggagac
    10621 atttcccatt tatctaacaa tcgttttaat gcctgccctt tagtcatgtt tggcataata
    10681 atatcaatgc tatcgtgccc acttgagaca agtttaatat cattgctgaa ttgcgttgct
    10741 acttcttcgt caacattcgg atgcgtctca cgattaatat taaatgctat tttgacataa
    10801 tcatcctcag gtaattgctg tagactgtca atttctttta actgatgata ataaaatctc
    10861 gtatcttctt taaacgcttc agaagtatgt tttaaaatat acgcgctttt caaaccacag
    10921 atgacgagtt gatcaatact ttgcttcata tttaagtaat cgacaacctg ttgaaacacc
    10981 tgacgattaa agcttttata attatataac tcattgccat tataaataac tgcaccattt
    11041 tcagaaataa aatacatatc tctatccccg aaaatagact tcaacttcgc atattgattg
    11101 ccactcgcag caataaatgt aatatctcta tttctaagtt cagtaaaaat cgcttcaaat
    11161 ctaagtttat catatgtctt ttttgaatct aaaaacgtcc cgtccatatc taccgcaata
    11221 gccttaacca tgattatcct cctcattgct cttttagtcg tcttcattat atccatctca
    11281 tgacaagcaa tgaagtttgt cataccacaa tgaacctata ttcacatttt gaaattgctt
    11341 tcatatatgc aaaacacatt acactggata tagcattcag aggcgaacat aaatttcaga
    11401 atattgtaaa aatataacga tatatttatc atttagacaa aatatagtgt gatatactaa
    11461 tttataacat ctatacataa tgtgaaagaa tttttaaaaa tacaattaaa tatcggtgta
    11521 ataaatccct ttatacatag gagttgtata catgaaacta aataactatt ctttaaaagt
    11581 taaaaacaaa caactagttg acaattgtga tttaaatttc tatcttggtc agatcaatca
    11641 cattgttggt aaaaatggtg taggaaaatc tttattagct aaagatttct tactaaataa
    11701 tagtggaaat atccctaagt ccatttctca aaatgtaacc ttaatatcaa gttcatcaaa
    11761 tattcctaat gatataacaa aagatttttt attatcattg ttaaaatcaa aatttgaaaa
    11821 caatcgacaa acattcgata agatttataa catactaaac atcgaagcaa taccgtctaa
    11881 cgtactacta aaaaacttga gtgatggtca aaaacaaaag cttaaattat taagtttctt
    11941 attggaaga
//
LOCUS       DALPQQ010000076        11924 bp    DNA     linear   BCT 22-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus strain K18-6-464
            SAMD00233528-rid16434743.denovo.076, whole genome shotgun sequence.
ACCESSION   DALPQQ010000076 DALPQQ010000000
VERSION     DALPQQ010000076.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMD00233528
            Sequence Read Archive: DRR236061
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 11924)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11924)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001543423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001543423.1
            Genome Coverage       :: 77x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/22/2022 17:09:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,811
            CDSs (total)                      :: 2,743
            Genes (coding)                    :: 2,689
            CDSs (with protein)               :: 2,689
            Genes (RNA)                       :: 68
            rRNAs                             :: 2, 4, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 4, 2 (16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 54
            CDSs (without protein)            :: 54
            Pseudo Genes (ambiguous residues) :: 0 of 54
            Pseudo Genes (frameshifted)       :: 27 of 54
            Pseudo Genes (incomplete)         :: 27 of 54
            Pseudo Genes (internal stop)      :: 10 of 54
            Pseudo Genes (multiple problems)  :: 10 of 54
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11924
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMD00233528-rid16434743.denovo.076"
                     /strain="K18-6-464"
                     /db_xref="taxon:1280"
                     /geo_loc_name="Japan: Niigata"
     gene            24..1007
                     /locus_tag="O7798_001732"
     CDS             24..1007
                     /locus_tag="O7798_001732"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499888.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LCP family protein"
                     /protein_id="HDC2863991.1"
                     /translation="MDKETNDNEYRRQSEHRTSAPKRKKKKKIRKLPIILLIVVILLI
                     ALVVYIVHSYNSGVEYAKKHAKDVKVHQFNGPVKNDGKISILVLGADKAQGGQSRTDS
                     IMVVQYDFINKKMKMMSVMRDIYADIPGYGKHKINSAYALGGPELLRKTLDKNLGINP
                     EYYAVVDFTGFEKMIDELMPEGVPINVEKDMSKNIGVSLKKGNHRLNGKELLGYARFR
                     HDPEGDFGRVRRQQQVMQTLKKEMVNFRTVVKLPKVAGILRGYVNTNIPDSGIFQTGL
                     SFGIRGEKDVKSLTVPIKNSYEDVNTNTDGSALQINKNTNKQAIKDFLDED"
     gene            complement(1095..1280)
                     /locus_tag="O7798_001733"
     CDS             complement(1095..1280)
                     /locus_tag="O7798_001733"
                     /EC_number="5.3.2.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499889.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-oxalocrotonate tautomerase"
                     /protein_id="HDC2863992.1"
                     /translation="MPIVNVKLLEGRSDEQLKNLVSEVTDAVEKTTGANRQAIHVVIE
                     EMKPNHYGVAGVRKSDQ"
     gene            1428..2690
                     /locus_tag="O7798_001734"
     CDS             1428..2690
                     /locus_tag="O7798_001734"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499890.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Y-family DNA polymerase"
                     /protein_id="HDC2863993.1"
                     /translation="MYNYHLLEDRDVLCIDQKSFFASVSCIEKGLDPLETKLAVVADT
                     KRQGSVILAATPKLKELGIKTGSRLFEIPHRNDIYIINPSMRKYLNVSVAISKIALRY
                     IPPEDLHQYSIDEFFMDVTDSYHRFSSTVHAFCERLKREIYEETGIYCTVGIGSNMLL
                     SKIAMDVEAKHSQNGIAEWRYQDVPTKLWPIQPLRDFWGINRRTEAKLNKRGIFTIGD
                     LAKYPYKFLKKEFGILGVDMHLHANGIDQSKVREKHKISNPSICKSQILMRDYHFDEA
                     KVVMQELIEDVASRVRARKKVARTIHFAFGYSDEGGVHKQYTLKDPTNLEKDIYKVVM
                     HFADKLCNKQALYRTLSISLSQFINEDERQLSLFEDEYQRKRDECLAKTIDQLHLKCG
                     KGIVSKAVSFTEAGTKHGRLGLMAGHKM"
     gene            complement(2827..3918)
                     /locus_tag="O7798_001735"
     CDS             complement(2827..3918)
                     /locus_tag="O7798_001735"
                     /EC_number="1.3.1.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499891.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="prephenate dehydrogenase"
                     /protein_id="HDC2863994.1"
                     /translation="MTTVLFVGLGLIGGSLASNIKYHNPNTNIIAYDADTSQLDKAKS
                     IGIINEKCLNYSEAIKKADVIIYATPVAITNKYLSELIDMPTKPGVIVSDTGSTKAMI
                     QQHECNLLKHNIHLVSGHPMAGSYKSGVLNAKKHLFENAYYILVYNEPRNEQAANTLK
                     ELLSPTLAKFIVTTAEEHDYVTSVVSHLPHIVASSLVHVSQKNGQEHHLVNKLAAGGF
                     RDITRISSSNAQMWKDITLSNKTYILEMIRQLKSQFQDLERLIESNDSEKLLSFFAQA
                     KSYRDALPAKQLGGLNTAYDLYVDIPDESGMISKVTYILSLHNISISNLRILEVREDI
                     YGALKISFKNPTDRERGMQALSDFDCYIQ"
     gene            4083..5114
                     /locus_tag="O7798_001736"
     CDS             4083..5114
                     /locus_tag="O7798_001736"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499892.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M42 family metallopeptidase"
                     /protein_id="HDC2863995.1"
                     /translation="MEPILEMIKTLTGINSPSGDTEEAIQFVEKYAKDLGYQTTLTNK
                     GALLITVPGKNDEVQRCITAHVDTLGAMVKEIKEDGRLAIELIGGFTYNAIEGEYCQI
                     KTDAGQIYTGTICLHETSVHVYRNNHEIPRDQKHMEIRIDEVTTSEEDTKSLGISVGD
                     FVSFDRRTVITSSGFIKSRHLDDKASVAMILQLLKKLKEEQIILPHTTQFYISNNEEI
                     GYGANASIDSKIKEYIALDMGALGDGQASDEYTVSICAKDASGPYHKQLKSHLVNLCK
                     INNIPYKVDIYPYYGSDASAALHAGADIRHGLFGAGIESSHAMERTHIDSIKATEKLL
                     YAYCLSPIE"
     gene            5606..7012
                     /locus_tag="O7798_001737"
     CDS             5606..7012
                     /locus_tag="O7798_001737"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499893.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anthranilate synthase component I"
                     /protein_id="HDC2863996.1"
                     /translation="MDIFYKKIKANVTPEVLAQLHSKKIILESTNQQQTKGRYSVVIF
                     DIYGTLTLDNDVLSVSTLKESYQITERPYHYLTTKINEDYHNIQDEQLKSLPFISGYV
                     GTCSFDLVRHEFPKLQSIQLEDHKQHDVRLYMVEQVYVFDHYKDELYIIATNQFSNST
                     KSDLENRVIKSIEDLTKIQPFMPTQGFDFKTKEIQSNISEERFIEMIQYFKEKITEGD
                     MFQVVPSRIYKYAHHASQHLNQLSFQLYQNLKRQNPSPYMYYLNIDQPYIVGSSPESF
                     VSVKDQIVTTNPIAGTIQRGETTQIDNENMKQLLNDPKECSEHRMLVDLGRNDIHRVS
                     KIGTSKITKLMVIEKYEHVMHIVSEVTGKINQNLSPMTVIANLLPTGTVSGAPKLRAI
                     ERIYEQYPHKRGVYSGGVGYINCNHNLDFALAIRTMMIDEQYINVEAGCGVVYDSIPE
                     KELNETKLKAKSLLEVSP"
     gene            7009..7575
                     /locus_tag="O7798_001738"
     CDS             7009..7575
                     /locus_tag="O7798_001738"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499894.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminodeoxychorismate/anthranilate synthase
                     component II"
                     /protein_id="HDC2863997.1"
                     /translation="MILVVDNYDSFTYNLVDIVAQHTDVIVQYPDDDNVLNQSVDAVI
                     ISPGPGHPLDDQQLMKIISTYQHKPILGICLGAQALTCYYGGEVIKGDKVMHGKVDTL
                     KVISHHQHLLYQDIPEQFSIMRYHSLISNPDNFPEELKITGRTKDCIQSFEHKERPHY
                     GIQYHPESFATDYGVKIITNFINLVKEG"
     gene            7581..8579
                     /gene="trpD"
                     /locus_tag="O7798_001739"
     CDS             7581..8579
                     /gene="trpD"
                     /locus_tag="O7798_001739"
                     /EC_number="2.4.2.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499895.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anthranilate phosphoribosyltransferase"
                     /protein_id="HDC2863998.1"
                     /translation="MTLLTRIKTETILLESDIKELIDILISPSIGTDIKYELLSSYSE
                     REIQQQELTYIVRSLINTMYPHQPCYEGAMCVCGTGGDKSNSFNISTTVAFVVASAGV
                     KVIKHGNKSITSNSGSTDLLNQMNIQTTTVDDTPNQLNEKDLVFIGATESYPIMKYMQ
                     PVRKMIGKPTILNLVGPLINPYHLTYQMVGVFDPTKLKLVAKTIKDLGRKRAIVLHGA
                     NGMDEATLSGDNLIYELTEDGEIKNYTLNATDYGLKHAPNSDFKGGSPEENLAISLNI
                     LNGKDQSSRRDVVLLNAGLSLYVAEKVDTIAEGIELATTLIDNGEALEKYHQMRGE"
     gene            8581..9363
                     /gene="trpC"
                     /locus_tag="O7798_001740"
     CDS             8581..9363
                     /gene="trpC"
                     /locus_tag="O7798_001740"
                     /EC_number="4.1.1.48"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499896.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="indole-3-glycerol phosphate synthase TrpC"
                     /protein_id="HDC2863999.1"
                     /translation="MTILSEIVKYKQSLLQNGYYQDKLNTLKSVKIQNKKSFINAIEK
                     EPKLAIIAEIKSKSPTVNDLPERDLSQQISDYDQYGANAVSILTDEKYFGGSFERLQA
                     LTTKTTLPVLCKDFIIDPLQIDVAKQAGASMILLIVNILSDKQLKDLYNYAISQNLEV
                     LVEVHDRHELERAYKVNAKLIGVNNRDLKRFVTNVEHTNTILENKKTNHYYISESGIH
                     DASDVRKILHSGIDGLLIGEALMRCDNLSEFLPQLKMQKVKS"
     gene            9363..9995
                     /locus_tag="O7798_001741"
     CDS             9363..9995
                     /locus_tag="O7798_001741"
                     /EC_number="5.3.1.24"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499897.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylanthranilate isomerase"
                     /protein_id="HDC2864000.1"
                     /translation="MKLKFCGFTSIKDVTAASQLPIDAIGFIHYEKSKRHQTITQIKK
                     LASAVPNHIDKVCVMVNPDLTTIEHVLSNTSINTIQLHGTESIDFIQEIKKKYSSIKI
                     TKALAADENIIQNINKYKGFVDLFIIDTPSVSYGGTGQTYDWTILKHIKDIPYLIAGG
                     INSENIQTVNQLKLSHQGYDLASGIEVNGRKDIEKMTAIVNIVKGDRDNE"
     gene            9988..11202
                     /gene="trpB"
                     /locus_tag="O7798_001742"
     CDS             9988..11202
                     /gene="trpB"
                     /locus_tag="O7798_001742"
                     /EC_number="4.2.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499898.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tryptophan synthase subunit beta"
                     /protein_id="HDC2864001.1"
                     /translation="MNKQIQTEADELGFFGEYGGQYVPETLMPAIIELKKAYKEAKAD
                     PEFQRELEYYLSEYVGRATPLTYAASYTESLGGAKIYLKREDLNHTGAHKINNALGQA
                     LLAKRMGKKKLVAETGAGQHGVASATVAALFDMELVVFMGSEDIKRQQLNVFRMELLG
                     AKVVAVEDGQGTLSDAVNKALQYWVSHVDDTHYLLGSALGPDPFPTIVRDFQSVIGKE
                     IKSQILKKEGRLPDAIVACIGGGSNAIGTFYPFIKDDVALYGVEAAGQGDDTDKHALA
                     IGKGSPGVLHGTKMYLIQDEDGQVQLAHSISAGLDYPGIGPEHSYYHDIGRVTFENAS
                     DTQAMNALINFTKHEGIIPAIESAHALSYVERLAPTMSKEDIIVVTISGRGDKDMETI
                     RQYMVERGLAND"
     gene            11195..11923
                     /locus_tag="O7798_001743"
     CDS             11195..11923
                     /locus_tag="O7798_001743"
                     /EC_number="4.2.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499899.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tryptophan synthase subunit alpha"
                     /protein_id="HDC2864002.1"
                     /translation="MTKLFIPYIMGNKDLIENATLLSENGADIIEIGVPFSDPVADGP
                     VIMEAGQQAIKQGITIDYIFNQLEKHGDQIKCNYVLMTYYNIICHYGEQAFFEKCRDT
                     GVYGLIIPDLPYELSQRLKQQFSHYGVKIISLVVMTTDDKRIKDIVSHAEGFIYTVTM
                     NATTGQNGAFHPELKRKIESIKAIANVPVVAGFGIRTPQHVADIKEVADGIVIGSEIV
                     KRFKSNTREEIIKYLQSIQQTLNN"
BASE COUNT         4333 a         1761 c         2228 g         3602 t
ORIGIN      
        1 ttgaagatat aaggtaggta aatatggata aagaaactaa tgacaacgaa tatagacgtc
       61 aaagtgaaca tcgcacttcg gcgcctaagc gaaaaaagaa gaagaaaatt aggaaattac
      121 ctatcattct tctgattgtt gtaattttac ttatcgcatt agttgtatat attgtacata
      181 gttacaatag cggtgtagaa tatgccaaga aacatgcgaa agatgttaaa gtacatcaat
      241 ttaatggacc agtaaaaaat gatggtaaaa tttctattct tgtactcggt gcagataaag
      301 cacaaggtgg acaatcaaga acagattcta tcatggttgt tcaatatgac tttatcaata
      361 aaaagatgaa aatgatgtct gtcatgcgtg atatttatgc agatattcca ggatatggaa
      421 aacacaaaat taattcagca tacgctttag gtggtccaga gctacttaga aaaacacttg
      481 ataaaaattt aggaattaat cctgaatatt atgcagtagt tgattttact ggatttgaga
      541 aaatgattga tgaattaatg cctgaaggtg taccaattaa tgtcgaaaaa gatatgtcga
      601 aaaatattgg tgtatctttg aaaaagggta accataggtt gaatggtaaa gaattacttg
      661 gttatgcaag attccgtcac gaccctgaag gtgacttcgg acgcgtgcga cgtcagcaac
      721 aagtgatgca aacattgaaa aaagaaatgg ttaattttag aacagttgtt aaattaccaa
      781 aagttgcagg tattttaaga ggctatgtga atacaaacat tcctgattca gggattttcc
      841 aaacaggttt gagttttggt atccgaggtg aaaaagatgt taagtcattg actgtgccaa
      901 tcaagaactc atacgaagat gtcaatacaa atactgatgg tagtgcatta cagattaata
      961 aaaacacaaa taaacaagct attaaagact ttttagatga agattaaaaa taaacaaggc
     1021 gatttctatc atactcagat agaagtcgcc ttgttcgttt tcaaagaatt aattggcatg
     1081 catcttatga agaattattg atctgacttt cttacgccag ccacaccata atggtttggt
     1141 ttcatttctt ctataacaac gtgaattgct tgtctatttg cccccgttgt tttttctacg
     1201 gcgtcagtta cttcgctaac taaatttttt aattgttcat ccgaacgacc ttctaataat
     1261 tttacattga cgattggcat catccaaacc tcctaatcat tattaatttg agtatatcat
     1321 gtaatactta aaaattcatt tgcaaaataa cagaacattt gttctaaaat agttgaaata
     1381 gaacacgtgt tcgtatataa taagattcaa gtaagggagg aataacagtg tataattatc
     1441 atttattaga agatagggat gttctatgta ttgaccaaaa aagttttttt gcgagtgttt
     1501 cttgtattga aaaggggcta gatccattag aaacaaagct agctgttgtt gcagatacta
     1561 agcgtcaggg ttctgtaata ttggctgcga cacctaaatt aaaagaatta ggcatcaaga
     1621 cagggtcgcg attgtttgaa ataccacata gaaatgatat ttacattatc aatccaagta
     1681 tgcgtaaata tcttaatgtt tcagttgcta tttctaagat tgcattgcgt tatattccac
     1741 ctgaagattt acaccaatat agtattgacg aattttttat ggatgttact gatagctatc
     1801 atagatttag ttctacagta catgcatttt gcgaaagact taaacgtgaa atttatgaag
     1861 aaacaggcat ttattgtact gtgggcattg gttctaatat gttattaagt aaaattgcta
     1921 tggatgttga agcgaagcat agtcaaaatg gtatagctga atggcgatat caagatgtac
     1981 caacgaaatt atggccaatt cagcccttgc gagatttttg gggtattaat cgtcgaacag
     2041 aagccaaatt gaataaaaga ggaattttta ctataggaga tttagcgaaa tatccatata
     2101 aatttttaaa aaaagagttc ggtattttag gtgttgatat gcatctacat gcgaatggga
     2161 tagatcagag taaagtacgt gaaaagcaca agatcagcaa tccatcgata tgcaaaagtc
     2221 aaatattaat gagagattat cattttgatg aagcaaaagt agtaatgcaa gagttaattg
     2281 aagatgttgc tagcagagtt cgagcaagaa aaaaagtggc aagaacgata cattttgcct
     2341 ttggctatag tgatgaaggc ggtgtacata agcaatatac tttgaaagat ccaacaaact
     2401 tagaaaaaga tatttataaa gtagtaatgc atttcgcaga taaattatgt aataaacaag
     2461 cactatatcg tacgctaagt atatctttga gtcaatttat taatgaggat gagcgacagt
     2521 taagtctgtt tgaagatgaa taccaacgca aacgtgacga atgtctagct aaaacgatag
     2581 accaattaca tttgaaatgc ggcaaaggta ttgtgtccaa agcagtatcg tttacagaag
     2641 caggtacaaa acacggcaga ttaggtttaa tggctggaca taaaatgtaa tgactatacg
     2701 gtttaagtaa tatataactg tgattcgtat aaaataagtc tctaaagata aatatttcat
     2761 atatcacaat agattttcac aataatatct aagaatacat ggaatttatc aaaagagact
     2821 taataattat tggatataac aatcaaaatc actcaatgct tgcataccgc gttctcggtc
     2881 agtagggttt ttgaaactaa tttttaaagc accgtatata tcttcgcgta cttctaagat
     2941 tcttaagttg cttatagata tgttatgtaa actcaggata taagtcactt tacttatcat
     3001 acctgattca tccggaatgt ctacatatag atcatacgca gtatttagtc cacctagttg
     3061 tttagcgggt agtgcgtcgc gatacgattt agcttgggca aaaaatgata acaatttttc
     3121 agaatcattg ctttcaatta gtctttctaa atcttgaaac tgacttttta gctgtcgaat
     3181 catttctaaa atatacgttt tattactcaa ggtgatatct ttccacattt gtgcattact
     3241 actagatata cgagtgatat cacgaaaacc accagctgca agtttattaa ctaaatgatg
     3301 ttcttgaccg ttcttttgac taacatgaac taaactagat gcaacgatat gaggtaaatg
     3361 acttacgacg cttgttacgt agtcgtgttc ttcagcagta gttacaataa atttagcaag
     3421 agtaggtgat aacagttctt ttaacgtgtt tgctgcttgc tcatttcttg gctcattgta
     3481 gactaaaata taataagcgt tttcaaataa gtgcttttta gcatttagta caccagattt
     3541 ataactacca gccattggat gaccactgac taaatgaata ttatgcttta ataaattgca
     3601 ttcgtgttgc tgtatcattg ctttagtact accagtatca gaaacaataa caccaggttt
     3661 agttggcata tctataagct cgctaagata tttatttgtg atagcaacag gtgttgcata
     3721 aataattaca tcggcttttt taatagcttc actataattt aaacattttt cattaataat
     3781 gccgattgat ttagctttat ctaactgaga agtatctgca tcgtatgcaa taatattagt
     3841 attagggtta tggtatttta tattgctagc aagacttcca ccaattaatc caagcccaac
     3901 aaataaaact gttgtcatat aaatcacctt atttcgaaat tttcagaata ataacattgt
     3961 aaatgagctg ttgacacagt gcaatagtaa ataaaaatcg ataatagcat taatagataa
     4021 acggagataa atcatctaca ataaagagta tagtaacaca atggcaacgg aggggtaaat
     4081 caatggaacc aatattagaa atgattaaaa cattaacagg tattaatagt ccttcaggag
     4141 acacagaaga agcaattcaa tttgtcgaaa aatatgcaaa agacttgggt tatcaaacaa
     4201 cactaacaaa taaaggtgcg ttattaataa cagtgccagg caaaaatgat gaagtacaac
     4261 gctgtattac tgctcatgtt gatactttag gtgcaatggt taaagaaatt aaagaagatg
     4321 gtcgcttagc aatagaatta attggaggat tcacgtataa cgcgattgag ggtgaatatt
     4381 gccaaattaa aactgatgct ggtcaaatat atacaggaac aatttgtctg catgaaacaa
     4441 gtgttcatgt atatagaaat aatcatgaaa tacctagaga tcaaaagcat atggaaataa
     4501 gaattgatga agtaactaca tcagaagaag atacaaagag tttaggtatt tcagtaggtg
     4561 attttgttag ctttgatcga cgtacagtta tcacgtcatc aggttttatt aaatctcgtc
     4621 atttagatga taaagctagc gtagcgatga tactacaatt actaaagaaa ttaaaagaag
     4681 agcaaataat attaccacat acaacgcaat tttatatttc taataacgaa gaaataggtt
     4741 acggtgcaaa tgcatcaatt gattcgaaaa tcaaagaata tattgcatta gatatgggcg
     4801 cgttgggaga cggtcaagca tcggatgaat atacagtttc tatttgtgcc aaagatgctt
     4861 caggtccata tcataagcaa ttgaaatcgc acctagttaa tctttgcaaa ataaataaca
     4921 ttccatataa agtagacata tatccatatt atggttcaga tgcttcagca gctttacatg
     4981 ctggtgcgga tatcagacat ggtttatttg gcgctggcat tgaatcatct catgcaatgg
     5041 aacgaacaca tattgattct attaaagcga cagagaaatt actatatgca tattgcttat
     5101 caccaattga gtaaacaatt agtgttgaca aatgtgaacg acctatgtaa tataatgaac
     5161 tataaaaata attagaattt tctaaagaaa tagtagcaga tatgaaacgt agcaaataga
     5221 aagctaatgg gtgatgggaa ttagcacgcc atatcttgtg aattggactt tggaaaacaa
     5281 ttgaatgagt tttgaaagtg aacatgaatt atgttaacta aggtggcacc acggtaacgc
     5341 gtccttacag gtatatgcgt tatgtggtgt ctttttattt agacaaaatg tagtagttaa
     5401 ttaaaggtag caacagaaag ttagtggatg atgtgaacta acaccgagat taatgaaatt
     5461 gggttttgtc tgcaacagaa aaattatata tagtaaagag tgaactatga atatttcgaa
     5521 tattcggtta atttaggtgg taccacgcgt cagcgtcctt tatattgata aggatgctgg
     5581 cgcttttttg aaaggagcgt atagaatgga tatattttat aaaaaaataa aagcaaatgt
     5641 aacgcccgaa gttttagcac aacttcattc caagaagatc attttggaaa gtacaaatca
     5701 acaacaaact aaaggtcgct attcagttgt tatttttgat atttatggca ctttaacttt
     5761 agataatgat gtattatcag taagtacttt aaaagaatcg tatcaaatca ctgaaagacc
     5821 gtaccattat ttaacgacta aaataaatga agactaccat aatattcaag atgagcaact
     5881 taagtcatta ccatttatat ctggatatgt tgggacgtgt agctttgatt tagtaagaca
     5941 tgaatttcct aaattgcaat caatacaatt agaagatcac aagcagcacg atgtaaggtt
     6001 atatatggtt gaacaagttt atgtatttga ccattacaaa gatgagttat atatcatcgc
     6061 gacgaatcaa ttttcaaatt caacaaaatc agatcttgag aatcgagtta ttaagtctat
     6121 cgaagactta actaaaatcc aaccattcat gcctacacaa ggttttgatt ttaaaactaa
     6181 agaaattcaa tcaaacattt ctgaagaaag atttatcgaa atgattcagt atttcaaaga
     6241 gaaaataaca gaaggggata tgttccaagt tgtgccatca agaatttaca aatatgcgca
     6301 tcatgctagt cagcatttaa atcaactttc gtttcaactg tatcaaaatt taaaacgaca
     6361 aaacccaagt ccatatatgt attatcttaa tatcgatcaa ccatatattg tcggtagttc
     6421 tcccgaaagt ttcgtaagtg tcaaagatca aattgtaaca actaatccta ttgcaggtac
     6481 gattcaacgt ggtgagacga cacaaataga taatgagaat atgaaacaac tacttaatga
     6541 tccaaaagaa tgcagcgaac atcgtatgct agttgattta ggacgtaatg atattcatag
     6601 agtaagtaaa atcggtacct caaaaattac taaattaatg gttattgaaa aatatgaaca
     6661 tgttatgcat atcgtaagtg aagtcacagg taaaataaat caaaatttat cgccaatgac
     6721 agttattgcg aatttattac caacaggtac cgtttcaggt gcaccaaaat tacgtgcaat
     6781 tgaaagaata tatgaacaat atccacataa acggggcgtt tatagtggtg gtgttggata
     6841 cataaattgt aatcataact tagattttgc attagcaatt cgaacgatga tgatagatga
     6901 gcagtatatc aacgtagaag ctggttgtgg cgttgtatat gattctattc ctgaaaaaga
     6961 actgaatgaa acgaaattga aagctaaaag cttattggag gtgagcccat gatcttagtt
     7021 gtagataatt atgattcctt tacatataac ctagtggata ttgttgctca acatactgac
     7081 gtcattgttc aataccctga tgatgataat gtgctgaatc aatcggtgga cgctgttatt
     7141 atatctcctg gtccagggca tccattagac gatcaacagt taatgaaaat catatcaacc
     7201 tatcaacaca aacccatttt aggtatttgt ttaggggctc aggcactgac ttgttactac
     7261 ggtggagaag tcattaaagg cgacaaggtt atgcacggca aagttgatac actaaaggtt
     7321 atatcgcatc atcaacatct gttatatcaa gatataccag aacagttttc aattatgaga
     7381 tatcattcat taataagtaa ccctgacaat tttccagaag aattgaaaat tactggacgt
     7441 accaaagatt gtatacagtc attcgagcat aaagaaagac cgcattatgg tattcagtac
     7501 catcctgaat catttgctac agactatggt gtcaaaataa ttacaaattt cattaatcta
     7561 gtgaaggaag gatgaaaacc atgacattac taacaagaat aaaaactgaa actatattac
     7621 ttgaaagcga cattaaagag ctaatcgata tacttatttc tcctagtatt ggaactgata
     7681 ttaaatatga attacttagt tcctattcgg agcgagaaat ccaacaacaa gaattaacat
     7741 atattgtacg tagcttaatt aatacaatgt atccacatca accatgttat gaaggggcta
     7801 tgtgtgtgtg cggcacaggt ggtgacaagt caaatagttt caacatttca acgactgttg
     7861 cttttgttgt agcaagtgct ggcgtaaaag ttataaaaca tggtaataaa agtattacct
     7921 caaattcagg tagtacggat ttgttaaatc aaatgaacat acaaacaaca actgttgatg
     7981 atacacctaa ccaattaaat gaaaaagacc ttgtattcat tggtgcaact gaatcatatc
     8041 caatcatgaa gtatatgcaa ccagttagaa aaatgattgg aaagcctaca atattaaacc
     8101 ttgtgggtcc attaattaat ccatatcact taacgtatca aatggtaggc gtctttgatc
     8161 ctacaaagtt aaagttagtt gctaaaacga ttaaagattt aggtagaaaa cgtgcaatcg
     8221 ttttacatgg tgcaaatggt atggatgaag caacactatc tggtgataat ttgatatatg
     8281 aattgactga agatggagaa atcaaaaatt acacattaaa tgcgactgat tatggtttga
     8341 aacatgcgcc gaatagtgat tttaaaggcg gttcacctga agaaaattta gcaatctccc
     8401 ttaatatctt gaatggtaaa gatcagtcaa gtcgacgtga tgttgtctta ctaaatgcgg
     8461 gtttaagcct ttatgttgca gagaaagtgg ataccatcgc agaaggcata gaacttgcaa
     8521 ctacattgat tgataatggt gaagcattgg aaaaatacca tcaaatgaga ggtgaataat
     8581 atgacgattt tatcagaaat tgttaaatat aaacagtcac ttttacaaaa tggctattat
     8641 caagacaaac ttaatacctt gaaaagtgtg aagattcaga ataaaaaatc ttttataaac
     8701 gcaattgaga aagaaccaaa gctagcaatt attgcagaaa ttaaatcgaa gagtcctaca
     8761 gttaatgact tacctgaacg agatttatcg caacaaatct cagattatga ccaatatggt
     8821 gcaaatgccg tgtccatttt aactgatgaa aagtactttg gtggtagttt tgaaagatta
     8881 caagcattga cgacaaaaac aacattaccc gtattatgca aagactttat tatagacccg
     8941 cttcaaattg atgttgctaa acaagctggt gcatctatga ttttattgat cgttaacatc
     9001 ttatctgata aacaattgaa agatttatat aactacgcta tatcgcaaaa tctagaagtg
     9061 ttagttgaag tacatgatcg ccatgaatta gaacgtgcct ataaggttaa tgctaaattg
     9121 attggtgtaa ataacaggga cttaaaacga tttgttacaa atgtggaaca tacaaatact
     9181 attttagaaa ataaaaaaac aaatcattat tatatttctg aaagtggtat tcacgatgca
     9241 tctgatgtaa gaaaaatctt gcatagtggt atcgatggct tactaatagg tgaggcgctt
     9301 atgcgttgtg acaatctatc tgaattttta ccacaactga aaatgcaaaa ggtgaagtca
     9361 tgatgaaatt gaaattttgt ggctttacat caataaagga tgttacagcg gccagtcaat
     9421 tacctattga tgcgataggt ttcatccatt atgaaaaaag taaaaggcat caaacaatta
     9481 cccaaataaa aaagttagcg tctgctgttc caaatcatat cgataaagta tgtgtcatgg
     9541 taaatcctga tttaacaaca attgaacacg tattaagcaa tacgtcaatt aacacaatac
     9601 agttacacgg cacagaatct attgatttta tacaggaaat taaaaagaaa tattcaagca
     9661 ttaaaatcac taaagcttta gctgcagatg aaaacataat ccaaaacata aataaatata
     9721 aagggttcgt agatttattt attatcgaca caccctcagt gtcgtatggt ggtaccggtc
     9781 aaacatatga ctggactatt ttgaagcaca taaaagacat accttatttg atagcaggag
     9841 gcattaactc tgaaaatatt caaacagtta atcaacttaa attatcacat caaggttatg
     9901 atcttgcatc aggtatagaa gtaaatgggc gaaaagatat agaaaaaatg acagcaattg
     9961 taaatattgt gaaaggagat agagacaatg aataaacaaa tacaaacaga agcagatgaa
    10021 ttaggtttct ttggtgaata tggagggcaa tatgttccag aaacattaat gccagcaatt
    10081 attgagttga aaaaagctta taaagaggca aaagcagacc cagagtttca aagagaactg
    10141 gaatactatt tatcagagta tgtaggacgc gcgacaccac ttacatatgc tgcatcatat
    10201 actgaaagcc taggtggcgc taaaatatat ttgaaacgag aggatctaaa tcatacaggc
    10261 gcccataaaa ttaataatgc gttaggtcaa gcgttgcttg ctaaaagaat gggcaagaag
    10321 aagcttgttg ctgaaactgg tgcgggtcaa catggtgtag ctagtgctac ggttgctgca
    10381 ttatttgata tggaacttgt tgtctttatg ggaagtgaag atattaaaag acaacaactt
    10441 aatgtattta gaatggaatt acttggtgca aaggttgtgg cagttgaaga tggtcaaggg
    10501 actttatcgg atgcagttaa taaagcattg caatattggg taagtcatgt agatgataca
    10561 cattatttat taggttctgc attaggtcca gacccgttcc caacgattgt tagagatttt
    10621 cagagtgtga ttggtaaaga aataaaatca cagatattga agaaagaagg tcgacttccg
    10681 gatgcaattg tagcatgtat cggtggtggc tcaaatgcaa tcggtacatt ttatccattt
    10741 attaaagatg atgttgcatt atacggtgtt gaagccgcag gtcaaggcga tgatactgat
    10801 aaacatgcac ttgcaattgg caaaggatca cctggcgtat tacatggtac taaaatgtat
    10861 ttaattcaag atgaagatgg gcaagtgcaa ctagcacatt ctatttcagc aggacttgat
    10921 tatcctggta ttggaccaga acattcttat taccacgaca ttggtagagt aacttttgaa
    10981 aatgctagtg atacacaagc aatgaatgct ttaatcaact ttacaaaaca tgaaggtatt
    11041 atacctgcaa ttgaaagtgc acatgcactg agttatgttg aaagactagc gcctacgatg
    11101 tcgaaagaag atattattgt agtaactatt tctggacgtg gcgataaaga tatggaaaca
    11161 attagacaat atatggtaga gcgaggtctt gcaaatgact aaattattta taccttatat
    11221 tatgggcaat aaagatttga ttgaaaatgc aacattgttg agtgaaaatg gtgcagatat
    11281 aattgaaatt ggagtacctt tctctgatcc ggttgctgat ggtccagtta tcatggaagc
    11341 aggtcaacaa gcgattaaac aaggcatcac gatagattat attttcaatc aattagaaaa
    11401 acatggtgat caaattaagt gtaactatgt attaatgacg tattataata ttatttgtca
    11461 ttatggagaa caagcgtttt ttgaaaaatg tcgagatact ggtgtctacg gcttaattat
    11521 tcctgattta ccatatgaat tatcgcagcg tttaaaacaa caatttagtc actatggcgt
    11581 caaaatcata tcgttagttg tgatgactac tgatgacaaa cgtataaaag atatcgtatc
    11641 ccatgcggaa ggctttattt atactgtgac gatgaatgcg acaacagggc aaaacggtgc
    11701 gtttcatcca gaattaaaac gaaaaattga gtcaattaaa gcgatagcca atgtgccagt
    11761 tgtcgcagga tttggtataa gaacaccaca acatgttgca gatataaaag aggttgcaga
    11821 tggcattgtc attggtagcg aaatcgttaa gcgatttaaa tctaacacgc gtgaggaaat
    11881 cattaaatat ttacaatcta tccaacaaac attgaataat taag
//
LOCUS       DALPQQ010000077        11911 bp    DNA     linear   BCT 22-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus strain K18-6-464
            SAMD00233528-rid16434743.denovo.077, whole genome shotgun sequence.
ACCESSION   DALPQQ010000077 DALPQQ010000000
VERSION     DALPQQ010000077.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMD00233528
            Sequence Read Archive: DRR236061
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 11911)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11911)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001543423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001543423.1
            Genome Coverage       :: 77x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/22/2022 17:09:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,811
            CDSs (total)                      :: 2,743
            Genes (coding)                    :: 2,689
            CDSs (with protein)               :: 2,689
            Genes (RNA)                       :: 68
            rRNAs                             :: 2, 4, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 4, 2 (16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 54
            CDSs (without protein)            :: 54
            Pseudo Genes (ambiguous residues) :: 0 of 54
            Pseudo Genes (frameshifted)       :: 27 of 54
            Pseudo Genes (incomplete)         :: 27 of 54
            Pseudo Genes (internal stop)      :: 10 of 54
            Pseudo Genes (multiple problems)  :: 10 of 54
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11911
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMD00233528-rid16434743.denovo.077"
                     /strain="K18-6-464"
                     /db_xref="taxon:1280"
                     /geo_loc_name="Japan: Niigata"
     gene            70..1407
                     /locus_tag="O7798_001744"
     CDS             70..1407
                     /locus_tag="O7798_001744"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499029.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class V-fold PLP-dependent
                     enzyme"
                     /protein_id="HDC2864003.1"
                     /translation="MKQPILNKLESLNQEEAISLHVPGHKNMTIGHLSQLSMTMDKTE
                     IPGLDDLHHPEEVILESMKQVEKHSDYDAYFLVNGTTSGILSVIQSFSQKKGDILMAR
                     NVHKSVLHALDISQQEGHFIETHQSPLTNHYNKVNLSRLNNDGHKLAVLTYPNYYGET
                     FNVEEVIKSLHQLNIPVLIDEAHGAHFGLQGFPDSTLNYQADYVVQSFHKTLPALTMG
                     SVLYIHKNAPYRETIIEYLSYFQTSSPSYLIMASLESAAEFYKTYDSTVFFDKRAQLI
                     ECLEKKGFEMLQVDDPLKLLIKYEGFTGHDIQNWFMNAHIYLELADDYQALAILPLWH
                     HDDTYLFDSLLRKIEDMILPKKSVSKVKQTQLLTTEGNYKPKRFEYVTWCDLKKAKGK
                     VLARHIVPYPPGIPIIFKGETITENMIELVNEYLETGMIVEGIKNNKILVEDE"
     gene            1409..2026
                     /locus_tag="O7798_001745"
     CDS             1409..2026
                     /locus_tag="O7798_001745"
                     /EC_number="2.7.4.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499030.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dTMP kinase"
                     /protein_id="HDC2864004.1"
                     /translation="MSAFITFEGPEGSGKTTVINEVYHRLVKDYDVIMTREPGGVPTG
                     EEIRKIVLEGNDMDIRTEAMLFAASRREHLVLKVIPALKEGKVVLCDRYIDSSLAYQG
                     YARGIGVEEVRALNEFAINGLYPDLTIYLNVSAEVGRERIIKNSRDQNRLDQEDLKFH
                     EKVIEGYQEIIHNESQRFKSVNADQPLENVVEDTYQTIIKYLEKI"
     gene            2054..2383
                     /locus_tag="O7798_001746"
     CDS             2054..2383
                     /locus_tag="O7798_001746"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019467733.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cyclic-di-AMP receptor"
                     /protein_id="HDC2864005.1"
                     /translation="MKMIIAIVQDQDSQELADQLVKNNFRATKLATTGGFLRAGNTTF
                     LCGVNDDRVDEILSVINQTCGNREQLVSPITPMGGSADSYIPYPVEVEVGGATVFVMP
                     VDAFHQF"
     gene            2597..3523
                     /locus_tag="O7798_001747"
     CDS             2597..3523
                     /locus_tag="O7798_001747"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000344319.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit delta'"
                     /protein_id="HDC2864006.1"
                     /translation="MDEQQQLTNAYHSNKLSHAYLFEGDDAQTMKQVAINFAKLILCQ
                     TDSQCETKVSTYNHPDFMYISTTENAIKKEQVEQLVRHMNQLPIESTNKVYIIEDFEK
                     LTVQGENSILKFLEEPPDNTIAILLSTKPEQILDTIHSRCQHVYFKPIDKEKFINRLV
                     EQNMSKPVAEMISTYTTQIDNAMALNEEFDLLALRKSVIRWCELLLTNKPMALIGIID
                     LLKQAKNKKLQSLTIAAVNGFFEDIIHTKVNVEDKQIYSDLKNDIDQYAQKLSFNQLI
                     LMFDQLTEAHKKLNQNVNPTLVFEQIVIKGVS"
     gene            3524..4327
                     /locus_tag="O7798_001748"
     CDS             3524..4327
                     /locus_tag="O7798_001748"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499034.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="stage 0 sporulation family protein"
                     /protein_id="HDC2864007.1"
                     /translation="MPNVIGVQFQKAGKLEYYTPNDIQVDIEDWVVVESKRGIEIGIV
                     KNPLMDIAEEDVVLPLKNIIRIADDKDIDKFNCNERDAENALILCKDIVREQGLDMRL
                     VNCEYTLDKSKVIFNFTADDRIDFRKLVKILAQHLKTRIELRQIGVRDEAKLLGGIGP
                     CGRSLCCSTFLGDFEPVSIKMAKDQNLSLNPTKISGACGRLMCCLKYENDYYEEVRAQ
                     LPDIGEAIETPDGNGKVVALNILDISMQVKLEGHEQPLEYKLEEIETMH"
     gene            4344..4691
                     /gene="yabA"
                     /locus_tag="O7798_001749"
     CDS             4344..4691
                     /gene="yabA"
                     /locus_tag="O7798_001749"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499035.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA replication initiation control protein YabA"
                     /protein_id="HDC2864008.1"
                     /translation="MDRNEIFEKIMRLEMNVNQLSKETSELKALAVELVEENVALQLE
                     NDNLKKVLGNDEPTTIDTANSKPAKAVKKPLPSKDNLAILYGEGFHICKGELFGKHRH
                     GEDCLFCLEVLSD"
     gene            4965..5690
                     /locus_tag="O7798_001750"
     CDS             4965..5690
                     /locus_tag="O7798_001750"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499036.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA1(Val) (adenine(37)-N6)-methyltransferase"
                     /protein_id="HDC2864009.1"
                     /translation="MLKENERFDQLIKEDFSIIQNDDVFSFSTDALLLGHFTKPRTKD
                     IVLDLCSGNGVIPLLLFAKHPRHIEGVEIQKTLVDMARRTFQFNDVDEYLTMHHMDLK
                     NVTKVFKPSQYTLVTCNPPYFKENQQHQHQKEAHKIARHEIMCTLEDCMIAARHLLKE
                     GGRLNMVHRAERLMDVLFEMRKVNIEPKKVVFIYSKVGKSAQTIVVEGRKGGNQGLEI
                     MPPFYIYNEDGNYSEEMKEVYYG"
     gene            5683..5931
                     /locus_tag="O7798_001751"
     CDS             5683..5931
                     /locus_tag="O7798_001751"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499037.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GIY-YIG nuclease family protein"
                     /protein_id="HDC2864010.1"
                     /translation="MDSHFVYIVKCSDGSLYTGYAKDVNARVEKHNRGQGAKYTKVRR
                     PVHLVYQEMYETKSEALKREYEIKTYTRQKKLRLIKER"
     gene            5933..6772
                     /gene="rsmI"
                     /locus_tag="O7798_001752"
     CDS             5933..6772
                     /gene="rsmI"
                     /locus_tag="O7798_001752"
                     /EC_number="2.1.1.198"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499038.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA
                     (cytidine(1402)-2'-O)-methyltransferase"
                     /protein_id="HDC2864011.1"
                     /translation="MAVLYLVGTPIGNLADITYRAVDVLKRVDMIACEDTRVTSKLCN
                     HYDIPTPLKSYHEHNKDKQTAFIIEQLELGLDVALVSDAGLPLISDPGYELVVAAREA
                     NIKVETVPGPNAGLTALMASGLPSYVYTFLGFLPRKEKEKSAVLEQRMHENSTLIIYE
                     SPHRVTDTLKTIAKIDATRQVSLGRELTKKFEQIVTDDVTQLQALIQQGDVPLKGEFV
                     ILIEGAKANNEISWFDDLSINEHVDHYIQTSQMKPKQAIKKVAEERQLKTNEVYNIYH
                     QIS"
     gene            7057..9030
                     /gene="metG"
                     /locus_tag="O7798_001753"
     CDS             7057..9030
                     /gene="metG"
                     /locus_tag="O7798_001753"
                     /EC_number="6.1.1.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499040.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methionine--tRNA ligase"
                     /protein_id="HDC2864012.1"
                     /translation="MAKETFYITTPIYYPSGNLHIGHAYSTVAGDVIARYKRMQGYDV
                     RYLTGTDEHGQKIQEKAQKAGKTEIEYLDEMIAGIKQLWAKLEILNDDFIRTTEERHK
                     HVVEQVFERLLKQGDIYLGEYEGWYSVPDETYYTESQLVDPQYENGKIIGGKSPDSGH
                     EVELVKEESYFFNISKYTDRLLEFYDQNPDFIQPPSRKNEMINNFIKPGLADLAVSRT
                     SFNWGVHVPSNPKHVVYVWIDALVNYISALGYLSDDESLFNKYWPADIHLMAKEIVRF
                     HSIIWPILLMALDLPLPKKVFAHGWILMKDGKMSKSKGNVVDPNILIDRYGLDATRYY
                     LMRELPFGSDGVFTPEAFVERTNFDLANDLGNLVNRTISMVNKYFDGELPAYQGPLHE
                     LDEEMEAMALETVKSYTESMESLQFSVALSTVWKFISRTNKYIDETTPWVLAKDDSQK
                     DMLGNVMAHLVENIRYAAVLLRPFLTHAPKEIFEQLNINNPQFMEFSSLEQYGVLNES
                     IMVTGQPKPIFPRLDSEAEIAYIKESMQPPATKEEKEEIPSKPQIDIKDFDKVEIKAA
                     TIIDAEHVKKSDKLLKIQVDLDSEQRQIVSGIAKFYTPDDIIGKKVAVVTNLKPAKLM
                     GQKSEGMILSAEKDGVLTLVSLPSAIPNGAVIK"
     gene            9061..9834
                     /locus_tag="O7798_001754"
     CDS             9061..9834
                     /locus_tag="O7798_001754"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499041.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TatD family hydrolase"
                     /protein_id="HDC2864013.1"
                     /translation="MLIDTHVHLNDEQYDDDLSEVITRAREAGVDRMFVVGFNKSTIE
                     RAMKLIDEYDFLYGIIGWHPVDAIDFTEEHLEWIESLAQHPKVIGIGEMGLDYHWDKS
                     PADVQKEVFRKQIALAKRLKLPIIIHNREATQDCIDILLEEHAEEVGGIMHSFSGSPE
                     IADIVTNKLNFYISLGGPVTFKNAKQPKEVAKHVSMERLLVETDAPYLSPHPYRGKRN
                     EPARVTLVAEQIAELKGLSYEEVCEQTTKNAEKLFNLNS"
     gene            10001..10537
                     /gene="rnmV"
                     /locus_tag="O7798_001755"
     CDS             10001..10537
                     /gene="rnmV"
                     /locus_tag="O7798_001755"
                     /EC_number="3.1.26.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499042.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease M5"
                     /protein_id="HDC2864014.1"
                     /translation="MKINEFIVVEGRDDTERVKRAVECDTIETNGSAINEQTLEVIRN
                     AQQSRGVIVLTDPDFPGDKIRSTITEHVKGVKHAYIDREKAKNKKGKIGVEHADLIDI
                     KEALMHVSSPFDEAYESIDKSVLIELGLIVGKDARRRREILSRKLRIGHSNGKQLLKK
                     LNAFGYTEADVRQALEDE"
     gene            10548..11441
                     /gene="rsmA"
                     /locus_tag="O7798_001756"
     CDS             10548..11441
                     /gene="rsmA"
                     /locus_tag="O7798_001756"
                     /EC_number="2.1.1.182"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499043.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA
                     (adenine(1518)-N(6)/adenine(1519)-N(6))-
                     dimethyltransferase RsmA"
                     /protein_id="HDC2864015.1"
                     /translation="MLDNKDIATPSRTRALLDKYGFNFKKSLGQNFLIDVNIINNIID
                     ASDIDAQTGVIEIGPGMGSLTEQLARHAKRVLAFEIDQRLIPVLNDTLSPYDNVTVIN
                     EDILKANIKEAVENHLQDCEKIMVVANLPYYITTPILLNLMQQDIPIDGYVVMMQKEV
                     GERLNAEVGSKAYGSLSIVVQYYTETSKVLTVPKSVFMPPPNVDSIVVKLMQRTEPLV
                     TVDNEEAFFKLAKAAFAQRRKTINNNYQNYFKDGKQHKEVILQWLEQAGIDPRRRGET
                     LSIQDFAKLYEEKKKFPQLEN"
     gene            11541..11804
                     /locus_tag="O7798_001757"
     CDS             11541..11804
                     /locus_tag="O7798_001757"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499044.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Veg family protein"
                     /protein_id="HDC2864016.1"
                     /translation="MPKSILDIKNSIDCHVGNRIVLKANGGRKKTIKRSGILKETYPS
                     VFIVELDQDKHNFERVSYTYTDVLTENVQVSFEEDNHHESIAH"
BASE COUNT         4339 a         1579 c         2360 g         3633 t
ORIGIN      
        1 gttactatat aattaatact tttgaaagta actaattcca aaacagtgta aataaaggaa
       61 gcgtatatca tgaagcaacc tattttaaat aaattagaaa gtttaaatca agaagaagcg
      121 atttctttgc atgttccggg tcataaaaat atgactatcg gtcatttatc tcaattatca
      181 atgacaatgg ataaaactga aatacctgga ttagatgatt tacatcatcc tgaagaagtc
      241 attttggaaa gtatgaagca ggtggagaaa cattcagatt atgatgctta tttcttagtg
      301 aatggcacca cttcaggaat attatctgtc atccagtctt tttcacagaa aaaaggcgat
      361 atcttaatgg caagaaatgt acataaatct gtgttacatg cgctcgatat tagccaacaa
      421 gaagggcatt ttattgaaac gcatcaaagt ccgttaacga atcattataa taaagttaat
      481 ttaagccgtt tgaataatga cggtcacaaa cttgctgtgt tgacttatcc taactattac
      541 ggtgaaacat ttaatgtaga agaggttatc aaatctttgc accaattaaa tattcctgta
      601 ctcattgacg aagcacacgg cgcgcacttt ggattgcaag gatttccaga ttctacatta
      661 aattatcaag ctgactatgt tgttcaatct tttcataaaa cgttaccagc tttaacgatg
      721 ggctcggtac tttatattca taaaaatgca ccttatagag aaactattat agaatatcta
      781 agctacttcc aaacatctag tccttcgtat ttgattatgg ctagtttaga gtcagctgcc
      841 gagttctata aaacatatga tagtaccgtg ttttttgata agagagcgca attaatcgaa
      901 tgtttggaga agaagggttt tgaaatgctt caagttgatg atccgttgaa gttgctgata
      961 aaatatgaag gttttacagg tcatgatatt caaaattggt ttatgaatgc acatatctat
     1021 ttagaattag cggacgacta tcaagcatta gcgatattgc cgttatggca tcatgatgat
     1081 acgtatttat ttgattcgct tttacgtaaa attgaagata tgattttacc gaaaaaatca
     1141 gtttctaaag ttaaacaaac acaactttta acaactgaag gtaactataa accaaaacgc
     1201 tttgaatatg ttacttggtg tgatttgaaa aaggcaaaag gtaaagttct ggcgcgacat
     1261 attgtcccgt atccgccagg gattcctatt attttcaaag gagaaacaat aactgaaaat
     1321 atgatagaat tggtaaatga atatctggaa actggaatga tagttgaagg aattaaaaat
     1381 aataaaattt tagttgagga tgaataaaat gtcagctttt ataacttttg agggcccaga
     1441 aggctctgga aaaacaactg taattaatga agtttaccat agattagtaa aagattatga
     1501 tgtcattatg actagagaac caggtggtgt tcctactggt gaagaaatac gtaaaattgt
     1561 attagaaggc aatgatatgg acattagaac tgaagcaatg ttatttgctg catctagaag
     1621 agaacatctt gtattaaagg tcataccagc tttaaaagaa ggtaaggttg tgttgtgtga
     1681 tcgctatatc gatagttcat tagcttatca aggttatgct agagggattg gcgttgaaga
     1741 agtaagagca ttaaacgaat ttgcaataaa tggattatat ccagacttga cgatttattt
     1801 aaatgttagt gctgaagtag gtcgcgaacg tattattaaa aattcaagag atcaaaatag
     1861 attagatcaa gaagatttaa agtttcacga aaaagtaatt gaaggttacc aagaaatcat
     1921 tcataatgaa tcacaacggt tcaaaagcgt taatgcagat caacctcttg aaaatgttgt
     1981 tgaagacacg tatcaaacta tcatcaaata tttagaaaag atatgatata attgttagaa
     2041 gaggtgttat aaaatgaaaa tgattatagc gatcgtacaa gatcaagata gtcaggaact
     2101 tgcagatcaa cttgttaaaa ataactttag agcaacaaaa ttggcaacaa caggtgggtt
     2161 tttaagagcg ggtaatacaa cattcttatg tggtgtcaat gatgaccgtg tagatgaaat
     2221 attgtctgtg attaatcaaa cgtgtggtaa tagagaacag ttggtttcac ctattacacc
     2281 tatgggaggc agtgcggatt cgtacattcc atatccagtt gaagttgaag ttggcggtgc
     2341 tactgtattt gttatgccag ttgatgcatt ccatcaattt taattctata atacaatcat
     2401 caattagaga tacttaaaat agtgtattaa taagttatta acaattttgg gttgcttgac
     2461 tgcgactagt tcagatgcca atagatttga tttttgtggt tctaaaaata atcacaaatc
     2521 atggtcgcta ttgttgcagt aattagttgc tctttggcaa cctttttata taaaagcaaa
     2581 agggagtttg taatgaatgg atgaacagca acaattgacg aatgcatatc attcaaataa
     2641 attatcgcat gcctatttat ttgaaggtga tgatgcacaa acgatgaaac aagttgcgat
     2701 taattttgca aagcttattt tatgtcaaac agatagtcaa tgtgaaacaa aggttagtac
     2761 atataatcat ccagacttta tgtatatatc aacaactgag aatgcaatta agaaagaaca
     2821 agttgaacaa cttgtgcgtc atatgaatca acttcctata gaaagcacaa ataaagtgta
     2881 catcattgaa gactttgaaa agttaactgt tcaaggggaa aacagtatct tgaaatttct
     2941 tgaagaacca ccggacaata cgattgctat tttattgtct acaaaacctg agcaaatttt
     3001 agacacaatc cattcaaggt gtcagcatgt atatttcaag cctattgata aagaaaagtt
     3061 tataaataga ttagttgaac aaaacatgtc taagccagta gctgaaatga ttagtactta
     3121 tactacgcaa atagataatg caatggcttt aaatgaagaa tttgatttat tagcattaag
     3181 gaaatcagtt atacgttggt gtgaattgtt gcttactaat aagccaatgg cacttatagg
     3241 tattattgat ttattgaaac aggctaaaaa taaaaaactg caatctttaa ctattgcagc
     3301 tgtgaatggt ttcttcgaag atatcataca tacaaaggta aatgtagagg ataaacaaat
     3361 atatagtgat ttaaaaaatg atattgatca atatgcgcaa aagttgtcgt ttaatcaatt
     3421 aattttgatg tttgatcaac tgacggaagc acataagaaa ttgaatcaaa atgtaaatcc
     3481 aacgcttgta tttgaacaaa tcgtaattaa gggtgtgagt tagatgccaa atgtaatagg
     3541 tgttcagttt caaaaagcgg gaaaattaga atattataca cctaatgata tacaagtaga
     3601 tatagaagac tgggtagttg tcgaatctaa aagaggcata gagataggta ttgttaaaaa
     3661 tccattaatg gatattgctg aagaggatgt tgtgttacct cttaaaaata ttattcgcat
     3721 tgctgatgac aaagatattg ataaatttaa ttgtaatgaa cgagatgctg aaaatgcatt
     3781 aatactatgt aaagacattg taagagaaca aggtttggac atgcgtttag tcaattgcga
     3841 atatacatta gataaatcga aagttatttt taattttacg gcggatgatc gtattgattt
     3901 tagaaaatta gtaaaaatat tagcgcaaca tttaaaaaca cgtatcgagt tgagacaaat
     3961 tggtgtaagg gatgaagcca aattgcttgg cggtatcgga ccttgtggta ggtcgttatg
     4021 ttgttctaca tttttagggg attttgaacc agtatcgatt aagatggcta aggatcaaaa
     4081 tttatcatta aatccaacta aaatttctgg tgcatgtggt cgtttgatgt gttgtttaaa
     4141 atatgaaaat gactattatg aggaagtacg tgcacaatta cctgatattg gtgaagcaat
     4201 tgaaacgcct gatggtaacg ggaaagtagt tgctttaaat atattagaca tttctatgca
     4261 ggtgaagctt gagggacatg aacagccact tgaatataaa ttagaagaaa tagaaactat
     4321 gcattaagga ggcattatta catttggatc gcaatgaaat atttgaaaaa ataatgcgtt
     4381 tagaaatgaa tgtcaatcaa ctttcaaagg aaacttcaga attaaaggca cttgcagttg
     4441 aattagtaga agaaaatgta gcgcttcaac ttgaaaatga taatttgaaa aaggtgttgg
     4501 gcaatgatga accaactact attgatactg cgaattcaaa accagcaaaa gctgtgaaaa
     4561 agccattacc aagtaaagat aatttggcta tattgtatgg agaaggattt catatttgta
     4621 aaggcgaatt atttggaaaa catcgacatg gtgaagattg tctgttctgt ttagaagttt
     4681 taagtgatta atcaagcaca ctcaaatagt gttataatta taaatgaata tggtttggat
     4741 aagtctgaga caatgcatgt ttcaggcttt aattgtgtat aaagttttgg tgattgcata
     4801 agagatggcg gtactaaatg ttattattaa gtgtgcacgc agtatcatta gttataaaat
     4861 gtagctgtta aaagtcaaaa atacatcgaa tgtagttagg catataatat aaaaagagtt
     4921 ttcaattact caatagaaaa aggttgtctt cataggagtt aaaaatgtta aaagagaatg
     4981 aacgatttga tcaactaatc aaagaagatt ttagtattat tcaaaatgat gatgtttttt
     5041 cattttcaac ggatgctttg ttgttagggc attttacaaa acctagaaca aaagatattg
     5101 tgttggactt atgttcaggc aatggggtga tacccttgtt attgtttgcg aaacatccac
     5161 gacatataga aggtgttgag attcaaaaaa cacttgtcga tatggcgcga cgcacatttc
     5221 aattcaatga tgttgatgaa tatttaacaa tgcatcacat ggatttgaaa aacgttacta
     5281 aagtatttaa accttcacaa tatactttag taacgtgtaa tccgccttat tttaaagaga
     5341 atcagcaaca ccaacatcaa aaagaagcac ataagatagc gagacatgag attatgtgta
     5401 cacttgaaga ttgcatgatt gcagcccgtc atttattaaa agaaggtggc aggctaaaca
     5461 tggtacatcg tgcagagaga ctaatggatg tcttgtttga aatgagaaaa gtgaatattg
     5521 aacctaagaa agtcgttttt atatatagta aagtagggaa atcagcacaa acgatagtag
     5581 tagaaggtcg aaaaggtgga aatcaaggtt tagaaatcat gcccccattt tatatttata
     5641 atgaagatgg taattatagc gaagaaatga aggaagtata ttatggatag tcattttgta
     5701 tatattgtaa aatgtagtga tggaagttta tatacaggat acgctaaaga cgttaatgca
     5761 cgtgttgaaa aacataaccg aggtcaagga gccaaatata cgaaagtaag acgtccggtg
     5821 catttagttt atcaagaaat gtatgagaca aagtctgaag cattgaagcg tgaatatgaa
     5881 attaaaactt ataccagaca aaagaaattg cgattaatta aggagcgata gtatggctgt
     5941 attatattta gtgggcacac caattggtaa tttagcagat attacttata gagcagttga
     6001 tgtattgaaa cgtgttgata tgattgcttg tgaagacact agagtaacta gtaaactgtg
     6061 taatcattat gatattccaa ctccattaaa gtcatatcac gaacataaca aggataagca
     6121 gactgctttt atcattgaac agttagaatt aggtcttgac gttgcgctcg tatctgatgc
     6181 tggattgccc ttaattagtg atcctggata cgaattagta gtggcagcca gagaagctaa
     6241 tattaaagta gagactgtgc ctggacctaa tgctgggctg acggctttga tggctagtgg
     6301 attaccttca tatgtatata catttttagg atttttgcca cgaaaagaga aagaaaaaag
     6361 tgctgtatta gagcaacgta tgcatgaaaa tagcacatta attatatacg aatcaccgca
     6421 tcgtgtgaca gatacattaa aaacaattgc aaagatagat gcaacacgac aagtatcact
     6481 agggcgtgaa ttaactaaga agttcgaaca aattgtaact gatgatgtaa cacaattaca
     6541 agcattgatt cagcaaggcg atgtaccatt gaaaggcgaa ttcgttatct taattgaagg
     6601 tgctaaagcg aacaatgaga tatcgtggtt tgatgattta tctatcaatg agcatgttga
     6661 tcattatatt caaacttcac agatgaaacc aaaacaagct attaaaaaag ttgctgaaga
     6721 acgacaactt aaaacgaatg aagtatataa tatttatcat caaataagtt aatcacttta
     6781 tcgattatat gaaattttaa acgattttat aaacgcaagc tgtaatttta aatggtaagt
     6841 tatcattttg cattgatact gataaaatga tgttgactat gataaaaaaa tgatgacatc
     6901 gacgtttttt aatgtaaaat aaatacattg aaagtaataa ataccttaac attgaataag
     6961 atgaaaatga gatgacgaga taaatgttcg cgtccgttga aatgcataga aatcttagat
     7021 attatttgaa gtgagacatt acgaggagga acagttatgg ctaaagaaac attttatata
     7081 acaaccccaa tatactatcc tagtgggaat ttacatatag gacatgcata ttctacagtg
     7141 gctggagatg ttattgcaag atataagaga atgcaaggat atgatgttcg ctatttgact
     7201 ggaacggatg aacacggtca aaaaattcaa gaaaaagctc aaaaagctgg taagacagaa
     7261 attgaatatt tggatgagat gattgctgga attaaacaat tgtgggctaa gcttgaaatt
     7321 ttaaatgatg attttatcag aacaactgaa gaacgtcata aacatgtcgt tgagcaagtg
     7381 tttgaacgtt tattaaagca aggtgatatc tatttaggtg aatatgaagg ttggtattct
     7441 gttccggatg aaacatacta tacagagtca caattagtag acccacaata cgaaaacggt
     7501 aaaattattg gtggcaaaag tccagattct ggacacgaag ttgaactagt taaagaagaa
     7561 agttatttct ttaatattag taaatataca gaccgtttat tagagttcta tgaccaaaat
     7621 ccagatttta tacaaccacc atcaagaaaa aatgaaatga ttaacaactt cattaaacca
     7681 ggacttgctg atttagctgt ttctcgtaca tcatttaact ggggtgtcca tgttccgtct
     7741 aatccaaaac atgttgttta tgtttggatt gatgcgttag ttaactatat ttcagcatta
     7801 ggctatttat cagatgatga gtcactattt aacaaatact ggccagcaga tattcattta
     7861 atggctaagg aaattgtgcg attccactca attatttggc ctattttatt gatggcatta
     7921 gacttaccgt tacctaaaaa agtctttgca catggttgga ttttgatgaa agatggaaaa
     7981 atgagtaaat ctaaaggtaa tgtcgtagac cctaatattt taattgatcg ctatggttta
     8041 gatgctacac gttattatct aatgcgtgaa ttaccatttg gttcagatgg cgtatttaca
     8101 cctgaagcat ttgttgagcg tacaaatttc gatctagcaa atgacttagg taacttagta
     8161 aaccgtacga tttctatggt taataagtac tttgatggcg aattaccagc gtatcaaggt
     8221 ccacttcatg aattagatga agaaatggaa gctatggctt tagaaacagt gaaaagctac
     8281 actgaaagca tggaaagttt gcaattttct gtggcattat ctacggtatg gaagtttatt
     8341 agtagaacga ataagtatat tgacgaaaca acgccttggg tattagctaa ggacgatagc
     8401 caaaaagata tgttaggcaa tgtaatggct cacttagttg aaaatattcg ttatgcagct
     8461 gtattattac gtccattctt aacacatgcg ccgaaagaga tttttgaaca attgaacatt
     8521 aacaatcctc aatttatgga atttagtagt ttagagcaat atggtgtgct taatgagtca
     8581 attatggtta ctgggcaacc taaacctatt ttcccaagat tggatagcga agcggaaatt
     8641 gcatatatca aagaatcaat gcaaccgcct gctactaaag aggaaaaaga agagattcct
     8701 agcaaacctc aaattgatat taaagacttt gataaagttg aaattaaggc agcaacgatt
     8761 attgatgctg aacatgttaa gaagtcagat aagcttttaa aaattcaagt agacttagat
     8821 tctgaacaaa gacaaattgt atcaggaatt gccaaattct atacaccaga tgatattatt
     8881 ggtaaaaaag tagcagttgt tactaacctg aaaccagcta aattaatggg acaaaaatct
     8941 gaaggtatga tattatctgc tgaaaaagat ggtgtattaa ccttagtaag tttaccaagt
     9001 gcaattccaa atggtgcagt gattaaataa ctgtattttt aaaaattagg agagataatt
     9061 atgttaatcg atacacatgt ccatttaaat gatgagcaat acgatgatga tttgagtgaa
     9121 gtgattacac gtgctagaga agcaggtgtt gatcgtatgt ttgtagttgg ttttaacaaa
     9181 tcgacaattg aacgcgcgat gaaattaatc gatgagtatg attttttata tggcattatc
     9241 ggttggcatc cagttgacgc aattgatttt acagaagaac acttggaatg gattgaatct
     9301 ttagctcagc atccaaaagt gattggtatt ggtgaaatgg gattagatta tcactgggat
     9361 aaatctcctg cagatgttca aaaggaagtt tttagaaagc aaattgcttt agctaagcgt
     9421 ttgaagttac caattatcat tcataaccgt gaagcaactc aagactgtat cgatatctta
     9481 ttggaggagc atgctgaaga ggtaggcggg attatgcata gctttagtgg ttctccagaa
     9541 attgcagata ttgtaactaa taagctgaat ttttatattt cattaggtgg acctgtgaca
     9601 tttaaaaatg ctaaacagcc taaagaagtt gctaagcatg tgtcaatgga gcgtttgcta
     9661 gttgaaaccg atgcaccgta tctttcgcca catccgtata gagggaagcg aaatgaaccg
     9721 gcgagagtaa ctttagtagc tgaacaaatt gctgaattaa aaggcttatc ttatgaagaa
     9781 gtgtgcgaac aaacaactaa aaatgcagag aaattgttta atttaaattc ataaagttaa
     9841 aagtgagaaa gatcaccgcc ataaatgtaa acgatgctat attcgtttaa tatgctatgg
     9901 ttctttctca cttttttaaa ttaaaatatc gtgcatgtgg aatacgtgcg atagagatgg
     9961 ttagagcttt gaaattaaga attgtaggaa ggcgttttaa atgaaaatca atgagtttat
    10021 agttgtagaa ggacgagatg atactgagcg tgttaaacga gctgttgaat gtgatacgat
    10081 tgaaacgaat ggtagtgcca tcaacgaaca aactttagaa gtaattagaa atgctcaaca
    10141 aagtcgaggc gttattgtat taacagatcc agatttccca ggagataaaa ttagaagtac
    10201 aattactgaa catgtcaaag gtgttaaaca tgcgtatatt gatagagaaa aagctaaaaa
    10261 taaaaaaggg aaaattggtg ttgaacatgc cgacttaatt gatattaaag aagcgttaat
    10321 gcatgttagt tcaccctttg atgaagctta tgaatcaatt gataaatctg tgctaataga
    10381 gttggggtta attgttggga aagatgcaag gcgccgtaga gaaattttaa gtagaaaatt
    10441 gcgaatcggc cattccaatg gtaagcagtt attgaaaaag ttaaatgcat ttggttatac
    10501 cgaagcggat gtaaggcaag ctttagaaga tgaatgagga agtgaaaatg ttggataata
    10561 aagatattgc aacaccatca agaacgcgag cgttgttaga taaatatggc tttaatttta
    10621 aaaaaagttt aggacagaac tttttgatag atgtgaatat cattaataat atcattgatg
    10681 caagtgatat tgatgcacaa actggggtga ttgaaattgg tccaggcatg gggtcattga
    10741 cagaacaatt ggccagacat gctaaaagag tattggcatt tgaaattgat caacgtttaa
    10801 tacctgtatt aaatgataca ctatcacctt atgataatgt gacggtgatt aatgaagata
    10861 ttttaaaagc gaatattaaa gaagctgttg aaaatcattt acaagattgt gaaaaaataa
    10921 tggttgttgc aaacctgccg tactatatta cgacgccaat tttattaaat ttgatgcaac
    10981 aagatatacc aattgatggc tacgtggtga tgatgcaaaa agaagtgggc gaacgcttaa
    11041 atgctgaagt aggttcaaaa gcatatggtt cgttatcaat tgtcgtacaa tactatacag
    11101 agactagtaa agtattaacg gtacctaaat ctgtatttat gccaccacct aatgttgatt
    11161 caatagttgt aaaactgatg cagagaactg aaccgttagt aacagtagat aacgaggaag
    11221 cattctttaa gttagcaaaa gcagcatttg cacaaagaag aaagacaatt aacaataact
    11281 atcaaaatta ttttaaagat ggtaaacaac acaaagaagt gattttacaa tggttggaac
    11341 aagcaggtat tgatccaaga cgtcgcggtg aaacgctatc tattcaagat tttgctaaat
    11401 tgtatgaaga aaagaaaaaa ttccctcaat tagaaaatta aatgattgac aaagcaaagc
    11461 actattgtta aaatttaaat tttgtttgac gaaaacgttg caaatatggt attatgtaac
    11521 ttgtagcgag gtggagcaat atgccaaaat caattttgga catcaaaaat tctattgatt
    11581 gtcatgtagg aaatcgtatt gtactgaaag ccaatggagg ccgtaagaaa acaataaaac
    11641 gttctggaat tttaaaagaa acatatccgt cagttttcat tgttgagtta gatcaagaca
    11701 aacacaactt tgagagagta tcttatacat acactgatgt gttaactgaa aatgttcaag
    11761 tttcatttga agaggataat catcacgaat caattgcaca ctaaataaga catatagaga
    11821 tgttagacgt ttcttagtat aagaagtaaa tattatgata attatttgag tgttgggcat
    11881 tatgttcaat actcttttta tttacaaaat g
//
LOCUS       DALPQQ010000078        11770 bp    DNA     linear   BCT 22-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus strain K18-6-464
            SAMD00233528-rid16434743.denovo.078, whole genome shotgun sequence.
ACCESSION   DALPQQ010000078 DALPQQ010000000
VERSION     DALPQQ010000078.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMD00233528
            Sequence Read Archive: DRR236061
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 11770)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11770)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001543423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001543423.1
            Genome Coverage       :: 77x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/22/2022 17:09:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,811
            CDSs (total)                      :: 2,743
            Genes (coding)                    :: 2,689
            CDSs (with protein)               :: 2,689
            Genes (RNA)                       :: 68
            rRNAs                             :: 2, 4, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 4, 2 (16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 54
            CDSs (without protein)            :: 54
            Pseudo Genes (ambiguous residues) :: 0 of 54
            Pseudo Genes (frameshifted)       :: 27 of 54
            Pseudo Genes (incomplete)         :: 27 of 54
            Pseudo Genes (internal stop)      :: 10 of 54
            Pseudo Genes (multiple problems)  :: 10 of 54
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11770
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMD00233528-rid16434743.denovo.078"
                     /strain="K18-6-464"
                     /db_xref="taxon:1280"
                     /geo_loc_name="Japan: Niigata"
     gene            <1..186
                     /locus_tag="O7798_001758"
     CDS             <1..186
                     /locus_tag="O7798_001758"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDC2864017.1"
                     /translation="APTQRISKRNSTGNASWGEGPNTEADEKSAYNNVQVGDGPQQRE
                     IGFPISTDNASWGGTTK"
     gene            521..3226
                     /gene="acnA"
                     /locus_tag="O7798_001759"
     CDS             521..3226
                     /gene="acnA"
                     /locus_tag="O7798_001759"
                     /EC_number="4.2.1.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499875.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aconitate hydratase AcnA"
                     /protein_id="HDC2864018.1"
                     /translation="MAANFKEQSKKHFDLNGQSYTYYDLKAVEEQGITKVSNLPYSIR
                     VLLESLLRQEDDFVITDDHIKALSQFGKDGNEGEVPFKPSRVILQDFTGVPAVVDLAS
                     LRKAMDDVGGDITKINPEVPVDLVIDHSVQVDSYANPEALERNMKLEFERNYERYQFL
                     NWATKAFDNYNAVPPATGIVHQVNLEYLASVVHVRDVDGEKTAFPDTLVGTDSHTTMI
                     NGIGVLGWGVGGIEAEAGMLGQPSYFPIPEVIGVRLVNSLPQGATATDLALRVTQELR
                     KKGVVGKFVEFFGPGVQHLPLADRATIANMAPEYGATCGFFPVDDESLKYMKLTGRSD
                     EHIALVKEYLKQNHMFFDVEKEDPNYTDVIELDLSTVEASLSGPKRPQDLIFLSDMKS
                     SFENSVTAPAGNQGHGLDKSEFDKKAEINFKDGSKATMKTGDIAIAAITSCTNTSNPY
                     VMLGAGLVAKKAVEKGLKVPEYVKTSLAPGSKVVTGYLRDAGLQPYLDDLGFNLVGYG
                     CTTCIGNSGPLLPEIEKAIADEDLLVTSVLSGNRNFEGRIHPLVKANYLASPQLVVAY
                     ALAGTVDIDLQNEPIGKGNDGEDVYLKDIWPSIKEVSDTVDSVVTPELFIEEYNNVYN
                     NNELWNEIDVTDQPLYDFDPNSTYIQNPSFFQGLSKEPGTIVPLNGLRVMGKFGDSVT
                     TDHISPAGAIGKDTPAGKYLQDHQVPIREFNSYGSRRGNHEVMVRGTFANIRIKNQLA
                     PGTEGGFTTYWPTNEVMPIFDAAMKYKEDGTGLVVLAGNDYGMGSSRDWAAKGTNLLG
                     VKTVIAQSYERIHRSNLVMMGVLPLEFKKGESADSLGLDGTEEISVNIDENVQPHDYV
                     KVTAKKQDGDLVEFDAMVRFDSLVEMDYYRHGGILQMVLRNKLAQ"
     gene            3406..3873
                     /locus_tag="O7798_001760"
     CDS             3406..3873
                     /locus_tag="O7798_001760"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499876.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA thioesterase"
                     /protein_id="HDC2864019.1"
                     /translation="MIYSITEIEARYAETDKMGVIYHGNYATWFEVARLDYISKLGFS
                     YADMEKQGIISPVTDLNVNYKKSIFYPEKVKVKTWVEKYSRLRSVYKYEIFNEKGELA
                     TTGSTELICIKEDTFKPIRLDRYFPDWHEAYSKVQTLNNEGKTVEIMDGIDSL"
     gene            complement(4080..4376)
                     /locus_tag="O7798_001761"
     CDS             complement(4080..4376)
                     /locus_tag="O7798_001761"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499877.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HesB/YadR/YfhF family protein"
                     /protein_id="HDC2864020.1"
                     /translation="MQIELTDAAVTWFKNELELPENNKVLVFFVRYGGEFQLKQGFSP
                     AFTVEPKEDVDIGYEQQYDDLNVVVAEKDLWYFEDDHIIVNVVDHEDEISYSTK"
     gene            complement(4752..5360)
                     /gene="plsY"
                     /locus_tag="O7798_001762"
     CDS             complement(4752..5360)
                     /gene="plsY"
                     /locus_tag="O7798_001762"
                     /EC_number="2.3.1.15"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499878.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycerol-3-phosphate 1-O-acyltransferase PlsY"
                     /protein_id="HDC2864021.1"
                     /translation="MMIIVMLLLSYLIGAFPSGFVIGKLFFKKDIRQFGSGNTGATNS
                     FRVLGRPAGFLVTFLDIFKGFITVFFPLWLQVHADGPISTFFTNGLIVGLFAILGHVY
                     PVYLKFQGGKAVATSAGVVLGVNPILLLILAIIFFIVLKIFKYVSLASIVAAICCVIG
                     SLIIQDYILLVVSFLVSIILIIRHRSNIARIFRGEEPKIKWM"
     gene            5566..7557
                     /gene="parE"
                     /locus_tag="O7798_001763"
     CDS             5566..7557
                     /gene="parE"
                     /locus_tag="O7798_001763"
                     /EC_number="5.6.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499879.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA topoisomerase IV subunit B"
                     /protein_id="HDC2864022.1"
                     /translation="MNKQNNYSDDSIQVLEGLEAVRKRPGMYIGSTDKRGLHHLVYEI
                     VDNSVDEVLNGYGNEIDVTINKDGSISIEDNGRGMPTGIHKSGKPTVEVIFTVLHAGG
                     KFGQGGYKTSGGLHGVGASVVNALSEWLEVEIHRDGNIYHQSFKNGGSPSSGLVKKGK
                     TKKTGTKVTFKPDDTIFKASTSFNFDVLSERLQESAFLLKNLKITLNDLRSGKERQEH
                     YHYEEGIKEFVSYVNEGKEVLHDVATFSGEANGIEVDVAFQYNDQYSESILSFVNNVR
                     TKDGGTHEVGFKTAMTRVFNDYARRINELKTKDKNLDGNDIREGLTAVVSVRIPEELL
                     QFEGQTKSKLGTSEARSAVDSVVADKLPFYLEEKGQLSKSLVKKAIKAQQAREAARKA
                     REDARSGKKNKRKDTLLSGKLTPAQSKNTEKNELYLVEGDSAGGSAKLGRDRKFQAIL
                     PLRGKVINTEKARLEDIFKNEEINTIIHTIGAGVGTDFKIEDSNYNRVIIMTDADTDG
                     AHIQVLLLTFFFKYMKPLVQAGRVFIALPPLYKLEKGKGKTKRVEYAWTDEELNKLQK
                     ELGKGFTLQRYKGLGEMNPEQLWETTMNPETRTLIRVQVEDEVRSSKRVTTLMGDKVQ
                     PRREWIEKHVEFGMQEDQSILDNSEVQVLENDQFDEEEI"
     gene            7557..9959
                     /gene="parC"
                     /locus_tag="O7798_001764"
     CDS             7557..9959
                     /gene="parC"
                     /locus_tag="O7798_001764"
                     /EC_number="5.6.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499880.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA topoisomerase IV subunit A"
                     /protein_id="HDC2864023.1"
                     /translation="MSEIIQDLSLEDVLGDRFGRYSKYIIQERALPDVRDGLKPVQRR
                     ILYAMYSSGNTHDKNFRKSAKTVGDVIGQYHPHGDSSVYEAMVRLSQDWKLRHVLIEM
                     HGNNGSIDNDPPAAMRYTEAKLSLLAEELLRDINKETVSFIPNYDDTTLEPMVLPSRF
                     PNLLVNGSTGISAGYATDIPPHNLAEVIQATLKYIDNPDITVNQLMKYIKGPDFPTGG
                     IIQGIDGIKKAYESGKGRIIVRSKVEEETLRNGRKQLIITEIPYEVNKSSLVKRIDEL
                     RADKKVDGIVEVRDETDRTGLRIAIELKKDVNSESIKNYLYKNSDLQISYNFNMVAIS
                     DGRPKLMGIRQIIDSYLNHQIEVVANRTKFELDNAEKRMHIVEGLIKALSILDKVIEL
                     IRSSKNKRDAKENLIEVYEFTEEQAEAIVMLQLYRLTNTDIVALEGEHKELEALIKQL
                     RHILDNHDALLNVIKEELNEIKKKFKSERLSLIEAEIEEIKIDKEVMVPSEEVILSMT
                     RHGYIKRTSIRSFNASGVEDIGLKDGDSLLKHQEVNTQDTVLVFTNKGRYLFIPVHKL
                     ADIRWKELGQHVSQIVPIEEDEVVINVFNEKDFNTDAFYVFATQNGMIKKSTVPLFKT
                     TRFNKPLIATKVKENDDLISVMRFEKDQLITVITNKGMSLTYNTSELSDTGLRAAGVK
                     SINLKAEDFVVMTEGVSENDTILMATQRGSLKRISFKILQVAKRAQRGITLLKELKKN
                     PHRIVAAHVVTGEHSQYTLYSKSNEEHGLINDIHKSEQYTNGSFIVDTDDFGEVIDMY
                     IS"
     gene            10209..11669
                     /locus_tag="O7798_001765"
     CDS             10209..11669
                     /locus_tag="O7798_001765"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499882.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alanine:cation symporter family protein"
                     /protein_id="HDC2864024.1"
                     /translation="MKDFDSLIPGWFKEFVHVGTDLIWSQYLIGLLLTAGFFFTISSK
                     FVQLRMLPEMFRALVERPETLEDGKKGISPFQAFAISAGSRVGTGNIAGVATAIVLGG
                     PGAVFWMWVIAFIGAASAFIEATLAQVYKVHDKDGGFRGGPAYYITKGLNQKWLGIVF
                     AILITITFAFVFNTVQSNTIAESLNTQYNISPVITGIILAIVTAIIIFGGVRSIATLS
                     SLIVPIMAIIYIGMVLVILLFNLDQIVPMIGTIIKSAFGIEQVTGGAVGAAVLQGIKR
                     GLFSNEAGMGSAPNAAATAAVPHPVKQGLIQSLGVFFDTMLVCTATAIMILLYSGLKF
                     GDNAPQGVAVTQSALNEHLGSAGGIFLTIAVTLFAFSSVVGNYYYGQSNIEFLSTNRV
                     ILFIFRCLVVVLVFVGAVVKTETVWNTADLFMGLMAIVNIISIIGLSNVAFALMKDYQ
                     KQKKEGKNPVFKPENLEINLFGISAWGANKYKNSDK"
BASE COUNT         4116 a         1710 c         2257 g         3687 t
ORIGIN      
        1 gccccaacac agagaatttc gaaaagaaat tctacaggca atgcgagttg gggtgagggc
       61 cccaacacag aagctgacga aaagtcagct tacaataatg tgcaagttgg ggatgggccc
      121 caacaaagag aaattggatt cccaatttct acagacaatg caagttgggg tgggacgacg
      181 aaataaattt tgcgaaaata tcatttctgt cccactccca tcaaaagaat gacattgaaa
      241 aaaatattaa agtttggtgc cataattttc tttctgctca atgaaataat acgtttaaaa
      301 attgaattga atcattcgcg aaattgataa ttattctcaa ttaataaaaa atacttatta
      361 caccttacct gtatgataag ttttgcttat atactctgat taaaaagtca aaacctaaat
      421 taagcgtttt ctaagcatga tgagttgttt atcaataaat ataataatac aatttaatca
      481 aggcatataa atataaaaat gtatcaaggg ggatcattaa atggctgcaa attttaaaga
      541 gcaatcaaaa aaacattttg acttgaatgg ccaaagttat acttactatg atttaaaagc
      601 tgtagaagag caaggtatta ctaaagtttc caatttacct tattcaattc gtgttttgtt
      661 agaatcttta cttcgtcaag aagatgattt tgtaattaca gacgatcata ttaaagcttt
      721 aagtcagttt ggaaaagatg gaaatgaagg cgaggtacca tttaaacctt ctcgtgttat
      781 tttacaagat ttcacaggtg taccagccgt agttgattta gcttctttac gtaaagcaat
      841 ggatgacgtt gggggagata ttactaaaat taatccagaa gtaccggtgg atttagttat
      901 tgaccactca gttcaagtgg atagctatgc aaatccagaa gctcttgaac gtaatatgaa
      961 attagaattt gaacgtaact atgaacgtta tcagttttta aattgggcaa cgaaagcatt
     1021 tgataattac aatgcagttc ctcctgcaac tggaatagtt caccaagtta acttagaata
     1081 tttagcaagt gttgtacatg ttcgtgatgt agatggtgaa aaaactgcat ttccagatac
     1141 attagttggt actgattcac atacaacaat gataaatggt attggcgtac taggatgggg
     1201 tgttggtggt attgaagctg aagctggaat gcttggacaa ccttcttatt tcccaattcc
     1261 agaggttatt ggtgtacgac tagtaaattc attaccacaa ggcgcaacag caactgattt
     1321 agcgttaaga gtaactcaag agctacgtaa aaaaggtgtt gttggtaaat ttgtggagtt
     1381 ctttggtcca ggtgtacaac atttaccact agcagaccgt gctacaattg caaacatggc
     1441 accagagtat ggagcaactt gcggattctt cccagttgat gatgaatctc ttaaatatat
     1501 gaagttaact ggtagatcag acgaacatat cgcgctagta aaagaatatt tgaaacaaaa
     1561 ccatatgttc tttgatgttg agaaagaaga tcctaattat acagatgtta tcgaattgga
     1621 tttatcaaca gttgaagcat cgctttcagg accaaaacgt cctcaagatt taattttctt
     1681 aagtgatatg aaatcatcat ttgaaaattc tgtaacagct ccagcaggca accaaggaca
     1741 cggtttagat aaaagtgaat ttgataagaa agctgaaatt aactttaaag atggatcaaa
     1801 agctacaatg aaaacaggtg atattgcaat agcagcaatt acatcatgta caaatacatc
     1861 taacccttat gtaatgttag gtgcaggttt agttgctaaa aaagcagttg aaaaaggctt
     1921 gaaagttcct gaatacgtta aaacttctct agcaccagga tcaaaagttg ttaccggata
     1981 tttaagagat gctggcttac aaccttattt agatgattta ggcttcaact tggttggtta
     2041 tggatgtaca acttgtatcg gtaattcagg tcctttatta ccagaaattg aaaaagcgat
     2101 tgctgatgag gacctattag tgacatctgt attatctggt aaccgtaact ttgaaggtcg
     2161 tatccatcct cttgttaaag ccaattacct agcttcacca cagttagttg ttgcttatgc
     2221 attagctgga acggttgata ttgatttaca aaatgaacct attggtaaag gtaatgacgg
     2281 tgaagatgta tatttgaaag atatttggcc atcaattaaa gaagtttcag ataccgttga
     2341 tagtgttgta acacctgaat tatttattga agaatataat aacgtataca ataacaacga
     2401 attatggaat gagattgatg taactgatca acctctatat gactttgatc ctaattcaac
     2461 atacattcaa aatccatcat tcttccaagg attatctaaa gaaccgggta cgattgttcc
     2521 attaaatggt ttacgtgtta tgggtaaatt cggtgattct gtgacaactg accacatctc
     2581 tccagcaggt gcaattggta aagatacgcc agctggtaaa tatttacaag atcatcaagt
     2641 gcctattcgt gaatttaatt catatggttc aagacgtggt aatcacgaag taatggttcg
     2701 aggtacgttt gctaatatac gtattaaaaa ccaattagcg ccaggtactg aaggtggttt
     2761 tacaacttat tggccaacaa atgaagtaat gcctatcttt gatgctgcaa tgaaatataa
     2821 agaagatggt acaggtttag ttgtattagc tggtaacgat tatggtatgg gttcatctcg
     2881 tgactgggca gcaaaaggta caaacttatt aggtgttaaa acagttattg cacaaagtta
     2941 tgaacgtatc catcgttcaa atttagttat gatgggtgta ttaccattag agtttaaaaa
     3001 aggtgaatca gctgattctc ttggtctaga tggtacagaa gaaatttctg ttaatattga
     3061 tgaaaatgtt caaccacatg actacgtcaa agttactgct aagaagcaag atggtgattt
     3121 ggtagaattt gacgctatgg ttcgttttga ctcacttgtt gaaatggatt actatcgtca
     3181 cggtggaatt ttacaaatgg ttttaagaaa taaattagcg caataaaaaa tagatatcac
     3241 agtaaaattt taatcggtat ttgaggcact ttgatagtgc tcaaaaatac ttctataaac
     3301 tttatgatat aataggtcgg ttcaaaacct ttgtgttctt ggccggcctc ttcttgtatt
     3361 ttatgttaga atgagatata aagttaaact gaaagaaggc ttaaaatgat atatagtatt
     3421 acagaaatag aagcgcgtta tgctgaaact gataagatgg gtgtaattta tcacgggaat
     3481 tatgcaactt ggtttgaagt tgcgcggttg gattatatat cgaagttagg ttttagttat
     3541 gctgatatgg aaaaacaagg aatcatttca cctgtgactg acctcaatgt caattataaa
     3601 aagtctattt tttatccaga aaaagttaaa gttaaaactt gggttgaaaa atattcgaga
     3661 ttacgttcag tgtataaata tgagattttt aatgaaaaag gtgaacttgc aactacaggt
     3721 tccacagaat tgatttgcat taaagaagat acttttaagc ctatacggtt ggatcgttat
     3781 ttcccagatt ggcatgaagc ttatagtaaa gtgcaaacgc tcaataatga agggaaaaca
     3841 gtagagataa tggatggtat tgattcttta taagttactg taaatgtttg gagaggcaat
     3901 attaacaatt aatctataaa aaatagccaa tacgttaaca ttaatgtaat tagcgtgaag
     3961 ataagctaat atatagcaaa aacgaacttg ttcatacaac atcagatgtg ctaaaccaaa
     4021 gtacaacttc cgaggttcag gacacatcag aatgtgtaaa caagttcgtt ttattttagt
     4081 tattttgtgg aataagaaat ttcatcttcg tgatcaacta catttacaat aatgtggtca
     4141 tcttcaaagt accacaaatc tttttccgct acgacaacat ttaaatcgtc atattgttgt
     4201 tcatagccaa tatcaacatc ttcctttggt tcaactgtaa aagcaggact aaatccttgc
     4261 ttgagttgga attcgccacc atatcttaca aaaaacacga gcactttatt attttcaggc
     4321 aactcaagtt catttttaaa ccaagttact gctgcatcag taagttctat ttgcataaca
     4381 atgacctcct atatttatta cagaatggga gtgggccaac ttgtattatt tgtggaattt
     4441 cttatcgaaa ttctctgtgt tggagcccgc cccaacctgc tcattattgt aagctgaatt
     4501 tccataagct tctatgttgg gacccccgac cagaattgaa aaaacctagt tataagcgca
     4561 ttttgttcgg ttaactacag ctaatataac attgtggagc ctatgacatt gatttatgtc
     4621 tcggtctcaa atgttcttgt aaaaaaacta agtatagttg aattttaagt taaaaaaatt
     4681 gtttttgcaa aaataaaata atccatcaac tgcaaaaaaa tatgcaatga tggactaatg
     4741 tcaaaaaatt gttacatcca ttttatttta ggttcttcgc ctctaaaaat ccttgcgata
     4801 ttagagcgat gtctaattat caatatgatt gaaactaaga aactaacgac taataaaata
     4861 tagtcttgaa tgataagcga gccaatcaca cagcaaattg ctgcaacgat acttgctaaa
     4921 gaaacatatt taaaaatctt caatacaata aagaagataa ttgcaagtat tagtaaaagt
     4981 atcggattga ctcccaagac gacacctgca ctagttgcaa cagctttgcc accttggaat
     5041 tttaaataaa caggataaac gtgtccaagt atagcgaata agccaacaat taaaccattt
     5101 gtaaaaaaag tactaatagg gccatctgcg tgaacttgta accataaagg gaagaaaaca
     5161 gttatgaacc ctttgaaaat atctagaaat gttaccaaga atcctgcagg acgacctaat
     5221 actctaaagc tattagtagc gccagtatta ccactaccaa attgtctaat atcttttttg
     5281 aaaaataatt ttccaattac gaatccactt gggaaagcgc cgataagata acttagtagt
     5341 aacatgacga ttatcatcat aaatattaca catcctttaa tatcttagga ctattttatc
     5401 atattcattt aaattacggc taaaaatttt aaaaacgggg attaatatat ggaattaagc
     5461 tatgaaagtt aattgatact tgcattttac gctgatttat ataagaataa ctattgtata
     5521 gttttaaaaa cgaacgtacg tttgcaggag gcgaaatcat tggcaatgaa taaacaaaat
     5581 aattattcag atgattcaat acaggtttta gaggggttag aagcagttcg taaaagacct
     5641 ggtatgtata ttggatcaac tgataaacgg ggattacatc atctagtata tgaaattgtc
     5701 gataactccg tcgatgaagt attgaatggt tacggtaacg aaatagatgt aacaattaat
     5761 aaagatggta gtatttctat agaagataat ggacgtggta tgccaacagg tatacataaa
     5821 tcaggtaaac cgacagtcga agttatcttt actgttttac atgcaggagg taaatttgga
     5881 caaggcggct ataaaacttc aggtggtctt cacggtgttg gtgcttcagt tgtaaatgca
     5941 ttgagtgaat ggcttgaagt tgaaatccat cgagatggta atatatatca tcaaagtttt
     6001 aaaaacggtg gttcgccatc ttctggttta gtgaaaaaag gtaaaactaa gaaaacaggt
     6061 accaaagtaa catttaaacc tgatgacaca atttttaaag catctacatc atttaatttt
     6121 gatgttttaa gtgaacgact acaagagtct gcgttcttat tgaaaaattt aaaaataacg
     6181 cttaatgatt tacgcagtgg taaagagcgt caagagcatt accattatga agaaggaatc
     6241 aaagagtttg ttagttatgt caatgaagga aaagaagttt tgcatgacgt ggctacattt
     6301 tcaggtgaag caaatggtat agaggtagac gtagctttcc aatataatga tcaatattca
     6361 gaaagtattt taagttttgt aaataatgta cgtactaaag atggtggtac acatgaagtt
     6421 ggttttaaaa cagcaatgac acgtgtattt aatgattatg cacgtcgtat taatgaactt
     6481 aaaacaaaag ataaaaactt agatggtaat gatattcgtg aaggtttaac agctgttgtg
     6541 tctgttcgta ttccagaaga attattgcaa tttgaaggac aaacgaaatc taaattgggt
     6601 acttctgaag ctagaagtgc tgttgattca gttgttgcag acaaattgcc attctattta
     6661 gaagaaaaag gacaattgtc taaatcactt gtgaaaaaag cgattaaagc acaacaagca
     6721 agggaagctg cacgtaaagc tcgtgaagat gctcgttcag gtaagaaaaa caagcgtaaa
     6781 gacactttgc tatctggtaa attaacacct gcacaaagta aaaacactga aaaaaatgaa
     6841 ttgtatttag tcgaaggtga ttctgcggga ggttcagcaa aacttggacg agaccgcaaa
     6901 ttccaagcga tattaccatt acgtggtaag gtaattaata cagagaaagc acgtctagaa
     6961 gatattttta aaaatgaaga aattaataca attatccaca caatcggggc aggcgttggt
     7021 actgacttta aaattgaaga tagtaattat aatcgtgtaa ttattatgac tgatgctgat
     7081 actgatggtg cgcatattca agtgctattg ttaacattct tcttcaaata tatgaaaccg
     7141 cttgttcaag caggtcgtgt atttattgct ttacctccac tttataaatt ggaaaaaggt
     7201 aaaggcaaaa caaagcgagt tgaatacgct tggacagacg aagagcttaa taaattgcaa
     7261 aaagaacttg gtaaaggctt cacgttacaa cgttacaaag gtttgggtga aatgaaccct
     7321 gaacaattat gggaaacgac gatgaaccca gaaacacgaa ctttaattcg tgtacaagtt
     7381 gaagatgaag tgcgttcatc taaacgtgta acaacattaa tgggtgacaa agtacaacct
     7441 agacgtgaat ggattgaaaa gcatgttgag tttggtatgc aagaggacca aagtatttta
     7501 gataattctg aagtacaagt gcttgaaaat gatcaatttg atgaggagga aatctagtga
     7561 gtgaaataat tcaagattta tcacttgaag atgttttagg tgatcgcttt ggaagatata
     7621 gtaaatatat tattcaagag cgtgcattgc cagatgttcg tgatggttta aaaccagtac
     7681 aacgtcgtat tttatatgca atgtattcaa gtggtaatac acacgataaa aatttccgta
     7741 aaagtgcgaa aacagtcggt gatgttattg gtcaatatca tccacatgga gactcctcag
     7801 tgtacgaagc aatggtccgt ttaagtcaag actggaagtt acgacatgtc ttaatagaaa
     7861 tgcatggtaa taatggtagt atcgataatg atccgccagc ggcaatgcgt tacactgaag
     7921 ctaagttaag cttactagct gaagagttat tacgtgatat taataaagag acagtttctt
     7981 tcattccaaa ctatgatgat acgacactcg aaccaatggt attgccatca agatttccta
     8041 acttactagt gaatggttct acaggtatat ctgcaggtta cgcgacagat ataccaccac
     8101 ataatttagc tgaagtgatt caagcaacac ttaaatatat tgataatccg gatattacag
     8161 tcaatcaatt aatgaaatat attaaaggtc ctgattttcc aactggtggt attattcaag
     8221 gtattgatgg tattaaaaaa gcttatgaat caggtaaagg tagaattata gttcgttcta
     8281 aagttgaaga agaaacttta cgcaatggac gtaaacagtt aattattact gaaattccat
     8341 atgaagtgaa caaaagtagc ttagtaaaac gtatcgatga attacgtgct gacaaaaaag
     8401 tcgatggtat cgttgaagta cgtgatgaaa ctgatagaac tggtttacga atagcaattg
     8461 aattgaaaaa agatgtgaac agtgaatcaa tcaaaaatta tctttataaa aactctgatt
     8521 tacagatttc atataatttc aacatggtcg ctattagtga tggtcgtcca aaattgatgg
     8581 gtattcgtca aattatagat agttatttga atcaccaaat tgaggttgtt gcaaatagaa
     8641 cgaagtttga attagataat gcagaaaaac gtatgcatat cgttgaaggt ttgattaaag
     8701 cgttgtcaat tttagataaa gtaatcgaat tgattcgtag ctctaaaaac aagcgtgacg
     8761 ctaaagaaaa ccttatcgaa gtatacgagt tcacagaaga acaggctgaa gcaattgtaa
     8821 tgttacagtt atatcgttta acaaatactg acatagttgc gcttgaaggt gaacataaag
     8881 aacttgaagc attaatcaaa caattacgtc atattcttga taaccatgat gcattattga
     8941 atgtcataaa agaagaattg aatgaaatta aaaagaaatt caaatctgaa cgactgtctt
     9001 taattgaagc agaaattgaa gaaattaaaa ttgacaaaga agttatggtg cctagtgaag
     9061 aagttatttt aagtatgaca cgtcatggat atattaaacg tacttctatt cgtagcttta
     9121 atgctagcgg tgttgaagat attggtttaa aagatggtga cagtttactt aaacatcaag
     9181 aagtaaatac gcaagatacc gtactagtat ttacaaataa aggtcgttat ctatttatac
     9241 cggttcataa attagcagat attcgttgga aagaattggg acaacatgta tcacaaatag
     9301 ttcctatcga agaagatgaa gtggttatta atgtctttaa tgaaaaggac tttaatacag
     9361 atgcatttta tgtttttgcg actcaaaatg gcatgattaa gaaaagtaca gtgcctctat
     9421 ttaaaacaac gcgttttaat aaacctttaa ttgctactaa agttaaagaa aatgatgatt
     9481 tgattagtgt tatgcgcttt gaaaaagatc aattaattac cgtcattact aataaaggta
     9541 tgtcattaac gtataataca agtgaactat cagataccgg attaagggca gctggtgtta
     9601 aatcaataaa tcttaaagct gaagatttcg ttgttatgac agaaggtgtt tctgaaaatg
     9661 atactatatt gatggccaca caacgcggct cgttaaaacg tattagtttt aaaatcttac
     9721 aagttgctaa aagagcacaa cgtggaataa ctttattaaa agaattaaag aaaaatccac
     9781 atcgtattgt agctgcacat gtagtgacag gtgaacatag tcaatataca ttatattcaa
     9841 aatcaaatga agaacatggt ttaattaatg atattcataa atctgaacaa tatacaaatg
     9901 gctcattcat tgtagataca gatgattttg gtgaagtaat agacatgtat attagctaaa
     9961 aactatatgc aatcacgaaa ttaaatgata aaatacagta atgttaaatt ttgactaaat
    10021 tcaagggatt tatattaaat gctgaccaag tacttatcgt taaattagcg atatactttg
    10081 accaaactaa tataaatctc ttgtattgta taagaaatga tgatgtatct ctatatttac
    10141 tgaaggttca attcggtcta attttataga aggtacatga ttcatgtaga ggatgcgagg
    10201 ggtttatttt gaaagatttc gatagtttaa tacctggatg gtttaaagaa tttgtccatg
    10261 ttggtaccga tttaatatgg tctcaatatt taattggtct attattgaca gctggattct
    10321 tctttacgat tagttctaaa ttcgttcaat tacgaatgtt acctgaaatg tttagagctt
    10381 tagtagaacg tccagaaact ttagaagatg gtaagaaggg tatttcgcca ttccaagcat
    10441 ttgcgattag tgctggttcg agagttggta ctggtaatat tgctggtgtt gcgactgcga
    10501 ttgttttagg cggtccaggt gcagtatttt ggatgtgggt tattgcattt ataggtgcag
    10561 cgagtgcatt tatagaagcg actttggctc aggtttataa agtacatgat aaagatggtg
    10621 gattccgtgg tggtccagct tactatatta ctaaaggttt aaatcaaaaa tggctaggta
    10681 tcgtatttgc gattttaatt acaattacat ttgcatttgt atttaacaca gtgcaatcta
    10741 atacaattgc ggagtcgtta aatacgcaat ataatattag tccagtaatc acaggtatta
    10801 ttttagcaat cgtaacagct attattatat ttggtggtgt acgtagtatt gctacgttat
    10861 cttcgttaat tgtaccgatt atggctatca tttacattgg tatggtttta gtaatattgc
    10921 tatttaattt agatcaaatt gttcctatga taggtacgat tattaaaagt gcatttggta
    10981 tcgaacaagt aactggtggc gctgtaggtg ctgcggttct tcaaggtatc aaacgtggtt
    11041 tattctctaa cgaagctggt atgggttctg cgccgaatgc agcggcaact gctgccgtac
    11101 cacaccctgt taagcaaggt ttaatccaat cattaggtgt gttctttgat acaatgttgg
    11161 tttgtacagc aactgcaatc atgattttac tatattcagg actgaaattt ggtgataacg
    11221 cacctcaagg tgttgcagtt actcaatcag cacttaatga gcatttaggt tctgctggag
    11281 gtattttctt aacaatagca gttacactgt ttgcattttc atctgttgta ggtaattact
    11341 attacggtca atctaatatt gaatttttat caacaaaccg tgtaatatta tttatcttta
    11401 gatgtcttgt tgtagtactt gtctttgtcg gtgcagttgt aaaaacagaa acagtatgga
    11461 atacggcaga cttatttatg ggcttaatgg caattgtaaa cattatttcc attataggac
    11521 tgtccaatgt agcttttgca ttgatgaaag attatcaaaa gcagaaaaaa gaaggcaaga
    11581 accctgtctt taaacctgaa aacttagaaa ttaacttatt tggaattagt gcttggggcg
    11641 ctaacaaata taagaactct gataaataaa tatttttaat gtaacgattc attatataaa
    11701 aatcaaataa accctgaggt tttcaaatta aagcgaaaat ctcagggttt taaatttgta
    11761 ctcaattatc
//
LOCUS       DALPQQ010000079        11657 bp    DNA     linear   BCT 22-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus strain K18-6-464
            SAMD00233528-rid16434743.denovo.079, whole genome shotgun sequence.
ACCESSION   DALPQQ010000079 DALPQQ010000000
VERSION     DALPQQ010000079.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMD00233528
            Sequence Read Archive: DRR236061
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 11657)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11657)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001543423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001543423.1
            Genome Coverage       :: 77x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/22/2022 17:09:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,811
            CDSs (total)                      :: 2,743
            Genes (coding)                    :: 2,689
            CDSs (with protein)               :: 2,689
            Genes (RNA)                       :: 68
            rRNAs                             :: 2, 4, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 4, 2 (16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 54
            CDSs (without protein)            :: 54
            Pseudo Genes (ambiguous residues) :: 0 of 54
            Pseudo Genes (frameshifted)       :: 27 of 54
            Pseudo Genes (incomplete)         :: 27 of 54
            Pseudo Genes (internal stop)      :: 10 of 54
            Pseudo Genes (multiple problems)  :: 10 of 54
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11657
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMD00233528-rid16434743.denovo.079"
                     /strain="K18-6-464"
                     /db_xref="taxon:1280"
                     /geo_loc_name="Japan: Niigata"
     gene            533..1285
                     /locus_tag="O7798_001766"
     CDS             533..1285
                     /locus_tag="O7798_001766"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000503564.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="exotoxin"
                     /protein_id="HDC2864025.1"
                     /translation="MGEFEVKYLTGFILILLLEGIFTNSASAIEYSDLHHKSKFDSKR
                     LSNAKMSFINPTQLENKNTNDRLLKHDLLFHDMFVNDDWKKDFKVEFENEALSKKFIN
                     KDIDIFAGNYGYGCHGGATNKTQCSYGGVTLSDNNKYDDYKNIPCNLWIDGHQTEIEL
                     TAVKTKKKIVTIQELEVQLRNYLNEKYKLYEQGGDIVKGYVKYYNDDEQNVEYDFYNL
                     NGEYGREVLKMYADNKTINSDKLHLDIYLFKS"
     gene            complement(1487..1756)
                     /locus_tag="O7798_001767"
     CDS             complement(1487..1756)
                     /locus_tag="O7798_001767"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500214.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDC2864026.1"
                     /translation="MAENNQNSLVTKIATYGSFIAIASFVILFISIFLKFSFNIEFTA
                     TIMNICRYTLILGFILMSLPDVVDKNIKKIIFDAFIIIVFIFFLL"
     gene            2070..2756
                     /gene="mtnN"
                     /locus_tag="O7798_001768"
     CDS             2070..2756
                     /gene="mtnN"
                     /locus_tag="O7798_001768"
                     /EC_number="3.2.2.16"
                     /EC_number="3.2.2.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500212.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5'-methylthioadenosine/S-adenosylhomocysteine
                     nucleosidase"
                     /protein_id="HDC2864027.1"
                     /translation="MIGIIGAMEEEVTILKNKLTQLSEISVAHVKFYTGILKDREVVI
                     TQSGIGKVNAAISTTLLINKFKPDVIINTGSAGALDESLNVGDVLISDDVKYHDADAT
                     AFGYEYGQIPQMPVAFQSSKPLIEKVSQVVQQQQLTAKVGLIVSGDSFIGSVEQRQKI
                     KKAFPNAMAVEMEATAIAQTCYQFNVPFVVVRAVSDLANGEAEMSFEAFLEKAAVSSS
                     QTVEALVSQL"
     gene            2776..3303
                     /locus_tag="O7798_001769"
     CDS             2776..3303
                     /locus_tag="O7798_001769"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500211.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YqeG family HAD IIIA-type phosphatase"
                     /protein_id="HDC2864028.1"
                     /translation="MGLVRKFFMPNSYVQSIFQIDLDKLVDKGVKGIITDLDNTLVGW
                     DVKEPTERVKAWFKEANEKGITITIVSNNNESRVASFSQHLDIDFIFKARKPMGKAFD
                     KAITKMNIRPDQTVVIGDQMLTDVFGGNRRGLYTIMVVPVKRTDGFITKFNRLIERRL
                     LRHFSKKGYITWEEN"
     gene            3304..4404
                     /gene="yqeH"
                     /locus_tag="O7798_001770"
     CDS             3304..4404
                     /gene="yqeH"
                     /locus_tag="O7798_001770"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500210.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome biogenesis GTPase YqeH"
                     /protein_id="HDC2864029.1"
                     /translation="MSDILKCIGCGAPLQSEDKNKPGFVPEHNMFRDDVICRRCFRLK
                     NYNEVQDVGLESEDFLKLLSGLADKKGIVVNVVDVFDFEGSFINAVKRIVGNKKIILA
                     ANKLDLLPKQINKRRVKEWLKRTARKYGLEADDVVLISAEKGWGIDDLLSSIANIREN
                     EDVYIVGTTNVGKSTLINKLIEASVGEKDVVTTSRFPGTTLDMIDIPLDETSFMYDTP
                     GIIQDHQMTHLVSEKELKIIMPKKEIKQRVYQLNEAQTLFFGGLARIDYVSGGKRPLV
                     CFFSNDLNIHRTKTEKANDLWRNQLGDLLTPPGNPQNFDLNEVKAVRLETGKEKRDVM
                     ISGLGFITIGPGAKVIVRVPKNVDVVLRNSIL"
     gene            4418..5224
                     /gene="aroE"
                     /locus_tag="O7798_001771"
     CDS             4418..5224
                     /gene="aroE"
                     /locus_tag="O7798_001771"
                     /EC_number="1.1.1.25"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500209.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="shikimate dehydrogenase"
                     /protein_id="HDC2864030.1"
                     /translation="MKFAVIGNPISHSLSPVMHRANFNSLGLDDTYEALNIPIEDFHL
                     IKEIISKKELEGFNITIPHKERIIPYLDYVDEQAINAGAVNTVLIKDGKWIGYNTDGI
                     GYVKGLHSVYPDLENAYILILGAGGASKGIAYELAKFVKPKLTVANRTMARFESWNLN
                     INQISLADAEKYLAEFDIVINTTPAGMAGNNESIINLKHLSPNTLMSDIVYIPYKTPI
                     LEEAERKGNHIYNGLDMFVYQGAESFKIWTNKDADINSMKTAVLQQLKGE"
     gene            5228..5518
                     /gene="yhbY"
                     /locus_tag="O7798_001772"
     CDS             5228..5518
                     /gene="yhbY"
                     /locus_tag="O7798_001772"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500208.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome assembly RNA-binding protein YhbY"
                     /protein_id="HDC2864031.1"
                     /translation="MLTGKQKRYLRSLAHNIDPIFQIGKGGINENMIKQIDDTLENRE
                     LIKVHVLQNNFDDKKELAETLSEATHSELVQVIGSMIVIYRESKDNKEIELP"
     gene            5521..6090
                     /gene="nadD"
                     /locus_tag="O7798_001773"
     CDS             5521..6090
                     /gene="nadD"
                     /locus_tag="O7798_001773"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500207.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nicotinate (nicotinamide) nucleotide
                     adenylyltransferase"
                     /protein_id="HDC2864032.1"
                     /translation="MKKIVLYGGQFNPIHTAHMIVASEVFHELQPDEFYFLPSFMSPL
                     KKHHDFIDVQHRLTMIQMIIDELGFGDICDDEIKRGGQSYTYDTIKAFKEQHKDSELY
                     FVIGTDQYNQLEKWYQIEYLKEMVTFVVVNRDKNSQNVENAMIAIQIPRVDISSTMIR
                     QRVSEGKSIQVLVPKSVENYIKGEGLYEH"
     gene            6080..6664
                     /gene="yqeK"
                     /locus_tag="O7798_001774"
     CDS             6080..6664
                     /gene="yqeK"
                     /locus_tag="O7798_001774"
                     /EC_number="3.6.1.41"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500206.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bis(5'-nucleosyl)-tetraphosphatase (symmetrical)
                     YqeK"
                     /protein_id="HDC2864033.1"
                     /translation="MNIEKAKRLAKEKLPEKRYNHSLRVAETAIKLAEIYDGDTSKVE
                     LAGVLHDFCKYDDLGKMYQIVRQYELGNDLLSYGSEILHGPVCAAIMEHEYGINDEEV
                     LMAIKYHTTGRQQMTKTEKLIFIADYIEPGRTIPGVDDIRDMAYNQGSLDKTIYEISK
                     RTVLFLIQKDITVYNKTIDCLNYYNYSDERIKDD"
     gene            6665..7018
                     /gene="rsfS"
                     /locus_tag="O7798_001775"
     CDS             6665..7018
                     /gene="rsfS"
                     /locus_tag="O7798_001775"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500205.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome silencing factor"
                     /protein_id="HDC2864034.1"
                     /translation="MNSQELLAIAVDAIDNKKGEDTISLEMKGISDMTDYFVVTHGNN
                     ERQVQAIARAVKEVANEQNIEVKRMEGYNEARWILIDLADVVVHVFHKDERNYYNIEK
                     LYQDAPLESYSQVAY"
     gene            7021..7737
                     /locus_tag="O7798_001776"
     CDS             7021..7737
                     /locus_tag="O7798_001776"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500204.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HDC2864035.1"
                     /translation="MSQYAEMSLVYDQLTQDQPYEKWFEIVKNHCKDESNILDIGCGT
                     GSLTVQLEALGNVTGMDLSVDMLTVAAQKSANVNWLEGDMTSFDLQQQFDIITIFCDS
                     LNYLQDETAVIETFINVYHHLTDSGVFIFDVHTVYKMMTLFNNQSYIDDKGDIFLAWD
                     AVQGDLPLSVYHDMTFFIRHEDETYSRFDESHFQRTFDEKTYLSWLAQVGFKHVETFT
                     DFNIDEHNEDAERLFFIAKK"
     gene            7777..8463
                     /locus_tag="O7798_001777"
     CDS             7777..8463
                     /locus_tag="O7798_001777"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500203.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ComEA family DNA-binding protein"
                     /protein_id="HDC2864036.1"
                     /translation="MVLLYQFLLRYKDFLTQWKLYILSAVVLIMVLIGFIFWRQDDYT
                     SRNFENKDTALKQSTSENSSLSKVEDVQVKDGDNSKNKGPVYVDVKGAVKHPNVYKMT
                     SKDRVVDLLDKAQLLEDADVSQINLSEKLTDQKMIFIPHKGQKNVEPQIEVNSVHEKN
                     GNTNNTKVNLNTASVSELMSVPGVGQAKANAIVEYRNQQGAFQEIDDLKKVKGFGSKT
                     FDKLKSYFTT"
     gene            8555..9016
                     /locus_tag="O7798_001778"
     CDS             8555..9016
                     /locus_tag="O7798_001778"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000439692.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ComE operon protein 2"
                     /protein_id="HDC2864037.1"
                     /translation="MERIKWEEYFMAQSHLLALRSTCQRLSVGATIVKDNRIIAGGYN
                     GSVAGEVHCIDEGCLIEDGHCIRTIHAEMNALLQCAKQGVSTEGATIYVTHFPCLNCT
                     KSIIQAGIKRIYYAEDYHNHEYATKLLKQSGIEFKKIPFSPEYVAKYLTKG"
     gene            9021..11222
                     /locus_tag="O7798_001779"
     CDS             9021..11222
                     /locus_tag="O7798_001779"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001837660.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA internalization-related competence protein
                     ComEC/Rec2"
                     /protein_id="HDC2864038.1"
                     /translation="MLFVALSMIVGVLWNSSKVLSTFLFILLLYITYRKNKIVYAPIS
                     LFLIIFSAWYLHYSQQAIFNYINYIERNSQFNERAQVIQIQRQGSDTYKGRLSLKNEI
                     YPFFLTDKKNFDLKKIESRNCIVKGQFKVNDNKFVTLKLQSIVVQSCLESNRSNLIEK
                     HKQFIMNRIYDSGIKFPDRIMALITGDVKEVNEQFKERVKEIGIYHLLAVSGSHIAAI
                     VFLIYQPLKRLNLPLFVIKGITIIVLALFAQYTNYAPSAVRAIIMTTLVLVITKQIKI
                     KGIQLLAFAFIIMFILNPLVVYDIGFQFSFIISFFIMLLFPFLQQLSKLQSLFIITFI
                     AQLASFIVAIPSFHQLQWVGFLSNLIFVPYYSIILFPLSILFFITSHFIVGLTPLNYL
                     VDLSFNFHDWLLDLFTRIKQSHFSVPKFNDWIFIVFIISVYYIFWLLAKRKYILVTFW
                     TIIILTLLITFPTNSHHKITMLNVGQGDSILYEGGKNQNVLIDTGGKVIDDTKQPSYS
                     ISKYHILPTLNERGINELEYLILTHPHNDHIGEVEYIISHIKIKHIVIYNKGYSSNTL
                     MLLSKLSHKYNIKLMDVRQVSSFKLGDSSFLFFDSFIPNSRDKNEYSIITMITYQNKK
                     VLLMGDASKNNESLLLKKYNLPEIDILKVGHHGSKTSSSKEFIEMIKPKISLISSGKN
                     NMYHLPNIEVVKRLQRIRSRIYNSQQNGQVTIDLDDNLKVDSSSYGNASGL"
     gene            11279..>11657
                     /locus_tag="O7798_001780"
     CDS             11279..>11657
                     /locus_tag="O7798_001780"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500200.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit delta"
                     /protein_id="HDC2864039.1"
                     /translation="MSDNIVAIYGDVPELVEKQSAEIISQFLKSDRDDFNFVKYNLYE
                     TEIAPIVEETLTLPFFSDKKAILVKNAYIFTGEKAPKDMAHNVDQLIEFIEKYDGENL
                     IVFEIYQNKLDERKKLTKTLKKHA"
BASE COUNT         4308 a         1420 c         2106 g         3823 t
ORIGIN      
        1 taggaagagt aaaaattaat aatacaatta aaaaatatga taactactta gttaaaatta
       61 aaagtagacc aacaatttat gagataagtg atgaatttct aaattcgatt ataaaataaa
      121 tataatatgt gatcagctat acttatagta tttgtaagat cgcgtaattg cttcattgaa
      181 aaaatatatt tgttgagagt ggtgcatgac aaatgtactg ctctttttgt tgtgtatcag
      241 tattgtgatg ttttaatgag aatattatat gaatcattat gaaatttaat aaaaataaaa
      301 gaaatgatta tcattttttc ttatatactg ttaaacggtt tggaattttt aggtatacac
      361 tgtattggtt gatataactc aactaataat tgcgaacaga gtatttcaaa ttgaaaagta
      421 ttatgagcgt gatacataat caaaattgta ggctcaagaa ccactacata ataaaccata
      481 agcggttctt tatcatttat gtctcgctct caaatgtaaa ttaataattg ttttggggga
      541 gtttgaagtt aaatatttaa caggatttat tttaatatta ttgttagaag gaatttttac
      601 aaattcagcg agtgcaatcg aatattcaga cttacatcat aaaagtaagt ttgattcaaa
      661 gcgtctaagt aatgctaaga tgtcattcat caatccaact cagcttgaaa ataaaaacac
      721 aaacgataga ctgttgaagc atgatttgtt atttcatgac atgttcgtaa atgatgattg
      781 gaaaaaggat tttaaagttg aatttgaaaa tgaggcactt tcaaagaaat ttataaataa
      841 ggatatcgat atatttgctg gaaattatgg atacggatgt catgggggag caaccaataa
      901 aacgcaatgt agttatggtg gtgttacttt aagtgacaat aataaatacg atgattataa
      961 gaatatacct tgtaatttat ggattgacgg acatcaaaca gaaatagaac taactgcagt
     1021 aaaaacgaaa aagaaaattg ttactattca agaattagag gttcaattaa gaaattattt
     1081 gaatgagaag tataagttgt acgaacaagg tggcgacatt gttaaagggt atgttaaata
     1141 ttataatgat gatgaacaaa atgtagaata tgatttttat aatttaaatg gtgagtatgg
     1201 tcgtgaggta ttaaaaatgt atgctgataa taaaactatc aatagtgaca aattgcattt
     1261 agatatctat ttattcaaat cataatttaa ttaagttaat cattaataat ctttgacagt
     1321 gaaatataaa gtacctgtca ttatgttgtt acaaataaaa acagcagtaa ggatgctaac
     1381 acttagaaaa gtcttactgc tgttttctat tagaattatc tttaatgcac aaaggaattc
     1441 gatacgaaac aaatatgatt aactgtgtaa ttacaaaata aaactactat agtaaaaaga
     1501 agataaagac gatgataata aatgcatcga atataatttt cttgatgttt ttatcaacaa
     1561 catcaggtaa ggacataagt ataaatccta gaattagagt gtagcgacat atgttcataa
     1621 ttgttgctgt aaactcgata ttaaatgaaa actttaaaaa tatacttata aataaaatga
     1681 caaacgacgc aattgcaata aaactgccgt atgtagctat ctttgttacg agactatttt
     1741 gattattttc agccattgta aaatcctctt atttcatcat tattatttta aacatatcat
     1801 tttcctgtta tttaataaag tttcttgaca cgattggttg atgtaattga tatgattagt
     1861 ttttgaaaaa tagacaaatt agaagcatcg aattcactgt tatgagttca aaaataatta
     1921 tttatgatac caagttattg aaagagcttt ttataaaaat aaagcaaaag ttttatacag
     1981 taatgaaaat catgatactt gtcgttgtag tgattaaaat gtgataaaat aacaaatgct
     2041 aggatttttt aaaagaggtg aatcaaaaga tgattggtat aattggtgcc atggaagaag
     2101 aagtaacaat attaaaaaat aaattaacac aattaagcga aatttcagtt gcacatgtta
     2161 aattttatac tggcatttta aaagatagag aagtagtgat tacccaaagt ggcattggaa
     2221 aagttaatgc tgcaatttct acgacattat taattaataa gtttaaaccg gacgtcatta
     2281 ttaatacagg ttctgctgga gctttagatg aaagtttaaa tgtaggtgac gttcttataa
     2341 gtgatgatgt aaaatatcat gatgcagacg caacagcatt tggttatgaa tatggacaaa
     2401 taccacagat gccggtagca tttcaatcaa gtaaaccttt aatagaaaaa gtatctcaag
     2461 ttgtacaaca acaacaatta acagctaaag taggcttaat tgtaagtggt gatagcttta
     2521 tcggtagtgt tgaacaacgc caaaaaatta aaaaagcatt tccaaatgcg atggcggttg
     2581 aaatggaagc aactgcaatt gcacaaacat gttatcaatt taatgtacca tttgttgtag
     2641 ttcgtgcagt ttcagactta gcaaatggag aagcggaaat gagcttcgaa gcatttttag
     2701 aaaaagcagc tgtatcatca agtcaaactg ttgaagcatt agtgtctcaa ttataaaaag
     2761 gtaaaggtga gttaaatggg tttagttcgc aagtttttta tgccgaattc atatgttcaa
     2821 tcaatatttc aaattgattt agacaagtta gtggacaaag gcgttaaagg tattattaca
     2881 gatttagata atacgctagt aggttgggat gttaaagaac ctacagaacg tgttaaagca
     2941 tggtttaagg aagctaatga aaaaggaatc actattacaa tcgtgtctaa taataatgag
     3001 tctcgtgttg ctagttttag tcagcattta gacatcgatt ttatttttaa agcgagaaag
     3061 ccaatgggga aagcgtttga taaagcaata actaagatga atatcagacc agatcaaact
     3121 gttgttatag gtgaccaaat gcttactgat gtatttggtg gtaatcgtcg aggtctatat
     3181 acaattatgg ttgttccagt taaacgaact gatggcttta ttactaagtt taatagatta
     3241 attgaaagac gattattacg tcatttcagt aaaaaaggtt atatcacatg ggaggaaaat
     3301 tgattgtctg acattttaaa atgtatcggt tgtggtgcgc cacttcaatc tgaagataaa
     3361 aataaacctg gttttgtacc agagcataat atgtttcgtg atgacgtgat ttgcagacgt
     3421 tgtttccgct tgaaaaatta taacgaagtt caagatgtag gattagaaag tgaagacttt
     3481 ttaaaattat tatcaggact tgcggataaa aagggtattg tcgtcaatgt cgtggatgta
     3541 tttgactttg aaggatcatt tattaatgca gttaaacgta ttgtcggaaa caaaaaaatc
     3601 attttagcag caaataaatt ggatttattg ccgaaacaaa ttaataaacg tcgagttaaa
     3661 gaatggttaa aacgaacagc aagaaaatat ggtttggaag ctgacgatgt cgtattaatt
     3721 tcagctgaaa aaggctgggg catagacgac ttattatcat caattgcgaa tattcgagaa
     3781 aatgaagatg tgtatattgt agggacaacg aatgttggga aatctacatt gattaataaa
     3841 ctgattgaag ctagtgttgg tgaaaaagat gtagtaacaa cttcaagatt ccctggaaca
     3901 actttagata tgatagatat tcctttagat gaaacatcat ttatgtatga tacaccaggt
     3961 attattcaag atcaccaaat gacgcattta gttagtgaaa aagaattgaa aattattatg
     4021 cctaagaaag aaataaaaca acgcgtatat caattaaatg aggcgcagac attattcttc
     4081 ggcggtctag cgcgcataga ttatgtatca ggtggtaaac gtccgttagt ttgtttcttt
     4141 tctaatgact tgaatataca tcgtactaaa acggagaagg ctaatgattt atggcgtaat
     4201 caacttggcg atttattaac gccacctgga aatccacaaa attttgatct taatgaggta
     4261 aaggctgtta gacttgaaac aggcaaagag aaacgcgatg ttatgatctc tggtctaggc
     4321 tttataacta taggaccagg ggctaaagta atcgttcgtg ttcctaaaaa tgttgatgtt
     4381 gtattaagaa attctatttt ataaggtgat taaaaaaatg aaatttgcag ttataggaaa
     4441 tcctatttca cattccttgt cgcccgttat gcatagagca aattttaatt ctttaggatt
     4501 agatgatact tatgaagctt taaatattcc aattgaagat tttcatttaa ttaaagaaat
     4561 tatttcgaaa aaagaattag aaggctttaa tatcacaatt cctcataaag aacgtatcat
     4621 accgtattta gattatgttg atgaacaagc gattaatgca ggtgcagtta acactgtttt
     4681 gataaaagat ggcaagtgga tagggtataa tacagatggt attggttatg ttaaaggatt
     4741 gcacagcgtt tatccagatt tagaaaatgc atacatttta attttgggcg caggtggtgc
     4801 aagtaaaggt attgcttatg aattagcaaa atttgtaaag cccaaattaa ctgttgcgaa
     4861 tagaacgatg gctcgttttg aatcttggaa tttaaatata aaccaaattt cattagcaga
     4921 tgctgaaaag tatttagctg aattcgatat cgttattaat acaacaccag cgggtatggc
     4981 tggaaataac gaaagtatta ttaatttaaa gcatctttct cccaatactt taatgagtga
     5041 tattgtttat ataccgtata aaacacctat tttagaggaa gcagagcgca agggaaacca
     5101 tatttataat ggcttagata tgtttgttta ccagggtgcg gaaagcttta aaatttggac
     5161 taataaagat gctgatatta attctatgaa aacagcagtt ttacaacaat taaaaggaga
     5221 ataacatatg cttactggca aacaaaaaag atacttaaga agtttagcac acaatattga
     5281 tccgattttt caaattggaa aaggcggtat caacgaaaat atgattaaac aaatagatga
     5341 tacgttagaa aacagagaat tgattaaagt acatgtacta caaaataact ttgatgataa
     5401 aaaagaatta gctgaaacat taagcgaagc tactcatagt gaattagtgc aagtgattgg
     5461 atctatgata gtgatttata gagaatctaa agataataaa gaaattgaat tgccataata
     5521 atgaaaaaga tagtacttta cggcggtcag tttaacccta tccatactgc acatatgata
     5581 gtagctagcg aagtatttca tgaattacag ccagatgaat tttatttttt acctagtttt
     5641 atgtctccat tgaaaaagca ccatgatttt atagacgttc agcacagatt aacaatgata
     5701 cagatgatta tcgacgagct tggttttgga gatatttgtg acgatgaaat taaacgtggt
     5761 ggtcaaagtt atacctatga cacgatcaag gcattcaagg agcaacacaa agacagtgag
     5821 ttgtactttg ttattgggac ggatcagtat aaccaactag agaaatggta tcaaattgaa
     5881 tacttaaaag aaatggttac ttttgtagtt gtaaatcgag acaaaaatag tcaaaatgtt
     5941 gaaaatgcta tgattgcaat tcagatacct agggtagata taagttcgac aatgattcga
     6001 caaagagtta gtgaagggaa atctatccaa gttcttgttc ctaaatccgt tgaaaactat
     6061 attaaggggg aaggattata tgaacattga aaaagcaaaa cggcttgcaa aagagaaact
     6121 gccagagaaa cgttataatc attctttaag agttgcagaa acagcgatta aattggcaga
     6181 aatttatgat ggagacacta gtaaagtaga attagcaggt gtattacatg atttctgtaa
     6241 atatgatgat ttaggtaaaa tgtatcaaat tgttcgacaa tacgaattag gtaatgatct
     6301 actgagttat ggtagtgaaa tattgcatgg ccctgtgtgt gcagcaatca tggaacatga
     6361 atatggtatc aatgatgagg aagtattaat ggctatcaaa taccatacta ctggacgtca
     6421 acaaatgaca aaaactgaaa aactgatttt tattgcagat tacatcgaac ctggaagaac
     6481 aatcccagga gttgatgata ttcgagatat ggcatacaat caaggtagtt tagataagac
     6541 aatttatgaa atttctaaac gcacagtact atttttaata cagaaagata ttacggtata
     6601 taataagacg attgactgtt taaattatta taactatagt gacgaaagaa taaaggatga
     6661 ttaaatgaat tcacaagaat tattagcaat tgctgtggat gcaattgaca ataaaaaagg
     6721 cgaagatacg atttctttag aaatgaaagg tatcagcgat atgacagatt attttgttgt
     6781 aacgcacgga aataatgaac gacaagttca agcgattgct agagcggtga aagaagtagc
     6841 caatgaacaa aatatagaag taaaacgtat ggaaggatac aatgaagcgc gttggatatt
     6901 aattgactta gctgatgttg tggtacatgt tttccataaa gacgaaagaa attattataa
     6961 tattgaaaag ttatatcaag atgcaccatt agaatcatat agtcaggttg cgtattaatt
     7021 atgtcgcaat atgcagaaat gagcctagtg tacgatcaat tgactcaaga tcaaccatat
     7081 gaaaaatggt ttgaaattgt aaaaaatcac tgcaaagatg aatcaaatat tttagatatt
     7141 ggatgcggta ctggtagttt aacagttcaa ttagaagctt taggtaatgt tactggtatg
     7201 gatttaagtg ttgatatgtt gactgttgca gctcaaaaat cagcaaatgt aaattggctt
     7261 gaaggagata tgacatcttt tgatttgcaa caacaatttg atatcatcac tattttttgt
     7321 gactctctaa attatttgca agatgaaact gcagtgattg aaacattcat caatgtttat
     7381 catcatctga ctgattcagg tgtatttatt tttgatgtac atactgttta taaaatgatg
     7441 actttgttta ataatcaaag ttatattgat gataaagggg acattttttt agcatgggat
     7501 gctgtgcaag gagatttacc tttaagtgtt tatcatgata tgacattttt cattcgacat
     7561 gaagatgaaa catattcaag atttgatgag tctcattttc agagaacatt tgatgaaaag
     7621 acatatttgt cttggttagc tcaagttggt tttaaacatg ttgaaacatt tactgatttt
     7681 aatatagatg aacataatga agatgcagaa agattgtttt tcattgcgaa aaaataaaag
     7741 taaaaccact cgctcagacg tgtataaagt tgaggagtgg ttttattgta tcaattttta
     7801 ttacgctata aagatttttt aactcaatgg aagttatata ttctaagtgc tgttgtttta
     7861 attatggtat taattggttt tatattctgg agacaagatg attatacttc aagaaatttt
     7921 gaaaataaag atactgctct gaaacaaagc actagtgaaa atagtagttt gtccaaagta
     7981 gaagatgtcc aggtcaaaga tggagataat tccaaaaata agggtcctgt atatgtcgat
     8041 gtaaaaggtg ctgttaaaca tcctaatgtt tataaaatga catctaagga tagagtagtt
     8101 gatttacttg ataaagcaca attattggag gatgcagatg taagtcaaat taatttgtct
     8161 gaaaaattaa cagatcaaaa aatgattttc atacctcata aaggacaaaa gaatgttgaa
     8221 ccacaaattg aagtaaacag tgtgcacgaa aaaaatggga acacaaataa tactaaagta
     8281 aatttaaata cggcatctgt atcagaattg atgtctgttc ctggagttgg gcaagctaaa
     8341 gctaatgcaa ttgttgaata tcgcaaccaa caaggtgcat ttcaagaaat tgacgatttg
     8401 aaaaaagtaa aaggttttgg aagtaaaact tttgataaac tgaaatctta tttcacgaca
     8461 taatggatta ttttaattgc aaattttatt ttttgtgatt aatcttatat tattagaaaa
     8521 tgttactaaa ttttaagtat ggaaggtgaa catcttggaa agaatcaaat gggaagaata
     8581 ttttatggca caaagtcatt tgctagcatt acgttcaact tgtcaaagat tatctgtagg
     8641 tgcaacgatt gttaaggata atcgtattat tgctggtggt tataatggct ctgtagctgg
     8701 cgaggtgcat tgtatagatg aaggatgttt aattgaagat ggacattgta tcagaacgat
     8761 acatgcagaa atgaatgctt tattacaatg tgcaaaacaa ggtgtatcta ctgaaggtgc
     8821 aacaatctat gttactcatt ttccatgcct aaattgtaca aagtcaatta ttcaagcagg
     8881 tataaagcgt atctactatg cagaagatta tcataaccat gaatatgcaa ctaaattact
     8941 caaacaatct ggtattgaat ttaaaaaaat tccattttca ccagaatatg ttgctaaata
     9001 tctgactaaa ggttaatgtt ttgctgtttg tcgcgttatc aatgattgta ggagtgcttt
     9061 ggaattctag caaagtgctc tctacatttc ttttcatttt acttttgtat attacttatc
     9121 gtaaaaataa aatcgtttat gcccctattt ctctcttttt aatcattttc tccgcatggt
     9181 atttacatta ttcacaacaa gcaatattta attatatcaa ttatattgaa cgtaattctc
     9241 agtttaatga gcgtgctcaa gtaatccaaa ttcaacgtca aggtagtgac acatataaag
     9301 gtaggttgag tttaaaaaat gaaatatatc ctttcttttt aacagataaa aagaattttg
     9361 atttaaagaa aattgaaagt cgtaattgta ttgttaaagg acaattcaaa gttaatgaca
     9421 ataagtttgt aactcttaaa ttacaaagta tagttgtaca aagctgccta gaatcgaacc
     9481 ggtctaattt aattgagaaa cataaacagt ttataatgaa tcgaatttat gattcgggta
     9541 ttaagtttcc ggatcgtatt atggcattga ttactggtga cgtaaaagaa gttaatgagc
     9601 aatttaagga acgtgttaaa gagataggta tatatcattt gctggcagtt agtggctcgc
     9661 atatagctgc aattgtattt ttaatttacc aacctttaaa acgattaaat ttacctttat
     9721 ttgtcattaa aggaattaca atcattgtat tagctttatt tgctcaatac acaaattatg
     9781 cacctagtgc tgtaagagct ataataatga caactcttgt actggttatt actaagcaaa
     9841 ttaaaataaa gggtattcag ctattagcat ttgcatttat aattatgttt attttaaatc
     9901 cactagttgt ttatgatatt ggatttcaat tttcattcat catttcattt tttattatgc
     9961 tactttttcc ttttttacag caattgtcaa agttacaatc attattcata attacgttta
    10021 ttgcacaatt agcttcattt atcgttgcca ttccaagctt tcatcaactt caatgggtgg
    10081 gatttttatc taatttgatt tttgtaccgt actattcgat tatattgttt ccgctatcta
    10141 ttttattctt tattacaagt cattttattg tgggattaac gccgctaaat tacttggttg
    10201 acctaagttt taattttcat gactggttac tagacctatt cacaagaatc aagcaatcac
    10261 atttttctgt tcccaagttt aatgattgga tatttatagt atttataatt tctgtttatt
    10321 acatattttg gttattggct aaacgtaaat atatattggt tacgttttgg actataatta
    10381 ttctgacatt attaataacg tttccaacaa attcacatca caaaattaca atgttaaatg
    10441 tggggcaggg agacagtatt ttatatgaag gcggtaagaa ccaaaatgtc ttgattgata
    10501 caggtgggaa agtgattgat gatactaaac aacctagtta ttcaatttct aaatatcata
    10561 ttttaccaac gctaaatgaa agagggataa atgaattaga gtatctaatt ttaacacatc
    10621 cacacaatga ccatattggt gaagtggaat atattattag tcatattaaa attaaacata
    10681 tagtgatata caataaggga tatagtagta atacattgat gttattatcg aaattaagcc
    10741 ataagtacaa cattaaactt atggatgtaa gacaagttag tagttttaaa cttggagata
    10801 gtagttttct attttttgat agttttattc caaatagccg agataaaaat gagtattcga
    10861 ttattactat gattacatat caaaataaaa aagttttatt aatgggcgat gctagtaaaa
    10921 ataatgaatc tttactacta aaaaaatata acttgccgga gattgatatt ttaaaagtag
    10981 gacatcatgg gagcaagaca agtagttcta aagaatttat agagatgatt aagcctaaaa
    11041 taagtttgat ttcttctggg aagaacaata tgtatcatct tcctaatata gaagttgtta
    11101 aacgattgca aaggattcgc agtcgcattt acaatagtca acaaaacggt caagttacaa
    11161 ttgacttaga tgataattta aaagttgatt caagctctta tggaaatgca agtggtttat
    11221 agatacagaa acatgatata atctattgat gtgtcaaacg aatgaaaggg tgtaatgaat
    11281 gagcgacaat attgtagcta tttatggaga tgtgcctgaa ttggttgaaa aacaaagtgc
    11341 agaaatcata tcacaatttt tgaaaagtga tagagatgac tttaactttg tgaaatataa
    11401 tttatacgaa acagagattg caccaattgt tgaagaaaca ttaacattgc ctttcttttc
    11461 agataaaaaa gcaattttgg ttaaaaatgc atatatattt acaggtgaaa aagcgccaaa
    11521 agatatggct cataatgtag atcaattaat agaatttatt gaaaaatatg atggcgaaaa
    11581 tttgattgtc tttgagatat atcaaaataa acttgatgaa agaaaaaagt taactaaaac
    11641 tctaaaaaag catgcaa
//
LOCUS       DALPQQ010000080        11602 bp    DNA     linear   BCT 22-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus strain K18-6-464
            SAMD00233528-rid16434743.denovo.080, whole genome shotgun sequence.
ACCESSION   DALPQQ010000080 DALPQQ010000000
VERSION     DALPQQ010000080.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMD00233528
            Sequence Read Archive: DRR236061
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 11602)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11602)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001543423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001543423.1
            Genome Coverage       :: 77x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/22/2022 17:09:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,811
            CDSs (total)                      :: 2,743
            Genes (coding)                    :: 2,689
            CDSs (with protein)               :: 2,689
            Genes (RNA)                       :: 68
            rRNAs                             :: 2, 4, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 4, 2 (16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 54
            CDSs (without protein)            :: 54
            Pseudo Genes (ambiguous residues) :: 0 of 54
            Pseudo Genes (frameshifted)       :: 27 of 54
            Pseudo Genes (incomplete)         :: 27 of 54
            Pseudo Genes (internal stop)      :: 10 of 54
            Pseudo Genes (multiple problems)  :: 10 of 54
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11602
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMD00233528-rid16434743.denovo.080"
                     /strain="K18-6-464"
                     /db_xref="taxon:1280"
                     /geo_loc_name="Japan: Niigata"
     gene            67..222
                     /locus_tag="O7798_001781"
     CDS             67..222
                     /locus_tag="O7798_001781"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500762.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDC2864040.1"
                     /translation="MIIHCSIVSNFIFNLYIITNFNLNFLSLKQIIYSKLIVRKFKIF
                     VDILKQI"
     gene            540..2228
                     /gene="ilvD"
                     /locus_tag="O7798_001782"
     CDS             540..2228
                     /gene="ilvD"
                     /locus_tag="O7798_001782"
                     /EC_number="4.2.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500763.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydroxy-acid dehydratase"
                     /protein_id="HDC2864041.1"
                     /translation="MRSDMIKKGDHQAPARSLLHATGALKSPTDMNKPFVAICNSYID
                     IVPGHVHLRELADIAKEAIREAGAIPFEFNTIGVDDGIAMGHIGMRYSLPSREIIADA
                     AETVINAHWFDGVFYIPNCDKITPGMILAAMRTNVPAIFCSGGPMKAGLSAHGKALTL
                     SSMFEAVGAFKEGSISKEEFLDMEQNACPTCGSCAGMFTANSMNCLMEVLGLALPYNG
                     TALAVSDQRREMIRQAAFKLVENIKNDLKPRDIVTREAIDDAFALDMAMGGSTNTVLH
                     TLAIANEAGIDYDLERINAIAKRTPYLSKIAPSSSYSMHDVHEAGGVPAIINELMKKD
                     GTLHPDRITVTGKTLRENNEGKEIKNFDVIHPLDAPYDAQGGLSILFGNIAPKGAVIK
                     VGGVDPSIKTFTGKAICFNSHDEAVEAIDNRTVRAGHVVVIRYEGPKGGPGMPEMLAP
                     TSSIVGRGLGKDVALITDGRFSGATRGIAVGHISPEAASGGPIALIEDGDEITIDLTN
                     RTLNVNQPEDVLARRRESLTPFKAKVKTGYLARYTALVTSANTGGVMQVPENLI"
     gene            2256..4025
                     /gene="ilvB"
                     /locus_tag="O7798_001783"
     CDS             2256..4025
                     /gene="ilvB"
                     /locus_tag="O7798_001783"
                     /EC_number="2.2.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500764.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="biosynthetic-type acetolactate synthase large
                     subunit"
                     /protein_id="HDC2864042.1"
                     /translation="MSKTQHEVNQNIDPLKMAESLEPEQLNEKTLNDMRSGSEVLVEA
                     LLKENVDYLFGYPGGAVLPLYDTFYDGKIKHILARHEQGAVHAAEGYARVSGKTGVVV
                     VTSGPGATNVMTGITDAHCDSLPLVVFTGQVATPGIGKDAFQEADILSMTSPITKQNY
                     QVKRVEDIPKIVHEAFHVANSGRKGPVVIDFPKDMGVLATNVDLCDEINIPGYEVVTE
                     PENKDIDTFISLLKEAKKPVVLAGAGINQSKSNQLLTQFVNKHQIPTVTTLLGLGAVP
                     YEDTLFLGMGGMHGSYASNMALTECDLLINLGSRFDDRLASKPDAFAPNAKIVHVDID
                     PSEINKVIHVDLGIIADCKRFLECLNDKNVETIEHSDWVKHCQNNKQKHPFKLGEEDQ
                     VFCKPQQTIEYIGKITNGEAIVTTDVGQHQMWAAQFYPFKNHGQWVTSGGLGTMGFGI
                     PSSIGAKLANPDKTVVCFVGDGGFQMTNQEMALLPEYGLDVKIVLINNGTLGMVKQWQ
                     DKFFNQRFSHSVFNGQPDFMKMAEAYGVKGFLIDKPEQLEEQLDAAFAYQGPALIEVR
                     ISPTEAVTPMVPSGKSNHEMEGL"
     gene            4025..4279
                     /locus_tag="O7798_001784"
     CDS             4025..4279
                     /locus_tag="O7798_001784"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500765.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ACT domain-containing protein"
                     /protein_id="HDC2864043.1"
                     /translation="MTRILKLQVADQVSTLNRITSAFVRLQYNIDTLHVTHSEQPGIS
                     NMEIQVDIQDDTSLHILIKKLKQQINVLTVECYDLVDNEA"
     gene            4416..5420
                     /gene="ilvC"
                     /locus_tag="O7798_001785"
     CDS             4416..5420
                     /gene="ilvC"
                     /locus_tag="O7798_001785"
                     /EC_number="1.1.1.86"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500766.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ketol-acid reductoisomerase"
                     /protein_id="HDC2864044.1"
                     /translation="MTTVYYDQDVKTDALQGKKIAVVGYGSQGHAHAQNLKDNGYDVV
                     IGIRPGRSFDKAKEDGFDVFPVAEAVKQADVIMVLLPDEIQGDVYKNEIEPNLEKHNA
                     LAFAHGFNIHFGVIQPPADVDVFLVAPKGPGHLVRRTFVEGSAVPSLFGIQQGASGQA
                     RNIALSYAKGIGATRAGVIETTFKEETETDLFGEQAVLCGGVSKLIQSGFETLVEAGY
                     QPELAYFEVLHEMKLIVDLMYEGGMENVRYSISNTAEFGDYVSGPRVITPDVKENMKA
                     VLTDIQNGNFSNRFIEDNKNGFKEFYKLREEQHGHQIEKVGRELREMMPFIKSKSIEK
                     "
     gene            5450..6979
                     /locus_tag="O7798_001786"
     CDS             5450..6979
                     /locus_tag="O7798_001786"
                     /EC_number="2.3.3.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500767.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-isopropylmalate synthase"
                     /protein_id="HDC2864045.1"
                     /translation="MSSHIQIFDTTLRDGEQTPGVNFTFDERLRIALQLEKWGVDVIE
                     AGFPASSTGSFKSVQAIAQTLTTTAVCGLARCKKSDIDAVYEATKDAAKPVVHVFIAT
                     SPIHLEHKLKMSQEDVLASIKEHVTYAKQLFDVVQFSPEDATRTELPFLVKCVQTAVD
                     AGATVINIPDTVGYSYHDEYAHIFKTLTESVTSSNEIIYSAHCHDDLGMAVSNSLAAI
                     EGGARRIEGTVNGIGERAGNAALEEVALALYVRNDHYGAQTALNLEETKKTSDLISRY
                     AGIRVPRNKAIVGQNAFSHESGIHQDGVLKHRETYEIMTPQLVGVSTTELPLGKLSGK
                     HAFSEKLKALGYDIDKEAQIDLFKQFKAIADKKKSVSDRDIHAIIQGSEHEHQALYKL
                     ETLQLQYVSSGLQSAVVVVKDKEGHIYQDSSIGTGSIVAIYNAVDRIFQKETELIDYR
                     INSVTEGTDAQAEVHVNLLIEGKTVNGFGIDHDILQASCKAYVEAHAKFAAENVEKVG
                     N"
     gene            6982..8028
                     /gene="leuB"
                     /locus_tag="O7798_001787"
     CDS             6982..8028
                     /gene="leuB"
                     /locus_tag="O7798_001787"
                     /EC_number="1.1.1.85"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500768.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-isopropylmalate dehydrogenase"
                     /protein_id="HDC2864046.1"
                     /translation="MTYNIVALPGDGIGPEILNGSLSLLEIISNKYNFNYQIEHHEFG
                     GASIDTFGEPLTEKTLNACKRADAILLGAIGGPKWTDPNNRPEQGLLKLRKSLNLFVN
                     IRPTTVVKGASSLSPLKEERVEGTDLVIVRELTSGIYFGEPRHFNNHEALDSLTYTRE
                     EIERIVHVAFKLAASRRGKLTSVDKENVLASSKLWRKVVNEVSQLYPEVTVNHLLVDA
                     CSMHLITNPKQFDVIVCENLFGDILSDEASVIPGSLGLSPSASFSNDGPRLYEPIHGS
                     APDIAGKNVANPFGMILSLAMCLRESLNQPDAADELEQHIYSMIEHGQTTADLGGKLN
                     TTDIFEILSQKLNH"
     gene            8042..9409
                     /gene="leuC"
                     /locus_tag="O7798_001788"
     CDS             8042..9409
                     /gene="leuC"
                     /locus_tag="O7798_001788"
                     /EC_number="4.2.1.33"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500769.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-isopropylmalate dehydratase large subunit"
                     /protein_id="HDC2864047.1"
                     /translation="MGQTLFDKVWNRHVLYGKLGEPQLLYIDLHLIHEVTSPQAFEGL
                     RLQNRKLRRPDLTFATLDHNVPTIDIFNIKDEIANKQITTLQKNAIDFGVHIFDMGSD
                     EQGIVHMVGPETGLTQPGKTIVCGDSHTATHGAFGAIAFGIGTSEVEHVFATQTLWQT
                     KPKNLKIDINGTLPTGVYAKDIILHLIKTYGVDFGTGYALEFTGETIKNLSMDGRMTI
                     CNMAIEGGAKYGIIQPDDITFEYVKGRPFADNFAKSVDKWRELYSDDDAIFDRVIELD
                     VSTLEPQVTWGTNPEMGVNFSEPFPEINDINDQRAYDYMGLEPGQKAEDIDLGYVFLG
                     SCTNARLSDLIEASHIVKGNKVHPNITAIVVPGSRTVKKEAEKLGLDTIFKNAGFEWR
                     EPGCSMCLGMNPDQVPEGVHCASTSNRNFEGRQGKGARTHLVSPAMAAAAIHGKFVDV
                     RKVVV"
     gene            9410..9982
                     /gene="leuD"
                     /locus_tag="O7798_001789"
     CDS             9410..9982
                     /gene="leuD"
                     /locus_tag="O7798_001789"
                     /EC_number="4.2.1.33"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500770.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-isopropylmalate dehydratase small subunit"
                     /protein_id="HDC2864048.1"
                     /translation="MAAIKPITTYKGKIVPLFNDNIDTDQIIPKVHLKRISKSGFGPF
                     AFDEWRYLPDGSDNPDFNPNKPQYKGASILITGDNFGCGSSREHAAWALKDYGFHIII
                     AGSFSDIFYMNCTKNAMLPIVLEKSAREHLAQYVEIEVDLPNQTVSSPDKRFHFEIDE
                     TWKNKLVNGLDDIAITLQYESLIEKYEKSL"
     gene            9997..11265
                     /gene="ilvA"
                     /locus_tag="O7798_001790"
     CDS             9997..11265
                     /gene="ilvA"
                     /locus_tag="O7798_001790"
                     /EC_number="4.3.1.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500771.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="threonine ammonia-lyase IlvA"
                     /protein_id="HDC2864049.1"
                     /translation="MTVKTTVSTKDIDEAFLRLKDIVKETPLQLDHYLSQKYDCKVYL
                     KREDLQWVRSFKLRGAYNAISVLSDEAKSKGITCASAGNHAQGVAYTAKKLNLNAVIF
                     MPVTTPLQKVNQVKFFGNSNVEVVLTGDTFDHCLAEALTYTSEHQMNFIDPFNNVHTI
                     SGQGTLAKEMLEQAKSDNVNFDYLFAAIGGGGLISGISTYFKTYSPTTKIIGVEPSGA
                     SSMYESVVVNNQVVTLPNIDKFVDGASVARVGDITFEIAKENVDDYVQVDEGAVCSTI
                     LDMYSKQAIVAEPAGALSVSALENYKDHIKGKTVVCVISGGNNDINRMKEIEERSLLY
                     EEMKHYFILNFPQRPGALREFVNDVLGPQDDITKFEYLKKSSQNTGTVIIGIQLKDHD
                     DLIQLKQRVNHFDPSNIYINENKMLYSLLI"
     gene            complement(11475..11589)
                     /gene="rrf"
                     /locus_tag="O7798_001791"
     rRNA            complement(11475..11589)
                     /gene="rrf"
                     /locus_tag="O7798_001791"
                     /product="5S ribosomal RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00001"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00001"
BASE COUNT         3909 a         1915 c         2219 g         3559 t
ORIGIN      
        1 atttcatcta aattatttat ctttatcaat gttgattctc ctatattatg cttttcattc
       61 ataaaaatga ttatccattg ttcaatcgta tctaacttta tatttaacct ttatattata
      121 acaaatttca acttaaattt cttatctttg aaacagatta tctattcaaa gttaattgta
      181 agaaaattta aaatatttgt tgacatacta aagcagatat agtaaattga atttatcaaa
      241 tttttagaca attctaacta ttaaagtgat atataccatt cacggaagga gtataataaa
      301 atgcttaatc aatatactga acatcaaccg acaacttcaa atattattat tttattatac
      361 tctttaggac tcgaacgtta gtaaatattt actaaacgct ttaagtccta tttctgtttg
      421 aatgggactt gtaaacgtcc caataatatt gggacgtttt tttatgtttt atctttcaat
      481 tacttatttt tattactata aaacatgatt aatcattaaa atttacgggg gaatttacta
      541 tgcgaagcga catgatcaaa aaaggagatc accaagcacc agcaagaagt cttttacatg
      601 ccacgggcgc gctaaaaagt ccaactgata tgaacaaacc atttgtagct atttgtaact
      661 cttatattga tattgttcct ggacatgttc acttgagaga gcttgcagat atagctaaag
      721 aagcaattag agaagccggt gccattccat ttgaattcaa tacaattggt gttgatgatg
      781 gaatagctat gggacatatc ggaatgcgat attctctacc atcacgtgaa attattgcag
      841 atgcagctga aactgtaatt aacgctcatt ggtttgacgg cgtattttac attcctaatt
      901 gtgacaagat tacacccggt atgattttag cagccatgag gacaaacgta ccagctatct
      961 tttgctctgg tggaccaatg aaagctggct tatctgcaca tggaaaagca ttaacacttt
     1021 catcaatgtt tgaagcagtc ggcgcattta aagaaggatc gatttctaaa gaagaatttt
     1081 tagatatgga acaaaatgcc tgccctactt gtggttcatg tgctgggatg tttactgcaa
     1141 attcaatgaa ctgtttgatg gaagttttag gtctagcatt accatacaac ggtactgcac
     1201 ttgcagtcag tgatcagcga cgagaaatga ttcgccaagc agcttttaaa ttagttgaaa
     1261 atattaaaaa tgatttaaaa ccacgtgata tcgttactcg cgaagcaatt gatgatgcat
     1321 ttgcacttga tatggctatg ggtggttcaa caaacacggt actgcatacg ttagccattg
     1381 ccaatgaagc tggtattgat tatgacttag agcgcattaa tgctattgcc aaacgcacgc
     1441 catatttatc aaaaatagca cctagttcat cgtattcaat gcatgatgtg catgaagctg
     1501 gtggcgtccc agcaattatt aatgaattga tgaagaaaga tggcacgtta cacccagata
     1561 gaatcacagt tactggcaaa acgttacgtg aaaataacga aggcaaagaa attaagaact
     1621 ttgatgtcat tcaccctctt gatgcaccat atgatgcaca aggcggttta tctatcttat
     1681 ttggtaatat cgcccctaaa ggcgcagtta ttaaagttgg cggcgttgat ccatctatca
     1741 aaacatttac tgggaaagca atttgtttca attcgcatga tgaagctgtt gaagcaatag
     1801 acaatcgtac cgttcgtgca ggccacgtcg ttgtcattag atatgaagga cctaaaggtg
     1861 gaccaggtat gcctgaaatg ttagcaccta cttcctctat tgttggtcgc ggcttaggta
     1921 aagatgttgc attaattact gatgggcgtt tttccggtgc cacaagaggt attgcagttg
     1981 gtcatatttc ccctgaagct gcatctggtg gaccaattgc cttaattgaa gatggtgatg
     2041 agattactat tgatttaaca aatcgtacat taaacgtaaa ccagcctgaa gatgttctag
     2101 cgcgtcgccg agaatcttta acaccattta aagcgaaagt aaaaacaggt tatctagctc
     2161 gttatactgc cctagtaact agcgcaaata caggtggcgt catgcaagtc cctgagaatt
     2221 taatttaatt tatttttata ttggagatgg ttaaaatgtc taaaactcaa catgaagtaa
     2281 accaaaatat tgacccttta aaaatggctg aatcacttga acctgaacaa ctaaatgaaa
     2341 aaactttaaa tgatatgcgt tcaggatcag aagtgctagt agaagctcta cttaaagaaa
     2401 atgtggatta tttattcggt tatcctggtg gtgccgtact acctttatat gacacgtttt
     2461 atgatggtaa aatcaaacat attttagcaa gacacgaaca aggtgctgtt catgctgcag
     2521 aaggttatgc acgtgtatct ggtaaaactg gcgtcgttgt agttacaagc ggtccaggtg
     2581 caactaatgt aatgacaggt attacggatg cacattgcga ctctttacct ctagttgtat
     2641 tcactggaca agttgctaca ccaggcattg gtaaagatgc attccaagaa gcggatattc
     2701 tatctatgac ttcaccaatt acaaaacaaa attatcaagt gaaacgtgtt gaagatatcc
     2761 ctaaaatcgt acacgaagct ttccatgtag ctaattctgg acgcaaaggt cctgtagtga
     2821 ttgattttcc aaaagatatg ggtgttttag ctacaaatgt ggatttatgc gacgaaatca
     2881 atattccagg ttatgaagtt gttacagaac cagaaaataa agacattgac actttcatct
     2941 cacttttaaa agaagcgaaa aagcctgtcg tattagccgg cgcaggtatt aatcaatcaa
     3001 aatcaaatca attattaaca cagtttgtta ataaacatca aatcccaaca gttactactt
     3061 tactaggtct aggtgctgta ccttatgagg atacactatt tttaggtatg ggaggaatgc
     3121 atggttctta tgctagtaac atggcattaa ctgagtgtga tttactcatt aatttaggta
     3181 gccgcttcga tgatagatta gcaagcaaac ctgatgcctt tgcacctaac gccaaaattg
     3241 tacatgtaga tattgatcct tcagaaatca ataaagttat tcatgtagat ttaggtatta
     3301 ttgcagactg taaaagattt ttagaatgtt taaatgataa aaatgttgag actatagaac
     3361 acagtgactg ggttaaacat tgtcaaaata ataagcagaa acacccattt aaacttggtg
     3421 aagaagatca agtattttgt aagccacaac aaacaatcga atatatcggc aaaattacaa
     3481 atggtgaagc aattgttact acagacgtgg gacaacatca aatgtgggca gctcaatttt
     3541 atccatttaa aaatcacgga caatgggtta caagcggtgg tttaggaaca atgggattcg
     3601 gtattccttc gtcaattggt gccaaattag ctaatcctga taaaacagtc gtatgtttcg
     3661 tcggtgacgg tggtttccaa atgacaaacc aagaaatggc acttttaccc gaatatggtt
     3721 tagatgtcaa aatcgtacta atcaataatg gaacattagg tatggttaaa caatggcaag
     3781 ataagttctt taatcaacgc ttctcacact cagtatttaa tggtcaacct gattttatga
     3841 aaatggcaga agcatatggc gtcaaaggtt tcttaatcga taagccagaa caactggaag
     3901 aacaattaga tgcagcgttt gcttatcaag gaccagcttt aattgaggtt cgtatttccc
     3961 ctactgaagc tgtaacccca atggttccga gtggcaaatc aaatcatgaa atggagggct
     4021 tataatgaca agaattctta aattacaagt tgcggatcaa gtcagcacgc taaatcgaat
     4081 tacaagtgct tttgttcgcc tacaatataa tatcgataca ttacatgtta cacattctga
     4141 acaacctggg atttctaaca tggaaattca agtcgatatt caagatgata catcacttca
     4201 tatattaatt aaaaaattaa aacaacaaat taatgtttta acggttgaat gctacgacct
     4261 tgttgataac gaagcttaat tttaagacaa aggcaatgat gcgctaatta gttatagata
     4321 tatcataggc tgctagttaa catctgccac tattacaaag ttatatttca gaattttcga
     4381 aacacaaaat atttaattat ttggaggaat ttattatgac aacagtttat tatgatcaag
     4441 atgtaaaaac ggacgcttta caaggcaaaa aaattgcagt agtaggttat ggatcacaag
     4501 gtcacgcgca tgcacaaaac ttaaaagaca atggatatga tgtagtcatc ggcattcgcc
     4561 caggtcgttc ttttgacaaa gctaaagaag atggatttga tgtgttccct gttgcagaag
     4621 cagttaagca agctgatgta attatggtgc tattacctga tgaaattcaa ggtgatgtat
     4681 acaaaaacga aattgaacca aatttagaaa aacataatgc gcttgcattt gctcatggct
     4741 ttaacattca ttttggtgtt attcaaccac cagctgatgt tgatgtattt ttagtagctc
     4801 ctaaaggacc gggtcattta gttagacgta catttgttga aggttctgct gtaccatcac
     4861 tatttggtat tcaacaaggc gcttcaggtc aagcacgtaa tattgcttta agttatgcaa
     4921 aaggtattgg tgcaactcgt gcaggtgtta ttgaaacaac atttaaagaa gaaactgaga
     4981 cagatttatt tggtgaacaa gcagtacttt gcggtggtgt atcgaaatta attcaaagtg
     5041 gctttgaaac attagtagaa gcgggttatc aaccagaatt agcttatttt gaagtattac
     5101 atgaaatgaa attaatcgtt gatttgatgt atgaaggcgg tatggaaaat gtacgttact
     5161 caatttcaaa tactgctgaa tttggtgact atgtttcagg accacgtgtt atcacaccag
     5221 atgttaaaga aaatatgaaa gctgtattaa ctgatatcca aaatggtaac ttcagtaatc
     5281 gctttatcga agacaataaa aatggattca aagaatttta taaattacgc gaagaacaac
     5341 atggtcatca aattgaaaaa gttggtcgtg aattacgcga aatgatgcct tttattaaat
     5401 ctaaaagcat tgaaaaataa gatagaccta caatgaggag ttgttaaata tgagtagtca
     5461 tattcaaatt tttgatacga cactaagaga cggtgaacaa acaccaggag tgaattttac
     5521 ttttgatgaa cgcttgcgta ttgcattgca attagaaaaa tggggtgtag atgttattga
     5581 agctggattt cctgcttcaa gtacaggtag ctttaaatct gttcaagcaa ttgcacaaac
     5641 attaacaaca acggctgtat gtggtttagc tagatgtaaa aaatctgaca tcgatgctgt
     5701 atatgaagca acaaaagatg cagcgaagcc ggtcgtgcat gtttttatag caacatcacc
     5761 tattcatctt gaacataaac ttaaaatgtc tcaagaagac gttttagcat ctattaaaga
     5821 acatgtcaca tacgcgaaac aattatttga cgttgttcaa ttttcacctg aagatgcaac
     5881 gcgtactgaa ttaccattct tagtgaaatg tgtacaaact gccgttgacg ctggagctac
     5941 agttattaat attcctgata cagtcggcta cagttaccat gatgaatatg cacatatttt
     6001 caaaacctta acagaatctg taacatcttc aaatgaaatt atttatagtg ctcattgcca
     6061 tgacgattta ggaatggctg tttcaaatag tttagctgca attgaaggcg gtgcgagacg
     6121 aattgaaggc actgtaaatg gtattggtga acgagcaggt aatgcagcac ttgaagaagt
     6181 cgcgcttgca ctatacgttc gaaatgatca ttatggtgct caaactgctc ttaatctcga
     6241 agaaactaaa aaaacatcgg atttaatttc aagatatgca ggtattcgag tgcctagaaa
     6301 taaagcaatt gttggccaaa atgcatttag tcatgaatca ggtattcacc aagatggcgt
     6361 attaaaacat cgtgaaacat atgaaattat gacacctcaa cttgttggtg taagcacgac
     6421 tgaacttcca ttaggaaaat tatctggtaa acacgccttc tcagagaagt taaaagcatt
     6481 aggttatgac attgataaag aagcgcaaat agatttattt aaacaattca aggccattgc
     6541 ggacaaaaag aaatctgttt cagatagaga tattcatgcg attattcaag gttctgagca
     6601 tgagcatcaa gcactttata aattggaaac actgcaacta caatatgtct ctagcggcct
     6661 tcaaagtgct gttgttgttg ttaaagataa agagggtcat atttaccagg attcaagtat
     6721 tggtactggt tcaatcgtag caatttacaa tgcagttgat cgtattttcc agaaagaaac
     6781 agaattaatt gattatcgta ttaattctgt cactgaaggt actgatgccc aagcagaagt
     6841 acatgtaaat ttattgattg aaggtaagac tgtcaatggc tttggtattg atcatgatat
     6901 tttacaagcc tcttgtaaag catacgtaga agcacatgct aaatttgcag ctgaaaatgt
     6961 tgagaaggta ggtaattaat tatgacttat aacattgttg ccctacctgg tgatggaatc
     7021 ggtccagaaa ttttgaacgg atctctatca ttgcttgaaa ttataagtaa taaatataac
     7081 tttaattatc aaatagagca ccacgaattt ggtggtgcct ctattgatac attcggcgag
     7141 cctttaactg agaaaacctt aaatgcgtgt aaaagagcag atgctatttt actgggtgca
     7201 atcggtggac ctaaatggac agatcctaac aatcgaccag aacaaggatt attaaaattg
     7261 cgtaaatcct taaatttatt tgtaaatata cgccccacta ccgttgtcaa aggcgctagt
     7321 tctttatcac ctttaaagga agaacgcgtt gaaggcacag atttagttat agtccgtgaa
     7381 ttgacaagtg gtatttattt tggagaacct agacatttta ataatcacga ggccttagat
     7441 tctcttactt atacaagaga agaaatagaa cgcattgttc acgtagcatt taaattggcc
     7501 gcttcaagac gaggaaaact aacatcagtt gataaagaaa atgtattagc ttctagtaaa
     7561 ttgtggcgca aagtcgtaaa tgaagtaagt caattatatc cagaagtaac agtaaatcac
     7621 ttacttgttg atgcttgtag tatgcattta atcacaaatc caaaacaatt tgacgtcatc
     7681 gtatgtgaaa acttatttgg cgatatttta agtgatgaag cttcagtgat tcctggttca
     7741 cttggtttat caccttctgc tagttttagt aacgatggtc caagattgta tgagcctatt
     7801 catggatcag caccagatat tgcaggtaaa aacgttgcca atccatttgg aatgattcta
     7861 tctttagcga tgtgtttacg tgaaagctta aatcaaccag atgctgcaga tgaattagaa
     7921 caacatattt atagcatgat tgaacatggg caaacgacag cagatttagg cggcaaattg
     7981 aatactactg atattttcga aattctatct caaaaattga atcactaagg gggagatgta
     8041 aatgggtcaa acattatttg acaaggtgtg gaacagacat gtgttatacg ggaaattggg
     8101 cgaaccgcaa ctattataca ttgatttaca ccttatacat gaagttactt ctcctcaagc
     8161 atttgaagga cttaggcttc aaaacagaaa attaagacgc ccagatttaa catttgcaac
     8221 actcgatcac aatgttccta ctattgatat attcaatatt aaagatgaaa ttgcaaacaa
     8281 acaaatcaca acattacaaa aaaacgccat agattttggg gtgcatattt ttgatatggg
     8341 ttctgatgaa caaggtattg ttcacatggt aggacctgag acaggactta cacagcctgg
     8401 caagacaatc gtttgtggtg actctcacac agcaacacat ggagcatttg gtgctattgc
     8461 atttggaatt ggaacaagtg aagttgaaca tgttttcgca actcaaacgc tatggcaaac
     8521 aaaacccaaa aacttaaaaa tcgatattaa tggtacctta ccaacaggcg tctatgctaa
     8581 ggacattatt ctgcatttaa ttaaaacgta tggtgttgac tttggtacag gctatgcttt
     8641 ggaatttact ggcgaaacaa ttaaaaacct ttcaatggat ggtcgaatga ctatttgtaa
     8701 catggctatc gaaggtggtg ccaaatacgg cataatccaa cctgatgata taacatttga
     8761 atatgttaaa gggagaccat ttgccgataa cttcgctaaa tcagttgata agtggcgtga
     8821 gctatattct gatgacgacg cgatatttga tcgtgtaatt gaacttgatg tttcaacatt
     8881 agaaccacaa gtgacatggg gaactaatcc tgaaatgggt gttaatttca gtgaaccatt
     8941 ccctgaaatc aatgatatca acgatcaacg tgcgtatgat tatatggggt tagaaccagg
     9001 tcaaaaagct gaagacatcg acttagggta tgtttttctc ggttcatgta caaatgctag
     9061 actatcagat ttgattgaag ctagtcatat tgttaaagga aataaagttc atccaaatat
     9121 tacagctatt gtcgtaccag gttctcgtac agtaaaaaaa gaagcagaaa aattaggtct
     9181 agatactatc tttaaaaatg caggatttga atggcgtgaa ccaggatgtt caatgtgttt
     9241 aggcatgaat cctgaccaag tacctgaggg cgtacattgt gcatctacaa gtaatcgaaa
     9301 ctttgaagga cgacaaggca aaggtgcaag aacacattta gtatcccctg ctatggcagc
     9361 agcagctatt catggtaaat ttgtggacgt aagaaaggtg gttgtttaaa tggcagcaat
     9421 caaacctatt acaacatata aaggtaaaat agtccctctc ttcaacgaca atatcgatac
     9481 agaccaaatc attcctaagg tacacttaaa gcgtatttca aaaagtggct ttggtccatt
     9541 tgcttttgat gaatggcggt acttacctga tggttcagat aatcctgatt tcaatcctaa
     9601 caaaccacaa tataaagggg cttctatttt aattactgga gataattttg gatgtggttc
     9661 aagtcgtgaa catgctgctt gggctcttaa ggactatggt tttcatatta ttattgcagg
     9721 aagtttcagt gacatatttt atatgaattg cactaaaaat gcgatgttgc ctatcgtttt
     9781 agaaaaaagt gcccgtgaac atcttgcaca atatgttgaa attgaggtcg atttaccaaa
     9841 tcaaactgtg tcatcaccag acaagcgttt ccattttgaa attgatgaaa cttggaagaa
     9901 taaacttgta aatggcttag atgacattgc aatcacccta caatatgaat cattaataga
     9961 aaaatatgaa aaatcacttt aagggagttg aatattatga cagtcaaaac aacagtttct
    10021 acgaaagata tcgatgaggc atttttaaga cttaaagata ttgtcaaaga aacaccttta
    10081 caattagacc attacttatc tcaaaagtat gattgtaaag tctatttaaa acgagaagat
    10141 ttacaatggg tacgttcttt taaattaaga ggtgcttaca acgctatttc tgttttatca
    10201 gatgaagcta aaagtaaagg tattacatgt gcaagtgcag gtaatcatgc tcaaggtgtt
    10261 gcctatacag ctaaaaaact taatttaaac gctgttatct ttatgccagt cactacacct
    10321 ttacaaaagg taaatcaagt aaagttcttt ggaaatagta acgttgaagt tgtactcact
    10381 ggtgatacat ttgatcactg tttagctgaa gctttaactt atacaagtga acatcaaatg
    10441 aactttatag atccattcaa taatgttcat acaatttctg gacaaggtac gcttgctaaa
    10501 gaaatgctag aacaagcaaa gtctgacaat gttaactttg attatctatt tgccgcaatt
    10561 ggtggtggcg gtttaatttc aggtattagt acttacttta aaacctattc acctaccacg
    10621 aaaattatag gtgttgaacc ttcaggtgca agtagtatgt atgaatctgt tgtggtaaat
    10681 aatcaggtag tcacattgcc taatatcgat aaatttgtgg acggtgcatc tgtagctaga
    10741 gttggcgata ttacatttga aattgcaaaa gaaaatgtag atgattacgt tcaagtagat
    10801 gaaggtgcag tttgttctac gattttagat atgtattcaa aacaagcaat tgtagcagaa
    10861 cctgctggcg cattaagtgt aagtgcgctt gaaaactata aagatcatat taaaggtaaa
    10921 acagtggttt gtgtcattag tggtggtaat aatgatatta atcgaatgaa agaaattgaa
    10981 gaacgttcat tactatacga agaaatgaag cattacttta tcttaaattt ccctcaacgt
    11041 ccaggtgcat tgagagaatt tgtaaatgac gtattaggac ctcaagacga tattactaaa
    11101 tttgaatact taaaaaaatc ttctcaaaat acaggtactg tcattattgg tattcaactt
    11161 aaagatcatg atgatttaat acaactcaaa caacgtgtaa atcatttcga tccttccaat
    11221 atttatatta atgaaaataa gatgttatat tcattgttaa tttaacacat agtaagaaaa
    11281 acagtcataa attgatttct aattgaaatc atcttatgac tgctttttat tatactttac
    11341 atttctcgtt tcgtcagatt caaacgtttt cacttcgcca agccatcttt ctttgtgttt
    11401 gcttttattt tgacgtttta gacataaaaa aagagacctt gcggtctcaa tgcggctcat
    11461 cgcatccact ttttgcctgg caacgttcta ctctagcgga acgtaagttc gactaccatc
    11521 gacgctaagg agcttaactt ctgtgttcgg catgggaaca ggtgtgacct ccttgctata
    11581 gtcaccagac atatgaatgt aa
//
LOCUS       DALPQQ010000081        11538 bp    DNA     linear   BCT 22-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus strain K18-6-464
            SAMD00233528-rid16434743.denovo.081, whole genome shotgun sequence.
ACCESSION   DALPQQ010000081 DALPQQ010000000
VERSION     DALPQQ010000081.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMD00233528
            Sequence Read Archive: DRR236061
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 11538)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11538)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001543423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001543423.1
            Genome Coverage       :: 77x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/22/2022 17:09:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,811
            CDSs (total)                      :: 2,743
            Genes (coding)                    :: 2,689
            CDSs (with protein)               :: 2,689
            Genes (RNA)                       :: 68
            rRNAs                             :: 2, 4, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 4, 2 (16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 54
            CDSs (without protein)            :: 54
            Pseudo Genes (ambiguous residues) :: 0 of 54
            Pseudo Genes (frameshifted)       :: 27 of 54
            Pseudo Genes (incomplete)         :: 27 of 54
            Pseudo Genes (internal stop)      :: 10 of 54
            Pseudo Genes (multiple problems)  :: 10 of 54
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11538
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMD00233528-rid16434743.denovo.081"
                     /strain="K18-6-464"
                     /db_xref="taxon:1280"
                     /geo_loc_name="Japan: Niigata"
     gene            complement(260..1801)
                     /gene="guaA"
                     /locus_tag="O7798_001792"
     CDS             complement(260..1801)
                     /gene="guaA"
                     /locus_tag="O7798_001792"
                     /EC_number="6.3.5.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019166941.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamine-hydrolyzing GMP synthase"
                     /protein_id="HDC2864050.1"
                     /translation="MEMAKEQELILVLDFGSQYNQLITRRIREMGVYSELHDHEISIE
                     EIKKMNPKGIILSGGPNSVYEEGSFTIDPEIYNLGIPVLGICYGMQLTTKLLGGKVER
                     ANEREYGKAIINAKSDELFAGLPAEQTVWMSHSDKVIEIPEGFEVIADSPSTDYAAIE
                     DKKRRIYGVQFHPEVRHTEYGNDLLNNFVRRVCDCRGQWTMENFIEIEIEKIRQRVGD
                     RRVLCAMSGGVDSSVVAVLLHKAIGDQLTCIFVDHGLLRKGEGDMVMEQFGEGFNMNI
                     IRVNAKDRFMNKLKGVSDPEQKRKIIGNEFVYVFDDEASKLKGVDFLAQGTLYTDVIE
                     SGTKTAQTIKSHHNVGGLPEDMEFELIEPINTLFKDEVRKLGIELGIPEHLVWRQPFP
                     GPGLGIRVLGEITEDKLEIVRESDAILRQVIREEGLEREIWQYFTVLPNIQSVGVMGD
                     YRTYDHTVGIRAVTSIDGMTSDFARIDWEVLQKISSRIVNEVDHVNRVVYDITSKPPS
                     TIEWE"
     gene            complement(1826..3292)
                     /gene="guaB"
                     /locus_tag="O7798_001793"
     CDS             complement(1826..3292)
                     /gene="guaB"
                     /locus_tag="O7798_001793"
                     /EC_number="1.1.1.205"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002955225.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IMP dehydrogenase"
                     /protein_id="HDC2864051.1"
                     /translation="MWESKFAKESLTFDDVLLIPAQSDILPKDVDLSVQLSDKVKLNI
                     PVISAGMDTVTESKMAIAMARQGGLGVIHKNMGVEEQADEVQKVKRSENGVISNPFFL
                     TPEESVYEAEALMGKYRISGVPIVDNKEDRNLVGILTNRDLRFIEDFSIKIVDVMTQE
                     NLITAPVNTTLEEAEKILQKHKIEKLPLVKDGRLEGLITIKDIEKVIEFPNAAKDEHG
                     RLLVAAAIGISKDTDIRAQKLVEAGVDVLVIDTAHGHSKGVIDQVKHIKKTYPEITLV
                     AGNVATAEATKDLFEAGADIVKVGIGPGSICTTRVVAGVGVPQITAIYDCATEARKHG
                     KAIIADGGIKFSGDIIKALAAGGHAVMLGSLLAGTEESPGATEIFQGRQYKVYRGMGS
                     LGAMEKGSNDRYFQEDKAPKKFVPEGIEGRTAYKGALQDTIYQLMGGVRAGMGYTGSH
                     DLRELREEAQFTRMGPAGLAESHPHNIQITKESPNYSF"
     gene            complement(3330..4598)
                     /locus_tag="O7798_001794"
     CDS             complement(3330..4598)
                     /locus_tag="O7798_001794"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000793018.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="purine permease"
                     /protein_id="HDC2864052.1"
                     /translation="MKNLILSVQHLLAMYAGAILVPIIVGTSLKFTPEQIAYLVTVDI
                     FMCGVATFLQANKVTGTGLPIVLGCTFTAVAPMILIGQTKGIDVLYGSLFLSGILVII
                     IAPFFSHLVKFFPPVVTGSVVTIIGINLMPVAMNYLAGGQGAKDYGDVKNILLGLMTL
                     IIILLLQRFTTGFIKSIAILIGLVLGTIGAGLLGMVDINQVNHAGWLGIPVPFRFSGF
                     SFDVTSTLVFFIVAIVSLIESTGVYHALSEITGKKLERKDFRKGYTAEGLAIVLGSIF
                     NSFPYTAYSQNVGLVSLSGAKKNNVIYGMVVLLLICGCIPKLGALANIMPLPVLGGAM
                     IAMFGMVMAYGVSILGHIDFKNQNNLLIIAVSVGLGTGISAVPQAFKGLGEQFAWLTQ
                     NGIVLGAISAIILNFFFNGIKYKQTEENVK"
     gene            complement(4598..5176)
                     /gene="xpt"
                     /locus_tag="O7798_001795"
     CDS             complement(4598..5176)
                     /gene="xpt"
                     /locus_tag="O7798_001795"
                     /EC_number="2.4.2.22"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498961.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="xanthine phosphoribosyltransferase"
                     /protein_id="HDC2864053.1"
                     /translation="MELLGQKVKEDGVVIDEKILKVDGFLNHQIDAKLMNEVGRTFYE
                     QFKDKGITKILTIEASGIAPAIMAALHFDVPCLFAKKAKPSTLTDGYYETSIHSFTKN
                     KTSTVIVSKEFLSEEDTVLIIDDFLANGDASLGLYDIAQQANAKTAGIGIVVEKSFQN
                     GHQRLEEAGLTVSSLCKVASLEGNKVTLVGEE"
     regulatory      complement(5407..5509)
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00167"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="purine riboswitch; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /bound_moiety="guanine and/or adenine"
                     /db_xref="RFAM:RF00167"
     gene            5689..6096
                     /locus_tag="O7798_001796"
     CDS             5689..6096
                     /locus_tag="O7798_001796"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498960.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="general stress protein"
                     /protein_id="HDC2864054.1"
                     /translation="MADITVVNDTGELYNVINQKKSEGYLESELTIISKSKLHLNDLH
                     DSEISLISTSGTFSDRMTKLLTGEDGEHAVLSRYNLAPDELEKYKQLILDDKMLVVAV
                     RDKSSHQEVHENNSAYEEIDITHFAEASKGPKA"
     gene            6239..6901
                     /locus_tag="O7798_001797"
     CDS             6239..6901
                     /locus_tag="O7798_001797"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498959.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDC2864055.1"
                     /translation="MEFKTIQSVKDPHYNEALKLYDTKLNLSLTEDKRIIKRSLENNK
                     TENDYVFIVGLENDVVVSLATAHYEATTNSAFLIYLFAKDLPNHDELMTQTLHQIEHE
                     LNLLSNLVHSRSINFLMMEVPKEPADLTQDNGLIIEHRRQFLYEHQFERQTEIDYIHP
                     TNDGHTKKVDLFLKKNIKLTKDIYGTSVKSNYILKYVFANGIAREIIYALLEEMDLRK
                     PF"
     gene            7019..7975
                     /locus_tag="O7798_001798"
     CDS             7019..7975
                     /locus_tag="O7798_001798"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498958.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDC2864056.1"
                     /translation="MLTKEFAQRVELSEKQVRKIVQHLEERGYQLSKTEYRGREATDF
                     KEEDIELFKDIADKVKQTNSYDLAFDELEKEKDFLQVIVKNDDKNLPTNQNVAQLVED
                     LRLEIQKMREERHLLGQMMNQVHQQQQELKELQNQLTSKIDSNSESLKAIQTSQEAIQ
                     EAQASQAKALAESTNKVEKNAVTEDKADSKDSKVAGVNTSTDAKTDTKAENAGDGTAT
                     KVDKEDQISATEAIEKASVEQSKNDNAAETSNKEATVDAEAQHDAEQQVAEAHAEASK
                     QATSNDSLEAKAENDSTASQSEMSEPKPQEEKKGFFARLFNL"
     gene            complement(8766..8867)
                     /locus_tag="O7798_001799"
     CDS             complement(8766..8867)
                     /locus_tag="O7798_001799"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498957.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDC2864057.1"
                     /translation="MQLNVNMMKFDRWHKGICKQIVLNSVVIGGKGK"
     gene            8952..10340
                     /locus_tag="O7798_001800"
     CDS             8952..10340
                     /locus_tag="O7798_001800"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498956.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-cystine transporter"
                     /protein_id="HDC2864058.1"
                     /translation="MNAFLTLINIIVLVIFIVILHMMARKHISFAKRVFTALGIGIVF
                     GVLLHLIYGTHSNVITSTSDWFNIVGQGYVALLQMIVMPLIFISIVAAFTKIQIGEKF
                     AKIGSLIFIFLIGTVTIAAIVGVVYALVFGLDASTINLGNAEQARGSEIAKQAKDLTA
                     HTLPQQILELLPKNPFLDFTGQRATSTIAVVIFASFIGFAYLRVARKQPDHGELLKRA
                     IDAIYSLVMAIVTFVLRLTPYGVLAIMANTLSTSDFGAIWTLGKFLIASYAALITMYI
                     IHLIILSLLGISPIRYVKKTLEVLIFAFTSRSSAGALPLNVQTQTRRLGVPEGIANFA
                     ATFGLSIGQNGCAGIYPAMLAIMVAPVANVEIDLQFIVTLIAVVIISSFGVAGVGGGA
                     TFASILVLSTLNLPVALAGVLISVEPLIDMGRTALNVNDSMLAGTGTAKLTKHWDKDT
                     FDSNDNAALTSH"
     gene            complement(10421..11176)
                     /locus_tag="O7798_001801"
     CDS             complement(10421..11176)
                     /locus_tag="O7798_001801"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498955.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADPH-dependent oxidoreductase"
                     /protein_id="HDC2864059.1"
                     /translation="MSEHVYNLVKKHHSVRKFKNKPLSEDVVKKLVEAGQSASTSSFL
                     QAYSIIGIDDEKIKENLREVSGQPYVVENGYLFVFVIDYYRHHLVDQHAETDMENAYG
                     STEGLLVGAIDAALVAENIAVTAEDMGYGIVFLGSLRNDVERVREILDLPDYVFPVFG
                     MAVGEPADDENGAAKPRLPFDHVFHHNKYHADKETQYAQMADYDQTISEYYDQRTNGN
                     RKETWSQQIEMFLGNKARLDMLEQLQKSGLIQR"
BASE COUNT         3743 a         2237 c         1800 g         3758 t
ORIGIN      
        1 tttataataa caacaaatga ctggagcttt aatacacttg aattagaaaa aatagtagac
       61 gaaactataa tttatgattt aaaacaagaa gatcctaaac aatatgaaat tttatataaa
      121 aataaacacg gaaaattgcc ttattgatga attaaaacgc aaacttagaa caccttaccc
      181 cttttccgtc cttattgtaa ttttccaact actcaaatta aaaaccaccc gtgcaaacag
      241 gtggttttat tatatataat tattcccact caattgtgct tggtggtttt gatgtaatgt
      301 catagactac gcggttgacg tgatctactt cgtttacgat acgactagaa atcttttgta
      361 agacttccca atcgatgcgt gcgaagtcac ttgtcatacc gtcgatagat gttactgcac
      421 gaatacctac tgtgtgatca tacgtacggt agtctcccat aacacctact gattgaatgt
      481 ttggtaacac tgtgaagtat tgccaaattt ctctttcaag accttcttct ctaatcactt
      541 ggcgtaaaat cgcgtctgat tctctaacga tttctagttt atcttcagta atttctccaa
      601 gtacacgaat accaagacca ggtcctggga atggttgtct ccatactaaa tgttctggaa
      661 tacctaactc aatacctaat ttacgtactt catctttaaa caatgtattg attggttcga
      721 ttaattcgaa ttccatgtct tctggtaatc caccaacatt gtggtgtgat ttgattgttt
      781 gtgctgtttt agtacctgat tcgatgacgt ctgtatatag tgttccttgc gcaaggaagt
      841 ctacaccttt cagttttgat gcttcatcat caaatacgta tacaaattca ttaccaatga
      901 ttttacgttt ttgttcagga tctgaaacac cttttaattt attcataaag cgatctttcg
      961 cattaacacg aataatattc atgttgaaac cttcaccgaa ttgctccata accatgtcgc
     1021 cttcaccttt acgaagtaag ccatggtcta caaagataca tgttagttga tcacctattg
     1081 ctttatgcaa tagtacagct acaacagatg aatctacgcc gccactcatc gcacataata
     1141 cacgacggtc tcctacgcgt tgacgaatct tttcaatttc gatttcgata aagttttcca
     1201 ttgtccattg acctctacaa tcacaaacac gacggacaaa attatttaat aaatcattac
     1261 catattctgt atgacgtact tctggatgga attgaacacc ataaatgcga cgtttcttat
     1321 cttcgattgc tgcatagtct gtgcttgggc tatcagcgat aacttcaaag ccttctggaa
     1381 tttcaataac tttatcagaa tgactcatcc aaacagtttg ttctgctggt aagccagcga
     1441 ataactcatc tgacttcgca ttaatgattg ctttaccgta ttcacgttca ttggcacgtt
     1501 caactttacc acctaataat ttagtagtta attgcatgcc gtaacaaata ccaagtactg
     1561 gaattcctaa attatatatt tccggatcaa ttgtaaatga accttcttca taaactgaat
     1621 ttggaccacc tgataagata ataccttttg gattcatttt cttaatttct tcaattgaaa
     1681 tttcatgatc gtgtaattca ctataaacgc ccatttcacg aattcggcgt gtaattaatt
     1741 ggttgtattg gctaccaaag tctaagacaa ggattaactc ttgttctttt gccatttcca
     1801 tatttgtcgt tctcctttat cttaattaga atgagtagtt cggtgattct ttcgtaattt
     1861 gaatattatg tggatggctt tctgctaaac cagcaggacc catacgtgta aattgtgctt
     1921 cttcgcgtaa ttctcttaaa tcgtgtgaac cagtataacc cataccagca cgcacaccgc
     1981 ccattaattg gtaaattgta tcttgtaacg cacctttata agccgtacgt ccttcgatac
     2041 cttcaggaac aaatttctta ggcgctttat cctcttggaa gtaacggtcg tttgaacctt
     2101 tttccatcgc acctaaagag cccataccac ggtatacttt atattgtcta ccttggaaaa
     2161 tttctgttgc gcctgggctt tcttcagtac ctgctaataa gctacctaac ataaccgcat
     2221 gtccaccagc agctaatgct ttaatgatat ctcctgagaa tttaatacca ccatcagcaa
     2281 tgatagcttt accatgtttg cgtgcttcag ttgcacaatc ataaattgct gtaatttgtg
     2341 gtacaccaac acctgctaca acacgcgtcg tacaaattga acctgggcca ataccaactt
     2401 taacaatatc tgcacccgct tcaaataaat cttttgttgc ttctgcagtt gctacgttac
     2461 ctgctactaa tgtgatttct gggtaagtct tcttaatatg tttcacttga tcgataacac
     2521 ctttagagtg accatgtgct gtatcgataa ctaagacatc cacacctgct tcgactaatt
     2581 tttgagcacg aatatcagta tcttttgaaa taccaattgc tgcggctaca agtagacgac
     2641 catgttcatc ttttgctgca ttagggaatt cgataacttt ttcaatatct ttaatagtaa
     2701 taagaccttc tagacgtccg tctttaacta atggtaactt ttcaatctta tgtttttgga
     2761 gaattttttc tgcttcttca agtgttgtat tcactggagc tgtaattaaa ttttcttgcg
     2821 tcattacatc tacaatttta atcgagaagt cttcaataaa acgtaagtca cggtttgtta
     2881 aaatacctac taagttgcga tcttctttat tatcaacaat tggtacacct gaaatacggt
     2941 atttacccat taatgcttct gcttcataaa cgctttcttc tggcgttaag aaaaatgggt
     3001 ttgaaatgac accattttct gagcgtttta ctttttgaac ttcgtccgct tgttcttcaa
     3061 cgcccatatt tttatgaata acacctaaac caccttgacg agccatagca atcgccattt
     3121 tagattcagt tacagtatcc ataccagcag aaataactgg aatatttaat ttaactttgt
     3181 ctgataattg tacgcttaaa tcaacgtctt tcggtaaaat atcagattgt gctggaatta
     3241 ataacacatc atcaaacgtt aatgattctt ttgcaaattt actttcccac attaaaaaca
     3301 gcctccattt ttcaaattaa ttagttatat tatttcacat tttcttccgt ttgtttatac
     3361 tttattccat taaaaaagaa attaagaata attgcagaga ttgcgcctaa aacaattccg
     3421 ttttgagtca accatgcaaa ttgttcacct aaacctttaa atgcttgtgg tacagcgctt
     3481 ataccagtac ctaatcctac tgatacagcg ataattaata aattgttttg atttttaaaa
     3541 tcgatatgtc ctaatatact aacaccatat gccattacca tgccaaacat agctatcatc
     3601 gcaccgccta acacaggtag cggcatgata tttgctaatg cgccaagctt aggtatacaa
     3661 ccacatataa gtaataacac gaccatgccg tatataacat tgtttttctt agcgccggat
     3721 aaagaaacaa gtcctacatt ttgcgaatag gctgtatacg gaaatgaatt gaatatagaa
     3781 cctaacacta tcgctagacc ttccgcagta taacctttac gaaaatcttt tctttctaac
     3841 ttcttaccgg taatttcact taacgcatga tagacacctg tcgactcaat taaactaacg
     3901 atagctacaa taaagaacac taacgtcgat gtcacatcaa agctaaatcc agagaatcta
     3961 aacggcactg ggatgcctaa ccaaccggca tgattgactt gattaatatc gaccatccca
     4021 agtaagccag cacctatcgt tcctaaaacg agtccaatta atatggcaat actcttaata
     4081 aatccagttg tgaatctttg taaaagaaga ataatgatta atgtcattaa acctaacaaa
     4141 atgttcttaa catctccata gtcctttgca ccttgacctc cagctaagta attcattgct
     4201 actggcatta aattgatacc aatgatagta acaacactac ccgttactac tggtgggaag
     4261 aattttacaa gatgtgaaaa gaaaggcgcg atgataataa ctaatatccc tgataaaaat
     4321 agcgaaccat aaagtacatc tattcctttc gtttgaccaa ttaaaatcat gggcgcaaca
     4381 gccgtgaatg tacatccaag aacgattggt aatcctgttc ctgttacttt attggcttgt
     4441 aaaaatgtgg caaccccaca cataaatata tctactgtaa ctaagtaagc gatttgttca
     4501 ggtgtaaact tcaaacttgt accaacaatg attggaacta agatagcacc tgcgtacata
     4561 gctaaaagat gttgaacact taggattaaa tttttcatta ttcttctccc accaatgtca
     4621 ctttgtttcc ttctagtgaa gcaaccttgc agagagaaga aactgttaaa cctgcttctt
     4681 ctaaacgttg atgcccattt tggaaactct tttcaacaac aataccaata ccagctgtct
     4741 tagcattcgc ttgctgtgcg atatcgtata atcctaatga agcatcacca tttgctaaaa
     4801 agtcatcgat gataagtaca gtatcttctt ctgataaaaa ctcttttgaa acaatgaccg
     4861 tacttgtttt atttttagta aatgaatgaa tagatgtttc ataataacca tccgtcaaag
     4921 tgctaggttt tgcttttttc gcaaataaac atggcacatc aaaatgcagt gcagccatga
     4981 ttgcaggtgc gataccggaa gcttcaatgg ttaagatttt agtaatccct ttatctttaa
     5041 attgctcgta aaaagtgcga ccaacttcat tcattaactt tgcatcaatt tgatgattta
     5101 aaaatccatc gacttttaaa atcttctcat caatgacaac gccgtcttcc tttacttttt
     5161 gtcctagtaa ctccactctt aaaacctcct cagatttgtg tgaaacattt tgctcttaaa
     5221 ttggtgctag atacaaaaaa atccccaaac taaataatag tttcagggtt tatgagtgaa
     5281 cgaacatgca taacgaattt gtcatgcaat caatgtaaaa gaagtttcat caaataaact
     5341 gtgaccatca tataaaatga tataaatcac ccaccatggt tacaatttaa tggctgaagc
     5401 tactcctagt attgtgttgt tactcatagt catgtcgttc aaggcaacat ggtagaaact
     5461 tctaaagcca tattctttag attatatgag tttatgtaaa ttatttaacg ataatagcaa
     5521 attttcggca ttttttcaat aactgcttag gtaatctttt aatagtttta taaatgtaca
     5581 gagacgttta atgcgaatga agacttataa cttaataatg taagggtttt actttataat
     5641 aagaagggta aaagattaaa taaacaaatt tttaaagggg cgacaactat ggcagatatt
     5701 actgtagtaa atgacactgg cgaattatac aacgtaatca atcaaaagaa atctgaaggt
     5761 tatttagaat cagagctaac aattattagt aaaagtaaat tacacctaaa tgacttacac
     5821 gactctgaaa tctcccttat ctcaacaagt ggaacattta gtgatagaat gactaaactg
     5881 ttaacaggag aagatggtga acatgcagtt ttatcacgct acaacttagc gcctgatgaa
     5941 ttagaaaaat ataaacaact tattttagac gataaaatgt tagttgtagc ggttcgtgac
     6001 aaatcatcac atcaagaagt gcatgaaaat aattcagctt atgaagagat tgatattaca
     6061 cattttgctg aagcatctaa aggtcccaaa gcttagttat cacactgaat tcaaaatgag
     6121 attactgtac tgtctaattt aagatagtac agttttttat accatttaaa agtttatgaa
     6181 cagtctttta cagcaggcga ttatgctata atattattta aattggggag gtgttcttat
     6241 ggaatttaaa accattcaat ctgtcaaaga tccacattac aacgaagcac ttaaacttta
     6301 cgatactaag ttaaatttat ctttaactga agataaacgt atcatcaaac gctcattaga
     6361 aaacaacaaa accgaaaacg attatgtctt tatcgtaggc ttagaaaacg atgttgttgt
     6421 cagtctagca actgcacatt atgaagccac aaccaattca gcatttttaa tttatttatt
     6481 cgcaaaagac ctacccaacc atgatgagtt aatgacgcaa acattacatc aaattgaaca
     6541 tgaactaaac ttattatcaa accttgttca ttctagaagt attaactttt taatgatgga
     6601 agtccctaaa gaacctgcag atttaacaca agataacggc ctcattattg aacaccgtag
     6661 acagttttta tacgaacatc aatttgaaag acaaactgaa attgattaca ttcatccaac
     6721 taatgatggt cacactaaaa aagtggactt atttttaaag aaaaatatta aactgacaaa
     6781 ggatatctac ggtacaagtg ttaaatcaaa ttatattttg aagtatgtat ttgccaatgg
     6841 tatcgcacgt gaaattattt atgctttatt agaagaaatg gatttacgta aaccatttta
     6901 aacaaacttg aaatcactaa caataacgtt taaactatgt atgaagcaag actgacgttt
     6961 cactgcccgt agacaaacgt cagtatacat aaagtatatg cagaaaggac tttaaagtat
     7021 gttaactaaa gaatttgcac aacgcgtaga actaagtgag aagcaagtac gtaaaattgt
     7081 tcaacattta gaagaacgtg gttaccaact aagcaagact gaatatcgtg gtcgtgaagc
     7141 aactgatttc aaagaagaag atatcgagct tttcaaagac attgccgaca aagtaaaaca
     7201 aacaaatagt tatgatctag cgtttgatga attagaaaaa gaaaaagact tcctgcaagt
     7261 cattgtcaaa aacgatgaca aaaacttacc tactaatcaa aatgtcgctc aactagtaga
     7321 agatttacgc ctagaaatcc agaaaatgcg cgaagaacgt cacctacttg gtcaaatgat
     7381 gaatcaagta catcagcaac aacaagaatt aaaagaactt caaaatcaac ttacatctaa
     7441 aatcgattca aatagcgaat ccttaaaagc catccaaaca tcacaagagg ctatccaaga
     7501 agcgcaagcc tctcaagcaa aagcattagc tgaatcaaca aataaagttg aaaagaatgc
     7561 tgttactgaa gataaagctg acagtaaaga ttcgaaggtt gctggagtga atacatcaac
     7621 agacgctaag acggatacta aagcagaaaa tgcaggcgat ggcactgcta ctaaagtaga
     7681 taaagaggat caaatttctg caactgaagc aattgaaaaa gccagcgttg agcagtctaa
     7741 aaatgacaat gcagctgaga cttcaaataa agaagctaca gtagatgcag aagcgcaaca
     7801 tgatgctgaa caacaagtag cagaagccca tgcagaagct tctaaacaag ctacttcgaa
     7861 cgattcattg gaagcgaaag cagaaaatga cagcacagct tcacagtcag aaatgtcaga
     7921 accaaaacct caagaagaga aaaaaggttt cttcgcacgt ttattcaacc tgtaaacttg
     7981 tgatttgaac acaaatttaa tactcaattc atatatagct ttgatttaaa aactgatttt
     8041 tataaaccta tagaactgta atttactttc aaatttaata ctcaattcat aaaacctgaa
     8101 acaagctgat atactccatt caatatctac tttgaagaga gcatatcaaa ctaatttgtt
     8161 tcaggttttt taattattca ttatgattaa tattgaattt tgaataaatt tttatagtat
     8221 gttactttta aatgggatgg cttctgtgta cttctaaata gattcatctt aataagtcca
     8281 ttcaatttaa atgtttggct gtgttagtaa ctgacgaatc gcacaagtgc acactcatat
     8341 tcacatttac tacaaacgcc tttttgctca aacaaaaata tttgtttacg gtagcttttg
     8401 aactaccacc tgcacacacg aacactcaaa agatgctaat tttgattcga cagaattttt
     8461 tacaacgtgt ttgttcgaaa cgtcttttca aggttgatca tttattatct tttcattcaa
     8521 taaatatgag gttagcaatt tttatcaaac cgccatagcc acatctcgat tcaaggataa
     8581 atttgttttc tcatatctta tctctcatga cagtgcacga tatatatctt ttccaaatat
     8641 tcatcacttt tttcctgtta aaatcatttc tattattaat gctttaatga caacttattt
     8701 aatttattgc atttaatgcc ctgcttcatt ttcaaatatt aactttaatc gactagctca
     8761 tcacactatt taccctttcc acctatcact actgaattca aaacgatttg tttacaaatc
     8821 cccttatgcc aacggtcgaa tttcatcatg tttacattta attgcaaatg ccctcttgaa
     8881 atattttaaa attaatatta ttcttagcat actagtcgga attatattca aaaatttgag
     8941 gagtgacgtt catgaatgct tttcttacac tgattaatat tattgtattg gtgattttca
     9001 tcgtaatatt gcacatgatg gctcgcaaac atatatcttt tgcgaaacgt gtgtttacag
     9061 ctttagggat tggtatagta ttcggtgtgt tattgcatct tatttatggc acacattcga
     9121 atgttattac atcaacaagt gactggttca acattgtcgg acaaggttac gttgcattgt
     9181 tgcaaatgat tgttatgcct ttaattttca tttctattgt agctgcattc actaaaattc
     9241 aaatcggaga aaagtttgct aaaattggta gtctcatttt tatcttttta attggcactg
     9301 tcaccattgc tgcgattgtt ggtgttgtgt atgccttggt gtttggttta gatgcatcaa
     9361 caattaacct tggtaacgct gaacaagcac gtggaagcga aattgctaaa caagcgaaag
     9421 atttaacagc acatacgtta ccacaacaaa ttttggaatt attgcctaaa aatccattct
     9481 tagatttcac tggacaacgt gcaacttcca cgattgctgt cgtgatattt gcttcgttta
     9541 taggatttgc ttatttacgc gtagcacgca aacaacctga tcatggtgaa ttgcttaagc
     9601 gtgcgattga cgctatctat tcactagtaa tggcgattgt gacgttcgtc ttacgtttaa
     9661 cgccatacgg tgtattagca attatggcca acacattatc gacaagtgac tttggcgcca
     9721 tttggacttt aggaaaattc ttaatcgcat cgtacgctgc attaattacg atgtatatca
     9781 ttcacttaat tattttaagc ctgttaggta ttagcccaat tcgctatgtt aaaaagactt
     9841 tggaagtatt aatctttgca ttcacatcac gctcaagcgc gggtgcctta ccattgaatg
     9901 tacaaacaca aacaagacgt ctaggcgtgc cagaaggtat tgccaatttc gctgcgacat
     9961 ttggattgtc gattggacaa aatggttgtg caggcattta ccctgccatg cttgcaatta
    10021 tggtcgcacc cgtcgctaat gtagaaattg atttacaatt tattgtaacg ttaatcgctg
    10081 tcgtgattat tagttcattc ggcgttgctg gcgtcggtgg cggggctaca tttgcatcca
    10141 tattggtgtt gtcaacgtta aacttgccag tcgctttagc cggcgtgctc atctccgttg
    10201 aaccattgat tgacatgggt agaacagcat taaacgtgaa cgattcaatg ctagctggta
    10261 caggtaccgc caagttaact aaacattggg ataaagatac tttcgattca aatgataatg
    10321 ctgcattaac ttcacactaa ttcattgcaa gaaatacccg ccccctctag ctatacttat
    10381 cattttaagc tagagggggg cgggttattt tggtatcttg ctatcgctgt attaagcctg
    10441 atttttgcaa ttgttctaac atatctaatc ttgctttgtt tcctaggaac atctcaattt
    10501 gctgcgacca tgtttctttg cgattcccgt ttgtacgttg atcatagtac tcgctgattg
    10561 tctggtcgta atctgccatt tgtgcatact gtgtttcctt atcagcatga tacttattat
    10621 gatggaagac atggtcaaat ggtaagcgtg gcttggctgc accattttcg tcatctgcgg
    10681 gttcccctac tgccatacca aataccggga agacatagtc aggtaagtct aaaatttctc
    10741 gaacgcgttc aacatcattt cttaatgatc ctaaaaagac aatgccatac cccatatctt
    10801 cagcagttac cgcaatattt tcggcaacta atgctgcatc gattgcacct actagcaaac
    10861 cttccgttga accatatgca ttttccatat cagtttcagc atgttgatca actaaatgat
    10921 gacgataata atcaataaca aagacgaata aatagccatt ttctacaaca taaggttgtc
    10981 cagaaacttc tcgtaaattt tctttaatct tctcatcgtc gataccaata attgagtatg
    11041 cttgcaggaa acttgacgtc gaagcgcttt gtccagcttc taccaatttc ttaacaacgt
    11101 cttcacttaa aggtttattc ttaaattttc taacagaatg atgctttttc acaagattat
    11161 atacatgttc tgacacgtta cccactcctc gatactttac aattaattta aaatcttcat
    11221 attgcaattg tacacgtcca aactttttta tagcaattat ttgcttataa gttaataatt
    11281 gaacttttta aaatattgtc tcatacttta aaaatccagt ttctcactca ttaccttcat
    11341 ccatctcgaa caaatattct cacaccatta tcaataaggt tgacttagtt gagaatacaa
    11401 atcttctttt tttacatttt ttacattaaa atcaagatat taaatataga cacaaccttt
    11461 taaatcatca actacaaaat ccattatcaa agcactttat attatctttc tttattttaa
    11521 aagtaatcat tcacttta
//
LOCUS       DALPQQ010000082        11521 bp    DNA     linear   BCT 22-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus strain K18-6-464
            SAMD00233528-rid16434743.denovo.082, whole genome shotgun sequence.
ACCESSION   DALPQQ010000082 DALPQQ010000000
VERSION     DALPQQ010000082.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMD00233528
            Sequence Read Archive: DRR236061
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 11521)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11521)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001543423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001543423.1
            Genome Coverage       :: 77x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/22/2022 17:09:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,811
            CDSs (total)                      :: 2,743
            Genes (coding)                    :: 2,689
            CDSs (with protein)               :: 2,689
            Genes (RNA)                       :: 68
            rRNAs                             :: 2, 4, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 4, 2 (16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 54
            CDSs (without protein)            :: 54
            Pseudo Genes (ambiguous residues) :: 0 of 54
            Pseudo Genes (frameshifted)       :: 27 of 54
            Pseudo Genes (incomplete)         :: 27 of 54
            Pseudo Genes (internal stop)      :: 10 of 54
            Pseudo Genes (multiple problems)  :: 10 of 54
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11521
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMD00233528-rid16434743.denovo.082"
                     /strain="K18-6-464"
                     /db_xref="taxon:1280"
                     /geo_loc_name="Japan: Niigata"
     gene            <1..1673
                     /gene="ezrA"
                     /locus_tag="O7798_001802"
     CDS             <1..1673
                     /gene="ezrA"
                     /locus_tag="O7798_001802"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500332.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="septation ring formation regulator EzrA"
                     /protein_id="HDC2864060.1"
                     /translation="IIVIILIAVGVLFYLRSNKRQIIEKAIERKNEIETLPFDQNLAQ
                     LSKLNLKGETKTKYDAMKKDNVESTNKYLAPVEEKIHNAEALLDKFSFNASQSEIDDA
                     NELMDSYEQSYQQQLEDVNEIIALYKDNDELYDKCKVDYREMKRDVLANRHQFGEAAS
                     LLETEIEKFEPRLEQYEVLKADGNYVQAHNHIAALNEQMKQLRSYMEEIPELIRETQK
                     ELPGQFQDLKYGCRDLKVEGYDLDHVKVDSTLQSLKTELSFVEPLISRLELEEANDKL
                     ANINDKLDDMYDLIEHEVKAKNDVEETKDIITDNLFKAKDMNYTLQTEIEYVRENYYI
                     NESDAQSVRQFENEIQSLISVYDDILKEMSKSAVRYSEVQDNLQYLEDHVTVINDKQE
                     KLQNHLIQLREDEAEAEDNLLRVQSKKEEVYRRLLASNLTSVPERFIIMKNEIDHEVR
                     DVNEQFSERPIHVKQLKDKVSKIVIQMNTFEDEANDVLVNAVYAEKLIQYGNRYRKDY
                     SNVDKSLNEAERLFKNNRYKRAIEIAEQALESVEPGVTKHIEEEVIKQ"
     gene            complement(1747..1887)
                     /locus_tag="O7798_001803"
     CDS             complement(1747..1887)
                     /locus_tag="O7798_001803"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500331.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDC2864061.1"
                     /translation="MIMLFSLLILIKTTHLITFIFKQLLFIFIVPFIYPYKKEARQRI
                     VG"
     gene            2036..3184
                     /locus_tag="O7798_001804"
     CDS             2036..3184
                     /locus_tag="O7798_001804"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500330.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine desulfurase"
                     /protein_id="HDC2864062.1"
                     /translation="MFILIYLDNAATTKAFEEVLDTYLKVNQSMYYNPNSPHKAGLQA
                     NQLLQQAKTQINAMINSKTNYDVVFTSGATESNNLALKGIAYRKFDTAKEIITSVLEH
                     PSVLEVVRYLEAHEGFKVKYVDVKKDGSINLEHFKELMSDKVGLVTCMYVNNVTGQIQ
                     PIPQMAKVIKNYPKAHFHVDAVQAFGKISMDLNNIDSISLSGHKFNGLKGQGVLLVNH
                     IQNVEPTVHGGGQEYGVRSGTVNLPNDIAMVKAMKIANENFEALNAFVTELNNDVRQF
                     LNKYHGVYINSSTSGSPFVLNISFPGVKGEVLVNAFSKYDIMISTTSACSSKRNKLNE
                     VLAAMGLSDKSIEGSIRLSFGATTTKEDIARFKEIFIIIYEEIKELLK"
     gene            3184..4407
                     /gene="thiI"
                     /locus_tag="O7798_001805"
     CDS             3184..4407
                     /gene="thiI"
                     /locus_tag="O7798_001805"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500329.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA 4-thiouridine(8) synthase ThiI"
                     /protein_id="HDC2864063.1"
                     /translation="MKYDHLLVRYGELTLKGSNRKKFVNQLRNNVNKSLKGLDGFVVK
                     GKRDRMYIELEDHADINEITYRLSKIFGIKSISPVLKVEKTIEAISAAAIKFAQQFEE
                     NSTFKIDVKRADKNFPMDTYELQRELGGAVLKHFDNISVNVKRPDHEIRVEVRLDAIY
                     MYEEVVPGSGGLPVGTGGKTLLMLSGGIDSPVAGMEVMRRGVTIEAIHFHSPPFTSDQ
                     AKEKVIELTRILAERVGPIKLHIVPFTELQKQVNKVVHPRYTMTSTRRMMMRVADKLV
                     HQIGALAIVNGENLGQVASQTLHSMYAINNVTSTPVLRPLLTYDKEEIIIKSKEIGTF
                     ETSIQPFEDCCTIFTPKNPVTEPNFDKVVQYESVFDFEEMINRAVENIETLEITSDYK
                     TIKEQQTNQLINDFL"
     gene            4451..5221
                     /locus_tag="O7798_001806"
     CDS             4451..5221
                     /locus_tag="O7798_001806"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500328.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TSUP family transporter"
                     /protein_id="HDC2864064.1"
                     /translation="MDLNLTMIIIIILFGFIAAFIDSVVGGGGLISTPALLAIGLPPS
                     VALGTNKLASSFGSLTSTIKFIRSGKVDLYVVAKLFGFVFLASACGAYIATMVPSQIL
                     KPLIIIALSSVFIFTLLKKDWGNTRTFTQFTFKKAIIFAALFILIGFYDGFVGGGTGS
                     FMLFVLLVFGFDFLSAAGNAKVLNFASNIGALVLFMVLGQVDYVIGLIMAISMIAGSY
                     AGAHFAIKQGVGYVKVLFIIITAILILKNAFDYIQQFV"
     gene            5319..5813
                     /gene="tpx"
                     /locus_tag="O7798_001807"
     CDS             5319..5813
                     /gene="tpx"
                     /locus_tag="O7798_001807"
                     /EC_number="1.11.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500327.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiol peroxidase"
                     /protein_id="HDC2864065.1"
                     /translation="MTEITFKGGPIHLKGQQINEGDFAPDFTVLDNDLNQVTLADYAG
                     KKKLISVVPSIDTGVCDQQTRKFNSDASKEEGIVLTISADLPFAQKRWCASAGLDNVI
                     TLSDHRDLSFGENYGVVMEELRLLARAVFVLDADNKVVYKEIVSEGTDFPDFDAALAA
                     YKNI"
     gene            5936..6883
                     /locus_tag="O7798_001808"
     CDS             5936..6883
                     /locus_tag="O7798_001808"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500326.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HDC2864066.1"
                     /translation="MAEQQTIMERLFHTLDEKAKTLNNENGQSFIENLGLAMEQVYTN
                     ERGLLEQSTLQDRRKAFQFAYLSLMQEEKIQANHQITPDSIGLILGFLVERFMNNQEE
                     LHIVDIASGAGHLSATVKEVLPEIAVMHHLIEVDPVLSRVSVHLANFLEIPFDVYPQD
                     AIMPLPLEEADIVIGDFPVGYYPIDERSKEFKLGFEEGHSYSHYLLIEQAINALKDAG
                     YAFLVVPSNIFTGEHVKQLEKYIATETEMQAFLNLPPTLFKNEKARKSILILQKKKSG
                     ETKPVEVLLANIPDFKIPSQFQGFMTELNQWMDTNRPKK"
     gene            6971..8173
                     /locus_tag="O7798_001809"
     CDS             6971..8173
                     /locus_tag="O7798_001809"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500325.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetate kinase"
                     /protein_id="HDC2864067.1"
                     /translation="MSKLILAINAGSSSLKFQLIRMPEEELVTKGLVERIGLKDSIFT
                     IEVNGEKVKTVQDIKDHVEAVDIMLDAFKAHNIINDINDIDGTGHRVVHGGEKFPESV
                     AITDEVEKEIEELSELAPLHNPANLMGIRAFRKLLPNIPHVAIFDTAFHQTMPEKAYL
                     YSLPYHYYKDYGIRKYGFHGTSHKFVSQRAAEMLDKPIEDLRIISCHIGNGASIAAID
                     GGKSIDTSMGFTPLAGVTMGTRSGNIDPALIPFIMEKTGKTAEQVLEILNKESGLLGL
                     SGTSSDLRDLSEEAESGKARSQMALDVFASKIHKYIGSYAARMHGVDVIVFTAGIGEN
                     SVEIRAKVLEGLEFMGVYWDPKKNENLLRGKEGFINYPHSPVKVVVIPTDEESMIARD
                     VMTFGGLK"
     gene            complement(8419..8919)
                     /locus_tag="O7798_001810"
     CDS             complement(8419..8919)
                     /locus_tag="O7798_001810"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500324.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="universal stress protein"
                     /protein_id="HDC2864068.1"
                     /translation="MITYKNILIAVDGSHEAEWAFNRAVGVAKRNDAKLTIVNVIDSR
                     TYSSYEVYDAQFTEKSKHFAEELLNGYKEVATNAGVKDVETRLEFGSPKSIIPKKLAH
                     EINADLIMSGTSGLNAVERFIVGSVSESIVRHAPCDVLVVRTEELPADFQPQVATTQL
                     REKYQN"
     gene            9060..10178
                     /gene="ald"
                     /locus_tag="O7798_001811"
     CDS             9060..10178
                     /gene="ald"
                     /locus_tag="O7798_001811"
                     /EC_number="1.4.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500323.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alanine dehydrogenase"
                     /protein_id="HDC2864069.1"
                     /translation="MKIGIPREIKNNENRVGLSPSGVHALVESGHTVLVETNAGSGSF
                     FEDVDYKEAGAEIVAEQAKVWDVDMVIKVKEPLESEYPYFKEGLVLFTYLHLANEEKL
                     TQALIDRKVISIAYETVQLPDRSLPLLSPMSEVAGRMSAQVGAEFLQKLNGGMGILLG
                     GVPGVPKGKVTIIGGGQAGTNAAKIALGLGADVTILDVNPKRLQQLDDLFGGRVHTIM
                     SNPLNIELYVKQSDLVIGAVLIPGAKAPRLVTEDMIKQMKNGSVIIDIAIDQGGIFET
                     TDKITTHDDPTYIKHGVVHYAVANMPGAVPRTSTLALNNATLPYALMLANKGYREAFK
                     SNQPLSLGLNTYKGHVTNKGVAEAFEMEYKSVEEALQL"
     gene            10302..10400
                     /locus_tag="O7798_001812"
     CDS             10302..10400
                     /locus_tag="O7798_001812"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500322.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDC2864070.1"
                     /translation="MNDIDLIHYMLLMNIPAYVFLACLLHIAFRLG"
     gene            complement(10494..11519)
                     /locus_tag="O7798_001813"
     CDS             complement(10494..11519)
                     /locus_tag="O7798_001813"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002458866.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminopeptidase P family protein"
                     /protein_id="HDC2864071.1"
                     /translation="MNNQQADAAWITTPLNVYYFTGYRSEPHERLFALLIKKDGKQVL
                     FCPKMEVEEVKASPFTGEIVGYLDTENPFSLYPQTINKLLIESEHLTVARQKQLISGF
                     NVNSFGDVDLTIKQLRNIKSEDEISKIRKAAELADKCIEIGVSYLKEGVTECEVVNHI
                     EQTIKQYGVNEMSFDTMVLFGDHAASPHGTPGDRRLKSNEYVLFDLGVIYEHYCSDMT
                     RTIKFGEPSKEAQEIYNIVLEAETSAIQAIKPGIPLKDIDHIARNIISEKGYGEYFPH
                     RLGHGLGLQEHEYQDVSSTNSNLLEAGMVITIEPGIYVPGVAGVRIEDDILVTNEGYE
                     VLTHYEK"
BASE COUNT         4060 a         1619 c         2152 g         3690 t
ORIGIN      
        1 caataattgt gattatattg attgctgtag gtgtattatt ctatttacgt tcaaataaac
       61 gacaaattat tgaaaaagca atcgaacgta aaaatgaaat tgagacgtta ccttttgatc
      121 aaaaccttgc acaattatct aagttgaatt taaaaggtga aacaaaaacg aaatacgatg
      181 caatgaaaaa ggacaacgta gaaagtacaa ataagtatct agctcctgtg gaagaaaaaa
      241 tccataatgc tgaggcttta ttagataaat ttagtttcaa cgcatctcaa agtgaaattg
      301 atgatgcaaa tgagttgatg gatagttacg aacaaagcta tcagcaacaa ttagaagatg
      361 taaatgaaat tattgcgtta tacaaagata atgatgaatt atatgacaaa tgtaaggttg
      421 attatcgtga aatgaaacgt gatgttttag caaatcgtca tcaatttggt gaggcagcaa
      481 gtctacttga aactgaaatt gaaaaatttg agccaaggtt agagcaatat gaagtactaa
      541 aagctgatgg taattatgta caagcgcaca accatatagc tgccttgaat gaacaaatga
      601 aacagctaag atcttatatg gaagaaatac cagaattaat tagagaaact caaaaagaat
      661 tacctggtca attccaagat ttaaaatatg gttgccgtga tcttaaagtt gaagggtatg
      721 atctggatca cgtgaaagta gacagtacat tacaaagctt aaaaacagag cttagtttcg
      781 ttgaaccatt aattagccgc ttagaattag aagaagctaa tgataaacta gctaatatca
      841 atgataagtt agatgacatg tatgatttaa ttgaacatga agttaaagct aaaaatgatg
      901 tcgaagaaac aaaagatatc attacggata acttattcaa agctaaagac atgaattata
      961 cattgcaaac agaaattgaa tatgtacgtg aaaactacta tataaatgaa tctgatgctc
     1021 agagtgttcg tcaatttgaa aatgaaattc aaagtttaat ttctgtatat gatgatattt
     1081 taaaagaaat gtctaaatct gctgtgcgat atagcgaggt tcaggataat ttacaatatt
     1141 tagaagatca tgtcacagtt attaatgaca aacaagaaaa gctacaaaat catctgattc
     1201 aattgcgtga agatgaagca gaagcagaag acaatctgct acgagtacaa tcgaagaaag
     1261 aagaagtgta tcgtcgatta cttgcttcta acttaacaag cgttcctgaa aggtttatca
     1321 tcatgaaaaa tgaaattgat catgaagttc gtgatgttaa cgaacaattt agtgaacgtc
     1381 caatacacgt taaacagtta aaagataaag tgtctaaaat tgtgattcaa atgaatacat
     1441 ttgaagatga agcaaatgat gttcttgtta atgctgttta tgcagagaaa ttaattcaat
     1501 atggaaatag atatcgtaag gactatagca atgttgataa gagcttaaat gaagctgaac
     1561 gattatttaa aaataatcgc tataagcgtg cgattgaaat tgcagagcaa gctcttgaaa
     1621 gtgttgagcc aggtgttact aaacatattg aagaagaagt tattaagcaa tagaaactag
     1681 tatgtagtta tacttaaata atatgagcac tctgtcaaat tggactgatg agtttaataa
     1741 ttgaagttag ccaacgatac gttgtctagc ttctttttta tatggataaa tgaaagggac
     1801 aataaatata aatagcaatt gtttaaagat aaacgtaatc aaatgtgttg ttttaattaa
     1861 tataagtagt gaaaaaagca taatcacaca gctgtttaaa tagagtgaaa tagtctaatt
     1921 cttatttaat aagtagaaat aagattattt tgcgctataa cctttatttt ttgtcggata
     1981 atagtataat gcttgagtaa aacaatttta acgattgatg attaatgaaa gagaagtgtt
     2041 tattttgata tatctagata atgcggcaac gacgaaagca tttgaagaag tgttagatac
     2101 ttatttaaaa gtaaatcaat caatgtatta taatccgaat agtccgcata aagctggttt
     2161 gcaggcaaat caattactac aacaagcaaa aacccaaatt aatgcaatga ttaattcaaa
     2221 aacaaattat gatgttgtat tcactagtgg tgcaactgaa tccaataatc ttgctttaaa
     2281 aggtattgcc tatcgtaaat ttgatacagc gaaggaaata attacatccg tgttagagca
     2341 tccgtccgta ttagaggttg taagatattt ggaagcacac gaagggttta aagttaaata
     2401 tgttgatgta aagaaagatg gcagtattaa cttagaacac ttcaaagaat taatgtcaga
     2461 caaagtcggt ttagtaacat gtatgtatgt aaataatgta actggacaaa tacagcctat
     2521 tccacaaatg gctaaagtta taaaaaatta tcctaaggca cattttcatg tagatgcggt
     2581 tcaagcattc ggcaaaattt caatggatct caataacata gatagtatta gtttaagtgg
     2641 acacaagttt aatggtttaa aaggacaagg cgtcttactt gtaaatcaca ttcaaaatgt
     2701 tgaaccaact gtccatggtg gtggtcaaga atatggcgtt agaagtggaa cagttaattt
     2761 gccaaatgat attgcaatgg ttaaagcgat gaagatagct aatgaaaact ttgaagcatt
     2821 gaatgcattt gttactgagt taaataatga cgtccgtcaa tttttaaata aatatcatgg
     2881 agtttatatt aattcttcaa cttcaggttc accattcgtt ttaaatatta gttttcctgg
     2941 cgtaaaaggt gaagtattag ttaatgcttt ttcaaaatat gacattatga tatctacgac
     3001 aagtgcttgt tcatctaaac gtaataaatt aaatgaagta ttggctgcaa tgggattatc
     3061 agacaaatct attgaaggta gtataagatt atcatttggg gctactacaa ctaaagaaga
     3121 tatagcgagg tttaaagaaa tatttatcat catttatgag gaaattaagg agttgctaaa
     3181 ataatgaagt atgatcactt gcttgttaga tacggggagt taacattaaa gggttcaaat
     3241 agaaagaaat ttgtaaatca attaagaaat aatgtaaata agtcattaaa aggacttgat
     3301 gggtttgtcg ttaaaggcaa acgagatcgt atgtatattg aacttgaaga ccatgcagat
     3361 ataaatgaaa taacatatcg attatcaaaa attttcggta ttaaatctat tagtccagta
     3421 ttaaaagtag aaaaaacaat agaggcaata agtgcagcgg caattaaatt tgcgcagcaa
     3481 tttgaagaaa acagcacatt taaaattgat gtgaagcgtg ccgataaaaa tttcccaatg
     3541 gatacgtatg aattacagcg tgaattgggt ggtgcagtat tgaagcactt cgacaatatt
     3601 tcagtgaatg tcaaacgtcc agatcatgaa attcgagtgg aagttagatt agatgcaatt
     3661 tatatgtatg aagaagttgt tccgggttca ggtggattac cagttggtac tggtggtaag
     3721 acgttactaa tgctttcagg cggtatagac tcaccagttg ctgggatgga agtgatgaga
     3781 cgtggcgtaa caattgaagc gattcatttc catagtccac catttacaag tgatcaagca
     3841 aaagaaaaag ttattgaatt gacacgtatt ttagctgaac gtgttggacc aattaaattg
     3901 catattgtac catttacaga attgcaaaaa caggtaaata aagttgtaca tccaagatat
     3961 acaatgactt caacgagacg tatgatgatg cgtgttgctg ataaattagt acatcaaata
     4021 ggggctttag ctattgtaaa tggtgaaaac ctagggcagg tagccagtca aacacttcat
     4081 agcatgtatg caattaataa tgtaacttct actcctgtat tacgtccttt attaacttac
     4141 gataaagaag aaattattat taaatcgaaa gaaattggta catttgaaac atctattcaa
     4201 ccatttgaag attgttgtac aattttcacc cctaaaaatc cagtaaccga accaaacttt
     4261 gataaggtag tccaatatga aagtgtcttt gattttgaag agatgattaa tcgtgctgtt
     4321 gaaaatattg aaacacttga aataactagt gattataaaa ctattaaaga acagcaaaca
     4381 aaccaattaa taaacgactt tttataaata aaatcctaga gtaaatttaa acataagggg
     4441 atgttaaact atggatttga acttaacgat gattataatc ataattttat ttggttttat
     4501 cgcggcgttt atagattcgg ttgtaggggg tggcggttta atttctacgc cagcattatt
     4561 agcaatcggt ctaccaccat ctgtggcttt aggtacaaat aaattggcaa gttcgtttgg
     4621 ttctttaact agtacgataa agtttataag gtccggtaaa gtggacttat atgttgttgc
     4681 caaattattt ggttttgtat ttttggcatc tgcatgtggc gcatatattg caacgatggt
     4741 tccgtcacaa atattgaaac ctttaatcat cattgcactt tcgtcggtgt ttatattcac
     4801 attacttaaa aaagattggg gcaatacacg cacgtttact caatttacat ttaagaaagc
     4861 cataatattt gcagcacttt ttatattaat cggcttttat gatggatttg taggtggggg
     4921 aacaggttca tttatgcttt ttgtattgtt agtctttggt tttgattttt taagtgcagc
     4981 aggaaatgct aaagttttga actttgcttc taatataggt gcgcttgtat tatttatggt
     5041 attaggacaa gtagattatg taataggttt aattatggct ataagtatga ttgctgggtc
     5101 atatgctggg gctcattttg ctattaaaca aggtgttggt tatgtaaaag tattatttat
     5161 tattattact gctattttaa ttttaaaaaa tgcttttgat tatattcaac aatttgtata
     5221 aaattaaatt tgcttttgat taaagcatga aaattgtaat caaaccataa attgtcgtat
     5281 gatgtagtta gaattttaaa atgcaggagg tcaagtatat gactgaaata acattcaaag
     5341 gtggaccaat ccacttaaaa ggtcaacaaa ttaatgaagg tgattttgca cctgatttta
     5401 cagtgttaga taatgactta aatcaagtaa cattagcaga ttatgctggt aaaaagaaat
     5461 taattagtgt ggtaccatca attgatacag gtgtttgtga tcagcagact cgcaaattca
     5521 actctgatgc ttctaaagaa gaggggattg tgcttacaat ttcagcagac ttaccattcg
     5581 cacaaaaaag atggtgcgct tcagcaggtt tagacaatgt cattacatta agtgaccacc
     5641 gtgacttatc atttggtgaa aactatggcg ttgttatgga agaacttcgc ttattagctc
     5701 gtgcagtatt tgtattagat gcagataata aagttgttta taaagaaatc gttagtgaag
     5761 gtactgattt cccagatttt gatgctgctt tagctgcata caaaaatatt taatcattaa
     5821 agagataaat cttaaaatgt atacatcgtg tccatcgttg tcaacagcat taaaatagaa
     5881 ttgttttcta tgattgctaa gacctatggg cactttttat tggagaggga cgaatatggc
     5941 agaacaacaa acaattatgg aacgcttgtt tcatacatta gatgaaaaag ctaaaacatt
     6001 aaataatgaa aatggccaaa gttttattga aaatcttggg ctagcaatgg aacaagtata
     6061 taccaatgaa agaggattgt tagaacaatc gacgttacaa gatcgacgta aagcattcca
     6121 atttgcatat ttaagtttaa tgcaggaaga aaagatacaa gcaaatcatc aaattacacc
     6181 agattcaatt ggattgatac taggattttt agttgagcgt tttatgaaca accaagaaga
     6241 attacatatt gttgatattg caagtggtgc cggtcattta agtgctactg taaaagaagt
     6301 gttacctgaa attgcggtta tgcatcattt aattgaagtt gatccagttt tatcacgtgt
     6361 tagtgtacat ttagcaaact tcttagaaat tcctttcgat gtgtatcctc aagatgccat
     6421 catgccacta ccattagaag aagcagatat cgttattggt gattttccag taggctatta
     6481 tccaattgat gaaagaagta aggagtttaa gctaggtttt gaagaaggac atagttattc
     6541 acattattta ttaatagaac aagcaataaa tgcattaaaa gatgctggat atgcctttct
     6601 agtggtacca agtaatattt ttacaggtga acatgtaaaa cagcttgaaa aatatattgc
     6661 aacagagaca gagatgcaag catttttaaa tttaccacca actttattta aaaatgaaaa
     6721 agcgcgaaaa tctatattaa ttttacaaaa gaaaaaatcg ggtgaaacaa agccagttga
     6781 agtattattg gcaaatattc ctgatttcaa aattccttca caatttcaag gatttatgac
     6841 agagttaaat cagtggatgg acacaaatcg tcctaaaaaa taatctgtaa tagtatagtc
     6901 ataaaactgt atgaatgata aaatgaaaaa tgaaatagta taaaaagcaa acgatggagg
     6961 atcattactt atgtcaaaat taatcttggc tatcaatgct ggtagttcat cattaaaatt
     7021 tcaattaatt agaatgcctg aagaggaatt agtaacaaaa ggtttagtag aaagaatcgg
     7081 attgaaggat tcaattttta caattgaagt caacggggaa aaagttaaaa cagtacaaga
     7141 tatcaaggat cacgttgagg cagttgatat catgttggat gcttttaaag cgcacaatat
     7201 tattaatgat attaacgata tcgatggaac aggtcaccgt gttgtacatg gtggtgaaaa
     7261 attccctgaa tcagtagcta ttactgatga ggttgaaaag gaaattgaag aattaagcga
     7321 attagcaccg cttcacaacc cagctaactt gatgggtatt cgtgctttcc gtaaattatt
     7381 accaaatatc cctcatgtgg caatttttga tacagcattc catcaaacaa tgcctgaaaa
     7441 agcatatcta tatagcttgc catatcatta ttataaagat tatggcattc gtaagtatgg
     7501 tttccatggt acaagccata aatttgtatc acaaagagcg gcagaaatgt tagataagcc
     7561 aattgaagat ttacgtatta tttcatgtca cattggtaat ggagcatcaa ttgcagctat
     7621 cgatggcggt aaatctattg atacatcaat gggcttcaca ccacttgctg gtgtaacaat
     7681 gggtactcgt tctggtaata ttgaccctgc tttaattcca tttattatgg aaaaaacagg
     7741 taaaactgct gaacaagtat tggaaatctt aaacaaagaa tcaggtttat taggattatc
     7801 aggtacatct agtgatttac gtgacttatc agaagaagct gaatcaggta aagcacgttc
     7861 acaaatggct ttagatgtat ttgcttctaa aattcacaaa tatattggat catatgctgc
     7921 gagaatgcat ggtgttgatg ttatcgtatt tacagcaggt atcggtgaaa actcagtaga
     7981 aattcgtgcg aaagttcttg aaggcttaga atttatgggt gtttactggg atcctaagaa
     8041 aaatgaaaac ttactacgtg gtaaagaagg atttattaac tatcctcatt caccagttaa
     8101 agttgtcgtt attccaacag atgaagaaag tatgattgcc cgtgatgtta tgacattcgg
     8161 tggtttaaaa taatttttaa ataaatatta agcgtctatc tccgctacaa ttatatgtag
     8221 gaggtagacg ctttttgtat tgtttgaaaa ttaactagtg taatgtctct tttcacgaat
     8281 atcttaaaga attaagtagt cgaagaagat tatgaaaaca ttattaagtg agttttattt
     8341 ataaacaata aaaaaccaag tgcagaaagt tgcacttggt tcataatgat caagtagtta
     8401 tctaatgatc atctatattt aattttgata tttttcacgt aattgagttg ttgcaacttg
     8461 tggttggaag tctgctggta actcttcagt acgaacaact aacacgtcac atggcgcatg
     8521 acgaacgata gattctgata cagaaccaac aataaatctt tccacggcat ttaagcctga
     8581 tgtaccactc ataatcaagt ctgcattaat ttcatgtgca agctttttag gaatgataga
     8641 tttaggagag ccaaactcta gacgcgtttc tacatcttta acaccagcgt tagtagctac
     8701 ttctttataa ccatttaata attcttctgc aaaatgctta gatttttcag taaattgagc
     8761 atcataaact tcataagaag aatacgttct tgaatcaatt acattcacaa ttgttaactt
     8821 cgcatcgtta cgtttagcaa caccaactgc tctgttaaat gcccattccg cttcatgtga
     8881 accgtcaact gcgattaaaa tatttttgta agtaatcata gtaagtgcct ccttgttctt
     8941 tcttaattat attttaccac aattttcgga aaagtcagtg taataacctt tacaattttg
     9001 tggatttttg attgcgcttt caaaatgttc gcgttaagat gattatggag gtggatggta
     9061 tgaaaattgg tataccaagg gagattaaaa ataatgaaaa tcgtgttggt ttatcaccaa
     9121 gtggtgtgca cgctttagta gaaagtgggc atactgtttt agtggaaaca aatgcgggtt
     9181 caggatcatt ctttgaagat gtagattaca aagaagcagg tgctgagatt gttgctgaac
     9241 aagcaaaagt ttgggatgtg gatatggtta ttaaagttaa agaaccactt gaatctgaat
     9301 atccatattt taaagaaggg cttgtattat tcacttatct tcatttagca aatgaagaaa
     9361 aattaacaca agctttgata gatagaaaag taattagtat tgcatatgag actgtgcagt
     9421 taccagaccg atctttacca ttgttatcac caatgagtga ggtagcagga agaatgtcag
     9481 ctcaagttgg cgcagagttc ctacaaaaac ttaatggtgg tatgggaatt ctactaggtg
     9541 gtgtcccagg agtacctaag ggtaaagtaa ctattatcgg tggtggtcaa gcaggaacaa
     9601 atgcagctaa aattgcacta ggactaggtg cagatgttac gattttagat gttaatccaa
     9661 agcgtttaca acaattagat gatttattcg gtggacgtgt acatacaatt atgtcaaatc
     9721 cgttgaatat tgagttgtat gttaaacaaa gtgatttagt aataggtgca gttttaattc
     9781 caggtgctaa agcgccaaga cttgtaacag aagacatgat taaacaaatg aaaaatgggt
     9841 cagttattat tgacattgct attgatcaag gcggtatttt tgaaacaact gataaaatta
     9901 cgacacatga tgatcctaca tatattaagc atggtgtggt tcattatgca gttgcaaata
     9961 tgccaggtgc agtaccgcgt acttcgacgt tagctttaaa taatgctacg ctaccttatg
    10021 cgctcatgct agctaataaa gggtatagag aagcatttaa atcaaatcaa ccattatcat
    10081 taggtttaaa tacttacaaa ggtcacgtaa ccaataaagg cgttgcagag gcatttgaaa
    10141 tggaatataa atctgtagaa gaagcattac aattataatt tgaatttgat gaaaagggaa
    10201 tggattacag cgcactaaag aatgacgtta tcatctcctt ggttattaaa attaaataat
    10261 gataaattaa agctagaaac aatgcgaaga aatcatcgaa catgaatgat attgatttga
    10321 ttcattacat gttactgatg aacatacctg catatgtgtt tctagcttgt ttgttacata
    10381 ttgcatttag acttggataa aaatttatgt cttaggcgct acaatgttat attggcagtg
    10441 tttgactgaa tgagaatgcg cttgtaacaa gcttttcatt tttatcccac tccttatttt
    10501 tcgtaatgtg ttaatacttc atatccttca ttagtgacaa gtatgtcatc ttcaattctt
    10561 acacctgcaa caccaggtac ataaatacct ggttcgattg taataaccat gccagcttct
    10621 aacaaattag aattagtact tgaaacatct tgatattcat gttcttgtaa tcctaggcca
    10681 tgacctaagc gatgagggaa atattcacca taaccttttt ctgaaataat atttctagcg
    10741 atatgatcga tatcttttaa tggtattcca ggtttaattg cttggattgc agatgtttct
    10801 gcttctaata caatattata aatttcttgt gcttctttgc taggttcacc aaatttaata
    10861 gtacgtgtca tatcgctaca ataatgctca taaattacac ctaaatcaaa tagtacatat
    10921 tcattgcttt ttaatctgcg atctcctggt gtgccatgag gtgatgcggc atgatctcca
    10981 aataaaacca tcgtatcaaa actcatttca ttgacgccat attgtttgat agtttgctca
    11041 atatggttga ctacttcaca ttcagtcaca ccttctttta aataagaaac acctatttcg
    11101 atacacttat ctgctaactc agcagcttta cgtattttgc taatttcatc ttcggattta
    11161 atatttctca attgtttgat tgttaaatca acatctccga atgaattgac attgaaacca
    11221 gagattaatt gtttttggcg tgctactgtt aagtgctcgc tttcaattag taatttattg
    11281 attgtttgag gataaagtga aaaagggttt tcagtgtcta aatatccaac gatttcacct
    11341 gtgaaaggtg atgctttgac ttcttcgact tccatttttg gacaaaatag tacttgttta
    11401 ccatctttct taatcaataa tgcaaataat ctttcatggg gttcgctacg gtatccagta
    11461 aaataatata cattcaacgg tgttgtaatc catgctgcat cagcttgttg attgttcaat
    11521 t
//
LOCUS       DALPQQ010000083        11370 bp    DNA     linear   BCT 22-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus strain K18-6-464
            SAMD00233528-rid16434743.denovo.083, whole genome shotgun sequence.
ACCESSION   DALPQQ010000083 DALPQQ010000000
VERSION     DALPQQ010000083.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMD00233528
            Sequence Read Archive: DRR236061
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 11370)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11370)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001543423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001543423.1
            Genome Coverage       :: 77x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/22/2022 17:09:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,811
            CDSs (total)                      :: 2,743
            Genes (coding)                    :: 2,689
            CDSs (with protein)               :: 2,689
            Genes (RNA)                       :: 68
            rRNAs                             :: 2, 4, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 4, 2 (16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 54
            CDSs (without protein)            :: 54
            Pseudo Genes (ambiguous residues) :: 0 of 54
            Pseudo Genes (frameshifted)       :: 27 of 54
            Pseudo Genes (incomplete)         :: 27 of 54
            Pseudo Genes (internal stop)      :: 10 of 54
            Pseudo Genes (multiple problems)  :: 10 of 54
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11370
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMD00233528-rid16434743.denovo.083"
                     /strain="K18-6-464"
                     /db_xref="taxon:1280"
                     /geo_loc_name="Japan: Niigata"
     gene            173..376
                     /locus_tag="O7798_001814"
     CDS             173..376
                     /locus_tag="O7798_001814"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501300.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDC2864072.1"
                     /translation="MQLSHSVKVAISIYLALIFITFTSYLVIILYTSMTGHDVSHFVL
                     DSQHSHHGSLTQKHLSLPEISFK"
     gene            559..1494
                     /locus_tag="O7798_001815"
     CDS             559..1494
                     /locus_tag="O7798_001815"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501301.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EamA family transporter"
                     /protein_id="HDC2864073.1"
                     /translation="MRYLANNHSALRLKGIILAIVGACLWGLGGTVSDFLFKYKNINV
                     DWYVTARLVVSGVFLLIMYKMMQPKRSIFSVFQDRRMLGKLLIFSILGMLVVQYAYMA
                     SINTGNAAIATLLQYIAPVYIIIWFVIRGVAKLTLFDVLAIIMTLLGTFLLLTNGSFS
                     NLVVNPASLFWGILAGVALAFYTIYPSDLLNRFGSILIVGWAMLISGVAMNLRHPIWH
                     IDITKWDISIILFLIFGIIGGTALAFYFFIDSLQYISAKETTLFGTVEPVVAVIASSL
                     WLHVAFKPFQIVGIILIMILILLLSLKRQPETLDE"
     gene            complement(1576..2544)
                     /locus_tag="O7798_001816"
     CDS             complement(1576..2544)
                     /locus_tag="O7798_001816"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501302.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HDC2864074.1"
                     /translation="MRKKWSTLAFGFLVAAYAHIRIKEKRSVKSYMLEQGIRLSRAKR
                     RFMYKEEAMKALEKMAPQTAGEYEGTNYQFKMPVKVDKHFGSTVYTVNDKQDKHQRVV
                     LYAHGGAWFQDPLKIHFEFIDELAETLNAKVIMPVYPKIPHQDYQATYVLFEKLYHDL
                     LNQVADSKQIVVMGDSAGGQIALSFAQLLKEKHIVQPGHIVLISPVLDATMQHPEIPD
                     YLKKDPMVGVDGSVFLAEQWAGDTPLDNYKVSPINGDLDGLGRITLTVGTKEVLYPDA
                     LNLSQLLSAKGIEHDFIPGYYQFHIYPVFPIPERRRFLYQVKNIIN"
     gene            complement(2677..3021)
                     /locus_tag="O7798_001817"
     CDS             complement(2677..3021)
                     /locus_tag="O7798_001817"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501303.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin family protein"
                     /protein_id="HDC2864075.1"
                     /translation="MVKQLNSVEAFREFIHQYPLAVVHVMRDQCSVCHAVLPQIEDLM
                     QSYPNVPLAVINQSQVEAIAGELNIFTVPVDLIFMNGKEMHRQGRFIDMQRFEHHLKQ
                     MNDSVNNDVDEH"
     gene            complement(3063..3473)
                     /locus_tag="O7798_001818"
     CDS             complement(3063..3473)
                     /locus_tag="O7798_001818"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501304.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA thioesterase"
                     /protein_id="HDC2864076.1"
                     /translation="MTTEGLLVAEKEIEVNGYDIDAMGVVSNIVYIRWFEDLRTAFIN
                     QHMNYSTMINQGISPILMKTEAEYKVPVTIHDKPVGRIYLVKASKMKWVFQFEIVSAH
                     GVHCIGTQTGGFYRLSDKKITSVPQVFQDILATK"
     gene            complement(3853..5919)
                     /locus_tag="O7798_001819"
     CDS             complement(3853..5919)
                     /locus_tag="O7798_001819"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501305.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS transporter subunit IIABC"
                     /protein_id="HDC2864077.1"
                     /translation="MFKKLFGQLQRIGKALMLPVAILPAAGILLAFGNAMHNEQLVEI
                     APWLKNDIIVMISSVMEAAGQVVFDNLPLLFAVGTALGLAGGDGVAALAALVGYLIMN
                     ATMGKVLHITIDDIFSYAKGAKELSQAAKEPAHALVLGIPTLQTGVFGGIIMGALAAW
                     CYNKFYNITLPPFLGFFAGKRFVPIVTSVVAIATGVLLSFAWPPIQDGLNSLSNFLLN
                     KNLTLTTFIFGIIERSLIPFGLHHIFYSPFWFEFGSYTNHAGELVRGDQRIWMAQLKD
                     GVPFTAGAFTTGKYPFMMFGLPAAAFAIYKNARPERKKVVGGLMLSAGLTAFLTGITE
                     PLEFSFLFVAPVLYGIHVLLAGTSFLVMHLLGVKIGMTFSGGFIDYILYGLLNWDRSH
                     ALLVIPVGIVYAIVYYFLFDFAIRKFKLKTPGREDEETEIRNSSVAKLPFDVLDAMGG
                     KENIKHLDACITRLRVEVVDKSKVDVAGIKALGASGVLEVGNNMQAIFGPKSDQIKHD
                     MAKIMSGEITKPSETTVTEEMSDEPVHVEALGTTDIYAPGIGQIIPLSEVPDQVFAGK
                     MMGDGVGFIPEKGEIVAPFDGTVKTIFPTKHAIGLESESGVEVLIHIGIDTVKLNGEG
                     FESLINVDEKVTQGQPLMKVNLAYLKAHAPSIVTPMIITNLENKELVIEDVQDADPGK
                     LIMTVK"
     gene            complement(6220..7959)
                     /locus_tag="O7798_001820"
     CDS             complement(6220..7959)
                     /locus_tag="O7798_001820"
                     /EC_number="1.2.3.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501306.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyruvate oxidase"
                     /protein_id="HDC2864078.1"
                     /translation="MAKIKANEALVKALQAWDIDHLYGIPGDSIDAVVDSLRTVRDQF
                     KFYHVRHEEVASLAAAGYTKLTGKIGVALSIGGPGLIHLLNGMYDAKMDNVPQLILSG
                     QTNSTALGTKAFQETNLQKLCEDVAVYNHQIEKGDNVFEIVNEAIRTAYEQKGVAVVI
                     CPNDLLTEKIKDTTNKPVDTSRPTVVSPKYKDIKKAVKLINKSKKPVMLIGVGAKHAK
                     DELREFIEMAKIPVIHSLPAKTILPDDHPYSIGNLGKIGTKTSYQTMQEADLLIMVGT
                     NYPYVDYLPKKNIKAIQIDTNPKNIGHRFNINVGIVGDSKIALHQLTENIKHVAERPF
                     LNKTLERKAVWDKWMEQDKNNNSKPLRPERLMASINKFIKDDAVISADVGTATVWSTR
                     YLNLGVNNKFIISSWLGTMGCGLPGAIASKIAYPNRQAIAIAGDGAFQMVMQDFATAV
                     QYDLPLTVFVLNNKQLAFIKYEQQAAGELEYAVDFSDMDHAKFAEAAGGKGYTIKSAS
                     EVDAIVEEALAQDVPTIVDVYVDPNAAPLPGKIVNEEALGYGKWAFRSITEDKHLDLD
                     QIPPISVAAKRFL"
     gene            complement(8006..8695)
                     /locus_tag="O7798_001821"
     CDS             complement(8006..8695)
                     /locus_tag="O7798_001821"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501307.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LrgB family protein"
                     /protein_id="HDC2864079.1"
                     /translation="MNDYVQALLMILLTVVLYYFAKRLQQKYPNPFLNPALIASLGII
                     FVLLIFGISYNGYMKGGSWINHILNATVVCLAYPLYKNREKIKDNVSIIFASVLTGVM
                     LNFMLVFLTLKAFGYSKDVIVTLLPRSITAAVGIEVSHELGGTDTMTVLFIITTGLIG
                     SILGSMLLRFGRFESSIAKGLTYGNASHAFGTAKALEMDIESGAFSSIGMILTAVISS
                     VLIPVLILLFY"
     gene            complement(8688..9083)
                     /gene="cidA"
                     /locus_tag="O7798_001822"
     CDS             complement(8688..9083)
                     /gene="cidA"
                     /locus_tag="O7798_001822"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501308.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="holin-like murein hydrolase modulator CidA"
                     /protein_id="HDC2864080.1"
                     /translation="MHKVQLIIKLLLQLGIIIVITYIGTEIQKIFHLPLAGSIVGLFL
                     FYLLLQFKIVPLTWVEDGANFLLKTMVFFFIPSVVGIMDVASEITLNYILFFAVIIIG
                     TCIVALSSGYIAEKMSVKHKHRKGVDAYE"
     gene            complement(9296..10174)
                     /locus_tag="O7798_001823"
     CDS             complement(9296..10174)
                     /locus_tag="O7798_001823"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000351767.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HDC2864081.1"
                     /translation="MDIKHMKYFIEVVKQGGMTNASKSLYIAQPTISKAIKDIENEMG
                     TPLFDRSKRHLILTDAGQIFYEKSKEIVALYDYLPSEMERLNGLETGHINMGMSAVMN
                     MKILINILGAFHQQYPNVTYNLIENGGKTIEQQIINDEVDIGVTTLPVDHHIFDYTTL
                     DKEDLRLIVSREHRLAKYETVKLEDLAGEDFILFNKDFYLNDKIIENAKNVGFVPNTV
                     AQISQWHVIEDLVTNELGISILPTSISEQLNGDVKLLRIEDAHVHWELGVVWKKDKQL
                     SHATTKWIEFLKDRLG"
     gene            10341..10559
                     /locus_tag="O7798_001824"
     CDS             10341..10559
                     /locus_tag="O7798_001824"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501310.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sterile alpha motif-like domain-containing
                     protein"
                     /protein_id="HDC2864082.1"
                     /translation="MSFYEFMQSFLGDDTPLGELVDWINQDSNFPREVKSHSEILSYF
                     RTNPCPESISVPVIKRALSVFNQFTNVQ"
     gene            10949..>11370
                     /locus_tag="O7798_001825"
     CDS             10949..>11370
                     /locus_tag="O7798_001825"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501311.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CHAP domain-containing protein"
                     /protein_id="HDC2864083.1"
                     /translation="MEYKKILIRLLIAFAVLFSADFTYQSVEQTHQSHAAVNYYSKNQ
                     CTWWAFKRRAQVGKPVSNRWGNAKNWYYNARKSKYATGRTPRKFAVMQSTAGYYGHVA
                     VVEQVYKNGSIKVSEYNFYRPLKYNTRVLSKKAARNFN"
BASE COUNT         3544 a         2140 c         1713 g         3973 t
ORIGIN      
        1 tttgcaataa gataattaaa gtaggatatt atttttagtt ttctgatagg aatgatgata
       61 gtctataggt tgaatcttta ctttttttta aagctaaatt tacatcaact taacaatggt
      121 tggttatact gaagatgaaa atatttagta taacttagtg gaggcgataa aggtgcaatt
      181 gagtcattcc gttaaagttg caatttctat ctatttagca cttatcttta taacgttcac
      241 ttcttattta gtcattattt tatatacgag tatgactgga catgatgtat cacatttcgt
      301 gttagatagt cagcattctc atcatggatc tcttacgcaa aaacatttga gtcttcctga
      361 aatctcattt aaatagttta tcctctgtgt ttcaacattc atttcccata tcgattcatt
      421 tatctatcat ctagaccact acatcttaga tgattttttt attttctcat ttcactcttt
      481 cttaaaagtc gatataatga attaaatcat tatcatacac cgacatattt tatgttgttg
      541 gtgttaagtt ttaaaggggt gagatacttg gcgaataatc attcagcttt gcgtttaaaa
      601 ggaattatac ttgccattgt cggtgcttgt ttatggggat taggtggtac tgtttctgat
      661 ttcttgttca aatataagaa tattaatgtc gattggtacg tcactgctcg acttgtagtc
      721 agtggtgttt tcttacttat tatgtacaaa atgatgcaac ccaaacgttc aatatttagc
      781 gtattccaag atcgacgtat gttaggcaaa ttacttatct tcagtatact gggcatgtta
      841 gtagtacaat atgcttatat ggcatctatt aatacaggta atgctgcgat tgcaacatta
      901 ctacaataca ttgcgccagt ttatattatt atttggtttg tcataagagg cgttgcaaaa
      961 ctaacattat ttgatgtgct tgctattatc atgacactat taggaacatt tttattatta
     1021 acaaatggtt cattttctaa tttagtcgtc aatcctgcaa gtttattctg gggtatttta
     1081 gctggtgtag cactcgcttt ttacacaatt tatccttcag acctacttaa ccgcttcggt
     1141 tcgattctaa ttgtcgggtg ggcaatgctt atttctggtg ttgcgatgaa tttacgccat
     1201 ccaatttggc acattgatat cactaaatgg gacatatcaa ttatattatt tttaatcttt
     1261 ggtattatcg gtggtaccgc actcgcattt tatttcttta tcgacagttt acaatacata
     1321 tcagcgaaag aaacaacatt attcggaact gttgaacctg tcgtagccgt tatcgcaagc
     1381 agtctatggt tacatgtggc attcaaacca tttcaaatcg taggcatcat tcttattatg
     1441 attttaattt tattactatc acttaaaaga caacctgaaa cattagatga ataagaaaac
     1501 tctgataatc actttagcaa gtaactatta tttaacaacg tagttacctt ataggtgata
     1561 tcagagtttt ttattttagt taataatatt tttcacttgg tataaaaagc gtcgtcgctc
     1621 tggtatcgga aatactggat aaatatggaa ttggtaatat ccaggtataa agtcatgttc
     1681 gatacctttc gcactcaaca attgcgataa gttcaaagca tctgggtaca gtacttcttt
     1741 tgtaccaaca gttaatgtaa tacgacctaa accatctaag tcaccattaa ttggtgatac
     1801 tttgtagtta tctaaaggtg tgtcccctgc ccattgttca gctaagaaca cactgccatc
     1861 cacacctacc attgggtctt tctttaagta gtcaggaatt tcaggatgct gcatcgttgc
     1921 atctaaaact ggtgaaatta atacaatatg tcctggttgc acaatatgtt tttcttttaa
     1981 caattgagca aatgataaag caatttgacc gcccgcagag tcacccatta caacgatttg
     2041 tttagaatct gctacttgat tcaataaatc atggtacaac ttttcaaaaa gcacatacgt
     2101 cgcttgataa tcttgatgcg gaatcttcgg atatactggc atgatgactt tagcattgag
     2161 tgtttctgca agttcatcaa taaattcgaa atgaattttg agtgggtctt ggaaccatgc
     2221 gcctccatgt gcatataata caacgcgttg atgcttatct tgtttatcgt taacggtata
     2281 aacggttgaa ccgaagtgct tatccacttt tactggcatc ttaaactgat aattggttcc
     2341 ctcatattcg cctgctgtct gtggcgccat tttttctaat gctttcatcg cttcttcttt
     2401 atacataaaa cgacgcttag ctctagataa tcgtatacct tgttctaaca tataactttt
     2461 cacactgcgt ttttctttaa ttctaatatg tgcgtatgct gcaactaaaa atccaaacgc
     2521 aagtgtagac cattttttac gcatttgtcg tcactcctct ttgatgattt ctactatagt
     2581 tctactgtac catgctgatt ctaattacta ccaatattta ctgggaaata agttatgatg
     2641 tctacataat cttagcaatg ctaatcattt gcgatattaa tgctcatcga catcgttatt
     2701 tacactatca ttcatttgct taagatgatg ttcaaaacgt tgcatatcga taaaacgccc
     2761 ttgacgatgc atttcttttc cattcataaa aattaaatcc acaggtacag tgaaaatatt
     2821 taattctcca gcaatagctt ccacctgact ttgattaatc acagctaatg gcacattggg
     2881 atatgattgc atcaagtctt caatttgtgg taaaacggca tgacacacgc tacactgatc
     2941 gcgcatgaca tgtacaactg ctaacggata ttgatgaata aattcacgga atgcttcgac
     3001 actatttaat tgcttaacca tttcgaacac cttcttactt tttatatttt aaaatgaagt
     3061 cattattttg ttgctaaaat gtcttgaaac acttgtggca cagaggttat cttcttatca
     3121 ctcaatctgt aaaaaccgcc tgtctgtgta ccaatacaat gcacgccatg tgcggacaca
     3181 atttcaaact gaaacaccca tttcatcttg cttgctttaa ctaagtaaat acgacctact
     3241 ggtttgtcat gtattgtgac aggtacttta tactctgctt ccgttttcat aagtataggt
     3301 gaaatgcctt gattgatcat tgttgagtaa ttcatgtgct gattaataaa cgctgttctc
     3361 aaatcttcga accatctaat ataaacgata ttactaacga cacccatcgc atcaatgtcg
     3421 taaccattca cttcgatttc tttctctgca actaatagac cttctgttgt cataatgaca
     3481 aatctcctta tcttacaaat agatttaaaa tcatgttaat ttatttttat tactttcatg
     3541 ataaaaatac aagcaattga actttattac ggaaaatcaa acttttcaat gagactatta
     3601 atttggctag tcgcgaagat gcatttttct aaaatgtgac aaaaacataa gcaatgtttt
     3661 ctatatctaa cactaatatt taacttatta tcatcaacac acctgctata catcattgcg
     3721 cactaaaaag gcagtagctt cattttaagc tactgccttt tgtaacgtat tctctttcaa
     3781 ctcgctactt cgcatacgca ctacgaatga ctaaaagttc attcatttga tatgctgttt
     3841 catttttaat cattatttga ctgtcataat tagcttacct ggatcagcat cttgtacatc
     3901 ttcaatgaca agttctttat tttcaagatt tgtaataatc attggtgtaa cgatgcttgg
     3961 tgcgtgtgct ttcaagtatg ctaaattcac tttcattaat ggttgacctt gtgttacttt
     4021 ttcatcaacg ttaatcagac tttcgaatcc ttcaccattc agtttcactg tatcgatacc
     4081 aatatgaata agtacttcga cgccactttc agattctaat cctatcgcat gtttcgtagg
     4141 gaagattgtt ttcactgtac catcaaacgg tgctacaatt tcaccttttt cagggataaa
     4201 gccaacacca tcacccatca ttttaccagc gaatacttga tcaggtactt ctgataatgg
     4261 aatgatttga ccgatacctg gtgcatagat gtctgttgtt ccaagtgctt ctacgtgaac
     4321 tggttcatct gacatttctt cagtcactgt cgtttcactt ggtttcgtaa tttcaccact
     4381 cataatcttg gccatatcat gtttaatttg atctgatttt ggaccaaaga tagcttgcat
     4441 attgtttcca acttctaata cacctgatgc gcctaaagct ttaatacctg ctacatctac
     4501 ttttgattta tcaaccactt ctacgcgtag acgtgtaata catgcatcta aatgtttaat
     4561 gttttctttt ccacccattg catctaagac atcaaatggt aattttgcga cactagagtt
     4621 acgaatttca gtttcttcat cttcacgacc tggtgttttc aatttaaact tacgaattgc
     4681 aaagtcgaat aagaagtaat acacgatagc atatacaata ccgactggaa taactaataa
     4741 tgcgtgtgaa cgatcccagt ttaataaacc atataaaata taatctatga aaccacctga
     4801 gaatgtcata ccaattttaa cgcctaataa atgcattact aagaatgatg taccagctaa
     4861 taatacgtga attccataaa gtactggtgc tacaaataag aatgaaaatt ctaatggctc
     4921 agtgatacca gttaaaaatg cagttaatcc tgctgataac attaaaccac ccacgacttt
     4981 tttacgttct ggtcgtgcat ttttataaat agcaaatgcc gccgctggta aaccaaacat
     5041 cataaatgga tatttaccag tagtaaatgc accagcagta aatggtacgc catctttcaa
     5101 ttgtgccatc caaatacgtt ggtcaccacg aaccaattca cctgcgtgat ttgtataact
     5161 tccgaattca aaccagaacg gtgaatagaa aatatgatgt aaaccaaatg gaattaatga
     5221 gcgttcaata ataccgaata taaacgttgt taatgttaaa tttttattta ataagaaatt
     5281 cgataaacta tttaatccat cttgaattgg tggccacgca aagcttaaaa gcacacctgt
     5341 tgcgattgct acgaccgatg tcacaatcgg tacaaatcgt ttacctgcaa agaatcctaa
     5401 aaatggtggt agtgtaatat tataaaattt gttgtaacac catgcggcta aagcacccat
     5461 gataatacca ccaaacacac ccgtttgtaa cgttggaata cctaatacta aagcatgtgc
     5521 tggttctttc gctgcttgac ttaattcttt tgcccctttg gcatatgaga aaatgtcatc
     5581 aattgtaatg tgcaacactt tccccattgt tgcattcata attaagtaac ctactagcgc
     5641 tgctaatgct gcaacaccgt ctcctcctgc taatccaagt gctgtaccaa ctgcaaataa
     5701 taatggcaag ttatcaaata caacttgtcc tgctgcttcc atgaccgacg aaatcattac
     5761 aatgatatcg ttttttaacc atggtgcaat ttctactaat tgttcgttgt gcattgcgtt
     5821 accaaacgct aataaaatac cagctgctgg taaaatcgca acaggtaaca ttaatgcttt
     5881 accgatacgt tgcaattgtc caaacaattt cttaaacata taaacatccc ctatctcaat
     5941 ttccgcttcc atgtacaaaa aaagcaggca tgaacaaaca agactattct catagtgcgg
     6001 ttgtttgctc atgcctgcat taccagtaac acgcaagtga tatctaattc atagctatta
     6061 tacatatttg taaaagcgtt ttcaacaact ttttcacaat tttatcatca attcagtacg
     6121 atcatttgtg ataaataaac aaaacggcaa ttcccatttt gttgaaatag aaattaccgt
     6181 ttttatagtt caattcaatt gtgataacct ttaaatcagt tataagaaac gttttgctgc
     6241 cactgaaatt ggtggaattt gatctaaatc taaatgttta tcttcagtaa ttgatctaaa
     6301 tgcccactta ccataaccaa gcgcttcttc atttacaatt ttacctggta atggcgcagc
     6361 attaggatca acatatacat ctacaatcgt tggtacatct tgtgctaatg cctcttcgac
     6421 tatagcatct acttcgctag cactcttaat tgtataacct ttaccacctg ctgcctcagc
     6481 aaattttgca tgatccatat cagaaaaatc aactgcatat tctaattcac cagctgcttg
     6541 ttgttcatat ttaataaatg ctaactgttt gttattaagt acaaatacag ttaaaggtaa
     6601 atcatattgt actgctgtag cgaagtcttg cattaccatt tggaatgcac cgtcaccagc
     6661 aattgcgatg gcttgtctat ttggatatgc aatttttgat gcaattgcac ctggaagacc
     6721 gcaacccatt gtacctaacc aacttgaaat gatgaacttg ttatttacac caaggtttaa
     6781 gtatcgagtt gaccaaactg ttgctgtacc tacatctgct gaaatcactg catcatcttt
     6841 aataaattta ttgattgatg ccattaatcg ttctggacgt aatggtttac tattattatt
     6901 tttatcttgt tccatccatt tatcccaaac cgctttacgt tctaacgttt tgtttaagaa
     6961 tggtctttca gcaacatgtt taatattttc agttaactga tgcaacgcaa ttttactatc
     7021 tccaacaatt cctacattaa tattgaaacg atgtccgata tttttaggat ttgtgtcaat
     7081 ttgaatggct ttaatatttt tcttaggtaa gtaatccaca tatggatagt ttgtaccaac
     7141 cataattaat aaatccgctt cctgcattgt ttgataagat gttttggtac cgattttacc
     7201 taagttaccg atactatatg gatgatcatc cggcaagatt gttttagctg gtaatgaatg
     7261 aatgacagga attttagcca tttcaataaa ttcacgtagc tcatctttcg catgtttcgc
     7321 acctacacca attaacatga caggcttttt acttttatta attagtttaa ccgctttttt
     7381 gatgtcttta tattttggtg atactactgt tggtcttgat gtatctactg gtttattcgt
     7441 tgtatcttta attttttcag ttaataagtc gttaggacaa ataacaacag ctacaccttt
     7501 ttgttcatat gccgtacgaa ttgcttcgtt aacgatttca aacacattgt cacctttttc
     7561 aatttggtga ttataaacgg ctacatcttc acataatttt tgtaaatttg tttcttggaa
     7621 tgctttcgtt ccaagtgctg tactattcgt ttgtccagat aatattaatt gcggtacatt
     7681 atccattttg gcatcataca taccatttaa taaatgaatt aaaccagggc caccgatact
     7741 taatgccaca ccgattttac cagttaattt tgtgtaacca gcagccgcta agcttgctac
     7801 ttcttcatga cgtacatgat aaaatttaaa ttgatctctc actgtacgta aactatcgac
     7861 tactgcgtcg attgagtctc ctggaatacc atacaagtga tctatatccc atgcttgtaa
     7921 tgctttaact aatgcttcat ttgcttttat ttttgccatt attactaata gcctcccttt
     7981 ctgtctatca ttttaaatat ctaaattaat agaataataa aattagaaca ggtattaaca
     8041 ctgaactaat aactgcagtt aaaatcatcc caattgaact aaatgcaccg gattcaatat
     8101 ccatttctag tgctttagct gtgccaaatg catgtgacgc attcccatac gttaatcctt
     8161 tggcgataga agattcaaat cttccaaatc ttaataacat cgaacctaaa atactaccga
     8221 ttaaacccgt tgtgataata aaaagtacgg tcatcgtatc tgtaccacct agttcatgtg
     8281 acacttcgat acctactgcg gctgttatag atcggggcaa taacgttaca atgacgtctt
     8341 tagaatagcc aaatgcttta agtgttaaga acactaacat gaaattcagc atgacgccag
     8401 ttaatacact tgcaaaaatg atagagacat tgtctttaat tttctctcta tttttataaa
     8461 gtgggtacgc taaacatacg accgttgcgt ttaaaatatg gttgatccaa ctgccacctt
     8521 tcatataccc gttataacta attccaaaga taagtaagac aaaaataatt cctaaagatg
     8581 caattaatgc tggattcaaa aatgggttcg gatatttttg ttgtaacctt ttagcgaaat
     8641 aatataaaac gacagtcaac aaaatcatta ataaggcttg cacgtaatca ttcataagcg
     8701 tctacacctt tacgatgttt atgtttaaca gacatttttt cagcaatata acctgaagat
     8761 aatgcaacga tacatgttcc tatgataatg actgcgaaaa agagtatata atttagcgta
     8821 atttcggaag caacatccat aatacctaca actgacggta tgaagaaaaa gaccatcgtc
     8881 tttaataaaa agtttgcacc gtcttctacc caagttagcg gtacaatctt aaattgtaat
     8941 agtaaataaa ataaaaatag accaacaata ctgccggcta agggaagatg aaaaatcttt
     9001 tgaatttctg tgccaatata agtaatcaca atgatgattc ctagttgtag tagtagtttg
     9061 attattaatt ggactttgtg catggcgcca tccctttcta aatatgtcta aattgttaca
     9121 ataactatta taaagatggc gtacacaata taaaaatact ctttttttat agtttgtatt
     9181 actattttct atggaaacgc tctctaaatt tcacttcatt ttcacaaaaa aacactcatt
     9241 atttcaatga cccacgtaat gatgcgcctt aaataatgag tgctttatta atatgttagc
     9301 ctaaacggtc tttcaaaaat tctatccatt tcgttgtggc atgacttaat tgtttatcct
     9361 tcttccaaac aacacctaat tcccaatgta catgagcatc ttcaatgcgt agcagcttca
     9421 catctccatt tagttgctct gaaattgatg ttggtaaaat actaatacct aattcattcg
     9481 taactaaatc ttctataaca tgccattgtg aaatttgcgc tacagtattc ggaacaaagc
     9541 caacgttttt agcattttca ataattttat cattcaagta aaagtcttta ttaaataaaa
     9601 tgaagtcttc acctgctaaa tcttcgagtt taacagtttc atattttgcg agtcgatgct
     9661 ctctgctcac gataagtcgc aaatcttcct tatctagggt agtataatcg aaaatatgat
     9721 gatcgactgg caaagtggtc acgcctatat ctacttcatc attgataatt tgctgttcaa
     9781 ttgttttacc gccattttct atcaaattat atgtaacatt tggatattgt tgatggaatg
     9841 caccaagaat attgataaga atcttcatat tcatgactgc cgacatgccc atgtttatat
     9901 gtcctgtttc cagtccattc aagcgttcca tttcagatgg taaataatca tacagtgcaa
     9961 caatttcttt acttttctca taaaaaattt gacctgcatc ggtaagaatt aaatgtcttt
    10021 tacttctatc aaataagggc gtgcccattt cattttcaat atctttaatt gctttactaa
    10081 ttgtaggttg tgcaatatat aatgatttgg aagcattagt catgcctcct tgcttaacga
    10141 cttcaataaa atatttcata tgtttgatat ccactaacat catcctaact atttcaacac
    10201 gtttatttca ttatacacaa cttcttaaac attcaataaa tttagattta taaaattgct
    10261 ttataaaaag ttttatgtaa aatacacatt cttttatggt attatattaa tggctcaagt
    10321 atattaatcg aggtgaggta ttgagctttt acgaatttat gcaaagtttt cttggtgatg
    10381 acacaccatt aggtgaattg gttgattgga ttaatcaaga tagcaatttc cctagagaag
    10441 tgaagagcca tagtgaaata ttgtcatatt ttcgaacaaa tccatgtcct gaaagcatct
    10501 cagtacctgt aattaaacgg gcactatcag ttttcaacca attcacaaat gtacaatgat
    10561 acatgaatac atggagtcac atcatctcat gttagcgctc tgattgcagg gcgctatttt
    10621 taatgttatt gctacattta gtatattgtg attgctattt tctttcagtt atagaaccac
    10681 gtaccttttc ttttaaatca ttttatattt tcccactaat atccgctgtt aatcaatcct
    10741 gacatccttg tatcactatg acaattaatt gttaaataca tgaatttcta cattttatga
    10801 aaaaatccat ttttattaca attcaacact ttatatgaca acttcattac agttactttt
    10861 attgttgatt gcttacattg ttttctaaaa aaaatttgtt atcataatta acgttgaata
    10921 aagaaaaaaa ttaacttggg agataaaaat ggaatataaa aagatactaa ttcgtttatt
    10981 aattgctttt gcagtacttt tctcagcaga tttcacttat caatccgtcg aacaaacgca
    11041 tcaatcgcat gccgcagtta attattatag taaaaaccaa tgtacatggt gggcatttaa
    11101 acgtcgcgca caagtcggta aacctgtttc taatagatgg ggcaatgcta aaaattggta
    11161 ttacaatgca cgtaaatcaa aatatgcgac tggtcgtaca ccaagaaaat ttgctgtcat
    11221 gcaatcaact gcaggatatt atggacatgt cgcagttgtt gaacaagtat ataaaaacgg
    11281 tagtattaaa gtttcagaat acaactttta tcgcccatta aaatacaata cacgtgtact
    11341 aagcaaaaag gcagcacgta actttaacta
//
LOCUS       DALPQQ010000084        11088 bp    DNA     linear   BCT 22-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus strain K18-6-464
            SAMD00233528-rid16434743.denovo.084, whole genome shotgun sequence.
ACCESSION   DALPQQ010000084 DALPQQ010000000
VERSION     DALPQQ010000084.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMD00233528
            Sequence Read Archive: DRR236061
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 11088)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11088)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001543423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001543423.1
            Genome Coverage       :: 77x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/22/2022 17:09:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,811
            CDSs (total)                      :: 2,743
            Genes (coding)                    :: 2,689
            CDSs (with protein)               :: 2,689
            Genes (RNA)                       :: 68
            rRNAs                             :: 2, 4, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 4, 2 (16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 54
            CDSs (without protein)            :: 54
            Pseudo Genes (ambiguous residues) :: 0 of 54
            Pseudo Genes (frameshifted)       :: 27 of 54
            Pseudo Genes (incomplete)         :: 27 of 54
            Pseudo Genes (internal stop)      :: 10 of 54
            Pseudo Genes (multiple problems)  :: 10 of 54
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11088
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMD00233528-rid16434743.denovo.084"
                     /strain="K18-6-464"
                     /db_xref="taxon:1280"
                     /geo_loc_name="Japan: Niigata"
     gene            complement(<1..676)
                     /locus_tag="O7798_001826"
     CDS             complement(<1..676)
                     /locus_tag="O7798_001826"
                     /EC_number="6.3.4.15"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499991.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="biotin--[acetyl-CoA-carboxylase] ligase"
                     /protein_id="HDC2864084.1"
                     /translation="MSKYSQDVLQLLYKNKPNYISGQSIAESLNISRTAVKKVIDQLK
                     LEGCKIDSVNHKGHLLQQLPDIWYQGIIDQYTKSSALFDFSEVYDSIDSTQLAAKKSL
                     VGNQSSFFILSDEQTKGRGRFNRHWSSSKGQGLWMSVVLRPNVAFSMISKFNLFIALG
                     IRDAIQHFSQDEVKVKWPNDIYIDNGKVCGFLTEMVANNDGIEAIICGIGINLTQQLE
                     NFDESIR"
     gene            complement(663..1865)
                     /locus_tag="O7798_001827"
     CDS             complement(663..1865)
                     /locus_tag="O7798_001827"
                     /EC_number="2.7.7.72"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499992.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CCA tRNA nucleotidyltransferase"
                     /protein_id="HDC2864085.1"
                     /translation="MDKSLFEQARPILEQIQDNGFEAYYVGGSVRDYVMGRNIHDIDI
                     TTSATPDEIESIFSHTIPVGKEHGTINVVFNDENYEVTTFRAEEDYVDHRRPSGVTFV
                     RDLYEDLQRRDFTMNAIAMDTAYKLYDYFDGQQDINNRIIRTVGIAEERFQEDALRMI
                     RCLRFQSQLSFDIATETFEAMRIQMADIKFLSIERIVIELTKLMRGINVEKSFNHLKS
                     LKAFNYMPYFEHLDMNQINVTEAIDLELLIAIVSVKFDINYSLKPLKLSNRQVKDINQ
                     YIQIMNALPSIITKEQLKMFVYDYDTHLIKNVMVAADVLKANDIQGHEPLIVNLQTID
                     ETLHRLPMHNRKDMMVNGGVLMAHLNAKSGPWLKDVLRQIEIAIVTGKVSNEETEILK
                     WVDNHVKI"
     gene            complement(1870..3012)
                     /gene="bshA"
                     /locus_tag="O7798_001828"
     CDS             complement(1870..3012)
                     /gene="bshA"
                     /locus_tag="O7798_001828"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499993.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetyl-alpha-D-glucosaminyl L-malate synthase
                     BshA"
                     /protein_id="HDC2864086.1"
                     /translation="MKIGITCYPSMGGSGIIATELGIKLAERGHEVHFITSNIPFRIR
                     KPLPNMIFHQVEVNQYAVFQYPPYDITLSTKIAEVIKEYDLDLLHMHYAVPHAICGIL
                     AREMSGKDIKIMTTLHGTDITVLGYDHSLQGAIKFGIEKSDIVTSVSKSLAQETHEII
                     ETNKEIIPIYNFVRENEFPTKHNTALKSQFGIAPDEKVLIHVSNFRQVKRIDTIIETF
                     AKVREKIPSKLILLGDGPELVPMRQLTKELNVEEDVLFLGKQDCVSEFYQLSDLVLLL
                     SEKESFGLTLLEAMKTGVVPIGSNAGGIKEVIKHGETGFVVDVGDCDSASDYAIRLLE
                     DKVLYNKLQKNMLADIAERFGSELITDQYEYYYQKMLNEHNKSKGE"
     gene            complement(3253..3570)
                     /locus_tag="O7798_001829"
     CDS             complement(3253..3570)
                     /locus_tag="O7798_001829"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499994.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleotide pyrophosphohydrolase"
                     /protein_id="HDC2864087.1"
                     /translation="MKSMVEMQREVDEYIGQFKTGYFSPLANLARLTEEVGELAREIN
                     HTYGEKKKKDSEEANTIKAELGDNLFVLLCLANSMGIDMTESFNETMEKFNTRDKNRF
                     ERK"
     gene            complement(3907..4587)
                     /locus_tag="O7798_001830"
     CDS             complement(3907..4587)
                     /locus_tag="O7798_001830"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002456509.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc metallopeptidase"
                     /protein_id="HDC2864088.1"
                     /translation="MIIYFVILMVLPLWAQHKVKSNYEKYSQVRSTSGKTGREVALEI
                     LHANGIYDVEVVKGEGFLTDHYDPKKKVVSLSPANYDRPSVAGTAIAAHEVGHAIQDH
                     QGYWFLRFRAALVPVANLGSSLSYMIIMLGIILTAIGSAFGSTALWIGAGLMSLAVLF
                     SIVTLPVEFDASSRAMKQITALNIVNEKEYKHARKVLSAAAMTYVAATAVAVAELVRI
                     ILIARSSD"
     gene            complement(4659..5246)
                     /locus_tag="O7798_001831"
     CDS             complement(4659..5246)
                     /locus_tag="O7798_001831"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499996.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1405 domain-containing protein"
                     /protein_id="HDC2864089.1"
                     /translation="MTIKAFWQYTLYQRSWLMMLLICNILGMIYGYIWYGEQLSHTPW
                     HFKIFVPDSPTAILYLVISISLILIQKQNSIIDALAFVTLFKYGIWAVIMNILFIIEQ
                     GDITVNGLVLMFSHSIMAVQAIYFYPRFKRSMIGISVAMIWVFLNDYIDYFHLQFPYY
                     DFITTHVWQIGVLSCCLSVFGLLLYIELNKLLKCK"
     gene            complement(5236..5811)
                     /locus_tag="O7798_001832"
     CDS             complement(5236..5811)
                     /locus_tag="O7798_001832"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499997.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YpiB family protein"
                     /protein_id="HDC2864090.1"
                     /translation="MSETLNQIKESFIEYLLFQYRFKSRIAVWVLNYIKVNEAKLANI
                     HFVDTKINHHETLEIAEVGSHASAIQFTKRNIKLMNTNEIFDYIANHNCAFDIQIHFA
                     NVSKREQRLDDLIVAQLTESPSYQTYLHDLNSMAIDRHKHALLIDYLLHNIDLSLQMN
                     EKQRFYQLTQILNTLKLVNKHNQFEDLADDN"
     gene            complement(5825..7069)
                     /locus_tag="O7798_001833"
     CDS             complement(5825..7069)
                     /locus_tag="O7798_001833"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000389522.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDC2864091.1"
                     /translation="MEDIYKLIDDINLQKLENLDSRVNEAITTDNDDALFILGETLYN
                     FGLMPQGLEVFRVLYHKYPDESELLIYFIEGLMSENQTDEALEYLSYVEPSPEKLMLE
                     ADLYQQINMMEVAIDKLQEALELEPNDPIIHFALAEMLYYDGQYLRATSEYETVLETG
                     EYQVNGVNLFSRMADCSLQSGNYSDAIRLYDEINEDEMTSEDYLKKAISYDKNDITQE
                     AIKIMTTLLSKDPDYIQGYLYLQSLYENEKNYPDAIETGKEGLRLSQFYKELMYTTGC
                     LEIEHGDANEGVLLLKQALEVDNAYQEPLLILSDLYRNEEDYEAIIELLTYVDEEDLD
                     PTFMWHLAFAYGQEERDKEAQHFFELAYPTMKTNIDFMSDYYFYLIEIGQKEQAITIL
                     NQLLELEPSNENWHDELSRLQS"
     gene            complement(7076..8374)
                     /gene="aroA"
                     /locus_tag="O7798_001834"
     CDS             complement(7076..8374)
                     /gene="aroA"
                     /locus_tag="O7798_001834"
                     /EC_number="2.5.1.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499999.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-phosphoshikimate 1-carboxyvinyltransferase"
                     /protein_id="HDC2864092.1"
                     /translation="MVNEQIIDISGPLKGEIEVPGDKSMTHRAIMLASLAEGVSTIYK
                     PLLGEDCRRTMDIFRLLGVEIKEDDEKLVVTSPGYQSFNTPHQVLYTGNSGTTTRLLA
                     GLLSGLGIESVLSGDVSIGKRPMDRVLRPLKLMDANIEGIEDNYTPLIIKPSVIKGIN
                     YQMEVASAQVKSAILFASLFSKEPTIIKELDVSRNHTETMFKHFNIPIEAEGLSINTT
                     PEAIRYIKPADFHVPGDISSAAFFIVAALITPGSDVTIHNVGINPTRSGIIDIVEKMG
                     GNIQLFNQTTGAEPTASIRIQYTPMLQPITIEGELVPKAIDELPVIALLCTQAVGTST
                     IKDAEELKVKETNRIDTTADMLNLLGFELQPTNDGLIIHPSEFKTNATVDSLTDHRIG
                     MMLAVASLLSSEPVKIKQFDAVNVSFPGFLPKLKLLENEG"
     gene            complement(8384..9448)
                     /locus_tag="O7798_001835"
     CDS             complement(8384..9448)
                     /locus_tag="O7798_001835"
                     /EC_number="4.2.3.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500000.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-dehydroquinate synthase"
                     /protein_id="HDC2864093.1"
                     /translation="MKLQTTYPSNNYPIYVEHGAIDHISTYIDQFDQSFILIDEHVNQ
                     YFADKFDDILSYENVHKVIIPAGEKTKTFEQYQETLEYILSHHVTRNTAIIAVGGGAT
                     GDFAGFIAATLLRGVHFIQVPTTILAHDSSVGGKVGINSKQGKNLIGAFYRPTAVIYD
                     LDFLKTLPFEQILSGYAEVYKHALLNGESATQDIEQHFKDREILQSLNGMDKYIAKGI
                     ETKLDIVIADEKEQGVRKFLNLGHTFGHAVEYYHKIPHGHAVMVGIIYQFIVANALFD
                     SKHDINHYIQYLIQLGYPLDMITDLDFETLYQYMLSDKKNDKQGVQMVLIRQFGDIVV
                     QHVDQLTLQHACEQLKTYFK"
     gene            complement(9474..10640)
                     /gene="aroC"
                     /locus_tag="O7798_001836"
     CDS             complement(9474..10640)
                     /gene="aroC"
                     /locus_tag="O7798_001836"
                     /EC_number="4.2.3.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500001.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chorismate synthase"
                     /protein_id="HDC2864094.1"
                     /translation="MRYLTSGESHGPQLTVIVEGVPANIEIKVEDINKEMFKRQGGYG
                     RGRRMQIEKDTVEIVSGVRNGYTLGSPITMVVTNDDFTHWRKIMGAAPISEEERENMK
                     RTITKPRPGHADLVGGMKYNHRDLRNVLERSSARETAARVAVGALCKVLLQQLDIDIY
                     SRVVEIGGIKDKDFYDSETFKANLDRNDVRVIDDSIAQAMRDKIDEAKNEGDSIGGVV
                     QVVVENMPVGVGSYVHYDRKLDGKIAQGVVSINAFKGVSFGEGFKAAEKPGSEIQDEI
                     LYNSEIGYYRGSNHLGGLEGGMSNGMPIIVNGVMKPIPTLYKPLNSVDINTKEDFKAT
                     IERSDSCAVPAASIVCEHVVAFEIAKALLEEFQSNHIEQLKQQIIERRQLNIEF"
BASE COUNT         3548 a         2076 c         1477 g         3987 t
ORIGIN      
        1 gtctaatact ttcatcaaag ttttctagtt gttgcgtcaa attaatacct ataccacata
       61 ttattgcttc tataccatca ttattagcaa ccatttcagt taagaaacca cacactttac
      121 cattatcaat atatatatca ttcggccatt tcactttgac ttcatcttga ctaaaatgtt
      181 gaatcgcatc tcttatccct aatgcaataa ataaattaaa tttagatatc attgagaatg
      241 caacgttagg tcttaacacg acagacatcc aaagtccttg cccttttgaa gaactccaat
      301 gtctattaaa tcgcccacga cctttcgttt gttcatcact caagataaaa aatgaagatt
      361 gatttccaac aagtgacttt ttcgcagcaa gttgtgtaga atctattgaa tcgtatactt
      421 cactaaaatc aaacaaagca gaactttttg tatattggtc tattatacct tgataccaaa
      481 tatctgggag ctgttgtaat aaatgccctt tatgatttac tgaatctatt ttacatccct
      541 ctaactttaa ttggtcaatc acttttttta ctgcagtgcg tgaaatatta agtgattccg
      601 caatgctttg tccagatata taattcggtt tatttttata gagtaattga agtacatctt
      661 gactatattt tgacatgatt atccacccat ttcaaaattt cagtttcttc gttgcttact
      721 ttacctgtta caatcgctat ctcaatttgt cttagcacat cttttaacca cggaccactt
      781 ttggcattta aatgtgccat aagtacaccg ccattaacca tcatgtcttt tctattatgc
      841 ataggtaaac gatgtaatgt ttcatcaatc gtttgaaggt taacgattaa tggttcatgt
      901 ccttgaatat catttgcctt taacacgtct gctgcaacca ttacattttt aatgagatgc
      961 gtatcataat cataaacaaa catttttaat tgttcttttg taataatact tggtaatgca
     1021 ttcataattt gaatatattg attgatatct tttacttgtc ggttacttag ctttaaaggc
     1081 ttcaatgagt aattaatatc aaatttaact gatactatag caatcaacaa ttctaaatca
     1141 attgcttcag ttacattaat ttgattcata tcaagatgtt cgaaatacgg catataatta
     1201 aatgctttca gcgattttaa atgattaaaa ctcttttcaa cattaatacc tcgcattaat
     1261 ttagttagtt caatcactat acgctcaatt gataaaaatt taatatctgc catttgtata
     1321 cgcatcgctt cgaatgtttc cgttgcaata tcaaatgata attgtgactg gaaccttaaa
     1381 catcgaatca tacgtaaagc atcttcttgg aatcgttcct cagctatacc tacagttctt
     1441 attattcgat tattaatatc ttgttgacca tcaaaataat catacaattt gtatgctgta
     1501 tccattgcta tcgcattcat cgtgaaatct cgtcgttgca aatcttcgta taaatcacga
     1561 acaaatgtaa caccacttgg tctacggtga tcgacataat cttcttcagc ccggaatgtt
     1621 gtcacttcat aattttcatc attaaaaact acatttatcg tgccatgttc tttacctaca
     1681 ggtatcgtat gactaaagat agattctatt tcatccggcg ttgcacttgt tgtgatatct
     1741 atatcatgaa tatttcttcc catgacataa tctcttacag agccacctac ataatatgct
     1801 tcaaaaccat tgtcttgaat ttgttctaat ataggccttg cctgttcaaa taatgattta
     1861 tccatattat tactcgcctt tacttttgtt atgctcattt agcatttttt gataataata
     1921 ctcatattga tctgtaataa gttctgatcc aaaacgttca gcaatatctg ctagcatgtt
     1981 tttctgaagt ttgttgtata acaccttatc ttcaagtaat cggatagcat agtcactcgc
     2041 tgaatcacaa tcacccacat ctacgacaaa tccagtttca ccatgtttaa taacctcttt
     2101 aattccaccg gcatttgaac caattggaac gacgcctgtt ttcatagcct caagtaaagt
     2161 tagtccaaag ctttcttttt cacttaataa taatactaag tcagataatt ggtaaaattc
     2221 acttacgcaa tcttgtttcc ctaaaaataa aacatcctct tctacgttta actctttcgt
     2281 caattgacgc attggcacta attcaggacc atctccaagt aaaattaatt tactaggtat
     2341 cttttcacgt acttttgcaa atgtttctat aatagtatct atgcgtttta cttgtctaaa
     2401 attcgataca tgtattaaca ctttttcatc tggtgctata ccaaattgtg attttaatgc
     2461 tgtgttatgt ttagttggaa actcattttc acgtacaaaa ttataaatcg gtataatttc
     2521 tttgttagtt tcaataattt catgtgtttc ttgtgctaaa gatttactca cacttgtcac
     2581 aatatcactt ttttcaatgc caaatttaat tgcaccttgg agtgaatgat catagcccaa
     2641 aacagtaata tcagtaccgt gtagcgttgt cataattttt atatctttac ctgacatctc
     2701 acgagctaaa atcccacaaa ttgcatgagg tacagcatag tgcatatgca acaaatcaag
     2761 atcatattct ttaataactt cagcgatttt agtacttaac gtaatatcat acggtggata
     2821 ctgaaatact gcatattgat tcacttcaac ttgatgaaaa atcatattcg gtaatggttt
     2881 tcttattcta aacgggatat ttgaagtgat aaaatgtact tcgtgacctc gctctgctaa
     2941 tttaattcct aattctgtgg caataattcc agaaccaccc atggacgggt aacatgttat
     3001 acctatcttc attcgcttgc ccatcctttc tttctatttc tctctattat tctcgatgcg
     3061 tagataattg tttaaattta agtttatagt aatgttgagt ttataatttc atatatctaa
     3121 aaacaggtgt tgtatatata atcattcatc tagttatact tactttaaaa ataatataat
     3181 ttcatgcgat gcaattcatt gatggatgtt tttaatctta atcaaatcca aataaagcat
     3241 atatttttaa attcactttc tttcgaatcg atttttatct cttgtattaa acttttccat
     3301 tgtttcatta aagctctctg tcatatctat tcccattgaa ttcgctaaac ataacaacac
     3361 aaataaatta tcacctaatt ctgctttaat cgtatttgct tcctctgaat ctttcttctt
     3421 tttttcacca taggtatgat ttatttcacg tgcaagttcg cccacttctt cagtcaatct
     3481 agctaagtta gctaatggtg aaaaatatcc tgttttaaat tgtccaatat attcatcaac
     3541 ttcacgttgc atttctacca ttgatttcat ttctacgttc tccttatatt gcatttctaa
     3601 tatagtatat atcaatttga agtctcatgc atgtttagtg caatctactg actctagcta
     3661 aactagatga caagttgttt attttagaag tttaataatt cagtttatat aaatgtaatg
     3721 cattcctaac taaattaaat caattgaaat tgggattata actttatgat acgtaccact
     3781 acaataaaat aatatagtga ataatctacc attagaaaaa taagcacaaa aaaactagca
     3841 accacacaaa aatgtgatta gctagttaat aagtgtctaa tttaagttaa ttgttaatct
     3901 ataagattaa tcacttgaac gcgcaatcaa aataatacgt acaagctctg ctacagcgac
     3961 tgcagttgct gcaacataag tcattgctgc tgcagataat actttacgcg catgcttgta
     4021 ttctttttca tttacaatgt tcaatgccgt aatttgtttc atcgctcttg aactcgcatc
     4081 aaactcaact ggtaacgtaa caattgagaa taataccgct aatgacatta aaccagcacc
     4141 aatccataaa gcagttgaac caaatgcact acctatcgct gttaagataa tacctaacat
     4201 gatgatcata taacttaatg aactccctag gtttgcaaca ggtactaatg ctgctctgaa
     4261 tcttaagaac caatatcctt ggtgatcttg aatggcatga ccaacttcgt gggctgcaat
     4321 tgcagttcca gcaactgatg gtctgtcata gtttgcagga gatagtgaaa caactttctt
     4381 tttaggatcg taatgatctg ttaagaatcc ttcaccttta acaacttcga catcataaat
     4441 accgtttgca tgtaaaattt ctaatgcaac ttcacgaccc gttttaccac tagttgatct
     4501 aacttgtgaa tatttctcat agttagattt aactttgtgt tgtgcccata aaggaagcac
     4561 cattaatatt acgaaataaa ttatcatagt aaaaattgaa gacaataaac tcactctcct
     4621 ttataaatat tttactgtca tttgccgttt ttatcaaatc atttacactt taataatttg
     4681 tttaattcaa tataaagcaa aagtccaaaa acacttagac aacatgataa tacaccaatt
     4741 tgccacacat gtgtagttat aaaatcataa tatggaaatt gaaggtgaaa atagtcaata
     4801 taatcattca aaaacaccca aatcatcgct acactgattc caatcataga acgtttaaac
     4861 ctaggataga agtaaattgc ctgaacagcc attatactgt gggaaaacat taataccaaa
     4921 ccatttactg taatatcacc ttgttcaata ataaataata tattcattat aactgcccaa
     4981 atcccatatt tgaataatgt tacaaatgcc agtgcatcga taatactatt ttgtttttga
     5041 attaatatca atgagataga aataactaag tataatattg cagttgggct atctggaaca
     5101 aaaatcttaa aatgccaggg cgtatgactt aattgttcac cataccatat ataaccataa
     5161 atcatcccta atatattaca aatgagtagc atcattaacc aagaacgttg ataaagtgta
     5221 tattgccaaa atgctttaat tgtcatctgc taagtcctca aattgattat gtttatttac
     5281 tagcttgagt gtatttaaaa tttgcgttag ttgataaaaa cgttgctttt cattcatctg
     5341 taaacttaaa tcaatattgt gtaacaagta atctattaat aacgcatgtt tatgccgatc
     5401 tatagccata ctatttaagt catgaagata agtttgataa ctgggcgatt ccgttagttg
     5461 agcaactatt aaatcatcta gcctttgctc acgctttgac acgtttgcga agtgaatttg
     5521 aatatcaaaa gcacagttat gattagcgat ataatcaaat atttcatttg tattcattaa
     5581 ctttatatta cgcttagtaa attgaattgc agaagcgtga cttcccactt ctgcaatttc
     5641 taatgtttca tgatgattaa tttttgtatc tacaaaatga atgtttgcca atttcgcctc
     5701 attcactttt atatagttaa gcacccaaac tgcaatacgc gacttaaatc gatattgaaa
     5761 aagtaaatat tcaataaaac tttctttaat ttgattgagt gtctctgaca tcaaataccc
     5821 cattttaaga ttgcaatctt gataattcgt catgccaatt ttcgttactt ggctctagtt
     5881 ccaacaattg atttaaaata gtaattgctt gttccttttg accaatttca attaaataga
     5941 aataataatc actcataaaa tcaatatttg ttttcatcgt tggatatgct aattcaaaga
     6001 aatgttgagc ttctttatct cgctcttctt gaccataggc gaacgctaaa tgccacatga
     6061 atgtaggatc caaatcttct tcatctacat atgttaataa ttcaatgatt gcttcataat
     6121 cttcttcatt acgatataaa tcgcttaaaa tcaataaagg ttcttggtaa gcattatcaa
     6181 cctctaatgc ttgttttaac aataatacac cttcattagc atcgccgtgt tctatttcca
     6241 aacatccagt tgtatacatt aactctttat aaaattgact tagtcgtaat ccttctttac
     6301 ccgtttcaat ggcatctgga taattttttt cattttcata taatgattgt aaatacaagt
     6361 agccttgaat ataatcagga tctttagaaa gtaatgtagt cattatttta attgcttctt
     6421 gagtgatgtc atttttatcg taagaaatgg cttttttgag ataatcttct gaagtcattt
     6481 catcttcatt aatttcatcg tataagcgaa tcgcatcact atagttacca ctttgtaaac
     6541 tacaatctgc catacgagag aataagttta caccattaac ttgatattca ccagtttcta
     6601 aaacggtttc gtattcagag gtagcacgta aatattgacc atcataatat aacatttcag
     6661 ccaatgcaaa atggattatt ggatcatttg gctctagttc aagtgcttct tgtaatttat
     6721 caatagcaac ttccatcata ttaatttgtt gatataaatc tgcttctaac atcaactttt
     6781 caggtgatgg ttcaacataa cttaaatatt ctaacgcttc gtcagtttga ttttcagaca
     6841 ttaaaccttc aataaaataa atcagcaatt cactttcgtc tggatatttg tgatataaca
     6901 cgcggaatac ttccaaacct tgtggcatta atccaaaatt gtaaagtgtc tctcctagaa
     6961 taaataatgc gtcatcgttg tcagtagtta ttgcttcatt aacacgagag tctaaatttt
     7021 ctagtttttg tagattgata tcgtctatta atttatagat atcttccatt ttatattatc
     7081 cctcattttc taaaagcttt agttttggta aaaatcctgg aaatgataca tttacagcat
     7141 caaattgttt gattttgaca ggctcgcttg aaagtagaga agcaactgca agcatcattc
     7201 ctattcgatg atcagttaaa ctatcaactg ttgcatttgt tttaaattct gacggatgaa
     7261 taatcaatcc atcattagtt ggttgtaatt caaaccctaa caagtttaac atatcagccg
     7321 ttgtatcaat tctatttgtt tcttttactt ttaattcctc ggcatcttta attgtactcg
     7381 tgccaactgc ttgtgtacaa agtaatgcta ttacaggcag ttcatcaatt gcttttggaa
     7441 ctaattctcc ttcgattgtt attggttgaa gcattggtgt gtattgaata cgaatagaag
     7501 cagtaggttc agcaccagtt gtttgattga aaagttggat attaccgccc attttttcaa
     7561 caatatcaat aatacctgaa cgtgttggat tgattccaac attatgaatt gttacatcac
     7621 ttcctggtgt gataagtgct gcaacaataa agaacgctgc agatgaaata tcgccaggaa
     7681 catgaaaatc tgcaggttta atgtatcgaa ttgcttcagg ggttgtatta attgataacc
     7741 cttctgcttc aattggaata ttaaaatgtt tgaacatcgt ctcagtatga tttcgactta
     7801 catctaattc tttaatgatg gtcggttcct tagaaaacaa acttgcaaat aaaatggcac
     7861 tttttacttg tgcacttgca acttccattt gataatttat accttttatg acagatggct
     7921 taataattaa tggtgtataa ttatcttcaa taccttcaat attcgcatcc ataagtttca
     7981 atggtctcaa gacacgatcc attggccttt taccaattga aacatcgcca gacaaaacac
     8041 tttcaatacc taaaccactt aacaaacctg ccaataatcg tgttgtcgta ccagaattac
     8101 ctgtatacaa tacttgatgt ggcgtgttaa aagattgata tcctggggaa gtcacaacta
     8161 atttttcatc atcttctttg atttctacac ctaacagtcg gaaaatgtcc atcgtacgac
     8221 gacaatcttc gccaagtagt ggcttatata tagtagatac accttcagct agcgacgcca
     8281 acatgattgc acggtgtgtc attgacttat cgcccggcac ttctatttcg ccctttaacg
     8341 gacctgaaat atcaatgatt tgttcattta ccatttcatt cacctactta aaatatgttt
     8401 ttaattgttc acatgcatgt tgtaatgtta gttgatcaac atgttgtaca acgatatctc
     8461 caaattgtct aatcaagacc atttgtacac cttgcttatc attcttttta tcacttagca
     8521 tatattggta taacgtttca aaatccaagt cagttatcat gtctaaagga tagccgagtt
     8581 gtattaaata ttgaatataa tgattaatat catgcttaga atcaaacaaa gcattcgcaa
     8641 ctataaattg atagataatg ccaaccatca ctgcatgacc atgaggtatt ttatgatagt
     8701 attcaacagc atgaccaaat gtatgaccta aatttaaaaa tttacgtaca ccttgttctt
     8761 tttcatctgc aataacaata tccagcttcg tttcaatacc tttagcaata tatttatcca
     8821 taccatttaa tgactgtaat atctctctat ctttaaagtg ctgttcgata tcttgcgtcg
     8881 ctgattcacc attcaataac gcatgcttat aaacttctgc atagccactt aatatttgct
     8941 caaatggtaa cgtctttaaa aagtctaaat cataaatcac agcagttgga cgataaaatg
     9001 caccgataag gtttttacct tgctttgagt taatacccac tttaccgcca acactagaat
     9061 catgcgctag tatagtcgtt ggcacttgta taaagtgaac gcctcgtaaa agtgtcgccg
     9121 caataaaccc agcaaaatca ccagttgcac caccaccaac agcaataatt gctgtattac
     9181 gagttacatg atgggataaa atatactcta atgtttcttg atattgctca aatgttttcg
     9241 tcttttcacc agctggaata ataactttat gtacattttc atatgataaa atatcatcaa
     9301 atttatcagc aaaatattga tttacatgct cgtcaattaa tataaaactt tgatcaaact
     9361 gatcaatata cgtgctaata tggtcaattg caccgtgttc aacatatatt ggataattat
     9421 ttgaagggta tgttgtttgt aatttcatga ttacacctca attgttcttg ttgttaaaac
     9481 tcaatattta attgtctgcg ctcaataatt tgttgtttaa gttgctcaat atgatttgat
     9541 tggaattctt ccaataatgc ttttgctatt tcaaatgcta cgacatgttc gcagacgata
     9601 cttgctgcag gaacagcaca actatcagaa cgttcaattg ttgctttaaa gtcttcttta
     9661 gtattaatgt ctactgaatt taatggttta tataacgttg gaattggttt cattacacca
     9721 ttaacgataa ttggcattcc atttgacata ccgccttcta aaccacctaa gtgattagat
     9781 ccacgataat aaccaatttc actattatat agaatttcat cttgaatctc actacctggc
     9841 ttttcagctg ctttaaatcc ttcaccaaag cttacacctt taaaagcatt tatgctgaca
     9901 acaccttgtg caatcttacc atctaactta cgatcataat gcacataact acctacacca
     9961 acaggcatat tttcaactac aacttgaacg acaccgccaa ttgaatctcc ttcattttta
    10021 gcttcgtcaa ttttatctcg cattgcttgt gcgatactgt catcaattac acgaacatca
    10081 ttacgatcaa gatttgcttt aaatgtttct gaatcataaa aatctttatc tttaattcca
    10141 cctatttcaa caacacgact gtatatatcg atatctaact gttgtaataa cactttacat
    10201 aaggcaccga ctgcaactcg agctgctgtt tctctagcag atgatcgctc tagcacattt
    10261 cgtaaatcac gatgattata tttcatacct ccaaccaaat ctgcatgacc aggtcttggt
    10321 tttgtaatag tacgtttcat attttcacgt tcttcttcac ttattggagc tgctcccata
    10381 atttttctcc aatgcgtaaa gtcatcattg gttacaacca tagtaattgg actacctaat
    10441 gtataaccat ttctaacgcc tgatactatt tctactgtat ctttctcaat ttgcatacga
    10501 cgtccacgtc cgtaaccgcc ttgacgctta aacatttctt tattaatatc ctcaacctta
    10561 atttctatat ttgcaggtac accttcaaca ataactgtta attgaggtcc atgtgattct
    10621 cctgatgtta ggtatctcat acacactcgc tcctttcata cttccacgat aacattataa
    10681 tatgttgtta atcttatcat attcattgtg cattcataaa tgtttgtttt caagctcaat
    10741 taagaaaatg gatgacatct cattttaaat gtcagaatta tcttaatatt aaacgaacta
    10801 aaattaatta taatatattc gtctgtagaa aagtatcatg aatttctaaa cagttgcatc
    10861 atataatcat taattaaaaa tgattagccg ttttaatata atcgtatcgc aactttagca
    10921 aataatatac tgactacatt tcttaataca aaagaacgaa ctgttaatta ttaataaagt
    10981 taatcagtcc gtttaaaaaa attatgatat taaaatatac atatgttaag cgcttttgtt
    11041 atactttgac ttcaaaaata taatcaattc ttttactaat acataaaa
//
LOCUS       DALPQQ010000085        11046 bp    DNA     linear   BCT 22-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus strain K18-6-464
            SAMD00233528-rid16434743.denovo.085, whole genome shotgun sequence.
ACCESSION   DALPQQ010000085 DALPQQ010000000
VERSION     DALPQQ010000085.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMD00233528
            Sequence Read Archive: DRR236061
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 11046)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11046)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001543423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001543423.1
            Genome Coverage       :: 77x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/22/2022 17:09:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,811
            CDSs (total)                      :: 2,743
            Genes (coding)                    :: 2,689
            CDSs (with protein)               :: 2,689
            Genes (RNA)                       :: 68
            rRNAs                             :: 2, 4, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 4, 2 (16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 54
            CDSs (without protein)            :: 54
            Pseudo Genes (ambiguous residues) :: 0 of 54
            Pseudo Genes (frameshifted)       :: 27 of 54
            Pseudo Genes (incomplete)         :: 27 of 54
            Pseudo Genes (internal stop)      :: 10 of 54
            Pseudo Genes (multiple problems)  :: 10 of 54
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11046
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMD00233528-rid16434743.denovo.085"
                     /strain="K18-6-464"
                     /db_xref="taxon:1280"
                     /geo_loc_name="Japan: Niigata"
     gene            95..1033
                     /locus_tag="O7798_001837"
     CDS             95..1033
                     /locus_tag="O7798_001837"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020444682.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1672 domain-containing protein"
                     /protein_id="HDC2864095.1"
                     /translation="MFKKAKLILIATLLLSGCSAMNNESKKDTNTETNTETKSVPEEM
                     EASKYVGQGFQPPAEKDAIEFVKKHRKEFEKVGEQFFKDNFGLKVKATNVVGKDDGVE
                     VYVHCEDHGIVFNASLPLYKDAIHQKGSMRSNDNGDDMSMMVGTVLSGFEYRAQKEKY
                     DNLYKFLKENEKQYQYTGFTKEAINKTQNVGYQNEYFYITYLSRNLKEYRKYYEPLIH
                     KNDKEFKEGMQRARKELNYTANTNTVATLFSTNDERNRKEKINNVIDLSEKIERTKDM
                     PIKNTITTQLGNKLIGTKKARFDDKKVVSFGAFEDE"
     gene            1026..1232
                     /locus_tag="O7798_001838"
     CDS             1026..1232
                     /locus_tag="O7798_001838"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDC2864096.1"
                     /translation="MNKINDRDLTELSSYRVYQDINKDNDFTVNEKRFKQADVFEDLY
                     REKLKDTNKLREYNYLQNETFKSA"
     gene            1247..2161
                     /locus_tag="O7798_001839"
     CDS             1247..2161
                     /locus_tag="O7798_001839"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500025.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1672 domain-containing protein"
                     /protein_id="HDC2864097.1"
                     /translation="MLKKAKFILMATILLSGCSTTNNESNKETKSVPEEMDASKYVGQ
                     GFQPPAEKDAIEFAKKHKDKIAKRGEQFFMDNFGLKVKATNVIGSGDGVEVFVHCDDH
                     DIVFNASIPFDKSIIDSDSSLRSKDKGDDMSTLVGAVLSGFEYRAQKEKYDKLYKFFK
                     DNEEKYQYTGFTKEAINKTQNSGYENEYFYISAIPYNLAEYRDYFEPLLNKSDSEFSK
                     ELSNVKKQLKDKSKVSVTTTLFSKKKNYTKKSNSENVIKMAEEIKKDKEIPNGIELSI
                     KFSDNKINTVKPNFNGESTSEYGVFDQE"
     gene            2360..2479
                     /locus_tag="O7798_001840"
     CDS             2360..2479
                     /locus_tag="O7798_001840"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500024.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDC2864098.1"
                     /translation="MTIFTQLSDRIKKAISKINQANNIPNNARKSPMYHSPIT"
     regulatory      2562..2696
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00050"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="FMN riboswitch; Derived by automated computational
                     analysis using gene prediction method: cmsearch."
                     /bound_moiety="flavin mononucleotide"
                     /db_xref="RFAM:RF00050"
     gene            2758..3303
                     /locus_tag="O7798_001841"
     CDS             2758..3303
                     /locus_tag="O7798_001841"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500023.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ECF transporter S component"
                     /protein_id="HDC2864099.1"
                     /translation="MQQNKRLITISMLSAIAFVLTFIKFPIPFLPPYLTLDFSDVPSL
                     LATFTFGPVAGIVVALVKNLLNYLFSMGDPVGPFANFLAGASFLLTAYAIYKNKRSTK
                     SLITGLIIATIVMTIVLSILNYFVLLPLYGMIFNLADIANNLKVIIVSGIIPFNIIKG
                     IVISIVFILLYRRLANFLKRI"
     gene            complement(3409..3657)
                     /locus_tag="O7798_001842"
     CDS             complement(3409..3657)
                     /locus_tag="O7798_001842"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002449743.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ferredoxin"
                     /protein_id="HDC2864100.1"
                     /translation="MAKYTIVDMDTCIACGACGAAAPDIYDYDDEGIAFVILDDNQGT
                     AEVPEELYEDMEDAIDGCPTDSIKIADESFDGDALKFE"
     gene            3765..4718
                     /locus_tag="O7798_001843"
     CDS             3765..4718
                     /locus_tag="O7798_001843"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500021.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HDC2864101.1"
                     /translation="MQHIIKTALQQTFNYKTNKSIYNILVGKKSHQTFFDACSQQQLS
                     LYHSLPLLKYPSFELFLEKINEFNAEMEIMLHPRYTFESMGQTFQAIQLLVQTMSNTK
                     QHVFHFVPISQNNKIQETVKIVYNYIKENQLQIDFENELHNLFKAITLKGPCYLHYYL
                     QGYDEPMYTRQQVSLIEKLSQQQLFEYEMNNLVTMMFELESGEYTILSKIIMKPTLLN
                     QTYITYTKLLEQFTMEDIAAQQQVKINTIEDHVLEILIKGYMSNYDDYVELEDQLQFL
                     NFYQQHRGERLKFYKEQFDTLSYFQLKVLIVGFERGDLNVA"
     gene            4708..6087
                     /locus_tag="O7798_001844"
     CDS             4708..6087
                     /locus_tag="O7798_001844"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500020.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent DNA helicase RecQ"
                     /protein_id="HDC2864102.1"
                     /translation="MLHDILRNKFGFESFKPGQQEIIESIMSQQHTLGILPTGSGKSL
                     CYQIPTYLSGKPTLIISPLISLMDDQVMQLKINGEKRVTCIHSGMDEIEKKHNIKCLR
                     HSRFIFLSPEFLLQPSNFKLISMIDFGMIVLDEAHCLSEWGYDFRPHYALIGKVTKHF
                     KEAVVLALTATAPPHLQDDLTEMLAIQFNVIKTTMNRPNISFKHLNFHDDEDKIEWLL
                     PFLQQSGPTIIYVSSKKMCLNLAQLIYDSGFLTGIYHGDMNYQERHTVQQQFLNNDIP
                     IIVATSAFGMGINKKDIRTIIHFHLSTSPSNYIQEIGRAGRDGELSQAISLFQPDDKY
                     ILETLLFADMITEEDVQNFEIGEFLAPDKQAVLTTLQSFYSIGALKQIFKQSFKRKQL
                     GFFRMIGYCKLDQCRRKYLLEFFGEYPPAQDRCCDNDSNITDIAILNKKKVIRSIGFD
                     EKLQNLFLR"
     gene            6240..7700
                     /gene="ebpS"
                     /locus_tag="O7798_001845"
     CDS             6240..7700
                     /gene="ebpS"
                     /locus_tag="O7798_001845"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500019.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="elastin-binding protein EbpS"
                     /protein_id="HDC2864103.1"
                     /translation="MSNNFKDDFEKNRQSIDTNSHQDHTEDVEKDQSELEHQDTIENT
                     EQQFPPRNAQRRKRRRDLATNHNKQVHNESQTSEDNVQNEAGTIDDRQVESSHSTESQ
                     EPSHQDSTPQHEEEYYNKNAFAMDKSHPEPIEDNDKHDTIKNAENNTEHSTVSDKSEA
                     EQSQQPKPYFTTGANQSETSKNEHDNDSVKQDQDEPKEHHNGKKAAAIGAGTAGVAGA
                     AGAMAASKAKKHSNDAQNKSNSGKANNSTEDKASQDKSKDHHNGKKGAAIGAGTAGLA
                     GGAASKSASAASKPHASNNASQNHDEHDNHDRDKERKKGGMAKVLLPLIAAVLIIGAL
                     AIFGGMALNNHNNGTKENKIANTNKNNADESKDKDTSKDASKDKSKSTDSDKSKEDQD
                     KATKDESDNDQNNANQANNQAQNNQNQQQANQNQQQQQQRQGGGQRHTVNGQENLYRI
                     AIQYYGSGSPENVEKIRRANGLSGNNIRNGQQIVIP"
     gene            7825..7941
                     /locus_tag="O7798_001846"
     CDS             7825..7941
                     /locus_tag="O7798_001846"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500018.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDC2864104.1"
                     /translation="MLFNKVLSRILAYQFNFLNSHQKDKTPQSTNLTRKNKK"
     gene            8102..9088
                     /locus_tag="O7798_001847"
     CDS             8102..9088
                     /locus_tag="O7798_001847"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500017.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YpdA family putative bacillithiol disulfide
                     reductase"
                     /protein_id="HDC2864105.1"
                     /translation="MQKVESIIIGGGPCGLSAAIEQKRKGIDTLIIEKGNVVESIYNY
                     PTHQTFFSSSDKLSIGDVPFIVEESKPRRNQALVYYREVVKHHQLKVNAFEEVLTVKK
                     MNNKFTITTTKDVYECRFLTIATGYYGQHNTLEVEGADLPKVFHYFKEAHPYFDQDVV
                     IIGGKNSAIDAALELEKAGANVTVLYRGGDYSPSIKPWILPNFTALVNHEKIDMEFNA
                     NVTQITEDTVTYEVNGESKTIHNDYVFAMIGYHPDYEFLKSVGIQINTNEFGTAPMYN
                     KETYETNIENCYIAGVIAAGNDANTIFIENGKFHGGIIAQSMLAKKQTPLES"
     gene            complement(9203..10171)
                     /locus_tag="O7798_001848"
     CDS             complement(9203..10171)
                     /locus_tag="O7798_001848"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500016.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="asparaginase"
                     /protein_id="HDC2864106.1"
                     /translation="MKHLLVIHTGGTISMSQDQSNKVVTNDINPISMHQDVINQYAQI
                     DELNPFNVPSPHMTIQHVKQLKDIILEAVTNKYYDGFVITHGTDTLEETAFLLDLILG
                     IEQPVVITGAMRSSNEIGSDGLYNYISAIRVASDEKARHKGVMVVFNDEIHTARNVTK
                     THTSNTNTFQSPNHGPLGVLTKDRVQFHHMPYRQQALENVNDKLNVPLVKAYMGMPGD
                     IFSFYSREGIDGMVIEALGQGNIPPSALEGIQQLVSLNIPIVLVSRSFNGIVSPTYAY
                     DGGGYQLAQQGFIFSNGLNGPKARLKLLVALSNNLDKAEIKSYFEL"
     gene            10248..10907
                     /locus_tag="O7798_001849"
     CDS             10248..10907
                     /locus_tag="O7798_001849"
                     /EC_number="2.7.4.25"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500015.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="(d)CMP kinase"
                     /protein_id="HDC2864107.1"
                     /translation="MKAINIALDGPAAAGKSTIAKRVASELSMIYVDTGAMYRALTYK
                     YLKLNKTEDFAKLVDQTTLDLTYKADKGQCVILDNEDVTDFLRNNDVTQHVSYVASKE
                     PVRSFAVKKQKELAAEKGIVMDGRDIGTVVLPDADLKVYMIASVEERAERRYKDNQLR
                     GIESNFEDLKRDIEARDQYDMNREISPLRKADDAVTLDTTGKSIEEVTDEILAMVSQI
                     K"
     gene            10938..>11046
                     /locus_tag="O7798_001850"
     CDS             10938..>11046
                     /locus_tag="O7798_001850"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500014.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDC2864108.1"
                     /translation="MQRLTHIQNECADNDLLKLKGDFYSMMNESCLFIFG"
BASE COUNT         4222 a         1633 c         1913 g         3278 t
ORIGIN      
        1 atccaataga atatggagtg tatcgtaaag atgaataaat ttttttaaaa tgctttttaa
       61 tattctatat aaacacataa atgggtgatg agctatgttt aaaaaggcga aattaatctt
      121 aatagcaacg ctactgttat caggatgttc agcgatgaat aatgaatcaa aaaaagacac
      181 aaatacagaa acaaatacag aaacaaaatc agtaccagaa gaaatggaag cttcaaaata
      241 tgtaggacaa ggctttcaac cacctgcaga aaaagatgcg attgaatttg tgaagaagca
      301 tcgtaaagaa tttgaaaaag taggtgaaca attctttaaa gataactttg gactaaaagt
      361 taaagctaca aatgttgtag gtaaagatga tggtgtagaa gtttatgtgc attgcgaaga
      421 tcatggcatt gtatttaatg caagtctacc tttgtacaaa gatgccatcc atcaaaaagg
      481 atcaatgcgt agtaatgaca acggtgatga tatgagtatg atggtgggta cagtgctgag
      541 tggctttgaa tatcgagcgc aaaaagaaaa gtatgataat ttatataaat ttttaaaaga
      601 aaatgaaaag caatatcaat atacaggttt tactaaagaa gcaattaaca agacgcaaaa
      661 cgtcgggtat caaaatgaat atttttatat tacatattta tcaagaaatt taaaagaata
      721 tagaaaatat tacgaaccat tgatacataa aaatgataaa gagtttaaag aaggtatgca
      781 acgagctaga aaagagctaa actatactgc taatacaaat actgtagcaa cgttgtttag
      841 tacgaatgat gaaaggaata gaaaagaaaa gataaataat gtaatagatt tatccgagaa
      901 aattgaaaga acaaaagata tgccaatcaa gaatactata actactcaat taggaaataa
      961 acttattggc acaaaaaaag ctcgttttga tgataagaaa gtagtgtcgt ttggagcatt
     1021 tgaagatgaa taaaataaat gatagagatt taacagaatt gagtagctat agggtttatc
     1081 aagacatcaa taaagataat gactttacag ttaacgaaaa acgatttaag caggcagatg
     1141 tatttgaaga tttatataga gagaaactaa aagacacaaa taaattaaga gagtataatt
     1201 atttacaaaa tgaaactttt aaaagcgcat aaataggtga tgagatatgc ttaaaaaagc
     1261 aaaatttatc ttaatggcaa cgatactact atcaggatgt tcaactacca ataacgaatc
     1321 caacaaagaa acaaaatctg taccagaaga aatggatgct tcaaaatatg taggacaagg
     1381 attccaacca cctgcagaaa aagatgcgat tgaatttgca aagaagcata aagataaaat
     1441 tgctaagcga ggcgaacaat tttttatgga taacttcggt ctaaaagtta aagctacaaa
     1501 tgttataggt agtggcgatg gtgtagaagt attcgtgcat tgtgatgacc acgacatcgt
     1561 atttaatgcg agtattccat ttgataaatc aattattgac agtgatagct cattaagaag
     1621 taaggataaa ggtgatgata tgagtacttt agttggtgca gtactcagtg ggtttgaata
     1681 tcgagcacaa aaagaaaaat atgataaatt atataaattt ttcaaagata atgaagagaa
     1741 atatcaatat acaggattta caaaagaagc aattaataag acgcaaaata gtggttatga
     1801 aaatgaatat ttttatattt cggccatacc ttataattta gctgagtata gagactattt
     1861 tgaaccattg ttaaacaaaa gtgacagtga attttcaaaa gaattgtcaa atgttaagaa
     1921 gcaattaaaa gataagtcta aagtttcggt aactactact ctatttagta aaaaaaagaa
     1981 ctatactaaa aaaagtaaca gtgaaaatgt aataaaaatg gcagaagaaa taaaaaaaga
     2041 taaagagata ccaaacggta tagagcttag tataaaattt tcggacaata aaataaatac
     2101 ggttaaacca aattttaacg gtgaaagcac ttcagaatat ggtgtgtttg atcaagaata
     2161 aaattaatga tgaaaattta acggagaata gtgtatattg agtagatcaa gaataaaaag
     2221 ataattctac tattgttgtg aaggcaaata agtagaagat tttaagtgta atttctggtg
     2281 atttaaataa taatataaat ggaagtactg atataaaact ttttaaccta ctagattctt
     2341 ataatttgct ttccatttta tgacgatttt tacccaattg agtgatagaa tcaaaaaagc
     2401 catctcaaaa attaatcaag caaacaacat tccaaacaat gctcgcaaat caccaatgta
     2461 tcactctcca attacgtaac tatgatttaa tttaagcata gttattgagg ttttgtgata
     2521 tatagtataa aattaatgag aattaaattt aataatgtaa aattcatctt cggggtcggg
     2581 tgtaattccc aaccggcagt aaataaagcc tgcgacctgc tagtatgtat catattagtg
     2641 gctgatctag tgagattcta gagccgacag tatagtctgg atgggagaag atggaggttt
     2701 tttgttgtgc aataatcctc ctattcttac gagatgaatg gaaggagaaa attgaatatg
     2761 caacaaaata aacgtcttat cacaataagt atgttgagcg cgattgcgtt tgtgttaact
     2821 tttatcaagt ttcctatacc atttttgcca ccatacttaa ctttagattt tagtgatgta
     2881 ccgtcactac tagctacatt tacgtttgga ccagttgccg gtatcgtagt tgcactggtt
     2941 aaaaatttat tgaactactt atttagtatg ggcgatccag ttggaccatt tgctaacttt
     3001 ttagcaggcg caagtttctt attaactgct tacgccatct ataaaaataa acgttcaaca
     3061 aaatctttga ttactggatt aatcattgca acaatcgtta tgactatcgt gttgagtatt
     3121 ttgaactatt tcgttctatt acctttgtac ggtatgatat ttaacttagc tgatatcgca
     3181 aataatctta aagtaatcat tgtttcagga attataccat tcaatattat taaaggtatc
     3241 gttatttcta ttgtatttat tttactatat agaaggcttg cgaatttctt gaaaagaatt
     3301 taatcaaatt aaagcaaaat aatatacaca taataataaa aagcaggtga ctatcaataa
     3361 acgatagctt gcctgctttt tctatagaac atttgtctaa aaaatcaatt attcaaattt
     3421 taaagcgtcc ccatcaaatg attcgtctgc aattttaata gaatctgtag ggcatccatc
     3481 aattgcatct tccatatctt catataattc ctcaggtact tctgcagtac cttggttatc
     3541 gtcaaggatt acgaaagcaa taccttcgtc gtcgtaatca tatatatctg gcgctgctgc
     3601 accgcatgca ccacatgcaa tacaagtatc catatcaacg attgtatatt ttgccaatgt
     3661 cttcgcctcc tttgataaaa atgctaaaat agtaatgtga ctaaaatttt agacagcatc
     3721 atttttattt tcaaattatc cgttttacag agtgagggtt aaatttgcaa cacattataa
     3781 aaacagcatt acaacaaaca tttaactata aaacaaataa aagtatttac aatatcttag
     3841 ttggtaagaa atctcaccaa accttttttg acgcttgtag tcaacaacag ttgtcattat
     3901 atcacagttt accactatta aaatatccgt cttttgagct atttttagaa aaaatcaatg
     3961 aatttaatgc tgaaatggaa atcatgttgc atcctagata tacatttgaa agcatggggc
     4021 aaacatttca agcaattcaa ctattagtgc aaaccatgtc taataccaaa caacatgttt
     4081 ttcattttgt accaatctct caaaataata agatacaaga aactgtaaag attgtctata
     4141 actacattaa agaaaaccaa ttacaaattg attttgaaaa tgaactacat aacttgttta
     4201 aagcaataac tttaaaaggg ccatgttact tacattatta tttgcaaggc tatgatgaac
     4261 caatgtatac gagacagcaa gttagtttaa tagaaaagct atctcaacag caattgtttg
     4321 aatacgaaat gaataattta gtgacaatga tgtttgaatt agaaagtgga gaatatacta
     4381 ttttatcaaa aataataatg aaacctacat tattaaatca aacttatatt acttatacaa
     4441 aattgcttga acaattcacg atggaagata tagcggctca acaacaagtt aaaatcaata
     4501 ctatcgaaga tcatgtactt gaaatcttaa tcaaaggtta catgtctaat tacgatgatt
     4561 atgttgaact agaagatcaa ctccagtttt tgaattttta tcaacagcat cgtggcgaac
     4621 gattaaaatt ttacaaagaa caatttgaca cgttatcata ttttcaatta aaagtattaa
     4681 tcgttggatt tgaaagaggt gatctgaatg ttgcatgata ttttacgaaa caaatttgga
     4741 ttcgagagtt ttaaaccggg acaacaggaa attatagaaa gtataatgtc tcaacaacac
     4801 actctaggta tacttccaac tggaagtgga aagagtttgt gttatcaaat acctacgtat
     4861 ttatcaggta agccgacatt aattatctca ccgttaatat ctttaatgga tgaccaagtt
     4921 atgcagttga aaataaatgg agaaaaacgt gtaacatgta ttcactctgg tatggatgaa
     4981 attgagaaaa agcataatat taaatgttta cgacatagcc gcttcatctt tctaagtcca
     5041 gaatttctcc tgcaaccgtc aaattttaaa ttaatatcta tgatagactt tggcatgatt
     5101 gttctagatg aagcacattg cctatctgaa tggggatatg atttcagacc acattatgct
     5161 ctaataggaa aagtaacaaa gcattttaaa gaagcggttg tcttagcatt gacagcaact
     5221 gcaccaccgc atttacaaga tgatttgacg gaaatgttag cgattcaatt caatgttatt
     5281 aaaactacaa tgaatcgccc aaatataagc tttaagcatc ttaattttca tgatgatgaa
     5341 gataaaattg aatggttgct gccgtttcta caacagtcgg gaccaacgat tatttatgtc
     5401 tcatcgaaaa agatgtgtct gaatttagcg caacttattt atgattcagg ttttcttaca
     5461 ggtatttatc atggtgatat gaattatcaa gagcgacaca cagttcaaca acaattttta
     5521 aataatgata ttccgattat agtcgcaacg agtgcttttg gtatgggaat taataaaaaa
     5581 gatattcgca caatcattca ctttcatctt tcaacaagtc cttctaacta cattcaagaa
     5641 attggccgtg cgggtcgcga tggtgaacta agtcaggcaa ttagtttatt ccaaccggac
     5701 gataaatata ttttagaaac gttattattt gcagatatga taacagaaga agatgtacaa
     5761 aatttcgaaa taggagaatt tttagctccc gataaacaag ccgttttgac aacgttgcaa
     5821 tcattctata gtatcggcgc cttgaaacag atatttaagc aatcatttaa acgaaagcaa
     5881 ttaggattct ttcgcatgat tggctattgc aaattggatc aatgtagacg gaagtattta
     5941 ttagaatttt tcggtgaata tccaccggca caagatcgat gttgtgacaa tgattctaat
     6001 ataactgata tcgcaatttt aaataagaag aaggtaatta gaagtattgg atttgatgaa
     6061 aagttgcaaa atttatttct cagatagtat tactttacta aaagaaaatt gacaagctat
     6121 aattagtgta tacacaattg aaaaatgatt gaaataattt tgaaaaatat acataaacat
     6181 atgtcatgtg ggtatatttt atgtaaaatc attgtaatag aatagaaagg aagatggcta
     6241 tgtctaataa ttttaaagat gactttgaaa aaaatcgtca atcgatagac acaaattcac
     6301 atcaagacca tacggaagat gttgaaaaag accaatcaga attagaacat caggatacaa
     6361 tagagaatac ggagcaacag tttccgccaa gaaatgccca aagaagaaaa agacgccgtg
     6421 atttagcaac gaatcataat aaacaagttc acaatgaatc acaaacatct gaagacaatg
     6481 ttcaaaatga ggctggcaca atagatgatc gtcaagtcga atcatcacac agtactgaaa
     6541 gtcaagaacc tagccatcaa gacagtacac ctcaacatga agaggaatat tataataaga
     6601 atgcttttgc aatggataaa tcacatccag aaccaatcga agacaatgat aaacacgata
     6661 ctattaaaaa tgcagaaaat aacactgagc attcaacagt ttctgataag agtgaagctg
     6721 aacaatctca gcaacctaaa ccatatttta caacaggtgc taaccaatca gaaacatcaa
     6781 aaaatgaaca tgataatgat tctgtaaaac aagatcaaga tgaacctaaa gaacatcata
     6841 atggtaaaaa agcagcagct attggtgctg gaacagcagg tgttgcaggt gcagctggtg
     6901 caatggctgc ttctaaagct aagaaacatt caaatgacgc tcaaaacaaa agtaattctg
     6961 gcaaggcgaa taactcgact gaggataaag cgtctcaaga taagtctaaa gatcatcata
     7021 atggcaaaaa aggtgcagcg atcggtgctg gaacagcagg tttggctgga ggcgcagcaa
     7081 gtaaaagtgc ttctgccgct tcaaaaccac atgcctctaa taatgcaagc caaaaccatg
     7141 atgaacatga caatcatgac agagataaag aacgtaaaaa aggtggcatg gccaaagtat
     7201 tgttaccatt aattgcagct gtactaatta tcggtgcatt agcgatattt ggaggcatgg
     7261 cattaaacaa tcataataat ggtacaaaag aaaataaaat cgcgaataca aataaaaata
     7321 atgctgatga aagtaaagac aaagacacat ctaaagacgc ttctaaagat aaatcaaaat
     7381 ctacagacag tgataaatca aaagaggatc aagacaaagc gactaaagat gaatctgata
     7441 atgatcaaaa caacgctaat caagcgaaca atcaagcaca aaataatcaa aatcaacaac
     7501 aagctaatca aaatcaacaa cagcaacaac aacgtcaagg tggtggccaa agacatacag
     7561 tgaatggtca agaaaactta taccgtatcg caattcaata ctacggttca ggttcaccgg
     7621 aaaatgttga aaaaattaga cgtgccaatg gtttaagtgg taacaatatt agaaacggtc
     7681 aacaaatcgt tattccataa tataactata taaattgtaa ctgaactgct atatacaaac
     7741 gtgcatatta taagtatctc taaatatttt ggagaactta aattgcgctt ataagtatgt
     7801 agcggttttt tcatttttca aagtttgtta tttaacaagg tcttgtctcg aatattggca
     7861 tatcaattta actttttaaa tagtcatcaa aaagataaaa caccacaatc aacaaattta
     7921 acgaggaaga ataaaaaata aatcaacata ttaaattgta gtgttattca actccgtagc
     7981 taacaattct ctatgcacat taaacaaatt gtcaaaaata tatcataaat cttcaagcac
     8041 agacttagcg catcaatcac tgaactgtta taatagtttg ggattaaagg aggccgaaac
     8101 aatgcaaaaa gttgaaagta tcataattgg tggagggcca tgcggattaa gtgcggctat
     8161 tgaacaaaaa agaaaaggta ttgatacctt aattattgaa aagggtaatg tcgttgaatc
     8221 aatctacaat tatcctactc accaaacatt tttctcatca agtgataaat taagtattgg
     8281 ggacgtaccg tttatcgttg aagaaagtaa accaagacgt aatcaagcgc tagtttatta
     8341 ccgagaagtt gtaaaacatc atcaattaaa agtaaatgca tttgaagaag tattaactgt
     8401 taaaaaaatg aataataaat ttactattac tacgacgaaa gatgtttatg aatgtcgatt
     8461 tttaacaatc gcgacaggct attatggtca gcataataca ttagaagttg aaggtgcgga
     8521 tttacctaaa gtgttccatt attttaaaga ggcacatccg tattttgatc aagatgttgt
     8581 aattatcggt ggtaagaatt cggctatcga tgctgctttg gagttggaaa aagctggtgc
     8641 taacgtgacg gttctatatc gtggtggaga ttattcgcct tcaattaaac cgtggatact
     8701 tccaaatttc acagcattag taaatcatga aaaaattgac atggaattta atgctaatgt
     8761 tacccaaata actgaagata ctgtgactta tgaagtaaat ggtgaaagta aaacgataca
     8821 caatgattat gtatttgcga tgattggtta tcatcccgat tatgaatttt taaaatctgt
     8881 aggcattcaa attaatacaa atgaatttgg aacagcgcct atgtataata aagaaacata
     8941 cgaaacaaat atcgaaaatt gctatattgc aggtgtaatt gctgcaggga acgatgcgaa
     9001 taccattttt attgaaaatg gtaaattcca cgggggcatt attgctcaaa gcatgctagc
     9061 taagaaacaa acgcccttag aatcataaaa ataaaggtct atgtactaaa taacttagtt
     9121 ttacaacgac tgacattcat gatatgtcaa atgaggttga tgactaatga ttgtacatag
     9181 acctttttat gttacgtatt cattataatt caaaatatga tttgatttca gctttatcta
     9241 aattgttgct taacgcgact aataatttta atcttgcttt tggaccattc aagccgttag
     9301 aaaaaataaa accttgttgt gcgagttggt aaccaccacc atcgtatgcg taagttggac
     9361 tcacaatacc attaaaggaa cgtgaaacta gcacaatagg tatatttaaa gatactaatt
     9421 gttgaatgcc ttctaatgcg cttggaggta tgttgccttg tcctaacgct tcaataacca
     9481 taccatcgat accttctcga ctataaaaac taaaaatgtc acctggcata cccatatatg
     9541 cttttactaa tggtacattt agtttgtcat tgacattttc caatgcttgt tggcgatatg
     9601 gcatatgatg gaattgcaca cgatcctttg tcaatacacc tagcggacca tgatttggac
     9661 tttgaaatgt gtttgtatta gacgtatgtg ttttggtaac attacgcgcc gtatgaattt
     9721 catcattaaa tacaaccatc acgcctttat gacgggcctt ttcatcagag gcaacgcgaa
     9781 tagcggaaat ataattatat aatccgtcag aaccaatttc attagacgag cgcattgcgc
     9841 cagtaataac aacaggttgc tcgataccta atattaaatc aagtaaaaag gcagtttctt
     9901 ctaacgtatc ggtaccatgc gtgataacga aaccatcata atatttattt gttactgctt
     9961 ctaaaataat atcctttaat tgtttaacat gttggattgt catatgaggt gatggtacat
    10021 taaaaggatt taattcatct atttgtgcat attgatttat gacatcttga tgcattgaaa
    10081 tagggttgat atcatttgtt actactttat tagattggtc ttgtgacata ctaatggtgc
    10141 caccagtatg aataacaagt agatgtttca tatatttcct cctatattta atttacctaa
    10201 ttatgataaa atattattca taaaacgaca aggaagggaa atgacgcatg aaagccatta
    10261 atattgcatt agatggtcca gctgctgccg gaaaaagtac aattgcgaaa cgtgtagcca
    10321 gcgaactatc aatgatttat gtcgatacag gagcaatgta tcgtgcatta acatacaaat
    10381 atttaaaatt aaacaaaact gaggactttg caaaactagt tgaccaaaca acattagatt
    10441 taacttataa agcagataaa ggtcaatgtg tcattttaga taacgaagat gtaacagact
    10501 ttttaagaaa taatgatgtg acgcaacatg tttcatacgt tgcatctaaa gagccagtac
    10561 gttcattcgc cgttaaaaaa caaaaagagt tagctgcaga aaaaggtatc gtaatggatg
    10621 gtcgcgatat cggaactgta gtgctaccag atgcagattt aaaagtatat atgattgcat
    10681 cagttgaaga gcgagcagaa agaagatata aagataatca attaagaggt atcgaatcaa
    10741 attttgaaga tttaaaacgt gatattgaag ctcgtgatca atatgacatg aaccgtgaaa
    10801 tatcaccatt aagaaaagca gatgatgcag tgacattaga tacgacaggc aagtcgattg
    10861 aagaagttac tgacgaaatt ttagcgatgg tgagtcaaat taaataatct aataagtcat
    10921 aactatctat ttgtaatgtg caacgcttaa cgcatataca aaatgaatgt gctgataatg
    10981 atttactcaa attaaaaggt gatttttatt caatgatgaa tgaaagttgc ctttttattt
    11041 ttggta
//
LOCUS       DALPQQ010000086        11038 bp    DNA     linear   BCT 22-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus strain K18-6-464
            SAMD00233528-rid16434743.denovo.086, whole genome shotgun sequence.
ACCESSION   DALPQQ010000086 DALPQQ010000000
VERSION     DALPQQ010000086.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMD00233528
            Sequence Read Archive: DRR236061
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 11038)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11038)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001543423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001543423.1
            Genome Coverage       :: 77x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/22/2022 17:09:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,811
            CDSs (total)                      :: 2,743
            Genes (coding)                    :: 2,689
            CDSs (with protein)               :: 2,689
            Genes (RNA)                       :: 68
            rRNAs                             :: 2, 4, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 4, 2 (16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 54
            CDSs (without protein)            :: 54
            Pseudo Genes (ambiguous residues) :: 0 of 54
            Pseudo Genes (frameshifted)       :: 27 of 54
            Pseudo Genes (incomplete)         :: 27 of 54
            Pseudo Genes (internal stop)      :: 10 of 54
            Pseudo Genes (multiple problems)  :: 10 of 54
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11038
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMD00233528-rid16434743.denovo.086"
                     /strain="K18-6-464"
                     /db_xref="taxon:1280"
                     /geo_loc_name="Japan: Niigata"
     gene            195..2384
                     /locus_tag="O7798_001851"
     CDS             195..2384
                     /locus_tag="O7798_001851"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500249.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional (p)ppGpp
                     synthetase/guanosine-3',5'-bis(diphosphate)
                     3'-pyrophosphohydrolase"
                     /protein_id="HDC2864109.1"
                     /translation="MNNEYPYSADEVLHKAKSYLSADEYEYVLKSYHIAYEAHKGQFR
                     KNGLPYIMHPIQVAGILTEMRLDGPTIVAGFLHDVIEDTPYTFEDVKEIFNEEVARIV
                     DGVTKLKKVKYRSKEEQQAENHRKLFIAIAKDVRVILVKLADRLHNMRTLKAMPREKQ
                     IRISRETLEIYAPLAHRLGINTIKWELEDTALRYIDNVQYFRIVNLMKKKRSEREAYI
                     ETAIDRIRTEMDRMNIEGDINGRPKHIYSIYRKMMKQKKQFDQIFDLLAIRVIVNSIN
                     DCYAILGLVHTLWKPMPGRFKDYIAMPKQNLYQSLHTTVVGPNGDPLEIQIRTFDMHE
                     IAEHGVAAHWAYKEGKKVSEKDQTYQNKLNWLKELAEADHTSSDAQEFMETLKYDLQS
                     DKVYAFTPASDVIELPYGAVPIDFAYAIHSEVGNKMIGAKVNGKIVPIDYILQTGDIV
                     EIRTSKHSYGPSRDWLKIVKSSSAKGKIKSFFKKQDRSSNIEKGRMMVEAEIKEQGFR
                     VEDILTEKNIQVVNEKYNFANEDDLFAAVGFGGVTSLQIVNKLTERQRILDKQRALNE
                     AQEVTKSLPIKDNIITDSGVYVEGLENVLIKLSKCCNPIPGDDIVGYITKGHGIKVHR
                     TDCPNIKNETERLINVEWVKSKDATQKYQVDLEVTAYDRNGLLNEVLQAVSSTAGNLI
                     KVSGRSDIDKNAIINISVMVKNVNDVYRVVEKIKQLGDVYTVTRVWN"
     gene            2396..2848
                     /locus_tag="O7798_001852"
     CDS             2396..2848
                     /locus_tag="O7798_001852"
                     /EC_number="3.1.1.96"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500248.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-tyrosyl-tRNA(Tyr) deacylase"
                     /protein_id="HDC2864110.1"
                     /translation="MKVVVQRVKEASVTNDTLNNQIKKGYCLLVGIGQNSTEQDADVI
                     AKKIANARLFEDDNNKLNFNIQQMNGEILSVSQFTLYADVKKGNRPGFSNSKNPDQAV
                     KIYEYFNDALRAYGLTVKTGEFGTHMNVSINNDGPVTIIYESQDGKIQ"
     gene            2845..3720
                     /locus_tag="O7798_001853"
     CDS             2845..3720
                     /locus_tag="O7798_001853"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500247.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetylmuramoyl-L-alanine amidase"
                     /protein_id="HDC2864111.1"
                     /translation="MKKIEAWLSKKGLKNKRTLIVVIAFVLFIIFLFLLLNSNSEDSG
                     NITITENAELRTGPNAAYPVIYKVEKGDHFKKIGKVGKWIEVEDTSSNEKGWIAGWHT
                     NLDIVADNTKEKNPLQGKTIVLDPGHGGSDQGASSNTKYKSLEKDYTLKTAKELQRTL
                     EKEGATVKMTRTDDTYVSLENRDIKGDAYLSIHNDALESSNANGMTVYWYHDNQRALA
                     DTLDATIQKKGLLSNRGSRQENYQVLRQTKVPAVLLELGYISNPTDETMIKDQLHRQI
                     LEQAIVDGLKIYFSA"
     gene            4181..5443
                     /locus_tag="O7798_001854"
     CDS             4181..5443
                     /locus_tag="O7798_001854"
                     /EC_number="6.1.1.21"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500246.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidine--tRNA ligase"
                     /protein_id="HDC2864112.1"
                     /translation="MIKIPRGTQDILPEDSKKWRYIENQLDELMTFYNYKEIRTPIFE
                     STDLFARGVGDSTDVVQKEMYTFKDKGDRSITLRPEGTAAVVRSYIEHKMQGNPNQPI
                     KLYYNGPMFRYERKQKGRYRQFNQFGVEAIGAENPSVDAEVLAMVMHIYQSFGLKHLK
                     LVINSVGDMASRKEYNEALVKHFEPVIHEFCSDCQSRLHTNPMRILDCKVDRDKEAIK
                     TAPRITDFLNEESKAYYEQVKAYLDDLGIPYIEDPNLVRGLDYYTHTAFELMMDNPNY
                     DGAITTLCGGGRYNGLLELLDGPSETGIGFALSIERLLLALEEEGIELDIEENLDLFI
                     VTMGDQADRYAVKLLNHLRHNGIKADKDYLQRKIKGQMKQADRLGAKFTIVIGDQELE
                     NNKIDVKNMTTGESETIELDALVEYFKK"
     gene            5459..7225
                     /gene="aspS"
                     /locus_tag="O7798_001855"
     CDS             5459..7225
                     /gene="aspS"
                     /locus_tag="O7798_001855"
                     /EC_number="6.1.1.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500245.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate--tRNA ligase"
                     /protein_id="HDC2864113.1"
                     /translation="MSKRTTYCGLVTEAFLGQEITLKGWVNNRRDLGGLIFVDLRDRE
                     GIVQVVFNPAFSEEALKIAETVRSEYVVEVQGTVTKRDPETVNPKIKTGQVEVQVTNI
                     KVINKSETPPFSINEENVNVDENIRLKYRYLDLRRQELAQTFKMRHQITRSIRQYLDD
                     EGFFDIETPVLTKSTPEGARDYLVPSRVHDGEFYALPQSPQLFKQLLMISGFDKYYQI
                     VKCFRDEDLRADRQPEFTQVDIEMSFVDQEDVMQMGEEMLKKVVKEVKGVEINGAFPR
                     MTYKEAMRRYGSDKPDTRFEMELIDVSQLGRDMDFKVFKDTVENDGEIKAIVAKGAAE
                     QYTRKDMDALTEFVNIYGAKGLAWVKVVEDGLTGPIGRFFETENVETLLTLTGAEAGD
                     LVMFVADKPNVVAQSLGALRVKLAKELGLIDETKLNFLWVTDWPLLEYDEDAKRYVAA
                     HHPFTSPKEADIAKLGTAPEEAEANAYDIVLNGYELGGGSIRIHDGELQEKMFEVLGF
                     TKEQAQEQFGFLLDAFKYGAPPHGGIALGLDRLVMLLTNRTNLRDTIAFPKTASATCL
                     LTNAPGEVSDKQLEELSLRIRH"
     gene            7303..7493
                     /gene="ssrS"
                     /locus_tag="O7798_001856"
     ncRNA           7303..7493
                     /ncRNA_class="other"
                     /gene="ssrS"
                     /locus_tag="O7798_001856"
                     /product="6S RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00013"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00013"
     gene            7558..7686
                     /locus_tag="O7798_001857"
     CDS             7558..7686
                     /locus_tag="O7798_001857"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500244.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDC2864114.1"
                     /translation="MGFIAFNKCFLVEFWENNQSDNAKYKILSYYVLMYKSVKEVK"
     gene            7686..8459
                     /locus_tag="O7798_001858"
     CDS             7686..8459
                     /locus_tag="O7798_001858"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500243.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA threonylcarbamoyladenosine dehydratase"
                     /protein_id="HDC2864115.1"
                     /translation="MKHQFSRNELAIGQQGLDLLKQQTVVILGVGGVGSFAAEALART
                     NIGHIILIDKDDVDITNVNRQLHALTTTVGQSKVSLMEERIKLINPDCKVTPLHMFYT
                     EETYEEIFDNYDIDYFVDASDTIMYKVHLMKECLDRGIKVISSMGAANKTDPTRFTIS
                     DISKTHTDPMAKIIRQKLKKLGIRKGIPVVFSDESPIVIREDVKDIVGDKNAINRKGQ
                     MPPSSNAFVPSVVGLICASYVVNDVLKDIPVRRIKDKGQ"
     gene            complement(8620..9894)
                     /locus_tag="O7798_001859"
     CDS             complement(8620..9894)
                     /locus_tag="O7798_001859"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500242.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="replication-associated recombination protein A"
                     /protein_id="HDC2864116.1"
                     /translation="MSTEPLASRMRPKNIDEIISQQHLVGPRGIIRRMVDTKKLTSMI
                     FYGPPGIGKTSIAKAISGSTQYKFRQLNAVTNTKKDMQLVVEEAKMSGQVILLLDEIH
                     RLDKAKQDFLLPHLENGKIVLIGATTSNPYHAINPAIRSRAQIFELYPLNDEDVRQAL
                     TRAIEDDENGLKTYQPKIDEDAMTYFSTQSQGDVRSALNALELAVLSADNDKDGYRHV
                     TLQDAKDCLQKGAFVSDKDGDMHYDVMSAFQKSIRGSDVNAALHYLARLIEAGDLPTI
                     VRRLLVISYEDIGLASPNAGQRTLAAIESAERLGLPEARIPLSQAVIELCLSPKSNSA
                     MSAIDSALSDIRNGHVGQIPNHLKDGHYQGAKDLGRSIGYKYPHQYVNGYVSQQYLPD
                     KLKNKIYYEPKTTSKSEQQLKEIYNNLLKQRP"
     gene            9979..10401
                     /locus_tag="O7798_001860"
     CDS             9979..10401
                     /locus_tag="O7798_001860"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002458938.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Rrf2 family transcriptional regulator"
                     /protein_id="HDC2864117.1"
                     /translation="MKISTKGRYGLTLMISLAKKEGQGCISLKSIAEENNLSDLYLEQ
                     LVGPLRNAGLIRSVRGAKGGYQLRVPAEEISAGDIIRLLEGPITFVESIESEPPAQKQ
                     LWIRMRDAVRDVLDNTTLKYLAEYVDTSEDLDGYMFYI"
     gene            10501..10683
                     /locus_tag="O7798_001861"
     CDS             10501..10683
                     /locus_tag="O7798_001861"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500239.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CsbD family protein"
                     /protein_id="HDC2864118.1"
                     /translation="MADESKFDQFKGNVKETVGNVTDNKELEKEGQQDKATGKAKEVV
                     ENAKNKITDAIDKLKK"
     gene            10723..10869
                     /locus_tag="O7798_001862"
     CDS             10723..10869
                     /locus_tag="O7798_001862"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500238.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDC2864119.1"
                     /translation="MSFMDKAKDAVEKFKNSDNEQVKNVKDKINEYTGSNNEEKKENE
                     DKEK"
BASE COUNT         3970 a         1541 c         2167 g         3360 t
ORIGIN      
        1 gtaaaagttt taaaagtagg aatagtatac aaattaaact cgctcaagta aaattaatat
       61 tacgattaat gacgacagga taaatattta tcgtcgacgg acgtatgatt ggtgtgggac
      121 aaatactatt caacaagagt acctaaatca ttgtttaagg cgaagtaata aatatgaatg
      181 gggtgtatca tataatgaac aacgaatatc catatagtgc agacgaagtt cttcacaaag
      241 caaaatcata tttgtcagca gatgaatatg agtatgtttt aaaaagctat catattgctt
      301 atgaagcaca taaaggtcag ttccgaaaaa acggattacc atacattatg catcctatac
      361 aagttgcagg tattttaaca gaaatgcgat tagacggacc gacgattgtc gcaggttttt
      421 tgcatgatgt aattgaagat acaccgtata catttgaaga tgtaaaagaa atattcaatg
      481 aagaagttgc tcgaattgtt gatggtgtga cgaagcttaa aaaagtaaaa taccgctcaa
      541 aagaagaaca acaagctgaa aatcatcgca agttatttat tgcgattgcc aaagatgtac
      601 gcgtaatttt ggtgaaatta gcagacagat tacataatat gcgtaccttg aaagccatgc
      661 cgcgcgaaaa acaaattaga atttctcgag aaacattaga aatttatgca ccattagcac
      721 atcgtcttgg tattaataca atcaaatggg aactagaaga tacggctctt cgttatattg
      781 ataatgtgca atattttaga atagtcaatt taatgaagaa gaaacgtagt gaacgtgaag
      841 cgtatatcga aacggctatt gatagaatac gtactgaaat ggaccgaatg aatatcgaag
      901 gcgatataaa tggtagacct aaacatattt acagtattta tcggaaaatg atgaagcaga
      961 aaaaacaatt tgatcaaatt tttgatttgt tggcgatacg tgttattgtc aattctatta
     1021 atgattgtta tgcgatactt gggttggtgc atacgttatg gaaaccgatg ccaggacgtt
     1081 ttaaagatta tattgcaatg cctaaacaaa atttgtatca gtcattgcat actacagtag
     1141 taggcccaaa tggagacccg ctcgaaatcc aaatacgaac gtttgatatg cacgaaattg
     1201 ctgagcatgg tgttgcagca cactgggctt acaaagaagg taaaaaagta agtgaaaaag
     1261 atcaaactta tcaaaataag ttaaattggt taaaagaatt agctgaagcg gatcatacat
     1321 cgtctgacgc tcaagaattt atggaaacct taaaatatga cttacagagt gacaaagtat
     1381 acgcatttac cccagcgagt gatgttattg agttgccata tggtgctgtg ccgattgatt
     1441 ttgcttatgc gattcacagt gaagtaggta ataagatgat tggtgccaag gtgaatggca
     1501 aaattgtacc aattgactat attttacaaa caggcgatat tgttgaaata cgtactagta
     1561 aacattcata tggaccaagt cgtgattggt tgaaaattgt taaatcgtct agtgccaaag
     1621 gtaaaattaa aagtttcttc aaaaaacaag atcgttcatc taatattgaa aaaggccgaa
     1681 tgatggttga agctgaaata aaagagcaag gatttagagt cgaagatatt ttgacagaga
     1741 aaaatattca ggttgttaat gaaaaatata actttgcaaa tgaagatgat ttattcgcag
     1801 ctgtaggatt tggcggcgtg acatccttac agattgttaa taaattaact gaaagacaac
     1861 gtattttaga taaacaacgt gctttaaatg aagcacaaga agttacgaaa tcattgccta
     1921 ttaaagacaa catcattact gatagtggtg tctatgtaga aggtttagaa aatgtactta
     1981 tcaagttgtc aaaatgttgt aatcctatac caggtgatga tattgtaggt tatatcacca
     2041 aaggtcacgg tattaaagta catcgcactg attgcccaaa tattaagaac gaaactgaac
     2101 gactaattaa tgttgaatgg gtaaaatcaa aagacgcaac tcaaaaatat caggttgatt
     2161 tagaggtaac tgcgtatgac cgaaatggct tgttgaatga agtactacaa gctgttagct
     2221 cgacagccgg caatttaatt aaagtttcag gacgttcaga tattgataaa aatgcaataa
     2281 taaatattag tgtcatggtg aaaaacgtga atgatgttta tcgtgtggta gaaaagatca
     2341 aacaacttgg tgatgtttat acagtaacaa gagtttggaa ctagaggtgc aaaatatgaa
     2401 agtagttgta caaagagtta aagaagcatc ggtgacgaat gatacattaa ataatcaaat
     2461 caaaaaagga tattgtttat tagtcggtat cggtcagaac tctacagagc aagatgcaga
     2521 tgtaattgca aagaaaattg ctaatgcaag attatttgaa gatgacaata ataaattaaa
     2581 ctttaatatc caacaaatga atggtgaaat actatcagtt tcacaattta ctctctatgc
     2641 agatgtaaaa aaaggtaacc gtccaggttt ctcaaattct aaaaatcctg atcaagcggt
     2701 aaaaatttat gagtatttta atgatgcgct acgagcgtat ggtcttactg tgaaaacagg
     2761 tgaatttgga acacacatga atgttagcat aaataatgat ggtccagtca ctattattta
     2821 tgaaagtcag gacggcaaaa ttcaatgaaa aaaatagagg catggttatc taaaaagggt
     2881 cttaaaaata aacgtactct aatagtagtg attgcctttg tcttatttat catcttttta
     2941 tttttattgc tgaatagcaa tagtgaagat agtgggaaca tcacgataac tgaaaatgct
     3001 gaattacgta caggtccaaa cgctgcgtat ccagtcatat ataaagttga aaaaggtgac
     3061 cattttaaaa agattggtaa agtaggtaaa tggattgaag ttgaagatac atccagtaat
     3121 gaaaaaggtt ggatagctgg atggcacaca aatttagata ttgtcgcgga taatacgaag
     3181 gagaaaaatc ctttgcaagg taaaacaata gtgcttgatc ctggtcatgg aggtagtgac
     3241 cagggtgctt caagcaatac taaatataaa agtttagaaa aagattatac gttgaaaaca
     3301 gcaaaagaat tgcagcgtac tttagaaaaa gaaggcgcaa ctgttaagat gacaagaaca
     3361 gacgatacat atgtttcact agaaaatcgt gatatcaaag gcgatgccta tttgagtata
     3421 cataatgatg cgttagaatc atctaatgca aatggaatga cagtttattg gtatcatgat
     3481 aatcaaagag ctttagcaga tacgttagac gctacgattc agaagaaagg tctactttct
     3541 aatcgcggtt caagacaaga aaattatcaa gtgttaagac aaacaaaagt tcctgctgtt
     3601 ttattagaat taggttatat tagtaaccca actgatgaaa cgatgattaa agatcaatta
     3661 catagacaaa ttttagaaca agcaattgtt gatggcctta aaatttattt ttctgcgtag
     3721 ggcttgcaaa aatatgtgaa agtagttatc attgatattg aattttataa ctaaaaccgt
     3781 tagtattctt gaaatggtaa atgaaatagg tagcaatcta actaagattg tgtaggaata
     3841 taatccatag actgaaagat tatgctgagt agtttatata cattgaacac aagaagaggt
     3901 gctttatgaa aagtaaagcc gttaaacgta cgttaaacgt tttgagtggg tttattaaat
     3961 gcacgcttat aaaaagtaat gatgattaca attaggcatg ttttttaaac caatgagggt
     4021 ggcaacacgg atattcgtcc cttgtgcagt ttcaggctgt gcaagggctt tttcttttgc
     4081 ttttaagatt atgatttatc gtgcaaagtt aagtggtcgt atatagtttt agttttaaaa
     4141 aggtaattaa ataaaatagt ttgccgaggg agatgtcaaa atgattaaaa tacctagagg
     4201 gacgcaggat attttacctg aagattcaaa gaaatggcgt tacattgaaa atcaattaga
     4261 tgaattaatg acattttata attataaaga aataagaaca ccaatttttg aaagtacaga
     4321 tctttttgca agaggtgttg gtgattcaac cgatgtcgta caaaaagaaa tgtatacatt
     4381 taaagataaa ggcgatagaa gtattacatt aagacctgag ggaacagctg cagttgtgcg
     4441 ttcatatatt gaacataaaa tgcaaggtaa tccaaaccaa ccaattaaac tttattacaa
     4501 tggaccgatg tttagatatg aacgtaagca aaaaggacgc tatcgtcaat ttaatcaatt
     4561 tggtgtagaa gctattggtg ctgaaaatcc tagcgtagat gcagaagtat tagctatggt
     4621 tatgcatatt tatcaatcat ttggattaaa acatttaaag cttgttatta atagtgtagg
     4681 ggatatggcg tctcgaaaag aatataacga agcgttagtg aaacactttg aaccagtaat
     4741 tcatgaattt tgttcagatt gtcaatcacg tttgcataca aatccgatgc gaattttgga
     4801 ttgtaaagta gaccgtgata aagaagcgat taagactgca cctagaatca ctgatttctt
     4861 aaatgaggaa tctaaggcat attatgaaca agtaaaagct tatttagatg atttaggtat
     4921 tccatatatt gaagatccta acttagttcg tggattggat tattatacac atacagcatt
     4981 tgaattaatg atggataacc ctaactatga tggtgccatt acaacgcttt gtggtggtgg
     5041 ccgttataat ggtttattag aattgctaga tggtccaagt gaaacaggta ttggttttgc
     5101 gctaagtata gaacgattat tgcttgcact tgaagaagaa ggtatcgaat tagatattga
     5161 agaaaactta gatttattca ttgttacaat gggtgatcaa gcagatcgat atgctgtgaa
     5221 gctattaaat catttgagac ataatggtat taaagcagat aaagactatt tacagcgtaa
     5281 aattaaagga caaatgaaac aagcagaccg tttaggtgcc aagtttacaa tcgttattgg
     5341 tgatcaagaa ttagaaaata ataaaatcga tgttaaaaat atgacaactg gtgaatctga
     5401 aacaattgaa ttagacgcat tagtcgaata ttttaagaag tagagagggc gttaaaatat
     5461 gagtaagaga acaacttatt gtggattagt tactgaggca tttttaggac aagaaattac
     5521 attaaaagga tgggttaaca atcgtcgtga ccttggtgga ttgattttcg ttgatttaag
     5581 agatagagaa ggaattgtac aagtcgtgtt taatcctgca ttttcagaag aggcattgaa
     5641 aattgctgaa acagtacgtt ctgaatatgt tgtagaagtt caaggtacag ttacgaagcg
     5701 tgaccctgaa acagttaatc ctaaaattaa aactggccaa gttgaagtac aagttacaaa
     5761 tattaaagtg attaataaat ctgagacacc accattttct ataaatgaag aaaatgttaa
     5821 cgttgatgaa aatattcgat taaaataccg ttatttagat ttacgtcgtc aagagttagc
     5881 gcaaacattt aaaatgagac atcaaattac acgttctatt cgtcaatatt tggatgatga
     5941 agggttcttt gacatcgaaa caccagtact aacgaagtca acacctgagg gtgcacgtga
     6001 ctatttagta ccatctcgtg ttcatgatgg tgaattttat gcattaccac aatcaccaca
     6061 attatttaag caattattga tgattagtgg atttgacaaa tactaccaaa tcgtaaaatg
     6121 cttccgtgac gaagatttac gtgcagatcg tcaacctgaa tttacacaag tcgatattga
     6181 aatgagtttt gtagaccaag aagatgtgat gcaaatgggt gaagaaatgc ttaaaaaagt
     6241 tgttaaagaa gttaaaggcg ttgaaattaa tggcgctttc ccacgcatga catataaaga
     6301 agcgatgcgt cgctatggtt ctgataaacc agatacacgt tttgaaatgg aattaattga
     6361 cgtttctcaa ttaggacgtg atatggactt taaagtattt aaagatactg ttgaaaatga
     6421 tggtgaaatt aaagcaattg tcgctaaagg tgcagctgaa caatatactc gtaaagatat
     6481 ggatgcttta acagaatttg taaacatcta tggtgctaaa ggattagcgt gggttaaagt
     6541 tgtggaagat ggtttgacag gtccaattgg acgtttcttt gaaacagaaa atgttgaaac
     6601 attacttaca ttaactggtg ctgaagctgg tgacttagta atgtttgttg cagacaaacc
     6661 aaatgtcgtt gcacaaagtt taggtgcatt acgtgtcaaa ttagctaaag aattaggttt
     6721 aatcgatgaa acaaaattaa acttcttatg ggtgacagat tggccattat tagaatatga
     6781 tgaagatgcg aagcgttacg ttgcagcaca tcatccattt acatctccaa aagaagctga
     6841 tattgctaag cttggcactg cgccagaaga agctgaggca aatgcttatg acatagtatt
     6901 aaatggttat gaattaggtg gcggttcaat cagaattcat gatggtgagt tacaagaaaa
     6961 aatgttcgaa gttcttggat ttactaaaga acaagcacaa gaacagttcg gcttcttact
     7021 agatgcattt aaatatggtg caccaccaca tggcggtatt gcattaggat tagaccgatt
     7081 agtcatgtta ttgactaata gaacaaactt gagagataca atcgcattcc ctaaaacagc
     7141 atctgctaca tgtttattaa cgaatgcgcc tggtgaagtt tctgataaac aattagaaga
     7201 actttctttg cgaattcgtc actaaatttt aaaaaatcaa taaactttgg tttgttataa
     7261 tttcattaat tttaattatg tggtaatata acatcataag atagtcatct gagttgttcg
     7321 taagtttgct ttttaatttg ggcctaacac tctttgatca agggagccca atgggttttc
     7381 ttgcagcgta cacgccttat atgaaggacg tacaaaacaa gaaacagggc acccacctgt
     7441 atataacagg ccgaatgatc aagctattat aactacggca atacggactc tatcgatacg
     7501 caagactttg tcttgcgtat ttttatgcgt ttctttaagt ttttaataaa gaattagttg
     7561 ggttttatag cgtttaataa atgtttcctc gttgaatttt gggaaaataa tcaaagtgat
     7621 aatgctaaat ataaaatttt aagttactat gtacttatgt ataaatcagt gaaagaggta
     7681 aaataatgaa acatcaattt tcaagaaatg aactagcgat tggacaacaa ggtttagatt
     7741 tattgaagca acaaactgtt gtcatacttg gcgttggagg tgttggttca tttgctgctg
     7801 aagcattagc aagaacgaat attggtcata ttatattaat agataaagat gatgttgata
     7861 ttacaaatgt aaacagacaa ttacacgctt taactacaac ggtaggacaa agtaaagttt
     7921 ctttgatgga agaacgtatt aaattaatta atccagattg taaagtcacg cccttacata
     7981 tgttttatac agaagagaca tatgaagaaa ttttcgataa ctacgatata gattattttg
     8041 tagatgcaag tgatacaata atgtacaaag tacacttaat gaaagagtgt cttgaccgag
     8101 ggattaaagt gatttccagt atgggtgctg caaataaaac agatccaaca cgttttacaa
     8161 tttcagatat ctctaaaaca cataccgatc caatggccaa aattattcgt caaaaattga
     8221 aaaaactagg aattcgtaaa gggattccag ttgtattttc agatgaaagt ccaattgtca
     8281 taagagaaga tgtaaaagat atagttggag ataaaaatgc tatcaatcga aaaggacaaa
     8341 tgccaccttc ttcaaatgcc tttgtgccaa gtgttgttgg attaatttgt gcaagttatg
     8401 tggtgaatga cgtattaaaa gatattccag ttcgtcgcat taaagacaaa gggcaataat
     8461 tcattttgaa agggataatt ttcaacgtaa ggcaagtgta accacaccat aaaactaaaa
     8521 ctgactagtt cgcaagcata gtagaatatg cctcgtgtac tagtcagttt tgatttgatt
     8581 atagctaaaa tatcaaaggt aatcgattta atcttatttt tacggccttt gtttaagtaa
     8641 gttgttatat atttctttga gttgttgttc acttttagat gtcgtttttg gttcgtaata
     8701 aattttgttt tttagtttat caggtaaata ttgctgtgaa acatagccat taacatattg
     8761 gtgtggatat ttgtaaccaa tagatcggcc tagatcttta gcaccttgat aatgtccatc
     8821 ttttaaatgg tttggaattt ggcccacatg accgtttcta atatcggaca atgcactatc
     8881 aatggcactc attgctgaat ttgacttagg tgataagcat agttcgatta ctgcttggct
     8941 tagtggaatt ctagcttctg gtaaacctag acgttctgct gattcaatag cagcaagtgt
     9001 tctctgacca gcattaggtg aggctaagcc tatatcctca tagctaatta caagtaatcg
     9061 tcgaactatt gtaggtaaat ctccagcttc aattaatcgt gctaaataat gtaaagcggc
     9121 attgacgtcg ctaccacgga tagatttttg gaaagcgctc ataacatcgt aatgcatgtc
     9181 accatccttg tcacttacaa atgcaccttt ttgtaaacag tctttagcat cttgcaatgt
     9241 aacatgtcga taaccgtctt tgtcattatc tgcgcttaat acagctaatt ccaatgcatt
     9301 taacgcacta cgaacatcac cttggctttg tgtagaaaag taggtcatgg catcttcatc
     9361 aattttgggt tgatatgttt tcaaaccatt ctcatcatct tctattgcac gagttaacgc
     9421 ttggcgcaca tcttcgtcat ttaaaggata taactcgaaa atttgcgctc ttgaacgaat
     9481 cgctggattg atagcatgat aaggatttga agttgtagca ccgatcaaga cgattttgcc
     9541 attttctaaa tgaggtaata aaaagtcttg tttagcttta tctagtcgat gtatttcatc
     9601 taataacaag ataacttgac cagacatttt agcttcttca acaacaagtt gcatatcttt
     9661 tttagtgtta gttacagcat tcaattgtct gaatttatat tgcgtactgc ccgaaattgc
     9721 tttggcaata cttgttttgc ctataccagg tggaccataa aaaatcattg aagttaattt
     9781 ttttgtatca accattcttc tgataatgcc tcttggtcca actaaatgtt gttgggaaat
     9841 gatttcatct atattttttg ggcgcattct cgatgctaat ggttctgtac tcacatttgt
     9901 cacacctttc ttatactatc ttaactcaaa aaatgctaaa atgggaatat caatattcga
     9961 attaagtgag gttatacaat gaaaatttct actaaaggga gatatggact tacattgatg
    10021 atttctcttg ctaaaaaaga ggggcaagga tgtatatcat taaagtcaat tgctgaagaa
    10081 aataatttga gtgatttata tttagaacag cttgtaggtc ctttaagaaa tgcggggtta
    10141 attcgaagtg tacgcggtgc taaaggtgga taccaattaa gagtgccagc ggaagaaatc
    10201 tcagcagggg atattataag actgttagaa ggtccaatta catttgttga aagtattgaa
    10261 tcagaaccac ctgcgcaaaa acaactatgg attcgcatga gagatgcagt gagagatgtt
    10321 ttagataata caacattgaa atatttagcg gaatatgtag atacaagtga agatttagac
    10381 ggatacatgt tttatattta atcgtataaa tactatacta taacataaaa acttcatatt
    10441 ataatgttta gcgaacctcc ttagtggtat ataaatatat acatccaagg aggtttcact
    10501 atggcagacg aaagtaagtt cgatcaattt aaaggaaatg ttaaagaaac agtaggtaac
    10561 gttactgata acaaagaatt agaaaaagaa ggtcagcaag ataaagcgac tggtaaagca
    10621 aaagaagttg ttgaaaatgc taaaaacaaa ataactgatg caattgataa acttaaaaaa
    10681 taagttcaat taaactaatc aaatataaga ggagcgatta atatgagttt tatggataaa
    10741 gctaaagacg cagtagaaaa atttaaaaat agcgataatg aacaagttaa aaatgtaaaa
    10801 gataagataa atgaatatac aggatcgaat aacgaagaga aaaaagaaaa tgaagataaa
    10861 gagaaataaa tttctttaaa ttttggatat gcttttcaat attttgaaag cgccccatca
    10921 aataaacact tacacagtgt aaagttgaag gggcgctttc atatttgcat tagaatttta
    10981 agtgaatttg aatcattact aaaataaatg attgaacaat aaagacatct ttcattca
//
LOCUS       DALPQQ010000087        10937 bp    DNA     linear   BCT 22-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus strain K18-6-464
            SAMD00233528-rid16434743.denovo.087, whole genome shotgun sequence.
ACCESSION   DALPQQ010000087 DALPQQ010000000
VERSION     DALPQQ010000087.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMD00233528
            Sequence Read Archive: DRR236061
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 10937)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10937)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001543423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001543423.1
            Genome Coverage       :: 77x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/22/2022 17:09:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,811
            CDSs (total)                      :: 2,743
            Genes (coding)                    :: 2,689
            CDSs (with protein)               :: 2,689
            Genes (RNA)                       :: 68
            rRNAs                             :: 2, 4, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 4, 2 (16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 54
            CDSs (without protein)            :: 54
            Pseudo Genes (ambiguous residues) :: 0 of 54
            Pseudo Genes (frameshifted)       :: 27 of 54
            Pseudo Genes (incomplete)         :: 27 of 54
            Pseudo Genes (internal stop)      :: 10 of 54
            Pseudo Genes (multiple problems)  :: 10 of 54
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10937
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMD00233528-rid16434743.denovo.087"
                     /strain="K18-6-464"
                     /db_xref="taxon:1280"
                     /geo_loc_name="Japan: Niigata"
     gene            400..1353
                     /locus_tag="O7798_001863"
     CDS             400..1353
                     /locus_tag="O7798_001863"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499719.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDC2864120.1"
                     /translation="MKKTLGCLLLIMLLVVAGCSFGGNHKLSSKKSEESKQETVKKES
                     EEEKDPDLEKYEEIEKKMKGIKDAPSLDKLDPLMTEKSFTNSKGIQGWKDYKELMGKV
                     ELADYRFTKDSKGSSIKDVDAFFKGKKGIKRKVIETHDDVKQVDYWYVDPDGKKIGNS
                     NTPVFYAEIMTKYKDGKLVYASVEPGSYVIHKDDAIKYDDYSKLKKLSQLTKLDHPKP
                     VPYSVAQIKSFGVPLTSVSFMTHGSKDTKDEVLPALAYFTFSPKNYEDKSNPDPKVLN
                     LVHMDFLNASSDFGNAHFVVLSKYIKEYESNYETSSDDSLK"
     gene            complement(1516..1719)
                     /locus_tag="O7798_001864"
     CDS             complement(1516..1719)
                     /locus_tag="O7798_001864"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001830141.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TM2 domain-containing protein"
                     /protein_id="HDC2864121.1"
                     /translation="MQVNKVIYILLALFLGSFGIHKFYAGKNMQGILHLIFCWTGIPH
                     ILAIISAVITVFKPADEQGNVTL"
     gene            2018..2506
                     /locus_tag="O7798_001865"
     CDS             2018..2506
                     /locus_tag="O7798_001865"
                     /EC_number="3.5.1.88"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499721.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide deformylase"
                     /protein_id="HDC2864122.1"
                     /translation="MAIKKLVPASHPILTKKAQAVKTFDDSLKILLQDLEDTMYAQEA
                     AGLCAPQINQSLQVAIIDMEMEGLLQLVNPKIISQSNETITDLEGSITLPDVYGEVTR
                     SKMIVVESYDVNGNKVELTAHEDVARMILHIIDQMNGIPFTERADRILTDKEVEAYFI
                     ND"
     gene            2499..3434
                     /locus_tag="O7798_001866"
     CDS             2499..3434
                     /locus_tag="O7798_001866"
                     /EC_number="2.1.2.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499722.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methionyl-tRNA formyltransferase"
                     /protein_id="HDC2864123.1"
                     /translation="MTKIIFMGTPDFSTTVLEMLIAEHDVIAVVTQPDRPVGRKRVMT
                     PPPVKKVAMKYDLPVYQPEKLSGSEELEQLLQLDVDLIVTAAFGQLLPESLLALPNLG
                     AINVHASLLPKYRGGAPIHQAIIDGEQETGITIMYMVKKLDAGNIISQQAIKIEENDN
                     VGTMHDKLSVLGAYLLKETLPSIIEGTNESVPQDDTQATFASNIRREDERISWNKPGR
                     QVFNQIRGLSPWPVAYTTMDDTNLKIYDAELVETNKINEPGTIIETTKKAIIVATNDN
                     EAVAIKDMQLAGKKRMLAANYLSGAQNTLVGKKLI"
     gene            3431..4738
                     /gene="rsmB"
                     /locus_tag="O7798_001867"
     CDS             3431..4738
                     /gene="rsmB"
                     /locus_tag="O7798_001867"
                     /EC_number="2.1.1.176"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499723.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA (cytosine(967)-C(5))-methyltransferase
                     RsmB"
                     /protein_id="HDC2864124.1"
                     /translation="MIENVRSLAFDTIQDILNEGAYSNLRINEVLSENELNAMDKALF
                     TEIVYGTVKRKYTLDFYLKPFVKTKIKAWVRQLLWMSIYQYVYLDKVPNHAIINEAVE
                     IAKERGGYHNGNVVNGILRTMMRSDLPDFNEIADPKKRMAIEYSMPKWIIDHWATHYG
                     LEETETILQSFLETTSTTVRANLTRASLDDIIEKLQDEGYDVEKDHDLPYCLHIGGQP
                     IIHSRSFKDGFVSIQDKSSMFVAHIMNVDRHDHVLDACSAPGGKACHIAEVLMPEGQV
                     DASDIHDHKIDLINFNIKKLRLTNIKAFQHDATKPYDKTYDKILVDAPCSGLGVMRHK
                     PEIKYTQSKQHIESLVELQLEILENVKNNVKIGGEIIYSTCTIEQLENENVIYTFLKN
                     NKNFEFEPFQHPITGELVKTLQIMPQDFNSDGFFITKIKRKDN"
     gene            4741..5835
                     /gene="rlmN"
                     /locus_tag="O7798_001868"
     CDS             4741..5835
                     /gene="rlmN"
                     /locus_tag="O7798_001868"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002435140.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA (adenine(2503)-C(2))-methyltransferase
                     RlmN"
                     /protein_id="HDC2864125.1"
                     /translation="MITAEKKKKNKFLPNFDKQSIYSLRFDEMQNWLVEQGQQKFRAK
                     QIFEWLYQKRVDSIDEMTNLSKDLRQLLKDNFTVTTLTTVVKQESKDGTIKFLFELQD
                     GYTIETVLMRHDYGNSVCVTTQVGCRIGCTFCASTLGGLKRNLEAGEIVSQVLTVQKA
                     LDATEERVSQIVIMGIGEPFENYDEMMDFLRIVNDDNSLNIGARHITVSTSGIIPRIY
                     DFADEDIQINFAVSLHAAKDEVRSRLMPINRAYNVEKLIEAIQYYQEKTNRRVTFEYG
                     LFGGVNDQLEHARELAHLIKGLNCHVNLIPVNHVPERNYVKTAKNDIFKFEKELKRLG
                     INATIRREQGSDIDAACGQLRAKERQVETR"
     gene            5842..6585
                     /locus_tag="O7798_001869"
     CDS             5842..6585
                     /locus_tag="O7798_001869"
                     /EC_number="3.1.3.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499725.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein-serine/threonine phosphatase Stp1"
                     /protein_id="HDC2864126.1"
                     /translation="MLEAQFFTDTGQHRDKNEDAGGIFYNQTNQQLLVLCDGMGGHKA
                     GEVASKFVTDELKSRFEAENLIEQHQAENWLRNNIKDINFQLYHYAQENAEYKGMGTT
                     CVCALVFEKSVVIANVGDSRAYVINSRQIEQITSDHSFVNHLVLTGQITPEEAFTHPQ
                     RNIITKVMGTDKRVSPDLFIKRLNFYDYLLLNSDGLTDYVKDNEIKRLLVKEGTIEDH
                     GDQLMQLALDNHSKDNVTFILAAIEGDKV"
     gene            6582..8576
                     /gene="pknB"
                     /locus_tag="O7798_001870"
     CDS             6582..8576
                     /gene="pknB"
                     /locus_tag="O7798_001870"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499726.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine/threonine protein kinase Stk1"
                     /protein_id="HDC2864127.1"
                     /translation="MIGKIINERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIP
                     PREKEETLKRFEREVHNSSQLSHQNIVSMIDVDEEDDCYYLVMEYIEGPTLSEYIESH
                     GPLSVDTAINFTNQILDGIKHAHDMRIVHRDIKPQNILIDSNKTLKIFDFGIAKALSE
                     TSLTQTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNGETAVSIA
                     IKHIQDSVPNVTTDVRKDIPQSLSNVILRATEKDKANRYKTIQEMKDDLSSVLHENRA
                     NEDVYELDKMKTIAVPLKKEDLAKHISEHKSNQPKRETTQVPIVNGPAHHQQFQKPEG
                     TVYEPKPKKKSTRKIVLLSLIFSLLMIALVSFVAMAMFGNKYEETPDVIGKSVKEAEQ
                     IFNKNNLKLGKISRSYSDKYPENEIIKTTPNTGERVERGDSVDVVISKGPEKVKMPNV
                     IGLPKEEALQKLKSLGLKDVTIEKVYNNQAPKGYIANQSVTANTEIAIHDSNIKLYES
                     LGIKQVYVEDFEHKSFSKAKKALEEKGFKVESKEEYSDDIDEGDVISQSPKGKSVDEG
                     STISFVVSKGKKSDSSDVKTTTESVDVPYTGKNDKSQKVKVYIKDKDNDGSTEKGSFD
                     ITSDQRIDIPLRIEKGKTASYIVKVDGKTVAEKEVSYDDV"
     gene            8804..9679
                     /gene="rsgA"
                     /locus_tag="O7798_001871"
     CDS             8804..9679
                     /gene="rsgA"
                     /locus_tag="O7798_001871"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499727.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome small subunit-dependent GTPase A"
                     /protein_id="HDC2864128.1"
                     /translation="MKTGRIVKSISGVYQVDVNGERFNTKPRGLFRKKKFSPVVGDIV
                     EFEVQNINEGYIHQVFERENELKRPPVSNIDTLVIVMSAVEPNFSTQLLDRFLVIAHS
                     YQLNARILVTKKDKTPIEKQFEINELLKIYENIGYETEFIGNDDDRKKIVEAWPAGLI
                     VLSGQSGVGKSTFLNHYRPELNLETNDISKSLNRGKHTTRHVELFERQNGYIADTPGF
                     SALDFDHIDKDEIKDYFLELNRYGETCKFRNCNHIKEPNCNVKHQLEIGNIAQFRYDH
                     YLQLFNEISNRKVRY"
     gene            9680..10324
                     /locus_tag="O7798_001872"
     CDS             9680..10324
                     /locus_tag="O7798_001872"
                     /EC_number="5.1.3.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499728.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribulose-phosphate 3-epimerase"
                     /protein_id="HDC2864129.1"
                     /translation="MTKLYPSLLSVDFLDLQHELKRLEEAGVDGVHFDVMDGQFVPNI
                     SIGLPILDAVRKGTTLPIDVHLMIENPEKYIASFAEHGADMISIHVESTPHIHRAIQM
                     IKHLDKKAGVVINPGTPISQIEPILDIVDYVLVMTVNPGFGGQSFIDQCVEKIAGLNA
                     IKMERQLNFDIEVDGGVNTDTAKVCVENGATMLVTGSFFFKQEDYKKVTQALKG"
     gene            10331..>10937
                     /locus_tag="O7798_001873"
     CDS             10331..>10937
                     /locus_tag="O7798_001873"
                     /EC_number="2.7.6.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499729.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine diphosphokinase"
                     /protein_id="HDC2864130.1"
                     /translation="MHINLLCSDRHLPQDIWAKSNEGKWGGVDRGALILLKHQIIPFF
                     SVGDFDSVSKEERQLLTEQLQIKPVQAEKADTDLALAVDKAVALGFDSITIYGATGGR
                     LDHFFGAIQLLLKKAYYKHDVHIEVIDQQNKIELLPKGQHTVEKDKSYPYISFIPMTD
                     DVELSLAGFKYNLARQMLNIGSTLTISNEIESLQAKVTVHDG"
BASE COUNT         4082 a         1492 c         2033 g         3330 t
ORIGIN      
        1 tttaaattag cagtttatat tctgtctttt tatatggctt tataacttac gtgattttgg
       61 tttgataagg aatttattag tattttcatt tacgaattct gattttaatg caagcgccat
      121 acttactgat gaataaaagt actaatgatt aaacaaacta tttttaaatg gcaaattgaa
      181 atagtgcgaa ttttaaactt ataaattaat ggctataaac tattttatat ctatctatgt
      241 tttaactact taaattatta gaaaaaacaa ttttcttaaa ttatcaatta aagtatttaa
      301 aaatattgat ggttaatgta aaatatcaat ataaataagt tttttaaatt tatgtatgtt
      361 tatttgattc aaacaaaata acttaagagg agaaagttta tgaaaaagac actgggatgt
      421 ttacttttaa ttatgctttt agtcgtagca ggttgttctt ttggtgggaa tcataaatta
      481 tcatcaaaga aatcagaaga atcaaaacaa gaaactgtaa aaaaagaatc ggaagaagag
      541 aaagatccag atttagagaa atatgaagaa atagagaaga aaatgaaagg aattaaagat
      601 gcgccatctc ttgataagtt ggatccatta atgacagaaa agtcgtttac gaatagtaaa
      661 gggattcaag gatggaaaga ttacaaagaa ttaatgggta aagtggaact tgcagattat
      721 agatttacta aagattcaaa aggatcttca ataaaagatg ttgatgcatt ctttaaaggt
      781 aagaaaggta taaaaaggaa agtgattgaa acacacgatg atgtaaaaca agttgattat
      841 tggtatgtag atccagatgg aaagaaaatt ggcaattcaa acacacctgt tttttacgca
      901 gaaattatga caaaatataa agatggaaag ttagtttatg catcagtcga accaggatct
      961 tacgtaatac ataaagatga tgcaattaaa tatgacgatt attctaagtt aaaaaaatta
     1021 agtcagctaa ctaaacttga tcatccaaaa ccagttccat atagcgtagc tcaaatcaaa
     1081 tctttcggag tacctttaac aagcgtttca tttatgacac atggatcaaa ggatactaaa
     1141 gatgaagtgt tgccggcatt ggcctatttc actttttcac caaaaaatta tgaagacaag
     1201 tctaatccag atccaaaagt tttaaattta gtacatatgg atttcttaaa tgcatctagt
     1261 gattttggta acgcacattt tgttgtttta agtaaatata ttaaagagta tgaatcaaac
     1321 tatgaaacat cgtcagatga ttctttaaaa tagtatttac tgtgtgaaaa ataaatagtg
     1381 tactacatta aataatcgca ataataatcc cgataaacaa tcagcattac tgcttatcac
     1441 atagagttcg taataactat aactctatga ttcgcaaata ataaatgatt gtcatcggga
     1501 tttattttta tcaatttata aagtgacatt accttgttca tcagcaggtt tgaaaacagt
     1561 aatcactgca ctaataattg ctaaaatgtg tgggatacct gtccaacaga atattaagtg
     1621 tagaatacct tgcatattct tgccggcata aaatttatga ataccaaaac tacctaagaa
     1681 caatgctaat aaaatataaa taactttgtt tacttgcatt tctttccctc cagttgaatt
     1741 gcttataatg acattagctt ctctttttat tatacccact tttagttcaa acattctagt
     1801 ttaagcattc ccaatcatct aaatttcagt tattcaatcc ttacaataaa tttaggatta
     1861 catttcagtt gcattgtatt attttacgtg tgaaatatac gtaatgaatc acatgacaat
     1921 cttcaaattg aaaaatatac attctatgat gtaaggtcgc atttttaata tatttacgtt
     1981 ataatagttt gatgaatttt attgaggagt aagagttatg gcgattaaaa agttagtacc
     2041 agcatcgcat cctattttaa cgaaaaaagc gcaagcagtt aaaacatttg atgattcgtt
     2101 aaaaatatta ttacaagatt tagaagatac aatgtatgca caagaagctg ctggcttatg
     2161 tgcacctcaa attaatcagt cattgcaagt ggcaattatt gatatggaaa tggaaggatt
     2221 attacaactt gttaatccga aaattattag tcaatcaaat gaaacaataa cagacttaga
     2281 aggttcaatt acattgccag atgtttacgg cgaagtgaca agaagtaaaa tgatagttgt
     2341 cgaaagttat gacgtcaatg ggaacaaagt tgaactaact gcacatgaag atgtagcaag
     2401 aatgattttg catattatag atcaaatgaa cggtatccct tttacagaac gtgcggaccg
     2461 tattttaaca gataaagaag tggaggcata ttttataaat gactaaaata atatttatgg
     2521 gtacaccaga cttttcaaca actgttttag aaatgcttat tgcagaacat gatgtcattg
     2581 cagtcgtaac gcaaccagat cgacctgttg gacgtaaacg tgttatgaca ccaccaccag
     2641 ttaaaaaagt tgcaatgaaa tatgatttac ctgtatatca acctgaaaaa ttaagtggat
     2701 cagaagaatt agaacaattg cttcaattag atgtagattt aattgtaact gctgcttttg
     2761 gacaattatt acctgaatca ttgttggcat taccaaatct tggggcaatt aatgtacatg
     2821 catcattgtt accgaagtat agaggtggtg caccaattca tcaggcaatt atcgatggtg
     2881 aacaagaaac cggcataaca attatgtata tggttaaaaa attagatgcg ggtaatatta
     2941 tttcgcaaca agcaattaaa atagaagaaa atgataatgt cggtacgatg catgataaat
     3001 taagtgtatt aggggcatat ttattaaaag aaactttacc atctattata gagggcacaa
     3061 atgaaagcgt acctcaagat gatacgcaag caacatttgc ttccaatatt cgacgcgaag
     3121 atgagcgaat tagctggaat aaaccaggaa gacaagtgtt taatcaaatt cgtggattat
     3181 caccatggcc agttgcttat acaactatgg atgacactaa cttgaaaata tacgatgctg
     3241 aactcgttga gactaataag ataaacgagc ctggaaccat tatagaaacg actaaaaaag
     3301 ccattattgt tgctacaaat gataatgaag ctgttgcaat taaagatatg caattagctg
     3361 ggaaaaagag aatgttagct gccaattatt taagtggtgc gcaaaacaca ctagtaggga
     3421 agaaacttat atgatagaaa acgtgagaag tcttgctttt gacacgattc aagatatatt
     3481 aaatgaaggt gcgtatagta acttgcgtat caatgaagtg ttgtcagaaa atgaattaaa
     3541 tgcaatggat aaggctttat ttacagaaat tgtctacgga accgttaaaa gaaaatatac
     3601 gttagatttt tatttaaagc cttttgtgaa aacaaagatt aaggcatggg ttaggcaatt
     3661 attatggatg agtatttatc aatatgttta tttagataaa gttccaaatc atgccattat
     3721 taatgaagca gttgaaatag caaaagaacg cggtggctat cataatggta atgtcgtaaa
     3781 tggtatttta cgtacaatga tgcgtagtga cttacctgat tttaatgaaa ttgcagatcc
     3841 taaaaaaaga atggcaatcg agtatagtat gccgaagtgg attatagatc attgggcaac
     3901 acattatggt ctcgaagaaa ctgaaacaat tttacagtca tttttagaaa cgacatcaac
     3961 aactgtgcgt gccaacctga cgcgagcatc attagatgat attattgaaa agttgcaaga
     4021 cgaaggttat gacgttgaaa aagatcatga cttaccttat tgtctccata taggaggaca
     4081 accaattatt cattctcgtt catttaaaga tggattcgtt tcaattcaag ataaaagctc
     4141 aatgtttgtt gcacacatta tgaatgtaga ccgacatgat cacgtattag atgcatgtag
     4201 tgcacctggc ggtaaagctt gtcacattgc tgaagtttta atgccagaag ggcaagttga
     4261 cgcttcagat atacatgatc acaaaataga cttaattaat tttaatataa aaaaattacg
     4321 attaacaaat attaaagctt ttcaacatga tgcgacaaaa ccttatgata aaacatacga
     4381 taagatactt gttgatgcac catgtagcgg attaggtgta atgagacata agccggagat
     4441 taagtatact caaagcaaac aacatattga gtcactagtt gaattacagc ttgaaatatt
     4501 ggaaaatgta aaaaacaatg taaaaatagg tggcgaaatc atctattcaa catgtacaat
     4561 tgagcaacta gaaaatgaaa acgtgattta tacgtttttg aaaaataata aaaacttcga
     4621 atttgaaccg tttcaacatc cgataactgg agagttggtc aaaacgttac aaatcatgcc
     4681 gcaagacttt aattcagatg gattctttat cactaagata aaaagaaagg acaattagga
     4741 atgataactg ctgaaaagaa aaagaagaat aaatttcttc caaattttga caagcaatca
     4801 atatattcat tgcgatttga cgaaatgcaa aactggctcg ttgaacaagg gcaacaaaaa
     4861 tttcgagcga aacagatttt tgaatggtta tatcaaaaaa gagtagattc gattgatgaa
     4921 atgacgaact tatcgaaaga cttacgacag cttttaaaag ataactttac tgttacaact
     4981 ttaacaactg tagtaaaaca agaaagtaaa gacggtacaa ttaaattctt atttgaatta
     5041 caagatggct atacaattga aactgtttta atgagacatg attatggaaa ttcagtatgt
     5101 gtaacgacac aagtaggttg tcgcatcgga tgtacgtttt gtgcttctac acttggcggc
     5161 ttaaaaagaa accttgaagc tggcgaaatt gtttcacaag ttttaacagt tcaaaaagcc
     5221 cttgatgcta cagaagagcg cgtatctcaa attgtcataa tgggtatcgg tgaaccattt
     5281 gaaaattatg atgaaatgat ggacttttta agaatcgtca atgatgataa cagtttaaat
     5341 attggtgcac gtcacattac agtatcaaca tcaggtatca ttcctagaat atatgacttt
     5401 gcggatgaag atattcaaat taattttgct gtaagcttac acgccgcaaa agatgaagtg
     5461 cgatcacgct tgatgccaat taaccgtgca tataatgttg agaagttaat cgaagcaatt
     5521 caatattatc aagaaaaaac aaatcgtcgt gttacttttg aatatggtct gtttggtggt
     5581 gtgaatgacc aactagaaca tgcaagagaa ttagcacatt taataaaagg cttaaactgc
     5641 catgttaact taattcctgt caaccatgtt ccagaaagaa attatgtgaa aacggctaaa
     5701 aatgatatct ttaaatttga aaaagaatta aagagactag gaattaatgc cacaatacgt
     5761 cgtgaacaag gttcggatat tgacgcagct tgtggtcaat taagagcaaa ggaacgacaa
     5821 gtagaaacga ggtaaagaca aatgctagag gcacaatttt ttactgatac tggacaacat
     5881 agagataaga atgaagatgc gggtggtatt ttttataatc aaactaatca acaactttta
     5941 gttctgtgtg atggtatggg tggccataaa gcaggagaag ttgcaagtaa atttgttaca
     6001 gatgagttga aatcccgttt tgaagcggaa aatcttatag aacaacatca agctgaaaat
     6061 tggttgcgta ataatataaa agatataaat tttcagttat atcactatgc acaagaaaat
     6121 gcagaatata aaggtatggg tacaacatgt gtttgtgcac ttgtttttga aaaatcagtt
     6181 gtgatagcaa atgtcggtga ttctagagcc tatgttatta atagtcgaca aattgaacaa
     6241 attactagtg atcactcatt tgttaatcat cttgttttaa cgggtcaaat tacgccggaa
     6301 gaagcattta cacatccaca acgtaatatt attacgaagg tgatgggcac agataaacgt
     6361 gtgagtccag atttgtttat taagcgatta aatttttatg attatttatt attaaattca
     6421 gatggattaa ctgattatgt taaagacaat gaaattaagc gtttgttagt aaaagaaggt
     6481 acaatagaag atcatggtga tcaattaatg caattggcat tagataacca ttcgaaagat
     6541 aacgttactt tcatactcgc ggctattgaa ggtgataaag tatgataggt aaaataataa
     6601 atgaacgata taaaattgta gataagcttg gcggcggtgg catgagtacc gtttatcttg
     6661 ctgaagatac gatacttaac attaaagttg caattaaggc gatttttata ccacctagag
     6721 aaaaagaaga aacattaaaa cgttttgaac gagaagtaca taactcatca cagctatcac
     6781 atcaaaatat agtaagtatg atcgatgttg atgaagaaga tgactgttac tacttagtaa
     6841 tggaatatat cgaaggtccg actttgtctg agtatattga aagtcatggg ccattaagtg
     6901 ttgacacagc gattaatttt acgaatcaaa tattggatgg cattaaacat gcgcatgata
     6961 tgcgtattgt acatagagat attaagccac aaaatatatt aattgacagc aataaaacgt
     7021 tgaaaatatt tgattttgga attgctaaag ctttaagtga gacgtcttta actcagacta
     7081 atcatgtgtt aggtactgtg cagtactttt cgccagaaca agcaaaaggt gaggcaacgg
     7141 atgaatgtac agatatttat tctataggta ttgtgttata tgaaatgctt gttggtgaac
     7201 caccctttaa tggagaaact gcagttagca ttgcgattaa acatattcag gattctgtgc
     7261 caaatgtgac aacagatgta cgtaaggata ttccgcaatc tttaagtaat gtcattttac
     7321 gcgctacaga aaaagacaaa gcgaatcgtt acaaaacaat tcaagaaatg aaagatgatt
     7381 tgagtagtgt tttacatgaa aatcgagcga atgaagatgt ctatgaactc gataaaatga
     7441 aaacgatagc ggtacctttg aaaaaagaag atctagcaaa gcatattagt gaacataagt
     7501 cgaatcaacc taaacgtgaa acgacgcaag tacctattgt aaatgggcct gctcatcatc
     7561 agcaattcca aaagccagaa ggtacggtgt acgaaccaaa acctaaaaag aaatcaacac
     7621 gaaagattgt gctcttatca ctaatctttt cgttgttaat gattgcactt gtttcttttg
     7681 tggcaatggc aatgtttggt aataaatacg aagagacacc tgatgtaatc gggaaatctg
     7741 taaaagaagc agagcaaata ttcaataaaa acaacctgaa attgggtaaa atttctagaa
     7801 gttatagtga taaatatcct gaaaatgaaa ttattaagac aactcctaat actggtgaac
     7861 gtgttgaacg tggtgacagt gttgatgttg ttatatcaaa gggccctgaa aaggttaaaa
     7921 tgccaaatgt cattggttta cctaaggagg aagccttgca gaaattaaaa tcgttaggtc
     7981 ttaaagatgt tacgattgaa aaagtatata ataatcaagc gccaaaagga tacattgcaa
     8041 atcaaagtgt aaccgcaaat actgaaatcg ctattcatga ttctaatatt aaactatatg
     8101 aatctttagg cattaagcaa gtttatgtag aagactttga acataaatcc tttagcaaag
     8161 ctaaaaaagc cttagaagaa aaagggttta aagttgaaag taaggaagag tatagtgacg
     8221 atattgatga gggtgatgtg atttctcaat ctcctaaagg aaaatcagta gatgaggggt
     8281 caacgatttc atttgttgtt tctaaaggta aaaaaagtga ctcatcagat gtcaaaacga
     8341 caactgaatc ggtagatgta ccatacactg gtaaaaatga taagtcacaa aaagttaaag
     8401 tttatattaa agataaagat aatgacggtt caactgaaaa aggtagtttc gatattacta
     8461 gtgatcaacg tatagacatt cctttaagaa ttgaaaaagg aaaaacagca agttatattg
     8521 ttaaagttga cggtaaaact gtagctgaaa aagaagtcag ctatgatgat gtataaatat
     8581 aattgaagta aatgtaccga ggtttctatt tggaagtctc ggtattttta tgttgagatt
     8641 gcggtagttt taaaatgctt catgtcatca tatacaggtg agcattgtct atcaattctg
     8701 tatcactctc acaatattta tatcatttga aatgatcatt tatatattaa ttttccagtc
     8761 tttgatataa taaatgcagt aaaattaatc gagaggtgcc attttgaaga caggtcgaat
     8821 agtgaaatca attagtgggg tatatcaagt agacgttaat ggcgaacgtt tcaatacaaa
     8881 accacgagga ttatttagaa agaaaaaatt ttcaccggta gttggtgata tagtggaatt
     8941 tgaagttcaa aacattaacg aaggttatat tcatcaagtg tttgagcggg aaaatgagtt
     9001 gaaaagacca cctgtaagta atatagatac actagtaatt gtaatgagtg ctgtcgagcc
     9061 aaatttttca acgcaattat tagatcgatt tttagttatt gcacattcgt atcagttaaa
     9121 tgcgagaatt ttggtgacta aaaaagataa aacaccaatt gaaaagcagt tcgaaataaa
     9181 tgagttgttg aaaatatatg aaaatattgg ctatgagact gaatttattg gaaatgatga
     9241 tgatcgaaaa aaaattgtag aagcttggcc agctggactt atagtactta gtggtcaatc
     9301 aggtgtcggt aagtccactt tcttaaatca ttatcgtcca gaacttaatc ttgagacaaa
     9361 tgatatatca aaatcattaa atcgaggaaa gcatactaca agacatgtcg aactattcga
     9421 acgtcaaaac ggttatattg cagacacacc tggattcagt gctttagatt ttgatcatat
     9481 agataaagat gaaataaaag attattttct tgaattaaat cgatatggtg aaacatgtaa
     9541 gtttaggaat tgtaatcata tcaaagaacc taattgtaat gttaagcatc aattagagat
     9601 agggaatatt gcgcaattta gatacgacca ttatttacaa ctatttaatg aaatttcaaa
     9661 tagaaaggtt agatattaaa tgacaaaact atatccatca ttattatctg ttgatttttt
     9721 ggatttacaa catgaattaa aacgacttga agaagcaggc gtcgacggag ttcattttga
     9781 tgttatggat ggtcaatttg tgcctaatat atctattggt ttaccaatat tagatgcagt
     9841 aagaaaaggc acaacattac ctatagacgt acatttgatg attgaaaatc cagaaaagta
     9901 tattgcatca tttgcagaac atggtgccga tatgatttca attcatgtcg aatcaacgcc
     9961 tcatattcat cgtgctattc aaatgattaa acatttagat aaaaaagctg gtgtagtaat
    10021 taatcctggt acaccaatat cacaaattga acctatttta gacattgttg attatgtact
    10081 agtgatgaca gttaacccag ggtttggtgg tcaatcattt attgatcaat gcgtagaaaa
    10141 aatagcgggt cttaatgcta ttaaaatgga acgtcaatta aactttgata ttgaagttga
    10201 tggaggcgta aataccgata cagcgaaagt ttgtgttgaa aatggtgcta caatgctagt
    10261 aacaggttca tttttcttta aacaagagga ttataaaaaa gtcacacaag cattgaaagg
    10321 ttgagtgtat atgcatataa atttattatg ttctgatcga cacttgccgc aagatatttg
    10381 ggccaaaagt aatgaaggta aatggggcgg cgttgataga ggtgctttga ttttattgaa
    10441 gcatcaaatt atcccttttt tctcagtggg agactttgat tcagtcagta aagaagaacg
    10501 ccaacttcta acagaacagt tacaaatcaa accagttcaa gctgaaaaag ctgatacgga
    10561 tttagcttta gcggttgata aagctgttgc acttggattt gatagtatta caatttatgg
    10621 tgcaacaggc ggacgattag atcacttttt tggggcaatt cagttattat tgaaaaaagc
    10681 atattataaa catgatgttc atatagaagt tatcgatcaa caaaataaaa ttgaattatt
    10741 gcctaaaggt caacatacag ttgaaaaaga taagagttat ccgtacattt catttatacc
    10801 gatgactgat gatgtagaac tttctctagc aggttttaaa tataatttag ctagacaaat
    10861 gcttaatata ggttctactt taactatttc aaatgaaatt gagtctttgc aagcgaaagt
    10921 aactgtacat gatgggt
//
LOCUS       DALPQQ010000088        10656 bp    DNA     linear   BCT 22-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus strain K18-6-464
            SAMD00233528-rid16434743.denovo.088, whole genome shotgun sequence.
ACCESSION   DALPQQ010000088 DALPQQ010000000
VERSION     DALPQQ010000088.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMD00233528
            Sequence Read Archive: DRR236061
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 10656)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10656)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001543423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001543423.1
            Genome Coverage       :: 77x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/22/2022 17:09:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,811
            CDSs (total)                      :: 2,743
            Genes (coding)                    :: 2,689
            CDSs (with protein)               :: 2,689
            Genes (RNA)                       :: 68
            rRNAs                             :: 2, 4, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 4, 2 (16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 54
            CDSs (without protein)            :: 54
            Pseudo Genes (ambiguous residues) :: 0 of 54
            Pseudo Genes (frameshifted)       :: 27 of 54
            Pseudo Genes (incomplete)         :: 27 of 54
            Pseudo Genes (internal stop)      :: 10 of 54
            Pseudo Genes (multiple problems)  :: 10 of 54
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10656
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMD00233528-rid16434743.denovo.088"
                     /strain="K18-6-464"
                     /db_xref="taxon:1280"
                     /geo_loc_name="Japan: Niigata"
     gene            complement(612..809)
                     /locus_tag="O7798_001874"
     CDS             complement(612..809)
                     /locus_tag="O7798_001874"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499819.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDC2864131.1"
                     /translation="MNCYDEIFNTIKELIENKEISSYQINKDTGISYGNINAMRRRER
                     RIENLSLKNAKILYEYAKKVL"
     gene            complement(1302..2642)
                     /gene="glnA"
                     /locus_tag="O7798_001875"
     CDS             complement(1302..2642)
                     /gene="glnA"
                     /locus_tag="O7798_001875"
                     /EC_number="6.3.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499818.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I glutamate--ammonia ligase"
                     /protein_id="HDC2864132.1"
                     /translation="MPKRTFTKDDIRKFAEEENVRYLRLQFTDILGTIKNVEVPVSQL
                     EKVLDNEMMFDGSSIEGFVRIEESDMYLHPDLDTWVIFPWTAGQGKVARLICDVYKTD
                     GTPFEGDPRANLKRVLKEMEDLGFTDFNLGPEPEFFLFKLDEKGEPTLELNDDGGYFD
                     LAPTDLGENCRRDIVLELEDMGFDIEASHHEVAPGQHEIDFKYADAVTACDNIQTFKL
                     VVKTIARKHNLHATFMPKPLFGVNGSGMHFNVSLFKGKENAFFDPNTEMGLTETAYQF
                     TAGVLKNARGFTAVCNPLVNSYKRLVPGYEAPCYIAWSGKNRSPLIRVPSSRGLSTRI
                     EVRSVDPAANPYMALAAILEAGLDGIKNKLKVPEPVNQNIYEMNREEREAVGIQDLPS
                     TLYTALKAMRENEVIKKALGNHIYNQFINSKSIEWDYYRTQVSEWERDQYMKQY"
     gene            complement(2661..3029)
                     /locus_tag="O7798_001876"
     CDS             complement(2661..3029)
                     /locus_tag="O7798_001876"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499817.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MerR family transcriptional regulator"
                     /protein_id="HDC2864133.1"
                     /translation="MISNDAIRRNMAVFSMSVVSKLTDLTPRQIRYYETHELIKPERT
                     EGQKRLFSLNDLERLLEIKSLLEKGFNIKGIKQIIYDSQEHLTTDEQEIRKKMIVDAT
                     QKPIGETLPINRGDLSRFIK"
     gene            complement(3272..4510)
                     /locus_tag="O7798_001877"
     CDS             complement(3272..4510)
                     /locus_tag="O7798_001877"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499816.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class I/II-fold pyridoxal
                     phosphate-dependent enzyme"
                     /protein_id="HDC2864134.1"
                     /translation="MKDISKIVADVESTLAPYFKEIEETAYINQEKVLNAFHHVKATE
                     SDLQGSTGYGYDDFGRDHLEEIYAQAFKAEDAIVRPQIISGTHAITIALQSLLKHGDE
                     LIYITGSPYDTLLEVIGVNGNGIESLMEHGVSYKDIALKEGKIDIESVLDGVSERTKV
                     IAIQRSKGYDQRPSIPLDEIEKVITRLKNVHPNILIFVDNCYGEFVERREPIECGADL
                     IAGSLIKNPGGGLAKIGGYIAGRKDLIERCGYRLTAPGIGKEAGASLNALLEMYQGFF
                     LAPHVVSQSLKGALFTSLFLEKMNMNTTPKYYEKRTDLIQTVKFETKEQMISFCQSIQ
                     HASPINAHFSPEPSYMPGYEDDVIMAAGTFIQGSSIELSADGPIRPPYEAYVQGGLTY
                     EHVKIAVTRAVNQLKEQGLI"
     gene            complement(4529..5767)
                     /gene="hflX"
                     /locus_tag="O7798_001878"
     CDS             complement(4529..5767)
                     /gene="hflX"
                     /locus_tag="O7798_001878"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499815.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GTPase HflX"
                     /protein_id="HDC2864135.1"
                     /translation="MAQQQIHDTKNKLEKAVLVGVHAQDDKQFNFESTMEELSSLSET
                     CQLEVLGQITQNRDRVDRKYYVGKGKIEEIQAFIEFKDIDVVITNDELTTAQSKSLNE
                     ALGVKIIDRTQLILEIFALRARSKEGKLQVELAQLDYLLPRLQGHGKSLSRLGGGIGT
                     RGPGETKLEMDRRHIRTRMNEIKHQLRTVEEHRERYRNKRNQNQVFQVALVGYTNAGK
                     SSWFNVLANEETYEKDQLFATLDPKTRQIQINDGFNLIISDTVGFIQKLPTTLIAAFK
                     STLEEAKGADLLVHVVDSSHPEYRTQYDTVNDLIKQLDMSHISQIVIFNKKDLCDHAS
                     NRPASDLPNVFVSSKNDGDKLLVKTLFIDEIKRQLTYYDETIATNNADRLYFLKQHTL
                     VTELKYDEIENVYRIKGFKK"
     gene            5879..6355
                     /locus_tag="O7798_001879"
     CDS             5879..6355
                     /locus_tag="O7798_001879"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499814.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione peroxidase"
                     /protein_id="HDC2864136.1"
                     /translation="METIYDFVVETNKGVTYKLDAYKGDVMLIVNTASECGFTSQFEG
                     LQSLYEKYKDQGFVILGFPCNQFGGQEPGSGEEAAQNCKLNYGVTFPMHQKIDVKGEH
                     QLPLFRYLTAAQHGFFNEKIKWNFTKFLVDREGNVVKRFAPQKKPVQIEREIEKLL"
     gene            complement(6577..6810)
                     /gene="hfq"
                     /locus_tag="O7798_001880"
     CDS             complement(6577..6810)
                     /gene="hfq"
                     /locus_tag="O7798_001880"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499813.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA chaperone Hfq"
                     /protein_id="HDC2864137.1"
                     /translation="MIANENIQDKALENFKANQTEVTVFFLNGFQMKGVIEEYDKYVV
                     SLNSQGKQHLIYKHAISTYTVETEGQASTESEE"
     gene            complement(6825..7760)
                     /gene="miaA"
                     /locus_tag="O7798_001881"
     CDS             complement(6825..7760)
                     /gene="miaA"
                     /locus_tag="O7798_001881"
                     /EC_number="2.5.1.75"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499812.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA (adenosine(37)-N6)-dimethylallyltransferase
                     MiaA"
                     /protein_id="HDC2864138.1"
                     /translation="MNKNKPFIVVIVGPTASGKTELSIELAKRINGEIISGDSMQVYK
                     HMNIGTAKVTPEEMDGIPHHLIDILNPDDTFSAYEFKRLAEDLITDITNRGKVPIIAG
                     GTGLYIQSLIYNYELEDETVTPAQLSIVKQKLSALEHLDNQQLHDYLAQFDAVSAENI
                     HPNNRQRVLRAIEYYLKTKKLLSNRKKVQQFTENYDTLLLGIEMSRKTLYSRINKRVD
                     IMLDHGLFREVQQLVEQGYESCQSMQAIGYKELIPVINGQMIYEDAVNDLKQHSRQYA
                     KRQMTWFKNKMSVHWLDKENMSLQMMLDEITTQIK"
     gene            complement(7778..8692)
                     /locus_tag="O7798_001882"
     CDS             complement(7778..8692)
                     /locus_tag="O7798_001882"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499811.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HDC2864139.1"
                     /translation="MTEKQFKLTVQDNTNIEVKVNFTDVDSKGIIHIFHGMAEHMERY
                     DKLAHALSKHGFDVIRHNHRGHGINIDESTRGHYDDMKRVIGDAFEVAQTVRGNVDKP
                     YIIIGHSMGSVIARLFVETYPQYVDGLILSGTGMYSLWKGLPTVKVLQLITKIYGAEK
                     RVEWVNQLVSNSFNKKIRPLRTQSDWISSNPIEVDNFIKDPYSGFNVSNQLLYQTAYY
                     MLHTSQLKNMKMLNHAMPILLVSGYDDPLGDYGKGILKLANIYRKAGIKNVKVNLYHH
                     KRHEVLFEKDHDKIWEDLFKWLNQFYKK"
     gene            complement(8842..10515)
                     /locus_tag="O7798_001883"
     CDS             complement(8842..10515)
                     /locus_tag="O7798_001883"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499810.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycerol-3-phosphate dehydrogenase/oxidase"
                     /protein_id="HDC2864140.1"
                     /translation="MALSTFKREHIKKNLRNDEYDLVIIGGGITGAGIALDASERGMK
                     VALVEMQDFAQGTSSRSTKLVHGGLRYLKQFQIGVVAETGKERAIVYENGPHVTTPEW
                     MLLPMHKGGTFGKFSTSIGLGMYDRLAGVKKSERKKMLSKKETLAKEPLVKKEGLKGG
                     GYYVEYRTDDARLTIEVMKRAAEKGAEIINYTKSEHFTYDKNQQVNGVKVIDKLTNEN
                     YTIKAKKVVNAAGPWVDDVRSGDYARNNKKLRLTKGVHVVIDQSKFPLGQAVYFDTEK
                     DGRMIFAIPREGKAYVGTTDTFYDNIKSSPLTTQEDRDYLIDAINYMFPSVNVTDEDI
                     ESTWAGIRPLIYEEGKDPSEISRKDEIWEGKSGLLTIAGGKLTGYRHMAQDIVDLVSK
                     RLKKDYGLTFSPCNTKGLAISGGDVGGSKNFDAFVEQKVDVAKGFGIDEDVARRLASK
                     YGSNVDELFNIAQTSQYHDSKLPLEIYVELVYSIQQEMVYKPNDFLVRRSGKMYFNIK
                     DVLDYKDAVIDIMADMLDYSPAQIEAYTEEVEQAIKEAQHGNNQPAVKE"
BASE COUNT         3280 a         1996 c         1449 g         3931 t
ORIGIN      
        1 taattttttc cttaattctc ttgtcataaa taccacctcc ctatttaatg tggtaaaggt
       61 cttttgccct ttaccttttt aaaagaacga tttgataaaa ttaagtactt gaattattaa
      121 gctcgtcaca gctattcgaa atttaatttt gctattcgtt ctttttcttt aaccattctt
      181 atcatttttt ctcctttcct ctttatagtt atttaacatt ccacaaattg gggtaagtga
      241 catgttgaac tcccatatcc actggcaaga tttataattt gtaattctaa agtataatag
      301 cctatatttt tcaaaatctc tttttttatg attaacatcc ctctaagtgc acctaaaggt
      361 ttttatgtaa tgtattaaat atttccattt atacatatac atcttgtata aaaagaaaga
      421 actccatata tactcaaaag gtatactgaa gctctatata ttatataaaa ttattatact
      481 attttgaaaa acataagtaa atcactaaac atgatttctt tcacttttag aaaactttta
      541 atactataaa agcacccact cagtcactag tttgggcagt tattgtatgc ctattgaact
      601 caatgcttat attacaatac ctttttcgca tattcatata agatctttgc attctttaag
      661 cttaaatttt ctattcttct ttctctacgg cgcatagcat taatattacc gtaacttatc
      721 ccagtatctt tattaatttg ataactcgat atctctttgt tttctatcaa ttctttgatt
      781 gtattgaata tttcatcata gcaattcata aattagatga ggcgaaattt ttaatttttt
      841 agaatatcaa tagtagtata actaaaatga aaataccgat cgataaacaa aaagatattt
      901 tttgttttgt ttctcttttc atatagtatt acccccttaa taatgcgtag taaggtccct
      961 cttttcgggg tcttacctta gaacgttctg caaatgaatt cgatgagaag taatatgaat
     1021 atggctattt tcaagtaata ctcaacgttt tcgcgacgtt cttttatcgc ctcatctcat
     1081 cacctccaaa tatattaaaa ttcatgtgaa ccaaaatata aaatggtctt ccccagcttt
     1141 aaaaaaataa atacataaaa catttacttg accaaaactt gaccaaatcc attttttaac
     1201 aaaagtggtc aagtgaaatc ccatctttcc aaatcaaaaa agagctaaag caaaatgctc
     1261 tagcccttga tattactgat ttcccatcat tgtttagcgt attaatattg cttcatgtac
     1321 tgatctcttt cccattcaga gacttgagtt ctgtagtaat cccattcaat tgattttgaa
     1381 ttaataaatt gattatagat atgatttcct aaagcttttt taataacttc attttcacgc
     1441 attgctttta atgcagtata aagtgttgaa ggtaagtctt gaatgcctac tgcttcacgt
     1501 tcttcacggt tcatttcgta aatattttgg ttaactggtt ctggaacttt taatttattt
     1561 ttaataccat ctagtccagc ttctaagatt gcagctaacg ccatgtatgg gtttgcagct
     1621 ggatctactg aacgtacttc gatacgagta gataatcctc ttgaagatgg tacacggatt
     1681 aatggtgaac ggtttttacc actccatgca atataacatg gtgcttcata accaggtact
     1741 aaacgtttat atgagtttac taacgggtta catacagcag taaatccgcg tgcattttta
     1801 agcacacctg ctgtaaattg atatgcagtt tccgttaagc ccatttcagt atttggatca
     1861 aagaatgcat tttctttacc tttgaataat gaaacgttaa agtgcatacc gctaccattc
     1921 acaccgaata atggtttagg cataaatgtt gcgtgtaaat tatgtttacg tgcgattgtt
     1981 ttaacaacca atttaaatgt ttggatatta tcacatgctg taacagcatc tgcatattta
     2041 aagtcaattt catgttgacc aggggcaact tcatggtgac tagcttcaat atcgaagccc
     2101 atatcctcta attctaaaac aatatcacga cgacagtttt cacctaaatc tgtaggtgct
     2161 aaatcgaaat atccaccatc atcattaagt tctaaagttg gttccccttt ttcatccaac
     2221 ttaaacaaga agaattctgg ttcaggccct aggttaaagt ctgtgaagcc taaatcttcc
     2281 atttctttta atacacgttt taagtttgca cgaggatccc cttcaaatgg tgttccatct
     2341 gttttatata catcacaaat taaacgtgca actttacctt gtccagcagt ccatgggaag
     2401 attacccaag tatctaaatc tggatgtaag tacatatctg attcttcgat acgtacgaaa
     2461 ccttcgatag aagaaccgtc aaacatcatt tcgttatcaa gtactttttc taattggctt
     2521 acaggcactt caacattttt aattgttcct aaaatatcag tgaattgtaa tcttaaatat
     2581 cttacatttt cctcttctgc aaatttacga atgtcgtctt tagtgaaagt acgttttggc
     2641 attttaaaat cctccaaatt ttatttaata aatcgggata aatcaccacg atttattggc
     2701 aaagtttctc caataggctt ttgcgtggca tctacaatca tcttttttct tatctcttgt
     2761 tcatctgttg ttaaatgctc ttgtgagtca taaatgattt gtttaatccc tttgatatta
     2821 aatccttttt ctaataatga tttaatttct agtaatcttt ccaaatcatt gagtgagaac
     2881 agacgttttt gaccttctgt tctttcaggt ttgatgagtt catgtgtttc atagtaacgt
     2941 atttgccttg gcgttaaatc cgttaactta cttactacac tcatagagaa gacagccata
     3001 tttcgtctga ttgcatcatt cgatatcatt gttcctctcc tctacttttg aacttgttaa
     3061 taacttatca taattttttt aggatttcaa aaatatgtca ggttttctaa cataaagctt
     3121 aaaacattga tataactgcg atttcgactt ctaaaacgac ataaaacaat ctacagctaa
     3181 aatatttttt caatttttaa aaataatctg ataaatctcc gcaaaaaatt tcacccaaaa
     3241 cacattatca tttagggtga aatttaatct attatataag tccttgttct ttcaactgat
     3301 taacagctct tgtcacagca attttaacgt gttcatatgt taatcctcct tgaacatatg
     3361 cttcataagg aggacgaata ggtccatctg cagataattc aatcgatgaa ccttgaataa
     3421 acgtaccagc tgccataata acatcatctt cgtaaccagg catataacta ggttctggac
     3481 taaaatgtgc attaattggg gatgcgtgtt gaatactttg acaaaatgaa atcatttgtt
     3541 ctttcgtttc aaatttaact gtttgaatta aatcagttcg tttttcgtag tacttcggcg
     3601 ttgtgttcat attcattttt tctaaaaata aactagtaaa caatgcacct ttaagactct
     3661 gactgacaac gtgtggtgct aaaaagaaac cttgatacat ttcaagcaat gcatttaatg
     3721 atgcacccgc ttctttacca ataccaggtg ctgtcaatct ataaccacat cgttcaatta
     3781 aatcttttct accagcaatg tatccaccaa tcttagctaa accaccgcca gggtttttaa
     3841 ttaatgatcc tgctattaaa tcggcaccac attctatagg ttcacgtctt tcaacaaatt
     3901 ccccataaca gttatccaca aatattaaaa tattaggatg cacgtttttc aacctagtaa
     3961 ttaccttttc aatttcatct agcggaattg aaggtctttg atcatagcct ttcgaacgtt
     4021 gaatcgctat tactttggtg cgctcagaaa ccccatctaa cacactttca atatcgatct
     4081 taccttcttt aagtgcaata tctttatacg atacgccatg ctccattaaa ctttcaatac
     4141 catttccgtt tacgccaatg acttcaagta aagtgtcata tggactaccc gttatataaa
     4201 ttaattcatc accatgtttt aataaacttt gtaatgcaat agtaatcgca tgcgtacctg
     4261 aaataatttg cggacgaaca attgcatctt ctgctttaaa tgcctgcgca tatatttctt
     4321 ctaaatgatc acgtccaaag tcatcatacc cgtatcctgt tgatccttgt agatcacttt
     4381 cggttgcttt gacatgatga aatgcattta atactttttc ttgattaata tatgctgttt
     4441 cttcaatttc tttaaaatat ggtgctaacg ttgattcgac gtcagctact atcttactta
     4501 tatctttcat ttgaatttcg tccttttatt attttttaaa tccttttata cgataaacat
     4561 tttcaatttc atcatattta agttcagtca ctaatgtatg ttgttttaga aaatataatc
     4621 gatctgcatt attcgtcgca attgtctcat cataataagt taattgcctt ttgatttcat
     4681 caataaataa cgtcttaaca agtaatttat caccatcatt tttagaagaa acaaaaacat
     4741 taggcaaatc acttgctgga cgatttgatg catgatcaca taagtccttt ttattaaaaa
     4801 taactatttg agaaatatga ctcatatcta attgtttgat taaatcatta actgtgtcat
     4861 actgcgtacg gtattcagga tggctactat ctacgacatg tactaataaa tctgcacctt
     4921 tagcctcttc taaagttgat ttaaaagctg caattaacgt cgtaggtagt ttctgtataa
     4981 aaccaacagt atctgaaata attaaattaa atccatcatt tatttgaatt tgtcgtgttt
     5041 taggatctaa cgttgcaaat aattgatctt tttcatacgt ctcttcattt gctaaaacat
     5101 taaaccatga tgatttacca gcatttgtat aaccaactaa agctacttga aacacctgat
     5161 tttgatttct tttatttcga tatctttcgc gatgttcttc taccgtccgc aattgatgtt
     5221 taatttcatt catacgagtt cgaatatgtc tgcgatccat ctctaacttc gtttcaccag
     5281 ggcctctagt tccaataccg ccacctaaac gagaaaggct tttaccatgg ccttgcaatc
     5341 taggtaataa ataatcaagt tgtgctagct ctacttgcaa tttaccttct ttacttcttg
     5401 ctcttaatgc aaatatttca agaatcaact gagttctatc aataattttt acacctaaag
     5461 cttcatttag tgatttggat tgtgcagtcg ttaattcatc atttgtgatg actacatcaa
     5521 tatctttgaa ctcaataaat gcttgaattt cttcaatttt acctttacca acataatatt
     5581 tgcgatctac acgatctctg ttttgagtaa tttgacccaa cacttcaagt tggcaagtct
     5641 ctgataaaga tgataattcc tccattgtag actcaaaatt aaattgctta tcatcttgag
     5701 catgtacacc gactaagaca gctttttcta gtttattttt agtatcatga atttgttgct
     5761 gagccatgtt atacatctcc ttaataaaat cctactcaaa gtattctatc atagagtttt
     5821 agtaaagact attacacgat tttgtggtac attttaagta aatcgaaagg atgatacaat
     5881 ggagacaatt tatgattttg tagtagaaac aaataaaggt gttacttaca aattagatgc
     5941 atataagggt gacgttatgc taattgttaa tacagctagc gaatgtggct ttacttcaca
     6001 atttgaaggt ttgcaatcat tatacgagaa atacaaagat caagggtttg taattctagg
     6061 tttcccttgt aatcaatttg gtggccaaga acctggttca ggcgaagaag cagctcaaaa
     6121 ctgtaaatta aactatggtg ttaccttccc tatgcatcaa aaaatagacg taaaagggga
     6181 acatcaatta cctttattta gatatttgac tgcggcacaa cacggattct ttaatgagaa
     6241 aatcaaatgg aatttcacta agtttttagt ggatcgcgaa ggtaacgttg ttaaacgatt
     6301 tgcacctcaa aaaaaacctg ttcaaatcga aagagaaata gaaaaattat tataaaatat
     6361 actagctcat agcaaataaa acgcttcata taaagtcgta tcatatattg actcgacctt
     6421 tatatgaagc gtttttatta caaacattcc tctattgtat cttgtcattt gaacatcatt
     6481 taattgatgt cacatatgac tttatttcta tatctattta tcatacttca aacgttatgt
     6541 acacgagtca ttaaatcgtg cccatatgat tacaacttat tcttcacttt cagtagatgc
     6601 ttgaccttca gtttctactg tataagtgct gatcgcatgt ttgtaaatca agtgttgttt
     6661 gccttgagaa tttaagctta cgacatactt gtcgtattct tcaataacac ctttcatttg
     6721 gaaaccgttt agaaagaata cagttacttc agtttggttt gctttaaaat tctctagtgc
     6781 tttgtcttgg atgttttcgt ttgcaatcat ctgtcggact ccttttactt aatctgggtt
     6841 gtaatctcat ctaacatcat ttgaagtgac atattttctt tatctaacca atgaacactc
     6901 attttattct tgaaccatgt catttgtcgt tttgcatatt ggcgtgaatg ttgctttaaa
     6961 tcattgacag catcttcata aatcatttgt ccgttaatca caggtattaa ttctttatat
     7021 ccaatagctt gcatactttg gcaagattca tagccttgtt caacaagttg ttgcacttct
     7081 ctaaataatc cgtgatccaa cataatatca acacgtttat ttattcttga atataatgtt
     7141 ttacgcgaca tttcaatccc taataataat gtatcataat tttcagtaaa ttgttgcact
     7201 ttcttgcgat tactcaaaag tttttttgtt tttaaataat attcaatagc gcgcaacact
     7261 ctttggcggt tgttagggtg aatattttct gcagaaaccg catcaaattg agctaaataa
     7321 tcgtgtagtt gctgattatc taaatgttct aatgcagata acttttgttt aactatggat
     7381 aattgtgcag gtgtaactgt ttcatcttct aattcataat tatatattaa tgattgaata
     7441 tataagcctg ttccacctgc tatgattgga actttacctc tattcgttat atcagtaatt
     7501 aaatcttctg ctaatcgctt gaattcatat gctgaaaatg tatcatcagg attcaagata
     7561 tcaattaaat gatgtggaat accatccatt tcttcaggtg ttacttttgc agttccaata
     7621 ttcatatgtt tgtagacttg catagagtca ccgcttatga tttcaccatt gatacgcttc
     7681 gcgagttcga tgctaagctc tgttttacct gaagcagttg gccccacaat tactacaata
     7741 aaaggcttat ttttattcat atttaattcc actttcttta ttttttataa aattgattca
     7801 accatttaaa caagtcttcc caaattttgt catgatcttt ttcaaataac acttcatgac
     7861 gtttatgatg ataaagattc actttaacat ttttaatgcc agcttttcta tatatattcg
     7921 ccaattttaa aatcccttta ccataatcac ctaaaggatc gtcatatcct gaaactaata
     7981 atataggcat ggcatgattt aacattttca tattttttaa ttgtgatgta tgtagcatat
     8041 aataggctgt ttgatataat aattgatttg acacattaaa tccactatat ggatctttaa
     8101 taaagttatc tacttcaatt ggattactag aaatccaatc actttgtgta cgtaatggac
     8161 gtattttttt attaaaacta tttgatacta actggttaac ccattcaact cgtttctcag
     8221 caccataaat ttttgtaatc agttgtaaca ctttaacggt tggtaaacct ttccataatg
     8281 aatacatacc agtaccactt aaaattagac catcaacata ttgcggatat gtttctacaa
     8341 acaatctagc tataacggat cccattgaat gtccgattat aatgtatggt ttatcaacat
     8401 tgcctctcac tgtttgcgct acttcaaagg catcaccgat aactcgtttc atatcatcgt
     8461 aatgccctct tgttgattca tcaatattaa taccatgtcc tcgatgatta tgacgtatca
     8521 catcgaagcc atgctttgaa agtgcatgtg ctaatttatc gtaacgttcc atatgttcag
     8581 ccataccatg aaatatatga ataattcctt ttgaatctac atctgtaaaa ttcactttaa
     8641 cttcaatatt cgtattatct tgtacagtta atttaaattg tttttcagtc atcatctcac
     8701 acctttaata acaacgcttt tatattcgct tttattatta tcatacattt agtgatgcat
     8761 agtttcaatt gactaatgta tctcgtataa aaaaactgat gcccttaaaa caggacacca
     8821 gtttatgatt gtacaaatta attattcttt aactgctggt tgattatttc catgttgcgc
     8881 ttctttaatt gcttgctcaa cttcttcagt atatgcttca atttgagctg gagagtaatc
     8941 aagcatatct gccataatat cgatgacagc atctttataa tctaatacat ctttaatatt
     9001 gaaatacatt ttaccagaac gacgaactaa gaaatcgtta ggtttgtata ccatttcttg
     9061 ttgaatacta taaacaagtt ctacataaat ttctaatggt aacttgctat catggtattg
     9121 agatgtttgc gcaatgttga acaattcatc aacatttgaa ccatatttag atgctaaacg
     9181 tcttgcaaca tcttcatcaa tgccgaatcc tttagctaca tctacttttt gctctacaaa
     9241 cgcatcaaag ttcttgctac cacctacatc gccacctgaa attgccagac cttttgtatt
     9301 acatggacta aatgttaaac cgtagtcttt tttcaagcgt ttagatacta aatcaacaat
     9361 gtcttgagcc atgtgacgat agcctgttaa tttaccacct gcaatagtta ataaacctga
     9421 tttaccttcc caaatttcat ccttacgaga gatttcagaa gggtctttgc cttcttcgta
     9481 aattaatggt ctaattcctg cccatgttga ttcaatatct tcatctgtaa cattaacact
     9541 agggaacatg taattaatcg catcgattaa atagtctctg tcttcttgtg tagttaatgg
     9601 tgaagatttg atattgtcat agaatgtatc tgtagtacct acatacgctt ttccttcacg
     9661 tggaattgca aaaatcattc ttccatcttt ttcagtatca aagtatactg cttgacctaa
     9721 tgggaatttt gattgatcaa taacaacatg tacaccttta gttaaacgta attttttatt
     9781 attgcgtgca taatcaccac ttctaacatc atcaacccat ggacctgctg cattaaccac
     9841 ttttttagcc ttaattgtat aattttcatt agttaattta tctataactt taacaccatt
     9901 tacttgttga tttttatcat aagtgaagtg ttcagattta gtatagttga taatttctgc
     9961 gcctttttca gcagcacgct tcataacttc aatagttaaa cgcgcatcgt cagtacgata
    10021 ttcaacatag taaccgccgc cttttagacc ttctttttta actaatggtt ctttagctaa
    10081 agtttctttt ttagataaca tttttttacg ttcagacttc ttaacacctg ctaaacgatc
    10141 atacattcct aaaccaattg atgttgagaa tttaccaaat gttccacctt tatgcattgg
    10201 taaaagcatc cactctggag tcgtaacatg aggcccattt tcataaacaa tcgcacgttc
    10261 tttaccagtt tcggcaacta ctccaatttg gaattgtttt aagtaacgca aaccaccatg
    10321 gactaatttt gtagatcttg agcttgttcc ttgtgcaaag tcttgcattt caactaatgc
    10381 aactttcatt cctctttcac tcgcgtctag tgcaatacct gcacctgtaa taccgccacc
    10441 aataattact aaatcatatt catcatttct taaattcttt ttaatatgtt ctctcttaaa
    10501 agtagacaat gccattccaa aacgcctcct aaaaaatgta aaaacgagag acttgtccca
    10561 cataaacaat ccttcaattg tacatgttcg aacaaatctc tcgcttctcg attcaaatat
    10621 taacttaaat tgattgtatc acaatgttta tacaaa
//
LOCUS       DALPQQ010000089        10584 bp    DNA     linear   BCT 22-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus strain K18-6-464
            SAMD00233528-rid16434743.denovo.089, whole genome shotgun sequence.
ACCESSION   DALPQQ010000089 DALPQQ010000000
VERSION     DALPQQ010000089.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMD00233528
            Sequence Read Archive: DRR236061
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 10584)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10584)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001543423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001543423.1
            Genome Coverage       :: 77x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/22/2022 17:09:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,811
            CDSs (total)                      :: 2,743
            Genes (coding)                    :: 2,689
            CDSs (with protein)               :: 2,689
            Genes (RNA)                       :: 68
            rRNAs                             :: 2, 4, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 4, 2 (16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 54
            CDSs (without protein)            :: 54
            Pseudo Genes (ambiguous residues) :: 0 of 54
            Pseudo Genes (frameshifted)       :: 27 of 54
            Pseudo Genes (incomplete)         :: 27 of 54
            Pseudo Genes (internal stop)      :: 10 of 54
            Pseudo Genes (multiple problems)  :: 10 of 54
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10584
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMD00233528-rid16434743.denovo.089"
                     /strain="K18-6-464"
                     /db_xref="taxon:1280"
                     /geo_loc_name="Japan: Niigata"
     gene            complement(85..891)
                     /gene="yjbH"
                     /locus_tag="O7798_001884"
     CDS             complement(85..891)
                     /gene="yjbH"
                     /locus_tag="O7798_001884"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499491.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protease adaptor protein YjbH"
                     /protein_id="HDC2864141.1"
                     /translation="MAGELRIMENKSREDINLSPVSKIEIYSFFDPFSSDCFKLSAIL
                     SKLRIEYNQYIRIRHILNPSLKVLTKCQAQSTSNFDNIALAYKAAELQGRVRAERFIH
                     LMQNEIIPKRDIITESMICDCIQNAGIDLEVFKDDLQKSKLTESLKIDLHIAREMEIE
                     QAPSLVFFSEDVHEEGLKVEGLYPYHIYTYIINELMGKPIEKNLPPKLETYIQQQQLV
                     TMEELLTIYEWPEKLLNKELKKLAIQQKIEKLKYPDGDFWKSKMPKIKSK"
     gene            complement(914..1279)
                     /locus_tag="O7798_001885"
     CDS             complement(914..1279)
                     /locus_tag="O7798_001885"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000214067.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="truncated hemoglobin"
                     /protein_id="HDC2864142.1"
                     /translation="MTTTPYDIIGKEALYDMIDYFYTLVEKDERLNHLFPGDFAETSR
                     KQKQFLTQFLGGPNIYTEEHGHPMLRKRHIDFTITEFERDAWLENMQTAINRAAFPQG
                     VGDYLFERLRLTANHMVNS"
     gene            complement(1383..1976)
                     /locus_tag="O7798_001886"
     CDS             complement(1383..1976)
                     /locus_tag="O7798_001886"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499493.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CYTH domain-containing protein"
                     /protein_id="HDC2864143.1"
                     /translation="MATNHEIEFKQMITASIYNKLQEKYFKDSVLFKQVNYYIDTPDF
                     KLKEHRSALRIRVKDNQYEMTLKTPAKVGLLEYNYIVDIKPEMNLIISNDNLPDDIRQ
                     IIVEQFGVKDTTLSILGALTTYRQETKYKGDLLVLDKSEYFDTTDYELEFEVKDYNQG
                     LQKFQSLLNELNLEHHQPLNKVQRFFKKKETLSNNIN"
     gene            2162..2509
                     /locus_tag="O7798_001887"
     CDS             2162..2509
                     /locus_tag="O7798_001887"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499494.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDC2864144.1"
                     /translation="MRLYINEIKIKDDILYCYTEDSIKGLSEVGQMLVDSDNYAFAYT
                     LDDGKAYAYLIFVQETWTMLHEKMTKKIIINDELELTEFHQELTYILDNIKGNNNYGK
                     EFVATVEETFDIE"
     gene            2526..3161
                     /locus_tag="O7798_001888"
     CDS             2526..3161
                     /locus_tag="O7798_001888"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499495.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GTP pyrophosphokinase family protein"
                     /protein_id="HDC2864145.1"
                     /translation="MNQWDQFLTPYKQAVDELKVKLKGMRKQYEVGEQASPIEFVTGR
                     VKPIASIIDKANKRQIPFDRLREEMYDIAGLRMMCQFVEDIDVVVNILRQRKDFKVIE
                     ERDYIRNTKESGYRSYHVIIEYPIETLQGQKFILAEIQIRTLAMNFWATIEHTLRYKY
                     DGAYPDEIQHRLERAAEAAYLLDEEMSEIKDEIQEAQKYYTQKRSKKHEND"
     gene            3178..3987
                     /locus_tag="O7798_001889"
     CDS             3178..3987
                     /locus_tag="O7798_001889"
                     /EC_number="2.7.1.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499496.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD kinase"
                     /protein_id="HDC2864146.1"
                     /translation="MRYTILTKGDSKSNALKHKMMNYMKDFRMIEDSENPEIVISVGG
                     DGTLLQAFHQYSHMLSKVAFVGVHTGHLGFYADWLPHEVEKLIIEINNSEFQVIEYPL
                     LEIIMRYNDNGYETRYLALNEATMKTENGSTLVVDVNLRGKHFERFRGDGLCVSTPSG
                     STAYNKALGGALIHPSLEAMQITEIASINNRVFRTVGSPLVLPKHHTCLISPVNHDTI
                     RMTIDHVSIKHKNVNSIQYRVANEKVRFARFRPFPFWKRVHDSFISSDEER"
     gene            3984..4838
                     /locus_tag="O7798_001890"
     CDS             3984..4838
                     /locus_tag="O7798_001890"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499497.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RluA family pseudouridine synthase"
                     /protein_id="HDC2864147.1"
                     /translation="MKFKYHISQQETVKTFLARHDFSKKTVSAIKNNGALIVNDEPVT
                     VRKQLMTNDILEIHLPREIPSVNLIPYARKLEVLYEDAFIIIVTKPNNQNCTPSREHP
                     HESLIEQVLYHCQEHGENINPHIVTRLDRNTTGIVIFAKYGHIHHLFSKVNLKKIYTC
                     LVYGKTHTSGIIEANIRRSKDRIITREVASDGKYAKTSYEVINQNDKYSLCKVHLHTG
                     RTHQIRVHFQHIGHPIVGDSLYDGFHDKIHGQVLQCTQIYFVHPINKNNIYITIDYKQ
                     LLKLFNQL"
     gene            4859..6244
                     /gene="mgtE"
                     /locus_tag="O7798_001891"
     CDS             4859..6244
                     /gene="mgtE"
                     /locus_tag="O7798_001891"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499498.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="magnesium transporter"
                     /protein_id="HDC2864148.1"
                     /translation="MSMNTDEKERVQEELYDQTLLDQYLENDDIDQFRDEFLALHTYE
                     QSEYFEDTTDENRQKIFQYLSPEEVANFFDQLDIDDDEYELLFDKMNATYASHILEEM
                     SYDNAVDILNELTKPKVASLLTLMNKDDANEIKALLHYDEDTAGGIMTTEYLSLKAHT
                     PVKEALLLVKAQAPDAETIYVIFVVDDDGKLVGVLSLRDLIVAENDAYIEDIMNERVI
                     SVNVADDQEDVAQVMRDYDFMAVPVIDYQEHLLGIITIDDILDVMDEEASEDYSRLAG
                     VSDIDSTNDSIIKTALKRLPWLIILTFLGMITATILGRFEKTLENVALLAAFIPIISG
                     MSGNSGTQSLAVSVRNITTGEINEQSKFRIALREAGSGVLSGVVCSTILFTIIVAIYH
                     QPLLALIVAGSLTCAMTVGTFVGSMIPLLMNKLNIDPAVASGPFITTINDIISMLIYF
                     GLATSFMAYLI"
     gene            6254..8098
                     /locus_tag="O7798_001892"
     CDS             6254..8098
                     /locus_tag="O7798_001892"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499499.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="monovalent cation:proton antiporter family
                     protein"
                     /protein_id="HDC2864149.1"
                     /translation="MEFLSLVIVVLAAFLTPIIVNRLNINFLPVVVAEILMGIVIGNS
                     FLNIVERDSILNILSTLGFIFLMFLSGLEIDFKAFKKDKRARQGQNDDESSIPGHLNL
                     ALTVFAFIMIISILLAYVFKWLGLVDDVLLMVIIISTISLGVVVPTLKEMNIMRTTIG
                     QFILLVAVLADLVTMILLTVYGAINGQGGSTIWLIGILVVFTAISYILGVQFKRMSFL
                     QKLMDGTTQIGIRAVFALIILLVALAEGVGAENILGAFLAGVVVSLLNPDEEMVEKLD
                     SFGYGFFIPIFFIMVGVDLNIPSLIKEPKLLIIIPILIVAFIISKLIPVMFIRRWFDM
                     KTTIASAFLLTSTLSLVIAAAKISERLNAISAETSGILILSAVITCVFVPIIFKKLFP
                     VPDEFNRKIEVSLIGKNQLTIPIAQNLTSQLYDVTLYYRKDLSDRRQLSDDITMIEIA
                     DYEQDVLERLGLFDRDIVVCATNDDDINRKVAKLAKAHQVERVICRLESTTDDTELVD
                     SGIEIFSSYLSNKILLKGLIETPNMLNLLSNVETSLYEIQMLNYKYENIQLRNFPFGG
                     DIIFVRIIRNNESIVPHGDTQLRYGDRLIVTGAKEYVDELKQELEFYF"
     gene            8376..9146
                     /gene="fabI"
                     /locus_tag="O7798_001893"
     CDS             8376..9146
                     /gene="fabI"
                     /locus_tag="O7798_001893"
                     /EC_number="1.3.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499500.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="enoyl-ACP reductase FabI"
                     /protein_id="HDC2864150.1"
                     /translation="MLNLENKTYVIMGIANKRSIAFGVAKVLDQLGAKLVFTYRKERS
                     RKELEKLLEQLNQPEAHLYQIDVQSDEEVINGFEQIGKDVGNIDGVYHSIAFANMEDL
                     RGRFSETSREGFLLAQDISSYSLTIVAHEAKKLMPEGGSIVATTYLGGEFAVQNYNVM
                     GVAKASLEANVKYLALDLGPDNIRVNAISAGPIRTLSAKGVGGFNTILKEIEERAPLK
                     RNVDQVEVGKTAAYLLSDLSSGVTGENIHVDSGFHAIK"
     gene            complement(9341..10426)
                     /locus_tag="O7798_001894"
     CDS             complement(9341..10426)
                     /locus_tag="O7798_001894"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499501.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AI-2E family transporter"
                     /protein_id="HDC2864151.1"
                     /translation="MLNKVWFRTGIALIMLFILIKLFMEVHEVFTPIATIIGSVFLPF
                     LISGFLFYICLPFQNLLEKVGFPRWASITTIMLALFAIIGLIVAFVAPIIISNINNLI
                     SQTPALQKEAEQIIKFALAQMDKLPEDVTSRITNMVKSMGDGVTNILSNSLQYITSLI
                     STIFLLIMVPFFLIYMLKDHEKFIPAVAKFFKGERKVFFVDLLTDLNFTLKSYIQGQV
                     TVSVILGIFLYIGYSIIDLPYIPLLVLFAGVANLIPFLGSWLSFAPAAILGIIDSPTT
                     FIWVCIITLIAHQLEGNIITPNVMGKSLSIHPLTIIVVILAAGDLGGFTLVLIAVPLY
                     AVLKTVVSNIFKYRQRIIDKANSNVKD"
BASE COUNT         3625 a         1484 c         1866 g         3609 t
ORIGIN      
        1 acgttctaat aatttaatgt tgcaaaatta agagtcagta aaaagacctc gttacattta
       61 tggtgtacga ggtctttaat ttatttattt tgatttgatt ttaggcattt tagatttcca
      121 gaaatcgcca tctggatatt taagtttttc aattttttgt tgaatggcta acttctttaa
      181 ctctttgttt aaaagttttt ctggccattc ataaatagta agtaattctt ccatcgttac
      241 aagttgttgt tgctgtatat aagtttctaa tttaggagga agattctttt cgataggttt
      301 acccatcaat tcattaatta tataagtata gatgtgatat gggtataatc cttcgacttt
      361 taaaccttct tcatgaacat cttcactaaa gaaaacgaga gaaggggctt gttcgatttc
      421 catttctctt gcaatatgca aatcaatttt caagctttcg gttagtttac ttttttgtaa
      481 gtcgtcttta aatacttcta aatcaatacc tgcattttga atacagtcac aaatcattga
      541 ttctgtaata atatctcttt taggtatgat ttcattttgc attaaatgta taaatcgttc
      601 ggcacgtaca cgaccttgta actcagctgc tttataagct agggcgatgt tatcaaagtt
      661 ggatgtactt tgagcttggc atttcgttaa tacttttaac gaaggattta atatatgtct
      721 gatacgtata tattgattat attcaattct taatttggat aagattgctg ataatttgaa
      781 gcaatcggag ctaaatggat cgaaaaatga ataaatttcg attttactta caggtgatag
      841 attgatatct tcacgactct tattttccat tattcgtaat tctccagcca tgtttattca
      901 cctacaatta attttaggaa ttcaccatat gattagcagt taatcttaag cgctcaaata
      961 aataatctcc aacaccttgt ggaaacgcag cgcgattaat tgctgtctgc atattttcta
     1021 accatgcatc tctttcaaat tcagtgattg taaaatctat atgtcttttt cttagcatag
     1081 gatgtccgtg ttcttcggta taaatgtttg gaccgcccaa aaactgtgtt aaaaattgtt
     1141 tttgtttacg acttgtttct gcaaaatctc ctggaaacag gtgattaagt cgttcatctt
     1201 tttctacaag ggtgtaaaaa taatcaatca tatcgtataa cgcttcttta ccaatgatgt
     1261 catatggtgt tgttgtcatt taatcaccca ttttcaaaaa tttactgtta cgaacttaag
     1321 ttaatatata actaatataa catgatttta aacatttgaa agaaatatgc atatttgcca
     1381 atttaattta tattgtttga aagtgtttct tttttcttga aaaaacgttg aactttattt
     1441 aaaggttgat gatgttcgag gtttagttcg tttaataaag attggaactt ttgtaaacct
     1501 tgattatagt ctttaacttc gaactctaac tcataatccg tagtatcgaa atactcactt
     1561 ttatctaaaa ccagtaaatc acctttatat ttagtttctt ggcgatatgt cgttaatgca
     1621 ccaagtattg ataaagttgt atcttttaca ccaaactgtt caactataat ttgacgaatg
     1681 tcatctggaa gattgtcgtt tgaaataatc aagttcatct ctggtttaat gtcgacgata
     1741 tagttgtatt ctaatagacc aacctttgct ggtgtcttta aagtcatttc atattgattg
     1801 tctttaactc ttatgcgtag tgcagagcga tgttccttta atttgaaatc gggtgtatca
     1861 atatagtaat tgacttgctt aaaaagcaca ctgtctttaa aatatttctc ttgcaattta
     1921 ttatagattg atgcagttat catttgttta aattctattt catgatttgt tgccatgata
     1981 tgtatacacc tcgtatcaaa ttcaatttat cttaactata ttatgaatga caaagttgaa
     2041 ttttaaaagt aatttccttt atctattatc aatgttaatt tgaccattaa aaatagtgtt
     2101 cgtaagtgtt ttgtattatt gaattgtgtt aaaatgttat ggaataagag gaggattaag
     2161 catgcgttta tatattaatg aaattaaaat taaagatgac atactttatt gttatacaga
     2221 agattctatt aaaggattat ctgaagtagg acaaatgctc gttgatagtg ataattatgc
     2281 ctttgcgtat acattagatg atggtaaagc gtatgcttat ctcattttcg tacaagaaac
     2341 atggacgatg ttgcatgaaa agatgactaa aaaaattatt atcaatgatg aactagaatt
     2401 gactgaattc caccaagaac ttacttatat tttagacaac ataaaaggga ataataatta
     2461 tggtaaggaa tttgttgcaa ccgttgaaga aacattcgac attgaataaa gcggggtgaa
     2521 gcactatgaa tcaatgggat cagttcttaa caccttataa gcaagcggtt gatgagttga
     2581 aagtgaaact taaaggcatg cgcaaacaat atgaagttgg tgaacaagcg tcgccaatag
     2641 aatttgttac tggtcgtgtt aaaccaatcg ctagtattat agataaggca aacaaacgac
     2701 aaataccatt tgataggtta agagaagaaa tgtacgatat cgctggttta agaatgatgt
     2761 gccaatttgt tgaagatatt gatgttgtcg tcaatatttt aagacaaaga aaagatttta
     2821 aagtaattga agaacgagat tatattcgta acactaaaga aagtggttac cgctcgtatc
     2881 atgtcattat tgaatatcca attgaaacat tacaaggcca aaaatttata ttggctgaga
     2941 ttcagattcg tacattagca atgaatttct gggcaacgat tgaacatact ttacgatata
     3001 aatatgatgg tgcttatccg gatgaaattc aacatcgttt ggaaagagcg gcagaagcag
     3061 cgtatttact tgatgaagag atgtctgaaa ttaaagatga aattcaggaa gctcaaaaat
     3121 attacacgca aaaacgttct aaaaaacatg aaaatgatta acgaggtgtt ataaatcatg
     3181 cgttatacaa ttttaactaa aggtgactcc aagtctaatg ccttaaagca taaaatgatg
     3241 aactatatga aagattttcg catgattgag gatagtgaaa atcctgaaat tgttatttca
     3301 gttggtggtg acggtacatt actacaagca ttccatcagt atagccacat gttatcaaaa
     3361 gtggcatttg ttggagttca tacaggtcat ttaggatttt atgcggattg gttacctcat
     3421 gaagttgaaa aattaatcat cgaaattaat aattcagagt ttcaggtcat tgaatatcca
     3481 ttgcttgaaa ttattatgag atacaacgac aacggctatg aaacaaggta tttagcatta
     3541 aatgaagcaa cgatgaaaac tgaaaatggc tcaacacttg ttgtggatgt taacttaaga
     3601 gggaaacact ttgagcgatt tagaggcgat ggattatgtg tatcaacacc ttcgggttca
     3661 acggcttata acaaagcgct aggtggcgca ctgatacatc cttcacttga agcaatgcaa
     3721 attacagaaa ttgcctcgat aaataatcgt gtgtttagaa cggtaggatc accacttgta
     3781 ttaccaaagc atcatacatg tttaatatca ccagttaatc atgataccat tagaatgacg
     3841 atagatcatg ttagtatcaa acataaaaat gttaattcaa tacaataccg tgtagcaaat
     3901 gaaaaagtga ggtttgcacg ttttagacca ttcccattct ggaaacgtgt gcacgattct
     3961 ttcatatcaa gtgatgaaga acgatgaaat ttaagtatca tatatcacaa caagaaactg
     4021 ttaaaacttt tttagcacga catgattttt ctaagaagac agtgagcgcc attaaaaata
     4081 atggcgcttt aattgttaat gatgaaccag tcacagtgcg taagcaatta atgacaaatg
     4141 atatattaga aattcattta ccgcgagaaa taccgagtgt taatttaata ccttatgctc
     4201 gtaagctaga agtattgtat gaagatgctt ttatcatcat agttactaaa ccaaacaatc
     4261 aaaattgtac gccttcgaga gaacatcctc atgaaagttt aatcgaacaa gtactatatc
     4321 attgtcagga acatggtgaa aatattaacc cacatattgt tacgcgtcta gatcgtaata
     4381 caactggtat tgtgatattc gctaaatatg gacatatcca tcatttattt tctaaagtaa
     4441 acttgaaaaa aatatatact tgccttgtat atggtaaaac ccatacatct ggtattattg
     4501 aagctaatat tagacggtca aaggatagga ttataactag agaagttgcc tcggatggta
     4561 aatacgctaa aacatcttat gaagtaataa atcagaatga taaatacagt ttatgcaaag
     4621 ttcatttgca tacgggacgt acacatcaaa ttcgtgtaca ttttcaacat attgggcatc
     4681 caattgtggg agattctttg tatgatggtt ttcatgacaa aattcatggt caagtactgc
     4741 aatgtacgca aatatatttt gttcatccaa tcaataagaa caatatttat attacaattg
     4801 attataagca attacttaaa ttattcaatc aactctaatt cacacagggg gtgtaagtat
     4861 gtcaatgaac acagatgaaa aagagcgtgt tcaagaggaa ttatacgacc aaactttatt
     4921 agatcaatat ttagaaaatg atgatattga tcaatttaga gatgaatttc tagcattaca
     4981 cacatatgaa caaagtgagt attttgaaga tactaccgat gaaaatagac aaaagatttt
     5041 tcaatattta tcacctgaag aagttgcaaa tttctttgat caattagata ttgatgacga
     5101 tgaatatgag ttgctatttg ataagatgaa tgcgacatac gcaagtcaca tattagaaga
     5161 aatgtcatac gacaatgcag tagatatttt aaatgagttg actaaaccaa aagttgctag
     5221 tcttttaaca ttgatgaata aagatgacgc gaatgaaatc aaagcattac ttcactatga
     5281 tgaggatacg gccggcggta ttatgacgac ggagtattta tcacttaaag cgcatacgcc
     5341 tgttaaagaa gcattattat tggtcaaagc gcaagcacca gacgcagaaa caatatatgt
     5401 tatatttgtc gttgatgatg atggtaaatt agtaggtgtt ttatcgctaa gagatttaat
     5461 tgtagctgaa aatgatgctt atattgaaga tattatgaat gaacgtgtca ttagtgtgaa
     5521 tgtagcagac gaccaagaag atgttgctca agttatgaga gactatgatt tcatggctgt
     5581 acctgttata gattaccaag aacatttgct tggtatcatc acgattgatg atattttaga
     5641 cgttatggat gaagaggcta gtgaagacta ctctcgttta gccggggtat cagatatcga
     5701 ttcgactaat gattcaatca ttaaaacagc attaaaacgt ttaccatggt tgattatttt
     5761 aacattttta ggaatgatta ctgcgacaat tttagggaga ttcgaaaaaa cattagaaaa
     5821 tgtagcgcta ctcgcagcgt ttattcctat tattagtggt atgtcaggaa attcaggtac
     5881 acaatcttta gccgtttcag ttcgtaacat tacgacaggg gaaattaatg agcaaagtaa
     5941 atttagaatt gcattaagag aagcaggaag tggtgtatta tcgggtgttg tatgttcaac
     6001 aatattattt acaattattg ttgcaatata tcatcagcca cttttagcat taatcgttgc
     6061 aggaagttta acttgtgcga tgacggtggg gacgtttgta ggttcgatga ttccattatt
     6121 gatgaataaa ttaaatatcg atccagcagt ggctagtgga ccatttatta caacaattaa
     6181 tgatattatt agtatgttga tttattttgg tttagctaca tcatttatgg cttacttaat
     6241 ttaaggagga gttatggagt ttttatcttt agttattgtt gttttagcag cgtttttaac
     6301 tccaataatt gtcaatcgat taaatattaa tttcttgcca gttgttgttg cagaaatttt
     6361 gatggggatt gtgattggaa attcatttct aaatatagta gaaagggatt caattctaaa
     6421 tattttatca acgttaggct ttatcttttt aatgttttta agtggtttag aaattgattt
     6481 taaagctttt aaaaaagata aacgcgcacg tcaaggacaa aatgatgatg aatcctcaat
     6541 tccagggcat cttaatctag cgttaactgt atttgcattt attatgatta tttcgattct
     6601 tttagcgtat gtatttaaat ggcttggatt agtggatgat gtgttattaa tggtcattat
     6661 catttcaact atttccttag gcgtagttgt tccaacttta aaagaaatga atattatgag
     6721 aacaactata gggcaattta tcctattagt agcagtactt gcggacttag taactatgat
     6781 tttattaacg gtctatggcg caatcaatgg tcaaggcggc agtacaatat ggttaatagg
     6841 tatattagtt gttttcacag caatttcata tattttaggt gttcaattta aaagaatgtc
     6901 atttttacaa aaattgatgg atggtacgac gcaaatcggt attcgtgcgg tatttgcatt
     6961 aataatatta ttagtagccc tagcagaggg agttggcgca gaaaatatat taggtgcatt
     7021 cttagcaggt gtcgttgttt cattattaaa tccagatgaa gaaatggttg aaaagttaga
     7081 ctcatttggt tatgggttct ttattcctat tttctttata atggttggtg tagatttaaa
     7141 cataccttca ttaattaaag aaccgaaatt actaattatc ataccgattt taatcgttgc
     7201 atttatcatt tcaaaattaa ttccagtcat gtttattcga cgttggtttg atatgaaaac
     7261 aacgattgca tcagcatttt tattaacatc aacattatcg ctcgtgatag ctgcagccaa
     7321 aatttcagaa agattaaatg ctatttcagc tgaaacgtca ggtatattaa ttttaagcgc
     7381 agtcattaca tgtgtattcg ttccgattat tttcaaaaaa ctgtttccag ttccagatga
     7441 gtttaaccgt aaaattgaag ttagtttaat tggtaaaaat caattaacga ttcctatagc
     7501 gcaaaattta acatctcagt tatatgacgt gacattatat tatcgcaaag acttgagtga
     7561 tcgtcgtcaa ttgtcagatg atatcacgat gatagaaatt gctgattatg aacaagatgt
     7621 tttagaacga ctaggtctgt ttgaccgaga catagttgtt tgtgctacga atgacgatga
     7681 tattaaccga aaagttgcta aattagccaa agcacatcaa gttgagcgtg tcatttgcag
     7741 acttgaaagc acaacggacg atacagagtt agttgattca ggtattgaaa ttttcagtag
     7801 ctacttaagt aataaaatct tattaaaagg tttaattgaa acacctaaca tgttgaattt
     7861 attaagtaat gttgaaacgt cactatatga aattcaaatg ttaaattata aatatgaaaa
     7921 tattcaatta cgtaatttcc cattcggagg agacatcatc ttcgtgcgta ttatccgtaa
     7981 taatgagtcg attgttccgc atggagatac acaattgcga tatggagatc gcttaattgt
     8041 taccggtgct aaagaatacg ttgatgaatt gaagcaagag ttagaatttt atttttaaca
     8101 ataatgatat taaaatgcag acgtatttta gtacgacgta aaattaatga ttttaaaatg
     8161 ctagtatgta tatgattttg ataaataaat gctttttacg taaatcaagt ttgatacaga
     8221 aaggactaaa tcaaacattt atcgttgtaa tacgtttaaa taactttatt aaaaagtcat
     8281 aatagtgtta aaatgtattg acgaataaaa agttagttaa aactgggatt agatattcta
     8341 tccgttaaat taattattat aaggagttat cttacatgtt aaatcttgaa aacaaaacat
     8401 atgtcatcat gggaatcgct aataagcgta gtattgcttt tggtgtcgct aaagttttag
     8461 atcaattagg tgctaaatta gtatttactt accgtaaaga acgtagccgt aaagagcttg
     8521 aaaaattatt agaacaatta aatcaaccag aagcgcactt atatcaaatt gatgttcaaa
     8581 gcgatgaaga ggttattaat ggttttgagc aaattggtaa agatgttggc aatattgatg
     8641 gtgtatatca ttcaatcgca tttgctaata tggaagactt acgcggacgc ttttctgaaa
     8701 cttcacgtga aggcttcttg ttagctcaag acattagttc ttactcatta acaattgtgg
     8761 ctcatgaagc taaaaaatta atgccagaag gtggtagcat tgttgcaaca acatatttag
     8821 gtggcgaatt cgcagttcaa aactataatg tgatgggtgt tgctaaagcg agcttagaag
     8881 caaatgttaa atatttagca ttagacttag gtccagataa tattcgcgtt aatgcaattt
     8941 cagctggtcc aatccgtaca ttaagtgcaa aaggtgtggg tggtttcaat acaattctta
     9001 aagaaatcga agagcgtgca cctttaaaac gtaatgttga tcaagtagaa gtaggtaaaa
     9061 ctgcggctta cttattaagt gatttatcaa gtggcgttac aggtgaaaat attcatgtag
     9121 atagcggatt ccacgcaatt aaataatatc attcaacagc tttgttcacg ttattatata
     9181 tgtgagcaaa gcttttttgc ttttataata atcggactga tggaaaatta tttgatattt
     9241 catttgactg attttttatg cacaaaaaaa tcgcatcaaa agctgtagtt tcaacttttg
     9301 atgcgatagt atcttatatt cttaaaagac atccacagaa ttagtcctta acattactgt
     9361 ttgctttatc aataatgcgt tggcggtatt tgaaaatatt actaacaacc gttttaagta
     9421 cagcatataa tggcactgca atcagaacta atgtaaagcc acctaaatct cctgctgcta
     9481 aaataacaac gataattgtt aaaggatgga tacttaaaga tttacccatt acatttggtg
     9541 taatgatatt accttcaagt tgatgtgcaa ttaatgtaat gatacaaacc catataaatg
     9601 tagtaggact atctataata ccgagtattg ctgcaggtgc aaatgataac catgaaccta
     9661 agaaaggaat taagtttgcg acaccagcaa atagtactaa taaaggaata tatggtaagt
     9721 caataattga ataaccgata tataagaata tacctaaaat aacactgaca gttacttgac
     9781 cttgaatgta agattttaat gtaaagttta aatcagttaa taaatctacg aaaaatactt
     9841 tacgttcacc tttgaaaaat ttagcaacag ctgggataaa tttttcatgg tcttttaaca
     9901 tataaattaa gaagaatgga accataatca ataagaagat ggttgaaatt aatgatgtaa
     9961 tgtactgtaa tgaattagat aaaatattag taacgccatc acccattgat ttaaccatat
    10021 ttgtaattct acttgttaca tcttcaggta atttatccat ttgagctagt gcgaatttaa
    10081 taatttgctc tgcttctttt tgtagggcag gtgtctgact aattaaattg ttgatatttg
    10141 aaatgatgat tggtgcaaca aacgcaacaa ttaagccgat aatagcaaac aaagctaaca
    10201 tgattgttgt tatactagcc catcttggaa aaccgacttt ttcaagtaag ttttgaaaag
    10261 gtagacagat ataaaataaa aaaccactaa ttaaaaatgg aagaaataca gaaccgatga
    10321 ttgtagctat tggagtaaat acttcgtgca cttccataaa tagtttgatg agaatgaaca
    10381 gcataatcag agcgatgcca gttcggaacc aaaccttgtt taacataaac gatgttcctc
    10441 ctatttttct aaacttagtt attatttagt atatcctaaa tagcagtgct taaaaaggtt
    10501 aatatttttt aaatatactt aaattaacca ttcactttct attttaagat atttactttc
    10561 aatagtttgt gagacttttc aatg
//
LOCUS       DALPQQ010000090        10448 bp    DNA     linear   BCT 22-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus strain K18-6-464
            SAMD00233528-rid16434743.denovo.090, whole genome shotgun sequence.
ACCESSION   DALPQQ010000090 DALPQQ010000000
VERSION     DALPQQ010000090.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMD00233528
            Sequence Read Archive: DRR236061
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 10448)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10448)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001543423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001543423.1
            Genome Coverage       :: 77x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/22/2022 17:09:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,811
            CDSs (total)                      :: 2,743
            Genes (coding)                    :: 2,689
            CDSs (with protein)               :: 2,689
            Genes (RNA)                       :: 68
            rRNAs                             :: 2, 4, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 4, 2 (16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 54
            CDSs (without protein)            :: 54
            Pseudo Genes (ambiguous residues) :: 0 of 54
            Pseudo Genes (frameshifted)       :: 27 of 54
            Pseudo Genes (incomplete)         :: 27 of 54
            Pseudo Genes (internal stop)      :: 10 of 54
            Pseudo Genes (multiple problems)  :: 10 of 54
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10448
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMD00233528-rid16434743.denovo.090"
                     /strain="K18-6-464"
                     /db_xref="taxon:1280"
                     /geo_loc_name="Japan: Niigata"
     gene            complement(310..1014)
                     /locus_tag="O7798_001895"
     CDS             complement(310..1014)
                     /locus_tag="O7798_001895"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498976.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="superantigen-like protein SSL5"
                     /protein_id="HDC2864152.1"
                     /translation="MKMTAIAKASLALGILATGTITSLHQTVNASEHKAKYENVTKDI
                     FDLRDYYSGASKELKNVTGYRYSKGGKHYLIFDKNRKFTRVQIFGKDIERFKARKNPG
                     LDIFVVKEAENRNGTVFSYGGVTKKNQDAYYDYINAPRFQIKRDEGDGIATYGRVHYI
                     YKEEISLKELDFKLRQYLIQNFDLYKKFPKDSKIKVIMKDGGYYTFELNKKLQTNRMS
                     DVIDGRNIEKIEANIR"
     gene            complement(1378..2304)
                     /locus_tag="O7798_001896"
     CDS             complement(1378..2304)
                     /locus_tag="O7798_001896"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498975.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="superantigen-like protein SSL4"
                     /protein_id="HDC2864153.1"
                     /translation="MKITTIAKTSLALGLLTTGVITTTTQAANATTPSSTKVEAPQST
                     PPSTKIEAPQSKPNATTPPSTKVEAPQQTANATTPPSTKVTTPPSTNTPQPMQSTKSD
                     TPQSPTTKQVPTEINPKFKDLRAYYTKPSLEFKNEIGIILKKWTTIRFMNVVPDYFIY
                     KIALVGKDDKKYGEGVHRNVDVFVVLEENNYNLEKYSVGGITKSNSKKVDHKAGVRIT
                     KEDNKGTISHDVSEFKITKEQISLKELDFKLRKQLIEKNNLYGNVGSGKIVIKMKNGG
                     KYTFELHKKLQENRMADVIDGTNIDNIEVNIK"
     gene            complement(2413..2550)
                     /locus_tag="O7798_001897"
     CDS             complement(2413..2550)
                     /locus_tag="O7798_001897"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498974.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDC2864154.1"
                     /translation="MFVKVAFLCLKSDETSNVPSVESHQNHFYLTNIMDFLIYLTMIQ
                     I"
     gene            complement(2669..3739)
                     /locus_tag="O7798_001898"
     CDS             complement(2669..3739)
                     /locus_tag="O7798_001898"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498973.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="superantigen-like protein SSL3"
                     /protein_id="HDC2864155.1"
                     /translation="MKMRTIAKTSLALGLLTTGAITVTTQSVKSEKIQSTKVDKVPTL
                     KAERLAMINITAGANSATTQAANTRQERTPKLEKAPNTNEEKTSASKIEKISQPKQEE
                     QKTLNISATPAPKQEQSQTTTESTTPKTKVTTPPSTNTPQPMQSTKSDTPQSPTIKQA
                     QTDMTPKYEDLRAYYTKPSFEFEKQFGFMLKPWTTVRFMNVIPNRFIYKIALVGKDEK
                     KYKDGPYDNIDVFIVLEDNKYQLKKYSVGGITKTNSKKVNHKVELSITKKDNQGMISR
                     DVSEYMITKEEISLKELDFKLRKQLIEKHNLYGNMGSGTIVIKMKNGGKYTFELHKKL
                     QEHRMADVIDGTNIDNIEVNIK"
     gene            complement(4030..4725)
                     /locus_tag="O7798_001899"
     CDS             complement(4030..4725)
                     /locus_tag="O7798_001899"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498972.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="superantigen-like protein SSL2"
                     /protein_id="HDC2864156.1"
                     /translation="MKMKNIAKISLLLGILATGVNTTTEKPVHAEKKPIVISENSKKL
                     KAYYNQPSIEYKNVTGYISFIQPSIKFMNIIDGNSVNNIALIGKDKQHYHTGVHRNLN
                     IFYVNEDKRFEGAKYSIGGITSANDKAVDLIAEARVIKEDHTGEYDYDFFPFKIDKEA
                     MSLKEIDFKLRKYLIDNYGLYGEMSTGKITVKKKYYGKYTFELDKKLQEDRMSDVINV
                     TDIDRIEIKVIKA"
     gene            complement(5011..5691)
                     /locus_tag="O7798_001900"
     CDS             complement(5011..5691)
                     /locus_tag="O7798_001900"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498971.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="superantigen-like protein SSL1"
                     /protein_id="HDC2864157.1"
                     /translation="MKFKAIAKASLALGMLATGVITSNVQSVQAKAEVKQQSESELKH
                     YYNKPILERKNVTGFKYTDEGKHYLEVTVGQQHSRITLLGSDKDKFKDGENSNIDVFI
                     LREGDSRQATNYSIGGVTKSNSVQYIDYINTPILEIKKDNEDVLKDFYYISKEDISLK
                     ELDYRLRERAIKQHGLYSNGLKQGQITITMNDGTTHTIDLSQKLEKERMGESIDGTKI
                     NKILVEMK"
     gene            6163..7008
                     /locus_tag="O7798_001901"
     CDS             6163..7008
                     /locus_tag="O7798_001901"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498970.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HDC2864158.1"
                     /translation="MNIMLTGATGHLGTHITNQAIANHIDHFHIGVRNVEKVPEDWRG
                     KVPVRQLDYFNQESMVEAFKGMDTVVFIPSIIHPSFKRIPEVENLVYAAKQSGVAHII
                     FIGYYADQHNNPFHMSPYFGYAARLLATSGIDYTYVRMAMYMDPLKPYLPELMNMHKL
                     IYPAGDGRINYITRNDIARGVIAIIKNPDTWGKRYLLSGYSYDMKELAAILSEASGTE
                     IKYEPVSLETFAEMYDEPKGFGALLASMYDAGARGLLDQESNDFQQLVNDQPQTLQSF
                     LQENI"
     gene            7027..7386
                     /locus_tag="O7798_001902"
     CDS             7027..7386
                     /locus_tag="O7798_001902"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498969.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1304 domain-containing protein"
                     /protein_id="HDC2864159.1"
                     /translation="MNIISTILIIFVALEFFYIMYLETIAITSKKTSETFNISVDKLK
                     DKNINLLLKNQGVYNGLIGVLLIYGLFISSNPKEICAAILVYIIGVAIYGGLSSNISI
                     FFKQGTLPVLALISMLW"
     gene            7910..8062
                     /locus_tag="O7798_001903"
     CDS             7910..8062
                     /locus_tag="O7798_001903"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_008530238.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDC2864160.1"
                     /translation="MVPEEKGSITLSKEAAIIFAIAKFKPFKNRIKNNPQKTNPFLKL
                     HENKKS"
     gene            8323..8595
                     /locus_tag="O7798_001904"
     CDS             8323..8595
                     /locus_tag="O7798_001904"
                     /inference="COORDINATES: protein motif:HMM:NF013677.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HDC2864161.1"
                     /translation="MTKERRTFSSEFKLQMVRLYKNGKLKNEIIRKYDLKPSIISNSI
                     KQHQNTGPFNHQDNLKSDEKELIKLRKEVQHLKMEHDVLKQILKLI"
     gene            8994..9698
                     /locus_tag="O7798_001905"
     CDS             8994..9698
                     /locus_tag="O7798_001905"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498966.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system PemK/MazF family
                     toxin"
                     /protein_id="HDC2864162.1"
                     /translation="MSKNINQANSKLNTSNKKLKQAYSKSDSKNMKVIYMPHWLEFYS
                     IAIHSDVTSNKKRYYKSYSRGTVVYVKLGSNIGSEFSGNHFCVILDNKDNKGKETVTI
                     VPLSSKGNKNYLKLNESVLNLTATDLKKQIIDISSKVQALAQKYREIDIKLSTEDKKL
                     LSNLNQKANELYRVIGVYSKHKGKDTYVNISAITTISKRRISKINDSDPTGTIIISED
                     DMNEIEKQLKIKFFSN"
     gene            10091..>10448
                     /locus_tag="O7798_001906"
     CDS             10091..>10448
                     /locus_tag="O7798_001906"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498965.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDC2864163.1"
                     /translation="MHNNNEFNKKLKDFIGSDKRMALVKGYVNEYKLTTVLRALNNSD
                     YTKGTIHTRSIGNLKQIVDNRIIPKNITQNTIFKLSNLTLEVNLYERNTIYHGDFAIY
                     YPVESALIIETDTPRLI"
BASE COUNT         3390 a         1697 c         1548 g         3813 t
ORIGIN      
        1 tttttgaacc aatgttaagc taattaatgg aatcctaaca gcgttaatct attttttaaa
       61 cttaacgcag cttttttaac tattcacact ttccctcaat ttaactatgt tttccacatt
      121 gtttcatgtc acgaaaagga caacgcgcga ctataagtat caactatttc cacaagtttt
      181 attggtgttt ttattattca tcgatacgct tcattttcat atctccaaca caaaaaagaa
      241 gctaagcaac ttatgttgcc taactcctct atactatcca tattttacta ttatccatat
      301 ttcattgaat tatctaatgt tggcttctat tttttcaata tttctaccgt caatgacgtc
      361 actcatgcga tttgtttgta attttttatt aagttcaaac gtataatagc cgccatcttt
      421 cattatcact tttatcttac tatctttagg aaacttttta tacagatcaa aattttgaat
      481 taaatactgt ctcaatttaa agtcgagttc tttaagtgaa atctcttctt tataaatgta
      541 gtgtactcta ccgtacgtag caataccgtc accttcatct ctcttgattt gaaatcttgg
      601 tgcgtttata taatcataat aagcgtcttg atttttctta gtgacaccac catatgaaaa
      661 cactgtgcca ttacggtttt ccgcttcttt aacaacaaat atgtctaatc ccggattttt
      721 acgtgcttta aatctttcaa tatctttacc aaatatctgt actcttgtga attttctatt
      781 tttatcaaag ataaggtaat gcttgccacc tttgctataa cgataaccag taacattttt
      841 aagttcctta cttgcgccac tatagtaatc tcttaagtca aagatatctt ttgtcacatt
      901 ttcatatttt gctttatgtt cactcgcatt tacagtttga tgcaatgacg ttattgttcc
      961 tgttgctaaa atacctaatg ctaaacttgc tttcgcaatt gctgtcattt tcatagttgt
     1021 atgctccatt cgtaattatt agatttgttc gcttacgtct attgaatcat acagctttat
     1081 tatagttagc gtatttgacc tttcacatta aaccatgttt aataatcatt gaatcattat
     1141 taagtaaatt aaggaatcta taatgttcgt taaataaaac tgatcccgtt gtgcttcaca
     1201 cccgatagat agggatttac agataaattc aggtctcttc cacgtcatat ttggacccat
     1261 cgaaaattcg ggttctcaaa tcatcgaaca taacaaaaga agctaagcaa catgtaggcc
     1321 gttgtcactt aacttcttgt ttttccgatg acagcttcta tttagagaat gtcatgatta
     1381 ttttatattc acttcaatgt tatcaatatt agtgccatct atgacatctg ccatgcgatt
     1441 ttcttgtaat tttttgtgca attcaaacgt gtactttcca ccgtttttca ttttaataac
     1501 aattttacct gaaccaacgt taccgtacag attatttttt tcaataagtt gttttctcaa
     1561 tttaaaatca agttctttca aggaaatctg ttctttagta atcttgaatt ctgaaacatc
     1621 atgagagatt gtacctttat tatcttcctt agtaattctt actcctgctt tgtgatcaac
     1681 ttttttacta ttactctttg tgataccacc gacagaatat ttttccagat tgtaattatt
     1741 ttcttctaaa acgacaaata catcgacatt cctatgtact ccttcaccat attttttatc
     1801 atctttacca actaaagcaa ttttatatat gaaataatct gggacaacat tcataaatct
     1861 tattgtcgtc cattttttta aaataatacc aatctcattt ttaaattcta aacttggttt
     1921 cgtataatac gctcttaaat ctttaaattt aggatttatt tctgttggta cttgttttgt
     1981 ggttggcgat tgtggtgtgt ctgatttagt agattgcatt ggttgtggcg tgtttgttga
     2041 tggaggtgtt gtcactttag ttgaaggcgg tgttgtcgca tttgctgttt gttgcggtgc
     2101 ttctacttta gttgagggcg gtgttgtcgc gtttggtttt gattgcggtg cttctatttt
     2161 agttgagggc ggtgttgatt gtggtgcttc cactttagtg gaagatggtg ttgtcgcgtt
     2221 tgctgcttgc gttgtcgttg tgattacacc tgttgttaaa aggcctagtg ctaaacttgt
     2281 tttagcaatc gttgttattt tcatagttgt atgctccatt cgtaattatt agatttgttc
     2341 gattacattc attgaatcat acagctttat tatagatggc gtattgctcc attcacatta
     2401 aaccttgttt aactatattt gaatcatcgt taagtaaatt aagaaatcca taatgttcgt
     2461 taaataaaaa tgattttgat gtgattcaac acttggcaca tttgaagttt cgtcactttt
     2521 aagacataga aatgccactt ttacaaacaa atgaatattc gtctttttac atcattacgc
     2581 ataataaaag aagctaagca acatgtaaac cgttgtcact taacttcttg tttttccgat
     2641 gacagcttct atttagagaa tgtcatgatt attttatatt cacttcaatg ttatcaatat
     2701 tagtgccatc tatgacgtct gccatacgat gctcttgcag ttttttgtgt aattcaaacg
     2761 tatatttccc accgtttttc attttaataa cgattgttcc tgaacccatg ttaccgtaaa
     2821 gattatgttt ttcaataagt tgttttctca atttaaaatc aagctctttc aaggaaatct
     2881 cttccttagt aatcatgtat tctgaaacat cgcgtgaaat cataccttga ttatcttttt
     2941 tagtaatgct taattctact ttgtgattaa cttttttact attagtcttc gtgatgccac
     3001 cgacagaata ttttttcaat tgatatttat tgtcttctaa aacgataaat acatcgatat
     3061 tatcgtaagg tccatcttta tattttttct catcttttcc aactaaagct attttataga
     3121 tgaacctatt tggaataaca ttcataaacc taaccgtcgt ccatggtttg agcataaatc
     3181 caaactgctt ttcaaattca aaactcggtt ttgtataata cgctcttaaa tcttcatatt
     3241 taggagtcat atctgtttgt gcttgtttta tggttggaga ttgtggtgtg tctgatttag
     3301 tagattgcat tggttgtggc gtgtttgttg atggaggtgt tgtcacttta gttttcggcg
     3361 ttgtggattc ggttgtcgtt tgtgattgtt cttgtttagg cgctggcgtt gctgatatat
     3421 taagcgtttt ctgctcttct tgtttaggtt gtgatatttt ttctattttg gaagctgagg
     3481 ttttttcctc attagtattt ggtgcctttt cgagtttagg cgtgcgttct tgtcttgtgt
     3541 tagctgcttg tgttgtcgct gaatttgcac ctgctgttat gtttatcatt gctaatcgct
     3601 ctgctttaag cgttggtact ttgtcaactt tagttgattg tattttttct gatttgaccg
     3661 attgcgtcgt tactgtaatt gcgcctgttg ttaaaagccc tagtgctaaa ctggttttag
     3721 caattgttct cattttcata attgtatgct ccaatctata ttatattcga ttgtcttttt
     3781 acgtaatttg aatcatacaa catcattata gatggcgttc taagataatc acattaaacc
     3841 ccttttaaca attattgaag tattattaag taatttaagc aaaaaataat gagtgagtat
     3901 gagattaata tagcgtttct atgtgccttt gaaataattt ttaagcatta aaaagaagtt
     3961 aagcaacgtt tgatcgtcac ttaacctctc tatttcaatt tcaacttatt tcgtcatcaa
     4021 gtatatgtgt tatgctttta taactttgat ttcaattcta tcaatatctg tgacattgat
     4081 aacatcggac atacggtctt cttgtaactt tttatccaat tcaaatgtat actttccata
     4141 gtatttcttt ttgactgtaa tttttcctgt actcatttca ccgtaaagac cataattatc
     4201 aataaggtat tttcttaatt taaaatcaat ctctttcaat gacatcgctt ctttatctat
     4261 tttaaatggg aaaaagtcat aatcatattc accagtatga tcttctttaa taactcttgc
     4321 ttctgctatt aggtcgacag ctttatcgtt tgcactcgtg atacccccaa tagagtactt
     4381 tgcaccttca aatctcttat cctcattaac gtaaaatata ttaagattac gatgtacacc
     4441 cgtatgataa tgttgcttat ctttgccaat taaagcaata ttattaacag aattaccatc
     4501 tatgatattc ataaatttaa tacttggttg aatgaaactg atataacctg tcacattttt
     4561 atattcaata ctaggttgat tataataagc ttttaatttt ttgctatttt cacttattac
     4621 aataggtttc ttttcggcat gaactggttt ttccgttgta gtgtttacac ctgttgctaa
     4681 tattcctaat aacaaactta tttttgcaat atttttcatt ttcatagttg tatgctccaa
     4741 tctattataa ttagattgtt ttattacgta atttgaatca tacacccata ttataggagc
     4801 tgtattcgga tattcacatt aacctgtttt taactattca taaaatatga ttaagctatt
     4861 taagcaaaag ataatgcgtg gtgcgactgt ttgtgtgagt tttgtaactt ttcccctcaa
     4921 aaaaagaagc taagcaacag tacgtcgctt aacttccata tatttccata acaagcacta
     4981 ttcaacatag cgctttgttg ttagaaagta ttatttcatt tctactagaa ttttattaat
     5041 cttagtgccg tcgattgact cacccatacg ttctttttca agtttttgac ttaaatcgat
     5101 tgtatgtgtt gtgccatcat tcattgtaat tgtaatttga ccttgtttaa gaccatttga
     5161 atacaagccg tgttgtttaa tcgcacgttc tcttaatcta taatcaagtt cttttaatga
     5221 gatgtcttct tttgaaatgt agtaaaaatc tttaagtaca tcttcattat ctttcttgat
     5281 ttctaaaatt ggcgtattga tataatcaat atactgcaca ctatttgatt ttgtaacgcc
     5341 accaattgag taatttgttg cttgtctact gtcaccttct ctaaggataa acacatctat
     5401 atttgagttt tctccgtctt taaatttatc tttatcagat ccaagtaaag tgattcgaga
     5461 atgctgttgc cctactgtga cttctaaata gtgtttaccc tcatcagtat atttaaatcc
     5521 agtcacattt ttacgctcta aaattggttt attataatag tgttttaact ctgattcact
     5581 ttgttgttta acttctgctt tcgcttgtac tgattgtaca ttcgatgtaa ttacacctgt
     5641 tgctaacatt cccaatgcta aacttgcttt tgctatcgct ttaaatttca taatttttag
     5701 ccccaatcta tttaaatttg atttttcaat tacgtaatat gaacaatcta cctacattat
     5761 attgaggcgc tatccccttt caaattaaac ctcatttaac taaacttgaa tcattgttaa
     5821 ggtaattaat aaaatgctaa ctgttattaa tcaattctta tccgtcgaga ctctttttta
     5881 tacaaatcac actttatacc atttttattt taaaaactgt aaaactttca gacacaaaac
     5941 agacatcata ttgtcgtagt acctgattaa aattttcaat gatattagtg atacacatca
     6001 actaaaacgc gtcattacgg cattttcaac attaataata tttacgtatt tactatacac
     6061 gtcgacaata aatacagatt agaatttttt ataaaatcaa atgttttgaa aaccatcaaa
     6121 taagtattat gttatgtata taaagattag gagatgaagt gaatgaatat tatgttaaca
     6181 ggtgctacag gtcatttagg cacacatatt acaaatcaag ccattgcaaa tcacatagat
     6241 cattttcaca ttggtgttag aaatgttgag aaagttccag aagattggcg cggaaaagtt
     6301 cctgttcgac aattagatta ttttaatcaa gaaagcatgg tagaagcatt taaaggaatg
     6361 gataccgttg tgtttattcc aagtattatc catccatcat tcaaacgtat tcctgaagtg
     6421 gaaaatttag tatatgcggc aaagcagagc ggcgttgctc atatcatttt cataggttat
     6481 tacgcagatc agcataataa tccattccat atgagtcctt attttggtta tgcagcacgt
     6541 ctattggcaa caagtggcat tgactatacg tatgtaagaa tggcaatgta catggatcca
     6601 cttaaaccat atttaccaga attgatgaat atgcataaac tgatttatcc agctggcgat
     6661 ggtcgtatta attatattac tagaaatgat attgctagag gtgtcattgc tattattaaa
     6721 aatccagata cttggggcaa acgctactta ttatcaggct acagttatga tatgaaagaa
     6781 cttgctgcaa ttttatctga ggcatcaggc acagaaatta aatatgagcc cgtttcatta
     6841 gagacatttg cagaaatgta tgatgaacct aaaggctttg gtgcattatt ggcatcaatg
     6901 tacgacgcag gagcaagagg actattagac caagaatcca atgatttcca acaattagtc
     6961 aatgatcaac cacagacact gcaatcattt ttacaagaaa atatttaata ataaaggagc
     7021 gttatagtga atatcatctc aacaatttta atcatatttg tggcattaga gtttttctat
     7081 attatgtacc ttgaaacgat tgctataact tccaaaaaga ctagcgagac atttaatata
     7141 agcgtcgata aattgaaaga caaaaatatt aacctacttt tgaagaacca aggcgtatat
     7201 aacggtttaa tcggagtttt gctaatatac ggtttgttta tcagcagtaa tccaaaagaa
     7261 atatgcgcag ctattttagt gtatatcatt ggcgttgcta tttatggtgg cctttcaagc
     7321 aatattagta tctttttcaa acaaggcaca ttgccagtat tggcactcat atcaatgctt
     7381 tggtaagtat tggtgtttgg ggggttggag atgtagtcgg aggtttggag gatttgagcg
     7441 aattgtgtgt ggactttaga ctcagagtat ttcatcctaa ttatttcaag cagaggtgac
     7501 agtagcgttg cctctgtttc cttatagaaa aattatttaa tgaagaaaac ccatatctga
     7561 tttaattttc agctgataaa tactccatat attagaatgg ctactttatc tattgcatca
     7621 atcctttaaa acaaaaaacc catgatttcg aaattcccgt atgatggggt tcctactctc
     7681 atggatcagt taaataaata ttatcactat cagtttatta tttcaatatt attaacaata
     7741 tatgtagtcg taaaaggaaa gaggacatga gaacttcggt gttgattggc attacataac
     7801 gcttccaaac atattatttg gtaacaataa gaaactattt acacaatata ttttgtatag
     7861 taaaattatt ttataatatt taaatccaat tgcacaagga gtgattatca tggtaccaga
     7921 agaaaaaggt tctattactt tgtcaaaaga agcagctatc atatttgcaa tcgcaaaatt
     7981 caaaccattt aagaacagaa ttaaaaataa cccacaaaaa acaaatccat ttcttaaatt
     8041 acatgaaaac aaaaaatctt aatcacttta tttatagcat ttctaatctc agaaatgcta
     8101 taaaggacaa cgccctcttt cataactata taagtcaaga aaccaagaca tttcaaacat
     8161 ctttaaaccc ttcaatagca cattccctaa aacataaagc aataacaatg aacgatcaaa
     8221 attccttacg tacttatgat gtgtcagtga atcgtctaca cttaattgaa caaattctat
     8281 gagaatagat attgttaaat taagaaagta gtcaatttta ttatgacaaa agaaagaaga
     8341 acatttagtt cagagtttaa gttacaaatg gttagattat ataaaaatgg taagcttaag
     8401 aatgaaatta tacgaaagta tgatttaaaa ccctcaatta tctcaaattc gataaaacaa
     8461 caccaaaata ctggaccctt caatcatcaa gataatttaa aaagtgatga aaaagagtta
     8521 ataaaattac gcaaagaagt tcaacattta aaaatggaac atgatgtttt aaagcaaatt
     8581 ttaaagttga tttagaaact gaacttttta aagatacatt acttgaagat tctaatttat
     8641 ctgattatat aaagaaccaa cttccaacga tatggagaga ctaagaaata gtttaaattt
     8701 atttaatttc aataaaaact cataataata tttaagtaag ttagattgct tttagcatta
     8761 ggaattcgct tataattaga tgttcaatat agactttttt acacatacat gaactataaa
     8821 aagcgaataa atagcaggtc attgcgaaat ttgctaaata caaaattgat gagttccacc
     8881 taataaaaat tgttggtttt atagtaacat ctattttcgt accattcatg ttaatttcag
     8941 tgctaataat gctgatataa agaagaataa attgattagg agaacactat ttaatgtcta
     9001 aaaatatcaa tcaagcaaat agtaaattaa atacgtcaaa caaaaaacta aaacaagctt
     9061 attcaaaatc cgacagtaaa aacatgaaag ttatatacat gcctcattgg ctagagtttt
     9121 attcaattgc tatacatagc gatgttacaa gcaataaaaa aagatattat aaatcatata
     9181 gtagaggaac agtggtatat gtaaaactag ggagtaatat tggaagtgag ttttctggta
     9241 atcatttttg tgtaatatta gataacaaag acaataaagg aaaagaaaca gttacaatag
     9301 ttccactttc ttccaaaggt aataaaaatt atttgaagtt aaacgaatcg gtgctaaatc
     9361 taacagcaac agatttaaaa aaacagatta tcgatatcag tagtaaagta caagcattag
     9421 cccaaaaata tagagaaatt gacattaaac ttagcacaga agataaaaag cttttgtcta
     9481 acttaaatca aaaagctaat gaactgtata gagtgatagg tgtttattcc aagcacaaag
     9541 ggaaagatac atacgttaat atatcagcaa ttacaacaat aagcaaaaga cgtataagca
     9601 aaataaatga ttctgatcct actggaacga taataatttc agaagatgac atgaatgaaa
     9661 tcgaaaagca attaaagata aagttctttt ctaattgaat tgtaatatta catctgatat
     9721 aattgattta caaattcccg gtaaccattc cggcttcatt ctcttgaaga atgacatatt
     9781 ctcagcgttt tagctgaagg tcagatgata cgtcatctgg cctctttttt tatataaatg
     9841 ccctttaagt gaaatataca acaatctgca atcaatatta gacatcacaa aacacacaat
     9901 aaattacaca atgtgttata agccacatgt cactattatc gcagctagct gcgtcactca
     9961 aaacgaatac ggaacgcgtt ggttatttca atcataatat tactctgcaa atacacagcc
    10021 ctgtaaccga gtaaatggat agagatttga acaaatgaaa acaatcaact aatggaaagg
    10081 ataaaatatt atgcacaaca ataatgaatt caacaaaaaa ctgaaagatt ttataggtag
    10141 cgataaacgg atggctttag taaagggtta tgttaacgag tataaattaa caactgtttt
    10201 aagagcttta aataattccg attacacaaa agggacgata cacactcgtt caataggcaa
    10261 cctaaaacaa atagtagata atcgaattat tcctaaaaat ataactcaaa acacaatctt
    10321 caaattgagt aatttaacct tagaggttaa cctctatgaa agaaacacaa tttatcacgg
    10381 agactttgct atttactatc ctgtagaatc tgctctaata atagaaacag atactcctag
    10441 gctaatta
//
LOCUS       DALPQQ010000091        10378 bp    DNA     linear   BCT 22-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus strain K18-6-464
            SAMD00233528-rid16434743.denovo.091, whole genome shotgun sequence.
ACCESSION   DALPQQ010000091 DALPQQ010000000
VERSION     DALPQQ010000091.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMD00233528
            Sequence Read Archive: DRR236061
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 10378)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10378)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001543423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001543423.1
            Genome Coverage       :: 77x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/22/2022 17:09:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,811
            CDSs (total)                      :: 2,743
            Genes (coding)                    :: 2,689
            CDSs (with protein)               :: 2,689
            Genes (RNA)                       :: 68
            rRNAs                             :: 2, 4, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 4, 2 (16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 54
            CDSs (without protein)            :: 54
            Pseudo Genes (ambiguous residues) :: 0 of 54
            Pseudo Genes (frameshifted)       :: 27 of 54
            Pseudo Genes (incomplete)         :: 27 of 54
            Pseudo Genes (internal stop)      :: 10 of 54
            Pseudo Genes (multiple problems)  :: 10 of 54
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10378
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMD00233528-rid16434743.denovo.091"
                     /strain="K18-6-464"
                     /db_xref="taxon:1280"
                     /geo_loc_name="Japan: Niigata"
     gene            18..794
                     /locus_tag="O7798_001907"
     CDS             18..794
                     /locus_tag="O7798_001907"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000739218.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetylglucosaminidase"
                     /protein_id="HDC2864164.1"
                     /translation="MKKNFKLRISTLLLIVILVVFAVLLIVNETKLFKNDVNYSFDEA
                     VSMQQGKGIVQTKEEDGKFVEANNNEIAKAMTISHKDNDMKYMDITEKVPMSESEVNQ
                     LLKGKGILENRGKVFLEAQEKYEVNVIYLVSHALVETGNGKSELAKGIKDGKKRYYNF
                     FGIGAFDSSAVRSGKSYAEKEQWTSPDKAIIGGAKFIRNEYFENNQLNLYQMRWNPEN
                     PAQHQYASDIRWADKIAKLMDKSYKQFGIKKDDIRQTYYK"
     gene            1105..2229
                     /locus_tag="O7798_001908"
     CDS             1105..2229
                     /locus_tag="O7798_001908"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501040.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent monooxygenase"
                     /protein_id="HDC2864165.1"
                     /translation="MKIAIIGAGIGGLTAAALLQEQGHTIKVFEKNESVKEIGAGIGI
                     GDNVLKKLGNHDLAKGIKNAGQILSTMTVLDDKDRLLTTVKLKSNTLNVTLPRQTLID
                     IIKSYVKDDAIFTNHEVTHIDNETDKVTIHFAEQESEAFDLCIGADGIHSKVRQSVNA
                     DSKVLYQGYTCFRGLIDDIDLKHPDCAKEYWGRKGRVGIVPLLNNQAYWFITINSKEN
                     NHKYSSFGKPHLQAYFNHYPNEVREILDKQSETGILLHNIYDLKPLKSFVYGRTILLG
                     DAAHATTPNMGQGAGQAMEDAIVLVNCFNAYDFEKALQRYDKIRVKHTAKVIKRSRKI
                     GKIAQYRSRLFVAVRNRIMKMMPNALAAGQTKFLYKSKEK"
     gene            complement(2321..3274)
                     /locus_tag="O7798_001909"
     CDS             complement(2321..3274)
                     /locus_tag="O7798_001909"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501039.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-hydroxyacid dehydrogenase family protein"
                     /protein_id="HDC2864166.1"
                     /translation="MEKVYVAGAIPEVGLKLLQEHFEVEMYEGKGLVDKDTLIKGVKN
                     ATALISLLSTNVDKDVIDAGKDLKIIANYGAGFNNIDIEYAREKSIDVTNTPKASTNA
                     TADLTIGLVLAVARRIVEGDQLSRTTGFDGWAPLFFRGREVSGKTIGIIGLGEIGSAV
                     ARRARAFDMDVLYTGPNRKEEKEREIGAKYVDLDTLLKNADFITINAAYNPKMHHLID
                     TEQFKMMKSTAYLINASRGPIVHEQALVQALKDNEIEGAALDVYEFEPDITDDLKSLN
                     NVVLTPHIGNATFEARDMMSKIVANAAISAVQGEKPQFVVN"
     gene            complement(3636..4136)
                     /locus_tag="O7798_001910"
     CDS             complement(3636..4136)
                     /locus_tag="O7798_001910"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501037.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CHAP domain-containing protein"
                     /protein_id="HDC2864167.1"
                     /translation="MKKLVTATTLTAGIGTALVGQAHHADAAENYTNYNNYNYNTTQT
                     TTTTTTTTTTSSISHSGNLYTAGQCTWYVYDKVGGEIGSTWGNANNWAAAAQGAGFTV
                     NHTPSKGAILQSSEGPFGHVAYVESVNSDGSVTISEMNYSGGPFSVSSRTISASEAGN
                     YNYIHI"
     gene            complement(4373..4795)
                     /locus_tag="O7798_001911"
     CDS             complement(4373..4795)
                     /locus_tag="O7798_001911"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501036.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4870 domain-containing protein"
                     /protein_id="HDC2864168.1"
                     /translation="MTTEMNDVTNHQPNRKSNDENIMAMLIYLLSLFTSIIGPLIIWL
                     LKKDESKLVDRAGKNYLNYTISYIIWSIVLVVITLIGVFLIATDIDFIIIIGFIITFI
                     GILSIFAFSILSFVFTIIACVKYYNGQEYIIPLTIRFI"
     gene            5043..6125
                     /locus_tag="O7798_001912"
     CDS             5043..6125
                     /locus_tag="O7798_001912"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501035.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD/NADP octopine/nopaline dehydrogenase family
                     protein"
                     /protein_id="HDC2864169.1"
                     /translation="MKIAIVGSGNGAVTAAVDMVSKGHDVKLYCRNQSISKFQNAIEK
                     GGFDFNNEGDERFVKFTDISDDMEYVLKDAEIVQVIIPSSYIEYYADVMAEHVTDNQL
                     IFFNMAAAMGSIRFMNVLEDRHIETKPQLAEANTLTYGTRVDFENAAVDLSLNVRRIF
                     FSTYDRSCLNDCYDKVSSIYDHLVKEESLIKTNLENGNPEVHPGPTLLNVGRIDYAGE
                     FALYKEGITKHTVRLLHAIELERLNLGRRLGFELSTAKESRIERGYLERDKEDEPLNR
                     LFNTSPVFSQIPGPNHVESRYLTEDIAYGLVLWSSLGRVIDVPTPNIDAVIVIASTIL
                     ERDFFEEGLTVEEIGLDKLDLEKYLK"
     gene            6220..7620
                     /gene="nhaC"
                     /locus_tag="O7798_001913"
     CDS             6220..7620
                     /gene="nhaC"
                     /locus_tag="O7798_001913"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501034.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Na+/H+ antiporter NhaC"
                     /protein_id="HDC2864170.1"
                     /translation="MMKRKPTFLESISTMIVMVIVVVTGFVFFDIPIQVLLIIASAYA
                     TWIAKRVGLTWQDLEKGIAERLNTAMPAILIILAVGIIVGSWMFSGTVPALIYYGLDL
                     LNPSYFLISAFFISAVTSVATGTAWGSASTAGIALISIGNQLGIPPGMAAGAIIAGAV
                     FGDKMSPLSDTTNLAALVTKVNIFKHIHSMMWTTIPVSIIGLLVWFIAGFQFKGHSND
                     KQIQTLLSELAQIYQINIWVWVPLIVIIVCLLFKMATVPAMLISSFSAIIVGTFNHHF
                     KMTDGFKATFSGFNESMIHQSHISSSVKSLLEQGGMMSMTQILVTIFCGYAFAGIVEK
                     AGCLEVLLTTISKGIHSVGSLICITVICCIALVFAAGVASIVIIMVGVLMKDLFEKYQ
                     VSRSVLSRTLEDSSTMVLPLIPWGTSGIYYTNQLHVSVEEFFIWTVPCYLCAIIAIIY
                     GFTGIGIKKSSNSRLT"
     gene            7794..8036
                     /locus_tag="O7798_001914"
     CDS             7794..8036
                     /locus_tag="O7798_001914"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501033.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDC2864171.1"
                     /translation="MTKLIENLKASIFVSTLTKNLSMYSRFDMPKFGCVNGCMLFILY
                     YRVNRIGENRNFEIFTNSIFFIEIKKANKALETLLA"
     gene            complement(8053..8856)
                     /locus_tag="O7798_001915"
     CDS             complement(8053..8856)
                     /locus_tag="O7798_001915"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501032.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CHAP domain-containing protein"
                     /protein_id="HDC2864172.1"
                     /translation="MKKIATATIATAGFATIAIASGNQAHASEQDNYGYNPNDPTSYS
                     YTYTIDAQGNYHYTWKGNWHPSQLNQDNGYYSYYYYNGYNNYNNYNNGYSYNNYSRYN
                     NYSNNNQSYNYNNYNSYNTNSYRTGGLGASYSTSSNNVQVTTTMAPSSNGRSISSGYT
                     SGRNLYTSGQCTYYVFDRVGGKIGSTWGNASNWANAAARAGYTVNNTPKAGAIMQTTQ
                     GAYGHVAYVESVNSNGSVRVSEMNYGYGPGVVTSRTISASQAAGYNFIH"
     gene            9466..>10378
                     /locus_tag="O7798_001916"
     CDS             9466..>10378
                     /locus_tag="O7798_001916"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501031.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HDC2864173.1"
                     /translation="MTDNYSLHIYKSMKMSSVKEANLKIIYWLQGTGVVSINLQQYDV
                     KRNDVTIIMLNDLYQIDGNDDSVCCVVEVSAKTFLKFMNANYMMRGKILTNEVASTFR
                     ILIKYLIYSKIKQQSYNANDKIINYMCVELMSLNTYDGSRHLVAEEVHDYLTNNHHKK
                     INRKDVINQVSITNKALSDMFKATPYSNFIQYLNHIRLEHCLIDILTSKKPIEEIASS
                     HGFNHYSRFIHLFKETYGNTPKLIRKRYSPTSHSINHSQLVEIDKNIIELFDDTNQSS
                     SSMREIDIPFEPTKRSQMYQPKNIYIKG"
BASE COUNT         3561 a         1458 c         1895 g         3464 t
ORIGIN      
        1 aatgaggttt tgtctatatg aagaagaatt tcaagttacg catttcaacg ctactattga
       61 tagttatttt agttgttttt gctgtattac tcatcgtgaa tgaaactaaa ttgtttaaaa
      121 atgatgtgaa ttactctttt gatgaggctg tttcaatgca acaagggaaa ggtattgtac
      181 agacaaaaga agaggatggt aaatttgttg aagcaaataa taatgaaatt gctaaagcaa
      241 tgactatttc acataaagac aatgatatga agtatatgga tatcacagaa aaagtgccaa
      301 tgtcggaatc tgaagttaac caattgctaa aaggtaaggg gattttagaa aatcgaggga
      361 aagtttttct agaagctcaa gaaaaatatg aggttaatgt catttatctt gttagccatg
      421 cattagtaga aacaggtaac ggcaaatcag aattagcaaa aggcattaaa gatgggaaaa
      481 aacgctatta caactttttt ggtataggag cattcgatag tagtgctgtt cgtagtggga
      541 aaagttatgc tgaaaaggaa caatggacat caccagataa ggcgattatt ggtggtgcaa
      601 agttcattcg taatgaatat tttgaaaaca atcaactgaa tttatatcaa atgcgatgga
      661 atccagaaaa tcctgcgcaa catcaatatg cgagtgacat tcgctgggca gataaaattg
      721 ccaaattaat ggataaatcc tataagcagt ttggtataaa gaaagatgat attagacaaa
      781 catattataa ataagacatc ggtgcttaaa ggagctggaa caatttattg tttcgagctc
      841 ctttagcgca ttctgagtgt gttagttaaa tggattttaa cctaacaaaa aacgctatat
      901 agcatcaaat atgctatatc ccacatcatt gttacaaatg tacatgatgt aaatgaatat
      961 tgctgtctaa atgtgcatgt aatatacaat ggtgcagata atacacttaa gtccttaaaa
     1021 atgaaacgtt agttccaaga gtcattttta aacaatagtg catgtgataa aatagaaaag
     1081 aatgaaaaat atagaggtga caatatgaag atagcaatta taggtgcagg catcggtgga
     1141 ttaacagctg ctgcattatt acaagaacaa ggtcatacta ttaaagtctt tgaaaaaaat
     1201 gagtcagtta aagaaattgg cgctgggatt ggtatcggag ataatgtgct taaaaaacta
     1261 ggtaatcatg acttagctaa aggtattaaa aatgctgggc aaatcttatc tacaatgaca
     1321 gtgttagatg acaaagatcg cctgttaact actgttaaat taaaaagtaa tacattgaat
     1381 gtgacgttac cacgccaaac attaattgac attattaaat cttatgtaaa agatgacgca
     1441 atatttacaa atcatgaagt cacgcatata gataatgaga cagataaagt taccatacat
     1501 ttcgcggaac aagaaagtga agcatttgat ttatgtattg gtgctgatgg aattcattct
     1561 aaagtgagac aatctgtaaa tgctgacagt aaagtattat atcaagggta tacatgcttt
     1621 agaggtttaa ttgatgatat tgatttaaag catccggatt gtgcaaaaga atactgggga
     1681 agaaaaggaa gagtaggtat tgttccgtta ttaaataatc aagcatattg gttcattaca
     1741 attaactcga aggaaaacaa tcataaatat agttcgtttg gtaaacctca tttgcaagca
     1801 tactttaatc actatccaaa tgaagttaga gagatcttag acaaacaaag tgaaacaggt
     1861 atcttattgc ataatattta tgatttgaaa ccactcaaat cttttgttta tggtcgtact
     1921 attttactag gagatgcagc acatgcgaca acgcctaata tggggcaagg tgctggacaa
     1981 gcaatggaag atgctatcgt attagtaaat tgttttaacg catacgactt tgaaaaagca
     2041 ttacagcgtt atgataaaat acgtgtcaaa catactgcaa aagtaattaa gcgttctaga
     2101 aaaatcggta aaattgccca atatcgtagt cgtttatttg ttgcagttag aaatcgtatt
     2161 atgaaaatga tgccaaatgc attagcagct ggacaaacta aattcttata taaatcgaaa
     2221 gaaaaataat acaacaatat gaaaaccccc gtatgttgaa acgagagctc aacatatggg
     2281 ggttcttgtt tttataatgt tattataata aattcaatta ttagttaacg acaaattgtg
     2341 gtttctcacc ttgaacggca ctaattgcag cattagcaac aattttagac atcatgtcac
     2401 gtgcttcaaa tgtagcatta ccaatatgcg gtgttaatac tacattatta agtgatttta
     2461 agtcatcggt aatatctggt tcaaattcat atacatcaag tgcagcacct tcaatttcat
     2521 tatctttcaa tgcttgcact agtgcttgtt cgtgcacgat tggaccacga gaggcattga
     2581 ttaaatacgc cgtagatttc atcattttaa attgttctgt atcaattaaa tgatgcattt
     2641 taggattata agcagcgttg atagtgataa aatctgcatt ctttaatagt gtatctaaat
     2701 ctacatattt tgcaccgatt tctcgttctt tttcttcttt gcgattaggt ccagtgtata
     2761 gcacatccat gtcaaatgct cttgcacgac gagctactgc actaccaatt tcacctaaac
     2821 cgataatgcc gattgttttc ccagatactt ctctacctct gaaaaataaa ggtgcccatc
     2881 catcaaatcc agttgtacgt gataattggt ccccttcaac aatacgacgc gctactgcaa
     2941 gtactaatcc aattgttaaa tcagcagtcg cgtttgttga tgctttaggt gtgtttgtaa
     3001 catctatact tttttctcgg gcatactcga tatcaatatt attaaaacca gcgccatagt
     3061 tggcaatgat ttttaagtct ttaccagcat cgataacatc tttatcaacg tttgtagata
     3121 ataaactaat taaggcagtc gcgtttttaa cacctttaat taaagtgtct ttatcgacta
     3181 atcctttacc ttcatacatt tcaacttcaa aatgttcttg taaaagtttt aaacctactt
     3241 ctggtattgc accagcaaca taaacttttt ccataaaaga tcactccttt tatcttagta
     3301 tagtagaaga ttagacagta tacaactatg tcatgatgtc ttgtgtatca atgatgtaag
     3361 cgcgtacttt tgatggaggc gatataactt aggcactgta gaactatgaa tattgtaatg
     3421 tggaaaaact ggatcaatta aattagataa cgtagtttta aagttaatag tattagaaaa
     3481 aattaatatt ttgaatatgg gaggaaatat aaataagtag gtggcaacga aaaatagcaa
     3541 aaaaagagct tctcctataa aggaaagctc aaagtttttt gatgacatat gtactagaat
     3601 taagtttcaa gacaatatgt atcatcgtgt ttatattaaa tatggatgta gttgtagtta
     3661 cctgcttcac ttgcagaaat agttctagaa cttactgaga aaggtccgcc actataattc
     3721 atttctgaaa ttgtaactga accatcactg tttacacttt ctacatatgc aacgtgacca
     3781 aatggtcctt cagaagattg taggatagcg cctttagaag gtgtatgatt tactgtgaat
     3841 ccagcacctt gtgcagcagc agcccaatta ttagcatttc cccaagtaga accgatttct
     3901 ccgccaactt tatcatatac ataccaagta cattgtcctg cagtgtataa gttaccagaa
     3961 tgtgaaattg atgatgtagt tgtcgtagtt gtcgtagtcg ttgtagtttg agtcgtgttg
     4021 tagttatagt tgttgtaatt tgtataattt tcagcagcat ctgcatgatg tgcttgacct
     4081 actaatgctg tgccgattcc tgctgttaac gtagttgctg ttactaattt tttcatgaat
     4141 aaagtcctcc aaagttctat atcttttttt ataaataaaa cgtagcgact gttttattct
     4201 cacatctcga attgatgaca atagttactt taacaaaatt aatgcttctt gtggggaatg
     4261 ttattgattt gtaaaagaat aaaaaaactt tgactaattt tgtaataaaa attagtcaaa
     4321 gttacaatga gattaacaga taattaatag gaaatattta tttgtaatat gtttaaataa
     4381 atcgaattgt taaaggtatt atatattctt ggccattata atatttgaca cacgcaataa
     4441 ttgtgaatac aaaagataat attgagaaag cgaatatgga taaaataccg ataaacgtaa
     4501 tgatgaaacc tataataata atgaaatcaa tatctgtagc aattaggaaa acgcctatta
     4561 aagtgataac gactaaaacg atagaccaaa taatataaga aatcgtatag ttaagataat
     4621 tttttccagc acgatcaact agtttcgatt catctttttt caataaccat attatcagtg
     4681 gaccaataat agatgtgaat aaacttaata aatagataag catcgccata atgttctcat
     4741 cattggattt gcgattcggt tgatgatttg ttacgtcgtt catttcagtt gtcatattag
     4801 acactccttt gaaaattgta atattatctt taactataac aaaatataat caaaaataaa
     4861 catgtttatt aaacaattat taaaaataaa aataattggt ggacgtcggc gtttaaatag
     4921 gttaatttaa ggttatatat acttaacatt tataatgatg cgtaatgaat tcgcatcatt
     4981 tttatattgt cttacgtata atttgttttt aattttaacc aaagatagaa agagggttgt
     5041 ttatgaaaat agcaattgta ggatcaggaa atggcgcagt tacggcagca gtagatatgg
     5101 tgagcaaagg ccacgatgtt aaattatatt gtcgtaatca atctataagt aagtttcaaa
     5161 acgcaatcga aaagggcgga tttgatttta ataatgaagg tgatgaacgt ttcgtaaaat
     5221 tcactgatat tagtgatgat atggaatatg ttttaaaaga tgctgaaatt gttcaagtga
     5281 ttattccatc ttcatacata gagtattatg ctgatgtaat ggcagagcat gtaactgata
     5341 atcagttgat attcttcaac atggctgcag caatggggtc aattcgtttt atgaatgttt
     5401 tagaagatag acatattgaa acaaaaccac aactagcgga agctaatacg ttgacgtatg
     5461 gtacgcgtgt cgattttgaa aatgcagcag ttgatttatc tctaaatgta cgtcgtatct
     5521 tcttttcaac atatgataga agctgtctaa atgattgtta tgacaaagtt tcaagtattt
     5581 atgatcattt agtaaaagag gaaagcttaa ttaaaacaaa tcttgaaaat ggtaatcctg
     5641 aagtgcatcc aggaccaaca ttattgaatg tcggtcgcat tgattatgct ggcgagttcg
     5701 ctttatataa agaaggaatt actaaacata cagttagatt acttcatgca atcgaattag
     5761 aacgtttgaa tttaggccgt agattaggtt ttgaattatc aacagctaaa gaatcacgta
     5821 ttgaacgtgg ttatttagaa cgtgataaag aagatgaacc attaaatcgt ttgtttaata
     5881 caagcccagt attttcacaa attccaggac caaatcatgt agaaagcaga tatttaactg
     5941 aagatattgc atatggttta gtactatggt caagcttagg tcgtgttatt gatgtaccga
     6001 caccaaatat agatgcagta attgtaattg catcaaccat tttagagaga gacttctttg
     6061 aggaaggctt aacagttgaa gaaattggtt tagataagct tgatttagaa aaatatttaa
     6121 aataaatgat ggcttgaaga tagaaaagga tatagcatta tgcaaaagca ataaattgaa
     6181 gaaaagaggt ttctcatcaa taagcgaagg ggacgataga tgatgaaaag aaaacccacc
     6241 tttttagaat caatttcgac aatgattgta atggttattg ttgttgtaac aggctttgtg
     6301 ttttttgata ttccaattca agtattatta attattgcct cagcatatgc cacatggatt
     6361 gcaaaacgtg taggcttaac atggcaagat ttagaaaaag gcattgcaga acgtttaaat
     6421 actgcaatgc ctgcaatttt aattatacta gcggtaggaa ttatagtagg cagttggatg
     6481 ttttctggca cagtgccagc cttgatttat tatggcttag atttattgaa tccaagctat
     6541 tttttaatat cagccttttt tataagtgct gttacatctg tagcaactgg tacagcatgg
     6601 ggctctgcat caactgcagg gattgcactt atttctattg gtaatcaatt ggggattcct
     6661 ccagggatgg cagcgggtgc tattatagca ggggctgtgt ttggcgataa aatgtcacca
     6721 ttatcagata caactaattt agcggcgctt gttactaaag ttaatatatt taaacatata
     6781 cattcgatga tgtggacgac gatacctgta tcaatcatag gtttattagt atggtttatt
     6841 gctggatttc aatttaaagg gcattcaaat gataaacaga ttcaaacttt gttatcagag
     6901 cttgcacaga tttatcaaat taacatatgg gtctgggttc ccttaattgt gatcattgtt
     6961 tgtttgctat ttaaaatggc tacagtgcca gctatgctaa tatcaagctt ttctgccatt
     7021 atagtgggga cttttaatca tcatttcaaa atgacagatg gtttcaaagc aacatttagt
     7081 ggttttaacg aatcaatgat acatcagtct catatttcat ccagtgtgaa aagcttgtta
     7141 gaacagggtg gtatgatgag tatgacccaa atattagtaa cgatattttg cggatatgca
     7201 tttgcaggta ttgtagaaaa agcaggatgt ttagaagtct tattaactac tatttctaaa
     7261 ggcatccatt ctgtaggaag tttaatatgt attactgtta tttgttgtat tgcgcttgta
     7321 ttcgctgcag gtgttgcttc gattgtaatt attatggtcg gtgtgttaat gaaagatttg
     7381 ttcgaaaaat accaagtctc tcgttccgtt ttatcaagaa cacttgaaga ctcaagtacg
     7441 atggtcttac ctttaatacc atggggaaca tcaggtattt actatacgaa tcaacttcat
     7501 gtctctgttg aagaattttt catatggaca gtaccatgtt atttatgcgc aattatagca
     7561 attatctatg gttttacagg gataggtatt aaaaagtcat cgaattcacg tttaacttaa
     7621 tgtgagcgtg gaatatatat aatatgttga aacactttaa tcatttataa ttgtagcggt
     7681 tataatttga aaaggtttta acttagaata aatatcctct atacatatac tgaatatgtt
     7741 ttgtagcgga acatgttgat atatgtaatg taagttttat gtcatgattt gtaatgacta
     7801 aattaattga gaatttgaag gcaagtatat ttgtaagtac tttaactaaa aatttatcaa
     7861 tgtatagccg atttgacatg cctaaatttg ggtgtgtcaa tggctgtatg ttgtttattc
     7921 tttattacag agtgaatcgg attggtgaaa atcgaaattt tgagattttt accaattcga
     7981 tttttttcat agaaattaaa aaagccaaca aggctcttga aaccttgttg gcgtaaacat
     8041 agccatcact aattagtgaa tgaagttata accagcagct tggctagctg agattgtacg
     8101 tgaagttaca acacctgggc cataaccata gttcatttct gaaactctta ctgaaccatt
     8161 gctgttaaca ctttcaacgt atgcaacgtg accgtatgca ccttgagttg tttgcataat
     8221 tgcaccagct tttggtgtat tgttcactgt gtaaccagct cttgcagctg cgttagccca
     8281 gttacttgca ttgccccaag ttgaaccgat tttaccacct acacgatcaa atacgtagta
     8341 tgtacattga ccagaagtgt ataagttacg tcctgaagta taaccacttg agattgaacg
     8401 gccatttgat gatggagcca tagttgtagt tacttgaaca ttgttgcttg aagtgctgta
     8461 gcttgcacct aaaccaccag tacggtagct gtttgtgttg taactattat agttattgta
     8521 gttatatgat tgattattat ttgagtagtt gttgtaacgg ctgtagttat tgtagctata
     8581 accgttgttg taattgttat agttattgta accattgtag tagtaatagc tgtagtagcc
     8641 attatcttgg tttaattgac ttggatgcca gttacctttc catgtgtaat ggtagttacc
     8701 ttgtgcatca atagtgtaag tatagctata tgatgttggg tcgtttggat tataaccgta
     8761 gttatcttgc tcagaagcat gagcttgatt tcctgatgca attgcgattg tagcgaatcc
     8821 tgcagttgcg atagtagctg tagcgatttt cttcatttta aaaatatcct cctaaaaatt
     8881 ttaaatctaa aatattttcg taatgtccgt gtgacaaaat taatgttata agttatctct
     8941 cgtaattaaa cgacaagaaa gactataaca gaaattagcg tccttgtgtg ctttgttaac
     9001 gttttgtaat tttttgctaa tatcttgaca caatagaatt ttaaaagtat agaaatttgc
     9061 attttgcaaa acttataact acggcattct ttgtgaaaac tgaatgtttc gaaaataagt
     9121 ctgttacaaa tttgtaatat tactgaaaat tctaaatgta tattttgtgc ataatatagg
     9181 acttttaatc agaaaatgca taaaaattcg acacgaacga tcaagtttct atgattatga
     9241 aagctttggt atttggatga aaatgtatat ttaatggata aaatatccta atttagcata
     9301 aaaaaatgtt ttaataaaag tattatttga tataatcgat ttatgttttg ttactgctaa
     9361 aaaacatgtg gcgatataat tggtagtgaa tattagatgt tgacaattga tttgagaaag
     9421 acaaacagga gtaaatcaat atatttgtat atgtgaggat gtaagatgac agataattat
     9481 tcactacata tttataaaag tatgaaaatg agtagtgtga aggaagcgaa cttaaaaatt
     9541 atatattggc tacaaggtac aggtgtagtt tcaatcaatc tacaacaata tgatgtaaaa
     9601 agaaatgatg tcaccattat tatgttgaat gatttgtatc aaattgatgg taatgatgat
     9661 agtgtatgtt gtgttgttga agtaagtgca aagacatttt tgaagtttat gaatgcaaac
     9721 tatatgatgc gtggcaagat attaacaaat gaggttgcta gcacttttag aatcttgatt
     9781 aagtatttaa tctacagcaa aattaaacaa cagtcttata atgctaatga taagattatt
     9841 aattacatgt gtgttgaatt aatgtcatta aatacatacg atggtagtcg tcatttagta
     9901 gccgaagaag tgcacgatta tttaacaaac aaccaccata aaaagataaa taggaaagat
     9961 gtcattaatc aagttagtat tacaaacaaa gctttaagtg acatgtttaa agcgacacct
    10021 tatagtaatt ttattcaata tttaaatcat attagactgg agcattgctt aattgatatt
    10081 ttaacttcta agaagcctat tgaagaaatc gcaagtagtc atggttttaa tcattattct
    10141 cgttttatac acctctttaa agaaacgtat ggtaacactc ctaaattaat tagaaaaaga
    10201 tatagtccaa catctcattc aattaaccat tcccaattag ttgaaattga taaaaatata
    10261 attgaattat ttgatgatac taatcaaagt tcttcaagta tgcgcgagat tgatatacct
    10321 tttgagccta caaaaaggag tcaaatgtat caacctaaaa acatttatat taaaggaa
//
LOCUS       DALPQQ010000092        10201 bp    DNA     linear   BCT 22-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus strain K18-6-464
            SAMD00233528-rid16434743.denovo.092, whole genome shotgun sequence.
ACCESSION   DALPQQ010000092 DALPQQ010000000
VERSION     DALPQQ010000092.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMD00233528
            Sequence Read Archive: DRR236061
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 10201)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10201)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001543423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001543423.1
            Genome Coverage       :: 77x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/22/2022 17:09:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,811
            CDSs (total)                      :: 2,743
            Genes (coding)                    :: 2,689
            CDSs (with protein)               :: 2,689
            Genes (RNA)                       :: 68
            rRNAs                             :: 2, 4, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 4, 2 (16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 54
            CDSs (without protein)            :: 54
            Pseudo Genes (ambiguous residues) :: 0 of 54
            Pseudo Genes (frameshifted)       :: 27 of 54
            Pseudo Genes (incomplete)         :: 27 of 54
            Pseudo Genes (internal stop)      :: 10 of 54
            Pseudo Genes (multiple problems)  :: 10 of 54
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10201
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMD00233528-rid16434743.denovo.092"
                     /strain="K18-6-464"
                     /db_xref="taxon:1280"
                     /geo_loc_name="Japan: Niigata"
     gene            108..3070
                     /locus_tag="O7798_001917"
                     /pseudo
     CDS             108..3070
                     /locus_tag="O7798_001917"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501257.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="E domain-containing protein"
     gene            3454..4647
                     /locus_tag="O7798_001918"
     CDS             3454..4647
                     /locus_tag="O7798_001918"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501256.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HDC2864174.1"
                     /translation="MLYLEVLKNRNFTYLLIGNFLRRSCFVLFSLQIIWFTVELTNQS
                     SLKLSMMVMSQTLPFIIFGIFGGAYSDKHNKKEILYLSDLILSLIIIIIPLLAITSNL
                     NYLTLLTISTAITIINCYTDPAFRAILPEIIDEEHLATSNALIDSLQRGSNIILPALI
                     GVIVILVGNVGVFFICSILLFLGFIFNALLKYTNNNMIDRHSKEDFSETWEFLKQSKE
                     IPFIIIIQFACILINTGLWRVVLPLFISNILKEGVGVYGLATSCLGIASLLMSLIMGL
                     LSEKRLIFKFSIGVLVWGIGLSIINVFPSVAILYIGATLLGLGQSIEGLTRSVAIQIK
                     TPNHLMGKVFSISSTSNYAADTLSLGLISIIIPLLSLSNIFILGGVIISILSLAGLKF
                     VKKSM"
     gene            4628..4861
                     /locus_tag="O7798_001919"
     CDS             4628..4861
                     /locus_tag="O7798_001919"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501255.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDC2864175.1"
                     /translation="MLRSLCKHYRILINAIKVGIEMKYKISLAYNLAIIIGSLIILCI
                     LISRGYDIYVILIPILTILASLINLFCDIKKHK"
     gene            complement(4969..5277)
                     /locus_tag="O7798_001920"
     CDS             complement(4969..5277)
                     /locus_tag="O7798_001920"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501254.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDC2864176.1"
                     /translation="MTVNIVFSIVFCISMVILGIYVAITKDFTLISFINQTAIADKHK
                     NQIAYIFTLCISLSAVFLMSSILSFEYDFIALAFLFLTIALLLIALFYVCFYKITKYP
                     "
     gene            complement(5421..5687)
                     /locus_tag="O7798_001921"
     CDS             complement(5421..5687)
                     /locus_tag="O7798_001921"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501253.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDC2864177.1"
                     /translation="MKGSKQILLIMGIISLIVLFIFTLFIMAQYAKHYEQKSDSSNAH
                     TLNSSSAIIEQHTMSNLASLDLYAPVRNITSSRDIHPIYFMTKD"
     gene            complement(5971..7779)
                     /locus_tag="O7798_001922"
     CDS             complement(5971..7779)
                     /locus_tag="O7798_001922"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501252.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phospho-sugar mutase"
                     /protein_id="HDC2864178.1"
                     /translation="MHFHTHLLYNTCEKYCLGAVFFYFWGVFLYNSLHKCKGFSFHVL
                     LSLTEILKGCLATMDKELWIERANDSLVKHFYEQQSDIEQREGFESKLTFGTAGIRGK
                     FGLGEGRLNKFTIEKLALGLARYLNAQTNSPTIVIHYDIRHLSTEFAQIIANVLANHQ
                     ITVYLPDTYKTTPELSFAVRNLNTTAGIMITASHNPKDYNGIKVYGSDGAQLSTDASE
                     LASRYIEEVGDPLQIDIPISKQNTSYIKPFPKSVTDDYMKHIQNMIGYIPKSDLQVVF
                     TSLHGTSVPIVPELLQSLNFNQFNLVEAQCKPDPNFSSVQSANPEDHRAFDQAVELAN
                     KSHADLLISTDPDADRLGIAERDAHGHITYFNGNQIGALLLNYRIQQTSQLRHRLMIQ
                     SIVSSELTKSLARYNNVEYKEVLTGFKFIAQEIRQLDDHQNMIFAFEESYGFLSEPFV
                     RDKDAVQIVPLIIKYASELKLYGKTLKDELEQIYQTVGRHEDTLFSHTLEGFEGKKKI
                     NAIMTKFRSNPPQEIQGLKVKAIEDYLTSEVYHLDKDTTSQINSPKSNVIRVLFDEGF
                     IALRPSGTEPKIKLYVSLKCPNFDDVAQKINAMIFS"
     gene            7896..8288
                     /locus_tag="O7798_001923"
     CDS             7896..8288
                     /locus_tag="O7798_001923"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501251.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="(deoxy)nucleoside triphosphate
                     pyrophosphohydrolase"
                     /protein_id="HDC2864179.1"
                     /translation="MKKVINVVGAIIFSDNKILCAQRSEKMSLPLMWEFPGGKVEKNE
                     TEKDALIREIREEMKCDLIVGDKVITTEHEYDFGIVRLTTYKCTLNKELPTLTEHKSI
                     EWLSINELDKLNWAPADIPAVNKIMTEG"
     gene            8290..>10201
                     /locus_tag="O7798_001924"
     CDS             8290..>10201
                     /locus_tag="O7798_001924"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501250.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DEAD/DEAH box helicase family protein"
                     /protein_id="HDC2864180.1"
                     /translation="MSRLLNDFNQSLHKGFIDKHISHKGNYTPKLLVNNKNEKVLSTI
                     IDELQKCETFYFSVAFITESGLASLKAQLLDLSNKGVKGKILTSNYLGFNSPKMYGEL
                     LKLKNVEVRLTDIAGFHAKGYIFEHKDYSSMVIGSSNLTSNALKVNYEHNVLLSTMKN
                     GDLVDSVKSEFDLLWQKSTPLTEQWINSYKESFEYRSLEKLAEVEQTQMLLADKVKKS
                     VEIVPNLMQAEALRSLKAIRDKAKDKALIISATGTGKTILCALDVREVNPNKFLFIVH
                     NEGILNRAKEEFKKVLPIKNDSDFGLLTGKHRDVDAKYLFATIQTLSRDDNFKQFDEN
                     EFDYIVFDEAHRSAASTYQRVFNYFKPKFMLGMTATPERSDELSIFELFDYNIAYEIR
                     LQAALESDILCPFHYFGVTDYVHQGIKEDDVTKLRYLTSDERVNYIIQKTDYYGYSGE
                     ILQGLIFVSSKKEAYDLADKLSSKGIKSVALTGDDSVNYRQIVIEKLKEGKINYIITV
                     DLFNEGIDIPEVNQVVMLRPTESSIIFIQQLGRGLRKSSNKEYVTVIDFIGNYKTNYL
                     IPIALSGDQSQNKDNYKKFLTNNDSINGVSTINFEEVAKKQIYNSLDAVSLNQNKLIL
                     KAYEEVENRLGHM"
BASE COUNT         3830 a         1382 c         1839 g         3150 t
ORIGIN      
        1 tataaagata agtgttatat tccattgtgc aactcctatt gtatttgtaa aattacatgt
       61 aaattcactg taagtaaagt ggaaaatatg gaaaaaggag tatgcaaatg agagataaga
      121 aaggaccggt aaataaaaga gtagattttc tatcaaataa attgaataaa tattcaataa
      181 gaaaatttac agttggaaca gcatctattt taattggctc actaatgtat ttgggaactc
      241 aacaagaggc agaagcagct gaaaacaata ttgagaatcc aactacatta aaagataatg
      301 tccaatcaaa agaagtgaag attgaagaag taacaaacaa agacactgca ccacagggtg
      361 tagaagctaa atctgaagta acttcaaaca aagacacaat cgaacatgaa ccatcagtaa
      421 aagctgaaga tatatcaaaa aaggaggata caccaaaaga agtagctgat gttgctgaag
      481 ttcagccgaa atcgtcagtc actcataacg cagagacacc taaggttaga aaagctcgtt
      541 ctgttgatga aggctctttt gatattacaa gagattctaa aaatgtagtt gaatctaccc
      601 caattacaat tcaaggtaaa gaacattttg aaggttacgg aagtgttgat atacaaaaaa
      661 aaccaacaga tttaggggta tcagaggtaa ccaggtttaa tgttgataat gaaagtaatg
      721 gtttgatagg agctttacaa ttaaaaaata aaatagattt tagtaaggat ttcaatttta
      781 aagttagagt ggcaaataac catcaatcaa ataccacagg tgctgatggt tgggggttct
      841 tatttagtaa aggaaatgca gaagaatatt taactaatgg tggaatcctt ggggataaag
      901 gtctggtaaa ttcaggcgga tttaaaattg atactggata catttataca agttccatgg
      961 acaaaactga aaagcaagct ggacaaggtt atagaggata cggagctttt gtgaaaaatg
     1021 acagttctgg taattcacaa atggttggag aaaatattga taaatcaaaa actaattttt
     1081 taaactatgc ggacaattca actaatacat cagatggaaa gtttcatggg caacgtttaa
     1141 atgatgtcat cttaacttat gttgcttcaa ctggtaaaat gagagcagaa tatgctggta
     1201 aaacttggga gacttcaata acagatttag gtttatctaa aaatcaggca tataatttct
     1261 taattacatc tagtcaaaga tggggcctta atcaagggat aaatgcaaat ggctggatga
     1321 gaactgactt gaaaggttca gagtttactt ttacaccaga agcgccaaaa acaataacag
     1381 aattagaaaa aaagttgaag agattccatt caagaaagaa cgtaaattta atccggattt
     1441 agcaccaggg acagaaaaag taacaagaga aggacaaaaa ggtgagaaga caataacgac
     1501 accaacacta aaaaatccat taactggagt aattattagt aaaggtgaac caaaagaaga
     1561 gattacaaaa gatccgatta atgaattaac agaatacgga cctgaaacaa tagcgccagg
     1621 tcatcgagac gaatttgatc cgaagttacc aacaggagag aaagaggaag ttccaggtaa
     1681 accaggaatt aagaatccag aaacaggaga cgtagttaga ccgccggtcg atagcgtaac
     1741 aaaatatgga cctgtaaaag gagactcgat tgtagaaaaa gaagagattc cattcgagaa
     1801 agaacgtaaa tttaatccgg atttagcacc agggacagaa aaagtaacaa gagaaggaca
     1861 aaaaggtgag aagacaataa cgacgccaac actaaaaaat ccattaactg gagaaattat
     1921 tagtaaaggt gaatcgaaag aagaaatcac aaaagatccg attaatgaat taacagaata
     1981 cggaccagaa acgataacac caggtcatcg agacgaattt gatccgaagt taccaacagg
     2041 agagaaagag gaagttccag gtaaaccagg aattaagaat ccagaaacag gagatgtagt
     2101 tagaccaccg gtcgatagcg taacaaaata tggacctgta aaaggagact cgattgtaga
     2161 aaaagaagaa attccattcg agaaagaacg taaatttaat cctgatttag caccagggac
     2221 agaaaaagta acaagagaag gacaaaaagg tgagaagaca ataatgacgc caacactaaa
     2281 aaatccatta actggagaaa ttattagtaa aggtgaatcg aaagaagaaa tcacaaaaga
     2341 tccagttaat gaattaacag aattcggtgg cgagaaaata ccgcaaggtc ataaagatat
     2401 ctttgatcca aacttaccaa cagatcaaac ggaaaaagta ccaggtaaac caggaatcaa
     2461 gaatccagac acaggaaaag tgatcgaaga gccagtggat gatgtgatta aacacggacc
     2521 aaaaacgggt acaccagaaa caaaaacagt agagataccg tttgaaacaa aacgtgagtt
     2581 taatccaaaa ttacaacctg gtgaagagcg agtgaaacaa gaaggacaac caggaagtaa
     2641 gacaatcaca acaccaatca cagtgaaccc attaacaggt gaaaaagttg gcgagggtca
     2701 accaacagaa gagatcacaa aacaaccagt agataagatt gtagagttcg gtggagagaa
     2761 accaaaagat ccaaaaggac ctgaaaaccc agagaagccg agcagaccaa ctcatccaag
     2821 tggcccagta aatcctaaca atccaggatt atcgaaagac agagcaaaac caaatggccc
     2881 agttcattca atggataaaa atgataaagt taaaaaatct aaaattgcta aagaatcagt
     2941 agctaatcaa gagaaaaaac gagcagaatt accaaaaaca ggtttagaaa gcacgcaaaa
     3001 aggtttgatc tttagtagta taattggaat tgctggatta atgttattgg ctcgtagaag
     3061 aaagaattaa aataattcat aatttaaata atagttgatt tgcattcact atatttagtt
     3121 tgttaaaaac aacctagaat atgatgagaa tgatatacac cccaaaagtt ggattgaaag
     3181 acctaacttt aaggggtgta tttttgttat aaatttgatt tttttgataa tattttcata
     3241 tttaatataa tcataattag tagaatataa cctctgagta gtcattttgg gggttatgta
     3301 tggtgtttca agtagtatgt atatttcgaa ataattgata tttaactgac taaattatat
     3361 tagaattaat tgcgctttgg ataaagagag tttagaagaa ggtctaaaaa agctggtgga
     3421 tgcattcaat tatttttatg agaggtgata aatatgttgt atttagaagt tttgaaaaat
     3481 agaaacttta catatttatt gattggtaat ttcttacgtc ggagttgttt tgtgctgttt
     3541 tcgttacaaa taatttggtt tactgttgaa ttgacaaacc aatcatcttt aaaattatca
     3601 atgatggtta tgagtcaaac acttccattt attatatttg gtattttcgg tggcgcatat
     3661 tctgataaac ataataaaaa ggaaatactt tatctatctg atcttatact aagtttgatt
     3721 ataataatta ttcctttact tgcaataaca tcaaatttaa attatctgac gcttctaacc
     3781 atatctacag ctatcaccat tattaactgc tatacggatc ctgcgtttag ggcaattctt
     3841 cctgaaatta ttgatgagga gcatttagca acaagtaatg cgttaatcga tagtttgcaa
     3901 agaggctcaa atattatttt acctgcttta attggtgtca ttgtaatact agttggtaat
     3961 gttggcgtct tttttatttg tagtatattg ctatttttag gatttatttt taatgcactt
     4021 ttaaaatata caaataacaa catgattgat agacactcaa aagaagattt ttctgaaact
     4081 tgggaattct tgaaacaatc taaagaaatt ccatttatta taatcatcca atttgcctgc
     4141 atattgatta atactggcct ttggcgtgtt gtattaccat tgtttatttc caatatatta
     4201 aaagagggcg ttggtgtata tggactagct acatcatgtt taggtatagc atctttatta
     4261 atgtcattga ttatgggttt gctgtcagaa aagcgattaa tctttaaatt tagtattggt
     4321 gttttagttt ggggaattgg cttatcgatt attaatgtgt ttccaagtgt ggcgatatta
     4381 tatataggtg caacattatt gggacttgga caatctatag agggactaac aagatcagtt
     4441 gccattcaaa taaaaacgcc aaatcatttg atggggaaag tatttagtat ctcatctaca
     4501 tcgaattatg cagcggatac attgtcttta ggactgataa gtataattat acctttacta
     4561 agcttaagta atatatttat attaggaggt gtaattattt caatacttag cttagctggg
     4621 ttaaagtttg ttaagaagtc tatgtaaaca ttatagaatt ttaataaatg ctattaaggt
     4681 gggaattgaa atgaaatata aaattagttt ggcttataat ttagcaatta taatagggtc
     4741 gctaattata ttatgtatac taatatctag aggttatgat atttatgtaa tcttgattcc
     4801 aattttgact attttagcta gtttaatcaa tttgttttgt gatattaaaa agcataaatg
     4861 attctatatt aatgcaactt tgtattcgta caaggttgta tttttttcgc aaacaattac
     4921 ttactgacag cgcatcaata aatctaacca acacactatc acaaacattt atgggtattt
     4981 tgtaatttta taaaagcaaa cgtagaataa tgcgataagt aataatgcta tcgttaaaaa
     5041 taagaatgct aatgcaataa aatcatattc aaagcttaga attgaagaca ttaaaaatac
     5101 tgcactcaaa cttatacata gcgtaaatat atatgcaatt tggttcttgt gtttatctgc
     5161 aatggccgtt tgatttataa aagagattag tgtgaaatct ttagttattg cgacataaat
     5221 gcctaatata accatactta tgcagaatac gatactaaat acgatgttga cggtcattgt
     5281 tgcaccttcc tgatagaata taatgtactg tcttttagta atggatgcgt ttcttatata
     5341 tgtatgtttc taaaaaacag tacgttttta tcatttttta atttattagt tgaatgaatg
     5401 gggttatgaa aaaggaagtt ttaatctttt gtcatgaaat aaatgggatg aatatcacga
     5461 ctagaagtaa tgttacgaac aggagcgtat aaatctagag acgctaaatt cgacatagta
     5521 tgttgctcaa ttatggctga tgatgaattt aaagtatgtg cgttggaact gtcggatttt
     5581 tgttcataat gttttgcata ttgcgccatg atgaatagtg taaaaataaa taaaacaata
     5641 agagatataa tgcccataat caaaagtatt tgtttagagc ctttcattat ttcacatcct
     5701 ttctaaaata tatttgtaac taaatttaaa atagttattt ttgtaattct aaaccttttt
     5761 catcgcgaaa acaattaaat aggtcgcggt attaattatt atattattac cgcttaatat
     5821 gaaaaataca tgaaaattaa ttttctaata tacttttgaa aaattattac aaattagccc
     5881 cttcaaaacg cgaaaacata aggattctag tttcaaaagg gctgataagc ataaaatgaa
     5941 atgtaatatt tcgatgtata aaatttttaa ttagctaaaa atcatcgcat taattttttg
     6001 agctacatca tcaaaattcg gacattttaa cgacacatat aatttaattt taggttcagt
     6061 accagaagga cgtaaagcga taaatccttc gtcaaataag acacgaataa catttgattt
     6121 aggagaatta atctgcgacg ttgtatcttt atccaaatga taaacctcgc tagttaaata
     6181 atcttcaatt gctttcactt tgagtccttg aatctcttgc ggtggatttg aacggaattt
     6241 ggtcattatt gcattaattt tctttttccc ttcaaatcct tctagcgtat gcgagaataa
     6301 tgtatcctca tgtctaccaa cagtttgata aatctgttct aattcatctt tcaatgtttt
     6361 gccatataat tttaactcag aagcgtattt tataatgagt ggcacaattt gtacggcatc
     6421 tttatcacgt acaaaaggct ctgatagaaa accgtaactc tcttcaaatg cgaaaatcat
     6481 attttgatga tcatccagtt gtcttatttc ctgagcaata aatttaaagc ccgtcagcac
     6541 ctctttgtat tcaacattat tatagcgtgc taatgacttt gttaactcac tacttacaat
     6601 agattgaatc attaagcggt gacgtaattg agacgtttgt tgaatacgat aattaagtaa
     6661 cagcgcacca atttggttgc cattaaaata tgtgatatga ccgtgtgcat cacgttcagc
     6721 aataccaagt cgatctgcat cagggtcagt tgatattaat aagtctgcat gacttttatt
     6781 tgcaagttcg actgcttgat caaaagcgcg atgatcttca ggattagcac tttgaactga
     6841 gctgaaattc ggatcaggtt tacattgtgc ttctacaaga ttaaattgat tgaaattcaa
     6901 agattgtaat aactcaggta caatcggaac acttgtacca tgcaaactag tgaacacaac
     6961 ttgtaaatca gatttaggaa tatagccaat catattttga atgtgtttca tatagtcatc
     7021 agttacagat ttcggaaaag gcttgatata agatgtattt tgtttagaaa taggtatatc
     7081 aatctgtaat ggatcgccaa cttcttcgat ataacgactt gcaagctcag atgcatcagt
     7141 cgataattgc gcaccatcag aaccatatac tttgatgccg ttatagtctt tcggattatg
     7201 acttgctgta atcataatgc cagcagtagt attaagattg cgcaccgcga acgataattc
     7261 cggtgtcgtt ttatatgtat caggtaaata aactgttatt tgatggtttg ctaatacatt
     7321 agcaattatt tgggcgaatt cagttgaaag atgtctaata tcataatgaa tgactattgt
     7381 tggactgttt gtttgggcat ttaaataacg cgctaaacct aatgccaatt tttcaatagt
     7441 aaacttatta agtcgacctt caccaagacc gaattttccg cgtatacccg cagtaccaaa
     7501 tgttaattta ctttcaaaac cttctcgctg ttcaatgtca gattgctgct cataaaaatg
     7561 tttaactaaa ctatcattag ctcgttctat ccataattct ttatccattg ttgctaaaca
     7621 tcctttcaaa atctcagtta gacttaataa aacatgaaaa ctaaagccct tacatttatg
     7681 taatgaatta taaagaaata cgccccaaaa gtaaaaaaac acagccccaa gacaatactt
     7741 ttcacaagta ttatataata gatgtgtatg aaaatgcatg gagtagagcg ttcatgtgaa
     7801 tgtaaaatat taatttttaa tattgattta tatatagttt tgtaattttt gatagaataa
     7861 caattaagat gattttaaat tgaagggtga gtcttatgaa aaaagtaatc aatgtagtag
     7921 gagctattat tttttctgat aacaaaattc tttgtgcaca gagaagtgaa aaaatgagtc
     7981 tgcctttaat gtgggaattt cctggcggta aggttgaaaa gaatgaaact gaaaaagacg
     8041 ctttgattag agaaattaga gaagaaatga aatgtgattt aattgttgga gacaaagtta
     8101 taactacaga acatgaatat gattttggaa ttgttaggtt aacaacatac aaatgtactt
     8161 taaacaaaga gttaccaact ctaactgaac ataagagtat tgaatggttg tcaataaacg
     8221 aacttgataa attaaattgg gccccagcgg atataccagc cgttaataaa attatgactg
     8281 agggataata tgagtagatt actaaatgat ttcaatcaat ctttacataa agggtttata
     8341 gacaaacata tttctcataa agggaattat acaccgaagc ttttagtaaa taataaaaat
     8401 gaaaaagttc tttcaacaat tatagatgaa cttcaaaaat gtgaaacgtt ttatttttct
     8461 gtggctttta taacagaaag cggtttagcc agcttaaagg ctcaactatt agatttaagc
     8521 aataagggtg ttaaagggaa aatattaaca tctaattact tagggtttaa tagtcctaaa
     8581 atgtatggag aattacttaa attaaaaaat gtagaggtaa gattaactga tattgctgga
     8641 ttccatgcca aaggatatat ttttgagcat aaggattata gttctatggt aataggaagc
     8701 tctaatttaa catctaatgc gttaaaggtt aattatgagc ataatgtttt actgtctact
     8761 atgaaaaatg gcgatttagt tgatagtgta aaaagtgaat ttgacttgtt atggcaaaag
     8821 agtaccccac tgactgagca atggattaat tcatataaag aatcatttga gtaccgttcc
     8881 ttagaaaaat tagcggaggt tgaacaaact caaatgctgc tagctgataa ggtgaaaaaa
     8941 tcagtggaaa ttgtacccaa tttaatgcaa gcagaagcat taaggtcatt aaaagctatt
     9001 agggataaag ccaaagataa ggcgttaata atatctgcaa ctggtacagg taaaacgatt
     9061 ttatgtgcat tagatgttag agaagtaaac cctaataaat ttttatttat tgttcataat
     9121 gaggggattt taaatagagc taaggaagaa tttaaaaaag tattacctat aaaaaatgat
     9181 agtgattttg gattgttgac aggaaaacat agagatgtcg atgccaaata tttatttgca
     9241 accattcaaa cattatctag agatgataat tttaagcaat ttgatgaaaa tgaatttgat
     9301 tatattgttt ttgatgaagc acatcgttct gctgcatcta cttatcaacg agtatttaac
     9361 tacttcaaac ctaagttcat gctgggaatg actgctacac cagaaagatc agatgaatta
     9421 agtatatttg aactgtttga ttataatatt gcatatgaaa taaggttaca agcagcatta
     9481 gaaagtgata ttttatgtcc atttcattat tttggtgtga ctgattatgt acatcaaggt
     9541 attaaagaag atgatgtaac taaactgaga tatttaactt ctgatgaaag agttaattat
     9601 attattcaaa agacagatta ctatggatat tcaggtgaaa ttttacaagg attgattttt
     9661 gtaagtagca aaaaagaagc ttatgattta gcggataaac taagttcaaa agggattaaa
     9721 agtgttgctt taacaggaga tgatagtgtt aattatcgcc aaattgtaat agaaaaatta
     9781 aaagaaggta agattaacta tattataact gtagatcttt ttaacgaagg tattgatatt
     9841 ccagaagtca atcaagttgt aatgttgaga ccaacagagt ctagtattat attcattcag
     9901 caacttggta gaggattaag aaaaagttca aataaagagt atgttacagt aattgatttt
     9961 attggtaatt ataagacaaa ttatttaatt ccgattgcgc tttctgggga tcaatcgcaa
    10021 aataaagata attataagaa gtttttaacg aataacgatt cgattaatgg agtatctaca
    10081 attaattttg aagaagttgc taaaaaacag atttacaatt cattggatgc agtatcatta
    10141 aatcaaaata aattaatatt aaaagcttat gaagaagttg aaaatagatt gggacacatg
    10201 c
//
LOCUS       DALPQQ010000093        10093 bp    DNA     linear   BCT 22-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus strain K18-6-464
            SAMD00233528-rid16434743.denovo.093, whole genome shotgun sequence.
ACCESSION   DALPQQ010000093 DALPQQ010000000
VERSION     DALPQQ010000093.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMD00233528
            Sequence Read Archive: DRR236061
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 10093)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10093)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001543423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001543423.1
            Genome Coverage       :: 77x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/22/2022 17:09:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,811
            CDSs (total)                      :: 2,743
            Genes (coding)                    :: 2,689
            CDSs (with protein)               :: 2,689
            Genes (RNA)                       :: 68
            rRNAs                             :: 2, 4, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 4, 2 (16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 54
            CDSs (without protein)            :: 54
            Pseudo Genes (ambiguous residues) :: 0 of 54
            Pseudo Genes (frameshifted)       :: 27 of 54
            Pseudo Genes (incomplete)         :: 27 of 54
            Pseudo Genes (internal stop)      :: 10 of 54
            Pseudo Genes (multiple problems)  :: 10 of 54
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10093
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMD00233528-rid16434743.denovo.093"
                     /strain="K18-6-464"
                     /db_xref="taxon:1280"
                     /geo_loc_name="Japan: Niigata"
     gene            152..961
                     /gene="sgtB"
                     /locus_tag="O7798_001925"
     CDS             152..961
                     /gene="sgtB"
                     /locus_tag="O7798_001925"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500509.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="monofunctional peptidoglycan glycosyltransferase
                     SgtB"
                     /protein_id="HDC2864181.1"
                     /translation="MKRSDRYSNSNEHFEHMKHEPHYNTYYQPVGKPPKKKKSKRILL
                     KILLTILIIIALFIGIMYFLSTRDNVDELRKIENKSSFVSADNMPEYVKGAFISMEDE
                     RFYNHHGFDLKGTTRALFSTISDRDVQGGSTITQQVVKNYFYDNDRSFTRKVKELFVA
                     HRVEKQYNKNEILSFYLNNIYFGDNQYTLEGAANHYFGTTVNKNSTTMSHITVLQSAI
                     LASKVNAPSVYNINNMSENFTQRVSTNLEKMKQQNYINETQYQQAMSQLNR"
     gene            1222..2040
                     /gene="recX"
                     /locus_tag="O7798_001926"
     CDS             1222..2040
                     /gene="recX"
                     /locus_tag="O7798_001926"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500508.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="recombination regulator RecX"
                     /protein_id="HDC2864182.1"
                     /translation="MPKITKIEVQKKNKERFNLFLDEQFEMGIDIDTLVKFNLKKGQQ
                     LEAADMAEIQKYDHYRIGLNKAIQYLSYKKRTEKEVIQYLQKEEISEQAISEVIEYCY
                     REKLIDHQDYAESLKNTMIRTTDKGPKIYQQKLYQLGIEPNIIEIFTELYREQQELDD
                     IIQIAEKISKTKKGPQNKVKEKVMQSLIQKGFEMETIHAVLNEMDFTQDEAVLDDLLQ
                     RDLEKIYNKNRKKYTQQKLISKTIEGLMRKGYKYDKIKAKLEESGIADGTEEIE"
     gene            2018..2332
                     /locus_tag="O7798_001927"
     CDS             2018..2332
                     /locus_tag="O7798_001927"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000435810.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YfhH family protein"
                     /protein_id="HDC2864183.1"
                     /translation="MEQKKLSEMSEPELRHEIQLYKEKMRKAEMNGILNEYDVYQSKV
                     IVAESYLVDRKKIENGKIYKLTDGSNQYFKVERLKGIFAWGFRFNSDEPEEGLPIALL
                     QL"
     gene            2347..3864
                     /locus_tag="O7798_001928"
     CDS             2347..3864
                     /locus_tag="O7798_001928"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500506.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HDC2864184.1"
                     /translation="MGSSIVLKLLKVTHYYRNKQNKKWYLPFGYDAEDIDLNNISLHI
                     YQGEALGIIGEPESSKALVGQLLAGAIKPDKGKVVCTEDLFYGYIEDQSLIHQTVEAY
                     TAQLVQLFPYEINDHKAEQIIQYAHLGDYKTKPVNHISKAAYAQLLLSIARSSKSNII
                     ILNHVIDYLTPQFMERAIELTNDYIENNLTIVSIGDDIDKISQVSNYIAWFSHGQLRM
                     EGSLKQVIPSFKEHERDRLSLNSKEEIENFDLDWKKNRTRIPEMTYNFKRVERYNHAK
                     PPKFLVRFWTLASGTILGLALMMLLIFNNIGIISITDFTNRATMQNENKDPYGEKLAY
                     GIAFNGSVDMQGDKQVTIPKYSVVTITGENSKNYRVTADNKTYYVSKDKLEYFNPAGL
                     YQTHSFKKLAPYMKSNYSNYYAYFNSQLHKKHSSVIKTLVPDDDNRFVASVTQQPIQL
                     LFNDNNQLYGFVYPIVDKKELKDKFNINNNIWITKVGNGYCIANLKEDKWIYIEL"
     gene            3873..4709
                     /locus_tag="O7798_001929"
     CDS             3873..4709
                     /locus_tag="O7798_001929"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500505.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDC2864185.1"
                     /translation="MLDNIILYFKNLPHTKRYVTERLKQSWKSFLIVLAACLILIIAS
                     ETLFSFSHLTDVKEVRWLFRIIVLIVFAVVMFTIYISYHHYMNDFLVTKLFNISAATP
                     VVIMSILSFIMLVILTMISALVKPVNFETSYIALFYFIVMATIFVGLISVTFGLIRLL
                     TEKINIIFYGVCVLCFLLLPIIFIPNPNHVFINHILMLNPMYYIVNGIAQSIIFGISS
                     MENIPYHFYFILFLCLIAAVNFVLARYTTHAIYNKTSKVTQTDNQQDVSNDSTDEADT
                     SS"
     gene            complement(4970..5947)
                     /locus_tag="O7798_001930"
     CDS             complement(4970..5947)
                     /locus_tag="O7798_001930"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500503.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metal-dependent hydrolase"
                     /protein_id="HDC2864186.1"
                     /translation="MDTATHIAIGVGLTALATQDPAMASTFGATATTLIVGSLIPDGD
                     TVLKLKDNATYISHHRGITHSIPFTILWPILITFLIFTFFSGTNPFHVWMWAQLAVFL
                     HVFVDIFNSYGTQALRPITNKWIQLSVINTFDPIIFTVLCIGIVLWVIGLHPFAVFFP
                     IIALLIIYYMIRFKMRAVIKQQALKAIQQEHHPVKVFVAPTIKFMEWRVAIQTDAHDY
                     VGKAYGRNVVFSDKVERQTLSTDSILWKVKGNKDIRTFLNFSSIYRWQTTTLADGSTE
                     IRLIDLRYLKNDHYSFVAIAHVTNDNVIDHSYIGWVFTEDKLQRKLYAK"
     gene            6099..7136
                     /gene="mutY"
                     /locus_tag="O7798_001931"
     CDS             6099..7136
                     /gene="mutY"
                     /locus_tag="O7798_001931"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500502.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="A/G-specific adenine glycosylase"
                     /protein_id="HDC2864187.1"
                     /translation="MYQQSSFKENLIHWFDENQREMPWRQTTNPYYIWLSEVMLQQTQ
                     VKTVIDYYHRFVERFPTVEVLSQASEDEVLKYWEGLGYYSRARNFHTAIKEVHDKYEG
                     LVPKDPDQFKALKGVGPYTQAAVMSIAYNVPLATVDGNVFRVWSRLNDDYRDIKLQST
                     RKSYEQELLPYVTTEAGTFNQAMMELGALICTPKNPLCLFCPVQENCEAFDKGTFEKL
                     PVKSKNVSKKVIEQSVFLIRNNQGQYLLQKRSEKLLHGMWQFPMFESEHARRKMTEKI
                     GHDIQPVETPIFELKHQFTHLTWKIKVYAVSGAINIETLPDDMIWFDLSDRDQYTFPV
                     PMSKIYQFING"
     gene            7438..7980
                     /locus_tag="O7798_001932"
     CDS             7438..7980
                     /locus_tag="O7798_001932"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500501.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF402 domain-containing protein"
                     /protein_id="HDC2864188.1"
                     /translation="MVRESIPKEGENIKIQSYKHDGKIHRVWSETTILKGTDHVVIGG
                     NDHTLVTESDGRTWITREPAIVYFHSEYWFNVICMFREDGIYYYCNLSSPFVCDEEAL
                     KYIDYDLDIKVYPNGKYHLLDEDEYEQHMNQMNYPHDIDIILRRNVDILQQWIEQKKG
                     PFAPDFIKVWKERYKKIRQY"
     gene            8271..10007
                     /locus_tag="O7798_001933"
     CDS             8271..10007
                     /locus_tag="O7798_001933"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500500.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SAV1866 family putative multidrug efflux ABC
                     transporter"
                     /protein_id="HDC2864189.1"
                     /translation="MIKRYLQFVKPYKYRIFATIIVGIIKFGIPMLIPLLIKYAIDGV
                     INNHALTTDEKVHHLTIAIGIALFIFVIVRPPIEFIRQYLAQWTSNKILYDIRKKLYN
                     HLQALSARFYANNQVGQVISRVINDVEQTKDFILTGLMNIWLDCITIIIALSIMFFLD
                     VKLTLAALFIFPFYILTVYVFFGRLRKLTRERSQALAEVQGFLHERVQGISVVKSFAI
                     EDNEAKNFDKKNTNFLTRALKHTRWNAYSFAAINTVTDIGPIIVIGVGAYLAISGSIT
                     VGTLAAFVGYLELLFGPLRRLVASFTTLTQSFASMDRVFQLIDEDYDIKNGVGAQPIE
                     IKQGRIDIDHVSFQYNDNEAPILKDINLSIEKGETVAFVGMSGGGKSTLINLIPRFYD
                     VTSGQILIDGHNIKDFLTGSLRNQIGLVQQDNILFSDTVKENILLGRPTATDEEVVEA
                     AKMANAHDFIMNLPQGYDTEVGERGVKLSGGQKQRLSIARIFLNNPPILILDEATSAL
                     DLESESIIQEALDVLSKDRTTLIVAHRLSTITHADKIVVIENGHIVETGTHRELIAKQ
                     GAYEHLYSIQNL"
     gene            10016..>10093
                     /locus_tag="O7798_001934"
     CDS             10016..>10093
                     /locus_tag="O7798_001934"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500499.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDC2864190.1"
                     /translation="MFDFSTILKRKFVTGWWGHNIEKAVR"
BASE COUNT         3718 a         1346 c         1780 g         3249 t
ORIGIN      
        1 ataatttttt caaaaaacaa aaaagtaagt atgatggcgt atacgattgt aagcccttgg
       61 actgattttc ccaaaaagtg tagcctattt gtgatagtac tggtaaactc aaggtatata
      121 ctaagtgagt tttaaaagaa ggagcaaacg catgaaaaga agcgataggt actcaaactc
      181 aaatgaacat tttgagcata tgaaacacga acctcactat aatacgtatt atcaaccagt
      241 tggcaaaccg ccgaaaaaga aaaaaagtaa acgaatacta ttaaaaatat tattaaccat
      301 tctaatcatt atcgcattgt ttattggtat catgtatttt ttatctacac gcgataatgt
      361 ggatgaacta agaaaaattg aaaataaaag tagttttgtg tcagctgata acatgccaga
      421 gtatgttaaa ggtgccttta tttcaatgga agatgaacga ttctacaatc atcatggatt
      481 cgatttgaaa ggtacaacta gagctttatt ttcaacgatt agcgacagag atgtgcaagg
      541 tggtagtacc attacacaac aagttgtcaa aaattatttt tatgataatg atcgttcatt
      601 tactagaaaa gtaaaagaat tatttgtagc tcatcgagtt gaaaaacaat ataataagaa
      661 cgaaatttta agcttttatt taaataatat ttactttggg gataatcaat atacgcttga
      721 gggcgcagca aaccattact ttggaacaac cgtgaataaa aatagtacaa caatgtctca
      781 cataacagtt ttacaaagcg ctattttagc tagtaaagtc aatgcaccta gcgtatataa
      841 tatcaataat atgtcagaga attttacgca acgtgtaagc acgaacttag aaaaaatgaa
      901 gcaacaaaat tatatcaatg aaacacaata tcaacaggct atgtcacaat taaatcgtta
      961 aatacttgca ttcatgtgta agatgcttgg aactataatg tagaaggttt aattgaaatg
     1021 tcataatgat aaagttgaat tgtttctgct ttataaattt tacagatttg cttgtaatca
     1081 cactttcatt ttaaaagatg atagtgtgat tttttgttag catcgaaaaa tatttaaagt
     1141 taaacatttg ctataggaag tggcttattg aataataaaa gagtattgta ttaaaactta
     1201 agaaagtaac ggggtgatcc agtgccgaag attactaaaa tagaagttca aaagaaaaac
     1261 aaagaacggt ttaatctttt tttagacgaa caatttgaaa tgggtataga tattgataca
     1321 ttagtcaaat ttaatttaaa aaaagggcaa caacttgaag ctgctgacat ggcagagatt
     1381 caaaagtatg atcattatcg cataggttta aataaagcaa tccaatattt atcatataaa
     1441 aagagaactg aaaaagaagt tatacaatat ttacaaaaag aagagatatc agagcaagcg
     1501 atttctgaag tgattgaata ttgttatcgc gaaaagttaa tcgaccatca agattatgcg
     1561 gaaagtttaa aaaatacaat gattcgcacg acagataaag gacctaaaat ttatcaacaa
     1621 aaactatatc aacttggtat agaaccaaat atcattgaaa tatttacaga actttataga
     1681 gaacaacagg aacttgatga tattatccaa attgctgaaa aaatatctaa aacaaaaaaa
     1741 gggccacaaa ataaagttaa agaaaaagta atgcaatctt taattcaaaa agggtttgaa
     1801 atggaaacca ttcatgctgt attgaatgaa atggatttta cacaagatga agcggtttta
     1861 gacgatttat tacaacgaga tttagaaaaa atttataata aaaatcgaaa gaagtacacg
     1921 caacagaaat taatttcaaa aactatcgaa ggccttatga gaaaaggata taaatatgat
     1981 aaaattaaag ctaaattaga agaaagtggt attgccgatg gaacagaaga aattgagtga
     2041 gatgtctgag ccagaattaa gacacgaaat acaactttat aaagagaaaa tgagaaaagc
     2101 tgagatgaat ggtattttaa atgaatatga cgtttatcaa agtaaagtaa ttgttgccga
     2161 aagttactta gtagacagaa aaaagataga aaatggtaaa atttataaac tgactgatgg
     2221 cagtaatcaa tattttaaag tagaaagatt aaaaggtatt tttgcgtggg ggtttagatt
     2281 taatagcgat gaacccgaag aaggattacc tatagcgtta ttacaattat agaaggatga
     2341 aaatagatgg gaagttcaat tgttttaaag ttactaaaag taacacacta ctataggaat
     2401 aaacagaata agaaatggta tttacctttt ggatatgatg ctgaagatat cgatttaaac
     2461 aatattagtt tacatattta tcaaggagaa gcattaggta taattggtga acctgaatct
     2521 tccaaagcgt tggtaggtca attgttggca ggtgcaatta aacctgataa aggtaaagta
     2581 gtttgtactg aagatttgtt ctacggatat attgaagatc aatcgttaat tcatcaaact
     2641 gttgaagctt atacagcgca gttagttcaa ctatttccat atgaaattaa tgatcataaa
     2701 gctgaacaga ttattcaata tgcacattta ggtgattata aaacgaagcc ggttaaccat
     2761 atttcgaaag cggcatacgc tcaattacta ttaagtattg cacgctcatc aaaatcaaat
     2821 attattattt taaatcatgt tattgactat ttaacaccac aatttatgga acgtgcgatt
     2881 gaattaacaa atgattatat tgaaaataat ttaacgattg tgtcaattgg tgatgatatt
     2941 gataaaattt cacaagtgag taactacata gcttggtttt cacatggtca attaagaatg
     3001 gaagggtcac ttaaacaagt tattccatct tttaaagaac atgaacgtga tcgattaagt
     3061 ctaaactcaa aagaagaaat tgaaaacttt gatttagatt ggaaaaagaa tcgtacaaga
     3121 ataccagaga tgacctataa tttcaaacgt gttgagcgct ataatcatgc aaaaccgcct
     3181 aagtttttag tgcgtttttg gactttagcc tcaggtacta ttttaggctt agcattgatg
     3241 atgttgctca ttttcaataa tataggaatt atttcgataa cagattttac gaatcgtgct
     3301 acgatgcaaa atgaaaataa agatccatat ggcgaaaagt tagcttatgg aattgctttt
     3361 aatggcagtg tggatatgca aggggataaa caagtcacaa ttccaaaata tagtgtagtt
     3421 acaattactg gcgaaaatag taaaaattat cgtgttaccg ccgataataa gacttactat
     3481 gttagtaaag ataaattaga atattttaac ccggcaggtt tatatcaaac gcatagtttt
     3541 aaaaaattag caccatatat gaaatcaaat tatagtaatt actatgcata ctttaatagt
     3601 caattacata aaaagcatag ttcagttata aaaactttag ttcctgatga tgataaccgt
     3661 ttcgttgcat ccgttacaca acaaccgata caattacttt tcaatgataa taatcagtta
     3721 tacggttttg tttatccaat tgtagataaa aaagaattaa aagataagtt taatattaac
     3781 aataacattt ggattactaa agttgggaat ggatattgta ttgccaattt gaaagaagac
     3841 aaatggattt atattgaatt gtaggtgtaa agatgctaga taatattatt ttatatttta
     3901 aaaacttacc gcatactaaa aggtatgtaa cagaacgttt aaaacaaagt tggaaaagtt
     3961 ttctaatcgt attagctgca tgtttaatac ttattattgc aagtgaaacg ctattttcct
     4021 ttagtcattt gaccgatgtt aaagaggtga gatggttatt tagaatcatt gtattgattg
     4081 tttttgcggt agtgatgttc acaatttata tctcttatca tcattatatg aatgactttt
     4141 tagttactaa gttatttaat atttccgcag cgacgccagt agttattatg tctattttaa
     4201 gttttattat gctagtcatt ttgacgatga ttagtgcatt ggttaaacca gtaaacttcg
     4261 aaacatcata tatagcgcta ttctatttta ttgtgatggc aactattttt gtaggattaa
     4321 tatccgttac ttttggtctt attcgactgt taactgaaaa aataaatatc atattttatg
     4381 gggtttgtgt attgtgtttc ttattgttac caattatttt cataccaaat ccaaatcatg
     4441 tatttatcaa tcacatccta atgctaaatc caatgtatta cattgttaat ggtatagcac
     4501 aatctatcat atttggtata tcaagtatgg aaaacattcc atatcatttt tactttattt
     4561 tattcttatg tttaatagct gcagtaaatt tcgtattagc aaggtatacg acacacgcaa
     4621 tttataataa aacatctaaa gtgacacaaa ctgataatca acaggatgtt tcaaatgata
     4681 gtacagacga ggcggatact tcttcatgat gtttagctga cctgttgtgt aaattaatct
     4741 gtgagaatca gaaacaatta gaatatcatc tagatattgt tttcctatac tgattttgat
     4801 atttcgagtc attaaaggta gtttgttagc aacaatataa attttagatt ttgtaaaagc
     4861 attcatagtt ttacattaaa aaaccggaca gagtaaaaat cgttttgatt ttcattctgc
     4921 ccggttgttc attttttata gattaacttt agtgaataat aacttgaaat tatttagcat
     4981 acagtttacg ttgtaactta tcttctgtaa atacccagcc aatataagag tggtctatga
     5041 cattatcgtt tgttacatgt gcaattgcca caaatgaata atgatcattt tttaaataac
     5101 gcaaatcaat caaacgaatt tcagtagaac catctgctaa cgttgttgtt tgccaacgat
     5161 agattgatga aaagtttaaa aaagtacgta tatctttatt acctttgact ttccataaaa
     5221 tggagtctgt tgataatgtt tgacgttcca ctttatcact aaacaccaca ttcctaccat
     5281 atgcttttcc aacatagtca tgtgcatcag tttgtatcgc gacacgccat tccataaatt
     5341 ttattgttgg cgcaacaaat actttaacag ggtgatgctc ttgttgaatt gcttttaaag
     5401 cttgttgctt aattacggct ctcattttaa aacgaatcat gtaataaatg attagtaaag
     5461 cgattatagg aaagaagact gcaaatggat gcaagcctat aacccataat acaataccaa
     5521 tacaaagaac tgtgaaaata atagggtcaa atgtgttaat cacacttaat tgaatccatt
     5581 tgtttgtgat aggtctaagc gcttgtgtac cataagaatt gaatatatct acaaagacat
     5641 gtaaaaatac tgcgagctga gcccacatcc atacatgaaa tgggttggtt ccactaaaga
     5701 acgtgaatat taaaaatgta attaaaattg gccatagtat tgtgaaaggg atggaatgcg
     5761 tgatacctct atgatgcgaa atatatgttg cattgtcctt taatttaaga acagtatccc
     5821 catcaggaat taatgaacca acgataaggg ttgtagctgt tgcaccaaac gtagaagcca
     5881 ttgctggatc ttgagttgca agtgctgtaa ggcccacccc aattgcgata tgtgttgcag
     5941 tgtccatatc agttcactca tttcataata ttatatatac tattataatc caatttcgca
     6001 aataactaaa ttaacttaca tactaaccat gattttaatg tacaataaaa acattatgag
     6061 taaagacaat taattttggt gaggaaaggg ttttataaat gtatcagcag tctagtttta
     6121 aagaaaattt gatacactgg tttgatgaaa atcaaagaga aatgccatgg cgacaaacga
     6181 ccaatccgta ctatatttgg ttaagtgagg tcatgttaca acagacacaa gttaaaacag
     6241 ttattgacta ttatcatcgt tttgttgaac gatttccaac tgtggaagtt ttgagtcaag
     6301 cttcggaaga tgaagtgtta aagtattggg aaggcttagg atattatagt agagctcgaa
     6361 attttcatac ggcgattaaa gaagttcatg ataaatatga aggcttagtt cccaaagatc
     6421 ctgatcaatt taaagcgtta aaaggtgttg gcccatacac acaagctgca gtaatgagca
     6481 ttgcatataa tgtaccacta gcaactgtag acggaaatgt ttttcgagta tggtctagat
     6541 tgaatgatga ctatcgagat attaaattac aatcgacgag gaaatcgtac gaacaagaat
     6601 tattaccgta tgttactaca gaagctggaa cgtttaatca agctatgatg gaattagggg
     6661 cgttaatttg tacaccaaaa aatccattat gcttattttg tccagttcaa gaaaactgtg
     6721 aggcatttga taaaggtaca tttgaaaagt tacctgttaa atctaaaaat gtaagtaaaa
     6781 aagtaattga gcaatccgtc tttttaatta gaaataatca aggtcaatat ctgttgcaaa
     6841 agcgtagcga aaaattattg catggtatgt ggcaatttcc tatgtttgaa agtgagcatg
     6901 ctagacgtaa aatgactgaa aaaatcggtc atgacattca accagtagaa acacctattt
     6961 ttgagttgaa gcatcaattt actcatttaa catggaagat taaagtatac gccgtttcag
     7021 gagcaattaa cattgaaaca ttaccagatg acatgatttg gtttgattta agtgatcgag
     7081 atcaatatac attccctgta cctatgtcaa agatttatca atttataaat gggtaacatt
     7141 cgatgattgg taatattatc ggaaaacata gtgacattaa ttttaaaaag tataaatgat
     7201 atctttaaat ctcatagaat aacaatgtca aaaagttaaa gtgttgatat ataaaagtga
     7261 tgattttata tactttaaat gggacatgta aatctctgtt gtagtactta gcaatattac
     7321 cgagtttaat tattaagtag taaaatctta tttcgtaaaa atatgtattt atataatact
     7381 atttctgaaa tatgctataa tttataatgg ttaaattaac agaaggtggt gtggagtatg
     7441 gtcagagaat ccatacctaa agaaggggaa aacattaaaa ttcagagtta taaacatgat
     7501 ggtaagattc atcgcgtttg gtctgaaaca acaatattaa agggtactga tcatgttgtc
     7561 attggtggaa atgatcatac gttagtgact gaaagtgacg gaagaacttg gataacacgt
     7621 gaaccggcaa ttgtttactt tcactcagaa tattggttta atgttatctg catgtttaga
     7681 gaagatggaa tttattacta ttgcaatttg tcatcaccat ttgtttgtga tgaagaggca
     7741 ttaaaatata tagactatga tttagatatt aaagtatatc caaacggaaa gtatcattta
     7801 ttagatgaag atgaatatga gcaacatatg aatcaaatga attatccgca tgatattgat
     7861 attattttaa gacgcaacgt ggacattctt caacaatgga tagaacagaa gaagggccca
     7921 ttcgcgccag attttatcaa agtttggaaa gaacgttaca aaaaaattag acagtattaa
     7981 gcaaataaag tgtaaatact gattaaatca tttatattga cttagtgatg taaagaagta
     8041 tgataacttt tgctgtcgtg tggggacaca gtatccatag attaaattga atagaatata
     8101 acatacgaat aagacaacgt atttaatcac atgaatatga cagaggttga gatatcttaa
     8161 ttttaaaaat gtaaattgta agaagaattt acatctacaa attatgtatc caacctctat
     8221 tcatttttat gcttatgaat aggatagggc aatagattag gggggattgt atgattaaac
     8281 gatatttgca atttgttaag ccatacaaat atcgtatttt tgcaacgatt attgttggga
     8341 taattaagtt tggtatacca atgcttatac cactattaat taaatatgca atagatggcg
     8401 tgattaataa ccacgcacta acgactgatg aaaaagttca tcatttaact attgccattg
     8461 gtatcgcatt atttattttt gtaatagtga gaccaccaat tgaatttata cgtcaatatt
     8521 tggcgcaatg gacaagtaat aaaatattgt atgatatacg taaaaagtta tacaaccatt
     8581 tacaagcttt aagtgcgaga ttttatgcta ataatcaagt aggtcaagta atatctagag
     8641 tgattaatga tgttgaacaa acaaaagatt tcattttaac cgggttaatg aatatttggt
     8701 tagattgtat aacaattatt attgcactat ccataatgtt ctttttagat gtgaaattga
     8761 ctttagcagc actgtttatc ttcccatttt acattttaac ggtgtacgtt ttctttggaa
     8821 gattaagaaa attgacacgt gaaagatctc aagcattagc tgaggttcaa ggattcttgc
     8881 atgaacgtgt tcaaggtatt tcagtcgtta aaagttttgc gattgaagac aatgaagcga
     8941 aaaactttga taaaaagaat actaatttcc taacacgtgc gttgaaacat acaagatgga
     9001 atgcctattc ctttgccgca attaatacag ttacagatat tggaccaatt attgtcatcg
     9061 gtgttggtgc atatcttgct atttctggat caatcacagt aggtacactt gcagcatttg
     9121 ttggatactt agagttattg ttcgggcctt tacgtcgttt agtcgcatca tttacaactt
     9181 taacgcaaag ttttgcttca atggaccgtg tattccaatt aattgatgaa gattatgaca
     9241 tcaaaaatgg tgttggtgct caacctattg aaattaaaca aggtcgtatt gatattgatc
     9301 atgttagttt tcaatataac gataacgaag ctccaatttt aaaagatatt aatttgagta
     9361 ttgaaaaagg agaaacagtt gctttcgtag gtatgagtgg tggtggtaaa tcaacattaa
     9421 ttaacttaat accgagattt tacgatgtaa cttctgggca aattttaata gatggtcaca
     9481 acattaaaga ttttttaacg ggaagtttaa gaaatcaaat aggattggtg caacaggata
     9541 atattttatt ctctgataca gttaaggaaa atattttact tggtcgtcca acagcaacag
     9601 atgaagaagt agttgaagcg gcgaaaatgg ctaatgcaca tgactttatt atgaacttgc
     9661 cacagggata tgacactgaa gtaggtgaac gaggtgttaa attatcaggt ggtcaaaaac
     9721 aaagattatc gattgctaga atatttttaa ataatccgcc aattcttatc ttggatgaag
     9781 caacaagtgc acttgattta gaaagtgaat ccattattca agaagcatta gatgtgttga
     9841 gtaaagatcg aacgacactt atcgtagcgc atcgcttgtc cactattaca catgctgaca
     9901 aaattgtcgt aattgaaaat ggacatattg ttgaaacagg tacgcatcgt gaattgattg
     9961 caaaacaagg tgcttacgag catttatata gcattcaaaa cttataaagt attagttgtt
    10021 tgacttcagt acaatcttga agagaaaatt tgtaacagga tggtggggtc ataacataga
    10081 aaaagcagta aga
//
LOCUS       DALPQQ010000094         9955 bp    DNA     linear   BCT 22-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus strain K18-6-464
            SAMD00233528-rid16434743.denovo.094, whole genome shotgun sequence.
ACCESSION   DALPQQ010000094 DALPQQ010000000
VERSION     DALPQQ010000094.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMD00233528
            Sequence Read Archive: DRR236061
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 9955)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9955)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001543423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001543423.1
            Genome Coverage       :: 77x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/22/2022 17:09:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,811
            CDSs (total)                      :: 2,743
            Genes (coding)                    :: 2,689
            CDSs (with protein)               :: 2,689
            Genes (RNA)                       :: 68
            rRNAs                             :: 2, 4, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 4, 2 (16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 54
            CDSs (without protein)            :: 54
            Pseudo Genes (ambiguous residues) :: 0 of 54
            Pseudo Genes (frameshifted)       :: 27 of 54
            Pseudo Genes (incomplete)         :: 27 of 54
            Pseudo Genes (internal stop)      :: 10 of 54
            Pseudo Genes (multiple problems)  :: 10 of 54
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9955
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMD00233528-rid16434743.denovo.094"
                     /strain="K18-6-464"
                     /db_xref="taxon:1280"
                     /geo_loc_name="Japan: Niigata"
     gene            97..1410
                     /gene="murT"
                     /locus_tag="O7798_001935"
     CDS             97..1410
                     /gene="murT"
                     /locus_tag="O7798_001935"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500599.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipid II isoglutaminyl synthase subunit MurT"
                     /protein_id="HDC2864191.1"
                     /translation="MRQWTAIHLAKLARKASRAVGKRGTDLPGQIARKVDTDILRKLA
                     EQVDDIVFISGTNGKTTTSNLIGHTLKANNIQIIHNNEGANMAAGITSAFIMQSTPKT
                     KIAVIEIDEGSIPRVLKEVTPSMMVFTNFFRDQMDRFGEIDIMVNNIAETISNKGIKL
                     LLNADDPFVSRLKIASDTIVYYGMKAHAHEFEQSTMNESRYCPNCGRLLQYDYIHYNQ
                     IGHYHCQCGFKREQAKYEISSFDVAPFLYLNINDEKYDMKIAGDFNAYNALAAYTVLR
                     ELGLNEQTIKNGFETYTSDNGRMQYFKKERKEAMINLAKNPAGMNASLSVGEQLEGEK
                     VYVISLNDNAADGRDTSWIYDADFEKLSKQQIEAIIVTGTRAEELQLRLKLAEVEVPI
                     IVERDIYKATAKTMDYKGFTVAIPNYTSLAPMLEQLNRSFEGGQS"
     gene            1412..2143
                     /locus_tag="O7798_001936"
     CDS             1412..2143
                     /locus_tag="O7798_001936"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500598.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type 1 glutamine amidotransferase"
                     /protein_id="HDC2864192.1"
                     /translation="MHELTIYHFMSDKLNLYSDIGNIIALRQRAKKRNIKVNVVEINE
                     TEGITFDECDIFFIGGGSDREQALATKELSKIKTPLKEAIEDGMPGLTICGGYQFLGK
                     KYITPDGTELEGLGILDFYTESKTNRLTGDIVIESDTFGTIVGFENHGGRTYHDFGTL
                     GHVTFGYGNNDEDKKEGIHYKNLLGTYLHGPILPKNYEITDYLLEKACERKGIPFEPK
                     EIDNEAEIQAKQVLIDRANRQKKSR"
     gene            2229..2339
                     /locus_tag="O7798_001937"
     CDS             2229..2339
                     /locus_tag="O7798_001937"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500597.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDC2864193.1"
                     /translation="MDGNNQIDVCFFVLVNNYYTMSIYPRIINSNGDYAT"
     gene            2368..2781
                     /locus_tag="O7798_001938"
     CDS             2368..2781
                     /locus_tag="O7798_001938"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500596.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDC2864194.1"
                     /translation="MKPTKVILKDASYLHSKTSITFILKDVVIEEDNKIYYFDTSATF
                     EDQEVKFEFALFDSDMDNLKHMDCDNPVTEIYFIEPDLHFTIIDFNQELLCIYIDFDS
                     GLRHSNMATESGISLRINVAKSDFTKFINELASLH"
     gene            complement(3271..4257)
                     /locus_tag="O7798_001939"
     CDS             complement(3271..4257)
                     /locus_tag="O7798_001939"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500595.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aromatic acid exporter family protein"
                     /protein_id="HDC2864195.1"
                     /translation="MNDQWYKHLIGARTIKTGIAIFLTAVFCMALDLTPIYAILTAVV
                     TIEPTAKASLIKGYRRLPATVIGAGFAVLFTYLFGDQSPFTYALSATFTILFCTKLKL
                     QVGTNVAVLTSLAMIPGIHDAYIFNFLSRTLTAIIGLVTSGLINFMVFPPKYYGQVEE
                     KLSKTDALMYKLFYNRCQELILSRLQSDKSEKAYKNIFNLNNQVETLISYQRDELSYH
                     KKKECDWKLLNQLTKRAYTNRLFITHLSNIIYLPKNTRVNFSGDEKMALLKISSSIKD
                     IFYDGSFKREDDSVETLRSTIKALEISGENQIKSHILYEVLMIYRLLDSRYA"
     gene            4844..5602
                     /gene="map"
                     /locus_tag="O7798_001940"
     CDS             4844..5602
                     /gene="map"
                     /locus_tag="O7798_001940"
                     /EC_number="3.4.11.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500593.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I methionyl aminopeptidase"
                     /protein_id="HDC2864196.1"
                     /translation="MIVKTEEELQALKEIGYICAKVRNTMQAATKPGITTKELDNIAK
                     ELFEEYGAISAPIHDENFPGQTCISVNEEVAHGIPSKRVIREGDLVNIDVSALKNGYY
                     ADTGISFVVGESDDPMKQKVCDVATMAFENAIAKVKPGTKLSNIGKAVHNTARQNDLK
                     VIKNLTGHGVGLSLHEAPAHVLNYFDPKDKTLLTEGMVLAIEPFISSNASFVTEGKNE
                     WAFETSDKSFVAQIEHTVIVTKDGPILTTKIEEE"
     gene            5819..6205
                     /locus_tag="O7798_001941"
     CDS             5819..6205
                     /locus_tag="O7798_001941"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500592.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDC2864197.1"
                     /translation="MNYVERYIEQFLRATVRNNIKHYLLMLDEKMKNLDDYMRYLITK
                     KEQLSKLIDSLMLTLENKYIDIAEAFQIQCAREINNQEIENIKSELNKVEAYYAQIET
                     QIQQTSTEKIATEKTSYLINYMNAVA"
     gene            6220..6921
                     /locus_tag="O7798_001942"
     CDS             6220..6921
                     /locus_tag="O7798_001942"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500591.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell wall-active antibiotics response protein"
                     /protein_id="HDC2864198.1"
                     /translation="MTHKYISTQMLIIFTALMIIANFYYIFFEKIGFLLVLLLGCVLV
                     YVGYLYFHKIRGLLAFWIGALLIAFTLLSNKYTIIILFVFLLLLIVRYLIHKFKPKKV
                     VATDEVMTSPSFIKQKWFGEQRTPVYVYKWEDVQIQHGIGDLHIDLTKAANIKENNTI
                     VVRHILGKVQVILPVNYNINLHVAAFYGSTYVNEKSYKVENNNIHIEEMMKPDNYTVN
                     IYVSTFIGDVEVIYR"
     gene            6918..7961
                     /locus_tag="O7798_001943"
     CDS             6918..7961
                     /locus_tag="O7798_001943"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500590.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sensor histidine kinase"
                     /protein_id="HDC2864199.1"
                     /translation="MNHYIRTIGSMLILVYSMLAAFLFIDKVFVNIIYFQGMFYTQIF
                     GIPVFLFLNLIIILLCIIVGSVLAYKINQQNDWIKTQIERSMEGETVGINDQNIEIYS
                     ETLDLYHTLVPLNQELHKLRLKTQNLTNENYNINDVKVKKIIEDERQRLARELHDSVS
                     QQLFAASMMLSAIKETKLEPPLDQQIPILEKMVQDSQLEMRALLLHLRPLGLKDKSLG
                     EGIKDLVIDLQKKVPMKVVHEIQDFKVPKGIEDHLFRITQEAISNTLRHSNGTKVTVE
                     LFNKDDYLLLRIQDNGKGFNVDEKLEQSYGLKNMRERALEIGATFHIVSLPDSGTRIE
                     VKAPLNKEDSYDD"
     gene            7951..8580
                     /gene="vraR"
                     /locus_tag="O7798_001944"
     CDS             7951..8580
                     /gene="vraR"
                     /locus_tag="O7798_001944"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500589.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-component system response regulator VraR"
                     /protein_id="HDC2864200.1"
                     /translation="MTIKVLFVDDHEMVRIGISSYLSTQSDIEVVGEGASGKEAIAKA
                     HELKPDLILMDLLMDDMDGVEATTQIKKDLPQIKVLMLTSFIEDKEVYRALDAGVDSY
                     ILKTTSAKDIADAVRKTSRGESVFEPEVLVKMRNRMKKRAELYEMLTEREMEILLLIA
                     KGYSNQEIASASHITIKTVKTHVSNILSKLEVQDRTQAVIYAFQHNLIQ"
     gene            complement(8696..9913)
                     /locus_tag="O7798_001945"
     CDS             complement(8696..9913)
                     /locus_tag="O7798_001945"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500588.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YihY/virulence factor BrkB family protein"
                     /protein_id="HDC2864201.1"
                     /translation="MSKKDHSSSKYLNSVKEAQEESKKKNKSNPKIDVDRTYIEPQQF
                     QSKKPKKDDQVFFLSRLNKPAKYKKDSNFLSYLIYRIGKDDASGLAAQMTYHFVLAMF
                     PMLLFLLTLLPFFNIKQSQITNMLSNAPAETSTLIKSVIGDITQNSSGGLLSIGLILA
                     IWSASNGMTAIMNSFNVAYDVEDSRNGIVLKLLSVVFTVVMGVVFVVALALPTFGSVI
                     SHFLFGPLGFDEQVKWIFNLIRIVLPIIIIFIIFIVLYSVAPNVKTKLKSVLPGAVFT
                     SIIWLAGSFGFGWYISNFGNYSKTYGSIAGIIILLLWLYITSFIIIVGAEINAIIHQR
                     SVIKGKTPEEAALEHDDNNKNHYNENTRYEYDEDSNATHQRTYHVDEHPSDTYPEDDK
                     NIKDKIVDKLKKD"
BASE COUNT         3585 a         1425 c         1805 g         3140 t
ORIGIN      
        1 atttagaaac actgtatcaa tttgtgattg agaaactttt ttgaagttgc cttgtcatgt
       61 tataatgatg cgagtggaaa tttgaggagg aaacacatga gacagtggac ggcaatccat
      121 ctagcgaaat tggcgcgtaa agcaagtaga gcagtaggta aaagaggaac agatttacct
      181 ggacaaatcg ctagaaaagt ggatacagat atattaagaa aattagcaga gcaagttgat
      241 gatattgtat ttatcagtgg aacaaatggt aaaacaacga cttcaaactt aattggacat
      301 actttaaaag caaataatat tcaaattata cacaataatg aaggtgctaa tatggctgca
      361 ggtataactt ctgcattcat catgcaatca acacctaaga ctaaaattgc ggtaatcgaa
      421 attgatgaag gttcgattcc acgtgtgtta aaagaagtta caccttcaat gatggtattt
      481 actaatttct ttagagatca aatggatcgc ttcggtgaaa ttgatattat ggttaataac
      541 attgcagaga caattagtaa taaaggcatc aaattattgc taaatgctga tgatccattt
      601 gtgagtcgtt tgaaaatcgc aagtgatacg attgtgtact atggtatgaa agcacatgcc
      661 catgaatttg aacaaagtac gatgaatgaa agtagatatt gtccaaactg tggtcgctta
      721 ttgcaatacg attatattca ttataatcaa attggtcatt atcactgtca gtgtggtttc
      781 aaacgagagc aagcaaaata tgaaatatca agttttgatg tggcaccgtt tttatattta
      841 aatatcaatg atgaaaaata tgatatgaaa attgcaggtg actttaacgc ttataacgcg
      901 ttagcagcat atactgtttt aagagagcta gggttaaatg aacaaacaat taaaaatggc
      961 tttgaaacgt atacatcaga caatggtcgt atgcagtact ttaaaaaaga acgaaaagaa
     1021 gcgatgatca atttagctaa aaatcctgca ggaatgaatg caagtttatc agttggtgaa
     1081 caattagaag gcgaaaaagt gtatgttatt tcgctaaatg ataacgctgc agatggtcga
     1141 gatacttcat ggatttatga tgcagatttt gaaaaattat ctaagcaaca aattgaagct
     1201 atcatcgtga caggtacacg agcagaagaa cttcaattgc gattgaagtt agcagaggtt
     1261 gaagtaccaa ttatagttga gcgtgatatt tataaagcaa cggcaaagac tatggattat
     1321 aaaggtttca cagttgcaat accaaactat acatcattag cgcctatgct tgaacaatta
     1381 aaccgttcgt ttgaaggagg tcaatcataa tatgcatgaa ttgactattt atcattttat
     1441 gtcagataaa ttgaatttat acagtgatat aggaaatatt attgctttaa gacaacgtgc
     1501 taaaaaacga aatattaaag ttaatgtcgt agaaatcaat gaaacagaag gtattacctt
     1561 tgatgaatgt gatattttct ttatcggtgg tggaagtgat agagaacaag cattagcaac
     1621 aaaagaatta agtaaaatta agacaccact taaagaagcg attgaagatg gtatgccggg
     1681 attaacgatt tgtggaggct atcaattttt agggaaaaaa tatatcacgc ctgatggtac
     1741 agaattagaa gggttaggta ttttagattt ttatactgaa tcaaagacaa accgattaac
     1801 aggagatatt gttatcgaaa gtgatacttt tggaactatt gtaggttttg aaaatcacgg
     1861 tggtagaaca tatcatgatt tcggtacact tggtcatgtt acttttggtt atggtaataa
     1921 tgatgaagat aaaaaagaag gcattcatta taaaaattta ttaggtactt atttacatgg
     1981 accaatttta cctaaaaatt acgaaatcac tgattatctg ttagaaaaag cttgtgaacg
     2041 taagggtatt ccgtttgagc ctaaagaaat agataatgaa gcggaaatac aagcgaaaca
     2101 agtattaata gacagagcaa atagacagaa gaaatctcgt taactctgaa catcgcatca
     2161 atggatttaa tattgataaa cgatgaagtt tagtaattaa tcatatatgt ataaacacac
     2221 acattatttt ggatggaaac aaccaaattg atgtgtgttt ttttgttcta gtgaataatt
     2281 attatacaat gagtatctat cctagaatta tcaatagtaa tggtgattat gcaacatgaa
     2341 aaaatgaatg atgaaaggaa tttgacgatg aagcctacta aagtgatatt aaaagatgca
     2401 tcttatttac atagcaaaac atcgataaca tttattttaa aagatgtagt tatcgaagaa
     2461 gataataaaa tttattattt cgacactagt gcaactttcg aagatcaaga agttaaattt
     2521 gaatttgcac tctttgatag tgacatggac aatttgaaac atatggattg cgacaatcct
     2581 gttactgaaa tatattttat agaacctgat ttacatttta caattattga ttttaatcaa
     2641 gaactgcttt gtatttatat tgattttgat tctggtttaa ggcattcaaa catggcaaca
     2701 gaatctggta tttcattaag gataaatgtt gctaaatcag attttactaa atttattaat
     2761 gaattagcct ctttacatta atgatttaaa tctgatatgt aattacaatc aaaaaagaca
     2821 gccacatccc tccgtagttt aggcgtgtgg ctatatttga gtctgaatat ttatgcttgt
     2881 aattttaaaa agggacatgc tatatacgat aaaaagaggc ggggacataa atcaatgttc
     2941 tatgctctac gaagttatat tggcagtagt tgactgaacg aaaatgcgct tgtaacaagc
     3001 ttttttcaat tctagtcagg ggccccaaca aagagaaatt ggattcccaa tttctacaga
     3061 caatgcaagt tggggtgtgg gccccaacaa agagaaattg gattcccaat ttctacagac
     3121 aatgcaagtt ggggtgtggg ccccaacaca gagaatttcg aaaagaaatt ctacaggcaa
     3181 agcgagttgg ggtgggacga cgaaataaat tttatgaaaa tatcatttct gtcccactcc
     3241 catggtgcca attagcataa ggtacttaaa ttaagcatat ctgctgtcta gcagtcgata
     3301 aatcattaga acttcgtata gtatatgact tttaatttga ttttcaccac taatttcaag
     3361 tgcttttata gtcgaacgta aagtttctac agaatcatct tctctcttaa aagaaccatc
     3421 ataaaatata tctttgatgc tactactaat ttttagcaat gccatttttt cgtcacctga
     3481 aaagttaaca cgagtatttt taggcaagta aatgatattt gataaatgag tgataaacaa
     3541 acgattcgta tatgcacgtt tagttaattg attgagtaat ttccaatcac attctttttt
     3601 cttatgatag cttaattcat cacgttgata acttattaac gtttcaactt gattatttaa
     3661 attgaaaata tttttatatg ctttttcgct tttatcagat tgcagtcttg ataagataag
     3721 ttcttggcag cgattgtaaa ataatttata catcaaggca tctgtcttac ttaatttttc
     3781 ttcgacctga ccataatact taggtggaaa caccatgaag ttaattaaac ctgatgtcac
     3841 gagtccaata attgctgtca atgttcgaga caaaaaattg aatatgtagg catcatgaat
     3901 acctggaatc atagctaatg atgttagtac agcgacattc gtaccaactt gcaatttgag
     3961 ttttgtacag aataaaatcg tgaacgttgc actcaatgca tatgtaaaag gtgattgatc
     4021 gccgaataaa tatgtaaata atactgcaaa gcctgcacca attaccgtag caggtaatct
     4081 acgataacct ttaataagtg atgccttggc agttggttca attgtgacta cagctgttaa
     4141 aatggcatag atgggtgtta aatctagtgc catacaaaag acagctgtta aaaaaatggc
     4201 aataccagtt ttaattgttc tggcaccaat taaatgttta taccattgat cgttcatttt
     4261 ttaacctcta atcatcgtaa aatcttagcg agcgctttat aataatagta tcgtacattg
     4321 gaaaagttca tgtatgtaaa atatttgaaa taatcataca taagcattac tttgattttc
     4381 atatacatta atcaaagttc tgggctccac aatgttatat tgttagtagt tgactgaaat
     4441 aaaatgcact tgtaacaagc atttttcaat tatagtccgg ggccccaaca tagagaattt
     4501 caaaaaagaa attctacagg caatgcaggt tggcggggcc ccaacacaga agctgacgaa
     4561 aagtcagctt acaataatgt gcaagttggg gtgtgggccc caacacagaa gctgacgaaa
     4621 agtcagctta cgataatgtg caggttggcg gggccccaac atagagaaat tggatctaca
     4681 atttctacag gcaatgcaag ttggggtaca acgataaaga aatatttttt ctttatcaca
     4741 ctatgtctca ctcactttcc aaaatactaa agtaacatct ttagtatatc aaagaatttt
     4801 tgctataata agttataatt atataaaaaa ggaacgggat aaaatgattg taaaaacaga
     4861 agaagaatta caagcgttaa aagaaattgg atacatatgc gctaaagtgc gcaatacaat
     4921 gcaagctgca accaaaccag gtatcactac gaaagagctt gataatattg cgaaagagtt
     4981 atttgaagaa tacggtgcta tttctgcgcc aattcatgat gaaaattttc ctggtcaaac
     5041 gtgtattagt gtcaatgaag aggtggcaca tgggattcca agtaagcgtg tcattcgtga
     5101 aggagattta gtaaatattg atgtatcggc tttgaagaat ggctattatg cagatacagg
     5161 catttcattt gtcgttggag aatcagatga tccaatgaaa caaaaagtat gtgacgtagc
     5221 aacgatggca tttgagaatg caattgcaaa agtaaaaccg ggtactaagt taagtaacat
     5281 tggtaaagcg gtgcataata cagctagaca aaatgatttg aaagtcatta aaaacttaac
     5341 aggtcatggt gttggtttat cattacatga agcaccagca catgtactta attactttga
     5401 tccaaaagac aaaacattat taactgaagg tatggtatta gctattgaac cgtttatctc
     5461 atcaaatgca tcatttgtta cagaaggtaa aaatgaatgg gcttttgaaa cgagcgataa
     5521 aagttttgtt gctcaaattg agcatacggt tatcgtgact aaggatggtc cgattttaac
     5581 gacaaagatt gaagaagaat agttcaacat atactaagac taaagtatga acatcattta
     5641 gttccggagc ctattcatat tggtttcgga actgttttat aataattaag aacacaatca
     5701 atgcgtcatt tcaaaaatat gttgtaacaa agtagttttt aagcaaacat atcatcgaca
     5761 tcaacgaaga tacatagcgc atttggtatt ttaaaactta ttataaaagg tgatagttat
     5821 gaactatgtt gaacgttata ttgaacagtt tttgagagca acagtaagaa ataatatcaa
     5881 gcactacctt ttaatgctag atgaaaaaat gaaaaattta gatgattata tgcgttattt
     5941 aattactaaa aaagaacaac ttagcaagtt aattgacagt ctaatgctaa cattagaaaa
     6001 taaatatatt gatattgctg aagcatttca aattcaatgt gcaagagaaa tcaataatca
     6061 agaaattgaa aatattaaat cagagttgaa taaagttgaa gcatattatg cacaaattga
     6121 aactcaaatt caacaaactt caactgaaaa aatagcaaca gaaaaaacat cgtatctaat
     6181 aaattatatg aacgctgtgg catagaaagg cggcgaaaca tgacacacaa atatatatca
     6241 acgcaaatgt tgatcatttt tactgcatta atgattattg ccaattttta ctacatattt
     6301 tttgaaaaaa ttggcttttt actcgttcta ttattgggat gtgtattagt ttatgtagga
     6361 tatctttatt ttcataaaat acgtggcctt ttggcgtttt ggataggcgc gctattaatt
     6421 gcattcacat tattgtctaa taagtataca atcatcatct tgttcgtctt tttattatta
     6481 cttattgtgc gttatttaat acacaagttt aaaccaaaaa aagtagttgc gacggatgag
     6541 gttatgactt caccatcttt tattaaacaa aagtggtttg gtgagcaacg tacaccagtt
     6601 tatgtatata agtgggaaga tgtacaaatt caacatggaa ttggcgacct acatattgac
     6661 ttaacaaaag ctgcaaatat taaggaaaat aataccattg ttgttagaca cattttaggt
     6721 aaagtgcagg ttatattgcc ggttaattac aatattaatt tacatgtagc tgctttttat
     6781 ggaagtactt acgtgaatga aaaatcatat aaagttgaaa ataacaatat tcatattgaa
     6841 gaaatgatga aaccggataa ctatacagtt aatatctacg tatcaacgtt tatcggagac
     6901 gtagaggtga tttatcgatg aaccactaca ttagaacaat tggttcaatg ctcatcttag
     6961 tatatagcat gctagctgca tttctgttca tcgataaagt ttttgtaaat atcatctatt
     7021 ttcaaggtat gttttataca caaatattcg gaataccagt ttttttattt ttaaatctca
     7081 tcatcatatt attgtgtatt attgttggtt cggtactcgc ttacaaaatc aatcagcaaa
     7141 atgattggat taagacgcaa attgagcgtt caatggaagg cgaaacagtt ggcattaatg
     7201 atcaaaatat agaaatatat agtgaaacgt tagatttata ccatacactc gtacctttaa
     7261 atcaagaatt gcataagttg cgacttaaaa ctcaaaactt aaccaatgaa aattataata
     7321 ttaatgatgt gaaagttaaa aagattattg aagatgaacg tcaaagacta gcacgagaac
     7381 ttcacgattc tgttagtcag caactttttg cggcaagtat gatgctatct gctatcaaag
     7441 aaacgaagtt agaaccacca ttagaccaac aaattcctat tttagagaaa atggttcaag
     7501 attcgcagtt agaaatgcgt gctttgctgt tacatttaag accgcttggt ttaaaagaca
     7561 aatctttagg tgagggtatt aaagatttag ttattgattt acaaaaaaaa gtgccaatga
     7621 aagttgtgca tgaaatacaa gattttaaag tgcctaaagg tattgaagat catttgttca
     7681 gaattacaca ggaagcaatt tcgaatacat tgcgtcattc aaacggtaca aaagtgacag
     7741 tagaattgtt taataaagac gattatttat tgttgagaat tcaagataat ggtaaaggtt
     7801 ttaatgttga tgaaaaatta gaacaaagtt atggacttaa aaatatgcgt gaaagagctt
     7861 tggaaattgg tgcaacgttc catattgtat cattgccaga ttcaggtaca cgtatcgagg
     7921 tgaaagcacc tttaaataag gaggattcgt atgacgatta aagtattgtt tgtggatgat
     7981 catgaaatgg tacgtatagg aatttcaagt tatctatcaa cgcaaagtga tattgaagta
     8041 gttggtgaag gcgcttctgg taaagaagca attgccaaag cccatgagtt gaagccagat
     8101 ttaattttaa tggatttact tatggatgac atggatggtg tagaagcgac gactcagatt
     8161 aaaaaagatt taccgcaaat taaagtatta atgttaacta gttttattga agataaagag
     8221 gtatatcgtg cattagatgc aggtgtcgat agttacattt taaaaacaac aagtgcaaaa
     8281 gatatcgccg atgcagttcg taaaacttct agaggagaat ctgtttttga accggaagtt
     8341 ttagtgaaaa tgcgtaaccg tatgaaaaag cgcgcagagt tatatgaaat gcttacagaa
     8401 cgagaaatgg aaatattatt attgattgcg aaaggttact caaatcaaga aattgctagt
     8461 gcatcgcata ttactattaa aacggttaag acacatgtga gtaacatttt aagtaagtta
     8521 gaagtgcaag atagaacaca agctgttatc tatgcattcc aacataattt aattcaatag
     8581 ttcatatcga attaagaaaa gttacttacg ccaatcacaa tataacatca aatagacacc
     8641 aaaaaacaga ggttttcgca ataatcatta gcgaaaacct ctgttttgtt ggtgtttagt
     8701 cttttttaag cttatcaacg attttgtctt ttatattttt atcatcttct ggataggtat
     8761 cactaggatg ttcatcaaca tgatacgtac gttgatgtgt tgcattacta tcttcatcat
     8821 attcgtatct agtgttctca ttataatgat ttttattatt gtcatcatgt tctaatgctg
     8881 cttcttcagg tgttttacct ttaattacac tacgctgatg aatgattgca ttgatttcag
     8941 caccgacaat tataataaaa cttgtgatat ataaccatag taacaaaatg atgatacccg
     9001 cgatactgcc atatgtttta gaatagttac caaaatttga aatataccaa ccaaaaccaa
     9061 atgaaccagc taaccaaata attgaagtaa atactgcacc tggtaatact gacttaagct
     9121 tcgttttaac gttaggtgca accgaatata acacgataaa tatgataaat ataataatga
     9181 ttggtaacac aattctaata aggttaaaaa tccatttcac ttgttcgtca aatccaagtg
     9241 gaccgaatag gaaatgacta attacagaac caaacgttgg taatgctaga gcaactacaa
     9301 acacaacgcc cataactaca gtgaagacaa cacttagtag ttttaatacg attccattac
     9361 ggctatcttc tacatcgtaa gcaacattga aagaattcat aattgcagtc attccatttg
     9421 aagctgacca aattgctaaa atcaaaccga tagataataa gccaccactg gagttttgag
     9481 ttatatcacc aattacactc ttaattagag tagatgtttc agcgggtgca ttgcttaaca
     9541 tattagtaat ttgactctgc ttaatattga aaaatggtaa taatgttaat aggaaaagca
     9601 acatagggaa catagcaagt acgaaatggt aagtcatttg tgctgctagt cctgaggcat
     9661 catcttttcc tatgcgatag atgagatatg ataagaaatt agagtctttc ttatattttg
     9721 caggtttatt taatcttgat aagaagaaaa cctgatcatc ttttttaggt ttcttagatt
     9781 ggaattgttg aggttcaata tatgtacgat caacatcaat tttgggatta cttttatttt
     9841 tcttttttga ctcctcttgc gcttccttaa cagaattaag gtattttgaa gaagagtgat
     9901 cctttttcga catgtgcact ccttaacctt tctctatgta atgttttata aagta
//
LOCUS       DALPQQ010000095         9943 bp    DNA     linear   BCT 22-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus strain K18-6-464
            SAMD00233528-rid16434743.denovo.095, whole genome shotgun sequence.
ACCESSION   DALPQQ010000095 DALPQQ010000000
VERSION     DALPQQ010000095.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMD00233528
            Sequence Read Archive: DRR236061
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 9943)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9943)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001543423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001543423.1
            Genome Coverage       :: 77x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/22/2022 17:09:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,811
            CDSs (total)                      :: 2,743
            Genes (coding)                    :: 2,689
            CDSs (with protein)               :: 2,689
            Genes (RNA)                       :: 68
            rRNAs                             :: 2, 4, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 4, 2 (16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 54
            CDSs (without protein)            :: 54
            Pseudo Genes (ambiguous residues) :: 0 of 54
            Pseudo Genes (frameshifted)       :: 27 of 54
            Pseudo Genes (incomplete)         :: 27 of 54
            Pseudo Genes (internal stop)      :: 10 of 54
            Pseudo Genes (multiple problems)  :: 10 of 54
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9943
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMD00233528-rid16434743.denovo.095"
                     /strain="K18-6-464"
                     /db_xref="taxon:1280"
                     /geo_loc_name="Japan: Niigata"
     gene            complement(134..319)
                     /locus_tag="O7798_001946"
     CDS             complement(134..319)
                     /locus_tag="O7798_001946"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500888.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDC2864202.1"
                     /translation="MLSNKRVEKEAGCEHKKFLKKLLTLNSKVDNMIKSSKTTQLFLK
                     KNFKSVKLTIEITIKTI"
     gene            complement(408..1472)
                     /locus_tag="O7798_001947"
     CDS             complement(408..1472)
                     /locus_tag="O7798_001947"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017804887.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="P-loop NTPase"
                     /protein_id="HDC2864203.1"
                     /translation="MLTVDQVKELVGEIKDPIIDVPLKETEGIVEVSIKEEKEHVSVK
                     LAMAQLGGAPQLDLQMAVVNALKENGAKTVGIRFETLPEEKVNQFKPKEENKPKTIEG
                     LLSQNNPVEFIAIASGKGGVGKSTVAVNLAVALAREGKKVGLVDADIYGFSVPDMMGI
                     DEKPGIKGKEVIPVERHGVKVISMAFFVEENAPVIWRGPMLGKMLTNFFTEVKWGDIE
                     YLILDLPPGTGDVALDVHTMLPSSKEIIVTTPHPTAAFVAARAGAMAKHTDHSILGVI
                     ENMSYFESKETGNKEYVFGKGGGTKLADELNTQLLGELPLEQPSWNPKDFAPSIYQSD
                     DRLGKIYSSIAQKVIAATNK"
     gene            complement(1620..3062)
                     /gene="lmrS"
                     /locus_tag="O7798_001948"
     CDS             complement(1620..3062)
                     /gene="lmrS"
                     /locus_tag="O7798_001948"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500890.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux MFS transporter LmrS"
                     /protein_id="HDC2864204.1"
                     /translation="MAKVELTTRRRNFIVAVMLISEFVAILNQTLLNTALPSIMRELN
                     INESTSQWLVTGFMLVNGVMIPLTAYLMDRIKTRPLYLAAMGTFLLGSIVAALAPNFG
                     VLMLARVIQAMGAGVLMPLMQFTLFTLFSKEHRGFAMGLAGLVIQFAPAIGPTVTGLI
                     IDQASWRVPFIIIVGIAILAFVFGLVSISSYNEVKYTKLDKRSVMYSTIGFGLMLYAF
                     SSAGDLGFTSPIVIGALILSMVIIYLFIRRQFNITNALLNLRVFKNRTFALCTISSMI
                     IMMSMVGPALLIPLYVQNSLSLSALLSGLVIMPGAIINGIMSVFTGKFYDKYGPRPLI
                     YTGFTILTITTIMLCFLHTDTSYTYLIVVYAIRMFSVSLLMMPINTTGINSLRNEEIS
                     HGTAIMNFGRVMAGSLGTALMVTLMSFGAKIFLSTSPSHLTATEIKQQSIAIGVDISF
                     AFVAVLVMAAYVIALFIREPKEIESNRRKF"
     gene            complement(3384..3857)
                     /gene="sepA"
                     /locus_tag="O7798_001949"
     CDS             complement(3384..3857)
                     /gene="sepA"
                     /locus_tag="O7798_001949"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500891.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux transporter SepA"
                     /protein_id="HDC2864205.1"
                     /translation="MIVNYLKHKFYNLLTTMIVLFIFVLSGAIFLTFLGFGLYGLSRI
                     LIYFRLGDFTYNRSMYDNLLYYGSYIIFGYFIIFAVEHLMDYFRKMLPENAYFRGATF
                     HLISYTVATTLFYFIIHLNYVYINIDFWVIMVIIGFLYVCKLQFYPESKNLNNRK"
     gene            complement(3956..5299)
                     /locus_tag="O7798_001950"
     CDS             complement(3956..5299)
                     /locus_tag="O7798_001950"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500892.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HDC2864206.1"
                     /translation="MRLKSIITVIALILIMFMSAIESSIISLALPTIKQDLNAGNLIS
                     LIFTAYFIALVIANPIVGELLSRFKIIYVAIAGLLLFSIGSFMCGLSTNFTMLIISRV
                     IQGFGSGVLMSLSQIVPKLAFEIPLRYKIMGIVGSVWGISSIIGPLLGGGILEFATWH
                     WLFYINIPIAIIAIILVIWTFHFPEEETVAKSKFDTKGLTLFYVFIGLIMFALLNQQL
                     LLLNFLSFILAIVVAMCLFKVEKHVSSPFLPVVEFNRSITLVFITDLLTAICLMGFNL
                     YIPVYLQEQLGLSPLQSGLVIFPLSVAWITLNFNLHRIEAKLSRKVIYLLSFTLLLVS
                     SIIISFGIKLPVLIAFVLILAGLSFGYIYTKDSVIVQEETSPLQMKKMMSFYGLTKNL
                     GASIGSTIMGYLYAIQSGIFGPNLHNVLSAVAVISIGLIVLWVVFFKEQSSQSKE"
     gene            complement(5476..6159)
                     /locus_tag="O7798_001951"
     CDS             complement(5476..6159)
                     /locus_tag="O7798_001951"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500893.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hemolysin III family protein"
                     /protein_id="HDC2864207.1"
                     /translation="MSKSTKKSNDTIVETFKDIIPLSFGEEIGNAASHGVAALLTLLV
                     LPYAAVHSYIAHGMLASVSMSIYVISIFMMFISSTIYHSMQNETPHKYILRIIDHSMI
                     YVAISGTYTPILLTVVGGWIGWTVFILLWGTTLWGILYKSIAVKVNQKLSLIVYLVMG
                     WVGIILLPIIFIRTSWIFILFIFLGGVSYTIGAWFYAQKNRPYFHMIWHIFIVIASLL
                     HLIAILYFM"
     gene            complement(6178..7365)
                     /locus_tag="O7798_001952"
     CDS             complement(6178..7365)
                     /locus_tag="O7798_001952"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500894.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDPGP type 1 family protein"
                     /protein_id="HDC2864208.1"
                     /translation="MLDKNQLAKYKQDHLCEYEKIMSNNEKEALEEKVASLDLDFIAK
                     LYNDLYINKKTIDDVSAVSEVKYDIKSQMSDDEIKRLEEQGLQAIKEGQFAVLLMAGG
                     QGTRLGYKGPKGSFEIEGVSLFELQANQLKTLNHQSGHTIQWYIMTSDINHEETLAYF
                     EAHSYFGYDQEAIHFFKQDNIVALSEEGKLILNQQGRIMETPNGNGGVFKSLDKAGYL
                     EEMSNNGVKYIFLNNIDNVLVRVLDPLFAGFTVEHDYDITSKTIQPKPGESVGRLVNV
                     DCKDTVLEYSELDPEVANQFNNANIGIHAFKLGFILNAVNRELPYHLAIKNLKQLDEN
                     FGVIEQPTLKFELFYFDIFTYGTSFVTLQVPREEEFSPLKNKEGKDSVATATEDLRRM
                     GLI"
     gene            complement(7409..7924)
                     /locus_tag="O7798_001953"
     CDS             complement(7409..7924)
                     /locus_tag="O7798_001953"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500895.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metal-dependent hydrolase"
                     /protein_id="HDC2864209.1"
                     /translation="MTGKTHASCGMLVGALTTQYFQTDIFSSVTVIILATLASLLPDI
                     CHTQSKIGRRFKVISFFVRLIFGHRTFTHSILFIAIIAFLLQIIQTPNYYMAAIIIGL
                     VSHVILDMITPKGVKLFYPLPFNVKTPIQFKTGGLVDLSLATALMVGTVYVLFQPFIN
                     DIISNWNTKFL"
     gene            8101..8361
                     /locus_tag="O7798_001954"
     CDS             8101..8361
                     /locus_tag="O7798_001954"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500896.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDC2864210.1"
                     /translation="MAMTVKKDNNEVRIQWRVADIKIPTSEIKNITQDQDIHAVPKLD
                     SKDVSRIGSTFGKTNRVIIDTEDHEYIIYTQNDQKVYNELTK"
     gene            complement(8493..9863)
                     /locus_tag="O7798_001955"
     CDS             complement(8493..9863)
                     /locus_tag="O7798_001955"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001670170.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YjiH family protein"
                     /protein_id="HDC2864211.1"
                     /translation="MDSFSRKEIVIGRLKFITMSLIGILLFLVPIPVEQDGQKQTTLP
                     VAFLAGVLKDVLGGVMPFLIVTIITLSGIITLICSTILKDKLKPDGLMNNAFNVRIGW
                     LILRILAVVFAWMTFLRIGSKVIYSDETGGLLFSSLLPTLVAVFLFAALFLSLLMEYG
                     LLEMLGPIFRPVMRPLFTLPGRSTVDNLASFIGDGTVGVLITSRQYGEGYYSRREATV
                     ISTTFSVVSITFAIVVAETVHMQNQFFAFYLSVIVSCLVAAVIMPRIWPLNKIPDEYA
                     KEVPESARTEALPEGKTALRHGFDTATEVGIKAPGVIDFFKSGLKTVIDMWFVILPVV
                     MSIGTIATIIANYTPFFVILGKPFVPFLELMQIPEAAQASQTIIIGFADMFLPSILIE
                     GVQNDITRFVIGALSISQLIYLSEVGGVILGSKIPVSIGKLFMIFLIRTIITLPIISL
                     MAHLLL"
BASE COUNT         3544 a         1859 c         1313 g         3227 t
ORIGIN      
        1 atagttacgt ttttggaatt aacgttgaca tattgtcatt cagttttcaa tgttcattaa
       61 tgttcaatct cttttattct acttcattta tttcttgaag tcaataactt tttgaacgat
      121 tactttattt attctatatt gtttttatag ttatttcaat ggtaagtttt acacttttga
      181 aattcttctt taaaaacaac tgcgtcgttt ttgacgactt tatcatatta tcaactttgg
      241 aatttaaagt caataacttt tttaaaaact ttttgtgttc acaacccgct tctttttcaa
      301 cgcgtttatt gcttaacaca agaacttatt ttaccagcat tccaaaacaa atcaacataa
      361 aaacgtacaa aataaaagta attttgtacg tttagcatat attataccta tttatttgta
      421 gcagctataa ctttttgtgc aatcgagcta taaattttac ctagacgatc atctgattga
      481 tatattgacg gtgcaaaatc ttttggattc caagatggtt gctctaaagg taattcccca
      541 agtaattgag tattaagttc atcagctaac ttagtaccgc cacctttgcc aaagacatat
      601 tctttattac ccgtctcttt actttcaaaa taactcatgt tttcaattac gccaagaata
      661 gaatgatccg tatgttttgc catcgcacct gcgcgagctg caacaaatgc tgctgtagga
      721 tgaggtgtcg ttacaataat ttccttactt gaaggtaaca tcgtatgaac atctaaagct
      781 acatctcctg ttccaggtgg aagatcgagt attaaatatt caatgtctcc ccatttaact
      841 tctgtaaaga aattcgtcaa cattttacct aacattggcc ctctccatat aactggcgca
      901 ttttcttcca caaaaaaggc cattgatata actttaacgc catgacgttc aactggaatt
      961 acttccttcc ctttaattcc aggcttttca tcaataccca tcatatctgg tacactaaat
     1021 ccatatatat cggcatctac taatccgact tttttccctt cacgagctaa ggcaacggct
     1081 aaatttactg caacagtaga tttaccgaca ccacctttac cggaggctat tgcaataaat
     1141 tcgactggat tattttgaga taataggcct tctatcgttt taggtttatt ttcttctttt
     1201 ggtttaaatt gatttacttt ttcttccggc aatgtttcaa atcgtatacc gaccgttttc
     1261 gcaccgtttt cttttaatgc attaacaaca gccatctgta aatctaattg cggtgcacca
     1321 cctaattgtg ccattgctaa tttaacactc acatgttctt tttcttcctt aatagaaact
     1381 tcaacaatac cttctgtttc ttttaaaggc acatctataa taggatcttt aatttctcct
     1441 accaattctt tcacttgatc taccgttaac aaagcaaatc ccccttaatc attttaagac
     1501 atctacatca tagcaaataa caatttttgc ttagtctatc actaaaagta taaaactttt
     1561 tattaaataa aaaaagcagt tagcctatta ttttaaatag accaactact ataattattt
     1621 taaaatttcc ttctattact ttctatttct ttaggttctc ttataaaaag tgctatcaca
     1681 taagctgcca taacaagcac agctacaaaa gcaaatgaga tatccacccc tatagcaatg
     1741 gattgctgtt taatttcagt tgcagttaaa tgcgatggcg atgtagataa aaatattttt
     1801 gcaccaaaac tcattaatgt aaccattaaa gctgtgccta gtgaaccagc cattacacga
     1861 ccaaagttca taatagccgt gccatgtgag atttcttcat ttctcaaaga attaattcct
     1921 gtagtattta tcggcatcat gagtaaagaa actgaaaaca ttctaattgc atatacgact
     1981 attaaatacg tataagatgt gtctgtatgc aagaaacaca acataattgt agtaattgtt
     2041 aaaattgtaa aaccagtata aatcaatggt ctaggaccat acttatcata aaatttacct
     2101 gtaaaaactg acataatacc atttattatt gcaccaggca tgataacaag tcctgataac
     2161 aaggcagata aagataaact gttttgaaca tatagcggta taagcagcgc aggtccaacc
     2221 attgacatca ttataatcat tgaactaatc gtacataatg caaatgttct atttttaaaa
     2281 acccttaaat ttaaaagtgc attagtaata ttaaattgtc tacgtataaa taaatagata
     2341 ataaccatac ttaatatcaa cgcacctatt actattggac ttgtaaatcc taaatctcct
     2401 gcactactaa atgcgtatag cattaacccg aacccaatag ttgaatacat tactgaacgc
     2461 ttatctaatt tcgtatattt cacttcattg taactcgaga ttgaaaccaa accgaaaaca
     2521 aaggcaagta tagcaattcc tacaattata ataaatggaa ctcgccaact cgcttgatca
     2581 ataattaatc ctgtaactgt aggtcctatt gctggtgcaa attgaattac taaacctgct
     2641 agtcccattg caaaacctcg atgttcttta ctgaacaatg taaataacgt aaattgcatt
     2701 aagggcataa gtacgcctgc acccatcgct tgaattacac gagctaacat taaaactcca
     2761 aaattcggag ctaaggctgc aacaatagaa cctaataaaa atgtccccat cgccgctaag
     2821 tataaaggtc tagttttaat tctatccatt agatatgccg tcagaggtat catgacgcca
     2881 ttaacaagca taaacccagt aactagccat tgcgatgtac tttcattgat atttaattct
     2941 ctcattatac taggtaacgc tgtatttaat aatgtttgat ttaaaatagc tacaaactca
     3001 ctaatcaaca taacagcaac tatgaagttt cgtctccggg ttgttaattc aactttagcc
     3061 atcataattc ctccttttta aaacagatat acacttgtcc ctttaatacg tatagccatg
     3121 aacataatgg gagtagtact caaataataa agaagcacta cataataaat cattattggt
     3181 tcttacacat taggcacagc taatgtgtac ttaaaaacta acaatataac attgtagggc
     3241 ctaataattt attttatgtc tcagactcat acaatggtta tttaacttat ttaccacaaa
     3301 ttgagcacta agactcacta ttatcgattc ttctattgaa caaaaagaag ttggaacaca
     3361 tatgtgccct caacttcaga tatctatttt ctattattta aatttttact ttcagggtaa
     3421 aattgaagct tacaaacata taagaaccct ataataacca tgatgaccca aaaatcgata
     3481 ttgatataca catagttcag atgaataata aaataaaata acgttgttgc aactgtgtaa
     3541 gaaatcaaat gaaaagtcgc gcctctaaaa tatgcatttt caggcaacat ttttctaaaa
     3601 taatccatta aatgctcgac tgcaaatatg atgaagtacc caaagattat ataactgcca
     3661 taatataata ggttatcgta catacttcta ttatatgtaa agtcacccaa cctaaaataa
     3721 ataagtattc tacttaatcc atataaacca aaccctagaa atgttaaaaa aatcgcacca
     3781 gaaagtacaa aaataaagag aacaatcatt gtagttaaca agttataaaa cttatgttta
     3841 agataattca caatcattgg cctccttatt aataaaatat tgaacgattt atctagtatc
     3901 taggaaattt attatttctt actttaatta cactacatca attttaatca taattctatt
     3961 cttttgattg agatgactgt tctttaaaaa atacgaccca taaaacaata agcccaatgc
     4021 taattacagc aacagcactt aacacattgt gtaagtttgg accaaagatt cctgattgta
     4081 tcgcataaag atatcccatt attgttgaac ctattgatgc cccaagattt ttagttaatc
     4141 cataaaatga catcattttc ttcatttgta atgggctagt ttcctcttgg acaatcacac
     4201 tatctttcgt ataaatatat ccaaaactta atcctgccaa aattaacaca aatgctataa
     4261 gtaccggcaa tttaatacca aatgaaatga taatactact tactagtagc aatgtaaatg
     4321 atagtaagta aataactttc cttgatagtt ttgcttcaat tcgatgtaaa ttaaaattca
     4381 atgtaatcca agctacagat aaaggaaaaa taaccaatcc actttgcaat ggagataatc
     4441 ctagttgttc ttgaaggtag actggaatat ataaattgaa tcccattaaa caaatagctg
     4501 ttagaaggtc agttataaaa actaaagtaa tcgaacgatt aaattcaacc acaggtaaaa
     4561 atggtgaaga aacatgtttt tctactttaa ataaacacat tgccacaacg atagctaaga
     4621 taaaactcaa gaaatttaaa agtaacagct gttggtttaa taaagcaaac ataatcaatc
     4681 caataaatac ataaaatagc gtgagccctt tagtatcaaa ttttgattta gcaactgttt
     4741 cttcctctgg aaaatgaaat gtccatataa ctaatataat ggcaatgatc gcaatcggta
     4801 tatttatgta gaataaccaa tgccatgttg caaattctaa tataccacca cctagaagtg
     4861 gcccaatgat actcgaaata ccccaaacac tgccaactat gcccataatt ttatatcgta
     4921 acggaatttc aaatgctaac tttggaacaa tttgcgataa tgacatcaat acacctgatc
     4981 caaaaccttg tatcacgcgt gatataatta gcatagtaaa attagtactt aaaccacaca
     5041 taaaactacc tatactaaat aaaagtaatc ctgcaattgc cacataaata attttaaatc
     5101 tcgaaagtaa ttcgcccact ataggattgg caattactaa tgcgataaaa tacgctgtga
     5161 aaattaatga aattaaattt cctgcattta aatcttgttt aattgtaggt aatgcaagcg
     5221 aaataataga tgattcaatc gctgacataa acataattaa tattaaagct ataacagtta
     5281 tgattgactt taatcgcatg aaatacctcc ttctatatat ttatttataa gattttattt
     5341 acaaataatt ggttttcata tgtataaaca cttttgactt tcaaatctta acgataattc
     5401 tattacaata caatccccta ttagaatgat ttatgtaata aaaaaagcgg agtttccccc
     5461 agcttttcta aacgactaca taaaatataa gattgcaatt aaatgcaata gtgatgctat
     5521 tacaataaaa atatgccaaa tcatatgaaa atatggtcta ttcttttgtg cataaaacca
     5581 tgcaccaatt gtataagaca caccacctaa gaaaatgaat aatatgaata tccatgatgt
     5641 gcgaataaaa ataattggta acaagataat acctacccag cccatcacta aatagacaat
     5701 taagcttaac ttttggttaa ctttgacagc tatggattta tataaaatcc cccaaagtgt
     5761 cgttccccat aataaaataa atactgtcca acctatccaa ccacctacaa ctgttaacaa
     5821 aataggcgta tatgtaccag aaattgctac gtaaatcata ctgtgatcga taatccttaa
     5881 aatatattta tgaggtgttt cattttgcat agaatgataa atagtagatg aaataaacat
     5941 cataaagata gaaataacat aaatagacat actcacagac gcaagcatac catgtgcaat
     6001 ataactgtgc acagccgcat agggtaacac taataatgtt aacaaagctg caacaccatg
     6061 agatgccgca ttaccaattt cttctccaaa tgataaaggg atgatatcct taaatgtttc
     6121 tacgattgtg tcattacttt ttttagttga tttggacatc atagtcaccg cctatcatta
     6181 aattaaaccc attctacgta aatcttctgt tgcagttgca acactatctt taccttcttt
     6241 atttttaaga ggtgaaaatt cttcttctct aggaacttgt aacgtgacaa aactagttcc
     6301 ataagtaaat atgtcaaaat agaacaattc gaattttaaa gttggttgtt caataacacc
     6361 aaagttctca tctaattgct tcaaattctt aatagctaaa tgataaggta actcacgatt
     6421 tacagcgttt aaaataaaac caagtttaaa tgcatgaata ccgatattag cattgttaaa
     6481 ttgatttgca acttctggat ctaattctga atactccagt actgtatctt tacaatcgac
     6541 attaactaaa cgtccaacac tttctcctgg ttttggttga atcgttttag aagtaatatc
     6601 gtaatcatgt tctaccgtaa atcctgcaaa tagtggatcc aacactctta ctaaaacatt
     6661 gtcgatatta ttcaagaaaa tatacttaac gccattatta gacatttctt ctaagtatcc
     6721 tgccttgtct aaagatttaa acacgccacc attaccattc ggcgtttcca taatacgacc
     6781 ctgttgattt aaaattaact tcccttcttc actaagcgcc acaatattat cttgtttaaa
     6841 gaaatggatt gcttcttgat catatccaaa ataactatgt gcttcgaaat aagctaaagt
     6901 ttcttcatga ttgatatcac ttgtcataat ataccattga atcgtatgtc cagattgatg
     6961 attcaatgtt tttaattggt tagcttgaag ttcaaataaa cttacacctt caatttcaaa
     7021 cgaaccttta gggcccttgt aaccaagtct tgttccttga ccacctgcca tcaaaagtac
     7081 tgcaaattgt ccttctttaa tagcttgaag tccttgttcc tctaaacgct taatctcatc
     7141 atcactcatt tgtgatttaa tatcatattt cacttcagaa actgcagata catcatctat
     7201 tgttttctta ttgatgtata aatcgttata taatttggca ataaaatcta aatctaatga
     7261 cgctaccttc tcttcaagtg cttctttttc attgttactc attatttttt catattcaca
     7321 caaatgatct tgtttatatt tagctaattg atttttatct agcattttat gcctcctgct
     7381 gagtttgtaa cctttaataa tttattttct ataaaaactt agtattccag ttgcttatta
     7441 tatcattgat gaaaggctga aataaaacat aaactgttcc gaccattaac gctgtagcta
     7501 aagataagtc tacaagtcca cctgttttaa attgaatcgg tgtcttcaca ttaaacggta
     7561 acggataaaa taatttcacg ccttttggtg ttatcatatc tagtataaca tgtgacacta
     7621 atccaattat aattgctgcc atataataat taggcgtctg aataatttgc aataaaaatg
     7681 ctatgattgc gataaataat attgaatgcg taaaggttcg atgtccaaag atcaatctca
     7741 caaaaaaact aattacctta aaccttctgc caatcttact ttgagtgtga catatatcgg
     7801 gtaataagct agctagagtt gctagaatga taaccgtaac cgacgaaaaa atatccgttt
     7861 gaaaatattg tgttgttagc gctccaacga gcatgccgca tgaagcatgt gttttacctg
     7921 tcatatttgt tctcctttaa tactcacatt ttaccacatc cctaacaaaa acacgaacat
     7981 attttcgggt taaaattcat tagtatgaca caatttaaaa aagtatcaca taactcttga
     8041 aaacgattac aaaatcgttt atgatgtatt tacaaaatat ttaaaggatg tgtttgaata
     8101 atggcaatga cagtaaaaaa ggataataat gaagtgcgta ttcaatggag agttgctgat
     8161 atcaaaattc ctacaagtga aattaaaaat attacacaag accaagatat tcatgcagtt
     8221 cctaaattag acagcaaaga tgtatctaga atcggctcaa cgtttggtaa aacgaatcgc
     8281 gttattatcg atactgaaga ccacgaatac attatttata ctcaaaatga tcaaaaagtt
     8341 tacaatgaat taactaaata aattgtataa aaaaatcatt catggtgagg gcttcatgaa
     8401 tgattttttt aattgattca acacccagca taaacaaata caaaaggaca actgttccca
     8461 taattttaac agttgtcctt tttcacatat atttataaca aaagatgtgc catcaaagaa
     8521 ataattggta gtgtaatgat tgttctaatc aagaaaatca taaacaattt gccgatgctt
     8581 acaggaatct tcgaaccaag tatgacgcca cctacttcag acaagtatat taactgcgat
     8641 atactaagtg ccccaataac aaaacgagtt atatcatttt gtacaccttc aattaatata
     8701 gaaggtaaaa acatatcggc aaaaccgata ataatcgttt gagaagcctg tgccgcttca
     8761 ggtatttgca ttaactctaa aaatggaaca aaaggtttac ccaatatgac aaaaaagggc
     8821 gtgtagttcg caataatggt agcaatagta ccaatactca ttactacagg caaaataaca
     8881 aaccacatat caatgactgt ttttaatcct gacttaaaaa agtcaataac gcccggtgct
     8941 ttaataccta cttctgttgc agtatcaaag ccatgtctca atgccgtctt tccttctggc
     9001 aatgcctcag tacgcgcact ttcaggtacc tccttagcat actcatcagg aattttattt
     9061 aaaggccaaa ttcttggcat aatgactgct gcaacgaggc aggatactat cactgataaa
     9121 tagaaagcaa aaaattgatt ttgcatgtgc actgtttcag caactacaat tgcaaaggtg
     9181 atagaaacta cactaaatgt cgttgaaata actgttgcct cacgacgaga ataatatcct
     9241 tcaccatatt gtctacttgt aattaagaca ccaacagttc cgtctccaat aaatgatgct
     9301 aaattatcta ccgtcgaacg tcctggcaat gtaaataaag gtctcataac cggtctaaaa
     9361 ataggaccca acatctctaa caaaccgtat tccattaata gcgataaaaa tagagctgca
     9421 aataagaata ctgccactaa tgttggcaat aaacttgaga acaataatcc acccgtttca
     9481 tctgagtaaa taacctttga accaattcgt aaaaatgtca tccatgcaaa aacaactgct
     9541 aatattcgta aaattaacca accaattcta acgttaaaag cattgttcat tagcccgtca
     9601 ggtttcaatt tatcttttaa aatagttgaa caaatcagag ttatgatacc cgataaagta
     9661 attatcgtca caattaaaaa tggcattacg ccacctaata catctttaag cacgcctgct
     9721 aaaaatgcca cgggcaacgt tgtttgcttc tgtccatctt gttcgactgg aattggtact
     9781 aaaaataata agataccaat taaagacatc gtaataaact taagtctccc aataactatc
     9841 tctttccttg aaaagctatc cataaaatca atccatttct ctatgtattc gttttaagta
     9901 tatacagaat tctattcagt taacaaacat attccttatc att
//
LOCUS       DALPQQ010000096         9717 bp    DNA     linear   BCT 22-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus strain K18-6-464
            SAMD00233528-rid16434743.denovo.096, whole genome shotgun sequence.
ACCESSION   DALPQQ010000096 DALPQQ010000000
VERSION     DALPQQ010000096.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMD00233528
            Sequence Read Archive: DRR236061
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 9717)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9717)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001543423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001543423.1
            Genome Coverage       :: 77x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/22/2022 17:09:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,811
            CDSs (total)                      :: 2,743
            Genes (coding)                    :: 2,689
            CDSs (with protein)               :: 2,689
            Genes (RNA)                       :: 68
            rRNAs                             :: 2, 4, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 4, 2 (16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 54
            CDSs (without protein)            :: 54
            Pseudo Genes (ambiguous residues) :: 0 of 54
            Pseudo Genes (frameshifted)       :: 27 of 54
            Pseudo Genes (incomplete)         :: 27 of 54
            Pseudo Genes (internal stop)      :: 10 of 54
            Pseudo Genes (multiple problems)  :: 10 of 54
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9717
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMD00233528-rid16434743.denovo.096"
                     /strain="K18-6-464"
                     /db_xref="taxon:1280"
                     /geo_loc_name="Japan: Niigata"
     gene            complement(302..2758)
                     /locus_tag="O7798_001956"
     CDS             complement(302..2758)
                     /locus_tag="O7798_001956"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499078.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent Clp protease ATP-binding subunit"
                     /protein_id="HDC2864212.1"
                     /translation="MLFGRLTERAQRVLAHAQEEAIRLNHSNIGTEHLLLGLMKEPEG
                     IAAKVLESFNITEDKVIEEVEKLIGHGQDHVGTLHYTPRAKKVIELSMDEARKLHHNF
                     VGTEHILLGLIRENEGVAARVFANLDLNITKARAQVVKALGNPEMSNKNAQASKSNNT
                     PTLDSLARDLTVIAKDGTLDPVIGRDKEITRVIEVLSRRTKNNPVLIGEPGVGKTAIA
                     EGLAQAIVNNEVPETLKDKRVMSLDMGTVVAGTKYRGEFEERLKKVMEEIQQAGNVIL
                     FIDELHTLVGAGGAEGAIDASNILKPALARGELQCIGATTLDEYRKNIEKDAALERRF
                     QPVQVDEPSVVDTVAILKGLRDRYEAHHRINISDEAIEAAVKLSNRYVSDRFLPDKAI
                     DLIDEASSKVRLKSHTTPNNLKEIEQEIEKVKNEKDAAVHAQEFENAANLRDKQTKLE
                     KQYEEAKNEWKNAQNGMSTSLSEEDIAEVIAGWTGIPLTKINETESEKLLSLEDTLHE
                     RVIGQKDAVNSISKAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALAESMFGDD
                     DAMIRVDMSEFMEKHAVSRLVGAPPGYVGHDDGGQLTEKVRRKPYSVILFDEIEKAHP
                     DVFNILLQVLDDGHLTDTKGRTVDFRNTIIIMTSNVGAQELQDQRFAGFGGSSDGQDY
                     ETIRKTMLKELKNSFRPEFLNRVDDIIVFHKLTKEELKEIVTMMVNKLTNRLSEQNIN
                     IIVTDKAKDKIAEEGYDPEYGARPLIRAIQKTIEDNLSELILDGNQIEGKKVTVDHDG
                     KEFKYDIAEQTSETKTPSQA"
     gene            complement(2772..3779)
                     /locus_tag="O7798_001957"
     CDS             complement(2772..3779)
                     /locus_tag="O7798_001957"
                     /EC_number="2.7.14.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499077.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein arginine kinase"
                     /protein_id="HDC2864213.1"
                     /translation="MTHNIHDNISQWMKSNEETPIVMSSRIRLARNLENHVHPLMYAT
                     ENDGFRVINEVQDALPNFELMRLDQMDQQSKMKMVAKHLISPELIKQPAAAVLVNDDE
                     SLSVMINEEDHIRIQAMGTDTTLQALYNQASSIDDELDRSLDISYDEQLGYLTTCPTN
                     IGTGMRASVMLHLPGLSIMKRMTRIAQTINRFGYTIRGIYGEGSQVYGHTYQVSNQLT
                     LGKSELEIIETLTEVVNQIIHEEKQIRQKLDTYNQLETQDRVFRSLGILQNCRMITME
                     EASYRLSEVKLGIDLNYIELQNFKFNELMVAIQSPFLLDEEDDKSVKEKRADILREHI
                     K"
     gene            complement(3769..4335)
                     /locus_tag="O7798_001958"
     CDS             complement(3769..4335)
                     /locus_tag="O7798_001958"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000882074.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UvrB/UvrC motif-containing protein"
                     /protein_id="HDC2864214.1"
                     /translation="MLCENCQLNEAELKVKVTSKNKTEEKMVCQTCAEGHHPWNQANE
                     QPEYQEHQDNFEEAFVVKQILQHLATKHGINFQEVAFKEEKRCPSCHMTLKDIAHVGK
                     FGCANCYATFKDDIIDIVRRVQGGQFEHVGKTPHSSHKKIALKRKIEEKNEYLKKLIE
                     IQDFEEAAIVRDEIKALKAESEVQHDDA"
     gene            complement(4354..4815)
                     /locus_tag="O7798_001959"
     CDS             complement(4354..4815)
                     /locus_tag="O7798_001959"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000551761.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CtsR family transcriptional regulator"
                     /protein_id="HDC2864215.1"
                     /translation="MHNMSDIIEQYIKRLFEESNEDVVEIQRANIAQRFDCVPSQLNY
                     VIKTRFTNEHGYEIESKRGGGGYIRITKIENKDATGYINHLLQLIGPSISQQQAYYII
                     DGLLDKMLINEREAKMIQAVIDRETLSMDMVSRDIIRANILKRLLPVINYY"
     gene            4973..6187
                     /locus_tag="O7798_001960"
     CDS             4973..6187
                     /locus_tag="O7798_001960"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499074.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NupC/NupG family nucleoside CNT transporter"
                     /protein_id="HDC2864216.1"
                     /translation="MHILIGIIGIIFFLALAFLFSSDRKNIRWKYVGILLAIQLIFAF
                     ILLKTTMGIKVIGGISNGFNYLLLKAADGVNFVFGGIQYIDPKQPPFFFSVLLPIVFI
                     SAIIGILQYTKILPLIINVLGFLISKINGMGRLESYNAVAAAILGQSEVFISIKKQLP
                     YIPKQRLYTLTASAMSTVSASIIGAYFTLIEPKYVVTAVVLNLFGGFIIASIINPYKV
                     NEEDDKLLVEETEERQQSFFEMLGEYILDGFKVAVIVGAMLIGYIAIIALLNGIVSNI
                     FSTVSGGAISWDFQTLIGFVFAPFAFLVGVPWQDAVQAGSVMATKLLSNEFVAMQALG
                     KLSDLSEHAKGVTSVFLVSFANFSSIGIISGAIKSLNDKKGDTVARFGLKLLFGATLV
                     SFISAAIAGFFI"
     gene            complement(6395..6955)
                     /gene="pdxT"
                     /locus_tag="O7798_001961"
     CDS             complement(6395..6955)
                     /gene="pdxT"
                     /locus_tag="O7798_001961"
                     /EC_number="3.5.1.2"
                     /EC_number="4.3.3.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499073.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxal 5'-phosphate synthase glutaminase
                     subunit PdxT"
                     /protein_id="HDC2864217.1"
                     /translation="MKIGVLALQGAVREHIRHIELSGHEGIAVKKVEQLEEIEGLILP
                     GGESTTLRRLMNLYGFKEALQNSTLPMFGTCAGLIVLAQDIVGEEGYLNKLNITVQRN
                     SFGRQVDSFETELDIKGIATDIEGVFIRAPHIEKVGQGVDILCKVNEKIVAVQQGKYL
                     GVSFHPELTDDYRVTDYFINHIVKKA"
     gene            complement(6959..7846)
                     /gene="pdxS"
                     /locus_tag="O7798_001962"
     CDS             complement(6959..7846)
                     /gene="pdxS"
                     /locus_tag="O7798_001962"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011303857.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxal 5'-phosphate synthase lyase subunit
                     PdxS"
                     /protein_id="HDC2864218.1"
                     /translation="MSKIIGSDRVKRGMAEMQKGGVIMDVVNAEQARIAEEAGAVAVM
                     ALERVPSDIRAAGGVARMANPKIVEEVMNAVSIPVMAKARIGHITEARVLEAMGVDYI
                     DESEVLTPADEEYHLRKDQFTVPFVCGCRNLGEAARRIGEGAAMLRTKGEPGTGNIVE
                     AVRHMRQVNSEVSRLTVMNDDEIMTFAKDIGAPYEILKQIKDNGRLPVVNFAAGGVAT
                     PQDAALMMELGADGVFVGSGIFKSEDPEKFAKAIVQATTHYQDYELIGRLASELGTAM
                     KGLDINQLSLEERMQERGW"
     gene            7950..9332
                     /locus_tag="O7798_001963"
     CDS             7950..9332
                     /locus_tag="O7798_001963"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499071.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PLP-dependent aminotransferase family protein"
                     /protein_id="HDC2864219.1"
                     /translation="MKNTLYHQLYEKLKKQIIEGQFKEGDKFYSKRQLSKHLSISQTT
                     VEHAYQLLLDEGYIYSRPRSGYFVSEIESLTILNNQPIPSLFDDDSYKPKASDEAYDY
                     AFNLDEIDTKHFPIELFRKYSKDLYDTNHLNQLRRGHFQGELHLRFQLAFYLFTNRGV
                     ICDPNQIIIGSSTEQLVNQLVDLLYTSTFIIEKPSYPPIKNILDKKQVEYEQIEVEDN
                     GINVDEVIKSQKNIVYITPSHQFPTGYVMDLKKRTQLIQWAQEKEERFIIEDDYDSEF
                     RYFGKPIPAIQGLYSRGEKVIYISTFSKSIFPSCRVAYMVLPYSIMKKYHSQNHIEGN
                     TVPVHMQNLIATFISSGGFERHLNKMRRIYRRKLTYILKRLKPYKEQLDIQGAETGMH
                     FTITVKNGLTLQECLDRANKVKLKLQVYNFDDDQDYKKTPKFILGFGGIDDDALKPHV
                     DALIKSLIIK"
BASE COUNT         2986 a         1817 c         1356 g         3558 t
ORIGIN      
        1 caaagataaa atcttaataa tttcttagta aactcttttc tctagattta tcacaatatt
       61 atatagacct attttatttt gacgtaagtt gctagtatct tcaaacaaaa aacctttata
      121 aaaattcata cctttatgct atcgctgtag gctcattaac ttgttacata taattcttaa
      181 ctatcctttg atgattgttt tattagattg tttcgttgat ggatactttc acgaatttct
      241 atagttcaat gctactaaaa aaacagccca aaactttaat ttgttttgga ctgttttata
      301 attatgcttg cgatggtgtt ttagtttctg aagtttgttc agcaatgtca tatttaaact
      361 ctttaccatc atgatctact gtaactttct taccttcaat ttgattacca tctaatatta
      421 attcacttaa attatcttcg atagtttttt gtatcgctct aattaatggt cttgcaccat
      481 attctggatc atatccttct tctgcgattt tgtctttcgc tttatcagtt acaataatat
      541 ttatgttttg ttcagataat cgatttgtta atttattaac catcattgtt acaatttctt
      601 ttaattcttc ttttgttagt ttatggaata caatgatatc atctacacgg tttaaaaatt
      661 ctggacggaa tgaatttttt aattctttta acatcgtttt tcgaattgtt tcataatctt
      721 gtccatcact tgaaccaccg aatccagcaa atcgttgatc ttgtaattct tgtgccccaa
      781 cgtttgatgt cattatgata attgtatttc tgaaatcaac tgtacgtcct tttgtatctg
      841 tcaaatgtcc atcatctaaa acttgtaata gaatattaaa tacatctgga tgagcttttt
      901 caatttcatc aaataaaatt acagaatatg gtttacgtct aactttttca gttaattgtc
      961 caccatcatc atgaccaaca tatcctggag gagcaccaac taatcggctc actgcgtgtt
     1021 tttccataaa ttcactcatg tctacacgga tcatcgcatc atcatcgcca aacattgatt
     1081 cagctaaagc tctagctaat tcagttttac caacaccagt tggtccaagg aagataaagc
     1141 taccaattgg tcgtttagga tcttttaacc ctgcacgggc acgtctaacc gctttactga
     1201 ttgaattaac agcatctttt tgcccaataa ctctctcatg taatgtatct tctagactaa
     1261 gaagtttttc agattctgtt tcattgattt tagttaatgg gatacctgtc catcctgcaa
     1321 taacttcagc aatatcttct tctgacaatg aagttgacat gccattttgt gcattcttcc
     1381 attcattttt agcttcttca tattgctttt caagttttgt ttgtttatca cgcaggttag
     1441 cagcattttc aaactcttga gcatgtactg cggcatcttt ttcattttta actttttcaa
     1501 tttcttgttc aatttctttt aaattattag gtgtcgtatg actcttaagt cttactttag
     1561 aacttgcttc atcaattaaa tcaattgctt tatctggtaa gaaacgatct gaaacgtatc
     1621 tgttacttaa tttaacagct gcttcaatag cttcgtctga aatattaata cgatggtgtg
     1681 cttcgtaacg atctcttaat ccttttaaaa tagcaactgt atctactact gaaggttcat
     1741 caacttgtac aggttggaaa cgacgttcta aagccgcgtc tttttcaata tttttgcgat
     1801 attcatctaa tgtagtagca ccaatacatt gtaattcacc acgtgctaat gccggcttca
     1861 aaatattcga agcatcgata gcaccttcag caccaccagc accaactaaa gtatgcaact
     1921 catcaataaa taggatgaca ttacctgctt gttggatttc ttccataacc tttttcagac
     1981 gctcttcaaa ttcaccacga tatttagtac ctgcaactac tgttcccata tctaaagaca
     2041 taacacgctt atcttttaat gtctctggta cctcattatt cactatggct tgcgctaaac
     2101 cttcagcaat agcagtttta ccaacacctg gctctccaat aagcacagga ttgtttttcg
     2161 tacgtctact taatacttca attacacgtg taatttcttt atcacgtcct ataacaggat
     2221 ctaatgtacc gtctttggca atgactgtta agtcacgagc taaactatct aaagttggag
     2281 tattatttga cttactagct tgtgcatttt tattactcat ttcagggttt cctaaagctt
     2341 tcacaacttg tgcacgtgct ttagtaatat ttaaatctag atttgcaaaa actcttgctg
     2401 caacaccttc attttcacga atcaagccta ataaaatatg ttccgttcca acaaaattgt
     2461 gatgtaattt tctagcttca tccatcgata attcaatgac ttttttagct ctaggtgtat
     2521 aatgcaatgt accaacatga tcttgaccat gtccgattaa tttttcaact tcttcaatta
     2581 ctttatcttc agtgatatta aaactttcta atacttttgc agcaattcct tcaggttctt
     2641 tcattaaccc caataatagg tgttctgttc ctatatttga atgatttaaa cgaattgctt
     2701 cttcttgggc atgtgctaat acgcgctgtg cacgctcagt taatctacca aataacataa
     2761 ataatgacct cctactttat atgttctctt agtatatctg ctcgtttttc ttttacagat
     2821 ttgtcatctt cttcatctaa taaaaatggt gactgtatag ctaccatcaa ttcattaaat
     2881 ttaaagtttt gtaattcaat gtaatttaaa tctataccaa gtttaacttc gcttaatcta
     2941 taagaagcct cttccatagt tatcattcta cagttttgta aaatacctag cgagcgaaaa
     3001 acacggtctt gtgtttctaa ttgattataa gtgtctaact tttgtcgtat ttgtttttct
     3061 tcatgaatga tttgattaac aacttctgtt aatgtttcta tgatttctaa ctcagattta
     3121 ccaagtgtaa gttggttgga tacttgataa gtatgtccat aaacttgcga accttcaccg
     3181 taaatacctc tgattgtata tccaaaacga ttaatggttt gagcaatccg tgtcattctt
     3241 ttcataatag atagacctgg caaatgtagc atcacgcttg ctctcatacc agtacctata
     3301 ttggtaggac atgtagttaa ataaccaagt tgttcatcat aacttatatc aaggcttcga
     3361 tctaattcat catcaattga tgaagcttga ttatataaag cctgtaatgt cgtgtcagtt
     3421 cccatagctt gaatacgaat atggtcctct tcatttatca tgacacttaa agattcatcg
     3481 tcattcacta atactgcggc tgctggttgt tttattagtt caggactaat caaatgcttt
     3541 gcaaccattt tcattttact ttgttgatcc atttgatcaa gacgcattaa ttcaaagttt
     3601 ggcaaggcat cttgtacctc atttataact ctaaatccat cattttcagt agcatacatt
     3661 agtggatgca catgattttc taaattacgc gctaaccgaa ttctagaaga cataacaatt
     3721 ggtgtttctt cattactttt catccattgg ctgatattat catgaatatt atgcgtcatc
     3781 atgttgcacc tcactctcag cttttagtgc tttaatttca tctctaacaa tggctgcttc
     3841 ctcaaaatct tggatttcaa taagtttttt caaatattca ttcttttctt cgatttttcg
     3901 ctttaaagct atctttttat gtgaagaatg tggtgtcttt ccaacgtgct caaattgtcc
     3961 accttgaact ctgcggacga tatcaatgat gtcatcttta aatgttgcat aacaattagc
     4021 acacccaaat ttaccaacat gtgcaatatc tttcaaagtc atatgacatg atgggcaacg
     4081 tttttcttct ttaaacgcta cttcttgaaa attaattcca tgtttcgtag ctaaatgttg
     4141 taaaatttgc ttaacaacaa atgcttcttc gaaattatct tgatgttctt gatattcagg
     4201 ttgttcatta gcttgattcc acggatggtg cccctcagca caagtttgac acaccatttt
     4261 ttcttctgtt ttatttttac ttgtaacttt aacttttaat tccgcttcat taagttgaca
     4321 attttcacaa agcacttcaa cacctcattt catttagtaa taatttataa ctggtaacaa
     4381 acgttttaaa atatttgctc taataatatc tctagaaacc atatccattg atagcgtttc
     4441 tctatcaata actgcttgaa tcattttagc ttcacgttca tttattaaca ttttatctaa
     4501 aagcccatca ataatataat aagcttgttg ttgagaaata gaaggtccaa tcagctgaag
     4561 caaatgatta atataacctg ttgcatcttt attttcaatt ttagtgattc ggatgtaacc
     4621 accaccacca cgtttacttt cgatttcata accatgttca ttagtgaatc gtgttttgat
     4681 tacataattt aattgtgatg gtacgcaatc aaaacgctgt gcgatattcg ctctctgaat
     4741 ttcaacgaca tcttcattcg actcttcaaa taaacgtttg atgtattgtt ctatgatgtc
     4801 agacatattg tgcatgtata tcaccccttt ttgaccttct ttgactatat tatatgacct
     4861 attttgacct ttttcaatta atttgttttt atattttcaa aaatttatga tgttagccct
     4921 tccattttat tgtatgatag attgtagaaa aaactaaagg aatgagaaat atatgcatat
     4981 tctaattggg attatcggaa ttatcttctt tttagcactt gcgtttctat ttagctcaga
     5041 caggaaaaat attcgctgga aatatgtagg aattttactt gcaattcagc ttatctttgc
     5101 atttatcttg cttaaaacta caatgggaat caaggttatt ggtggtattt caaacggttt
     5161 taactactta ttattaaaag cagcagatgg tgttaacttt gtattcggtg gtattcaata
     5221 tatcgatcct aagcaaccac cattcttctt cagtgtatta ttacctatcg tatttatttc
     5281 agcgattatc ggtatccttc aatacacaaa gattttacct ttaatcatta atgttttagg
     5341 attcttaatt tctaaaatta atggtatggg acgtttagaa tcatacaatg cagttgctgc
     5401 agcaattttg ggacaatctg aagtatttat ttcaattaaa aaacaattac catacatacc
     5461 taagcaacgt ttatacacat taacagcttc agcaatgtcg actgtttctg cttcaattat
     5521 cggtgcatac tttaccttaa ttgaacctaa atatgttgta acggctgttg tcttaaactt
     5581 atttggtggt ttcatcatcg cttcaattat taacccttat aaagttaatg aagaagatga
     5641 caaattatta gttgaagaaa ctgaagaaag acaacaatca ttcttcgaaa tgctaggaga
     5701 atatatttta gatggattta aagtagctgt cattgtaggc gcaatgttaa tcggatacat
     5761 tgccattatc gctctattaa atggaattgt aagcaatatc tttagtacag tttcaggtgg
     5821 cgctatttct tgggatttcc aaacattaat tggttttgtc tttgcaccat ttgcattctt
     5881 agtcggtgtg ccatggcaag atgcagttca agccggttca gttatggcga caaaactatt
     5941 atctaacgaa tttgtagcaa tgcaagcact tggtaaactt agtgatttat ctgaacacgc
     6001 aaaaggtgtt acatctgtat tcttagtatc atttgctaac tttagctcta tcggtattat
     6061 ttcaggtgcg attaaatcac ttaatgacaa aaaaggagat acagttgccc gctttggttt
     6121 gaaattatta ttcggtgcaa cactagtatc tttcatttca gctgcaatcg ctggattctt
     6181 tatttaacaa atacatcaac atcgaattaa ccccttcaaa attttgacta ttctcagtct
     6241 ctttgaaggg tttttttctt atgtatagct ttatttttta tcatttttaa ttttgacata
     6301 aaaaataact cctccaaagc taagtttgaa ggagatattt tcttctcaac aaatctataa
     6361 atatcaataa ttcgttgatt tagcatacat taagctatgc tttttttaca atatgattaa
     6421 taaagtaatc agttactcta tagtcatctg ttaattcagg atggaatgat acgcctaaat
     6481 atttaccttg ctgaacagct acaattttct cattaacctt acataggata tctacgcctt
     6541 gacctacttt ttcaatatgt ggggctctta taaagacacc ttcaatatct gtagcgatac
     6601 ctttaatatc taattctgtt tcaaagctgt caacttgtct accgaatgag tttcgttgta
     6661 cagtaatatt caacttgtta aggtatcctt cttcaccaac tatatcttgc gctagaacta
     6721 ttaatcctgc gcatgtacca aacataggta aagttgaatt ttgtaaagcc tctttaaatc
     6781 catataaatt cattaatcga cgtaacgttg tagactcgcc accaggtaat attaagccct
     6841 cgatttcttc taattgttca acttttttaa ctgcaatacc ttcatgacca cttaattcaa
     6901 tatgtctaat atgttcacgt actgcacctt gtaatgctaa tacacctatt ttcatatctt
     6961 accaaccacg ctcttgcata cgttcttcta atgataattg attgatatct aaacctttca
     7021 tagcagtgcc aagttcactt gctaatcttc caattagttc atagtcttgg taatgtgttg
     7081 ttgcttgaac aattgcttta gcaaattttt ctggatcttc tgatttaaaa atacctgatc
     7141 caacgaatac accgtcagca cctaattcca tcattaaagc agcatcttga ggagtcgcaa
     7201 cgccaccagc tgcaaagtta actaccggta aacgaccatt gtctttaatt tgttttaaaa
     7261 tttcataagg cgcaccgata tctttcgcaa aagtcataat ctcatcatca ttcattacag
     7321 tcaatcgact aacttctgaa ttaacttgtc tcatatgtct tacagcttca acaatattac
     7381 ctgtacctgg ttcaccttta gtacgtaaca tagcagcacc ttcaccaatt ctacgcgcag
     7441 cttcacctaa attacgacat ccacatacaa atggtactgt aaattgatct tttcttaagt
     7501 gatattcctc atctgctggt gttaacactt ctgattcatc aatatagtca acacccatcg
     7561 cctctaatac tcttgcttca gtgatatgac caatacgtgc tttagccatg actggaatag
     7621 aaacagcatt cattacttct tctacaattt tagggtttgc catacgtgca acaccaccag
     7681 cagctctaat atcagaaggt actcgttcta atgccataac tgctaccgcg ccagcttctt
     7741 ctgcaattct tgcttgctca gcattaacga catccataat aacgccgcct ttttgcattt
     7801 cagccatacc tcttttgact ctgtctgatc caataatttt actcattata cataaaaccc
     7861 cttttcaagt tgattaaata cattgtaatg tataaactga tatttaaaaa ggtacaaaat
     7921 aagataaatt taggaggtca gttataaaat tgaaaaacac tttataccat caactttatg
     7981 aaaaattaaa aaaacaaata attgaaggtc aatttaaaga aggcgataaa ttttattcta
     8041 aaagacaatt aagcaaacat ttatctatta gccaaacaac cgtagagcat gcatatcaac
     8101 ttctattaga cgaaggttac atttattcaa gacctcgctc tggatatttt gtgtccgaaa
     8161 ttgaatcttt aacaatttta aacaatcaac ctatcccctc tctttttgat gatgattcat
     8221 ataaaccaaa agcgagtgat gaagcttatg attatgcttt taatttggat gaaatagata
     8281 cgaaacattt ccctatagaa cttttcagaa agtattccaa agatctttat gatacaaatc
     8341 atttaaatca attacgtaga ggacattttc aaggagaatt acatttgcgg tttcaactgg
     8401 cattttattt atttactaat cgtggcgtaa tttgtgatcc taatcaaatt ataattggct
     8461 catctaccga acaattagta aatcaattag tcgatttact ttatacttca acatttatta
     8521 tcgaaaaacc tagttatcca ccaatcaaaa atattttaga taaaaaacaa gttgaatatg
     8581 aacaaattga agttgaagat aatggaataa acgtagatga agttattaaa tcacaaaaaa
     8641 atatagtata tataacgcct tcccatcaat ttccaactgg atatgtgatg gacttaaaaa
     8701 aacgaactca attaatacaa tgggctcaag aaaaagaaga acgatttatt atagaagatg
     8761 attatgattc cgagtttaga tatttcggca aacccattcc agcaattcaa ggtctatatt
     8821 caagaggaga aaaagtgatt tatatcagta cattttcaaa gtctattttt cctagctgtc
     8881 gagttgcata tatggtgtta ccctattcta taatgaaaaa atatcattct caaaatcaca
     8941 ttgaaggcaa cactgtacct gttcatatgc aaaaccttat tgcaacgttt atatcttccg
     9001 gtggttttga aaggcattta aataaaatga gacgaattta tcgtagaaaa ctaacctata
     9061 ttttaaaaag attgaaacct tacaaagagc agcttgatat tcaaggtgct gaaacgggta
     9121 tgcattttac aattacagta aaaaatggat taacattaca agagtgtctt gatagagcaa
     9181 acaaagtaaa gttaaaatta caagtttata attttgatga tgatcaagac tataagaaaa
     9241 cccctaaatt tatattaggc tttggcggta tagacgatga tgctttaaaa ccgcatgtag
     9301 acgctctaat aaaatcatta attataaagt aacacttctt tgataaaagt tagtgttact
     9361 tatgcaatag cttgtctatt gtataataat taatttcctt tttgtatttc aataaagtat
     9421 ataaaagagc agtaagatca ttttcaatta gataccgtct tactgctctt ctctatttat
     9481 acaatatttt gttttcgatg atatcatttt aaatttatat aaacacaaaa ttaaagttgt
     9541 acatacttag acaatcgaaa gtgtacatta ttaaattatc atttccagtt ctactctagc
     9601 ggaacgtaag ttggctacca tcctcgctaa gaacctttct tgacttgtga caatcgcttg
     9661 cttctttcct ctccttcggc tctcacttac tcatttagct ctactaaact cgttgcg
//
LOCUS       DALPQQ010000097         9558 bp    DNA     linear   BCT 22-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus strain K18-6-464
            SAMD00233528-rid16434743.denovo.097, whole genome shotgun sequence.
ACCESSION   DALPQQ010000097 DALPQQ010000000
VERSION     DALPQQ010000097.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMD00233528
            Sequence Read Archive: DRR236061
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 9558)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9558)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001543423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001543423.1
            Genome Coverage       :: 77x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/22/2022 17:09:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,811
            CDSs (total)                      :: 2,743
            Genes (coding)                    :: 2,689
            CDSs (with protein)               :: 2,689
            Genes (RNA)                       :: 68
            rRNAs                             :: 2, 4, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 4, 2 (16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 54
            CDSs (without protein)            :: 54
            Pseudo Genes (ambiguous residues) :: 0 of 54
            Pseudo Genes (frameshifted)       :: 27 of 54
            Pseudo Genes (incomplete)         :: 27 of 54
            Pseudo Genes (internal stop)      :: 10 of 54
            Pseudo Genes (multiple problems)  :: 10 of 54
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9558
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMD00233528-rid16434743.denovo.097"
                     /strain="K18-6-464"
                     /db_xref="taxon:1280"
                     /geo_loc_name="Japan: Niigata"
     gene            complement(112..2088)
                     /gene="sfaD"
                     /locus_tag="O7798_001964"
                     /gene_synonym="sfnaD"
     CDS             complement(112..2088)
                     /gene="sfaD"
                     /locus_tag="O7798_001964"
                     /gene_synonym="sfnaD"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500905.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-ornithine--citrate ligase SfaD"
                     /protein_id="HDC2864220.1"
                     /translation="MNLNLIFKEQTLKFNKEEQETYLFLQQHNSDWANIFKEMILQGR
                     DKVTQRLVTSMHRENLVKARTQSKKILSRDLIMLDISTTHILEIQFPQAKQTLYAPIT
                     GEHAFDRIDVEGPFYIKDDITNTITRVHHPNEILECILIEAPDLKNAASDQFQQDLIN
                     SATNMTFAISYQALSMQHDSAPLFNIIENSEDSYLRSEQAVIEGHPLHPGAKLRKGLN
                     ALQTFLYSSEFNQPIKLKIVLIHSKLSRTMSLSKDYDTTVHQLFPDLIKQLENEFTPK
                     FNFNDYHIMIVHPWQLDDVLHSDYQAEVDKELIIEAKHTLDYYAGLSFRTLVPKYPAM
                     SPHIKLSTNVHITGEIRTLSEQTTHNGPLMTRILNDILEKDVIFKSYASTIIDEVAGI
                     HFYNEQDEADYQTERSEQLGTLFRKNIYQMIPQEVTPLIPSSLVATYPFNNESPIVTL
                     IKRYQSAASLSDFESSAKSWVETYSKALLGLVIPLVTKYGIALEAHLQNAIATFRKDG
                     LLDTMYIRDFEGLRIDKAQLNEMGYSTSHFHEKSRILTDSKTSVFNKAFYSTVQNHLG
                     ELILTISKASNDSNLERHMWYIVRDVLDNIFDQLVLSTHKSNQVNENRINEIKDTMFA
                     PFIDYKCVTTMRLEDEAHHYTYIKVNNPLYRENN"
     gene            2190..3383
                     /gene="sfaA"
                     /locus_tag="O7798_001965"
     CDS             2190..3383
                     /gene="sfaA"
                     /locus_tag="O7798_001965"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500904.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="staphyloferrin A export MFS transporter"
                     /protein_id="HDC2864221.1"
                     /translation="MTKYFFSSSFLLFLGNWIGQIGLNWFVLTTYHNAVYLGIVNFCR
                     LVPILLLSVWAGAIADKYDKGRLLRITISSSFLVTAILCVLTYSFTAIPISVIIIYAT
                     LRGILSAVETPLRQAILPDLSDKISTTQAVSFHSFIINICRSIGPAIAGVILAVYHAP
                     TTFLAQAICYFIAVLLCLPLHFKVTKIPEDASRYMPLKVIIDYFKLHMEGRQIFITSL
                     LIMATGFSYTTLLPVLTNKVFPGKSEIFGIAMTMCAIGGIIATLVLPKVLKYIGMVNM
                     YYLSSFLFGIALLGVVFHNIVIMFICITLIGLFSQWARTTNRVYFQNNVKDYERGKVL
                     SIIMMDRGMIPLGSLLMSICADVFGIVRTFSIMGISTICITMVFYFINRKLKLKLEES
                     NHGIS"
     gene            3370..5127
                     /gene="sfaB"
                     /locus_tag="O7798_001966"
     CDS             3370..5127
                     /gene="sfaB"
                     /locus_tag="O7798_001966"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500903.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="staphyloferrin A synthetase SfaB"
                     /protein_id="HDC2864222.1"
                     /translation="MVYLEWAKADRNIQYRVINAIIKERIYPEQTFISQKGSLIEIQY
                     HMHVLTIEVVRKSALERYEFTGDITYLNKGETSLIITLEGLLDVLNHDFDIPISERLR
                     EELIHSRDSLVETYKQMSHRQTLISQSFKFSRLPQDINFFSWLQHVKDSDKTDDLTYS
                     ESLVPEGHPTHPLTKTKLPLTMEEVRAYAPEFEKEIPLQIMMIEKDHVVCTAMDGNDQ
                     FIIDEIIPEYYNQIRVFLKSLGLKSEDYRAILVHPWQYDHTIGKYFEAWIAKKILIPT
                     PFTILSKATLSFRTMSLIDKPYHVKLPVDAQATSAVRTVSTVTTVDGPKLSYALQNML
                     NQYPGFKVAMEPFGEYANVDKDRARQLACIIRQKPEIDGKGATVVSASLVNKNPIDQK
                     VIVDSYLEWLNQGITKESITTFIERYAQALIPPLIAFIQNYGIALEAHMQNTVVNLGP
                     HFDIQFLVRDLGGSRIDLETLQHRVSDIKITNDSLIADSIDAVIAKFQHAVIQNQMAE
                     LIHHFNQYDCVEETELFNIVQQVVAHAINPTLPHANELKDILFGPTITVKALLNMRME
                     NKVKQYLNIELDNPIKKEV"
     gene            5134..6204
                     /gene="sfaC"
                     /locus_tag="O7798_001967"
     CDS             5134..6204
                     /gene="sfaC"
                     /locus_tag="O7798_001967"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500902.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="staphyloferrin A biosynthesis protein SfaC"
                     /protein_id="HDC2864223.1"
                     /translation="MAHVNINISKIKYNAKVLQTVFQSKNMQFTPVIKCIAGDRTIVE
                     SLKALGINHVAESRLDNIISIADQDLTYTLLRTPAKKEISDMIEKVDMSIQTELSTIH
                     QINEVAEVLGKKHKILLMVDWKDGREGVLTYDVLDYIKEIIHLKNIHFVGLAFNFMCF
                     KSDAPSDDDIFMINRFVSAVEREIGYRLKIISGGNSSMLPQLLYNDLGKINELRIGET
                     LFRGVDTTTNQAIAMLYQDAITLEAEILEIKPRVNTQTHESFLQAIVDIGYLDTKVDN
                     ISPMDQHINILGASSDHLMLDLNGQGHYQVGDHISFSLNYEALSHSMYMKNLHKVYID
                     DSKIDTLLQNFDVKSPAMVNHY"
     gene            complement(6305..6430)
                     /locus_tag="O7798_001968"
     CDS             complement(6305..6430)
                     /locus_tag="O7798_001968"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500901.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDC2864224.1"
                     /translation="MYHCYIIFALIQLTPFSMTVIPVIQLILSVAILCDELLHLI"
     gene            6596..7579
                     /locus_tag="O7798_001969"
     CDS             6596..7579
                     /locus_tag="O7798_001969"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500900.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HDC2864225.1"
                     /translation="MRGLKTFSILGLIVALLLVAACGNTDNSSKKESSTKDTISVKDE
                     NGTVKVPKDAKRIVVLEYSFADALAALDVKPVGIADDGKKKRIIKPVREKIGDYTSVG
                     TRKQPNLEEISKLKPDLIIADSSRHKGINKELNKIAPTLSLKSFDGDYKQNINSFKTI
                     AKALNKEKEGEKRLAEHDKLINKYKDEIKFDRNQKVLPAVVAKAGLLAHPNYSYVGQF
                     LNELGFKNALSDDVTKGLSKYLKGPYLQLDTEHLADLNPERMIIMTDHAKKDSAEFKK
                     LQEDATWKKLNAVKNNRVDIVDRDVWARSRGLISSEEMAKELVELSKKEQK"
     gene            7591..8622
                     /locus_tag="O7798_001970"
     CDS             7591..8622
                     /locus_tag="O7798_001970"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500899.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron ABC transporter permease"
                     /protein_id="HDC2864226.1"
                     /translation="MAIKEISSQSAIDHKRKRRTTLTYIVSLCFLFICIYLNMAIGSS
                     KINFSDIIHYVTGHTDTKATFLLHNVRMPRMIAGLFIGGALAVSGLLMQAMTRNPLAS
                     PKIFGVSSGASFFIVFVTIIIPALEYYALYLGVIGAFIGGLTVYTLSGATKGMTPIKL
                     ALAGMAIHLFFSSMTEGIIILNENSNEQVMFWLVGSLSSMKWDEILTILPWIIGALIV
                     TIFIGRQLTIMELGDDIAKGLGQNINKVRIIIGLLVIILTGMSVSVAGPIGFVGLIVP
                     HIVKRYVSKNYLVMIPLTFIIGADLLLLSDVLSRLITYPYESPVGIVTSFVGALYFLF
                     ITIKGVKRI"
     gene            8619..>9558
                     /locus_tag="O7798_001971"
     CDS             8619..>9558
                     /locus_tag="O7798_001971"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500898.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron chelate uptake ABC transporter family
                     permease subunit"
                     /protein_id="HDC2864227.1"
                     /translation="MMTTKIIRRYSLLTILLIVSIFISLCVGSVMIHPIDAIKGIFTQ
                     DDFILNEYRIPRTLLGIIIGSSLAISGAIIQAVIRNPLASPDVIGISKGASLAAVIII
                     MTFPTAPLFVLPIGSFLGAFAVSLFLSFLISKYDVKGSKLALIGLAIGAICTAIVQFL
                     LIRNPLEANKALVWLTGSLYGHDMSNIYTILPWFLITIPIIILLSYQLDVLNLGDAVA
                     TALGLKVKTIKMLLLILAVILAGSAISVVGGISFLGLIAPHIARQLIGNKTLHVIIMS
                     GLIGAILLTFGDGLARGIHPPLDIPVGVIIAIIGAPY"
BASE COUNT         3219 a         1341 c         1729 g         3269 t
ORIGIN      
        1 gtgattttta ataatttgaa tatggaaaat gtattattct ctcatttgta tagattgtat
       61 ttaataagtt aatgtaatcc ttgagctcac gattaataaa attctataac cttaattatt
      121 ttctcgatac aaagggttat taactttaat ataagtataa tgatgtgcct catcttcaag
      181 acgcattgtt gtaacacact tataatctat aaatggcgcg aacatggtat ctttaatttc
      241 atttatgcga ttctcattta cttgattaga tttgtgtgtc gaaagtacaa gttgatcaaa
      301 aatgttatct agtacatcac gaacgatata ccacatatgt ctttctaagt ttgaatcatt
      361 tgatgcttta gagattgtaa gaattaattc gcctaaatgg ttttgaacgg tagaataaaa
      421 ggctttgtta aacacagacg tttttgaatc agtaagaatt cttgattttt catggaaatg
      481 agatgtactg tatcccattt catttagttg tgctttatca attcttaaac cttcaaagtc
      541 tctaatatac atcgtgtcca atagaccatc tttccgaaat gttgcaatag cattttgcaa
      601 gtgagcctct aatgcaatgc catatttagt aactagtggg attacgagac caagcaatgc
      661 tttactataa gtttcaaccc acgatttcgc cgatgattca aaatcagaca atgatgcagc
      721 tgattgataa cgtttaatca atgtcacgat aggtgattca ttgttaaatg ggtaggttgc
      781 aactaagctt gaaggaatca atggtgtgac ttcttgtgga atcatttggt atatattttt
      841 tctaaataat gtacctaatt gttcacttcg ttcagtttga tagtctgctt cgtcttgctc
      901 attataaaaa tgaataccag caacttcatc aataattgtt gatgcatagg acttaaatat
      961 gacatctttc tccaaaatat catttaaaat acgtgtcatt agtggaccat tgtgcgtcgt
     1021 ttgttctgat aatgtacgaa tctcacctgt aatatgaacg tttgtcgaca atttgatgtg
     1081 tggcgacata gctgggtatt taggaactaa tgttctgaaa gataaaccag cataataatc
     1141 caacgtatgt tttgcttcaa tgattaattc tttatctact tctgcttgat aatcagaatg
     1201 taatacgtca tctaattgcc atggatgaac aatcataatg tgataatcat taaagttaaa
     1261 ctttggcgta aattcatttt ctaattgttt aattaagtcc ggaaatagtt gatgaacagt
     1321 tgtatcataa tctttagaca gtgacatagt acggcttaat ttactgtgaa tcagtactat
     1381 tttcaactta ataggttgat tgaattctga agaatatagg aatgtttgta atgcatttaa
     1441 acctttacgt aatttagccc caggatgtag cggatgacct tcaataacgg cttgctctga
     1501 acgcaagtaa ctatcttcgc tattttcgat aatattaaat aaaggtgcag aatcatgttg
     1561 cattgacagt gcttgatagc taattgcaaa tgtcatatta gttgcactgt ttattaaatc
     1621 ttgctgaaat tgatcactag cagcattttt taaatctggt gcttcaatta aaatacactc
     1681 aagaatttca tttggatggt gtactcgtgt aatcgtattt gtaatgtcat ctttaatgta
     1741 gaaagggcct tcaacatcaa ttcgatcaaa ggcgtgttct ccagtgatag gagcatataa
     1801 tgtttgctta gcttgtggga actggatttc tagtatatga gtcgttgaga tatctaacat
     1861 aatcaaatca cgactcaata ttttcttact ttgagtgcgc gctttaacta agttttcgcg
     1921 atgcattgat gtgaccaatc tctgagtgac tttatctctt ccttgtaaaa tcatctcttt
     1981 aaaaatatta gcccaatcgc tattatgttg ttgtaaaaat aaatatgttt cttgttcttc
     2041 tttgttaaat tttaatgtct gttctttaaa aattaagttc aagttcataa ttcacctcta
     2101 tgaaatattt tacaaaagca agatagattt gtataatcca tattaatgat aatgattctt
     2161 attatcaaca gaatgcgggt gtaagtttta tgacaaaata tttttttagc agttcttttc
     2221 tactatttct aggtaattgg attggacaaa tagggctaaa ttggtttgta cttaccactt
     2281 atcataacgc agtttatctg gggattgtca atttttgcag acttgtacca atattattac
     2341 taagtgtgtg ggcaggggca attgccgata aatatgataa agggcgattg ctgagaatta
     2401 caatttcatc atcattttta gtaactgcaa ttttatgtgt gctcacgtat agtttcactg
     2461 caattccaat tagcgtcatt attatatatg cgacattaag agggatttta agtgcggttg
     2521 aaacaccttt aagacaagca atcttaccag atttatcaga taaaatatct actacacaag
     2581 ctgtatcatt tcattcattc atcattaata tttgtcgttc aatagggcct gccattgctg
     2641 gtgtcatatt agcagtctat catgcgccaa caacatttct tgcacaggca atttgttatt
     2701 ttatcgcagt tttattatgc ttaccattac attttaaagt aactaaaata cctgaagatg
     2761 catcaagata catgccgtta aaagttatta tagattactt caaattacat atggaaggtc
     2821 gacaaatatt tataacatca ttattgatta tggcgacagg tttttcatat acgacacttt
     2881 taccagtttt gacaaacaaa gtatttccgg ggaaatctga aatatttggt atcgctatga
     2941 cgatgtgtgc cattggtggt attattgcaa cgctagtttt acctaaagta cttaaatata
     3001 ttggtatggt aaatatgtat tatttaagtt catttttatt tggcattgct ttgttaggtg
     3061 tggtatttca caatattgtc atcatgttca tttgtattac attgattggg ttatttagtc
     3121 aatgggcacg tacgacaaat cgcgtttatt ttcaaaataa tgttaaagat tatgaacgtg
     3181 gtaaagtact gagtattatt atgatggata gaggtatgat tccattggga agtctattaa
     3241 tgagtatatg tgcagatgtg tttggcattg ttagaacttt ttcaataatg ggaataagta
     3301 ctatatgcat tacaatggta ttctatttta taaatagaaa gttgaagtta aagttggagg
     3361 aaagtaatca tggtatatct tgaatgggca aaggcagata gaaatattca atatcgtgta
     3421 attaacgcca ttattaaaga acgtatttac cccgagcaaa catttatttc gcaaaaagga
     3481 tctttaattg aaattcagta tcatatgcat gtgttgacta ttgaagttgt tagaaaaagt
     3541 gcattagaac gctatgagtt tacaggtgat attacttatt taaataaagg tgaaacgtca
     3601 ttaattataa ctttagaagg tttattagat gtgttgaatc atgactttga tatccctatt
     3661 tcagagcgac tacgcgaaga gttaatacac agtcgagata gtttagttga aacatataag
     3721 caaatgtctc acagacaaac gttaataagt caaagtttta aattttcaag gttaccacaa
     3781 gatattaact ttttttcatg gttacaacat gtaaaagata gtgataagac agatgattta
     3841 acttattctg agagtttggt accagagggg catccaacac accctttaac caaaacgaaa
     3901 ttgcccttaa ctatggaaga agtacgagca tatgcacctg agtttgaaaa agaaatccct
     3961 ttgcaaatta tgatgattga aaaagaccat gttgtgtgca cagctatgga tggtaatgat
     4021 caatttatta ttgatgaaat aattcccgaa tactacaatc agattcgtgt gtttttaaag
     4081 agtttaggtt tgaaaagtga agactataga gcgattttag tacatccttg gcaatatgat
     4141 catacgatag ggaaatattt tgaagcatgg attgctaaaa aaatattaat tccaacgccg
     4201 tttacaatac tttcaaaagc aactttatca tttaggacga tgtctttaat tgataaacca
     4261 taccatgtta agttgcccgt cgatgcacaa gcaacaagtg ccgttagaac agtctcaact
     4321 gtgactactg tagatggacc aaagttaagt tatgctttac aaaacatgtt gaatcaatat
     4381 ccaggattta aagttgctat ggaaccgttc ggtgaatatg caaatgttga taaagatagg
     4441 gcacgtcagc ttgcttgtat tataagacaa aagcctgaaa ttgatggaaa aggtgcaaca
     4501 gtagttagtg caagtctagt taataaaaat ccaatagatc aaaaagttat cgtggatagt
     4561 tacttagagt ggttaaatca aggaattact aaagaaagta ttacgacatt tattgaacga
     4621 tacgctcaag cattaatccc gcctttaatt gcttttattc aaaattatgg aattgcttta
     4681 gaagcacaca tgcaaaatac agtagtgaac ttggggccac attttgacat tcaattttta
     4741 gtgagagatt taggtggttc tagaattgat ttagaaacat tacaacatcg tgtatcagat
     4801 attaaaatta caaatgatag tttaatagct gattctatag atgcagtgat tgcaaaattc
     4861 caacatgctg ttattcaaaa tcaaatggca gaattaatcc atcattttaa tcagtatgat
     4921 tgtgttgaag aaaccgaatt atttaacata gtacagcaag tagtagcgca tgccattaac
     4981 ccaacactac cacatgcaaa tgagttaaaa gatattttgt ttggaccaac aattactgtc
     5041 aaagcgttgt taaatatgag aatggaaaat aaagtaaagc aatatttaaa tattgagtta
     5101 gataatccga taaaaaaaga ggtgtagtac tacatggcac acgttaacat aaatatatcg
     5161 aagattaaat ataacgccaa agtacttcaa acagtttttc aaagtaaaaa tatgcaattc
     5221 acaccagtaa ttaagtgcat agctggtgac cgtacaattg tagaaagctt aaaagcgtta
     5281 ggtatcaatc atgttgcaga atccagattg gataacataa ttagtattgc agatcaggat
     5341 ttaacatata cgttattgcg tacgcctgcc aaaaaagaga tttcagatat gatagaaaaa
     5401 gttgatatga gtatccaaac agaattatct accatacatc aaataaatga agtagcagaa
     5461 gttttaggaa aaaaacataa gattttatta atggtagatt ggaaagatgg ccgtgaaggt
     5521 gttctgactt atgatgtttt agattatatt aaagagatta ttcacttgaa aaatatccat
     5581 tttgtaggtt tagcattcaa ttttatgtgt tttaaatctg atgcgccaag tgatgatgat
     5641 atctttatga ttaatcgatt cgtctcagct gttgaaagag aaataggata tcgattgaaa
     5701 attatttcag gtggtaattc gagcatgtta ccacaacttt tatataatga tttgggtaaa
     5761 ataaatgaat tgcgaatagg tgaaacgttg tttagaggtg ttgatacaac gacaaatcaa
     5821 gcgatcgcta tgttatatca agatgcgatt acattggagg ctgagatttt agaaattaaa
     5881 cctcgagtta atacacaaac gcatgaatca ttcttacaag ctattgtaga tattggttat
     5941 ttagatacaa aagtcgataa tatttcacct atggatcagc atatcaatat tttaggcgct
     6001 tcgagtgatc atttaatgct tgatttaaat ggtcaaggac actatcaagt tggagatcat
     6061 atatcttttt cattaaatta tgaagcactt tctcattcga tgtatatgaa aaatttacat
     6121 aaggtatata ttgatgattc aaagattgat acgctacttc aaaattttga tgtgaaatct
     6181 cctgctatgg taaaccacta ttaatatatt tatcaataag tctaagttga caagttatac
     6241 tacatatcgt ttgcacggtt gtatcataat tgttcaactt agattttttg tatttgttga
     6301 tttatcaaat taagtgcaac agttcgtcac ataaaattgc aacagataat atcagctgaa
     6361 ttacagggat aacggtcatg ctaaatggtg tcaattgtat taatgcaaag atgatatagc
     6421 aatgatacat tatcagtatt ttgtctaagg aaatgtgcta attgtagtca taattattag
     6481 aggaaatata tagtcataca ttttataaat ataaaaaaga ttgaacgcta cttgacaatg
     6541 ataattgtta tcaataaaat aataaatgaa gttatacata ttaaggagtg gaacgatgag
     6601 aggtctaaaa acttttagta tattgggatt aatagttgcc ttacttttag ttgcagcttg
     6661 tggtaatacg gataattcaa gtaaaaaaga atcatcaact aaagatacta tttcggtaaa
     6721 agatgaaaat ggtacagtaa aagtacctaa agatgcaaaa cgtatcgttg tattagagta
     6781 ctcatttgca gatgcattag cagcattaga cgttaaacca gttggtattg ctgatgatgg
     6841 taagaaaaaa cgtatcatta aaccagttag agaaaaaatt ggggattata cttctgtagg
     6901 tacacgtaaa cagccaaact tagaagaaat tagtaaatta aaaccggatt taattatcgc
     6961 tgatagcagt agacataaag gtattaataa agaattaaac aaaattgcac caacattatc
     7021 attaaagagt tttgatggag actacaaaca aaatattaat tcgttcaaaa caattgctaa
     7081 agctttaaat aaagaaaaag aaggcgaaaa acgtcttgct gagcatgata aattaatcaa
     7141 taagtataaa gatgaaatta aatttgatag aaatcaaaaa gtgcttccag cagtagttgc
     7201 taaagctggt ttattagcac atccaaacta ttcatatgtt ggacaatttt taaacgaact
     7261 aggatttaaa aatgcattaa gtgacgatgt aacaaaaggt ttaagtaaat atttgaaagg
     7321 accttactta caattagaca ctgaacattt agctgattta aatccagagc gtatgatcat
     7381 tatgacagat catgctaaaa aagattctgc tgaattcaag aagttacaag aagatgcaac
     7441 atggaaaaag ttgaatgcag ttaaaaataa tcgcgtggat attgttgacc gtgatgtttg
     7501 ggcaagatct cgtggcttaa tttcttctga agaaatggct aaagaacttg ttgaattatc
     7561 aaaaaaagaa caaaagtaag gtggaagtaa atggctataa aagaaataag tagccaatct
     7621 gccatagatc ataaaagaaa aagacgcaca acactcacgt atatagtgag tttgtgcttt
     7681 ctttttattt gtatatattt aaatatggcg attggttctt cgaaaattaa ttttagcgat
     7741 atcattcact atgttactgg tcatacagat acgaaagcaa cgtttttatt gcataatgta
     7801 cgtatgccaa ggatgattgc agggttattt attggcggtg cattagcggt atctggtttg
     7861 ttaatgcaag caatgacacg caatccgcta gcatcaccta aaatttttgg tgtcagttct
     7921 ggtgcatcgt ttttcattgt atttgtgacg attatcattc cagcattaga atattatgca
     7981 ttatatttag gtgtgatagg tgcatttata ggtggtttaa ctgtttatac actttcaggt
     8041 gctacgaaag gtatgacacc cattaaatta gcattggctg gtatggccat ccatttgttt
     8101 tttagtagta tgaccgaagg tattattatt ttgaatgaga attcaaacga acaagtgatg
     8161 ttttggcttg tcggttcatt atccagtatg aagtgggatg aaattttaac cattctacca
     8221 tggattattg gtgctttaat tgtaacgatt tttattggac gtcaactaac gataatggaa
     8281 ctaggcgatg acattgctaa gggattgggt caaaatataa ataaagttag aattatcatt
     8341 ggactattag tcattattct tacaggtatg tcggtgtcag tggcaggacc aattggattt
     8401 gttggcttaa tcgtaccgca tatagtcaaa cgctatgtga gtaagaatta tttagtcatg
     8461 attccattaa catttattat aggtgcagat ttgttactac tatcagatgt attaagtcgt
     8521 ttaattacat atccttatga atcaccagta gggattgtta catcattcgt aggtgcactt
     8581 tacttcttat ttataacgat taaaggggtg aaaagaatat gatgacaacg aaaattatac
     8641 gtcgttatag tttactcaca atccttttaa ttgtgagtat attcataagt ttatgtgtag
     8701 ggtctgtcat gattcatccg attgatgcta ttaagggaat ctttacacaa gatgatttta
     8761 ttttaaatga gtatcgtata cctagaacat tacttggtat tattatcggt agtagcttgg
     8821 ctatttcagg tgcaattata caagctgtaa taagaaaccc gttagcctca cctgatgtta
     8881 taggtatttc taaaggtgcc agtttagctg ctgtgattat tattatgacc tttccaacag
     8941 caccattgtt tgtattacct ataggttcat tcttaggtgc ctttgcagta agtttatttt
     9001 tatcattttt aatttcaaaa tatgatgtta aaggttcaaa gcttgcctta attggtttag
     9061 caataggcgc aatatgtacg gcgattgtgc agttcttatt aatcagaaat ccactggaag
     9121 caaacaaagc gcttgtttgg ttgacaggta gtctatatgg acatgatatg tcgaatattt
     9181 atactatatt accttggttt ttaataacga taccaatcat cattttattg agttatcaat
     9241 tagatgtatt gaatctaggt gatgctgttg caaccgcact cggtttaaaa gttaaaacta
     9301 ttaaaatgct attgttaatt ttagcagtaa tattagcagg atccgcaatt tcagttgtcg
     9361 gtggtattag ctttttagga ttaattgcac ctcatattgc gagacaatta ataggaaata
     9421 aaacattaca cgttattatc atgtcggggt taattggtgc tatattgtta acatttggag
     9481 atggtttagc ccgtggcatt catccgccac tggatattcc tgttggggtt atcattgcaa
     9541 ttatcggtgc accatact
//
LOCUS       DALPQQ010000098         9190 bp    DNA     linear   BCT 22-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus strain K18-6-464
            SAMD00233528-rid16434743.denovo.098, whole genome shotgun sequence.
ACCESSION   DALPQQ010000098 DALPQQ010000000
VERSION     DALPQQ010000098.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMD00233528
            Sequence Read Archive: DRR236061
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 9190)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9190)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001543423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001543423.1
            Genome Coverage       :: 77x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/22/2022 17:09:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,811
            CDSs (total)                      :: 2,743
            Genes (coding)                    :: 2,689
            CDSs (with protein)               :: 2,689
            Genes (RNA)                       :: 68
            rRNAs                             :: 2, 4, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 4, 2 (16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 54
            CDSs (without protein)            :: 54
            Pseudo Genes (ambiguous residues) :: 0 of 54
            Pseudo Genes (frameshifted)       :: 27 of 54
            Pseudo Genes (incomplete)         :: 27 of 54
            Pseudo Genes (internal stop)      :: 10 of 54
            Pseudo Genes (multiple problems)  :: 10 of 54
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9190
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMD00233528-rid16434743.denovo.098"
                     /strain="K18-6-464"
                     /db_xref="taxon:1280"
                     /geo_loc_name="Japan: Niigata"
     gene            14..1090
                     /locus_tag="O7798_001972"
     CDS             14..1090
                     /locus_tag="O7798_001972"
                     /EC_number="2.6.1.42"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499108.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid aminotransferase"
                     /protein_id="HDC2864228.1"
                     /translation="MSQAVKVERRETLKQKPNTSQLGFGKYFTDYMLSYDYDADKGWH
                     DLKIVPYGPIEISPAAQGVHYGQSVFEGLKAYKRDGEVALFRPEENFKRLNNSLARLE
                     MPQVDEAELLEGLKQLVDIERDWIPEGEGQSLYIRPFVFATEGALGVGASHQYKLLII
                     LSPSGAYYGGETLKPTKIYVEDEYVRAVRGGVGFAKVAGNYAASLLAQTNANKLGYDQ
                     VLWLDGVEQKYIEEVGSMNIFFVENGKVITPELNGSILPGITRKSIIELAKNLGYEVE
                     ERRVSIDELFESYDKGELTEVFGSGTAAVISPVGTLRYEDREIVINNNETGEITQKLY
                     DVYTGIQNGTLEDKNGWRVVVPKY"
     gene            1340..2023
                     /locus_tag="O7798_001973"
     CDS             1340..2023
                     /locus_tag="O7798_001973"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499110.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAD family hydrolase"
                     /protein_id="HDC2864229.1"
                     /translation="MEWILFDKDGTLIEFDRSWEKIGVRFVQSLLETFPVHNKEAALR
                     QLGVIKESIDPKSVMGSGSLQQIIQAFNDVTGQDTTDWSKSTSQKLVDERIPEINWVE
                     GVKEALIDLKAKGYQLGIVTSDTKKGVEQFLAHTNATSLFDLIISTEADAYEKPNPKV
                     LSPLFEQYNVDPQKVAIVGDTANDMKTASNANLGMAIGVLTGIATKEELHEADIILNS
                     AADILEALN"
     gene            complement(2139..2801)
                     /locus_tag="O7798_001974"
     CDS             complement(2139..2801)
                     /locus_tag="O7798_001974"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499111.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="deoxynucleoside kinase"
                     /protein_id="HDC2864230.1"
                     /translation="MNNYGIPQNAIITIAGTVGVGKSTLTQALADKLNFKTSFENVEH
                     NPYLDKFYSDFERWSFHLQIYFLAERFKEQKRMFEYGGGFVQDRSIYEDVDIFAKMHE
                     EEGTMSKEDFKTYSDLFNAMVMTPYFPKPDVMIYLECNYDEVIDRIIERGREMEINTD
                     PEYWKKLFKRYDDWINSFNACPVVRININEYDIHKDPESLNPMINKIARIIQTYRQVD
                     TR"
     gene            complement(2794..3411)
                     /locus_tag="O7798_001975"
     CDS             complement(2794..3411)
                     /locus_tag="O7798_001975"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499112.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="deoxynucleoside kinase"
                     /protein_id="HDC2864231.1"
                     /translation="MNKPFIAIEGPIGVGKSSLAHKLSQTLDFYEEKEIITENPFLSD
                     FYEDISKWSFQTEMFFLCNRYKQFQDVTQLNQGVVSDYHIHKNKIFAKNTLSSVEFQK
                     FSKIYDILTEDMIMPNMIIFLDADLDVLKSRIAKRNRSFEHQIEDEYLLKLKKDYREY
                     YESLQSNGSNVVLIDTTSIDFLKNEQDYEDILHIILPMIGDITNE"
     gene            3478..3948
                     /locus_tag="O7798_001976"
     CDS             3478..3948
                     /locus_tag="O7798_001976"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499113.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleoside deaminase"
                     /protein_id="HDC2864232.1"
                     /translation="MTNDIYFMTLAIEEAKKAAQLGEVPIGAIITKDDEVIARAHNLR
                     ETLQQPTAHAEHIAIERAAKVLGSWRLEGCTLYVTLEPCVMCAGTIVMSRIPRVVYGA
                     DDPKGGCSGSLMNLLQQSNFNHRAIVDKGVLKEACSTLLTTFFKNLRANKKSTN"
     gene            4095..4964
                     /locus_tag="O7798_001977"
     CDS             4095..4964
                     /locus_tag="O7798_001977"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499114.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAD family phosphatase"
                     /protein_id="HDC2864233.1"
                     /translation="MIKLIATDMDGTLLNGAHEISQPNIDAIKYAQEQGITVVIATGR
                     AFYEAQAPVADTDLTVPYICLNGAKVRDETFNVMSTSHLNKSLVHKITNVLKDAGIYY
                     QVYTSRAIYTEDPQRDLDIYIDIAERAGQHANVERIKNGIQRRIDNGTLKVVDNYDAI
                     ENIPGELIMKILAFDGNLEKIDKASKILAESPNLAISSSSRGNIEITHSDAQKGIALE
                     TIAERLGIEMKEVMSIGDNLNDLSMLEKVGYPVAMENGAEEVKKIAKYVTDTNENSGV
                     GKAIMKLLREQQV"
     gene            4985..5551
                     /locus_tag="O7798_001978"
     CDS             4985..5551
                     /locus_tag="O7798_001978"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499115.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H-dependent oxidoreductase"
                     /protein_id="HDC2864234.1"
                     /translation="MKGLIIIGSAQVNSHTSALARYLTEHFKTHDIEAEIFDLAEKPL
                     NQLDFSGTTPSIDEIKQNMKDLKEKAMAADFLILGTPNYHGSYSGILKNALDHLNMDY
                     FKMKPVGLIGNSGGIVSSEPLSHLRVIVRSLLGIAVPTQIATHDSDFAKNEDGSYYLN
                     DSEFQLRARLFVDQIVSFVNNSPYEHLK"
     gene            5982..8933
                     /gene="sdrC"
                     /locus_tag="O7798_001979"
     CDS             5982..8933
                     /gene="sdrC"
                     /locus_tag="O7798_001979"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499117.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MSCRAMM family adhesin SdrC"
                     /protein_id="HDC2864235.1"
                     /translation="MNNKKTATNRKGMIPNRLNKFSIRKYSVGTASILVGTTLIFGLS
                     GHEAKAAEHTNGELNQSKNETTAPSENKTTKKVDSRQLKDNTQTATADQPKVTMSDSA
                     TVKETSSNMQSPQNATANQSTTKTSNVTTNDKSSTTYSNETDKSNLTQAKDVSTTPKT
                     TTIKPRTLNRMAVNTVAAPQQGTNVNDKVHFSNIDIAIDKGHVNQTTGKTEFWATSSD
                     VLKLKANYTIDDSVKEGDTFTFKYGQYFRPGSVRLPSQTQNLYNAQGNIIAKGIYDST
                     TNTTTYTFTNYVDQYTNVRGSFEQVAFAKRKNATTDKTAYKMEVTLGNDTYSEEIIVD
                     YGNKKAQPLISSTNYINNEDLSRNMTAYVNQPKNTYTKQTFVTNLTGYKFNPNAKNFK
                     IYEVTDQNQFVDSFTPDTSKLKDVTDQFDVIYSNDNKTATVDLMKGQTSSNKQYIIQQ
                     VAYPDNSSTDNGKIDYTLDTDKTKYSWSNSYSNVNGSSTANGDQKKYNLGDYVWEDTN
                     KDGKQDANEKGIKGVYVILKDSNGKELDRTTTDENGKYQFTGLSNGTYSVEFSTPAGY
                     TPTTANVGTDDAVDSDGLTTTGVIKDADNMTLDSGFYKTPKYSLGDYVWYDSNKDGKQ
                     DSTEKGIKGVKVTLQNEKGEVIGTTETDENGKYRFDNLDSGKYKVIFEKPAGLTQTGT
                     NTTEDDKDVDGGEVDVTITDHDDFTLDNGYYEEETSDSDSDSDSDSDSDSDSDSDSDS
                     DSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDS
                     DSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDNDSDSDSDSDS
                     DSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDNDS
                     DSDSDSDSDAGKHTPAKPMSTVKDQHKTAKALPETGSENNNSNNGTLFGGLFAALGSL
                     LLFGRRKKQNK"
BASE COUNT         3479 a         1335 c         1635 g         2741 t
ORIGIN      
        1 ggaggcaatc accatgtcac aagcagttaa agttgaacga cgagaaacat taaaacaaaa
       61 accaaataca tctcaactag gttttggtaa atattttact gattatatgt tgagttatga
      121 ttatgatgca gataaaggat ggcatgattt gaagatagta ccttatggtc ctattgaaat
      181 ttcacctgct gcacaaggtg ttcattatgg tcaatcggta ttcgaaggat taaaagcata
      241 taaaagagat ggggaagttg cacttttccg tcctgaagaa aattttaagc gtcttaataa
      301 ctcgttagca cgattagaaa tgcctcaagt agacgaagca gaattgttag aggggctaaa
      361 acaattagtt gatattgaaa gagattggat tcctgaaggg gaaggtcaat cattatatat
      421 tcgtccattt gtttttgcaa cagaaggggc acttggcgtt ggtgcatcac atcagtataa
      481 attattaatt attttatctc cttcaggtgc atattatggt ggtgaaactt taaaaccaac
      541 taaaatctat gtagaagatg aatatgtgcg tgctgttcgt ggcggtgtag gctttgcaaa
      601 agttgcaggt aactatgcgg caagtttatt agcacaaact aatgcaaata aattaggtta
      661 tgaccaagta ttatggcttg atggtgttga acagaaatat atcgaagaag ttggtagcat
      721 gaacattttc ttcgttgaaa atggcaaagt aattacacca gagttgaatg gcagtatttt
      781 acctggtatt acacgtaaat ctattatcga attagctaaa aacttaggat atgaagtcga
      841 agagcgccgc gtttcaatcg atgaattatt cgaatcatat gataaaggtg agttaacaga
      901 agtatttggt agtggtactg cagcagttat ttcacctgtg ggtacattga gatacgaaga
      961 tcgtgaaatc gttattaata ataatgagac tggtgaaatt actcaaaaat tatacgacgt
     1021 ctatactggt attcaaaatg gtactttaga agataaaaat ggttggagag tcgttgtacc
     1081 aaaatattaa taaaaattga atataatcat gaaaacaata tgcaaaagtt aatcatgact
     1141 aaaatccctt tcaatgaagc gaagcatggt aataaattaa gtttacaatg tttattgtta
     1201 agtattgaag gggatttcac ttattattat atttaattca atatttaaat agaacaatac
     1261 tacgagttca ttttcagggg ataacgaata tcatagaatc agcataatac gaaataaata
     1321 aataggagta ttgatatcaa tggaatggat attatttgat aaagatggta cgttaattga
     1381 atttgataga agttgggaaa aaataggggt acgatttgta caatcattgc ttgagacttt
     1441 cccagtacat aataaagaag ctgctttaag acaactcggt gtcattaaag aatctattga
     1501 tccaaaatca gtgatgggtt caggatcttt acaacaaatt atccaggcat ttaatgatgt
     1561 gacgggacaa gatacaaccg actggtccaa gtcaacaagt caaaagctgg tagatgaacg
     1621 tattcctgaa attaattggg tagaaggtgt taaagaagca cttatcgatt tgaaagcaaa
     1681 aggctatcaa cttggtattg ttacgagtga tactaaaaaa ggtgtagaac aatttttagc
     1741 acataccaat gctacctcgt tgttcgattt gatcatttct accgaagcgg atgcctatga
     1801 gaagccaaat cctaaagtat tatcgccttt atttgagcaa tataatgtag atcctcagaa
     1861 agtagctata gtaggagaca ctgctaatga tatgaagaca gcaagtaatg caaatttagg
     1921 tatggcaata ggtgtattaa caggtattgc aacaaaagaa gaattacatg aagctgatat
     1981 tattttaaat agtgcggcag atattttaga agctttaaat taaaaagaaa gacatagtgt
     2041 atatgtgaat taatgtattc gatagaattg ataaaataat cgataatatc tatggaatat
     2101 acattgaata taaacatata cgctatgtct ttagtctttt atcgtgtatc tacttgtcga
     2161 tatgtttgaa taattcgagc aattttgttt atcataggat ttaaagattc ggggtcctta
     2221 tggatatcat attcattaat attgatacgt acaactggac atgcattaaa gctattaatc
     2281 caatcgtcat agcgtttaaa tagctttttc cagtattcag ggtctgtatt aatttccatt
     2341 tcgcgaccac gttcaataat acgatcaatg acctcatcat agttacattc taaataaatc
     2401 attacatcag gtttaggaaa ataaggtgtc atgaccatgg cattaaataa gtctgaatat
     2461 gttttgaaat cttctttact cattgtgcct tcttcttcat gcatttttgc aaaaatatca
     2521 acatcttcat aaattgatcg atcttggaca aagccaccac catattcaaa catacgcttt
     2581 tgttctttaa aacgttcagc taagaagtaa atttgcaaat ggaaactcca tcgttcaaaa
     2641 tcgctgtaaa atttatctaa atatggatta tgttcgacat tttcaaaaga cgttttaaag
     2701 tttaatttat ctgcaagtgc ttgcgttagt gttgattttc caacaccaac tgtacctgca
     2761 atggttataa tggcattttg tggaataccg taattattca ttggtaatat ctcctatcat
     2821 aggtaatata atatgtaata tatcttcgta atcttgttca tttttaagaa aatcaataga
     2881 agttgtatcg attaaaacta catttgaacc attactttgt aaggactcat aatactcacg
     2941 ataatctttt tttaacttta acagatattc atcttctatt tgatgctcaa aactacggtt
     3001 acgtttagca attctagatt ttaacacatc aaggtctgca tctaaaaaga taatcatatt
     3061 cggcataatc atatcttcag ttaaaatatc ataaatttta ctgaatttct gaaattcaac
     3121 agaactcaaa gtatttttag caaatatctt atttttatgt atatgataat cactaactac
     3181 accttgattt agttgtgtta catcttgaaa ttgcttatat ctattgcata aaaagaacat
     3241 ttcagtttga aaactccatt tagagatatc ttcataaaag tctgataaaa atggattttc
     3301 tgtgatgatt tctttttctt cataaaaatc taaagtttga cttaatttgt gtgcaagtga
     3361 agatttacct acgccaatag gaccttcaat tgctataaaa ggtttgttca tattcacatc
     3421 tccaaatgtt aaaatagaca ttgagtattg taccataagt gaggtatctg gacataaatg
     3481 acaaatgata tatattttat gacattagcg attgaagaag ctaaaaaagc agctcaacta
     3541 ggcgaagtac ctataggtgc tatcatcact aaagatgatg aagttatcgc tagagcacat
     3601 aatttaagag aaacactaca acaaccaacg gcgcatgctg aacatattgc aattgaacgt
     3661 gcagccaaag tgttaggtag ttggcgttta gaaggttgca cattatatgt aaccttagaa
     3721 ccatgtgtca tgtgcgcagg aacaattgta atgagtcgca ttccaagagt cgtctatggc
     3781 gcagatgatc ctaaaggtgg ttgtagtggc agtttaatga atttattgca acaatctaat
     3841 tttaatcatc gtgcaattgt tgataaaggt gtacttaaag aagcatgtag cacattatta
     3901 acaacatttt ttaaaaactt aagagccaat aagaaatcca ccaattagac gatagtacat
     3961 actaattaaa atttgttaga attacattat atgataaatt aatgacaata taaatgttaa
     4021 tagaaaagta tgtgcgctga gtatatattc ttatttaaga acaagatttt aaatttacga
     4081 aacgaggtaa cataatgata aaactaatag ccactgatat ggatggcacg ctacttaatg
     4141 gagcacatga aatttctcaa cctaatattg atgcgattaa atacgctcaa gaacaaggga
     4201 taacggttgt tatcgcgaca ggtcgagcat tttatgaagc acaagcacca gttgctgaca
     4261 cagatttaac agtaccatat atttgtttga atggtgctaa agtacgtgat gaaactttca
     4321 atgtaatgag cacttcacac cttaataaat cgttagtaca caaaattaca aatgttttaa
     4381 aagatgcagg tatttattat caagtataca cgagtcgtgc gatttatact gaagatccac
     4441 aaagagattt agacatttac atagatattg ctgagcgtgc aggtcaacat gcaaacgttg
     4501 agcgtattaa aaatggtatt caaagacgca tagataatgg tacgttgaaa gttgttgata
     4561 attatgatgc tattgaaaac atacctggtg aattaattat gaaaatatta gcatttgatg
     4621 gaaatttaga aaaaattgac aaagctagta aaattttagc tgaatctccg aatttagcta
     4681 tatcatcatc ttcgagagga aatatagaaa taacgcattc agatgcacaa aaaggtattg
     4741 cgctagaaac aattgccgaa agattaggga ttgaaatgaa agaagtcatg tcaataggtg
     4801 acaatttaaa tgacttatca atgttagaga aagttggcta tccagttgcg atggaaaatg
     4861 gtgcagaaga agttaaaaaa atagcgaaat atgtcacaga tacgaatgaa aatagtggtg
     4921 ttggaaaagc tattatgaaa ttattacgtg aacaacaagt ttaataaaaa aagaggggtc
     4981 aaatatgaaa ggattaatta ttattggcag tgcacaagtg aattcacata caagtgcact
     5041 agcaagatac ttaactgagc attttaaaac acatgatatt gaagcggaaa tattcgattt
     5101 agcagaaaaa ccgttaaatc aattagattt ttcaggaaca acaccgtcta ttgatgaaat
     5161 caaacaaaat atgaaagatt taaaagagaa agcaatggcg gcggactttt taatattagg
     5221 aacgccaaac tatcatggtt catattctgg aatattgaaa aatgcattag atcatctaaa
     5281 tatggattat tttaaaatga aacctgtagg cttaatagga aatagtggtg gtattgttag
     5341 ttcagagcca ttgtcacatt taagagtaat cgtcagaagt ttactaggca ttgctgtacc
     5401 aactcaaata gcaacacatg attctgattt tgctaaaaat gaagatggtt catattactt
     5461 aaatgatagt gaattccaat tacgagcaag attatttgtc gatcaaattg tatcttttgt
     5521 gaataatagt ccatatgaac atttaaaata atattaaaaa atatgtaaat atacattaaa
     5581 aataggtatg tagcttaagg tatttcattg agaatgcttt taagtcacat gcctattttt
     5641 tgttctaatg caccaatagt aagcctttga tattactgtt gtgagcaatg ttattaatta
     5701 aaataagatg taatagcgaa ttgaaaacaa gcttagatta aaagtgagtt ttaaaaatat
     5761 agataaataa tttaaagcaa ttaaagaaaa aaagtattaa aaattgcaat tcttaaactg
     5821 tgattcatat taatatttct agcgaataac attgtaaaat aaagaaaaat aattaaagta
     5881 ttgcacttta ttgaaattta tattacgata gtaatgcaga aatttatata tgcaaaatat
     5941 tatatttatc aaattttgat attttaaagg agtattatta aatgaataat aaaaagacag
     6001 caacaaatag aaaaggcatg ataccaaatc gattaaacaa attttcgata agaaagtatt
     6061 ctgtaggtac tgcttcaatt ttagtaggga caacattgat ttttgggtta agtggtcatg
     6121 aagctaaagc ggcagaacat acgaatggag aattaaatca atcaaaaaat gaaacgacag
     6181 ccccaagtga gaataaaaca actaaaaaag ttgatagtcg tcaactaaaa gacaatacgc
     6241 aaactgcaac tgcagatcag cctaaagtga caatgagtga tagtgcaaca gttaaagaaa
     6301 ctagtagtaa catgcaatca ccacaaaacg ctacagctaa tcaatctact acaaaaacta
     6361 gcaatgtaac aacaaatgat aaatcatcaa ctacatatag taatgaaact gataaaagta
     6421 atttaacaca agcaaaagat gtttcaacta cacctaaaac aacgactatt aaaccaagaa
     6481 ctttaaatcg catggcagtg aatactgttg cagctccaca acaaggaaca aatgttaatg
     6541 ataaagtaca tttttcaaat attgacattg cgattgataa aggacatgtt aatcagacta
     6601 ctggtaaaac tgaattttgg gcaacttcaa gtgatgtttt aaaattaaaa gcaaattaca
     6661 caatcgatga ttctgttaaa gagggcgata catttacttt taaatatggt caatatttcc
     6721 gtccaggatc agtaagatta ccttcacaaa ctcaaaattt atataatgcc caaggtaata
     6781 ttattgcaaa aggtatttat gatagtacaa caaacacaac aacatatact tttacgaact
     6841 atgtagatca atatacaaat gttagaggta gctttgaaca agttgcattt gcgaaacgta
     6901 aaaatgcaac aactgataaa acagcttata aaatggaagt aactttaggt aatgatacat
     6961 atagcgaaga aatcattgtc gattatggta ataaaaaagc acaaccgctt atttcaagta
     7021 caaactatat taacaatgaa gatttatcgc gtaatatgac tgcatatgta aatcaaccta
     7081 aaaatacata tactaaacaa acgtttgtta ctaatttaac tggatataaa tttaatccaa
     7141 atgcaaaaaa cttcaaaatt tacgaagtga cagatcaaaa tcaatttgtg gatagtttca
     7201 cccctgatac ttcaaaactt aaagatgtta ctgatcaatt cgatgttatt tatagtaatg
     7261 ataataaaac agctacagtc gatttaatga aaggccaaac aagcagcaat aaacaataca
     7321 tcattcaaca agttgcttat ccagataata gttcaacaga taatggaaaa attgattata
     7381 ctttagacac tgacaaaact aaatatagtt ggtcaaatag ttattcaaat gtgaatggct
     7441 catcaactgc taatggcgac caaaagaaat ataatctagg tgactatgta tgggaagata
     7501 caaataaaga tggtaaacaa gatgccaatg aaaaagggat taaaggtgtt tatgtcattc
     7561 ttaaagatag taacggtaaa gaattagatc gtacgacaac agatgaaaat ggtaaatatc
     7621 agttcactgg tttaagcaat ggaacttata gtgtagagtt ttcaacacca gccggttata
     7681 caccgacaac tgcaaatgta ggtacagatg atgctgtaga ttctgatgga ctaactacaa
     7741 caggtgtcat taaagacgct gacaacatga cattagatag tggattctac aaaacaccaa
     7801 aatatagttt aggtgattat gtttggtacg acagtaataa agatggtaaa caagattcga
     7861 ctgaaaaagg aattaaaggt gttaaagtta ctttgcaaaa cgaaaaaggc gaagtaattg
     7921 gtacaactga aacagatgaa aatggtaaat accgctttga taatttagat agtggtaaat
     7981 acaaagttat ctttgaaaaa cctgctggct taactcaaac aggtacaaat acaactgaag
     8041 atgataaaga tgtcgatggt ggcgaagttg atgtaacaat tacggatcat gatgatttca
     8101 cacttgataa tggctactac gaagaagaaa catcagatag cgactcagat tctgacagcg
     8161 attcagactc agatagcgac tcagattcag acagcgattc agacagcgac tcagactcag
     8221 atagcgactc agactcagac agcgattcag attcggatag cgactcagac tcagatagcg
     8281 actcagattc ggatagcgac tcagactcag atagcgattc agattcagat agcgattcgg
     8341 actcagacag tgattcagat tcagactcag atagcgactc agattctgac agcgattcag
     8401 actcagacag cgactcagac tcagacagtg attcagattc agacagcgac tcagattcag
     8461 atagcgactc agactcagat agcgactcag attcagatag cgattcggac tcagacaacg
     8521 actcagattc agatagcgat tcagattcag atagcgactc agattcggac agcgattcag
     8581 actcagatag cgattcagac tcagacagcg attcagattc agatagcgac tcagactcag
     8641 atagcgactc agactcggat agcgattcag attcagacag cgactcagat tcagatagcg
     8701 attcggactc agacaacgac tcagattcag atagcgattc agattcagat gcaggtaaac
     8761 atactccggc taaaccaatg agtacggtta aagatcagca taaaacagct aaagcattac
     8821 cagaaacagg tagtgaaaat aataattcaa ataatggcac attattcggt ggattattcg
     8881 cggcattagg atcattattg ttattcggtc gtcgtaaaaa acaaaataaa taatatgatt
     8941 aacttaacca ggtccatgtg gcctggtttt ttctgtttag aaattcccag atataaaaca
     9001 aaaaatcttt aaggaataga tacaatttaa tttgttacag aaatgtaatt gtctatgaat
     9061 tagaaaagct aagatattaa tttcaagggc aaataatact attttttatg atgattaaat
     9121 aaagattaca aaattcataa aaacttttat ttaaacacaa atgttaaata acgttttacg
     9181 ataaagaaaa
//
LOCUS       DALPQQ010000099         9189 bp    DNA     linear   BCT 22-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus strain K18-6-464
            SAMD00233528-rid16434743.denovo.099, whole genome shotgun sequence.
ACCESSION   DALPQQ010000099 DALPQQ010000000
VERSION     DALPQQ010000099.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMD00233528
            Sequence Read Archive: DRR236061
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 9189)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9189)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001543423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001543423.1
            Genome Coverage       :: 77x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/22/2022 17:09:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,811
            CDSs (total)                      :: 2,743
            Genes (coding)                    :: 2,689
            CDSs (with protein)               :: 2,689
            Genes (RNA)                       :: 68
            rRNAs                             :: 2, 4, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 4, 2 (16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 54
            CDSs (without protein)            :: 54
            Pseudo Genes (ambiguous residues) :: 0 of 54
            Pseudo Genes (frameshifted)       :: 27 of 54
            Pseudo Genes (incomplete)         :: 27 of 54
            Pseudo Genes (internal stop)      :: 10 of 54
            Pseudo Genes (multiple problems)  :: 10 of 54
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9189
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMD00233528-rid16434743.denovo.099"
                     /strain="K18-6-464"
                     /db_xref="taxon:1280"
                     /geo_loc_name="Japan: Niigata"
     gene            complement(<1..591)
                     /locus_tag="O7798_001980"
     CDS             complement(<1..591)
                     /locus_tag="O7798_001980"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498848.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF5079 family protein"
                     /protein_id="HDC2864236.1"
                     /translation="MELKVDDFVKNIKRPYLTVLGVFVVAVSLFFDAIMFFYAKLYDK
                     LPMYLLVFMAFTAVILIMMYIQEKNENYKVEKRYVVRYLTLNVIVGYTLPLLFVSIYV
                     FGVVGFGFDVFNYCLGIILMLFISWLGLFLFYKNEFDSENPNPAVNAIAIIIKLFAFG
                     GIFYISLIVPVTQQEEIFIGLSIFINIIVDALLVRSY"
     gene            862..2385
                     /locus_tag="O7798_001981"
     CDS             862..2385
                     /locus_tag="O7798_001981"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498847.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDC2864237.1"
                     /translation="MSKKLKIIIPIIIVLLLIGGIAWGVYAFFANTPKNTYLKSEQQT
                     AKMYKDYFNDRFENEVKFQEKMKDNSFLSSLELSADASDEIVKGLGIPKSVVNASKIK
                     MSYGHDPKKEKSMINLEPTIADSALGKFQLAADKDKHYFESPLFKGKYSVNNSDLLST
                     YSKLTGEDEETAKENGITNQQLNLNTLFNNAQAQQSDYSKIAEKYSELIVDKLDDDNF
                     DKGKKEEIKVNGEKYKVRPVTLTLSRADTKKITLAVLEEAKKDKDLKKLMEEQGATKD
                     FEKDIKKAIDDVKETKKDEFAKIQSKIYTEKHTIVKREITITDKENNKTKIKGTNTLE
                     DDKLKLDYALDFDQDKYTYAEAKYTIKGVSSKEKDNKYNDKYEFGKKTEYDESKIKLD
                     NQEKVDGTKRQDKGKITVALDKYSDENEFTFENNIDSDVKNNTQKSTLNIGIKYAEEP
                     INFILKSSTKLKEDIDFDDSGAKDFNSLSSKDREKLEKEIEKNGGKMFESILKKASK"
     gene            2453..3619
                     /locus_tag="O7798_001982"
     CDS             2453..3619
                     /locus_tag="O7798_001982"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498846.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HDC2864238.1"
                     /translation="MKTIHLFRIYHSFLLKKWYLIIYLLFILAALLITLTTIQHVTED
                     DNHFNIGVVDKDQSSETKLILNSIGKGSNLGKNVSIKAYDDKQAHTLLKKHKLQGYFV
                     FDKGMTKAFYKQGELPISVYTYDQQSMKSVVLSQLTDSVYQRLMRSMGGILAFQDLAP
                     KASHSDSINVMTDLLITGLNRSGAFNLEPIHLYDTGSYYAITGFLTTVFIFALSLFTV
                     LKMNQDTVLKARLKMFHFSKERLLIIRTLITWFYTMLWSIVGVVWIVFSIPNIFELYN
                     WPTLAIHLSYYVTFLILWLLLIELLTTGLLNSISKVILAIVILVLSGLTIPTIFLQHI
                     ANGVFNIQPFAVVTNQLLEIILNNYILELHPSFYLSFIALLIINLAVLVWRYRQ"
     gene            3616..4536
                     /locus_tag="O7798_001983"
     CDS             3616..4536
                     /locus_tag="O7798_001983"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498845.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HDC2864239.1"
                     /translation="MKPYIQLVVFKQWLQYILLVTTIVIALVLIGIGYRVAHDNFKIP
                     ITIQDLDQTTASKSFVNKIKQSDYVTIKKVDEDESYIEDDVTKKEAILSMQIPKGFSQ
                     KLKENRLKETIQLYGRDDFIGGIAVEIVSSSLYEQQIPNIIYEHLEDMKQHQSIDAIN
                     KSYHKHTPESKIKFVSLTKQAQHSISISLIFAVILFVSAVQVVLHYRLNQQAALQRLS
                     QYHLSRFKLYSTYVMTHTILLLLVLLAVSLYLSQPLSLIFYLKSLLLILIYEIGIVFI
                     LFHIQTISHRLFMTFIYALAMGIVYLIIFM"
     gene            4550..5209
                     /locus_tag="O7798_001984"
     CDS             4550..5209
                     /locus_tag="O7798_001984"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498844.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HDC2864240.1"
                     /translation="MIEINNLSKRYRNKQIFNHLTMSFDSNRLTVLLGDNGAGKSTLL
                     RMIAGIEKANDGTINYFGEKWNQRQIQNHIGYVPQDIALFEHMTVAENIKFFKSLCKN
                     PINDTTINEYLQQLNFDDTSAKVSTLSGGNKRKINILVGLLGQPRILILDEPTVGIDL
                     KSRHDIHQLLNIMKSKCLIILTTHHLDEVEALADDIKLIGQDPFYQHVLEDKQWTYTY
                     Y"
     gene            complement(5261..6211)
                     /gene="lytM"
                     /locus_tag="O7798_001985"
     CDS             complement(5261..6211)
                     /gene="lytM"
                     /locus_tag="O7798_001985"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498843.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycine-glycine endopeptidase LytM"
                     /protein_id="HDC2864241.1"
                     /translation="MKKLTAAAIATMGFATFTMAHQADAAETTNTQQAHTQMSTQSQD
                     VSYGTYYTIDSNGDYHHTPDGNWNQAMFDNKEYSYTFVDAQGHTHYFYNCYPKNANAN
                     GSGQTYVNPATAGDNNDYTASQSQQHINQYGYQSNVGPDASYYSHSNNNQAYNSHDGN
                     GKVNYPNGTSNQNGGSASKATASGHAKDASWLTSRKQLQPYGQYHGGGAHYGVDYAMP
                     ENSPVYSLTDGTVVQAGWSNYGGGNQVTIKEANSNNYQWYMHNNRLTVSAGDKVKAGD
                     QIAYSGSTGNSTAPHVHFQRMSGGIGNQYAVDPTSYLQSR"
     gene            complement(6537..7529)
                     /locus_tag="O7798_001986"
     CDS             complement(6537..7529)
                     /locus_tag="O7798_001986"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498842.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="linear amide C-N hydrolase"
                     /protein_id="HDC2864242.1"
                     /translation="MCTGFTIQTLNNQVLLGRTMDYDYPLDGSPAVTPRNYRWKSRTG
                     TTGQTQYGFIGTGTDMEGFIYGDGVNEHGVAISTQYFRGYSSYGSTHKADAMNITQNE
                     IVTWILGYTTSIEDMKQQASQIHVVAVYLNDIGEVPPLHYHVSDATGHTVEVSFKEGE
                     VVIKDNPIGVLTNHPDLNWHYSNLRQYINISPYPATANLLEGVTIEPLGNEAGTFGLP
                     GGFTSTERFVRMAFMKANIAQNNDKEMDLMNAFYLLDAVNIPIGIVRPHDADNHYTMY
                     QTVINLTTRTLYIKYYGSNELVALKLTDDLINRKDMTIFKPEKHITIRKLNDNQ"
     gene            7763..9139
                     /locus_tag="O7798_001987"
     CDS             7763..9139
                     /locus_tag="O7798_001987"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498841.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HDC2864243.1"
                     /translation="MNNTQSSPRSNIIIAIMLSALTYWLFAQSFINIGPLVGQTYQTS
                     PAVLNLSISLTSFATGIFMVAAGDIADKIGQLRMTYMGLIISMFASLLLIISDITALL
                     IIGRILQGLSAAILLPSTVGVLNNQFKGEHLRRAISYLMISTVGGIGLAGVIGGLIAS
                     NFGWQTNFIISIVIAFIAILLLKGTPEKVSQHSHRHPFDYKGMSIFAVMIGSFTLLLT
                     QGFEQGWFSTFSIICLSIFIITTLIFIIIERRHEVPFIDFSVLRNRPFIGAFLNNFVL
                     NSGLGVTVVFFIYAQTHLGLSAAQSGLVTLPYAIVAVAMIRLGEKATLRFGGKLMLII
                     GPLFPVIGITIISMTQLLASQYVIAVIIGFVICAIGNGLVATPGLTIAIFSMPNEKVG
                     LATGLYKMSGTLGGAFGIALSTTVFSMLQLNYAPSVAATVTFIVSIVLMILGSLSAYM
                     IIPKTVKS"
BASE COUNT         3144 a         1561 c         1425 g         3059 t
ORIGIN      
        1 atatgaccta acaagaagag catcaacaat tatattgatg aatatactta accctataaa
       61 aatctcttct tgctgtgtta caggaactat tagacttata taaaatattc ctccaaaagc
      121 aaataatttt ataataattg ctatggcatt aactgcagga ttaggatttt cactatcaaa
      181 ttcgttttta taaaataaaa ataaacctaa ccaagaaata aataacatca agataatacc
      241 tagacaataa ttgaaaacat caaatccaaa accgactaca ccaaaaacgt aaatagatac
      301 aaaaagcaat ggcaaagtat atcccacaat aacgttaagt gtgagatatc taaccacata
      361 tcttttttca actttgtaat tttcattttt ctcttgtatg tacatcataa tcaaaattac
      421 agctgtaaag gccataaaca ccagtaaata cataggcaat ttatcatata gtttagcgta
      481 gaaaaacata atcgcgtcaa aaaataatga aactgcaact acaaatactc ccaatacagt
      541 caagtatggt ctttttatat tctttacaaa atcatcgact ttcaattcca taaattcata
      601 atctccccaa tcttacttca atatttttat aagttaaata aatcttcttc gccaaaaaaa
      661 tgcatattat taagttaacc aacatttttc aagaatcatt atgtaatcaa actatttttt
      721 gtagtttatt agatttccaa taacttatta aacattatta taactaaaat tctattaatt
      781 taaacaaaat ttaaaataaa ccatttaata aaatgtattg ttctgatatg attaactcat
      841 aaataattgg gaggaagcaa aatgtctaaa aagttaaaaa ttataattcc tattattatt
      901 gtcttactat taataggtgg aatcgcatgg ggagtttatg cattttttgc taatacaccg
      961 aaaaatacat acctaaaaag tgaacaacaa acagcaaaaa tgtataaaga ttattttaat
     1021 gaccgttttg aaaatgaagt gaagttccaa gaaaagatga aagataattc gtttttatct
     1081 tcattagaat taagcgcaga tgcatcagat gaaattgtta aagggcttgg cattcctaaa
     1141 tctgttgtta atgcatcgaa aattaaaatg tcatatggac atgatcctaa aaaagagaaa
     1201 tcaatgatta atcttgaacc aacaatcgca gactctgcat tagggaaatt ccagttagct
     1261 gcagataaag ataagcatta tttcgaatca ccattattta aagggaaata tagtgttaat
     1321 aattctgatt tattatcaac ttattcaaaa cttacaggtg aagatgaaga aacagcaaaa
     1381 gaaaatggta ttacaaacca acaactaaat ttaaatactc tttttaataa tgctcaagca
     1441 caacaaagtg actacagcaa aattgccgaa aaatattccg aacttattgt cgacaaatta
     1501 gatgacgata attttgataa aggtaaaaaa gaagaaatta aggttaatgg tgaaaagtac
     1561 aaagttagac ctgtcacgtt aacacttagc agagctgaca ctaaaaaaat tacattagct
     1621 gtattagaag aagctaaaaa ggataaagac cttaaaaaat taatggaaga acaaggtgct
     1681 acaaaagact ttgaaaaaga catcaaaaaa gcaattgacg atgtcaaaga aactaaaaag
     1741 gatgaatttg ctaaaattca atctaaaatt tataccgaaa aacatacgat tgtaaaacga
     1801 gaaattacta ttacagacaa agaaaataat aaaactaaaa tcaaaggtac taatacttta
     1861 gaagacgata agttaaaact agattacgca cttgatttcg atcaagataa atacacgtat
     1921 gctgaagcga aatatacaat taaaggcgta tcttctaaag aaaaagataa taaatataat
     1981 gataaatacg aatttggtaa aaagacagaa tatgatgaat caaaaatcaa attagataac
     2041 caagaaaaag tagatggcac aaaacgtcaa gataaaggta aaatcactgt cgcattagat
     2101 aaatatagcg acgaaaatga attcactttt gaaaataata tagattctga cgtaaaaaat
     2161 aacactcaga aatctacgtt aaatatcggc atcaaatatg ctgaagaacc aattaatttc
     2221 attttaaaat ctagcacaaa attgaaagaa gatattgatt ttgatgatag tggtgcaaaa
     2281 gatttcaata gtctatcttc aaaagaccgt gaaaaacttg aaaaagaaat cgaaaaaaat
     2341 ggcggcaaaa tgtttgaatc aattttaaaa aaggcatcta aataactaaa atataaaaat
     2401 aagattggaa ggtcatcttg cctttcaatc ttatcattgg aggagtggtt aaatgaaaac
     2461 aatacatttg tttcgcatct accactcttt tttattgaaa aagtggtatt tgattatcta
     2521 tttactattt atattagcgg cactccttat tacattaacg acaatccaac atgtaacaga
     2581 agatgacaat cattttaata taggtgtcgt agataaagat caatcaagtg aaacgaaatt
     2641 aatcttaaac tctattggta aagggagtaa cctaggaaaa aacgtgagca ttaaagcata
     2701 tgatgataag caagcacata ctttgttaaa aaaacataaa cttcaaggct attttgtttt
     2761 tgataaaggt atgaccaagg cattttataa acaaggcgaa ctaccaattt cagtatatac
     2821 atatgatcaa caatccatga aaagtgtcgt gctatctcag ctaacagatt ctgtttacca
     2881 acgtcttatg cgatcaatgg gtggcatctt agcttttcaa gacttagcac cgaaagcatc
     2941 acattctgac agtatcaatg ttatgactga tttgctgatt acaggattaa accgttcagg
     3001 tgcatttaac ttagaaccga ttcatttata cgatacgggc agttattatg caattacagg
     3061 atttttaaca acggtattca tctttgcact atctttattt acagttttga aaatgaatca
     3121 agatactgta ttgaaagcgc gattgaaaat gtttcatttt tctaaagagc gtttattaat
     3181 cattcgtacg ttgattacat ggttttatac tatgttatgg agtatcgttg gtgtagtttg
     3241 gattgtgttc agtattccga atatctttga attatataat tggccaacgt tagccattca
     3301 tttaagctat tatgttacct ttttaatact gtggttatta ctcatcgaac ttttaacaac
     3361 aggcttgttg aatagtatta gtaaagtcat attagctatt gtcatcctgg tgttatctgg
     3421 tttaacaata cctacgattt ttttacaaca tatagcaaat ggtgttttca atattcaacc
     3481 gttcgcagtt gtaacaaatc aattgttaga aattatttta aacaactaca ttttagaact
     3541 gcaccctagt ttctatctta gcttcatcgc acttttgata attaatttag ctgtattggt
     3601 ttggaggtat cgtcaatgaa gccttatata caacttgttg tgttcaagca atggttacaa
     3661 tacatcttgc tcgtaacaac cattgtcatc gcactcgtac ttattggtat cggttaccgt
     3721 gtagcacatg acaacttcaa aataccgatt accattcaag atttagacca aaccactgca
     3781 tcaaaatcat tcgtcaataa aattaaacaa tctgactatg taactattaa aaaagtcgat
     3841 gaagatgaaa gctatattga agatgatgtt actaaaaagg aagctatttt aagtatgcaa
     3901 attcctaaag gtttctctca aaaattaaaa gagaaccgtt taaaagaaac gatacagtta
     3961 tatggtagag atgactttat aggtggtatt gctgtagaaa ttgttagtag ttcattatat
     4021 gagcagcaaa ttcctaacat tatttatgaa caccttgagg atatgaaaca gcatcaatcc
     4081 atcgatgcta tcaacaagtc ctatcataaa catacacctg aatctaaaat caaatttgtg
     4141 tcgcttacta aacaagcaca acactctatt tcaattagct taatctttgc ggtgatttta
     4201 tttgttagcg ctgttcaagt agtacttcat tatcgtttaa accaacaagc agcattgcaa
     4261 cgattatcac aatatcattt aagccgtttc aaactatata gtacttatgt aatgacacat
     4321 acgattttgt tattgttggt actattggca gttagtctat atttgtctca accactcagc
     4381 ttaatatttt acttaaaatc actgttactt atattgattt atgagatagg tatcgtcttt
     4441 atcttattcc atattcaaac aataagtcat cgattattca tgacatttat atatgcactt
     4501 gctatgggta tcgtatactt gattattttc atgtaaagga gcgtaactga tgatagaaat
     4561 taataacctt tcaaagcgtt accgtaacaa acagattttc aatcatttaa ctatgtcctt
     4621 tgatagtaat cgtttaaccg tattacttgg tgataatggt gctggaaaat caacattact
     4681 tcgtatgatt gctggtattg aaaaagctaa tgatggaact atcaactatt tcggcgaaaa
     4741 atggaatcaa agacaaatac aaaatcacat cggttatgtg ccacaagaca ttgcgttatt
     4801 tgaacacatg acagtggctg aaaacattaa attttttaaa tcactttgta aaaatccaat
     4861 taacgataca actatcaacg aatatttaca gcaattaaac tttgatgata cgtctgccaa
     4921 agtatctaca ttgtccggtg ggaataaacg taaaattaat atattagtag gtttactagg
     4981 tcaacctcga attctcattt tagatgaacc gacagttggt attgatttaa aatctagaca
     5041 tgacatccac caactactta acatcatgaa atctaaatgt ttaattatat taactaccca
     5101 tcatttagat gaagttgaag cacttgcaga tgatatcaag ttaattggcc aagatccttt
     5161 ttatcaacat gttttagagg acaaacaatg gacttatacc tattattaaa acgaaaaaat
     5221 cccaagctgc gtatgatatc gcaacttggg attttctgta ttatctactt tgcaagtatg
     5281 acgttgggtc tactgcatat tgattaccga tgccaccaga catacgttgg aagtgtacgt
     5341 gaggcgctgt tgaattaccc gtactacctg aatatgcaat ttggtcacca gctttgactt
     5401 tatcaccagc tgaaacagtt aaacgattat tatgcatata ccattggtag ttattactgt
     5461 tcgcttcttt aatcgttact tgattgccgc caccatagtt actccaacct gcttgtacta
     5521 ctgtaccatc agttaatgag taaactggtg aattttcagg cattgcatag tcgacaccgt
     5581 aatgcgcacc accaccgtga tattgtccat atggttgtag ttgtttacga cttgttaacc
     5641 agcttgcgtc tttcgcatga ccactagctg tcgctttact tgctgatcca ccattttgat
     5701 tagatgtgcc attaggataa ttgacctttc cattaccatc atggctgtta tacgcttggt
     5761 tgttgttact atgtgaataa tagctcgcgt ctggacctac atttgattga taaccatatt
     5821 gattaatatg ctgttggctt tgactcgctg tgtagtcatt gttatctcct gctgttgctg
     5881 gattcacata tgtttggccg cttccattgg catttgcatt ttttggataa cagttataaa
     5941 aataatgcgt atgtccttga gcatctacga atgtatagct atattcttta ttatcaaaca
     6001 ttgcttgatt ccagttacca tcaggtgtgt gatgataatc cccattagaa tcaattgtat
     6061 aataagtacc ataagatacg tcttgtgatt gtgttgacat ttgtgtatgt gcttgttggg
     6121 tgtttgtcgt ttctgctgca tctgcttgat gcgccattgt aaatgtagcg aagcccatcg
     6181 ttgcaatcgc tgctgctgtt aattttttca tgtataaaac atcctccatt aaagttaaag
     6241 ttagttttca attaaactgt actgcacata ctaaaagaat tagacaactg agtaaaggat
     6301 ttaattctca ttttccaact atttaatatt cccgaaatgt tttactaaac tcattacatt
     6361 gtcattacaa aatagccata cattgatatt aaaatgacat ctctcactgc attcgtttaa
     6421 ccttttataa attttcaaaa ttaacaacta atcgttcgtc catgttcgcg attcaacgct
     6481 aatgcatgat agtaatcatc catcaaatca tatcaaccaa attccattat caatcgctat
     6541 tgattgtcat tcaactttct aatagtgata tgcttctcag gcttaaaaat cgtcatatct
     6601 tttctattaa ttaaatcatc tgtgagcttt aatgctacta attcattgct gccataatac
     6661 ttaatatata acgttcttgt agttaaattt attacggtct gatacatcgt atagtgattg
     6721 tcagcatcat gcggacgtac aattccaatc ggtatattta ccgcatctaa taaataaaat
     6781 gcattcatta aatccatttc tttatcattg ttttgagcaa tgtttgcttt cataaatgcc
     6841 attctcacaa agcgctcagt tgaagtaaat ccacctggca atccaaatgt acctgcttca
     6901 ttgcctaaag gttcaatcgt tacaccttcc aataaatttg ctgttgctgg ataaggagaa
     6961 atattgatat attgtcttaa attactataa tgccaattta agtctggatg atttgttaag
     7021 acaccaatag gattatcttt tataaccact tcaccctctt taaatgaaac ttcgactgta
     7081 tgtccagttg catcggaaac atgataatgc aatggcggaa cttcaccgat gtcatttaaa
     7141 tatacagcta caacatgtat ttgggatgct tgttgtttca tatcttcaat gcttgttgta
     7201 tatcccaaaa tccatgtcac aatttcattt tgcgtaatat tcatcgcgtc cgctttgtgt
     7261 gttgatccat atgaactata acctcggaaa tattgtgttg aaatggcaac gccatgttca
     7321 ttaacaccat caccataaat aaaaccttcc atatctgttc ctgtgccaat aaagccatat
     7381 tgcgtttggc ctgtcgtgcc agtgcgagat ttccaacgat aatttctagg cgtcactgct
     7441 ggcgaaccat ctaatggata atcataatcc atcgtgcgtc caagaagtac ttgattattt
     7501 aaagtttgta ttgtgaatcc tgtgcacatt gttctcactc ctctgtacct tcatttactt
     7561 taatcacttt caaataaagc tgtttcactt aaacatacta taaaaaatca attatacaag
     7621 caattaattg atattcattc tcaataactg tggtatgata tgtaaggaaa tcatgactta
     7681 tgtgtgagtg aacgatcatc tatacatccg ttaacttcat ctcatgactt tctatattta
     7741 atttttacaa ggagtgacat ctgtgaataa cacacaatct tcaccacgca gtaatattat
     7801 tattgcgatt atgttgtctg cattaacata ttggttgttt gcacaatcat ttattaatat
     7861 aggacctctc gttggtcaaa cgtatcaaac ctctcctgcc gtgttaaatt tatctattag
     7921 tttaacttcc ttcgccacag gtatcttcat ggtggctgca ggtgatattg ctgataaaat
     7981 aggacaactg agaatgacat acatgggtct cataatcagt atgtttgcat ctcttctatt
     8041 aattatatcg gacatcactg cactgctcat catcggtaga attttacaag gtctatcagc
     8101 agctatcttg ttaccttcaa cagttggcgt gttaaataat caatttaaag gagaacattt
     8161 aagacgagcg attagttatc taatgattag tactgttggt ggcatcggcc tagctggtgt
     8221 tatcggcggt ttaattgcct caaatttcgg atggcaaacg aatttcatca ttagtatagt
     8281 cattgctttc attgccatat tgcttctaaa aggcacacct gaaaaagtaa gtcaacatag
     8341 ccaccgtcat ccattcgatt acaaaggtat gtcgattttc gctgttatga ttggtagctt
     8401 tacattattg ttaacacaag gattcgaaca aggttggttt agtacatttt caatcatttg
     8461 tctgagcatt tttatcatca ctacgttgat attcatcatc atcgaacgtc gacatgaagt
     8521 accttttatt gatttctcag tattacgcaa ccgtccgttc attggtgcat ttttaaataa
     8581 ctttgtttta aatagcggtc taggcgtaac agtggtcttt ttcatatatg ctcaaacaca
     8641 ccttggttta tcagctgcgc aatctggact tgttacattg ccatatgcca ttgtggcagt
     8701 tgcgatgatt cgtttaggtg aaaaagcaac attacgtttc ggtggcaaat tgatgctcat
     8761 cattggtccg ttgttccctg tcatcggcat cactattatt agcatgactc aattattggc
     8821 atcacaatat gtcattgcag ttatcattgg tttcgtcata tgtgcgatag gtaatggttt
     8881 agtcgcaaca cctggactta cgattgcaat tttcagtatg cctaatgaaa aagttggttt
     8941 agctacagga ttatataaaa tgagtggtac attaggtggc gcctttggta tagcactaag
     9001 tactacagtt ttcagtatgt tacaactaaa ctatgcacca agtgtagctg caaccgtaac
     9061 atttatagtc agcattgtat tgatgatcct tggctcattg tctgcataca tgatcattcc
     9121 aaaaacagtt aaatcttaaa tataatagaa gaattatgtt tcgaaatatc tttatcactt
     9181 taaaatgat
//
LOCUS       DALPQQ010000100         9106 bp    DNA     linear   BCT 22-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus strain K18-6-464
            SAMD00233528-rid16434743.denovo.100, whole genome shotgun sequence.
ACCESSION   DALPQQ010000100 DALPQQ010000000
VERSION     DALPQQ010000100.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMD00233528
            Sequence Read Archive: DRR236061
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 9106)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9106)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001543423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001543423.1
            Genome Coverage       :: 77x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/22/2022 17:09:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,811
            CDSs (total)                      :: 2,743
            Genes (coding)                    :: 2,689
            CDSs (with protein)               :: 2,689
            Genes (RNA)                       :: 68
            rRNAs                             :: 2, 4, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 4, 2 (16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 54
            CDSs (without protein)            :: 54
            Pseudo Genes (ambiguous residues) :: 0 of 54
            Pseudo Genes (frameshifted)       :: 27 of 54
            Pseudo Genes (incomplete)         :: 27 of 54
            Pseudo Genes (internal stop)      :: 10 of 54
            Pseudo Genes (multiple problems)  :: 10 of 54
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9106
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMD00233528-rid16434743.denovo.100"
                     /strain="K18-6-464"
                     /db_xref="taxon:1280"
                     /geo_loc_name="Japan: Niigata"
     gene            complement(21..254)
                     /locus_tag="O7798_001988"
     CDS             complement(21..254)
                     /locus_tag="O7798_001988"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501042.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDC2864244.1"
                     /translation="MLKTSAVISNTLLVIGLVCLFMMKLVLAITFFAVSLSISLVVFN
                     MMFRDRTTMKVIVNTSFLIVILAIVVAYFLLSK"
     gene            complement(482..955)
                     /locus_tag="O7798_001989"
     CDS             complement(482..955)
                     /locus_tag="O7798_001989"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501043.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1641 domain-containing protein"
                     /protein_id="HDC2864245.1"
                     /translation="MAERISSKIRRLEKSEEQIKLESLNEVTEAIAANKDSILKAIKL
                     IKTLDDAKLLDALNGAIRGRQVIINKFAVELNKDIYTGLLSNMASMVFLLGELNVSDL
                     SDFLNKVNKGLHVANQASPNAKTTIRSLLGVLKDDDMNRSLTYMLNMLKGMSREE"
     gene            complement(955..3909)
                     /gene="fdhF"
                     /locus_tag="O7798_001990"
     CDS             complement(955..3909)
                     /gene="fdhF"
                     /locus_tag="O7798_001990"
                     /EC_number="1.17.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501044.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="formate dehydrogenase subunit alpha"
                     /protein_id="HDC2864246.1"
                     /translation="MQEHLVVTLDGKDYLVEPGTNLLEFIKSQDTFVPSICYNESMGP
                     IQTCDTCTVEIDGKIERSCSTVIDRPMTVNTVNNDVKDAQKEALDRILEKHMLYCTVC
                     DYNNGDCEIHNTMDAWGLQHQTYEYKEKPYEKDYGPFYRYDPNQCILCGRCVEACQDI
                     EVNETIRIDWDREHPRVIWDNDVPINESSCVSCGQCATVCPCNAMMEVNMEGNAGYMT
                     DTEPGSLAAMIDLTKKAEPGYGPLFAISDSEAEMRKERIKKTKTVCTYCGVGCSFEVW
                     TKDREILKVQPSHDSPANKIATCVKGKFSWGHINSDQRLTKPLVRKNGEFHEVEWDEA
                     LNVIADNFTAIKEKHGPDALSFISSSKATNEESYLMQKLARQVIGTNNVDNCSRYCQA
                     PATKGLFRTVGHGGDSGSIEDLEKAAMSVLIGTNTAEAHPVIASRMKRAQKLFGQKIH
                     VFDIRKHEMAERADRFYQPKPGTDLAWLSAVTKYIIDHDLHDKAFIDEWVDDFDEYYK
                     SLETFTMAFAEEATGIPESELIKFAEECAKAESVVICWAMGITQQDIGSDSSTAISNL
                     LLVTGNYRRPGTGAYPLRGHNNVQGCSDMGSMPDKITGYQSIEADDIRAKFEKEYGVK
                     LNPKAGKDNHEMVEGIHDGEVHSLYLYGEDTGIVDSNINFVQAAFEKLDFMVVQDEFL
                     TFTATYADVVLPASPSLEKDGTFTNTERRIQRLYQALEPLGDSKPDWKIFQAIANRLG
                     FDWNYKHPSEIMDEVARLTPLYAGVSYDRLEGFNSLQWPVQPDGTDEPILYLEGFNFD
                     NGKAKLFPLSFDNYFKQDEIYDIHVNNGRLLEHFHEGNMTYQTPMIKYKVPRAFVEIS
                     PELAEDRGIHEGAEVKLISETGEAVLQVHVTDRVKGKEIYIPLNNDAMENGDLGAINL
                     LTNSDVDQYTDTPSYKRTSCRLEVITKRGKSPLNPNNFRVNKKRQPQYSVQVQKKWER
                     SDYVFPGNQVDK"
     gene            complement(4511..5458)
                     /locus_tag="O7798_001991"
     CDS             complement(4511..5458)
                     /locus_tag="O7798_001991"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000830946.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LCP family protein"
                     /protein_id="HDC2864247.1"
                     /translation="MKRSSKSKMSLPKKIFLWVFGILVILAIVAVVYVAAKIFITGNK
                     IHNPLDRNHSELRDKKVSLNDGDPFTIALFGVDSDADRKKKGGGERSDSIMILSINPK
                     TKKTEIVSIPRDTRAEIVGRGTTEKIAHAYAYGGPNMAVKSLEKLMNVPIDHYATIDM
                     DGLHNMIDSIGGVDVVSNDTFTVDGVRFTKGQQTHVNGDQALKFIRSRKEEGAGGDFG
                     RQQRQQIVLEAMANKIASPSSITHFNSLMNEIQNNVKTDLTLGDLNTIRSNYKDANDT
                     INKHQLSGQGGIQSDGLYYFIPSEQSKAESTKLLKDNLE"
     gene            complement(5591..6388)
                     /locus_tag="O7798_001992"
     CDS             complement(5591..6388)
                     /locus_tag="O7798_001992"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501046.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="inositol monophosphatase"
                     /protein_id="HDC2864248.1"
                     /translation="MTDKTLQQIDKLICSWLKQIDNVIPQLIMEMTTETKRHRFDLVT
                     NVDKQIQQQFQQFLATHFPEHQLLAEEKSNEMITNEINHLWIMDPIDGTANLVKQQED
                     YCIILAYFYEGKPMLSYVYDYPHKKLYKAIRGEGAFCNGIKMEEPPSLKLEDAIISFN
                     AQVMNLDTVQDLFDASFSYRLVGACGLDSMRVAKGQFGAHINTNPKPWDIAAQFLFAE
                     LLNLKMTTLDGKAIDHLKGAPFIISNKACHETVLKILNANGGYQKYR"
     gene            6772..7464
                     /locus_tag="O7798_001993"
     CDS             6772..7464
                     /locus_tag="O7798_001993"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501047.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YafY family transcriptional regulator"
                     /protein_id="HDC2864249.1"
                     /translation="MNKAERQNLIITAIQQNKKMTALELAKYCNVSKRTILRDIDDLE
                     NQGVKIYAHYGKNGGYQIQQAQSKIALNLSETQLSALFLVLNESQSYSTLPYKSEINA
                     IIKQCLSLPQTRLRKLLKRMDFYIKFDDTQHMTLPMLFSDILIYCTERNVMLVDHRVD
                     DNIKAENVIFIGLLCKHGHWHAVIYDIAQDKTAELEIENIIDISYSFGKTIQTRDISI
                     DNYHQFLNPIDS"
     gene            7661..8020
                     /locus_tag="O7798_001994"
                     /pseudo
     CDS             7661..8020
                     /locus_tag="O7798_001994"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000277741.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
     gene            complement(8111..8848)
                     /gene="sdpB"
                     /locus_tag="O7798_001995"
     CDS             complement(8111..8848)
                     /gene="sdpB"
                     /locus_tag="O7798_001995"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501049.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CPBP family intramembrane metalloprotease SdpB"
                     /protein_id="HDC2864250.1"
                     /translation="MENEKKKYTFKDIAWRDLLIIPIIGVIFYALTIAAYIGPILFGY
                     YEIDSNLIFVATITQALAYTIGIGAFYLFHLKVMPSRLRAGFAYIKKYWLRLSITYII
                     ALILIYTYEYMTQFLPKHLQYSETANELELNKMFEVPAFLPVAFLLIVIVGPIVEEIV
                     FRHILIGELGKKFNFIAMSIVSVFLFAFIHVTDAKSPFEFGPYLILSIILVFTYLKSG
                     RNLGSTIALHIANNFVSFVISVISIYA"
     gene            8897..>9106
                     /locus_tag="O7798_001996"
     CDS             8897..>9106
                     /locus_tag="O7798_001996"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501050.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDC2864251.1"
                     /translation="MINETKYMRQQITNLVQIIDTIKYNTLMTDWNIQTHIYKFNQIV
                     TNELNKFKGFETSYIINENQVSYYEI"
BASE COUNT         2960 a         1723 c         1201 g         3222 t
ORIGIN      
        1 tagacaaaac ctcatttttc ttacttagac aataaaaaat atgccactac aatcgctaat
       61 attacgatta aaaaagaagt gttaacgatt actttcatcg ttgttctatc tctgaacatc
      121 atattaaaga caactagact aattgataat gaaacagcaa aaaaagtaat agctaacact
      181 aatttcatca taaatagaca gactaaacct atgactaata atgtattaga aattacagct
      241 gacgttttta acattctcga attaatatgc actcaccctt tttatttaaa taacttacat
      301 aatcataata atacatgatg tttcataggc ctgtcgatga ttgattcaca atagcacgtg
      361 atttttttgt ttttcaatat tattcattta ttccatcaaa aacacccttt ttaattttta
      421 caaaaattaa aaaaagtgct cctacactgc ttgcatgtag aaacactttt tcattgtaat
      481 gttattcttc tcgagacata ccttttagca tattaagcat gtatgttaaa ctacggttca
      541 tgtcgtcatc tttcaatacg cccaatagac ttcttatagt tgtcttagca tttggactcg
      601 cttgattggc aacgtgtaat cctttattaa ctttatttag gaagtcgctt aaatctgata
      661 cattgagttc acctaataaa aataccattg aagccatatt agataatagc cctgtataaa
      721 tatctttatt aagttcaact gcaaatttat ttatgatgac ttgacgtcct cgaattgcac
      781 catttaaagc atctaatagt tttgcatcat ctaatgtttt aataagcttg attgctttta
      841 atatactatc tttattcgct gcaattgcct ctgtaacttc atttaaactt tctaacttaa
      901 tttgttcttc tgatttttct aagcgtctaa ttttagaaga tattctctca gccattattt
      961 atccacctga tttcccggga aaacataatc tgaacgttcc cattttttct gtacttgaac
     1021 actgtactgc ggttgacgtt ttttattgac acggaaatta ttagggttca acggtgactt
     1081 accacgtttc gtaattacct ccaaacgaca gctagtacgt ttataagatg gtgtatccgt
     1141 gtattgatca acatcactat tagttaataa gttaattgca cctagatctc cattttccat
     1201 cgcatcatta tttaatggaa tatagatttc tttaccttta acacgatctg tcacgtgaac
     1261 ttgtaatacc gcttctcctg tttcagaaat cagcttaact tctgcacctt catgaatgcc
     1321 tctatcttca gcaagctctg gagaaatttc aacaaatgca cgtggcactt tgtatttaat
     1381 cattggtgtt tgataagtca tattaccttc atggaagtgc tctaacaatc gaccattgtt
     1441 tacatgaata tcataaattt catcttgctt aaagtaatta tcaaatgata atgggaataa
     1501 ttttgcttta ccattatcaa aattgaatcc ttctaagtat agaataggct catcagtacc
     1561 atcaggttgt actggccatt gtaaactatt gaatccttct aaacgatcat aacttacccc
     1621 agcatataga ggtgttaagc gtgctacttc atccataatt tcactaggat gcttgtaatt
     1681 ccaatcaaat cctaatctat tagcaattgc ttggaaaatt ttccagtcag gttttgaatc
     1741 accaagaggt tctaatgctt ggtataaacg ttgaatacga cgttcggtat ttgtaaaagt
     1801 accgtctttt tcaagtgaag gacttgctgg caatacaaca tctgcgtatg ttgctgtgaa
     1861 tgttaaaaat tcatcttgga ctaccatgaa atctaatttt tcaaacgcag cttgtacaaa
     1921 attaatattt gaatccacaa tacccgtatc ttcaccatat aagtacaatg agtgtacttc
     1981 tccgtcatgt ataccttcta ccatttcatg attatcttta ccagcttttg gattcaattt
     2041 aacgccatat tctttttcaa atttagcgcg aatatcatcc gcttcaatac tttgataacc
     2101 agtaatctta tcaggcatac ttcccatatc actacatcct tgaacattat tatgtccacg
     2161 taatggatac gcaccagtac caggacgacg ataattacct gttactaata ataagtttga
     2221 aatcgctgta cttgagtcac taccaatgtc ttgttgtgta atacccattg cccaacaaat
     2281 tacaacagat tcagctttag cacattcttc agcaaattta atcaattctg attcaggaat
     2341 acctgttgct tcttcagcaa aagccattgt aaatgtttct aatgatttgt aatattcatc
     2401 aaaatcatct acccactcat caataaatgc tttatcgtgt aaatcatgat caataatata
     2461 cttagtcact gcacttaacc acgctaaatc cgtacctggt ttaggttgat aaaaacgatc
     2521 cgcacgttct gccatttcat gttttctaat atcaaataca tgtatttttt gaccaaataa
     2581 tttttgtgca cgtttcatgc gtgatgcgat aactggatga gcttcggctg tattagtacc
     2641 tatcaataca gacattgccg ctttttctaa atcttcaata ctacctgagt caccgccgtg
     2701 tccaaccgtt ctaaataagc cttttgttgc aggtgcttgg caatatcttg aacagttatc
     2761 aacgttattt gtgccaataa cttgtcttgc taatttttgc attaaatacg attcttcatt
     2821 cgtcgcttta gaagaagaaa tgaatgatag tgcatctggg ccatgctttt ctttaatagc
     2881 tgtaaaatta tctgcaatga cgtttaaagc ttcatcccat tctacttcat ggaactcacc
     2941 atttttcctt actagtggtt tagttaatcg ttgatctgaa ttaatatgtc cccatgaaaa
     3001 cttaccttta acacaagtcg caattttatt tgctggagaa tcatgtgatg gttgtacttt
     3061 taaaatttct ctatctttag tccaaacttc aaatgaacaa cccacaccac aataagtaca
     3121 cactgtttta gttttcttaa tacgctcttt acgcatttct gcttctgaat ctgagattgc
     3181 aaatagtgga ccataaccag gttctgcttt tttagttaaa tcaatcattg ctgctaatga
     3241 accaggttct gtatcagtca tataacccgc attaccttcc atattcactt ccatcatggc
     3301 attacatgga cataccgtcg cacattgacc acaagataca catgaagact cattaatcgg
     3361 tacatcatta tcccaaataa cacgtggatg ttcacgatcc caatcaattc taatagtttc
     3421 attcacttcg atatcttgac atgcttctac acaacgccca cataagatac attgatttgg
     3481 atcataacga taaaatgggc cgtaatcttt ttcgtatggc ttctctttat attcatacgt
     3541 ttgatgctga agcccccatg catccatcgt attatgaatt tcacaatcac cattattata
     3601 atcacatact gtacaataca gcatatgctt ttctaaaatt cgatcaagcg cttctttttg
     3661 agcatctttc acatcattgt tcacagtatt tacagtcatt ggacgatcaa tcaccgtact
     3721 acatgaacgt tcaattttac cgtcaatctc aacagtacat gtatcacatg tttgaattgg
     3781 tcccatcgac tcgttataac aaattgaagg tacaaaagta tcttgtgatt taataaattc
     3841 aagtaaattc gtacctggtt ctacaagata atcttttcca tcaagtgtaa ccaccaaatg
     3901 ttcttgcata ttactcaccc cgtctatata tattttccgt aaatgacttt taataaattg
     3961 ctcatatcca cctaaaataa cgatgcccca cacatctttc agatagaatt aatttaattg
     4021 tattacttta tgtactagtt gttaagtaaa attttgtatt ttgccttttt acaatcattt
     4081 ttatttgaaa tattttgcgc gaaattaaat catctttttg tttaattgaa aataattatc
     4141 attattagtt ttccaattat ctgtttcacg ctttttgcca tatctttcac aaccttatta
     4201 atgacaatat ttaataatca cctcacctaa aaatcgttat actatttata aatacccttt
     4261 ttctgaaaat taataaccca agtttgataa atatctacta tcatttagaa ggtaatattt
     4321 atctttaaat taaatttgta atggattaat ttataaaaat caaatcaggc attaaataaa
     4381 atagcccata aatacaaagt gttatcacct tctatttacg ggctattagt tctattcgtt
     4441 attctattta cagatcattc tatctaatta atttgtgtac aattttgata acttattttc
     4501 ccttagttta ctactctaga ttatctttta ataacttagt actttcagct tttgactgct
     4561 cactaggaat gaagtagtac aatccgtcac tttgaatgcc gccttgacca ctcaattgat
     4621 gtttattaat cgtgtcatta gcatctttat aattgcttct aatcgtattc aaatcaccta
     4681 atgttaaatc tgttttaaca ttattttgaa tttcattcat tagactatta aaatgtgtaa
     4741 tcgatgatgg gcttgcaatc ttattggcca tcgcttcaag cacaatttgc tgacgttgtt
     4801 gtcgaccaaa gtcaccacca gcaccttctt ctttacgact tctaataaac ttcaatgctt
     4861 gatcaccatt tacatgtgtc tgctgtcctt ttgtaaaacg aacaccatca acagtgaatg
     4921 tatcattact tactacatca acaccgccga tgctatctat catattatgc aaaccatcca
     4981 tatcgattgt cgcataatga tcaattggca cattcattaa tttttcaagt gatttaacag
     5041 ccatatttgg tccaccatat gcataggcat gtgcaatttt ttcagtagta ccacggccaa
     5101 caatttccgc tcttgtatca cgcggtatac ttactatttc agttttcttc gttttagggt
     5161 tgatagataa aatcataata ctatcactac gctctccgcc accctttttc ttacgatcag
     5221 catctgaatc gacaccaaat aaagcgattg tgaatggatc accatcgttt aaactcactt
     5281 ttttatctct taattctgaa tgattgcgat ctaacggatt gtgtatctta ttaccagtaa
     5341 taaaaatttt agcagctaca tacacaacag ctacaatcgc taagattact aaaataccga
     5401 atacccataa aaatattttt ttcggtaggc tcattttact tttagacgaa cgtttcaatc
     5461 ccaccactcc tttactattc cttacatact ttgtctgttt tctctattta ttatatagta
     5521 aaataatttt tttactatac ttctgtagac gtataactat tttttatcat tttttatctc
     5581 tagagaatat ctatctgtat ttttgataac caccatttgc atttaaaatt ttaagtaccg
     5641 tttcatgaca tgctttatta cttataataa aaggtgcacc ctttaaatga tcaattgcct
     5701 taccatctaa agtcgtcatt tttagattca atagttctgc aaataaaaac tgtgcagcaa
     5761 tgtcccaagg tttaggattt gtattaatat gtgccccaaa ttgacctttt gccactcgca
     5821 tagaatctaa tccgcaagca ccaactaaac gataactaaa tgaggcgtca aataaatctt
     5881 gcaccgtatc tagattcatc acttgtgcat taaacgatat aatagcgtct tccaatttta
     5941 acgatggtgg ttcttccatc ttaattccat tacaaaaagc accttctcct cgtattgctt
     6001 tataaagctt tttatgcgga taatcatata cgtacgataa cattggttta ccttcataaa
     6061 aatacgccaa tataatacaa taatcttctt gctgttttac taaattggca gttccatcaa
     6121 tgggatccat aatccataaa tgattaattt cattcgtaat catttcatta cttttttctt
     6181 ccgctaatag ttggtgttcc ggaaaatgtg ttgctaaaaa ttgttggaat tgttgttgaa
     6241 tctgtttatc tacatttgta actaaatcaa atcgatgacg cttagtttct gtagtcattt
     6301 ccataattaa ttgcggaata acattgtcta tttgtttcaa ccacgaacat attaacttat
     6361 ctatttgctg taatgtttta tctgtcattt cgtccaccac ttctcatatc attatcattt
     6421 tattattacc ctatattaaa agaatcaaca atacaactga agacttcttc attttatgca
     6481 taaaaaaatc ggctagtcac gtgctagccg acaaatagaa aggaaagtaa gtaataaata
     6541 ttgaagatgt tgtgatgtaa cttgaacgat taaaagctat ctgttatata gctctacccc
     6601 tttgtttaat cgctccccct gttacaagta atatcatagc acaatctttt ttaaaatgta
     6661 agcgttttcc acaaaatttt tacgattttt ttaaaagata ttgaaaatgt cctcattgtc
     6721 actcttatgt tatactttgt gtaatatatc atcttttagg aggtggctgt catgaataaa
     6781 gctgaaaggc aaaatttaat aattactgca attcaacaaa ataaaaaaat gaccgcttta
     6841 gaattagcta aatattgcaa cgtatccaaa cgcacaattt taagagatat tgatgattta
     6901 gaaaatcaag gtgttaaaat ttatgcgcat tatgggaaaa atggtggtta ccaaatacaa
     6961 caagcacaat ctaaaattgc attaaactta tctgaaacac aattatcagc cttattttta
     7021 gtgcttaatg aaagtcagtc gtactcgaca ttaccatata aaagcgaaat caacgcaatt
     7081 ataaaacaat gtttaagtct tccacaaaca cgcttaagaa aattgcttaa acgcatggac
     7141 ttttatatta aatttgatga cacacaacat atgacactcc caatgctgtt ttccgacatt
     7201 ttaatttatt gtacagaacg aaatgtgatg ttagtagatc atagggttga tgataatatt
     7261 aaagctgaaa acgttatatt tattggcctt ttgtgtaaac atggacattg gcatgcagtc
     7321 atttatgaca ttgctcaaga caaaactgcc gaactcgaaa ttgaaaatat tatagatatt
     7381 tcgtattcat tcggtaagac gattcaaacc agagacatat ccattgataa ctatcatcaa
     7441 tttttaaacc ccatcgattc ctaaaaaaca gcagtaagat gattttcaat tagaaaatat
     7501 cttgctgctg ttctctattt atacaatact tcgtattgaa tggcttcgct ttcctagggt
     7561 gccgtctcag ccttggtctt cgactggcac tgctccctca ggagtctcgc cattaatact
     7621 acgtattaac atgtaatttt actttgaaat acttaaaaaa ataaaacact ttgcccaact
     7681 tacactacca atagaaactg ctgttagaat tcctcaaaat gatatttcgc gatatgttaa
     7741 tgaaattgtt aaaaagatag ctgatagcga attcgatgaa ttcagacatc atcgtggcgc
     7801 aacatcctat catctaaaaa tgatgttaaa aatcacctca tattcatata ctcaatctga
     7861 attttctggc cgtagaatag aaaaattact tcataacagt attcgaatga tgtggttagc
     7921 tcaagatcaa acaccttctt ataaaactat taatcttttt agagtgaatc ctaatactga
     7981 tgcgctaatt gaatctttat ttattcagtt tcataataaa atgcatatca aaaaagctga
     8041 tttctatcaa ataattaata gaaatcagct tttttcattg cctaaaaact taatgtcccg
     8101 acctctttat ctacgcataa atacttatta ctgatataac gaaagaaaca aaattatttg
     8161 ctatatgtaa tgcaattgtt gaacctaggt ttcttccaga ttttaaataa gtgaaaacta
     8221 atatgatgga tagtatgaga tatggaccaa actcaaacgg cgactttgca tcagtcacat
     8281 gaataaatgc aaataagaac accgaaacaa tactcatagc tataaaatta aacttcttac
     8341 ctaattctcc aattaaaata tgtctaaata cgatttcttc aactattgga cctacaatca
     8401 caattaataa gaatgctaca ggtaaaaatg caggcacttc aaacatttta tttagctcaa
     8461 gttcattggc tgtttcacta tattgcaaat gtttaggtag aaactgtgtc atatattcat
     8521 atgtataaat taagatgaga gcaataatat acgttattga caatctaagc caatattttt
     8581 tgatatacgc aaaaccagct cgaagccttg atggcatcac ttttaaatga aataaataaa
     8641 atgcgccaat cccaatcgta tatgctaaag cttgtgtgat agtcgctaca aatatcagat
     8701 tactatcgat ttcataataa ccaaacaaaa ttggtcctat gtaagctgca attgtgagtg
     8761 cataaaatat aacacctata attggaatta taagcaaatc tctccatgct atatctttaa
     8821 acgtgtattt ctttttttca ttttccactg ttatatcctt tcctgtttaa taattgattt
     8881 ttggaggtac ttctacatga taaacgaaac taagtatatg agacaacaaa ttactaattt
     8941 ggttcaaatc attgatacga ttaaatataa tactttaatg acagattgga acattcaaac
     9001 gcatatttat aaatttaacc aaatagttac taatgaattg aataagttca aaggctttga
     9061 aacatcatat ataataaacg aaaatcaagt ttcctattat gaaatt
//
LOCUS       DALPQQ010000101         9056 bp    DNA     linear   BCT 22-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus strain K18-6-464
            SAMD00233528-rid16434743.denovo.101, whole genome shotgun sequence.
ACCESSION   DALPQQ010000101 DALPQQ010000000
VERSION     DALPQQ010000101.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMD00233528
            Sequence Read Archive: DRR236061
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 9056)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9056)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001543423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001543423.1
            Genome Coverage       :: 77x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/22/2022 17:09:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,811
            CDSs (total)                      :: 2,743
            Genes (coding)                    :: 2,689
            CDSs (with protein)               :: 2,689
            Genes (RNA)                       :: 68
            rRNAs                             :: 2, 4, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 4, 2 (16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 54
            CDSs (without protein)            :: 54
            Pseudo Genes (ambiguous residues) :: 0 of 54
            Pseudo Genes (frameshifted)       :: 27 of 54
            Pseudo Genes (incomplete)         :: 27 of 54
            Pseudo Genes (internal stop)      :: 10 of 54
            Pseudo Genes (multiple problems)  :: 10 of 54
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9056
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMD00233528-rid16434743.denovo.101"
                     /strain="K18-6-464"
                     /db_xref="taxon:1280"
                     /geo_loc_name="Japan: Niigata"
     gene            5..80
                     /locus_tag="O7798_001997"
     tRNA            5..80
                     /locus_tag="O7798_001997"
                     /product="tRNA-Val"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:38..40,aa:Val,seq:tac)
     gene            97..172
                     /locus_tag="O7798_001998"
     tRNA            97..172
                     /locus_tag="O7798_001998"
                     /product="tRNA-Thr"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:130..132,aa:Thr,seq:tgt)
     gene            178..253
                     /locus_tag="O7798_001999"
     tRNA            178..253
                     /locus_tag="O7798_001999"
                     /product="tRNA-Lys"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:211..213,aa:Lys,seq:ttt)
     gene            257..338
                     /locus_tag="O7798_002000"
     tRNA            257..338
                     /locus_tag="O7798_002000"
                     /product="tRNA-Leu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:291..293,aa:Leu,seq:tag)
     gene            342..416
                     /locus_tag="O7798_002001"
     tRNA            342..416
                     /locus_tag="O7798_002001"
                     /product="tRNA-Gly"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:374..376,aa:Gly,seq:gcc)
     gene            427..515
                     /locus_tag="O7798_002002"
     tRNA            427..515
                     /locus_tag="O7798_002002"
                     /product="tRNA-Leu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:461..463,aa:Leu,seq:taa)
     gene            534..607
                     /locus_tag="O7798_002003"
     tRNA            534..607
                     /locus_tag="O7798_002003"
                     /product="tRNA-Arg"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:568..570,aa:Arg,seq:acg)
     gene            617..690
                     /locus_tag="O7798_002004"
     tRNA            617..690
                     /locus_tag="O7798_002004"
                     /product="tRNA-Pro"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:651..653,aa:Pro,seq:tgg)
     gene            708..783
                     /locus_tag="O7798_002005"
     tRNA            708..783
                     /locus_tag="O7798_002005"
                     /product="tRNA-Ala"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:741..743,aa:Ala,seq:tgc)
     gene            805..878
                     /locus_tag="O7798_002006"
     tRNA            805..878
                     /locus_tag="O7798_002006"
                     /product="tRNA-Met"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:839..841,aa:Met,seq:cat)
     gene            907..980
                     /locus_tag="O7798_002007"
     tRNA            907..980
                     /locus_tag="O7798_002007"
                     /product="tRNA-Ile"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:941..943,aa:Ile,seq:cat)
     gene            990..1079
                     /locus_tag="O7798_002008"
     tRNA            990..1079
                     /locus_tag="O7798_002008"
                     /product="tRNA-Ser"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:1026..1028,aa:Ser,seq:tga)
     gene            1090..1165
                     /locus_tag="O7798_002009"
     tRNA            1090..1165
                     /locus_tag="O7798_002009"
                     /product="tRNA-Asp"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:1123..1125,aa:Asp,seq:gtc)
     gene            1204..1296
                     /locus_tag="O7798_002010"
     tRNA            1204..1296
                     /locus_tag="O7798_002010"
                     /product="tRNA-Ser"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:1240..1242,aa:Ser,seq:tga)
     gene            1311..1384
                     /locus_tag="O7798_002011"
     tRNA            1311..1384
                     /locus_tag="O7798_002011"
                     /product="tRNA-Met"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:1345..1347,aa:Met,seq:cat)
     gene            1394..1469
                     /locus_tag="O7798_002012"
     tRNA            1394..1469
                     /locus_tag="O7798_002012"
                     /product="tRNA-Asp"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:1427..1429,aa:Asp,seq:gtc)
     gene            1488..1560
                     /locus_tag="O7798_002013"
     tRNA            1488..1560
                     /locus_tag="O7798_002013"
                     /product="tRNA-Phe"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:1521..1523,aa:Phe,seq:gaa)
     gene            1568..1643
                     /locus_tag="O7798_002014"
     tRNA            1568..1643
                     /locus_tag="O7798_002014"
                     /product="tRNA-Thr"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:1601..1603,aa:Thr,seq:tgt)
     gene            1649..1729
                     /locus_tag="O7798_002015"
     tRNA            1649..1729
                     /locus_tag="O7798_002015"
                     /product="tRNA-Tyr"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:1683..1685,aa:Tyr,seq:gta)
     gene            1745..1818
                     /locus_tag="O7798_002016"
     tRNA            1745..1818
                     /locus_tag="O7798_002016"
                     /product="tRNA-Trp"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:1777..1779,aa:Trp,seq:cca)
     gene            1821..1893
                     /locus_tag="O7798_002017"
     tRNA            1821..1893
                     /locus_tag="O7798_002017"
                     /product="tRNA-His"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:1854..1856,aa:His,seq:gtg)
     gene            1905..1976
                     /locus_tag="O7798_002018"
     tRNA            1905..1976
                     /locus_tag="O7798_002018"
                     /product="tRNA-Gln"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:1937..1939,aa:Gln,seq:ttg)
     gene            1982..2055
                     /locus_tag="O7798_002019"
     tRNA            1982..2055
                     /locus_tag="O7798_002019"
                     /product="tRNA-Cys"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:2014..2016,aa:Cys,seq:gca)
     gene            2063..2137
                     /locus_tag="O7798_002020"
     tRNA            2063..2137
                     /locus_tag="O7798_002020"
                     /product="tRNA-Gly"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:2096..2098,aa:Gly,seq:tcc)
     gene            2241..2315
                     /locus_tag="O7798_002021"
     tRNA            2241..2315
                     /locus_tag="O7798_002021"
                     /product="tRNA-Gly"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:2274..2276,aa:Gly,seq:tcc)
     gene            2354..2437
                     /locus_tag="O7798_002022"
     tRNA            2354..2437
                     /locus_tag="O7798_002022"
                     /product="tRNA-Leu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:2388..2390,aa:Leu,seq:caa)
     gene            2985..4046
                     /locus_tag="O7798_002023"
     CDS             2985..4046
                     /locus_tag="O7798_002023"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500489.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS transporter subunit IIC"
                     /protein_id="HDC2864252.1"
                     /translation="MSNANNADNKQFFSKILNSIGAGVVIALVPNALLGEVLKIFKSG
                     NEILELTYQLVILIQSFMAFIIGVLAAHQFKFNGAGAAIVGTSAMIGSGAVVYSNNSF
                     MLKGIGDIINTSLVVIIACLIYMVLQNKLGSFELIILPVLVPIVSGGIGLITLPYIRK
                     ITQAIGNVIHSFTDLNPLLMSILISVAFSLLMVTPISLVAIATAISLNGLGSGAANLG
                     IVAACVTFLFGSLRVNSIGVNAVLLIGAAKMMIPVYLKNLIISIPLTINGIITGIIAY
                     VLQVKGTPLSAGFGYTGLVGPINAFNRMSGDPTMNIILLALGYFVIPFVSAFIVHELC
                     KKFIPIYSNDIYKFEVPKQ"
     gene            4304..5761
                     /locus_tag="O7798_002024"
     CDS             4304..5761
                     /locus_tag="O7798_002024"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500488.1"
                     /note="The N-terminal region of this protein, as described
                     by TIGR01726, is a three transmembrane segment that
                     identifies a subfamily of ABC transporter permease
                     subunits, which specificities that include histidine,
                     arginine, glutamine, glutamate, L-cystine (sic), the
                     opines (in Agrobacterium) octopine and nopaline, etc;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease subunit"
                     /protein_id="HDC2864253.1"
                     /translation="MKCLIRFILVLGLLISSAMVYINPTAHAEQDQTWEKIKERGELR
                     VGLSADYAPMEFEHTVNGKTEYAGVDIDLAKKIAKDNNLKLKIVNMSFDSLLGALKTG
                     KIDIIISGMTSTPERKKQVDFSDSYMMTKNIMLVKKDKVNEYKDIKDFNNKKVGAQKG
                     TEQEKIAQTEIENASITSLSRLPDVILALKSGKVEGAVVEKPVAEAYLKQNPKLGISN
                     VKFNEEEKDTVIAVPKDSPKLLSQINKTIKEVKDKGLIDKYMTNAANAMNDDSGFISK
                     YGSFFLKGIKITILISLIGVALGSILGAFVALMKLSKIKIISWIASIYIEILRGTPML
                     VQVFIVFFGITAALGLDISALVCGTIALVINSSAYIAEIIRAGINAVDKGQMEAARSL
                     GLNYRQTMKSVIMPQAIKNILPALGNEFVTLIKESSIVSTIGVGEIMFNAQVVQGISF
                     DPFTPLIVAAALYFVLTFVLTRIMNMIEGRLNASD"
     gene            5754..6476
                     /locus_tag="O7798_002025"
     CDS             5754..6476
                     /locus_tag="O7798_002025"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017465289.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter ATP-binding protein"
                     /protein_id="HDC2864254.1"
                     /translation="MIKINNLNKVFGDNEVLKDINLEINQGEVVAIIGPSGSGKSTLL
                     RCMNLLEVPTKGQVIFEGNDLTEKGTQVDKLRQKMGMVFQNFNLFPHKKVVDNIILAP
                     KLLKKDNNDELHKEALSLLDKVGLKEKADVYPNQLSGGQKQRVAIARALAMHPDVILF
                     DEPTSALDPEVVGDVLKVMKDLAKEGMTMVVVTHEMGFAKDVSDKVIFMADGVVVESG
                     TPVEIFEQPQHERTQNFLARVL"
     gene            6627..7754
                     /gene="queG"
                     /locus_tag="O7798_002026"
     CDS             6627..7754
                     /gene="queG"
                     /locus_tag="O7798_002026"
                     /EC_number="1.17.99.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000379983.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA epoxyqueuosine(34) reductase QueG"
                     /protein_id="HDC2864255.1"
                     /translation="MDTKQLKQDIIDYAYTIGIDSIGFTTADPFDELKQKLEAYHANG
                     YASGFEESDIALRTEPKLSLPTARSIIAIAVGYPNKLKGAPKSVRGDRRGLFARASWG
                     QDYHTIMRKRLDMLAAFIESKVPDVEIKSMVDTGVLSDRAVAERAGLGFVGRNGFVIN
                     PKLGTWTYLGEMLVSIPFEPDDPLLDSCGDCTICVDRCPTSALVGNGQLNSQKCISFL
                     TQTKGYMPDQYRYKIGNRLYGCDTCQQVCPKNRGINTEQDDIILEPEILKPRLVPLLR
                     MSNKEFKQTYGHLAGAWRGKKPIQRNAILALAHFNEVDAIPELKKVATTDERPLIRAT
                     AYWAIGQILGEEARDFINANYDQEDAEVQNEMIKGLDTRRE"
     gene            7759..8229
                     /gene="trmL"
                     /locus_tag="O7798_002027"
     CDS             7759..8229
                     /gene="trmL"
                     /locus_tag="O7798_002027"
                     /EC_number="2.1.1.207"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500485.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA
                     (uridine(34)/cytosine(34)/5-
                     carboxymethylaminomethyluridine(34)-2'-O)-
                     methyltransferase TrmL"
                     /protein_id="HDC2864256.1"
                     /translation="MTNHIVLYQPEIPANTGNIARTCAGTNTHLHLIKPLGFRTDDKM
                     LKRAGLDYWEFVNITYHDSIEAFFEVTNGEYYLLTKFGKKTYSDFDFSNHDKDFYFIF
                     GKETTGLPDWVKEKYQDTALRIPMSEHIRSLNLSNTAALLIYEALRQQDFPGLN"
     gene            8388..8987
                     /locus_tag="O7798_002028"
     CDS             8388..8987
                     /locus_tag="O7798_002028"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500484.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucosamine-6-phosphate isomerase"
                     /protein_id="HDC2864257.1"
                     /translation="MAMNFKVFDNSQLVAEYAADIIRKQFNNNPTTIAGFHLDTDQAP
                     VLDELKKNVEKHAVDFSQINILDYDDKKSYFEALGVPAGQVYPIAYEKDAIELIADKI
                     KTKENKGKLTLQVVSIDEQGKLNVSIRQGLMEAREIFLVVTGANKRDVVEKLYQENGK
                     TSFEPADLKAHRMVNVILDKEAAAGLPEDVKAYFTSRFA"
BASE COUNT         2906 a         1428 c         1871 g         2851 t
ORIGIN      
        1 aatcggagaa ttagctcagc tgggagagca tctgccttac aagcagaggg tcggcggttc
       61 gaacccgtca ttctccacca tttattctta catattgccg gcctagctca attggtagag
      121 caactgactt gtaatcagta ggttgggggt tcaagtcctc tggccggcac catggaagag
      181 ccattagctc agttggtaga gcatctgact tttaatcaga gggtcagagg ttcgaatcct
      241 ctatggctca ccatttgcgg gtgtggcgga attggcagac gcactagact taggatctag
      301 cgccttacgg cgtgggggtt cgactccctt cacccgcata tgcagaagta gttcagcggt
      361 agaatacaac cttgccaagg ttggggtcgc gggttcgaat cccgtcttct gctccatttt
      421 tatagtgccg gggtggcgga actggcagac gcacaggact taaaatcctg cggtgagtga
      481 tcaccgtacc ggttcgattc cggtcctcgg caccattttc aataaaaaca tatgcgcccg
      541 tagctcaatt ggatagagcg tttgactacg gatcaagagg ttatgggttc gactcctatc
      601 gggcgcgtta attatacggg aagtagctca gcttggtaga gcacttggtt tgggaccaag
      661 gggtcgcagg ttcgaatcct gtcttcccga tatactgtaa ttattatggg ggcttagctc
      721 agctgggaga gcgcctgctt tgcacgcagg aggtcagcgg ttcgatcccg ctagtctcca
      781 ccatattatt tacaaactat ataaggcggt gtagctcagc tggctagagc gtacggttca
      841 tacccgtgag gtcgggggtt cgatcccctc caccgccact atttattagt tgtaaaatta
      901 tatttaggac ctttagctca gttggttaga gctaacggct cataaccgtt cggtcgcagg
      961 ttcgagtcct gcaaggtcca tataattttg gaggaatacc caagtccggc tgaagggatc
     1021 ggtcttgaaa accgacaggg gcttaacggc tcgcgggggt tcgaatccct cttcctccgt
     1081 tttactaatg gtctcgtagt gtagcggtta acacgcctgc ctgtcacgca ggagatcgcg
     1141 ggttcgattc ccgtcgagac cgccatttaa ttttataatt aatagcgatt tacctataat
     1201 aatggaggaa tacccaagtc cggctgaagg gatcggtctt gaaaaccgac agggccttaa
     1261 cgggccgcgg gggttcgaat ccctcttcct ccgccattat tttttattat cgcgggatgg
     1321 agcagttcgg tagctcgtcg ggctcataac ccgaaggtcg gtggttcaaa tccgcctccc
     1381 gcaatatttt ataggtctcg tagtgtagcg gttaacacgc ctgcctgtca cgcaggagat
     1441 cgcgggttcg attcccgtcg agaccgccat cattacattt ttattatggt tcagtagctc
     1501 agttggtaga gcaatggatt gaagctccat gtgtcggcag ttcgactctg tcctgaacca
     1561 tttcttagcc ggcctagctc aattggtaga gcaactgact tgtaatcagt aggttggggg
     1621 ttcaagtcct ctggccggca ccatttatgg aggggtagcg aagtggctaa acgcggcgga
     1681 ctgtaaatcc gctccttcgg gttcggcagt tcgaatctgc ccccctccat ttattatttt
     1741 taataggggc atagttcaac ggtagaatag aggtctccaa aacctttggt gtgggttcga
     1801 ttcctactgc ccctgccatg gcggctgtgg tgaagtggtt aacacatcgg attgtggttc
     1861 cgacattcga gggttcgatc cccttcagcc gcccttatta ttaatgggct atagccaagc
     1921 ggtaaggcaa cggactttga ctccgtcact cgttggttcg aatccagcta gcccagttat
     1981 tggcggcata gccaagtggt aaggcagagg tctgcaaaac ctttatcacc ggttcaaatc
     2041 cggttgccgc ctccaggttt atgcgggagt agttcaactt ttagaacacg ttccttcccg
     2101 gaacgaggta taggtgcaaa tcctatcttc cgctccataa tttaataata atgcgggagt
     2161 atttcaactc ttagaataca ttccttcctg gaatgaggta taggtgtaaa tcctatcttc
     2221 cgctccataa tttaatattt gcgggagtag ttcaactttt agaacacgtt ccttcccgga
     2281 acgaggtata ggtgtaaatc ctatcttccg ctccataatt gcttccaaag ggaagttttt
     2341 tgtttaccat taagccggtg tggcggaatt ggcagacgcg cgggactcaa aatcccgttc
     2401 cacttgtgga gtgtcggttc gaccccgacc accggtataa ttaactgtta tttacataac
     2461 ataacgtatt agaaaccttg taaaacaagg tttcttttta tttctctcta tacaatacaa
     2521 ataaaagtgg actcaaatgg cacacgcttt aatagactct atgtcaaatt gtaatgatga
     2581 gttcaatatt ggaagttaag caactatgca ttgtttaact tctttttttg gtattacatt
     2641 aatgataatg attatattat ctggggttat atatttgttt caacttttct aataatatat
     2701 ttgtaaaagt gctattttat tgtgctttat accaagtcga ttcaatttat ctatcttaat
     2761 agtaatatgg ctattttaat atttacaatt tattacatta ttagtcacag gatgtaatta
     2821 gtagtatttt aaaattaaca tgacattgat tagtgagtag attgtttaaa tttgctttat
     2881 tcaatttgtg gattgttata tttagattaa attagccaac taatcattgt taaagttaat
     2941 tttctataat atgatgagtt taatgttcaa attggaggtc gtttatgagt aacgcaaata
     3001 atgctgataa taaacagttt ttcagtaaga ttttaaattc tattggtgct ggtgttgtta
     3061 ttgcacttgt tccgaatgct ttattaggtg aagtattaaa aatatttaaa agtggtaatg
     3121 aaattttaga attaacgtat cagttagtga tactaattca atcatttatg gcatttatta
     3181 ttggggtttt agctgctcat caatttaaat ttaatggtgc aggtgctgct atagtaggta
     3241 catcagctat gattggttca ggtgctgttg tatatagcaa taatagtttt atgttaaaag
     3301 gtataggtga cattataaat acgagtttgg ttgttattat tgcatgtctt atatatatgg
     3361 tattacaaaa caaacttgga tcttttgaat taattatatt accagtttta gtacctatcg
     3421 ttagtggggg tatcggtcta atcacattac cttacattcg aaaaattact caagcaattg
     3481 gaaatgtaat tcattctttt acagacttaa atccgttgtt aatgtctata cttattagtg
     3541 tggcattttc attattaatg gtaacaccaa tatcgttagt agcgattgca actgcgatta
     3601 gtttaaacgg actaggaagt ggagcagcaa acctaggtat agtggctgcc tgtgttactt
     3661 tcttatttgg ctcattgcgt gtcaattcta ttggtgtaaa tgcagtttta ctcataggag
     3721 ctgcaaaaat gatgatccca gtttacttga aaaatttaat tatttcgata ccattgacta
     3781 taaatggaat aattactgga atcattgctt acgttcttca ggttaaagga acaccattgt
     3841 ctgctggatt tggatataca ggattagttg gcccaataaa tgcatttaac cgaatgtcag
     3901 gtgatccaac aatgaatatt attttattag cacttggtta ttttgtcata ccatttgtat
     3961 cggcatttat tgttcatgaa ttgtgtaaaa aattcattcc tatatattct aatgatattt
     4021 ataaatttga agttccaaaa caataattta tagcttgatg acaagaataa gttttaatat
     4081 atgataaata taggcgttac tgtcaataag atattgatag tagcgctttt ttgattgatt
     4141 ttaaaatgtg agatttgttc acgtataata gcggattttt tatgtacagt cttttaaaaa
     4201 gaagcttttc tttatattga taaaaataca tttataaaac actattgcat caaaatgtat
     4261 taatatgtat aattatgaat attaattagg gagggctgta taaatgaagt gtttaattag
     4321 gtttatatta gtattagggt tgttaattag cagtgctatg gtgtatatca atcccacagc
     4381 acatgctgaa caagatcaaa catgggagaa gattaaagaa cgcggtgaac ttagagtggg
     4441 tctttctgcg gattatgcac caatggaatt tgagcataca gttaatggta agactgagta
     4501 tgcaggtgta gatattgatt tagctaaaaa aattgcgaaa gataataatt taaaattaaa
     4561 aatcgtcaat atgtcatttg atagtttgtt aggagctctt aaaactggaa aaattgatat
     4621 tattatttcc ggaatgactt caacgcctga acgtaagaag caagttgatt tttcagattc
     4681 atatatgatg actaaaaata tcatgcttgt aaagaaagat aaagttaatg aatataaaga
     4741 tatcaaagac tttaataata aaaaagtagg ggcacaaaag ggaactgaac aagaaaaaat
     4801 cgctcaaacc gaaattgaaa atgcatctat tacttcatta agccgtttac cagacgttat
     4861 attagcattg aaaagtggaa aggttgaagg tgctgtagtt gaaaaacctg tagcagaagc
     4921 atatttaaaa caaaatccta aattaggaat ttccaatgtg aaatttaatg aagaagaaaa
     4981 agatacagtg atagcagtgc caaaagattc accaaaatta ttgtcacaaa ttaataaaac
     5041 gattaaggag gttaaagata aaggattaat cgataaatat atgactaatg ctgcaaatgc
     5101 gatgaatgat gacagtggtt ttatttctaa gtatggtagt tttttcttga aaggaattaa
     5161 gattacaata ttaatttcac ttatcggtgt tgcattaggt tctattttag gtgcattcgt
     5221 tgcgttaatg aaattaagta aaataaaaat tatttcatgg attgcttcta tctatatcga
     5281 aatattaaga ggaacaccaa tgttagttca agtatttatc gtattctttg gtataactgc
     5341 tgcattagga ctagacattt cagctcttgt ttgtggaaca attgcattag ttattaattc
     5401 ctcagcttac attgctgaaa ttattcgtgc aggtataaat gctgttgata aaggccaaat
     5461 ggaagccgca cgtagtctag gtttgaatta tagacaaacg atgaaaagtg taattatgcc
     5521 acaagcaatt aaaaatattt taccagcttt aggtaatgaa tttgtcactt taattaaaga
     5581 atcatctatt gtgtcaacaa ttggagttgg cgaaattatg tttaatgcac aagtggttca
     5641 aggtatttca tttgacccat tcacaccatt aatagtggca gcagcattat actttgtctt
     5701 aacatttgta cttacacgca ttatgaacat gattgaaggg agattgaatg ccagtgatta
     5761 aaataaacaa tcttaataaa gtttttggag ataatgaagt tttaaaagat atcaatcttg
     5821 aaatcaatca aggggaagta gtagcaataa taggtccatc tggtagtggt aaaagtacat
     5881 tgttaagatg tatgaattta ttagaagtac ctactaaagg tcaagtgatt tttgaaggca
     5941 atgacttaac ggaaaaaggg acacaagtag ataaactacg tcaaaaaatg ggtatggtat
     6001 ttcaaaactt caacctattt ccacataaaa aagttgtcga taatattatt ttagctccta
     6061 aattattaaa gaaagataat aacgatgaat tacataagga agcattgtcg ttattagata
     6121 aagtgggatt aaaagaaaaa gcagatgtat atccgaatca attatcaggt ggtcaaaaac
     6181 aaagggtagc aattgcaaga gctttagcaa tgcatccaga tgttatttta ttcgatgaac
     6241 caacttcagc attagatcct gaggtagttg gtgatgtatt aaaagtaatg aaagacctag
     6301 ccaaagaagg tatgaccatg gtggttgtga cacatgaaat gggatttgcc aaagatgtaa
     6361 gtgacaaagt catatttatg gcagatggcg ttgtcgtaga gtcaggcaca ccagtcgaaa
     6421 tatttgaaca accgcaacat gaaagaacac aaaatttctt agcaagagta ttataacaac
     6481 ctaacgaagc ttgaatatat gatacgcacc acaaagttat atcatatatt caagcttttt
     6541 attattaaaa ttatgtgaaa tgaaacctca atatgaataa tggttgtgtt aaaataacat
     6601 agtattattt tatggggggc atacgattgg atacaaagca attaaagcaa gatatcattg
     6661 actatgcata tacaattggt atcgacagta ttggatttac tactgccgat ccctttgatg
     6721 aattgaagca aaagctagaa gcatatcatg caaatggtta tgcctcagga tttgaagaat
     6781 ctgatattgc tttacgaacg gagcctaaat tatccttacc aacagcaagg tcaatcatag
     6841 caattgcagt tggttatcct aacaaactga aaggtgcacc taagagtgtt agaggtgatc
     6901 gcagaggctt atttgctaga gcatcgtggg gtcaagatta tcatacaatt atgcgtaaac
     6961 gattagacat gttagctgca tttattgaat ctaaagttcc agatgttgaa atcaaatcta
     7021 tggtagatac gggtgtatta tcagataggg cagtagcaga acgtgcaggt ttaggatttg
     7081 ttggtcgtaa tggctttgtc atcaatccta aactaggaac atggacatac ctcggtgaaa
     7141 tgttagtcag tatacctttt gaacctgatg atccattatt agatagctgt ggtgattgta
     7201 caatttgtgt tgatcgttgt ccaacaagtg cattagttgg aaatggccaa ttaaatagtc
     7261 agaaatgcat tagtttttta acgcaaacaa aaggctatat gcctgaccaa tatcgttata
     7321 aaattgggaa tagattatat ggttgcgata cgtgtcaaca agtttgtccg aaaaatagag
     7381 gtattaatac cgaacaagat gacatcattt tggaaccaga aattttaaag ccaagattag
     7441 tacctttact acgtatgtct aataaagaat tcaaacaaac atatggtcac cttgcaggtg
     7501 cttggcgtgg taaaaagccg atacaacgaa atgctatttt agcattggcg cattttaatg
     7561 aagtggatgc aattccagaa ttgaaaaaag ttgcaacaac agatgaaaga ccgttgattc
     7621 gagcaactgc ttattgggcc attggtcaaa ttcttgggga agaagcaaga gattttatca
     7681 atgctaatta tgatcaagag gatgcagaag ttcagaatga aatgataaaa ggattagaca
     7741 caaggagaga atagtaatat gacaaatcat atcgttttat atcaaccaga aatcccagct
     7801 aatactggta acattgcacg tacgtgtgca ggtacaaaca cacatttaca tttaattaaa
     7861 cctcttggat ttagaactga tgataaaatg ttaaaaagag ccggtttaga ttattgggaa
     7921 tttgtgaata ttacgtatca tgatagtatt gaagcatttt ttgaagtcac aaatggcgag
     7981 tattacttat taacaaaatt tggtaaaaag acttatagtg attttgattt ttcaaatcat
     8041 gacaaagatt tttacttcat ttttggaaaa gaaacgacag gattaccaga ctgggtgaaa
     8101 gagaaatatc aagacacagc gttaagaatt cctatgagtg aacatattcg ttcattaaat
     8161 ttatcaaata ctgctgcgtt gttaatttat gaagcgttac gtcaacaaga ttttccggga
     8221 ttgaattaaa atttactcat tttcattata aaaatgatgc ttaagtgcta tatttagagt
     8281 ataagcatgt taaagttaaa tggtttgata tattgaaagt tagggtataa taattattaa
     8341 tatcgccgtt tttatgtaaa atgcaaacta agaggagtgt agaaatcatg gcaatgaact
     8401 ttaaagtctt tgacaatagt caacttgtag cagaatatgc tgctgatatt attagaaagc
     8461 aatttaacaa taatcctact acaattgcag gttttcattt agatacagat caagcgccag
     8521 ttctagatga attaaagaaa aatgttgaaa aacatgctgt tgattttagc caaataaata
     8581 ttttagatta tgacgataaa aaatcatatt tcgaagcgtt aggtgtacca gcaggtcaag
     8641 tttatccaat tgcttatgaa aaagatgcaa tcgaattaat cgctgataag attaaaacta
     8701 aagaaaataa agggaaatta acattacaag ttgtttctat cgatgagcaa ggtaagttaa
     8761 atgttagtat tcgtcaagga ctaatggaag caagagaaat tttcttagta gtgacaggtg
     8821 ctaataaacg agatgtagtt gaaaaattat atcaagaaaa tggtaaaaca agcttcgaac
     8881 cagccgattt aaaagcacat agaatggtaa atgttattct tgataaagaa gcggctgcag
     8941 gtttacctga agatgttaaa gcttacttta cgtcacgctt tgcttaatta aaaatctgtg
     9001 aggtattgat tatgtctaaa gacaaagatc caaaattaaa ttatcatgaa gaagaa
//
LOCUS       DALPQQ010000102         8788 bp    DNA     linear   BCT 22-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus strain K18-6-464
            SAMD00233528-rid16434743.denovo.102, whole genome shotgun sequence.
ACCESSION   DALPQQ010000102 DALPQQ010000000
VERSION     DALPQQ010000102.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMD00233528
            Sequence Read Archive: DRR236061
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 8788)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8788)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001543423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001543423.1
            Genome Coverage       :: 77x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/22/2022 17:09:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,811
            CDSs (total)                      :: 2,743
            Genes (coding)                    :: 2,689
            CDSs (with protein)               :: 2,689
            Genes (RNA)                       :: 68
            rRNAs                             :: 2, 4, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 4, 2 (16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 54
            CDSs (without protein)            :: 54
            Pseudo Genes (ambiguous residues) :: 0 of 54
            Pseudo Genes (frameshifted)       :: 27 of 54
            Pseudo Genes (incomplete)         :: 27 of 54
            Pseudo Genes (internal stop)      :: 10 of 54
            Pseudo Genes (multiple problems)  :: 10 of 54
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8788
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMD00233528-rid16434743.denovo.102"
                     /strain="K18-6-464"
                     /db_xref="taxon:1280"
                     /geo_loc_name="Japan: Niigata"
     gene            complement(238..984)
                     /locus_tag="O7798_002029"
     CDS             complement(238..984)
                     /locus_tag="O7798_002029"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500413.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S9 family peptidase"
                     /protein_id="HDC2864258.1"
                     /translation="MPIEYFTHQFEEITYLSDDLQVKALMMTPHHEVNRIVVYLRGGK
                     GQVGRVRAGRLMQFSDSQTLVIGPYYRGNNGSEGKDEFYRGDLNDVTQLLRLLHDKYP
                     HAFIHMVGFSRGGLQGLLTFQDLPVTSYTIWGGVSDIDLMYEERVDLRGMLRRMIGHP
                     KKDRAAYEARQAIPNINENSPPILIVHGGKDQQVGIHHAYYLADQLELKGATHETFYQ
                     MAEGHVPRPPAMVETLTYIKEFMNQVESHS"
     gene            complement(989..1462)
                     /gene="ytkD"
                     /locus_tag="O7798_002030"
     CDS             complement(989..1462)
                     /gene="ytkD"
                     /locus_tag="O7798_002030"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500414.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleoside triphosphatase YtkD"
                     /protein_id="HDC2864259.1"
                     /translation="MKFRDKDNRQVNLTFKKDNEIADGNHVLAIPTFKNQLLFTKHNL
                     RGIEFPGGKRERGESSAEAVTRELYEETGAKVKNIYYIAQYTIETHDQTDFVKDVYFI
                     EVESLVSKNDYLETAGPVLFNCINDIELAQRSFLLQDSTILKCVERVQSLGFYQT"
     gene            1528..1785
                     /gene="yidD"
                     /locus_tag="O7798_002031"
     CDS             1528..1785
                     /gene="yidD"
                     /locus_tag="O7798_002031"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500415.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="membrane protein insertion efficiency factor
                     YidD"
                     /protein_id="HDC2864260.1"
                     /translation="MKKIFLAMIHFYQRFISPLTPPTCRFYPTCSEYTREAIQYHGAF
                     KGLYLGIRRILKCHPLHKGGFDPVPLKKDKSASKHSHKHNH"
     gene            complement(1782..2783)
                     /gene="menC"
                     /locus_tag="O7798_002032"
     CDS             complement(1782..2783)
                     /gene="menC"
                     /locus_tag="O7798_002032"
                     /EC_number="4.2.1.113"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500416.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="o-succinylbenzoate synthase"
                     /protein_id="HDC2864261.1"
                     /translation="MKLTALHFYKYSEPFKSQIVTPKVTLTHRDCLFIELIDDKGNAY
                     FGECNAFQTDWYDHETIASVKHVIEQWFEDNRNKSFETYEAALKLVDSLENTPAARAT
                     IVMALYQMFHVLPSFSVAYGATASGLSNKQLESLKATKPTRIKLKWTPQIMHQIRVLR
                     ELDFHFQLVIDANESLDRQDFTQLQLLAREQVLYIEEPFKDISMLDEVVDGTIPPIAL
                     DEKATSLLDIINLIELYNVKVVVLKPFRLGGIDKVQTAIDTLKSHGAKVVIGGMYEYG
                     LSRYFTAMLARKGDYPGDVTPAGYYFEQDVVAHSGILKEGRLEFRPPLVDITQLQPY"
     gene            complement(2788..4266)
                     /gene="menE"
                     /locus_tag="O7798_002033"
     CDS             complement(2788..4266)
                     /gene="menE"
                     /locus_tag="O7798_002033"
                     /EC_number="6.2.1.26"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500417.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="o-succinylbenzoate--CoA ligase"
                     /protein_id="HDC2864262.1"
                     /translation="MDFWLYKQAQQNGHHIAITDGQESYTYQNLYCEASLLAKRLKAY
                     QQSRVGLYIDNSIQSIILIHACWLANIEIAMINTRLTPNEMTNQMKSIDVQLIFCTLP
                     LELRGFQIVSLDDIEFAGRDITTNSLLDNTMGIQYETSNETVVPKESPSNILNTSFNL
                     DDIASIMFTSGTTGPQKAVPQTFRNHYASAIGCKESLGFDRDTNWLSVLPIYHISGLS
                     VLLRAVIEGFTVRIVDKFNAEQILTMIKNERITHISLVPQTLNWLMQQGLHEPYNLQK
                     ILLGGAKLSATMIETALQYNLPIYNSFGMTETCSQFLTATPEMLHARPDAVGMPSANV
                     DVKIKNPNKEGHGELMIKGANVMNVYLYPTDLTGTFENGYFNTGDIAEIDHEGYVMIY
                     DRRKDLIISGGENIYPYQIETVAKQFPGISDAVCVGHPDDTWGQVPKLYFVSESDISK
                     AQLIAYLSQHLAKYKVPKHFEKVDTLPYTSTGKLQRNKLYRG"
     gene            complement(4425..4880)
                     /locus_tag="O7798_002034"
     CDS             complement(4425..4880)
                     /locus_tag="O7798_002034"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500418.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4909 domain-containing protein"
                     /protein_id="HDC2864263.1"
                     /translation="MKICLMLYLLIFLSSCSTNNKIVGQRFEIQQHNETIGSIYFSAD
                     YAHIRGIEKGTAKYFIDKVGSKRYLFIEYIPDNVLNCKPDFWKTLKYKKDKVTYYVYL
                     IENLDDEVFHLSALQDMNRIPIDIADDVATMGKSPHQNDRMTLKLNKNN"
     gene            5183..5833
                     /locus_tag="O7798_002035"
     CDS             5183..5833
                     /locus_tag="O7798_002035"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500419.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="excalibur calcium-binding domain-containing
                     protein"
                     /protein_id="HDC2864264.1"
                     /translation="MKITYKYRGDLPLNTENNKNQNQSVKNSERRGMLKGCGGCLISF
                     ILLIILLSACSMMFSNNDNSTNNQSSKTQLTQKDENKNEDKPEEKSETATDEDLQSTE
                     EVPANENTENNQHEIDEITTKDQSDDDINTPNVAEDKSQDDLKDDLKEKQQSSNHHQS
                     TQPKTSPSTETNTQQSFANCKQLRQVYPNGVTADHPAYRPHLDRDKDKRACEPDKY"
     gene            5914..6909
                     /locus_tag="O7798_002036"
     CDS             5914..6909
                     /locus_tag="O7798_002036"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500420.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4352 domain-containing protein"
                     /protein_id="HDC2864265.1"
                     /translation="MSNQFKSEEERRQWEQFQAFQNQQNQQNQQYGQKKSKKGWFWGC
                     GGCLVLFILIIIGISACTAGITGNLGGNSSKETNKTHKIGETVKNGDLEVTVNSVETM
                     KSVGPSLAPTNAKGIFVVADVTIKNKGKEALTIDSSMFKLKSGDKTFEADNTGSMSAN
                     QSDNGSIENSFFLQRINPDSTAQGKIVFDVSENIANAKDKKLEVISSLFSVKKITFDL
                     SDAKKTSKAKKDKQDTEVAVASSNSDNVSYEASATTPATTSSADTDSEDSEKSSKDED
                     KQNASKSDKSSVEKSESNEETAPVEPMPHSKPTTSEAPPSQNIHNEDSMYDASTE"
     gene            6985..7611
                     /locus_tag="O7798_002037"
     CDS             6985..7611
                     /locus_tag="O7798_002037"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500421.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDC2864266.1"
                     /translation="MKFKAIVAITLSLSLLTACGANQHKENSSKSNDTNKKTQQTDNT
                     TQSNTEKQMTPQEAEDIVRNDYKARGVNEYQTLNYKTNLERSNEHEYYVEHLVRDAVG
                     TPLKRCAIVNRHNGTIINIFDDMSEKDKEEFEAFKKRSPKYNPGMNNHDETDGESEDI
                     QHHDIDNNKAIQNDIPDQKVDDKNDKNAVNKEEKHDNGANNSEETKVK"
     gene            7652..7996
                     /locus_tag="O7798_002038"
     CDS             7652..7996
                     /locus_tag="O7798_002038"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500422.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3969 family protein"
                     /protein_id="HDC2864267.1"
                     /translation="MITFENIQQLEKYTLMTMHGLFNQLKLGIISIENAEHTLFTPYM
                     LETLSSLGVKDSIVDLIHKGTELEDFAAFNLSIEDTVTVCLQRTEELLKQYKNVEFND
                     KILINWRIIQEK"
     gene            8094..8645
                     /locus_tag="O7798_002039"
     CDS             8094..8645
                     /locus_tag="O7798_002039"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500423.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDC2864268.1"
                     /translation="MEKNEYIAKYNEYSQLLDATYSQAVAYLLSKYGAVTDDYYKEKS
                     YTRFLNGEIKSISKGKYTRASEGLYCHHISEDKFQNLSDLRFISKFKYSYDVQKKENL
                     VYCDLIEHLILHAIITKESHGQFGVAGLCQMIKPTVIDWYIGEYNPKPAWMQATKARA
                     YLPGILVEKLLIKIDDMLKGIEI"
BASE COUNT         3041 a         1606 c         1383 g         2758 t
ORIGIN      
        1 aaagagccaa ccgttgttat agtctaacaa tggttggctc ctcttatttt atgtgctaaa
       61 aatttatagg caattttatt acaacaatgt acatttaagg tgaccttcat gccaaaatcg
      121 catcactcat ttaatggaag cagcacgtct tcatataaag taccgatccc taattcaacg
      181 catgtagtac cacatcttca aagcttgata gttcccatgc gcacaccacg tttcatacta
      241 gctatgcgac tcaacttggt tcataaactc tttaatataa gtcaatgttt caaccatcgc
      301 tggtggtctt ggcacatgtc cttctgccat ttgataaaat gtttcatgcg tggcaccttt
      361 taactctagt tggtccgcta aataatacgc atgatgaata ccaacttgct ggtctttccc
      421 tccatgtaca attaatattg gcggactgtt ttcattaatg tttggaatcg cttggcgtgc
      481 ctcatatgcc gctcgatctt ttttcggatg accaatcatt cttcgtagca tgcctcttaa
      541 atcgacacgt tcttcataca ttaaatcaat atctgagaca ccaccccaga ttgtataact
      601 tgttactggt aagtcttgaa atgtcaacaa tccttgtaaa ccacctcgcg aaaaaccaac
      661 catgtggata aatgcatgtg gatatttatc atgtagcaac cttaataatt gcgtcacatc
      721 atttaaatcg ccacggtaaa attcgtcttt gccttcactc ccattgttac ctcggtagta
      781 tggcccaatc actaaagttt gactatctga aaattgcatt aatctacctg cgcgcacacg
      841 tcctacttga cctttgccac ctcgcaaata aactacaatg cgatttactt catgatgtgg
      901 tgtcatcatt aaagctttta cttgtaagtc atctgacaaa tatgtaattt cttcgaattg
      961 atgcgtaaaa tattcaattg gcattcgttt acgtttgata aaacccaagt gattgcaccc
     1021 tctctacgca ttttaaaatg gtactatctt gcagtaagaa actccgttgt gcgagttcaa
     1081 tatcattgat acagttaaac aacactggcc ctgctgtttc taaataatcg ttcttgctta
     1141 ccaatgattc aacttcgata aaatatacat cttttacaaa atcagtttga tcatgtgttt
     1201 caatggtata ttgtgctatg taataaatat ttttaacttt ggcgcctgtt tcttcatata
     1261 attcacgtgt aactgcttca gcactacttt ccccgcgttc ccttttacca ccaggaaatt
     1321 caatcccccg taaattatgt ttggtaaaaa gcaattgatt tttaaacgtt ggaatagcta
     1381 gcacatgatt gccatctgct atctcattat cctttttaaa tgtcaaatta acttgacgat
     1441 tatctttatc cctaaacttc acgcgcatca catccctaca ttgtatgtta atataatagt
     1501 taattactat cgttggaggc attaattatg aaaaagatat tcttggcgat gattcatttt
     1561 tatcaacgtt tcatttcgcc actcactcca ccaacttgtc gtttttatcc aacatgttca
     1621 gagtacacta gagaagcgat tcaataccac ggtgctttca aaggccttta tttaggtatc
     1681 cgtcgtattt taaaatgtca tccgcttcat aaaggcggct ttgaccctgt tccgttaaaa
     1741 aaagacaagt cagcaagcaa gcattcacat aaacataacc attaatatgg ttgtaattga
     1801 gttatatcca ctaaaggggg gcgaaattcg agtcgcccct cttttaatat gcctgaatgc
     1861 gccaccacat cttgttcaaa ataataacct gctggtgtaa catctcctgg ataatcacct
     1921 ttacgagcaa gcatcgctgt aaaatagcgg cttaaaccat attcgtacat gccgccaata
     1981 accacttttg caccatgact tttcaaagta tcaattgccg tttgcacttt atcaatgcca
     2041 cctagacgaa atggttttaa tacaacaact ttcacattgt ataattctat caaattaatt
     2101 atgtccaaca acgatgttgc cttttcatca agggctattg gaggtattgt tccatccact
     2161 acttcatcaa gcatggagat atctttaaat ggctcttcga tataaagaac ctgttcacgc
     2221 gctaataact gtaactgtgt gaaatcttga cgatccaagg actcatttgc atctataacc
     2281 aattgaaagt gaaagtctaa ttcccgtaac actctaattt gatgcatgat ttgaggcgtc
     2341 cattttaatt taattctggt cggctttgtt gcttttaatg actctagttg tttatttgat
     2401 aagccgctcg ctgtcgctcc atatgctact gaaaatgaag gcagtacatg aaacatttga
     2461 tacaatgcca tgacaatagt tgcccttgca gcaggcgtat tttccaatga atctactaat
     2521 tttagtgctg cttcatacgt ttcaaatgat ttatttctat tatcttcgaa ccattgctca
     2581 attacatgtt tcactgaggc aattgtttca tgatcatacc aatctgtttg aaaagcgtta
     2641 cattccccga aatatgcatt tcctttgtca tcaatcaatt cgataaacaa acaatcacga
     2701 tgcgttaaag tgactttcgg tgttacaatt tgtgacttaa atggctcact atatttataa
     2761 aaatgcaaag ctgtcaactt catcaaatca tcctctatac aacttatttc tttgtaattt
     2821 acctgttgat gtataaggta aagtatcaac cttttcaaag tgtttcggta ctttatattt
     2881 cgctaaatgt tgtgataaat atgcaatcaa ttgtgccttt gaaatgtcac tttcactgac
     2941 aaaatataat ttaggcactt ggccccaagt atcatcagga tgccctacac atactgcgtc
     3001 actgatacct ggaaattgct tcgctaccgt ttcaatttga tatggataaa tattttcacc
     3061 gccactaata attaaatctt tacgtcggtc ataaatcatg acataacctt catgatctat
     3121 ttcagcaatg tcacccgtat taaaataacc attttcaaac gtacccgtta aatctgttgg
     3181 atacaaatat acattcatca cattggcgcc tttaatcatt aattctccat gaccttcttt
     3241 attaggattt ttaattttta cgtcaacatt ggcacttggc atccctacag cgtcaggacg
     3301 tgcatgcaac atttccggtg ttgctgttaa aaattgcgaa catgtctcag tcataccaaa
     3361 tgaattataa attggcaggt tatattgtaa tgccgtctct atcatagtgg cagataattt
     3421 agcaccgccg agtaatattt tttgtaaatt ataaggttca tgtaaacctt gttgcataag
     3481 ccaatttaaa gtttgtggca caagcgaaat gtgcgtgatt cgttcatttt taatcatcgt
     3541 taaaatttgt tcggcattga atttatcaac aatgcgcaca gtaaaacctt caataacagc
     3601 tcttaaaagt acactgagac ccgaaatatg ataaatcggc aagacagata gccaattagt
     3661 gtcacgatca aatcccaagc tctctttaca tccgattgca ctggcataat gattacgaaa
     3721 cgtttgtggc accgcttttt gagggcccgt tgtccctgat gtaaacataa tcgatgcaat
     3781 gtcatctaaa ttaaatgatg tatttaatat gttggacggc gactctttcg gcaccacagt
     3841 ttcattcgat gtttcatatt ggatacccat tgtgttgtcc aacaaactgt tcgttgtaat
     3901 atcccttcca gcgaattcaa tatcatccag cgatacaatt tgaaaccctc gtaattccag
     3961 tggcaaggta caaaaaatca attgtacatc gattgacttc atctgattcg tcatctcatt
     4021 aggtgtcaac cttgtattaa tcatcgcaat ttcaatattt gccaaccaac atgcatgtat
     4081 taaaatgatc gattgaatcg aattatctat gtatagccca acacgagatt gttgataagc
     4141 cttgagtctt ttagccaata gactcgcttc acagtataaa ttttgataag tataagattc
     4201 ttgaccgtct gttatcgcaa tatgatgtcc attttgttgt gcttgtttat ataaccaaaa
     4261 gtccatgcgt tattcctcca aaatcattta cattataatt ataacgattt tatgacattc
     4321 tagcagtggt tatgtttaaa aatataaaaa agtagacgaa ttgatgcatt gatatgattg
     4381 ttataatgct caatacatat cgttatatca ttcgtctact attatcagtt atttttattt
     4441 aattttagtg tcattctgtc attttgatgt ggtgatttac ccattgttgc cacatcatct
     4501 gcaatgtcaa ttggtatacg gttcatgtct tgtaatgcac ttaaatggaa tacttcatca
     4561 tctaaatttt caatgagata tacataatat gttaccttgt cctttttata ttttaacgtt
     4621 ttccaaaagt ccggcttgca attcaataca ttatccggaa tatattcaat aaataagtaa
     4681 cgtttgctgc ctactttgtc tatgaaatat tttgcagtgc ctttttctat acctcttata
     4741 tgtgcatagt ctgctgaaaa gtaaatacta cctattgttt cattatgttg ttgtatttca
     4801 aatcgttggc ctactatttt attatttgtg ctacaactac ttaaaaaaat cagtagatat
     4861 agcattaaac atattttcat ccccttgaat tttaaaaact ttttcaaaag caacacctct
     4921 aaaaataaat acaatatatt atagcaaata gaaattatta ttttgttaaa ttatgttgtc
     4981 atgttcgtgt cattttgagt cgtaatacaa ctttacaatt attaaattaa caattctaca
     5041 atccaaaaat atttttaaag ttttgaaaaa aattaaagta tttccactac taatttggta
     5101 aaatatgatt atgtgatata gtgaaagcgt tttacactta ataactccct cttaaatgca
     5161 tccaggtttt atgtagtaaa tcatgaaaat aacatataaa tatagaggag atttaccttt
     5221 gaatacagag aacaacaaga atcaaaacca atctgttaaa aattctgaaa gacgcggcat
     5281 gttaaaagga tgcggcggtt gccttatttc ttttatttta ttaataatct tattatcagc
     5341 ctgttcaatg atgtttagta ataatgacaa ttccactaat aatcaatcat caaaaacgca
     5401 attaactcaa aaagatgaaa ataaaaatga agataagcct gaggaaaaat cagaaacagc
     5461 aacagatgag gatttacaat caaccgaaga agtacctgca aatgaaaata ctgaaaataa
     5521 tcaacatgaa attgatgaaa taacaacaaa agatcaatca gacgatgata ttaacacacc
     5581 aaacgttgca gaagataaat cacaagacga cttgaaagat gatttaaaag aaaagcaaca
     5641 atcaagtaac catcatcaat ccacgcaacc taagacctca ccatcaactg aaacaaacac
     5701 gcaacaatca tttgctaatt gtaagcaact tagacaagta tatccgaatg gtgtcactgc
     5761 cgatcatcca gcatatcgac cacatttaga tagagataaa gataaacgtg catgtgaacc
     5821 tgataaatat taaacaacaa gcgaattgaa ttcaaattgt atttagcttt atgcactaat
     5881 cacatagtaa ataatgaggg agatttttta ggcatgagca atcaattcaa aagcgaagaa
     5941 gagcgaagac aatgggaaca attccaagct ttccaaaatc aacaaaacca acagaaccag
     6001 caatacggac aaaagaaatc taaaaaagga tggttctggg gctgtggtgg ttgtctagta
     6061 ttatttattt taattatcat cggtatttca gcttgtacag ctggtattac aggtaacctt
     6121 ggcggaaata gttctaaaga aacgaacaaa acccataaaa tcggtgaaac tgttaaaaat
     6181 ggcgaccttg aagtcactgt aaattcagtg gaaactatga aatctgtagg accatctctt
     6241 gcaccaacaa acgctaaagg tatatttgtc gttgctgatg tgacgattaa aaacaaaggt
     6301 aaagaagcgt taacaattga tagttcaatg tttaagctaa aatccggtga taaaacattt
     6361 gaagcagata atacaggttc aatgtctgct aatcaaagtg acaatggtag tatagaaaat
     6421 tcatttttct tacagcgtat aaatccagat agcactgctc aaggtaaaat tgttttcgat
     6481 gtgtcagaaa acatagccaa cgcaaaagat aaaaaattag aagttatttc tagtttattt
     6541 agcgtcaaga agattacatt tgatttatcc gatgctaaaa aaacatcaaa agctaaaaaa
     6601 gacaagcaag atacagaagt agctgttgcg agttcaaata gcgataatgt aagttatgaa
     6661 gcttcggcta ctacacctgc tacaacttct agtgcggata ctgattctga agatagcgaa
     6721 aagtctagta aagatgagga taagcagaat gcgtctaaaa gtgataaatc tagtgtagaa
     6781 aaaagtgaat ctaatgagga aactgctcct gtagagccca tgccccatag caaacctacc
     6841 actagtgaag caccacctag ccaaaatatt cacaatgaag atagcatgta cgacgcttca
     6901 acagaataaa atttcagggt agctcggcta cccttctttt acggaaaaat taattataca
     6961 taatcaaatc aaggagataa aaaaatgaaa ttcaaagcta tcgttgcaat cacattatca
     7021 ttgtcactat taactgcctg tggtgctaat caacataaag aaaatagtag taaatcaaat
     7081 gacactaata aaaagacgca acaaactgac aacactacac agtcaaatac agaaaagcaa
     7141 atgacaccac aagaagccga agatatagtt cgaaacgatt acaaagcaag aggcgttaat
     7201 gaatatcaaa cattaaatta taaaacaaat cttgaacgaa gcaatgaaca tgaatattat
     7261 gttgaacatc tagtccgcga tgcagttggc acaccattaa aacgttgtgc tattgttaat
     7321 cgacacaatg gcacaattat taatattttt gatgatatgt cagaaaaaga caaagaagaa
     7381 tttgaagcat ttaaaaagag aagccctaaa tacaatccag gtatgaacaa tcatgatgaa
     7441 acagatggtg agtcagaaga cattcaacat catgacattg ataataacaa agcaattcaa
     7501 aatgacatac cagatcaaaa agtcgacgat aaaaatgata aaaatgctgt taataaagaa
     7561 gaaaaacatg ataatggggc aaataattct gaagaaacta aagttaaata atggcatact
     7621 ttgattaatc gtaattttta ggagaaacgc tatgataaca tttgagaata tacaacaact
     7681 tgagaaatac accttaatga ctatgcatgg tctttttaat caacttaaac tcggcattat
     7741 ttcaatcgaa aacgcagagc atacgctttt tacaccttat atgttggaaa cgctctcttc
     7801 cctaggcgtg aaagacagca ttgtcgattt aattcataaa gggactgaat tagaagactt
     7861 tgcggcattt aatttatcaa ttgaagacac agttacagtc tgtttacaaa gaactgaaga
     7921 actattaaaa caatacaaaa atgtggaatt caatgacaaa atattaatca attggcgtat
     7981 tatacaagag aaatagacat ataaaagtcg aatgtaacta cgtgagtatt gattttattc
     8041 tttgtaaatt acaagcattt catattataa agtttgaaaa gaggtatatt gaaatggaga
     8101 aaaatgaata tatagctaaa tataatgaat atagtcaatt attagacgct acatactcgc
     8161 aagctgtagc atacctttta agtaaatatg gcgctgtaac cgatgattat tataaagaaa
     8221 aatcatacac gcgattttta aatggagaaa tcaaaagtat ttcaaaagga aaatacacta
     8281 gagctagcga aggattatat tgccatcata taagcgagga caaattccaa aatctatctg
     8341 atctaagatt catttccaaa tttaagtact catacgacgt tcaaaagaaa gaaaacttag
     8401 tgtactgtga tctaatcgag catttaattt tacatgcaat tattacaaaa gaatcccatg
     8461 gccaatttgg tgtagctgga ttatgtcaaa tgatcaaacc aacagtcatt gattggtaca
     8521 ttggcgaata taatccaaaa ccagcatgga tgcaagccac caaagcacgt gcctatttgc
     8581 ctggaatatt agtagagaaa ttactcatta aaattgacga tatgttaaaa ggaatagaaa
     8641 tataagattt ccttgagtct agataaatga ttaatgtaga tttatttttt gctgttgaga
     8701 ttttgttata gatgtttaaa cctgtaatta aatatatttt ataaaataga ccacgcatac
     8761 ctatctataa acggacaatg tttataaa
//
LOCUS       DALPQQ010000103         8768 bp    DNA     linear   BCT 22-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus strain K18-6-464
            SAMD00233528-rid16434743.denovo.103, whole genome shotgun sequence.
ACCESSION   DALPQQ010000103 DALPQQ010000000
VERSION     DALPQQ010000103.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMD00233528
            Sequence Read Archive: DRR236061
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 8768)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8768)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001543423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001543423.1
            Genome Coverage       :: 77x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/22/2022 17:09:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,811
            CDSs (total)                      :: 2,743
            Genes (coding)                    :: 2,689
            CDSs (with protein)               :: 2,689
            Genes (RNA)                       :: 68
            rRNAs                             :: 2, 4, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 4, 2 (16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 54
            CDSs (without protein)            :: 54
            Pseudo Genes (ambiguous residues) :: 0 of 54
            Pseudo Genes (frameshifted)       :: 27 of 54
            Pseudo Genes (incomplete)         :: 27 of 54
            Pseudo Genes (internal stop)      :: 10 of 54
            Pseudo Genes (multiple problems)  :: 10 of 54
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8768
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMD00233528-rid16434743.denovo.103"
                     /strain="K18-6-464"
                     /db_xref="taxon:1280"
                     /geo_loc_name="Japan: Niigata"
     gene            complement(<1..912)
                     /locus_tag="O7798_002040"
     CDS             complement(<1..912)
                     /locus_tag="O7798_002040"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000390648.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PP2C family protein-serine/threonine
                     phosphatase"
                     /protein_id="HDC2864269.1"
                     /translation="MEEFKQHYKGLIDESLTCQDKVELIKKCEKYTDEVIRKDVLPED
                     IVDIHKNYILTLNLTREDVFKTLDVLQEIVKGFGYSYRDYQRLVDKLQVHDKEIDLAS
                     SLQQTMLKTDIPQFDSIQIGVISVAAQKVSGDYFNLIDHNDGTMSFAVADVIGKGIPA
                     ALAMSMIKFGMDSYGHSQLPSDGLKRLNRVVEKNINQNMFVTMFYGLYEEMNHLLYCS
                     SAGHEPGYIYRAEKEEFEEISVRGRVLGISSQTRYQQQEIPIYLDDLIIILTDGVTEA
                     RNSEGTFIDKQKLLEYIKKHKHMHPQDI"
     gene            complement(1261..1623)
                     /locus_tag="O7798_002041"
     CDS             complement(1261..1623)
                     /locus_tag="O7798_002041"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500782.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system PemK/MazF family
                     toxin"
                     /protein_id="HDC2864270.1"
                     /translation="MIRRGDVYLADLSPVQGSEQGGVRPVVIIQNDTGNKYSPTVIVA
                     AITGRINKAKIPTHVEIEKKKYKLDKDSVILLEQIRTLDKKRLKEKLTYLSDDKMKEV
                     DNALMISLGLNAVAHQKN"
     gene            complement(1620..1790)
                     /gene="mazE"
                     /locus_tag="O7798_002042"
     CDS             complement(1620..1790)
                     /gene="mazE"
                     /locus_tag="O7798_002042"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500783.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system antitoxin MazE"
                     /protein_id="HDC2864271.1"
                     /translation="MLSFSQNRSHSLEQSLKEGYSQMADLNLSLANEAFPIECEACDC
                     NETYLSSNSTNE"
     gene            complement(1875..3023)
                     /gene="alr"
                     /locus_tag="O7798_002043"
     CDS             complement(1875..3023)
                     /gene="alr"
                     /locus_tag="O7798_002043"
                     /EC_number="5.1.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500784.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alanine racemase"
                     /protein_id="HDC2864272.1"
                     /translation="MSDKYYRSAYMNVDLNVVASNFKVFSTLHPNKTVMAVVKANAYG
                     LGSVKVARHLMENGATFFAVATLDEAIELRMHGITAKILVLGVLPAKDIDKAIQHRVA
                     LTVPSKQWLKEAIKNISGEQEKKLWLHIKLDTGMGRLGIKDTKTYQEVIEIIQQYEQL
                     VFEGVFTHFACADEPGDMTTEQYQRFKDMVNEAIKPEYIHCQNSAGSLLMDCQFCNAI
                     RPGISLYGYYPSEYVQQKVKVHLKPSVQLIANVVQTKTLQAGESVSYGATYTATDPTT
                     IALLPIGYADGYLRIMQGSFVNVNGHQCEVIGRVCMDQTIVKVPDQVKAGDSVILIDN
                     HRESPQSVEVVAEKQHTINYEVLCNLSRRLPRIYHDGDQRFVTNELLK"
     gene            complement(3089..3448)
                     /locus_tag="O7798_002044"
     CDS             complement(3089..3448)
                     /locus_tag="O7798_002044"
                     /EC_number="2.7.8.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500785.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="holo-ACP synthase"
                     /protein_id="HDC2864273.1"
                     /translation="MIHGIGVDLIEIDRIQALYSKQPKLVERILTKNEQHKFNNFTHE
                     QRKIEFLAGRFATKEAFSKALGTGLGKHVAFNDIDCYNDELGKPKIDYEGFIVHVSIS
                     HTEHYAMSQVVLEKSAF"
     gene            complement(3452..3943)
                     /locus_tag="O7798_002045"
     CDS             complement(3452..3943)
                     /locus_tag="O7798_002045"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500786.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PH domain-containing protein"
                     /protein_id="HDC2864274.1"
                     /translation="MRDYNFMSPHAKKVMRLSAVLFWIPIALVLLIAFNILNWLFWEI
                     LDNHLSIVSSVIIILLVAVFTLVIAPVYRYKHCRYAFEKHHLRVRNGILFLDEKVIPY
                     FRIQNIDIDVGPIMRRYRLATLTLYTAGGQAEIELIDRSEARRLKRWLNNERHLENNK
                     NEE"
     gene            complement(3930..5513)
                     /locus_tag="O7798_002046"
     CDS             complement(3930..5513)
                     /locus_tag="O7798_002046"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500787.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PH domain-containing protein"
                     /protein_id="HDC2864275.1"
                     /translation="MSEPQKLHPISYFNGIINAIKQNIVVFFIFIIFQLKDFDYTNPE
                     SYLWIGIVFVFFLISYISQIVGIMNTRYWIEDNYFILTTGIFNKKRKELNIKRIQSVD
                     MTQGVVNQIIGGVDLQIKTPSDGIVLSVISKKQGEYLERYIDQLQTELKTEVAQKSSA
                     EKNDNCNHDIEGNVEDIAEGRLDEVQNTDSMLNQKNKRIPIYQMNFKESLFMAMTSGA
                     IGVTLAALVPIYGAVRELIPWSKLNHEISQWVQIVSISVLIIILLVLIVAYIIGTIIT
                     MIRFYGFSVMLENEQLKIEYGLFNKKKVTVPTKRLQAVVERQSYIRRLFGYTAIHFII
                     TSDFENKKIEDDDNDSGSVPILPFIKRDKAYQIIQNLVPDLSYQQVNEGMPLSGFHRH
                     FLIPSIIVIAMAGIGCYFWNQLLLLFTIITIVIIGLFVIKGYLYVKHAGFKMTEEQIT
                     IQNFELLKRNIYYFKAHHIIGFDTWQHTLLKRNNLNNFSFIVAKGVGAQSINLKYARS
                     EDANKLKSWYLRGENDEGL"
     gene            complement(5506..5985)
                     /locus_tag="O7798_002047"
     CDS             complement(5506..5985)
                     /locus_tag="O7798_002047"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500788.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDC2864276.1"
                     /translation="MSDYTKLTKSPKSALLYYYITNGLEFILSVAVYVIFYFIWLRFE
                     WPHYLLYILLVLGALSTLKLFIKPLWQYHCRFYKVDQLSVQYRTSFFIYKEETSRIER
                     LQYLSIKSNPISKVLNLYKVGFMTAGHTIYLPMMSHDDVKIIEERTMSNLRGVESDV"
     gene            complement(6194..6754)
                     /locus_tag="O7798_002048"
     CDS             complement(6194..6754)
                     /locus_tag="O7798_002048"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500789.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="K(+)-transporting ATPase subunit C"
                     /protein_id="HDC2864277.1"
                     /translation="MNTIRNSICLTIITMVLCGFLFPLAITLIGQIFFYQQANGSLIT
                     YDNRIVGSKLIGQHWTETRYFHGRPSAVDYNMNPEKLYKNGVSSGGSNESNGNTELIA
                     RMKHHVKFGNSNVTIDAATSSGSGLDPHITVENALKQAPRIADARHVSTSRVADLIQH
                     RKQRGVLTNDYVNVLELNIALDKMKD"
     gene            complement(6774..>8768)
                     /gene="kdpB"
                     /locus_tag="O7798_002049"
     CDS             complement(6774..>8768)
                     /gene="kdpB"
                     /locus_tag="O7798_002049"
                     /EC_number="7.2.2.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000852430.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="potassium-transporting ATPase subunit KdpB"
                     /protein_id="HDC2864278.1"
                     /translation="IVIEALKMSFYKLNLKQLIKNPIMFVVEVGMILTLILICFPDIF
                     GTSYLSRGYLITIFIILLITILFANFSEAFAEGRGKAQADSLRQAQSNLTARLIEENG
                     AYRIVNATELKAGQNIRVENGETIPADGVVINGLATVDESAITGESAPVIKESGGDFD
                     GVIGGTLVTSDWLEIRVESEAGTSFLDKMIALVEGAERNKTPNEIALFTLLTTLTIIF
                     LVVIVTLYPIASYLHLILPIAMLIALTVCLIPTTIGGLLSAIGIAGMDRVTQFNVLAK
                     SGRAVEVCGDVDVMILDKTGTITYGNRIASEFLPVNQQMLEKLIVAAYMSSIYDDTPE
                     GKSIVRLAKQMYINELPKDIDGTYKPFTAETRMSGIITNEISVFKGAPNSMINLVKQQ
                     QGNIPLNIESLCMDVSSKGGTPLIVIENNVMLGVIYLKDVIKDGLVERFTELRKMGIE
                     TVMCTGDNALTAATIAKEAGVDRFVAECKPEDKIKVIKDEQAKGHIVAMTGDGTNDAP
                     ALAQANIGLAMNSGTISAKEAANLIDLDSNPTKLIEVVKIGKQLLMTRGALTTFSLAN
                     DVAKYFAILPALMMSTIPEMTSLNIMHLSSPKSAIISALIFNALIIVALIPIAMKGVK
                     VKGYSIDRIFINNMLIYGLGGLIVPFLGIKLIDMIVQFFV"
BASE COUNT         2774 a         1708 c         1199 g         3087 t
ORIGIN      
        1 aatatcttgt gggtgcatat gtttatgttt tttaatatat tctaaaagtt tttgtttatc
       61 tataaaggta ccttcactat ttctagcttc agtcacacca tccgttaaaa tgataattaa
      121 atcatcaagg tatattggaa tttcttgttg ttgatatcgt gtttgtgaac tgattcctaa
      181 cactctacct ctaactgaaa tttcttcaaa ttcttctttt tcagcgcgat aaatatatcc
      241 aggctcatga ccagctgaac tacaatacaa taaatggttc atttcttcat ataaaccata
      301 aaacattgtg acgaacatat tttgattaat attcttttca acaacacgat ttaaacgttt
      361 taaaccatca ctcggtaatt gtgagtgtcc ataagaatcc atgccaaact ttatcatact
      421 cattgctaaa gcagctggta taccttttcc aatgacatct gcaacagcaa agctcattgt
      481 gccatcgtta tggtcaatta aattaaaata atctccactt actttttgtg ccgccactga
      541 aataacgcca atttgaatac tatcaaattg tggaatatct gttttaagca ttgtttgttg
      601 taagctagaa gctaagtcta tctctttatc gtgaacttga agtttatcta ccaatctttg
      661 ataatctcga taactataac caaagccttt aacgatttct tgtaagacat ctaatgtctt
      721 gaacacatct tcacgcgtta agtttaacgt caatatatag tttttgtgaa tatcgacaat
      781 gtcttcaggc aagacgtcct tacgaatcac ttcgtcagtg tatttctcac acttttttat
      841 caattctact ttatcttggc acgttaaact ttcatcaatt aaacccttat aatgttgctt
      901 aaattcttcc acgattagtt gcctcctcac ttcccttaca aagcaaatgc ttaagcaagg
      961 ataattatga ttcacttact aacatttatt taattgcact tatcaatttt gtcgtttgca
     1021 attttgctgt agatgatact tttaagctaa aaaaacttta ggatggaata cctaaagcct
     1081 aaaaaactta agacatcctt ttataataaa aaatatgaat atcataactg gtatttgcta
     1141 aaatctttgt ttataagaaa attcttcgta cagaatttag aaatagttat aattattata
     1201 aagttattgt cttttatatc aatattttat ttatctctga aaaatacata taatagacgc
     1261 ctaatttttc tggtgagcta ctgcattcag ccctaaacta atcattagtg cattatctac
     1321 ttctttcatt ttatcatcgg ataagtacgt cagtttttct ttcaatcgtt ttttatcaag
     1381 tgtacgaatt tgttctaata atataactga gtctttatcc aacttatact ttttcttttc
     1441 aatctctaca tgtgtcggta ttttcgcttt attaatccta ccagttattg ccgcaacaat
     1501 aactgtagga ctatatttat taccagtatc attttgaatt atgactacag gtctgactcc
     1561 cccttgttca gatccctgta ctggtgataa atctgctaaa taaacatctc ctcgtctaat
     1621 cattcattcg ttgaattaga agataaatat gtttcgttgc aatcgcatgc ttcacactct
     1681 atcggaaaag cttcgttcgc tagggagaga tttaaatcag ccatttgtga atatccttct
     1741 tttaaagatt gttctaagct atgacttcta ttttgactaa aagataacat atgagaacct
     1801 ccaattgatt ccaaaagtta ttaaatgacc tttaattact ctaatgataa caaattttat
     1861 atgcactgac catattattt taacaattca tttgttacaa aacgttgatc accatcatga
     1921 tagattcgcg gcaaacgtct cgacaagtta caaagcactt cataattaat agtatgttgc
     1981 ttttcagcta ccacctctac cgactgtgga ctttctctat gattatctat taaaatcacc
     2041 gaatctccag ctttaacttg atctggcact ttaacaattg tctgatccat acatacgcga
     2101 ccaataactt cgcattgatg accatttaca tttacaaagc taccttgcat tatgcgtaaa
     2161 tagccatctg catatccaat aggtaacaat gctattgtag ttgggtcagt agctgtataa
     2221 gttgcaccat aacttacaga ctcacccgct tgtagcgtct ttgtttgaac tacattagca
     2281 attaattgca cacttggttt aaggtgtact ttaacttttt gctgtacata ctctgatgga
     2341 taatatccat aaagggaaat tcctggtctt attgcattac agaattggca atccattaat
     2401 agagagcctg ctgagttctg acaatgtata tattcaggtt taattgcttc attgaccata
     2461 tctttaaaac gttgatattg ttcagttgtc atatctcctg gttcgtcagc acaggcaaag
     2521 tgtgtaaaca cgccttcaaa tacaagttgc tcatattgtt gaatgatttc aatcacttct
     2581 tgatacgttt tagtatcttt aatacctaaa cgtcccattc ctgtatctaa tttaatgtgc
     2641 aaccataact ttttctcttg ctcaccagaa atgtttttaa ttgcttcttt caaccactgt
     2701 ttagacggaa ccgttaaggc aactcggtgt tgtatcgctt tatcaatatc tttagctggt
     2761 aacacaccta agactaaaat tttagcagta atcccatgca ttctaagttc tatcgcttca
     2821 tctaacgttg ctacagcaaa aaatgtggcg ccattttcca ttaaatgacg tgctacttta
     2881 acactaccta gtccataggc attggcttta acgacagcca tcactgtttt atttggatgc
     2941 aatgtactga atactttgaa atttgatgca acaacgttta aatctacatt catatacgca
     3001 gatctataat atttatccga catattactt cctcctgtaa ttcccacacg ttttaaaact
     3061 agatcttaat tatcattgta taacaaattt aaaatgctga cttttctaaa acaacttggc
     3121 tcatcgcata atgctcagtg tgtgagatac taacatgtac gataaaccct tcgtaatcaa
     3181 tctttggttt gccaagttcg tcgttgtaac agtctatatc gttaaaagct acatgttttc
     3241 ctaagcctgt gcctaatgct ttactgaacg cttcttttgt agcaaacctg ccagctaaaa
     3301 attcaatttt acgttgctca tgtgtgaaat tgttgaattt gtgctgttca tttttagtta
     3361 aaatccgctc aaccaatttt ggttgcttac tatataacgc ttgtattcga tcgatttcga
     3421 ttaaatctac accaattcca tgtatcattg attattcctc atttttattg ttttctaaat
     3481 gtctctcgtt atttaaccat cgtttcaatc tacgtgcttc acttctatct attaattcaa
     3541 tttcagcttg accacccgct gtataaaggg tcaaagttgc taatcgatag cgtctcatta
     3601 taggaccaac atcgatatca atattttgaa tacgaaaata tggtattacc ttttcatcca
     3661 aaaataaaat gccgtttcgt acacgcaaat ggtgtttttc aaatgcatat ctgcagtgct
     3721 tatatcgata gactggcgct ataacaagcg tgaaaacagc aacaagtaat attataatca
     3781 cactactaac aatggataaa tggttatcta aaatctccca aaatagccag ttcaaaatat
     3841 taaatgcgat taaaagtaca agcgctatgg gtatccaaaa cagcacagca cttaacctca
     3901 tcactttttt agcgtgtggt gacataaaat tataatccct catcattttc acctcttaaa
     3961 taccatgatt tcaatttatt tgcatcttca cttcttgcgt attttaagtt aatcgattgg
     4021 gctcccacac ctttagcaac aataaagcta aaattattta aattgttgcg tttaagtaat
     4081 gtatgttgcc aagtgtcaaa tcctataatg tgatgcgctt taaaataata aatatttcgt
     4141 ttcaatagct cgaaattctg gatagtaatt tgttcttctg tcattttaaa acccgcatgt
     4201 ttgacataaa gatatccttt gatcacaaat aaaccaataa tgactattgt tataatcgta
     4261 aataacaata ataattgatt ccaaaaataa cagcctatac ctgccatagc tatgacaata
     4321 atactaggta ttaaaaagtg tctgtggaaa cctgacaaag gcataccttc attaacttgt
     4381 tgataagata aatctggtac taaattctgg ataatttgat atgctttgtc tcgtttaata
     4441 aacggcaata tcggcacact acctgaatca ttgtcatcat cttcgatttt tttattttca
     4501 aaatcacttg tgatgataaa atgtattgct gtgtagccaa ataatcttcg tatatatgac
     4561 tgacgttcaa caacagcttg caatcgtttc gttggtacag ttactttctt cttgttaaag
     4621 agaccatatt caattttaag ttgctcattt tcaagcatca ccgaaaagcc ataaaatctt
     4681 atcattgtta taatcgttcc aataatatat gccactatta atactagtaa aatgatgatt
     4741 aatactgaaa tacttacaat ttgaacccat tgactaattt catgatttag cttcgaccat
     4801 gggatcaact ctcttacagc cccgtaaatc ggtactaaag ctgctaacgt tacaccaatg
     4861 gcgccactgg tcattgccat aaatagtgat tctttaaaat tcatctgata tataggaatg
     4921 cgtttatttt tctgattaag catactatca gtgttctgca cttcatctaa gcgaccttct
     4981 gcgatgtctt ccacattacc ttcaatgtca tgattacagt tgtcattctt ctcagcacta
     5041 gacttttgcg ccacttctgt cttcaactct gtttgcaatt gatcaatata tcgttcaaga
     5101 tattcacctt gttttttcga aataacactt aagacaatac catcacttgg tgttttgatt
     5161 tgtaaatcca caccaccaat aatttgattg acgacccctt gtgtcatatc aacggactga
     5221 atacgtttta tatttaattc tttacgcttt ttattaaaaa tacctgttgt taaaatgaaa
     5281 taattatcct caatccaata tcgcgtgttc ataattccga caatttgaga aatgtatgat
     5341 attaaaaaga atacaaatac aatacctatc cataaatatg attcgggatt cgtataatca
     5401 aaatctttca attgaaagat aatgaaaata aaaaagacga ctatgttttg tttgatagca
     5461 ttgattatgc cattaaaata tgaaatcgga tgtaattttt gaggttcaga catcactttc
     5521 aacccctctc aaattcgaca tagttctctc ttcgattatt ttaacatcgt catgagacat
     5581 catcggtaaa taaatagtat gacctgcagt cataaatcca actttataca aattaagcac
     5641 tttactaatt ggattagatt taatcgacaa gtattgtaaa cgttcaattc gactcgtttc
     5701 ttctttatat ataaaaaatg atgtacgata ttgtacactt agttgatcaa ctttataaaa
     5761 gcgacaatga tattgccata aaggcttaat aaataatttt aatgtactca gagcacctaa
     5821 aaccaacaaa atataaagta agtaatgtgg ccattcaaat cttaaccata taaaataaaa
     5881 aatgacatac acagctacac tcaatataaa ttctaagcca ttcgtaatgt agtaatacaa
     5941 caatgctgac ttaggactct tagtcaactt agtataatct gacatatacc cctctcccca
     6001 aataaaaaat tatacggatt tataatctat ttcattttat ttttatatga tgataattat
     6061 agcatatgga atatttcatg ctaatttatt cttcctaaag gtacatctaa aaatttaatt
     6121 aagcagaaag tgcttgaatt gctaaaaaga caccatgtta taattttatc aacatgatgc
     6181 ctttcatcta taatcaatct ttcatcttat caagagcgat atttagttca agcacattca
     6241 cataatcatt tgttaacaca ccacgctgct tacgatgttg aatcaagtcg gccactcttg
     6301 aagtagatac atgacgagca tcagcaatac gaggtgcttg cttcaatgca ttttcgaccg
     6361 taatatgcgg atctaagccc gacccagaac ttgttgcagc atctattgtt acatttgaat
     6421 tcccaaattt aacatgatgt ttcatgcgtg ctattaattc ggtgtttcca ttcgattcat
     6481 tacttccacc tgaagatacg ccgtttttat ataatttttc aggattcata ttataatcaa
     6541 ctgcactcgg tctcccgtga aaatatcgtg tctctgtcca gtgctgtcca atcaattttg
     6601 atccaactat acgattgtca tacgtaatta aactgccatt tgcttgttga taaaaaaata
     6661 tttgaccaat taacgtgata gctaacggga ataaaaatcc acataatacc atagttatta
     6721 tcgttaaaca aatactattt cttatcgtat tcatggtaca ggctccttcc tctttacaca
     6781 aaaaattgta caatcatatc tattaattta atgcctaaaa acgggacgat taatccacct
     6841 aatccataaa tcaacatatt atttataaag attctatcaa tgctgtaacc ctttactttt
     6901 acacctttca tggcaattgg aattaaggca acaatgatta atgcattgaa tatcaaagct
     6961 gatataattg cagatttagg tgacgataaa tgcataatat ttagtgaagt catttctgga
     7021 attgttgaca tcattagtgc aggtaaaatt gcaaagtatt ttgctacgtc attagccaaa
     7081 ctaaatgtcg ttaatgcacc tctcgtcatt aataattgtt tgcctatttt tacaacctct
     7141 attaactttg taggattcga atctaaatca attagattag ctgcctcttt agcactaatt
     7201 gtccctgagt tcatagctaa tcctatattc gcttgtgcta gcgcaggtgc atcatttgta
     7261 ccatctcctg tcatcgcaac aatatggcct ttcgcttgtt catctttgat gactttaatt
     7321 ttatcttcgg gtttacactc tgcaacaaat ctatcaaccc cggcttcttt tgcaattgta
     7381 gctgctgtta aagcattatc acctgtacac ataactgttt caatccccat ttttctcaat
     7441 tcagtaaatc gttctacaag accatcttta atcacatctt ttaaataaat cacgccaagc
     7501 atgacattgt tttcaatgac tattaatggt gtgccacctt tactcgatac atccatacag
     7561 agagactcaa tattaagagg aatattgcct tgttgttgtt tgacaagatt tatcatacta
     7621 ttaggtgcac ctttgaatac cgatatttca tttgtaatga ttccgctcat tctagtttca
     7681 gctgtaaaag gcttatatgt gccatcaatg tctttaggca gctcatttat atacatctgc
     7741 ttcgctaatc gtacaatact ttttccttct ggcgtatcat cgtagattga tgacatataa
     7801 gcagcgacta tcaatttttc aagcatttgt tgattcactg gtaaaaattc actagcgatt
     7861 cgattgccat aagtgattgt gcctgtcttg tctaaaatca ttacatcgac atctccacat
     7921 acttctacag cacgcccact tttcgctaat acattgaatt gagtaacacg atccatgcct
     7981 gcaataccaa tcgccgataa caaaccaccg attgtcgttg gtattaaaca tactgttaac
     8041 gcaatgagca tcgcaatagg taaaattaaa tgcaggtaag atgctattgg atataacgtt
     8101 acaataacga ctaaaaatat aattgttaac gttgttaata atgtaaaaag tgcaatttca
     8161 tttggtgttt tatttctttc cgccccttca actaaggcaa tcattttatc taaaaaagat
     8221 gtacccgctt cactctcaac acgtatttct aaccaatcag atgttacaag tgtaccgcca
     8281 atgactccat caaaatcgcc acctgattct tttatcacag gtgcagactc accagtaatt
     8341 gcagattcat caacggttgc taatccattt attacaacgc catcagcagg gattgtttct
     8401 ccattttcta cccgaatatt ttgtccggct tttaactctg tggcgttcac tatccgatac
     8461 gcaccatttt cttctatcaa tcgagcagtt aaatttgatt gtgcttgtct taaactatca
     8521 gcttgcgctt ttccacgacc ttcagcaaag gcttctgaaa aattagcaaa caatatagtt
     8581 attaataata tgataaaaat tgtaatcaaa taacctcgcg atagatagct agttccaaat
     8641 atgtcaggaa aacatattaa tatcaacgtt aaaatcattc caacctcaac gacaaacatt
     8701 atcggatttt ttattaattg tttaagattc agcttataaa aactcatttt caaagcttct
     8761 atcactat
//
LOCUS       DALPQQ010000104         8740 bp    DNA     linear   BCT 22-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus strain K18-6-464
            SAMD00233528-rid16434743.denovo.104, whole genome shotgun sequence.
ACCESSION   DALPQQ010000104 DALPQQ010000000
VERSION     DALPQQ010000104.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMD00233528
            Sequence Read Archive: DRR236061
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 8740)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8740)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001543423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001543423.1
            Genome Coverage       :: 77x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/22/2022 17:09:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,811
            CDSs (total)                      :: 2,743
            Genes (coding)                    :: 2,689
            CDSs (with protein)               :: 2,689
            Genes (RNA)                       :: 68
            rRNAs                             :: 2, 4, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 4, 2 (16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 54
            CDSs (without protein)            :: 54
            Pseudo Genes (ambiguous residues) :: 0 of 54
            Pseudo Genes (frameshifted)       :: 27 of 54
            Pseudo Genes (incomplete)         :: 27 of 54
            Pseudo Genes (internal stop)      :: 10 of 54
            Pseudo Genes (multiple problems)  :: 10 of 54
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8740
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMD00233528-rid16434743.denovo.104"
                     /strain="K18-6-464"
                     /db_xref="taxon:1280"
                     /geo_loc_name="Japan: Niigata"
     gene            86..712
                     /locus_tag="O7798_002050"
     CDS             86..712
                     /locus_tag="O7798_002050"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498686.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HDC2864279.1"
                     /translation="MEKNVEKSFIKIGLYFQIAYIVLMAITLCGFVICYGLIFGLFYL
                     LSGSRADYLIVTIVISAIISIFVIILSIVPVIVLASDLFKERISKGVILIVLAIIALV
                     LCNFVSAILWFVSAISILGRKKLVAAADTTTIQKSKGNANQASHKDTCKKELDSQDMM
                     EHPEVKNPTTKNLEGFNEEIHKDEATTKVVSDNTEPPIESKDHVSKKD"
     gene            924..1700
                     /locus_tag="O7798_002051"
     CDS             924..1700
                     /locus_tag="O7798_002051"
                     /EC_number="1.1.1.304"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498687.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="(S)-acetoin forming diacetyl reductase"
                     /protein_id="HDC2864280.1"
                     /translation="MTNNKVALVTGGAQGIGFKIAERLVEDGFKVAVVDFNEEGAKAA
                     ALKLSSDGTKAIAIKADVSNRDDVFNAVRQTAAQFGDFHVMVNNAGLGPTTPIDTITE
                     EQFKTVYGVNVAGVLWGIQAAHEQFKKFNHGGKIINATSQAGVEGNPGLSLYCSTKFA
                     VRGLTQVAAQDLASEGITVNAFAPGIVQTPMMESIAVATAEEAGKPEAWGWEQFTSQI
                     ALGRVSQPEDVSNVVSFLAGKDSDYITGQTIIVDGGMRFR"
     gene            1844..1966
                     /locus_tag="O7798_002052"
     CDS             1844..1966
                     /locus_tag="O7798_002052"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498688.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDC2864281.1"
                     /translation="MHQLKALLVLTHPRYYKTSQKHHYLIYLNKNSQSYLILFL"
     gene            2037..3017
                     /locus_tag="O7798_002053"
     CDS             2037..3017
                     /locus_tag="O7798_002053"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498689.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent epimerase/dehydratase family
                     protein"
                     /protein_id="HDC2864282.1"
                     /translation="MEDLERVLITGGAGFIGSHLVDDLQQDYDVYVLDNYRTGKRENI
                     KSLADDHVFELDIREYDAVEQIMKTYQFDYVIHLAALVSVAESVEKPILSQEINVVAT
                     LRLLEIIKKYNNHIKRFIFASSAAVYGDLPDLPKSDQSLILPLSPYAIDKYYGERTTL
                     NYCSLYNIPTAVVKFFNVFGPRQDPKSQYSGVISKMFDSFEHNKPFTFFGDGLQTRDF
                     VYVYDVVQSVRLIMEHKDAIGHGYNIGTGTFTNLLEVYRIIGELYGKSVEHEFKEARK
                     GDIKHSYADISNLKALGFVPKYTVETGLKDYFNFEVDNIEEVTAKEVEMS"
     gene            2980..3672
                     /locus_tag="O7798_002054"
     CDS             2980..3672
                     /locus_tag="O7798_002054"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498690.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sugar transferase"
                     /protein_id="HDC2864283.1"
                     /translation="MKKLQLKKWKCRENDIEAVHNNKGYAYQRKLDKLEEVRKSYYPI
                     KRAIDLILSIVLLFLTLPIMVIFAIAIVIDSPGNPIYSQVRVGKMGKLIKIYKLRSMC
                     KNAEKNGAQWADKDDDRITNVGKFIRKTRIDELPQLINVVKGEMSFIGPRPERPEFVE
                     LFSSEVIGFEQRCLVTPGLTGLAQIQGGYDLTPQQKLKYDMKYIHKGSLMMELYISIR
                     TLMVVITGEGSR"
     gene            3882..5048
                     /locus_tag="O7798_002055"
     CDS             3882..5048
                     /locus_tag="O7798_002055"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498691.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 4 protein"
                     /protein_id="HDC2864284.1"
                     /translation="MKIIYCITKADNGGAQTHLIQLANHFCVHNDVYVIVGNHGPMIE
                     QLDARVNVIIIEHLVGPIDFKQDILAVKVLAQLFSKIKPDVIHLHSSKAGTVGRIAKF
                     ISKSKDTRIVFTAHGWAFTEGVKPAKKFLYLVIEKLMSLITDSIICVSDFDKQLALKY
                     RFNRLKLTTIHNGIADVPAVKQTLKSQSHNNIGEVVGMLPNKQDLQINAPTKHQFVMI
                     ARFAYPKLPQNLIAAIEILKLHNSNHAHFTFIGDGPTLNDCQQQVVQAGLENDVTFLG
                     NVINASHLLSQYDTFILISKHEGLPISIIEAMATGLPVIASHVGGISELVADNGICMM
                     NNQPETIAKVLEKYLIDSDYIKMSNQSRKRYLECFTEEKMIKEVEDVYNGKSTQ"
     gene            5029..6267
                     /locus_tag="O7798_002056"
     CDS             5029..6267
                     /locus_tag="O7798_002056"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498692.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="O-antigen ligase family protein"
                     /protein_id="HDC2864285.1"
                     /translation="MENQHNSKLLTLLLIGLAVFIQQSSVIAGVNVSIADFITLLILV
                     YLLFFANHLLKANHFLQFFIILYTYRMIITLCLLFFDDLIFITVKEVLASTVKYAFVV
                     IYFYLGMIIFKLGNSKKVIVTSYIISSVTIGLFCIIAGLNKSPLLMKLLYFDEIRSKG
                     LMNDPNYFAMTQIITLVLAYKYIHNYIFKVLACGILLWSLTTTGSKTAFIILIVLAIY
                     FFIKKLFSRNAVSVVSMSVIMLILLCFTFYNINYYLFQLSDLDALPSLDRMASIFEEG
                     FASLNDSGSERSVVWINAISVIKYTLGFGVGLVDYVHIGSQINGILLVAHNTYLQIFA
                     EWGILFGALFIIFMLYLLFELFRFNISGKNVTAIVVMLTMLIYFLTVSFNNSRYVAFI
                     LGIIVFIVQYEKMERDRNEE"
     gene            6257..7687
                     /locus_tag="O7798_002057"
     CDS             6257..7687
                     /locus_tag="O7798_002057"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498693.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipopolysaccharide biosynthesis protein"
                     /protein_id="HDC2864286.1"
                     /translation="MKSDSLKENIIYQGLYQLIRTMTPLITIPIISRAFGPSGVGIVS
                     FSFNIVQYFLMIASVGVQLYFNRVIAKSVNDKRQLSQQFWDIFVSKLFLALTVFAMYM
                     VVITIFIDDYYLIFLLQGIYIIGAALDISWFYAGTEKFKIPSLSNIVASGIVLSVVVI
                     FVKDQSDLSLYVFTIAIVTVLNQLPLFIYLKRYISFVSVNWIHVWQLFRSSLAYLLPN
                     GQLNLYTSISCVVLGLVGTYQQVGIFSNAFNILTVAIIMINTFDLVMIPRITKMSIQQ
                     SHSLTKTLANNMNIQLILTIPMVFGLIAIMPSFYLWFFGEEFASTVPLMTILAILVLI
                     IPLNMLISRQYLLIVNKIRLYNASITIGAVINLVLCIILIYFYGIYGAAIARLITEFF
                     LLIWRFIDITKINVKLNIVSTIQCVIAAVMMFIVLGVVNHYLPPTMYATLLLIAIGIV
                     VYLLLMMTMKNQYVWQILRHLRHKTI"
     gene            7955..8554
                     /locus_tag="O7798_002058"
     CDS             7955..8554
                     /locus_tag="O7798_002058"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498694.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="superoxide dismutase"
                     /protein_id="HDC2864287.1"
                     /translation="MAFKLPNLPYAYDALEPYIDQRTMEFHHDKHHNTYVTKLNATVE
                     GTELEHQSLADMIANLDKVPEAMRMSVRNNGGGHFNHSLFWEILSPNSEEKGGVIDDI
                     KAQWGTLDEFKNEFANKATTLFGSGWTWLVVNDGKLEIVTTPNQDNPLTEGKTPILLF
                     DVWEHAYYLKYQNKRPDYMTAFWNIVNWKKVDELYQAAK"
BASE COUNT         2989 a         1225 c         1582 g         2944 t
ORIGIN      
        1 caatttgaat ctaaagataa aatcactaaa gaataaagag aatatttaag gtaaagtata
       61 aattttaaat aaatggggaa tagacatgga aaaaaatgta gaaaaatcat tcataaagat
      121 aggtttatat tttcaaatag cttatatagt actcatggct ataactttat gtgggtttgt
      181 aatttgctat ggactaattt tcggcctttt ctatttatta tcaggtagca gagctgatta
      241 tttaatagta acaatagtta tatcggcaat aatttctata tttgtaatta tactttcaat
      301 cgtacctgtc atcgtattgg catctgactt atttaaagaa aggatttcaa aaggtgtcat
      361 attaattgta ttggctatta tcgctttagt attatgcaac tttgtatctg caatactctg
      421 gtttgtttca gccatatcta ttttaggtag aaaaaaatta gtagctgcag cagatactac
      481 cactattcaa aaaagtaaag ggaacgcaaa tcaagcatca cataaagaca cgtgtaaaaa
      541 ggaacttgat agtcaagaca tgatggaaca tcctgaggtt aaaaatccca cgactaaaaa
      601 ccttgaagga tttaacgaag aaatacataa agatgaagct acaactaaag ttgtcagtga
      661 taacacggaa ccgcctattg aatcaaaaga ccatgtctcg aaaaaagatt gatgacaaac
      721 taatcgagag acttaaaaaa ataatattca acataagaac ttttaaaacg acatttaaac
      781 gcattgccaa tcactaatgg tagtgcgttt aactatacct taaatatctg aatattttgt
      841 taaatggagc tacctttgtt gtactattca aatgaagagg agtaaaatgt aattaaagga
      901 aagaaatttg aggagtgatc tttatgacaa acaacaaagt agcattagta actggcggag
      961 cacaagggat tggttttaaa attgcagaac gtttagtgga agatggtttc aaagtagcag
     1021 ttgttgattt caatgaagaa ggggcaaaag cagctgcact taaattatca agtgatggta
     1081 caaaagctat tgctatcaaa gcagatgtat caaaccgtga tgatgtattt aacgcagtaa
     1141 gacaaactgc cgcgcaattt ggcgatttcc atgtcatggt taacaatgcc ggccttggac
     1201 caacaacacc aatcgataca attactgaag aacagtttaa aacagtatat ggcgtgaacg
     1261 ttgcaggtgt gctatggggt attcaagccg cacatgaaca atttaaaaaa ttcaatcatg
     1321 gcggtaaaat tatcaatgca acatctcaag caggcgttga gggtaaccca ggcttgtctt
     1381 tatattgcag tacaaaattc gcagtgcgag gtttaacaca agtagccgca caagatttag
     1441 cgtctgaagg tattactgtg aatgcattcg cacctggtat cgttcaaaca ccaatgatgg
     1501 aaagtatcgc agtggcaaca gccgaagaag caggtaaacc tgaagcatgg ggttgggaac
     1561 aatttacaag tcagattgct ttgggcagag tttctcaacc agaagatgtt tcaaatgtag
     1621 tgagcttctt agctggtaaa gactctgatt acattactgg acaaacaatt attgtagatg
     1681 gtggtatgag attccgttaa taatcatcca ctaatgataa ataaatcctt attgttaagt
     1741 ttaatcactt agcagtaagg attttttagt gcacttagaa gggagtgtat tggtagaaaa
     1801 ttaataagcg aagttcttaa gtgagttatg atgtcacagt ctaatgcatc agttgaaagc
     1861 attattagta ttaacacacc caagatatta taaaacatca caaaaacacc actatctaat
     1921 ttatctcaat aaaaattcac aaagttatct cattttattt ttataaataa aaaaatatcg
     1981 ataaaaagct tacaatactt tatgttttta tgatatattt ttaatgtata aatgaggtgg
     2041 aagatttgga aagagttttg ataactggtg gggctggttt tattgggtcg catttagtag
     2101 atgatttaca acaagattat gatgtttatg ttctagataa ctatagaaca ggtaaacgag
     2161 aaaatattaa aagtttggct gacgatcatg tgtttgaatt agatattcgt gaatatgatg
     2221 cagttgaaca aatcatgaag acatatcaat ttgattatgt tattcattta gcagcattag
     2281 ttagtgttgc tgagtcggtt gagaaaccta tcttatctca agaaataaac gtcgtagcaa
     2341 cattaagatt gttagaaatc attaaaaaat ataataatca tataaaacgt tttatctttg
     2401 cttcgtcagc agctgtttat ggtgatcttc ctgatttgcc taaaagtgat caatcattaa
     2461 tcttaccatt atcaccatat gcaatagata aatattacgg cgaacggacg acattaaatt
     2521 attgttcgtt atataacata ccaacagcgg ttgttaaatt ttttaatgta tttgggccaa
     2581 gacaggatcc taagtcacaa tattcaggtg tgatttcaaa gatgttcgat tcatttgagc
     2641 ataacaagcc atttacattt tttggtgacg gactgcaaac tagagatttt gtatatgtat
     2701 atgatgttgt tcaatctgta cgcttaatta tggaacacaa agatgcaatt ggacacggtt
     2761 ataacattgg tacaggcact tttactaatt tattagaggt ttatcgtatt attggtgaat
     2821 tatatggaaa atcagtcgag catgaattta aagaagcacg aaaaggagat attaagcatt
     2881 cttatgcaga tatttctaac ttaaaggcat taggatttgt tcctaaatat acagtagaaa
     2941 caggtttaaa ggattacttt aattttgagg tagataatat tgaagaagtt acagctaaag
     3001 aagtggaaat gtcgtgaaaa tgacattgaa gctgtccata ataataaggg ttatgcctat
     3061 caaagaaaat tagacaaact agaagaagtg agaaaaagct attacccaat taaacgtgcg
     3121 attgacttaa ttttaagcat tgttttatta tttttaactt taccgattat ggttatattc
     3181 gccattgcta tcgtcataga ttcgccagga aaccctattt atagtcaggt tagagttggg
     3241 aagatgggta aattaattaa aatatacaaa ttacgttcga tgtgcaaaaa cgcagagaaa
     3301 aacggtgcgc aatgggctga taaagatgat gatcgtataa caaatgtcgg gaagtttatt
     3361 cgtaaaacac gcattgatga attaccacaa ctaattaatg ttgttaaagg ggaaatgagt
     3421 tttattggac cacgcccgga acgtccggaa tttgtagaat tatttagttc agaagtgata
     3481 ggtttcgagc aaagatgtct tgttacacca gggttaacag gacttgcgca aattcaaggt
     3541 ggatatgact taacaccgca acaaaaactg aaatatgaca tgaaatatat acataaaggt
     3601 agtttaatga tggaactata tatatcaatt agaacattga tggttgttat tacaggggaa
     3661 ggctcaaggt agtcttaatt tacttaataa gttcaaataa aagttatatt ttaaagattg
     3721 tgaccaattg ttacagtata acgaggaatc ccttgagaca gtatcaaatg gcattaagaa
     3781 atatgtgcca tcattgattt gcatggctat aaatactatt catctgatga gatagccatg
     3841 ttaagaaatt gaaagtatag cattaaaggg gtttgtaaca gttgaaaatt atatattgta
     3901 ttactaaagc agacaatggt ggtgcacaaa cacatctcat tcaactcgcc aaccattttt
     3961 gcgtacacaa tgatgtttat gtcattgtag gcaatcatgg accaatgatt gaacaactag
     4021 atgcaagagt taatgtaatt attatcgaac atttagtagg tccaattgac tttaaacaag
     4081 atattttagc tgtcaaagtg ttagcacagt tattctcgaa aattaaacct gatgttatcc
     4141 atttacattc ttccaaagct ggaacggtcg gacgaattgc gaagttcatt tcgaaatcga
     4201 aagacacacg tatagttttt actgcacatg gatgggcttt tacagagggt gttaaaccag
     4261 ctaaaaaatt tctatattta gttatcgaaa aattaatgtc acttattaca gatagcatta
     4321 tttgtgtttc agatttcgat aaacagttag cgttaaaata tcgatttaat cgattgaaat
     4381 taaccacaat acataatggt attgcagatg ttcccgctgt taagcaaacg ctaaaaagcc
     4441 aatcacataa caatattggc gaagtagttg gaatgttgcc taataaacaa gatttacaga
     4501 ttaatgcccc gacaaagcat caatttgtta tgattgcaag atttgcttat ccaaaattgc
     4561 cacaaaatct aatcgcggca atagagatat tgaaattaca taacagtaat catgcgcatt
     4621 ttacatttat aggcgatgga cctacattaa atgattgtca gcaacaagtt gtacaagctg
     4681 ggttagaaaa tgatgtcaca tttttgggca atgtcattaa tgcgagtcat ttattatcac
     4741 aatacgatac gtttatttta ataagtaagc atgaaggttt gccaattagc attatagaag
     4801 ctatggctac aggtttgcct gttatagcca gtcatgttgg cggtatttca gaattagtag
     4861 ctgataatgg tatatgtatg atgaacaacc aacccgaaac tattgctaaa gtcctggaaa
     4921 aatatttaat agacagtgat tacatcaaaa tgagtaatca atctagaaaa cgttatttag
     4981 aatgttttac tgaggagaaa atgattaaag aagtggaaga cgtttataat ggaaaatcaa
     5041 cacaatagta aattactaac attgttactt atcggtttag cggtttttat tcagcaatct
     5101 tcggttattg ccggtgtgaa tgtttctata gctgacttta tcacattact aatattagtt
     5161 tatttactgt ttttcgctaa ccatttatta aaggcaaatc attttttaca gtttttcatt
     5221 attttgtata catatcgtat gattattacg ctttgtttgc tattttttga tgatttgata
     5281 tttattacgg ttaaggaagt tcttgcatct acagttaaat atgcatttgt agtcatttat
     5341 ttctatttag ggatgatcat ctttaagtta ggtaatagca aaaaagtgat cgttacctct
     5401 tatattataa gcagtgtgac tataggtcta ttttgtatta tagctggttt gaacaagtcc
     5461 cctttactaa tgaaattgtt atattttgat gaaatacgtt caaaaggatt aatgaatgac
     5521 cctaactatt tcgcgatgac acagattatt acattggtac ttgcttacaa gtatattcat
     5581 aattacatat tcaaggtcct tgcatgtggt attttgctat ggtctttaac tacaacgggg
     5641 tctaagactg cgtttatcat attaatcgtc ttagccattt atttctttat taaaaagtta
     5701 tttagtagaa atgcggtaag tgttgtgagt atgtcagtga ttatgctgat attactttgt
     5761 tttacctttt ataatatcaa ctactattta ttccaattaa gcgaccttga tgccttaccg
     5821 tcattagatc gaatggcgtc tatttttgaa gagggctttg catcattaaa tgatagtggg
     5881 tctgagcgaa gtgttgtatg gataaatgcc atttcagtaa ttaaatatac actaggtttt
     5941 ggtgtcggat tagtggatta tgtacatatt ggctcgcaaa ttaatggtat tttacttgtt
     6001 gcccataata catatttgca gatctttgcg gaatggggca ttttattcgg tgcattattt
     6061 atcatattta tgctttattt actgtttgaa ttatttagat ttaacatttc tgggaaaaat
     6121 gtaacagcaa ttgttgtaat gttgacgatg ctgatttact ttttaacagt atcatttaat
     6181 aactcaagat atgtcgcttt tattttagga attatcgtct ttattgttca atatgaaaag
     6241 atggaaaggg atcgtaatga agagtgattc actaaaagaa aatattattt atcaagggct
     6301 ataccaattg attagaacga tgacaccact gattacaata cccattattt cacgtgcatt
     6361 tggtcccagt ggtgtgggta ttgtttcatt ttctttcaat atcgtgcaat actttttgat
     6421 gattgcaagt gttggcgttc agttatattt taatagagtt atcgcgaagt ccgttaacga
     6481 caaacggcaa ttgtcacagc agttttggga tatctttgtc agtaaattat ttttagcgtt
     6541 aacagttttt gcgatgtata tggtcgtaat tactatattt attgatgatt actatcttat
     6601 tttcctacta caaggaatct atattatagg tgcagcactc gatatttcat ggttttatgc
     6661 tggaactgaa aagtttaaaa ttcctagcct cagtaatatt gttgcgtctg gtattgtatt
     6721 aagtgtagtt gttatttttg tcaaagatca atcagattta tcattgtatg tatttactat
     6781 tgctattgtg acggtattaa accaattacc tttgtttatc tatttaaaac gatacattag
     6841 ctttgtttcg gttaattgga tacacgtctg gcaattgttt cgttcgtcat tagcatactt
     6901 attaccaaat ggacagctca acttatatac tagtatttct tgcgttgttc ttggtttagt
     6961 aggtacatac caacaagttg gtatcttttc taacgcattt aatattttaa cggtcgcaat
     7021 cataatgatt aatacatttg atcttgtaat gattccgcgt attaccaaaa tgtctatcca
     7081 gcaatcacat agtttaacta aaacgttagc taataatatg aatattcaat tgatattaac
     7141 aatacctatg gtctttggtt taattgcaat tatgccatca ttttatttat ggttctttgg
     7201 tgaggaattc gcatcaactg tcccattgat gaccatttta gcgatacttg tattaatcat
     7261 tcctttaaat atgttgataa gcaggcaata tttattaata gtgaataaaa taagattata
     7321 taatgcgtca attactattg gtgcagtgat aaacctagta ttatgtatta ttttgatata
     7381 tttttatgga atttacggtg ctgctattgc gcgtttaatt acagagtttt tcttgctcat
     7441 ttggcgattt attgatatta ctaaaatcaa tgtgaagttg aatattgtaa gtacgattca
     7501 atgtgtcatt gctgctgtta tgatgtttat tgtgcttggt gtggtcaatc attatttgcc
     7561 ccctacaatg tacgctacgc tgctattaat tgcgattggt atagtagttt atcttttatt
     7621 aatgatgact atgaaaaatc aatacgtatg gcaaatattg aggcatcttc gacataaaac
     7681 aatttaagta ccggtaatgc tatactttag aaaattaaga ttaagaagaa aaggcaattt
     7741 cttattgaaa aatggaagtt gtctttttta attctcttta aaagcgggaa acaaaagcag
     7801 ttaaatgcct ttttgcattc aatattaaat attatatcaa tttcgaatat ttaaatttta
     7861 tataattgga tataacaaat aaataataat tattgcaaaa cacacccgaa attaattatt
     7921 ataaaagtat attcataaaa ggaggaatat acttatggca tttaaattac caaatttacc
     7981 atatgcatat gatgcattgg aaccatatat agatcaaaga acaatggagt ttcatcacga
     8041 caaacatcac aatacgtacg tgacgaaatt aaacgcaaca gttgaaggaa cagagttaga
     8101 gcatcaatca ctagcggata tgattgctaa cttagacaag gtaccggaag cgatgaggat
     8161 gtcagtccgt aataatggcg gtggtcattt taaccattca ttattctggg aaatactatc
     8221 acctaattct gaagaaaaag gtggcgtaat agatgacatc aaagcgcagt ggggcacttt
     8281 agatgaattt aaaaatgaat ttgcaaataa agcaacaaca ttatttggat caggttggac
     8341 ttggttagtt gttaatgatg gcaaattaga aattgtgaca acgccaaacc aagataatcc
     8401 attaacagaa ggcaaaacac caatcttact atttgatgtt tgggagcatg cctactatct
     8461 gaaatatcaa aataaacgtc cagactatat gactgcattt tggaacattg ttaactggaa
     8521 aaaagttgat gaattatacc aagcagcaaa ataatataac ttaatataat tgaggtggag
     8581 catctacaag gtgttccact tttttgtact taatatcttt acttatttgt ttttgtgtaa
     8641 tgggatagca cgtaaaagtg gaaaaataat aagataaatt tcaactcgaa ataccttatt
     8701 attgttgact ataacgatga cctaaatatt atatacatta
//
LOCUS       DALPQQ010000105         8340 bp    DNA     linear   BCT 22-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus strain K18-6-464
            SAMD00233528-rid16434743.denovo.105, whole genome shotgun sequence.
ACCESSION   DALPQQ010000105 DALPQQ010000000
VERSION     DALPQQ010000105.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMD00233528
            Sequence Read Archive: DRR236061
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 8340)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8340)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001543423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001543423.1
            Genome Coverage       :: 77x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/22/2022 17:09:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,811
            CDSs (total)                      :: 2,743
            Genes (coding)                    :: 2,689
            CDSs (with protein)               :: 2,689
            Genes (RNA)                       :: 68
            rRNAs                             :: 2, 4, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 4, 2 (16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 54
            CDSs (without protein)            :: 54
            Pseudo Genes (ambiguous residues) :: 0 of 54
            Pseudo Genes (frameshifted)       :: 27 of 54
            Pseudo Genes (incomplete)         :: 27 of 54
            Pseudo Genes (internal stop)      :: 10 of 54
            Pseudo Genes (multiple problems)  :: 10 of 54
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8340
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMD00233528-rid16434743.denovo.105"
                     /strain="K18-6-464"
                     /db_xref="taxon:1280"
                     /geo_loc_name="Japan: Niigata"
     gene            183..326
                     /locus_tag="O7798_002059"
     CDS             183..326
                     /locus_tag="O7798_002059"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500452.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="gallidermin/nisin family lantibiotic"
                     /protein_id="HDC2864288.1"
                     /translation="MEKVLDLDVQVKANNNSNDSAGDERITSHSLCTPGCAKTGSFNS
                     FCC"
     gene            391..3384
                     /locus_tag="O7798_002060"
     CDS             391..3384
                     /locus_tag="O7798_002060"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500451.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lantibiotic dehydratase"
                     /protein_id="HDC2864289.1"
                     /translation="MNTIYEPSSICMIRTPLLSVEFFNLFLNTEQIKYSDLQLNAQMK
                     ESILTTTFNLYCTLQEINFDGDNKKVRDAKESLLKYLIRMSTRPTPFGLLSGINLGHF
                     VNEPTRLKVGNSIQKYVKVDGEWLYKLVSYIESIDEYYQNLKVIWNSKAHIINDRIYL
                     NEQSAIYLNNNKDTSFSIKNSELLVFIKTTVTNNNITFSNLAEKINQEFEINDITKVK
                     VYIHNLVSKEIIYSTIRPPLSYSDNLNYILNKLSLHNDDFVKKIREIQKLILAYEKTE
                     IGFGEELYKDIIHHMKALFKCKNYLQIDTKIDMINNYLHQDIATNISEAAYLLWLLSR
                     NNIGFTDLKVLHNRFIEKYGFEQLVNIKDLISDITGFGTTIFQEEETDGNNIVMLKQK
                     FLHALRNNDEIVINEKDVESLINDNEINHYHAPMSADVYAELYLGRFYNQYNELIVIS
                     PLTASFNAGATFGRFHHLIDTETLAKLEHEKGHYYQKMICDDNVEMISINNIPKYPRN
                     HNVLTNHDSYEYSLNLGSSNSYSKYELTLDDIYVGATFNKLYLYSSQLNKRVLFESNN
                     MYNFLKECNLYRLLREISMESVKCIEPMNDVSIDSFSYSPRIRYKNVILKPAYWKINE
                     MVLPLPKNEEWDQQFLKYQEQFNIPNIVNLVYGDNKLLLNLSLANHRYLLMKEYKKHK
                     RVRLVESFLPQSKNDHVYEIVTPIYKKSSYRGPEIEIPKYKNTDIEYDKDWFALHIHI
                     DKPSQDTFIIDNLYPFVKHLKDKGDIDQYFLMRYIKQGDILKLRLFRNDENYAEIYSI
                     LKNWLPHVRQTTEVSDYEFVSYEPEFFRYGGKNTINEIEAFFEYDTNLAVNIIENDFK
                     FDRPYIVAISIMYLFEMFSISNEERMEIVNNYVPTSFKSKDIRPFKNELVTICNPANN
                     FEYMAKHYSGIYRILKDGNQILSKLNEGLKKTLTTKRSRIIGSLIHMRCNRIFGIDKD
                     QETFVLSIVKEIVKTQKHWCGDKND"
     gene            3377..4620
                     /locus_tag="O7798_002061"
                     /pseudo
     CDS             3377..4620
                     /locus_tag="O7798_002061"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500450.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="lanthionine synthetase C family protein"
     gene            4636..5154
                     /locus_tag="O7798_002062"
     CDS             4636..5154
                     /locus_tag="O7798_002062"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500449.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flavoprotein"
                     /protein_id="HDC2864290.1"
                     /translation="MGENVLICLCGSVNSINISHYIIELKSKFDEVNVIASTNGRKFI
                     NGEILKQFCDNYYDEFEDPFLNHVDIANKHDKIIILPATSNTINKIANGICDNLLLTI
                     CHTAFEKLSIFPNMNLRMWENPVTQNNIRLLKDYGVSIYPANISESYELASKTFKKNV
                     VAPEPYKVLEFI"
     gene            5164..6537
                     /locus_tag="O7798_002063"
     CDS             5164..6537
                     /locus_tag="O7798_002063"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500448.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S8 family serine peptidase"
                     /protein_id="HDC2864291.1"
                     /translation="MKIIKRAIISLIILSLLISITMSNASASEELYYSVEYKNTATFN
                     KLVKKKSLNVVYNIPELHVAQIKMTKMHANALANYKNDIKYINATCSTCITSEKTIDR
                     TSNESLFSRQWDMNKITNNGASYDDLPKHANTKIAIIDTGVMKNHDDLKNNFSTDSKN
                     LVPLNGFRGTEPEETGDVHDVNDRKGHGTMVSGQTSANGKLIGVAPNNKFTMYRVFGS
                     KKTELLWVSKAIVQAANDGNQVINISVGSYIILDKNDHQTFRKDEKVEYDALQKAINY
                     AKKKKSIVVAAAGNDGIDVNDKQKLKLQREYQGNGEVKDVPASMDNVVTVGSTDQKSN
                     LSEFSNFGMNYTDIAAPGGSFAYLNQFGVDKWMNEGYMHKENILTTANNGRYIYQAGT
                     SLATPKVSGALALIIDKYHLEKHPDKAIELLYQHGTSKNNKPFSRYGHGELDVYKALN
                     VANQKAS"
     gene            6560..7252
                     /locus_tag="O7798_002064"
     CDS             6560..7252
                     /locus_tag="O7798_002064"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500447.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lantibiotic protection ABC transporter
                     ATP-binding subunit"
                     /protein_id="HDC2864292.1"
                     /translation="MAKLVTENISKRFKNQDVLKHINITLENNEVYGLLGINGAGKTT
                     LMKIICGILQQDSGEIKLDNRPMTRNDLHKVGSLIETPATYNHLSAQDNLKIVCLNES
                     VDFSEINSVLSLVNLNVDKKKKVKDFSLGMKQRLGIAMALIKKPEILVLDEPSNGLDP
                     YGIQELRELLKLLTEQGTSIIISSHILSEIQVLADHIGIIHEGELKYQQRNNKDENLE
                     EIFFKITKGDYK"
     gene            7249..8010
                     /locus_tag="O7798_002065"
     CDS             7249..8010
                     /locus_tag="O7798_002065"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500446.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lantibiotic immunity ABC transporter MutE/EpiE
                     family permease subunit"
                     /protein_id="HDC2864293.1"
                     /translation="MIHLKIEGIKFKNSFSMYVLLISPLVFLCFAIFTVLFAKSNTGT
                     ANSVSPYITLLFNIWPIAFIPIVLCMACNSLFKIEMRNKSFNYYLSNNWSITKEIRAK
                     IFILSIAFLVHCFLVFIIAYIGDLIINPHPVNAMLLLVTILLMYVVSLPLIPLNFLLT
                     RYFGVSVSILINLVLSVICVLFLTLKSLFWVLPWGIMQRIPLITLGILPNGLVVNHNS
                     KYFNDLNALYISIIVSIIIFAIVTFLNNKKSWRLK"
     gene            8007..>8340
                     /locus_tag="O7798_002066"
     CDS             8007..>8340
                     /locus_tag="O7798_002066"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500445.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BsaG protein"
                     /protein_id="HDC2864294.1"
                     /translation="MIINELKSCKLKFSKQALTFVPIIVTILFILFINWYLNVNLWNG
                     RQISLFTASFNAITSLLISINVYQVINFEENIGHFNHILGKANRLNWLNASMIFTYTI
                     TAICILLAS"
BASE COUNT         3167 a         1040 c         1373 g         2760 t
ORIGIN      
        1 aaataaatag taataaaaaa aacacaaaaa tctaattatc aaaatagtat tactaaatta
       61 ataagtgttt acaaaaaatt cacaaaatat aattatataa tttattgatt tgttgtgtga
      121 aaagggataa tatgacaatt gaagtaggcc ttaacttcaa ctaataatag gaggttttat
      181 ctatggaaaa agttcttgat ttagacgtgc aagttaaagc aaacaataac tcaaatgatt
      241 cagcaggtga cgaacgtatt acaagtcata gtttatgtac tcctggttgt gctaagactg
      301 gtagttttaa tagcttctgc tgttaagatt acagcaaata gagcctgaaa gggctctatt
      361 tgtctattca aatatgtgag gtgcttacaa atgaacacta tttacgaacc gtcaagtatt
      421 tgtatgatta gaacaccttt attatcagtt gaatttttca atttattttt aaatactgaa
      481 caaattaaat atagcgactt acaattaaat gctcagatga aagaatcaat cctaacaaca
      541 acatttaact tatattgtac tttacaagaa ataaattttg atggcgataa caagaaggtt
      601 agagatgcta aagaaagttt attaaaatat ttaattagaa tgtcaacacg tccaactcca
      661 tttggattat taagtggtat taatttgggg cattttgtaa atgaaccaac acgtcttaaa
      721 gttggaaata gtattcaaaa atatgtgaaa gtcgatggcg aatggttgta taaactggtt
      781 agttatattg agagtattga tgaatattat caaaatttga aagttatttg gaatagtaaa
      841 gcacatatta tcaatgatcg aatatattta aatgaacaaa gtgctattta tttaaacaac
      901 aataaagata catctttttc cattaaaaat agcgaattac tcgtattcat caaaaccact
      961 gtgacgaata ataatattac tttttcaaat ttagctgaaa agataaatca agaatttgaa
     1021 attaatgata ttactaaagt gaaagtatat atccataatc ttgtctcaaa ggaaattata
     1081 tattcaacaa tcagaccacc gttatcatat agcgataatt taaattatat tttaaataaa
     1141 ctttctttac ataatgatga ttttgtgaaa aaaattagag aaatccagaa attgatatta
     1201 gcttatgaaa aaactgaaat tggatttggc gaggaattat ataaagacat tattcatcat
     1261 atgaaggcac tattcaaatg taaaaactat cttcaaattg ataccaaaat tgacatgatt
     1321 aacaattatt tacatcaaga tatagcaaca aatatatctg aagcagcgta cttattgtgg
     1381 cttttatcaa gaaataatat tggattcaca gatttgaaag ttcttcacaa ccgttttatt
     1441 gaaaagtatg gatttgaaca actcgtgaat attaaagatt tgatttcaga tataacaggt
     1501 ttcgggacaa caatttttca agaagaagaa accgatggaa ataatattgt aatgcttaag
     1561 caaaaatttt tacatgcctt gagaaataac gatgagatag tcataaatga aaaagatgta
     1621 gagtcattga ttaacgataa tgaaatcaat cattatcatg cgccaatgag tgcagatgtt
     1681 tatgctgaac tttatttagg acgtttttac aatcagtaca atgagctcat tgttattagt
     1741 cctttaacgg cgtcttttaa tgctggcgct acatttgggc gatttcatca tttaattgat
     1801 actgaaactt tagcaaaatt agaacatgaa aaaggacatt attatcagaa gatgatatgt
     1861 gatgacaatg tagaaatgat ttctataaat aacataccga aatatccgag aaatcataat
     1921 gtattaacta atcatgactc atacgaatat tcattgaatt taggaagtag taatagttat
     1981 tcaaagtatg agcttacctt agatgatatt tatgttggtg ctacctttaa caaattatat
     2041 ttatattcta gccaactaaa taaaagggta ctatttgaat caaacaatat gtataacttt
     2101 ttaaaagaat gtaatttata tcgattgtta cgagaaattt caatggaatc tgtgaaatgc
     2161 attgaaccta tgaatgatgt gagtattgat tcatttagtt attcaccacg aatcagatat
     2221 aaaaatgtca ttcttaaacc agcatattgg aaaattaacg agatggtatt acctttacct
     2281 aaaaatgaag aatgggatca acaatttttg aaatatcaag aacaattcaa tatacctaat
     2341 atcgtgaatt tagtttatgg agataacaag cttctactaa atttatcatt agctaatcat
     2401 agatatttat tgatgaaaga atataagaag cataaacgtg tacgtttagt agaatcattt
     2461 ttacctcaat caaagaatga tcatgtgtat gaaattgtta caccaattta taaaaaatca
     2521 tcttatcgag gacccgaaat cgaaattcca aaatataaaa atacagatat tgaatatgac
     2581 aaagactggt ttgcattaca tattcatatc gataagccat cgcaagatac atttatcatc
     2641 gacaatttgt atccatttgt aaaacatctt aaagataagg gagatataga tcaatatttt
     2701 ttaatgcgtt atatcaaaca aggtgacatt ttaaagttga ggttattcag gaatgacgaa
     2761 aattacgcag aaatatacag catcttgaag aattggttac cacatgttcg acaaacgaca
     2821 gaagtttcag attatgaatt tgtatcatac gagccagaat tttttagata tggtggaaag
     2881 aacacgatta atgaaataga agccttcttt gaatatgaca cgaatttagc tgtcaatatt
     2941 attgaaaatg attttaagtt tgatcgacca tatattgttg ctatttcaat aatgtattta
     3001 tttgagatgt tttcaatttc taatgaagag cgtatggaaa ttgttaataa ctatgtacct
     3061 acatcattta aaagtaaaga tattagacct tttaaaaatg aacttgtaac tatatgtaat
     3121 cctgctaata attttgaata tatggctaaa cactatagtg gtatttatcg aattttaaaa
     3181 gatggcaacc aaattttgag caaattaaat gaagggctta aaaaaacttt aactactaaa
     3241 aggtcaagga ttattggcag cttaattcat atgcgctgca atcgaatatt tggcattgat
     3301 aaggatcaag aaacatttgt tttatctatt gtaaaagaaa ttgttaaaac tcaaaagcat
     3361 tggtgtggtg acaaaaatga ttgatatgaa tctaatattg aagaagaagt ttcaagagat
     3421 ttcagaagta gatgatttca tttcaaaagc atctactgaa accgattatt ttgaaccttc
     3481 aactttatca catggtatac caggtatcat tttgttttta gatgcttatc aaaaagtttt
     3541 cgatattaat actgagcaaa ttgtgcataa gtacatcatg aaattagcac catatttaca
     3601 gagtggtcaa tataacaatt ctttgtttgg tggactttca ggtattgcat tttcaatgga
     3661 tttagcatcg caaaatggca aaaattatca aaatatttta aataatattg atggtcacat
     3721 tgtaaatgaa atagaaaata aatttgatca aatattacaa gaaccattaa atccattaaa
     3781 ttatgatact gtcagtggat tagctgggat agggagatat ttgctaaata gagtagatga
     3841 gaatgaattt aatgttaaag cattaaaaag catattagta tactttaaag atattcaata
     3901 ttctaaaaat agctggtagt cccacaagaa agtcaatttt tagagtctga taaaaattat
     3961 tttactgaag gtaatatcaa tcttggcctt gcacatggag tgctaggacc gatgtcttta
     4021 tttgcattat gcgtgattaa aggaattacg attgaaaatc atcagcacat attaaaagac
     4081 atgtacaaat ttatcatgga cgaaaaattt tgtaaccacg aaagatggtt gcagcgttac
     4141 gatttaattt ctgaacgtaa tcatttcaat tttattcgga atggttggtg ttatggcaat
     4201 acgggtgtaa tgacgacgtt gtttttaatc ggccaagcat tacaagatga tgaaataatt
     4261 aaaatgtcta aaaaagtgat gctacaagta gtaaatgata aagatgaaaa tttaataagt
     4321 ccaactattt gtcatggatt gtcatcacaa atattaatgt taacaattat gaatttgaat
     4381 tttgaattaa atgaagtgtc tgattatatc actgtattaa taaataaact gatttctcat
     4441 tataaggaag attatctggt gaattttata gacattaatg aaaataagca agatgtattt
     4501 aaaagtagga aagttggcct tttagaaggt gaattagggg tctatctaac attgatgaca
     4561 ctgaaaaata caaaaattct caatgaaaaa aattggacca atgcgttttt aattagctga
     4621 atggaggcgt atatcatggg agaaaatgta ttgatttgtt tgtgtggctc agttaatagt
     4681 atcaatatta gccactatat tattgaatta aaatcaaaat ttgatgaagt aaatgtaatc
     4741 gcgtcaacaa acggtagaaa gtttattaat ggtgaaatat taaagcaatt ttgcgataac
     4801 tattatgacg aatttgaaga ccctttttta aatcatgtag atatagcaaa taaacatgac
     4861 aagattatta ttttacctgc gacttctaat acgattaata aaattgcaaa tggtatatgt
     4921 gacaatttat tattaactat ttgtcataca gcttttgaaa aactttctat atttccaaat
     4981 atgaatttac gaatgtggga aaatccagtt actcaaaata atattcgatt attaaaagat
     5041 tatggtgtat caatatatcc agcaaatatt tcagaaagtt atgaattagc gtcaaaaaca
     5101 tttaaaaaga atgttgtcgc acctgaacca tataaagttc tggaattcat ttgagattag
     5161 aatatgaaaa tcataaagcg cgctattatt agtttaataa tattgagtct tttaatatct
     5221 attacaatga gtaatgcatc agcgtcagaa gaactatatt acagtgttga atacaaaaat
     5281 acagcaacat ttaacaagtt agttaaaaag aagtccttaa acgttgtcta taatataccg
     5341 gaattacatg tggcacagat taaaatgacg aaaatgcatg ctaatgcttt agcaaactat
     5401 aaaaatgata ttaaatatat caatgccaca tgttcaactt gtattactag cgagaaaaca
     5461 atagacagaa catcaaatga gtcattattt tcaagacaat gggatatgaa taaaataacc
     5521 aataatggtg catcgtatga tgatttgcca aaacatgcta acaccaaaat agcaatcata
     5581 gatacaggtg tgatgaaaaa ccatgacgat ttgaaaaata atttctcgac tgattctaaa
     5641 aatttagtac ctttaaacgg ttttagaggt actgaaccgg aggaaacagg tgatgttcac
     5701 gatgtcaatg ataggaaagg acatggcacg atggtgtcgg gtcaaacgag tgctaatggt
     5761 aagttaatag gtgttgcacc gaataacaaa tttacaatgt atcgcgtgtt tggtagtaaa
     5821 aaaacagaac tgctttgggt atcaaaagcg attgttcaag ctgcaaatga tggaaatcaa
     5881 gtcattaata ttagtgttgg tagttatatt attttggaca aaaatgacca tcaaacattt
     5941 agaaaagatg aaaaagtaga atacgatgcg ttacagaaag caatcaatta cgccaagaag
     6001 aaaaaatcta tcgttgttgc tgcagctggt aatgatggta ttgatgtcaa tgacaaacag
     6061 aaactaaaat tacagcgtga atatcaaggt aatggcgaag tgaaagatgt tcctgcatct
     6121 atggacaatg tcgttacagt aggatctaca gatcaaaaga gtaatctatc tgagttttcc
     6181 aattttggta tgaattatac agatattgct gcgcccggag gatcatttgc ttatttaaat
     6241 caattcggtg tggataaatg gatgaatgaa gggtatatgc ataaggagaa cattttaact
     6301 actgccaata acggaagata tatttatcaa gctggaactt cattagccac acctaaagtt
     6361 tcgggagcac tagctttaat cattgataaa tatcatcttg aaaaacatcc agataaagcg
     6421 attgaattgt tatatcagca tgggacatct aagaataata aaccatttag tagatatggg
     6481 catggtgagc ttgatgtgta taaagcatta aatgtagcaa atcaaaaagc aagttaataa
     6541 atcaaaggag tttttgatta tggcaaaatt agttactgaa aacatttcga agcggtttaa
     6601 aaatcaagat gtattaaagc atattaatat cactttagaa aataacgaag tttatggatt
     6661 acttggtatt aatggagccg gtaaaacgac acttatgaaa attatatgtg gcatacttca
     6721 acaagattca ggggaaatta aattagataa tagaccaatg acacgaaatg atttgcacaa
     6781 agttggttcg cttattgaaa cacctgcgac atataatcat ttaagtgcac aagataattt
     6841 gaaaattgtg tgtttaaatg aaagcgttga tttcagcgaa attaatagtg ttttaagctt
     6901 agtcaattta aatgtcgata aaaagaaaaa ggttaaggac ttttctttag gtatgaaaca
     6961 aagacttgga attgcaatgg cattaattaa aaagccagaa attttagtat tagacgaacc
     7021 atctaatggt ttagacccat atggaatcca agaacttaga gaacttctaa aattattaac
     7081 agaacaaggt actagtatta ttatttcaag tcacatttta tctgaaatcc aagttttagc
     7141 agatcatatc ggtattattc atgagggtga gctaaaatat cagcaaagaa ataacaaaga
     7201 tgaaaactta gaagagatat tcttcaaaat aacgaaaggt gattacaaat gatacattta
     7261 aagatagaag gtatcaaatt taaaaattct ttcagtatgt atgttttatt aataagtccg
     7321 ctggtatttc tttgttttgc tattttcaca gtcttattcg ccaaaagtaa tacgggaaca
     7381 gcgaatagtg tgtcaccata tataacttta ctatttaata tttggccaat tgctttcatc
     7441 ccgattgtat tatgtatggc ttgtaattcg ttatttaaaa ttgaaatgag aaataaatca
     7501 tttaattatt acttaagtaa taattggtcg attacaaaag aaataagagc aaagattttc
     7561 attttatcaa tagcattttt ggtacattgc tttttagtat ttattattgc ttatataggt
     7621 gacctaatta ttaatccaca tccggttaat gctatgttgt tattggtgac aatattgttg
     7681 atgtatgtag tatctctacc attgataccg ctcaactttt tattaactcg atactttggt
     7741 gtgtccgtat caatattaat aaacttagta ttatcagtca tttgtgtctt gtttttaaca
     7801 ttgaagagtt tattttgggt gttgccgtgg gggataatgc agagaatccc gcttattacg
     7861 cttggtatac tacctaatgg tttagttgta aaccataatt caaaatactt taatgatctc
     7921 aatgccttat atatttcgat tattgttagc atcattattt tcgcgatagt aacattttta
     7981 aataataaga aaagttggcg attaaaatga taattaacga attaaagtca tgtaagttga
     8041 aattttctaa gcaagcgctc acatttgtac ccattattgt aaccatattg tttatattat
     8101 ttataaattg gtatttaaac gtaaatttat ggaatggtcg acaaataagt ttgtttacag
     8161 cgagttttaa tgcaattaca tcgctattaa tttctataaa cgtctatcaa gttatcaatt
     8221 ttgaagaaaa tattggtcac tttaatcata ttttaggaaa agctaatagg ctaaattggt
     8281 taaatgcatc aatgattttt acttatacta ttacagccat atgtattcta ttagcatcaa
//
LOCUS       DALPQQ010000106         8239 bp    DNA     linear   BCT 22-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus strain K18-6-464
            SAMD00233528-rid16434743.denovo.106, whole genome shotgun sequence.
ACCESSION   DALPQQ010000106 DALPQQ010000000
VERSION     DALPQQ010000106.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMD00233528
            Sequence Read Archive: DRR236061
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 8239)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8239)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001543423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001543423.1
            Genome Coverage       :: 77x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/22/2022 17:09:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,811
            CDSs (total)                      :: 2,743
            Genes (coding)                    :: 2,689
            CDSs (with protein)               :: 2,689
            Genes (RNA)                       :: 68
            rRNAs                             :: 2, 4, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 4, 2 (16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 54
            CDSs (without protein)            :: 54
            Pseudo Genes (ambiguous residues) :: 0 of 54
            Pseudo Genes (frameshifted)       :: 27 of 54
            Pseudo Genes (incomplete)         :: 27 of 54
            Pseudo Genes (internal stop)      :: 10 of 54
            Pseudo Genes (multiple problems)  :: 10 of 54
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8239
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMD00233528-rid16434743.denovo.106"
                     /strain="K18-6-464"
                     /db_xref="taxon:1280"
                     /geo_loc_name="Japan: Niigata"
     gene            complement(359..781)
                     /locus_tag="O7798_002067"
     CDS             complement(359..781)
                     /locus_tag="O7798_002067"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499385.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="organic hydroperoxide resistance protein"
                     /protein_id="HDC2864295.1"
                     /translation="MAIHYETKATNVGGRKGHVYTDDRALDIDIVPPAQADGKATNPE
                     QLFAAGYASCFNGAFDLILKQNKVRDAHPEVTLTVRLEDDSDSESPKLSVSIDATIKN
                     VISQEEAEKYLQMAHEFCPYSKATQGNINVDLNVNVVD"
     gene            929..1645
                     /locus_tag="O7798_002068"
     CDS             929..1645
                     /locus_tag="O7798_002068"
                     /EC_number="4.2.1.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499386.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I 3-dehydroquinate dehydratase"
                     /protein_id="HDC2864296.1"
                     /translation="MTHVEVVATIAPQLSIEETLIQKINHRIDAIDVLELRIDQIENV
                     TVDQVAEMITKLKVMQDSFKLLVTYRTKLQGGYGQFTNDSYLNLISDLANINGIDMID
                     IEWQADIDIEKHQRIITHLQQYNKEVVISHHNFESTPPLDELQFIFFKMQKFNPEYVK
                     LAVMPHNKNDVLNLLQAMSTFSDTMDCKVVGISMSKLGLISRTAQGVFGGALTYGCIG
                     VPQAPGQIDVTDLKAQVTLY"
     gene            1728..2267
                     /locus_tag="O7798_002069"
     CDS             1728..2267
                     /locus_tag="O7798_002069"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499387.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitroreductase"
                     /protein_id="HDC2864297.1"
                     /translation="MELQQAIANRRSVKKFKRDMHIDDALLYQAIEKAADAPNHGMRE
                     PWRVVHVPKDRLGDMSKDISKFAFPNELDKQQCHYDAVTKLGGMLLLILKTDPRQRQN
                     DENYFAFGAYAQNLMLLLYEAGIGTCWKSPLYIYDPKVRKTLGIKKDEVLAGFLYLTD
                     LEEDMPKAPRKNRNLITLY"
     gene            complement(2417..2737)
                     /locus_tag="O7798_002070"
     CDS             complement(2417..2737)
                     /locus_tag="O7798_002070"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499388.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin family protein"
                     /protein_id="HDC2864298.1"
                     /translation="MQSIKSNESFKSVINSDTPVIVKFEAGWCPDCRAMDLWIDPIVE
                     QYNDYQWYTVNRDELEDVVVENEVMGIPSLLVFKNGDKIAHLHSANAKSPEQVESFLA
                     ETFK"
     gene            2881..3237
                     /locus_tag="O7798_002071"
     CDS             2881..3237
                     /locus_tag="O7798_002071"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499389.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arsenate reductase family protein"
                     /protein_id="HDC2864299.1"
                     /translation="MIKFYQYKNCTTCKKAAKFLDEYGVSYEPIDIVQHTPTINEFKT
                     IIANTGVEINKLFNTHGAKYRELDLKNKLQTLSDDEKLELLSSDGMLVKRPLAVMGDK
                     ITLGFKEDQYKETWLA"
     gene            3395..3775
                     /gene="gcvH"
                     /locus_tag="O7798_002072"
     CDS             3395..3775
                     /gene="gcvH"
                     /locus_tag="O7798_002072"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001831963.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycine cleavage system protein GcvH"
                     /protein_id="HDC2864300.1"
                     /translation="MAVPNELKYSKEHEWVKVEGNVAIIGITEYAQSELGDIVFVELP
                     ETDDEINEGDTFGSVESVKTVSELYAPISGKVVEVNEELEDSPEFVNESPYEKAWMVK
                     VEISDESQIEALLTAEKYSEMIGE"
     gene            3954..4832
                     /locus_tag="O7798_002073"
     CDS             3954..4832
                     /locus_tag="O7798_002073"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499392.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1963 domain-containing protein"
                     /protein_id="HDC2864301.1"
                     /translation="MLNIQDVSHLSKKEQKAYNRFVESVENGNLPVLPCIEMDLKEMQ
                     EETLNQSKIGGMPFLKSFKDIPLDENNVPMVLLAQINLDDLPEQQELFPVKEGILQFW
                     ISSEDQMYGMSENLKGNNINSRLVYIKEPITDLSLENIQAHLKSLDADNEDIPFSGAF
                     SIEFRLSKQTITCTDYKYDEDVLALWNKVNPSFALKSMFGGYDELMEPVCNTFTAKEP
                     FNQLGGYPYFDQIDPRTNDQELKMYDRVLLQIDSTRDGNSSIIWGDLGIANILVKSTD
                     LEAMKFDDYMYSWDCS"
     gene            5574..5960
                     /locus_tag="O7798_002074"
     CDS             5574..5960
                     /locus_tag="O7798_002074"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499394.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="toprim domain-containing protein"
                     /protein_id="HDC2864302.1"
                     /translation="MAIVNKVIIVEGKSDKKRVQQVIAEPVNIICTHGTMSIDKLDDM
                     IESLYDKQVFVLADSDDEGDRIRNWFKRYLSESEHIFIDKTYCQVANCPKQYLAHVLS
                     KHGFTCKKETPLLPNINNERLVLVNE"
     gene            5953..6249
                     /locus_tag="O7798_002075"
     CDS             5953..6249
                     /locus_tag="O7798_002075"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499395.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin family protein"
                     /protein_id="HDC2864303.1"
                     /translation="MNNSLDIKDVTTFYEEDKHLIFGYTPTCGTCKVSERMLDIANEI
                     LQLPLLKIDLNFYPQFCKDMQIMSTPILLLMNKDKEVKRIYAFKSVTDLLENLK"
     regulatory      6307..6410
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00162"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="SAM riboswitch class I; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /bound_moiety="S-adenosylmethionine"
                     /db_xref="RFAM:RF00162"
     gene            6499..7524
                     /locus_tag="O7798_002076"
     CDS             6499..7524
                     /locus_tag="O7798_002076"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499396.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methionine ABC transporter ATP-binding protein"
                     /protein_id="HDC2864304.1"
                     /translation="MIELKEVVKEYRTKNKEVLAVDHVNLSIRAGSIYGVIGFSGAGK
                     STLIRMFNHLEAPTSGEVIIDGDHIGQLSKNGLRAKRQKVSMIFQHFNLLWSRTVLKN
                     IMFPLEIAGVPRRRAKQKALELVELVGLKGREKAYPSELSGGQKQRVGIARALANDPT
                     VLLCDEATSALDPQTTDEILDLLLKIREQQNLTIVLITHEMHVIRRICDEVAVMESGK
                     VIEQGPVTQVFENPQHTVTKRFVKDDLNDDFETSLTELEPLEKDAYIVRLVFAGSTTT
                     EPIVSSLSTAYDIKINILEANIKNTKNGTVGFLVLHIPYISSVDFGKFEKELIERQVK
                     MEVLRHG"
     gene            7517..8212
                     /locus_tag="O7798_002077"
     CDS             7517..8212
                     /locus_tag="O7798_002077"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499397.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HDC2864305.1"
                     /translation="MGKSFSEIINEMITMPNIQWPEVWTAIVETLYMTVVSTIFAFIL
                     GLILGVLLFLSAKGKSIGARLFYSIVSFIVNLFRAIPFIILILLLIPFTSLILGTISG
                     PTGALPALIIGAAPFYARLVEIAFKEIDKGVIEAAWSMGANTWTVIRKVLLPEAMPAL
                     VSGITVTAIALVGSTAVAGVIGAGGLGNLAYLTGFTRNQNDVILVSTVFILIIVFIIQ
                     FIGDWLTNKLDKR"
BASE COUNT         2880 a         1135 c         1515 g         2709 t
ORIGIN      
        1 aaaaaaattt cttaattaca tattaaaatg tttattaaaa ttttgcaatc actgatttat
       61 atgcacattc ttgtaaatgg attatcaatt taattatatt tatttttaag ttcaggaaat
      121 tatggaattg gttattggtc gacactggac ttttatttgt agacggtatg cgaagaagtc
      181 aagccagtat tggaaccggt cacatttatg atgactaagg tacaatcatt ttcagttaaa
      241 tattgccaga aatttcaatc acgaatagaa aaaataacca accaaaaatt tttggttggc
      301 aaatttgaat tttatgtgaa ttttattaat aacgttgaat aatctcttta agttaatgct
      361 aatctacaac atttacattt aaatcgacat taatatttcc ttgagtcgct tttgaatatg
      421 gacaaaattc atgagccatt tgtaaatatt tttcagcttc ttcttgagat ataacatttt
      481 taattgtcgc atcaattgaa acacttaatt taggactttc tgagtctgaa tcatcttcta
      541 gtctcactgt tagtgttact tctggatgag catcacgcac tttgttttgc tttaaaatta
      601 ggtcgaaagc accgttgaag caagatgcat aacctgctgc aaataattgt tcggggttag
      661 tagctttacc atctgcttga gcaggcggaa cgatatcaat atctaatgct cgatcatcag
      721 tataaacatg tcctttacgt ccgccaacat tcgtcgcttt agtttcataa tgtattgcca
      781 tacttataac ctcctaattt aaaatacatt tatgctttac ccattcgaaa ataccttaat
      841 cattttcatt tatagcattg tttgattgaa ggataaaaag ttgttgttta caataaaaat
      901 aatgagtatc tgaaatgagg gattcactat gacacatgtg gaagtagtag cgactatcgc
      961 gccacaatta tctatcgaag aaactttaat tcaaaaaatt aatcatcgta ttgatgcaat
     1021 agacgtatta gaattacgaa ttgatcaaat tgaaaatgtc acagttgatc aagtggcaga
     1081 aatgattaca aagctgaagg ttatgcaaga ttcattcaaa ttattagtta cgtatcgtac
     1141 aaagttacaa ggtggctatg ggcaatttac aaatgactcg tatcttaatt taatatcaga
     1201 cttagcaaat atcaatggca tagatatgat tgatatagaa tggcaagcag atattgacat
     1261 tgaaaaacat caacgaatca ttacacattt gcaacagtat aataaagagg tggttatatc
     1321 acatcataat ttcgaaagta cgcctccatt agatgaattg caatttatat tttttaaaat
     1381 gcaaaaattc aacccagaat acgttaaatt agcagtaatg ccacataata aaaatgatgt
     1441 gttaaattta ttgcaggcaa tgtctacatt ttcagatact atggactgca aagttgttgg
     1501 tatttcaatg tctaaacttg gactaataag tagaacggct caaggcgttt ttggtggtgc
     1561 gttgacttat ggttgtatcg gagtaccaca agctccagga cagattgatg ttactgattt
     1621 aaaagcacaa gtgactttat actaataaaa tgaattaggt tgcttttgtg taagtgctgt
     1681 cttataattg agaagtatta tcattgttcg tggaggagcg attttagatg gaattacaac
     1741 aagcaatagc taatagaaga agtgtgaaaa aatttaaaag agatatgcac atagatgacg
     1801 cattgctata tcaagcaatt gagaaagctg ctgatgctcc aaatcacgga atgagggaac
     1861 catggagagt tgtgcatgtt ccgaaagaca gattaggaga tatgagtaag gatatttcta
     1921 aatttgcatt tcctaatgaa ttagataagc aacaatgtca ttatgatgca gttacgaaac
     1981 taggtggcat gttattgctt attttaaaaa cagatccaag acaacgtcaa aatgatgaaa
     2041 actactttgc atttggtgca tatgcacaaa atcttatgtt gttactttat gaagcgggaa
     2101 taggtacatg ttggaaatcg ccattatata tctatgatcc taaagtaaga aaaacacttg
     2161 gtataaagaa agatgaagtt cttgctggat tcttatattt aacggattta gaagaagata
     2221 tgcctaaagc accacgtaaa aatagaaact taattacatt atattaatat gtataattat
     2281 agaaacatta ataaaagctg agtcatgaat tgatggacat ctatcgagtt agagatttaa
     2341 tctaacttac tagagtcggt acaataacag tctcagcttt ttattgtgca gtatatacac
     2401 atttttattt tagtatttat ttaaaagttt ctgctaaaaa tgattcaact tgttcaggtg
     2461 acttagcatt tgctgaatga aggtgtgcaa ttttatcgcc gtttttaaat actagcaagc
     2521 tagggatacc cataacttca ttttcaacaa ctacatcttc taattcatca cgattaacag
     2581 tataccattg gtaatcatta tattgttcta cgattgggtc aatccataaa tccatagcac
     2641 gacagtctgg gcaccatcct gcctcaaatt taacaattac aggtgtatcg ctattaatta
     2701 cagatttaaa tgattcatta cttttgattg attgcattgt aacaactcct ctagatagtt
     2761 taataatttt tattatagct aaatttatat cataataaaa aattttagct tcaaaatgaa
     2821 agccttttgc tttggaaaat gatatattta ttttaaatac ataaaggagg ttgcagtcgt
     2881 atgattaaat tttaccaata taagaattgt acaacttgta aaaaggcagc aaagttttta
     2941 gatgaatatg gcgtaagtta tgaaccaatt gatatcgttc aacatacacc tacaataaat
     3001 gaatttaaaa caataattgc aaatacaggc gtagaaatta ataaattgtt taatacacac
     3061 ggcgcgaaat atcgtgagct tgatttgaaa aataaattac aaactttatc agatgatgaa
     3121 aagttagagt tgttatcatc tgatggtatg ttagtaaagc gtcctctagc agtaatgggc
     3181 gataagataa cattaggatt taaagaagat caatataaag agacttggtt agcgtaagtg
     3241 aaatgtaagc atttactaaa tatctcgata tttagattca ttacatgtaa aatgaaataa
     3301 gctatacaat tgttaatttt tataaatata gttgaatagc atctagcctt atggcatcat
     3361 taatgatgta aagattaatt aggaggggat tctcttggca gtaccaaatg aattgaaata
     3421 ttcaaaagag catgaatggg ttaaagttga aggtaatgta gcaataattg gaatcacaga
     3481 atacgcacaa agcgagttag gtgatattgt tttcgttgaa ttaccagaaa cagatgatga
     3541 aattaatgaa ggggatacgt ttggtagcgt agaatcagtt aaaactgtat cagaattata
     3601 tgcaccaatc tctggtaaag tagttgaagt caacgaagaa ctagaagata gtcccgaatt
     3661 tgtaaatgaa tctccatacg aaaaagcatg gatggtaaaa gtagaaatta gtgatgaaag
     3721 tcagattgaa gctttattaa cagctgaaaa atattcagaa atgattggtg aataatcacc
     3781 gtgtaactcc ttaatctaag attgaggagt ttatttttag tctgagaaaa taaatgatat
     3841 gaaagaaaaa ttattaggta ctattatttg gagtattgct acattttatt attcaagaat
     3901 gatggaaata atgaatttag ctattttaaa aataaaaatt gggggaagtt aatatgctaa
     3961 acattcaaga cgttagtcat ctttctaaaa aggagcaaaa agcatataac cgtttcgtag
     4021 aatctgtaga aaacggtaat ttaccagtac taccatgtat tgaaatggat ctaaaagaga
     4081 tgcaagaaga aacattaaac cagagtaaga ttggtggaat gccattttta aaatctttta
     4141 aagatatacc attagatgaa aataatgtac caatggtatt gctagcacag attaatttgg
     4201 atgatcttcc agaacaacaa gaattatttc ctgtaaaaga agggatattg cagttttgga
     4261 ttagttcaga agatcaaatg tatggaatgt ctgaaaattt aaagggaaac aatataaact
     4321 caaggcttgt ttatataaaa gagccaatta cagatttatc actcgaaaat attcaagcgc
     4381 atttgaagtc attagatgct gataatgagg atatcccgtt cagtggagca ttttctatag
     4441 aatttagatt gtcgaaacaa actattacat gtactgatta taagtacgat gaggacgtgc
     4501 ttgcattgtg gaataaagtc aatccatcct tcgcgctaaa atcaatgttt ggtggttatg
     4561 atgaattgat ggaacctgtg tgtaacacat ttactgctaa ggaaccattt aatcaacttg
     4621 gtggttatcc atattttgac caaatagatc caagaacgaa cgatcaagaa ctgaaaatgt
     4681 atgatagagt cttactgcaa attgattcta caagagatgg taattcttcg attatatggg
     4741 gtgatttagg tattgccaat atcttagtga aatctactga ccttgaggct atgaagtttg
     4801 atgattacat gtattcatgg gattgcagct aagagaatca taaaaatata ttactttaat
     4861 aagtgtagta tctatagatc aatctaggga gtgggacata aatgatattt tcgcaaaatt
     4921 tatttcgtcg tcccacccca acttgcattg tctgtagaaa ttgggaatcc aatttctctt
     4981 tgttggggcc catccccaac ttgcattgcc tgtagaattt cttttcgaaa ttctctgtgt
     5041 tggggcccct gactagaatt gaaaaaagct tgttacaagc gcattttcgt tcagtcaact
     5101 actgccaata taacttcgta gagcatagaa cattgattta tgtcccagcc tgttttcata
     5161 agccacagct aatgtgtatt taaaaatagg aatacatgag taaaactcat gcataagaaa
     5221 tactaatttc taaagaaaaa gtatttcttt atgttggggc cccgccaact tgcacattat
     5281 tgtaagctga cttaccatca gcttctgtgt tggggccccg ctataattga aaagtttgtt
     5341 ataggtgtat tttcttttgg ttaactattg ttaatataac attgtagatt ttaggatgtt
     5401 gatttttgac ttagcctttg tctgcttatg ttaaatgttc cagctagtca aacattgagt
     5461 ttgtaattat tatattaagc tagtttaaat tttttgtgat ttatgtttta ttcataccaa
     5521 ttttgtgaaa tgatacagtg acagatgttt attgatttta aagggtgatg atgatggcta
     5581 ttgtaaataa agtgataatt gttgaaggaa aatctgataa aaaaagggtg caacaggtta
     5641 ttgcagaacc agtcaatatt atttgtactc atggaacaat gagtatagat aagcttgatg
     5701 atatgataga atcactgtat gataaacaag tttttgtatt agccgattct gatgacgaag
     5761 gagatcgaat tagaaattgg tttaaacgtt atttgagtga aagtgaacat atatttattg
     5821 ataaaactta ctgtcaagtt gcgaattgcc ccaaacaata tttggcgcat gtactttcaa
     5881 aacatggctt tacttgtaag aaagaaacac ctcttttacc gaatataaat aatgaaaggt
     5941 tagttttagt aaatgaataa ttcattagac atcaaagatg taactacatt ttatgaggaa
     6001 gacaaacatt taatctttgg ttatacacca acgtgtggta cttgtaaggt ttcagaaaga
     6061 atgttagaca ttgctaatga aatattgcag ttaccattat tgaaaataga tttaaacttt
     6121 tatcctcagt tttgtaaaga tatgcaaatc atgtctacgc cgattttatt gttgatgaat
     6181 aaagataaag aagtaaaacg aatttatgca tttaaatcgg tgactgattt gttagaaaat
     6241 ttaaaatagt tattgacgaa attttactaa ggtgttagga ttaatacaaa ttaaatgatg
     6301 cgtaaactct tatcgagagt ggtggaggga tgtgccctac gaagcccggc aaccgtctta
     6361 tatagaaatg gtgccaattc acataaagtt ttaacttttg aagatgagaa aaacaatact
     6421 actattgctt tctcaatttt tctatcgata ttgagaaagc attttttatt ttattaagca
     6481 acacagggag gaatcaacgt gattgaatta aaagaagttg ttaaagaata tcggactaaa
     6541 aataaagaag tccttgctgt agatcacgtt aatttatcga ttcgagcagg atcgatttat
     6601 ggcgtcattg gtttttctgg agcaggaaaa agtactttga ttcgaatgtt taatcattta
     6661 gaagcgccta catcaggtga agttattata gatggagacc atataggtca attgtccaaa
     6721 aatggattaa gagcaaaaag acaaaaagta agtatgatct tccaacattt taatttgtta
     6781 tggtcaagga ctgtgttaaa aaatattatg tttccgcttg aaattgcagg tgtccctaga
     6841 aggagagcta agcaaaaagc attagaactt gtcgaactcg tcggtttaaa aggtagagaa
     6901 aaggcttatc catcagagtt atcaggtgga caaaagcaac gtgttgggat tgcacgagcg
     6961 ttagctaatg atccaacggt cttgctttgt gatgaggcaa caagtgcact tgatccgcaa
     7021 acaacagatg aaattttaga tctactacta aaaattagag aacaacaaaa tttaacaatt
     7081 gtactaatta cgcatgaaat gcatgtcatt cgtcgtattt gtgatgaagt tgcagttatg
     7141 gaaagtggta aagtgataga acaaggaccg gtgacacagg tttttgaaaa tccgcaacac
     7201 actgtgacaa aacgatttgt gaaagacgat ttaaatgatg atttcgaaac atctttaaca
     7261 gaattagagc cattagaaaa agatgcatat atcgttagat tagttttcgc tggttcaaca
     7321 acaaccgagc ctattgtatc gagtctatca actgcctatg atattaaaat taatatttta
     7381 gaagcaaata ttaaaaatac aaaaaatgga acagtcggct ttttagttct gcatattcca
     7441 tatatttcaa gtgtagattt cggaaaattc gaaaaagagt taattgagcg acaagttaaa
     7501 atggaggtgt taagacatgg gtaaatcatt tagtgaaatt ataaatgaaa tgattacaat
     7561 gcctaatatt cagtggccag aagtttggac tgcaatagtc gaaacactat acatgacagt
     7621 cgtctcaact atatttgcat ttatacttgg tcttatttta ggtgtgttat tattcttgtc
     7681 tgctaaaggt aagtctatcg gtgcaaggtt attttattct atcgtttctt tcattgttaa
     7741 cttatttaga gcgataccat ttattatttt aattttatta ttaattccat ttacaagttt
     7801 gatacttgga acgataagtg gtccgacagg tgcgttacca gccttgatca ttggcgcagc
     7861 accgttttat gcaaggctcg tagaaattgc ttttaaagaa attgataaag gtgtcatcga
     7921 agcggcttgg tcaatgggcg ctaatacttg gacagtaatt cgtaaagtcc ttttacctga
     7981 agctatgcca gcgctagtgt ctggcattac agttacagca atcgctttag ttggttcaac
     8041 agcagttgca ggtgtaattg gtgccggtgg tttaggaaat ttagcatact taacaggttt
     8101 cactcgaaat caaaatgatg tcattttagt atcaacagtt tttattttaa ttattgtatt
     8161 tataatccaa ttcattgggg attggcttac aaataaactt gataaacgat aaattggggg
     8221 tttcatttta tgaaaaaat
//
LOCUS       DALPQQ010000107         8121 bp    DNA     linear   BCT 22-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus strain K18-6-464
            SAMD00233528-rid16434743.denovo.107, whole genome shotgun sequence.
ACCESSION   DALPQQ010000107 DALPQQ010000000
VERSION     DALPQQ010000107.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMD00233528
            Sequence Read Archive: DRR236061
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 8121)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8121)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001543423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001543423.1
            Genome Coverage       :: 77x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/22/2022 17:09:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,811
            CDSs (total)                      :: 2,743
            Genes (coding)                    :: 2,689
            CDSs (with protein)               :: 2,689
            Genes (RNA)                       :: 68
            rRNAs                             :: 2, 4, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 4, 2 (16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 54
            CDSs (without protein)            :: 54
            Pseudo Genes (ambiguous residues) :: 0 of 54
            Pseudo Genes (frameshifted)       :: 27 of 54
            Pseudo Genes (incomplete)         :: 27 of 54
            Pseudo Genes (internal stop)      :: 10 of 54
            Pseudo Genes (multiple problems)  :: 10 of 54
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8121
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMD00233528-rid16434743.denovo.107"
                     /strain="K18-6-464"
                     /db_xref="taxon:1280"
                     /geo_loc_name="Japan: Niigata"
     gene            complement(<1..662)
                     /locus_tag="O7798_002078"
     CDS             complement(<1..662)
                     /locus_tag="O7798_002078"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499679.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YjjG family noncanonical pyrimidine
                     nucleotidase"
                     /protein_id="HDC2864306.1"
                     /translation="MGKLGYKNILIDFDDTIVDFYDAEEWAFHYMANVFNHKATKDDF
                     LTFKKINHQHWEAFQQNKLTKSEVLSERFVNYFKHHQMEVDGHRADVLFRNGLAEAKV
                     KYFDQTLETIVELSKRHDLYIVTNGVTETQKRRLNQTPLHKYIKKIFISEETGYQKPN
                     PEFFNYVFNDIGEDERQHSIIVGDSLTSDILGGINAGIATCWFNFRGFDHNPGIIPDY
                     EI"
     gene            complement(786..920)
                     /locus_tag="O7798_002079"
     CDS             complement(786..920)
                     /locus_tag="O7798_002079"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499678.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="beta-class phenol-soluble modulin"
                     /protein_id="HDC2864307.1"
                     /translation="MTGLAEAIANTVQAAQQHDSVKLGTSIVDIVANGVGLLGKLFGF
                     "
     gene            complement(977..1111)
                     /locus_tag="O7798_002080"
     CDS             complement(977..1111)
                     /locus_tag="O7798_002080"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499677.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="beta-class phenol-soluble modulin"
                     /protein_id="HDC2864308.1"
                     /translation="MEGLFNAIKDTVTAAINNDGAKLGTSIVSIVENGVGLLGKLFGF
                     "
     gene            1475..1548
                     /locus_tag="O7798_002081"
     tRNA            1475..1548
                     /locus_tag="O7798_002081"
                     /product="tRNA-Arg"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:1509..1511,aa:Arg,seq:tct)
     gene            complement(2023..2211)
                     /locus_tag="O7798_002082"
     CDS             complement(2023..2211)
                     /locus_tag="O7798_002082"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499676.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding protein"
                     /protein_id="HDC2864309.1"
                     /translation="MRNQIQKLLDSDLSSLHISKQTGVPQSTIHRMRKNERSLDNMSL
                     KNAELLYKFANSIFSNEN"
     gene            2460..3407
                     /locus_tag="O7798_002083"
     CDS             2460..3407
                     /locus_tag="O7798_002083"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499675.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TDT family transporter"
                     /protein_id="HDC2864310.1"
                     /translation="MRLQKAPLVTSGLVLGLLGLGNLLKDLSLTLNAVCGIFAFLIWI
                     HLLCTMIKYFNNVKEQLNSPLVSSVFTTFFMSGFLGTTYLNTFFSNITFINSLITPIW
                     ILCLVGIMTHMIIFSIKYLKDFSLENVYPSWTVLFIGIAIAGLTAPVSGYFFIGQLTV
                     IYGFVATCIVLPIVFKRLKAFPLQTSIKPNTSTICAPFSLVAAAYVIAFPKANAFIVI
                     IFLLLAQIFYFYIIIQLPKLLKEPFSPVFSAFTFPLVISATALKNSLPVLMFPDIWKG
                     LLFIEVLLATVIVLRVFIGYLHFFLKKEKQDKFLRNASQ"
     gene            complement(3712..3939)
                     /locus_tag="O7798_002084"
     CDS             complement(3712..3939)
                     /locus_tag="O7798_002084"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499674.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDC2864311.1"
                     /translation="MTHLTKVLDTLTGICVVLLFSKYFVAYANMVFDWNLRWYLLENI
                     PHLPIILFILMFIFGVPSEMIKDRQRKNNGV"
     gene            complement(4247..5803)
                     /locus_tag="O7798_002085"
     CDS             complement(4247..5803)
                     /locus_tag="O7798_002085"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000428224.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YfcC family protein"
                     /protein_id="HDC2864312.1"
                     /translation="MENTINESEKKKRFKLKMPGAFMILFILTVVAVIATWVIPAGAY
                     SKLSYEPSSQELKIVNPHNQVKKVPGTQQELDKMGVKIKIEQFKSGAINKPVSIPNTY
                     ERLKQHPAGPEQITSSMVEGTIEAVDIMVFILVLGGLIGVVQASGSFESGLLALTKKT
                     KGHEFMLIVFVSILMIIGGTLCGIEEEAVAFYPILVPIFIALGYDSIVSVGAIFLASS
                     VGSTFSTINPFSVVIASNAAGTTFTDGLYWRIGACIVGAIFVISYLYWYCKKIKNDPK
                     ASYSYEDKDAFEQQWSVLKDDDSAHFTLRKKIILTLFVLPFPIMVWGVMTQGWWFPVM
                     ASAFLIFTIIIMFIAGTGKSGLGEKGTVDAFVNGASSLVGVSLIIGLARGINLVLNEG
                     MISDTILHFSSSLVQHMSGPLFIIVLLFIFFCLGFIVPSSSGLAVLSMPIFAPLADTV
                     GIPRFVIVTTYQFGQYAMLFLAPTGLVMATLQMLNMRYSHWFRFVWPVVAFVLIFGGG
                     VLITQVLIYS"
     gene            complement(5975..6907)
                     /gene="arcC"
                     /locus_tag="O7798_002086"
     CDS             complement(5975..6907)
                     /gene="arcC"
                     /locus_tag="O7798_002086"
                     /EC_number="2.7.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499672.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbamate kinase"
                     /protein_id="HDC2864313.1"
                     /translation="MAKIVVALGGNALGKSPQEQLELVKNTAKSLVGLITKGHEIVIS
                     HGNGPQVGSINLGLNYAAEHNQGPAFPFAECGAMSQAYIGYQLQESLQNELHSIGMDK
                     QVVTLVTQVEVDENDPAFNNPSKPIGLFYNKEEAEQIQKEKGFIFVEDAGRGYRRVVP
                     SPQPISIIELESIKTLIKNDTLVIAAGGGGIPVIREQHDGFKGIDAVIDKDKTSALLG
                     ANIQCDQLIILTAIDYVYINFNTENQQPLKTTNVDELKRYIDENQFAKGSMLPKIEAA
                     ISFIENNPKGSVLITSLNELDAALEGKVGTVIKK"
     gene            complement(6930..7931)
                     /gene="argF"
                     /locus_tag="O7798_002087"
     CDS             complement(6930..7931)
                     /gene="argF"
                     /locus_tag="O7798_002087"
                     /EC_number="2.1.3.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499671.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ornithine carbamoyltransferase"
                     /protein_id="HDC2864314.1"
                     /translation="MKNLRNRSFLTLLDFSRQEVEFLLTLSEDLKRAKYIGTEKPMLK
                     NKNIALLFEKDSTRTRCAFEVAAHDQGANVTYLGPTGSQMGKKETTKDTARVLGGMYD
                     GIEYRGFSQRTVETLAEYSGVPVWNGLTDEDHPTQVLADFLTAKEVLKKDYADINFTY
                     VGDGRNNVANALMQGAAIMGMNFHLVCPKELNPTDELLNRCKNIAAENGGNILITDDI
                     DQGVKGSDVIYTDVWVSMGEPDEVWKERLELLKPYQVNKEIMDKTGNPNVIFEHCLPS
                     FHNADTKIGQQIFEKYGIREMEVTDEVFESKASVVFQEAENRMHTIKAVMVATLGEF"
BASE COUNT         2637 a         1502 c         1082 g         2900 t
ORIGIN      
        1 ttaatttcat aatcaggtat aattcctgga ttatgatcaa atcctctaaa attaaaccag
       61 caagtagcta tacccgcatt gattccacct agaatgtcag atgttaaaga atctccaact
      121 ataatcgagt gctgtctttc atcctcacca atatcattaa aaacataatt aaaaaattcc
      181 ggattaggtt tttgatatcc tgtttcttca gatataaata tctttttaat atatttatgc
      241 aacggcgtct gatttaacct tctcttttgc gtttcggtta caccattagt aacaatatat
      301 aaatcatgtc ttttcgataa ttcgacaatt gtttctaatg tttgatcaaa gtatttaact
      361 ttagcttctg ctaatccatt tctaaataac acatctgcac gatgcccatc aacttccatt
      421 tgatgatgtt tgaagtaatt cacaaatcgt tctgataata cttcagactt cgttaattta
      481 ttttgttgaa aagcttccca atgttggtga ttgatttttt taaatgttaa aaaatcatcc
      541 tttgttgctt tatgattaaa aacattcgcc atatagtgaa acgcccattc ttctgcatca
      601 taaaaatcaa caattgtatc atcaaagtct atcaaaatat ttttatatcc caatttcccc
      661 atctcctgta ttgtctatgt atctaaatct taacagaggc tcaaatttct gcaaataaaa
      721 taaactgagt gcataacatt aaagtatgct cacccagttt attttaaaga atattagtta
      781 ttatattaga atccaaataa tttacctagt aaacccacac cgttagcaac gatgtctacg
      841 atacttgtgc ctaatttcac actatcatgt tgttgtgcag cttgcacagt atttgcgatt
      901 gcttctgcta gtccagtcat ttaaatctct ccctcacctt tgaaataata ctgattactt
      961 acataacata ttgaaattag aatccgaata atttacctaa taaacctacg ccattttcaa
     1021 cgatgctcac aatgcttgtg cctaattttg cgccatcatt attaattgct gcagttacgg
     1081 tatctttaat tgcgttaaat aaaccttcca ttgaaaacac tccttaaaat ttaaatttga
     1141 agataacaaa aacgtgcgta gcttttaaat caccgaaatg ttattcgctt aacgttttgt
     1201 tgttgttatt ttaaaataaa tttgatgcaa ttagtttgtt tatccgcaca acatcttata
     1261 atgtacttaa ctgtatttta aagagaaaag aaatacagtt aggcattcaa aactgtattt
     1321 aacacaatta agttgcctga attcgtattt aagtcttatt gaaccttttt agataaatag
     1381 ctctataata gtgaaaaata taaacatttt ttatttacaa ggtattgcta atttaagttc
     1441 atttagatat aataattctt gtgttgttaa acgtgtcctg gtagctcagc tggatagagc
     1501 aatggccttc taagccatcg gtcgggggtt cgaatccctc ccaggacgtt tataggtatt
     1561 tttatacgca ttaccaaaca aaagagttcc gtgattacgg ggctcttttt gttttgaatt
     1621 tcagtaatat agtatgatgc gtcaccaaaa cgtcccccgc ataagccccg aaaatacagt
     1681 aattaaaaca agcatgctta ttcgttatag aattttttga cacacaattg acacgcgtct
     1741 gacacttgtt tatacatttt taattaagta attttgtgct caaatttcat ctatactgca
     1801 cctgaactac accaacacta caccaagatt tttaacactc accatttgca tgcgtagaga
     1861 tttttattat tatattattc ctatagattt tgatactatt caaaatttta gggacttttc
     1921 aggggcccga aatcctataa ttataattat atacatctaa aaaaaataac cacgtccatc
     1981 gagacgtggt tttttaatta tttaactcac taattattct tcttaatttt cattgctaaa
     2041 tatactattg gcaaatttat aaagtagttc agcgtttttc aatgacatat tgtctaatga
     2101 tctttcattt tttctcattc tgtgtattgt gctttgtgga actcctgttt gtttcgatat
     2161 atgcaaactg ctcaaatcac tgtctaatag tttttgaatt tgatttctca ttttgtacac
     2221 ccccttgtaa atcttcaatc atcatttaaa ttaaataatt acttttccac atattccaat
     2281 atttaggttg caaagcatac ctcaaatatc attaattttg agatttaaat gtcaattatg
     2341 tgtctatcaa tccaatatac atactctaat aacgtaatag tacacactct tcttattaat
     2401 tggccatagc tatcatgata taattagtga agaaaatcac ataagaaagg ttgtaaatca
     2461 tgagacttca aaaagcacct ctagtaacgt caggactagt cttaggatta ttaggcctgg
     2521 gtaatctatt aaaagactta tctcttactt taaacgctgt ttgcggaatc tttgctttct
     2581 tgatttggat tcacctttta tgtactatga tcaaatattt taataatgtg aaagaacaat
     2641 taaacagtcc tctagtttca tcagtgttca caacattttt catgtctggc tttttaggta
     2701 ctacttattt aaatacattt tttagtaaca taacttttat caatagctta ataacgccta
     2761 tttggatttt atgccttgtg ggaattatga cgcatatgat tattttttca ataaaatatt
     2821 taaaagattt ttcacttgaa aatgtttatc cttcgtggac tgtacttttt attggtattg
     2881 ctatcgcagg attgacggca cccgttagcg gatatttttt cataggtcaa ttaacagtaa
     2941 tatatggctt tgtagctact tgtattgtct tacctatagt tttcaagcga ttaaaagcat
     3001 ttccattgca gacgtcaatc aaaccgaaca catcgacaat ttgtgcacca ttttctttag
     3061 tcgctgcagc atatgttata gcttttccta aggcgaatgc ttttatcgta attatatttt
     3121 tactattagc tcaaatattt tatttttata tcattataca attgcctaaa ttactaaaag
     3181 aacctttttc gcccgtattt tcagctttca cattcccttt agtaatctca gcaactgctt
     3241 taaagaacag tttgcctgta cttatgtttc cagacatttg gaaaggtctt ttgtttatcg
     3301 aagtgttatt agccactgta atagtactta gagtctttat aggatatctt cacttctttt
     3361 taaaaaagga aaaacaagat aaatttcttc gtaatgcgtc tcagtaacac tattaccaag
     3421 aattaacacg tatatttaat aactaaaaag aggcaggtaa tcttgcctct ttttagtgta
     3481 tatcaatgcc tctttgattt aatatgatct tatcaatgat accttctgac taaagctgta
     3541 gtaactatac tagaacgtct agttcataaa cacgtttcac tctaaccttt atttaaataa
     3601 tatataagca gcaaacgcca aggctaatat accaataaaa taattaataa agatttttat
     3661 tttagtcttt gtaatagttg acaaatttta tcacctctaa atatcgataa attaaacacc
     3721 gttatttttc ctttgcctat cttttatcat ttcagaaggt actccgaaaa taaacatcag
     3781 aataaataat ataattggca aatgtggtat gttttctagc aaataccatc ttaaattcca
     3841 atcaaacacc atatttgcat acgccacaaa atatttacta aataataata ctacgcatat
     3901 tccagttagt gtatctaaaa cctttgtcaa atgtgtcatt tatagccatc ctttatatat
     3961 gctattttca caaccatatg tatcatgtgt tacaaaaact gtttacagca aatacatatt
     4021 taccacgata aatataatat accatagatc taacattaca ttaaaaacaa attttaaaaa
     4081 tatcattatt aaatagagca ttgtatcaat tacttactag tgttatcatt accgtcatta
     4141 ttttcttaat caaaaataat aatgcacctc gcttagttta gtatttctac aaacctacga
     4201 gatgcataaa accccattag tattttttat aatatagcat ttcaaattat gaataaatta
     4261 gtacttgcgt aattagtact ccgccaccga aaatcaatac aaaagcaact accggccata
     4321 caaatcggaa ccaatgtgaa tatcgcatgt ttaacatttg tagtgtggcc ataacaagtc
     4381 cagtcggcgc taagaataac atcgcatatt gaccaaattg atatgtcgta acgatgacga
     4441 atcttggtat acctactgta tcagctagtg gtgcaaagat aggcattgat aataccgcta
     4501 agccagaaga tgatggcacg ataaaaccta aacagaagaa aataaatagt aatacgatga
     4561 taaataatgg tccactcata tgttgaacta aagatgatga aaagtgtaag attgtatctg
     4621 aaatcatacc ttcattcaac actaaattaa tacctcgagc taaaccaata attaaagata
     4681 cacctactaa acttgatgca ccattgacaa atgcatctac agttcctttt tctcccaatc
     4741 cagatttacc tgtcccagca ataaacatta ttataattgt aaatattaaa aatgctgaag
     4801 ccataactgg gaaccaccaa ccttgcgtca taactcccca taccataatt ggaaatggta
     4861 gtacaaataa tgtaaggatt atcttcttac gcaaagtaaa atgggcacta tcgtcatctt
     4921 ttaatacaga ccattgctgt tcaaaagcat ctttgtcttc ataagaatat gacgctttag
     4981 gatcgttttt aattttttta cagtaccaat ataaataact aataacaaaa atcgcaccga
     5041 caatacaagc acctattctc caatacaagc catccgtaaa agttgtacca gcggcattag
     5101 aggcaattac aaccgagaac gggttaatag ttgaaaatgt actaccgaca gagctggcaa
     5161 ggaatatggc accaactgaa acgatagaat cgtatcctaa cgctataaat atagggacta
     5221 aaatcggata aaatgctaca gcttcttctt caataccaca taatgtcccg ccgataatca
     5281 ttagtattga tacaaacaca attagcataa attcatgccc ttttgttttc ttcgttaaag
     5341 ctaacaatcc cgattcaaaa gaaccactgg cttgaactac gccaataagt ccccctagta
     5401 caagaatgaa taccatgata tcgaccgctt ctatcgtacc ttcaaccatg ctacttgtta
     5461 tttgttctgg tccagctgga tgttgcttta atctttcata agtattcgga attgataccg
     5521 gcttattaat tgcacctgat ttaaattgtt caatcttaat tttaaccccc attttgtcta
     5581 gttcctgttg cgtacccgga acctttttca cttggttatg agggttaact atctttagtt
     5641 cttgggatga aggttcgtaa gaaagtttag aatatgcacc agcaggaata acccatgttg
     5701 ctataactgc aacaaccgtt aaaatgaata aaatcataaa tgcacctggc atttttaatt
     5761 taaatcgttt tttcttttca ctttcattaa ttgtattttc cacggtttca tctccttcga
     5821 catttaacct agcatttcta ccttaaagat tttataaata taaattaaga aagtgcaccc
     5881 cgcatcaaaa tagaggcatt attttcaggg ggtgcacata aataataaaa atcatgcatt
     5941 tgacatatag taattgaaaa gcgtttcaat tcaattactt tttaatcaca gtacctactt
     6001 taccctctaa ggcagcatct aattcattta atgatgttat aagcacactt ccttttggat
     6061 tgttttcaat aaatgatatg gctgcttcaa tttttggtaa catacttcct tttgcaaatt
     6121 gattttcgtc tatatatcgt tttaattcat caacatttgt tgttttcaaa ggctgttggt
     6181 tttcagtgtt aaaattaata tatacataat caattgctgt taaaataatc aattgatcgc
     6241 attgaatatt agcacccaac aacgcacttg ttttatcttt gtctataact gcatcaatac
     6301 ctttaaaacc atcatgttgc tctctaatta ctggtatacc tccaccacca gcagcaataa
     6361 cgagtgtatc atttttaata agtgttttaa tactctctaa ttcaataata gagatgggtt
     6421 gtggtgaagg aacaacgcgt ctatatcctc ttccagcatc ttcaacaaat ataaatcctt
     6481 tttctttttg aatttgttca gcttcttctt tgttgtaaaa taacccaatt ggttttgaag
     6541 gattgttaaa tgccggatca ttttcatcaa cttcaacttg tgtcactagt gttaccactt
     6601 gtttatccat tccaatagaa tgcaattcat tttgtaagct ttcttgtaat tgatagccga
     6661 tgtaagcttg actcattgcg ccacattcag caaatggaaa tgccggacct tggttatgtt
     6721 ctgcagcata gttaagtccc aaattaatgc ttccaacctg tggtccatta ccatgactaa
     6781 taacaatctc atgtcctttt gttattaatc ctactaatga tttcgcagta tttttaacaa
     6841 gctcgagttg ttcttgaggt gattttccta aagcattacc acctaatgct actactattt
     6901 tcgccatcat attcacttcc ttatatcatt taaaattcac ccaatgtagc aaccatgact
     6961 gctttgattg tatgcattct gttctcagct tcttggaata caactgaagc tttactttcg
     7021 aatacttcat ctgtaacttc catttctcga ataccatatt tttcaaaaat ttgttgacct
     7081 attttcgtat cagcattatg gaaagatggt aagcaatgct caaaaataac atttggatta
     7141 ccagttttat ccattatttc tttatttact tgatatggtt tcaataattc aagtcgttct
     7201 ttccatactt catcaggttc acccattgat acccaaacat cagtgtaaat tacatccgaa
     7261 ccttttacac cttggtcaat atcatctgtg attaatatgt tgccaccatt ttcagcggca
     7321 atatttttac agcgatttaa taattcatct gttggattta attcttttgg acaaactaaa
     7381 tggaagttca tacccataat ggcagcacct tgcattaatg catttgcaac gttattacga
     7441 ccatctccaa catatgtaaa gttaatatct gcataatctt tttttaagac ttcttttgct
     7501 gttaagaaat cagcaagaac ttgagtagga tgatcttcat cagttaaacc attccacact
     7561 ggtacgcctg aatactcagc taaagtttct actgttcttt gtgaaaaacc acggtattca
     7621 atgccatcat acattccacc aagcacacgt gcagtatctt tagttgtttc ttttttaccc
     7681 atttgtgatc cagttgggcc taaataagtt acatttgcac cttgatcatg cgctgcaact
     7741 tcaaatgcac atcgcgttct tgtagaatct ttttcaaata acagtgcaat atttttattt
     7801 tttaacatag gcttttcagt gccaatatat ttagcacgtt ttaaatcctc ggagagtgtt
     7861 aataagaatt ctacctcttg tcgtgaaaag tctaataaag ttaaaaaact tctgtttcgt
     7921 aaatttttca ttaataacaa ctccttttat tttagttaca cctaaattgt aagcgcatac
     7981 aaaataaaca caacctacta ttaaaatttg taatatttta tcaataatta aatgaacatt
     8041 ttattaatat taaatttaag tagtaggaaa taattaaaat aagtactaca tttaaagtat
     8101 aactattttt caagtagtta g
//
LOCUS       DALPQQ010000108         8074 bp    DNA     linear   BCT 22-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus strain K18-6-464
            SAMD00233528-rid16434743.denovo.108, whole genome shotgun sequence.
ACCESSION   DALPQQ010000108 DALPQQ010000000
VERSION     DALPQQ010000108.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMD00233528
            Sequence Read Archive: DRR236061
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 8074)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8074)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001543423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001543423.1
            Genome Coverage       :: 77x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/22/2022 17:09:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,811
            CDSs (total)                      :: 2,743
            Genes (coding)                    :: 2,689
            CDSs (with protein)               :: 2,689
            Genes (RNA)                       :: 68
            rRNAs                             :: 2, 4, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 4, 2 (16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 54
            CDSs (without protein)            :: 54
            Pseudo Genes (ambiguous residues) :: 0 of 54
            Pseudo Genes (frameshifted)       :: 27 of 54
            Pseudo Genes (incomplete)         :: 27 of 54
            Pseudo Genes (internal stop)      :: 10 of 54
            Pseudo Genes (multiple problems)  :: 10 of 54
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8074
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMD00233528-rid16434743.denovo.108"
                     /strain="K18-6-464"
                     /db_xref="taxon:1280"
                     /geo_loc_name="Japan: Niigata"
     gene            50..841
                     /gene="pgeF"
                     /locus_tag="O7798_002088"
     CDS             50..841
                     /gene="pgeF"
                     /locus_tag="O7798_002088"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000999349.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidoglycan editing factor PgeF"
                     /protein_id="HDC2864315.1"
                     /translation="MNDNFKKQPHHLIYEELLQQGITLGITTRGDGLSDYPKNAFNMA
                     RYIDDRPYNITQHQLQLAEKIAFDRKNWVFPIQTHENKVACITKDDIGTNIDTLTDAL
                     HGIDAMYTYDSNVLLTMCYADCVPVYFYSTKHHFIALAHAGWRGTYTEIVKEVLKHVN
                     FDLKDLHVVIGPSTSSSYEINDDIKNKFETLPIDSANYIETRGRDRHGIDLKKANAAL
                     LIYYGVPKENIYTTAYATSEHLELFFSYRLEKGQTGRMLAFIGQQ"
     gene            865..1533
                     /locus_tag="O7798_002089"
     CDS             865..1533
                     /locus_tag="O7798_002089"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499694.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YggS family pyridoxal phosphate-dependent
                     enzyme"
                     /protein_id="HDC2864316.1"
                     /translation="MKDNLQQISTQINDKSEKNNFSTKPNVIAVTKYVTIERAKEAYE
                     AGIRHFGENRLEGFFQKKEALPSDAVIHFIGSLQSRKVKDVINDVDYFHALDRLSLAK
                     EINKRAEHKIKCFLQVNVSGEASKHGIALEDVDQFIDDLKKYDKIEIVGLMTMAPLTD
                     DEAYIRSLFKQLRLKKEEIQRLNLEYAPCDELSMGMSNDYLIAVEEGATFVRIGTKLV
                     GEEE"
     gene            1530..2093
                     /locus_tag="O7798_002090"
     CDS             1530..2093
                     /locus_tag="O7798_002090"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499695.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein SepF"
                     /protein_id="HDC2864317.1"
                     /translation="MSHLALKDLFSGFFVIDDEEEVEVPDKQQQVNEAPAKEQSQQTT
                     KQNAIKSVPQKSASRYTTTSEERNNRMSNYSKNNSRNVVTMNNATPNNASQESSKMCL
                     FEPRVFSDTQDIADELKNRRATLVNLQRIDKVSAKRIIDFLSGTVYAIGGDIQRVGTD
                     IFLCTPDNVEVAGSITDHIENMEHSFD"
     gene            2105..2395
                     /locus_tag="O7798_002091"
     CDS             2105..2395
                     /locus_tag="O7798_002091"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499696.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YggT family protein"
                     /protein_id="HDC2864318.1"
                     /translation="MDINVLATIFKFILFVVEIYYFGMIIYFFTSWVPSIRETKVGYF
                     LAKIYEPFLQPFRKVIPPIGIIDISSIAAIIVLVLFQKGLLQIFNWILIQLQ"
     gene            2505..3284
                     /locus_tag="O7798_002092"
     CDS             2505..3284
                     /locus_tag="O7798_002092"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001827493.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA-binding protein"
                     /protein_id="HDC2864319.1"
                     /translation="MINIDIYQHFRQEEYELIDQLTDKCDQAEQHYAPVLTHFLDPRG
                     QYILEVICGSYEDLNVSFYGGPNAERKRAIISPNYYEPKESDFELTLMEIDYPEKFVT
                     LKHQHILGTLMSLGIEREQVGDIIVNERIQFVLTSRLESFIMLELQRIKGASVKLYTI
                     PVTDMIQSNENWKNESATVSSLRLDVVIKEMIRKSRTIAKQLIEKKRVKVNHTIVDSA
                     DFQLQANDLISIQGFGRAHITDLGGKTKKDKTHITYRTLFK"
     gene            3308..3925
                     /locus_tag="O7798_002093"
     CDS             3308..3925
                     /locus_tag="O7798_002093"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499698.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DivIVA domain-containing protein"
                     /protein_id="HDC2864320.1"
                     /translation="MPFTPNEIKNKEFSRVKNGLEPTEVANFLEQLSTEIERLKEDKK
                     QLEKVIEERDTNIKSYQDVHQSVSDALIQAQKAGEETKQAAEKQAEAIIAKAEAQANQ
                     MVGDAVEKARRLAFQTEDMKRQSKVFRSRFRMLVEAQLDLLKNEDWDYLLNYDLDAEQ
                     VTLENIHHLHENDLKPDEVAANAQNNASNTPDNNQQSNDSETTKK"
     gene            4146..6899
                     /gene="ileS"
                     /locus_tag="O7798_002094"
     CDS             4146..6899
                     /gene="ileS"
                     /locus_tag="O7798_002094"
                     /EC_number="6.1.1.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499699.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="isoleucine--tRNA ligase"
                     /protein_id="HDC2864321.1"
                     /translation="MDYKETLLMPKTDFPMRGGLPNKEPQIQEKWDAEDQYHKALEKN
                     KGNETFILHDGPPYANGNLHMGHALNKILKDFIVRYKTMQGFYAPYVPGWDTHGLPIE
                     QALTKKGVDRKKMSTAEFREKCKEFALEQIELQKKDFRRLGVRGDFNDPYITLKPEYE
                     AAQIRIFGEMADKGLIYKGKKPVYWSPSSESSLAEAEIEYHDKRSASIYVAFDVKDDK
                     GVVDADAKFIIWTTTPWTIPSNVAITVHPELKYGQYNVNGEKYIIAEALSDAVAEALD
                     WDKASIKLEKEYTGKELEYVVAQHPFLDRESLVINGDHVTTDAGTGCVHTAPGHGEDD
                     YIVGQKYELPVISPIDDKGVFTEEGGQFEGMFYDKANKAVTDLLTEKGALLKLDFITH
                     SYPHDWRTKKPVIFRATPQWFASISKVRQDILDAIENTNFKVNWGKTRIYNMVRDRGE
                     WVISRQRVWGVPLPVFYAENGEIIMTKETVNHVADLFAEHGSNIWFEREAKDLLPEGF
                     THPGSPNGTFTKETDIMDVWFDSGSSHRGVLETRPELSFPADMYLEGSDQYRGWFNSS
                     ITTSVATRGVSPYKFLLSHGFVMDGEGKKMSKSLGNVIVPDQVVKQKGADIARLWVSS
                     TDYLADVRISDEILKQTSDVYRKIRNTLRFMLGNINDFNPDTDSIPESELLEVDRYLL
                     NRLREFTASTINNYENFDYLNIYQEVQNFINVELSNFYLDYGKDILYIEQRDSHIRRS
                     MQTVLYQILVDMTKLLAPILVHTAEEVWSHTPHVKEESVHLADMPKVVEVDQALLDKW
                     RTFMNLRDDVNRALETARNEKVIGKSLEAKVTIASNDKFNASEFLTSFDALHQLFIVS
                     QVKVVDKLDDQATAYEHGDIVIEHADGEKCERCWNYSEDLGAVDELTHLCPRCQQVVK
                     SLV"
     gene            7189..7986
                     /locus_tag="O7798_002095"
     CDS             7189..7986
                     /locus_tag="O7798_002095"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499700.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HDC2864322.1"
                     /translation="MYHNSNANFVNGITLNVRDKNELKPFYEDILGLNIINETLTSIQ
                     YEVGQNNHVITLVELQNGREPLMSEAGLFHIAIKLPQISDLANLLIHLSEYDIPVNGG
                     IQPASLSLFFEDPEGNGFKFYVDKDEAQWTRQNNLVKIDIRPLNVPRLVSHATKLLWL
                     GIPDDAIIGALHIKTIHLSEVKEYYLDYFGLEQSAYMDDYSIFLASNGYYQHLAMNDW
                     VSATKRVENFDTYGLAIVDFHYPETTHLNLQGPDGIYYRFNHIEVED"
BASE COUNT         2951 a         1136 c         1533 g         2454 t
ORIGIN      
        1 ttgtacagtt agacgaagat aatttaaatg aaatgatggt gacgatcgag tgaatgataa
       61 ttttaaaaag caaccgcatc atttaatata tgaagagtta ttacaacaag gtattactct
      121 aggtattaca actagaggag atggtttaag tgactatcct aaaaatgctt ttaatatggc
      181 gagatatatt gatgatcgcc catataatat tactcaacat caattgcaat tagctgaaaa
      241 aattgcgttt gatagaaaaa attgggtgtt tcccattcaa acacatgaaa ataaagtcgc
      301 ttgtattaca aaggatgata taggcacaaa tatagacact ttaactgatg cgcttcatgg
      361 tattgatgcg atgtacacat atgatagtaa tgtcttatta acgatgtgtt atgcagactg
      421 tgtaccagta tatttttata gtacaaaaca tcattttatt gcattggcgc atgcaggttg
      481 gcgtggtacc tatactgaaa ttgtaaaaga agtgctaaaa catgtgaact ttgatttgaa
      541 agacttacat gtcgttattg gaccatctac atcatcaagt tatgaaatta atgatgatat
      601 taaaaataaa tttgaaacat tgccaattga tagtgccaac tatattgaaa ctagaggacg
      661 agatcgtcat ggtattgatt tgaaaaaagc caatgctgca ttattaattt attatggtgt
      721 tcctaaagaa aatatttata cgacagcgta tgctacatct gaacatttag aattattttt
      781 ctcttatcga ttagaaaaag gtcaaacagg acgcatgtta gcattcattg gtcaacagta
      841 aacaaggagg agatatgttt gcgtgtgaaa gataatttac aacaaatctc aacacaaatt
      901 aatgacaaaa gtgaaaaaaa taatttttca acaaaaccaa acgtgattgc agttacaaaa
      961 tatgttacaa tagagcgagc taaagaagcg tatgaggctg gaataagaca ttttggtgag
     1021 aatagattgg aaggcttttt tcaaaagaaa gaagcattac catcagatgc ggtgatccat
     1081 tttataggat cattacaatc tcgaaaagtt aaggacgtta taaacgacgt agattatttc
     1141 catgctttag atcgattgag cttagccaaa gaaattaaca aacgtgcaga acataaaatt
     1201 aaatgtttct tgcaagtgaa cgtttcggga gaagcttcta aacatggtat tgctttagaa
     1261 gatgttgatc agtttataga tgatcttaaa aaatatgaca aaatcgaaat tgtaggttta
     1321 atgacgatgg caccattgac agatgatgaa gcatatatta gatcgttatt taaacagtta
     1381 cgtttgaaaa aagaagaaat acaacgactc aatttagaat atgcgccttg tgatgaatta
     1441 tcaatgggaa tgagtaatga ctatcttatt gcagttgaag aaggtgcgac gtttgttaga
     1501 attgggacta aacttgtagg agaagaggag tgagccactt ggctttaaaa gatttattta
     1561 gtggattttt tgtaatagat gatgaagagg aagtagaagt acctgacaaa caacaacagg
     1621 taaatgaagc gccagcaaaa gagcagtcac aacaaacaac aaaacaaaac gcaatcaaat
     1681 cagtccctca aaaatctgca tcaagatata caacaacgtc agaagaaagg aataaccgta
     1741 tgtctaatta ttcaaaaaat aattcacgta atgttgtaac tatgaacaat gctacaccaa
     1801 acaatgcatc acaagaaagt tcaaaaatgt gtttattcga accacgtgtt ttttcagata
     1861 cacaagatat tgctgatgag cttaaaaacc gccgtgcgac acttgtcaat ttacaacgta
     1921 ttgataaagt atcagcgaaa agaattattg attttttaag cggtactgtt tatgcaatcg
     1981 gtggagatat ccaacgtgta ggtactgata ttttcttatg tacgcctgat aatgtggaag
     2041 tagctggaag cattacagac catattgaaa atatggaaca ttcattcgac taaggagtta
     2101 acatatggat ataaatgtgc tagctacaat atttaaattc atcctttttg ttgttgaaat
     2161 ttattatttc ggcatgatta tatatttctt tacatcttgg gtaccaagta ttagagaaac
     2221 taaggtaggt tattttttag cgaaaatata tgaacctttc ttacaaccat ttagaaaagt
     2281 aattccacct attggaatta tcgacatatc atcaatcgct gcaattatcg ttttagtatt
     2341 attccaaaaa gggttactcc aaatctttaa ttggatttta attcaattac aataaattaa
     2401 gcgacataac gaggcaaggg tacatgatac tttagcctcg tttttgatat gtatttttct
     2461 gaatataagg gcaatagatg gtattttata atttttttaa ggtagtgatt aacatagata
     2521 tttatcaaca ctttagacag gaagaatacg aattaattga tcagctaacg gataaatgtg
     2581 atcaagcgga acagcattat gcaccagtat taacgcattt tttagatcca agagggcaat
     2641 atatattgga agtgatttgt ggcagttatg aagatttaaa cgtatctttt tatggtggac
     2701 ctaatgctga aagaaaaaga gcaatcattt cgccgaacta ttatgaacct aaagaaagcg
     2761 actttgaatt aactttaatg gaaatagatt atcctgaaaa attcgtcact ttaaaacatc
     2821 aacatatttt agggacatta atgtctttag gtatcgaacg cgaacaagtt ggagatataa
     2881 ttgtgaatga acgaattcaa tttgttttga caagtagatt ggaatcattt attatgttag
     2941 aattacaacg tattaaaggc gcatcagtta aactttatac tattccagta acagatatga
     3001 tacaatctaa tgagaattgg aaaaatgaaa gtgcaacagt tagttcttta aggttagatg
     3061 ttgttattaa agaaatgata cgtaaatcac gtacgattgc gaaacaacta atcgaaaaaa
     3121 aacgtgttaa agtgaatcac actattgttg attcagcaga ttttcaatta caagcaaatg
     3181 atttaatatc catccaaggt tttggtagag cacacattac tgacttaggt ggtaaaacta
     3241 aaaaagataa aacgcacatt acctatagaa cattattcaa atagtaatga tttaaggagg
     3301 ataacaaatg ccttttacac caaatgaaat taagaataaa gagttttcac gtgtaaagaa
     3361 tggtttagaa cctactgaag ttgctaattt tttggagcaa ctaagcactg aaattgaacg
     3421 tcttaaagaa gataaaaaac aacttgaaaa agtaatcgaa gagagagata ctaatattaa
     3481 gtcttatcaa gacgtgcatc aatctgtaag tgatgctttg atacaagctc aaaaagctgg
     3541 tgaagaaact aagcaagctg cagagaaaca agctgaagcg attatagcta aggcagaagc
     3601 gcaagctaat caaatggttg gtgacgcggt agaaaaagca cgccgtttag cattccagac
     3661 tgaagatatg aaacgtcaat caaaagtatt tagatcgcgt ttccgtatgt tagttgaagc
     3721 gcaattagac ttattaaaaa acgaagattg ggattacttg ttgaattatg atttagacgc
     3781 tgaacaagtg acgcttgaaa atattcatca tttgcatgaa aatgatttaa agccagatga
     3841 agttgcagca aatgcacaaa ataatgcatc aaatacacca gacaataatc aacaatccaa
     3901 tgattcagaa acaactaaga agtaagaatt aaataaagac agacgcgtaa tatacattta
     3961 acttttcaca gcgaattagg taatggtgag agcctagtaa aagcatgtat gttatatcac
     4021 tggcttttta atatttaaat aatgtaatga gagaactcta agttgagtta ataagggtgg
     4081 taccgcgagc aatcgtccct tttaatttaa cttagagttt tttaaatttt taaggagtga
     4141 aaaaaatgga ttacaaagaa acgttattaa tgcctaaaac agatttccca atgcgaggtg
     4201 gtttaccaaa caaggaaccg caaattcaag aaaaatggga tgcagaagat caataccata
     4261 aagcgttaga aaaaaataaa ggtaacgaaa cattcatttt acatgatggc ccaccatacg
     4321 cgaatggtaa cttacatatg ggacatgcct tgaacaaaat tttaaaagac tttattgtac
     4381 gttataaaac tatgcaaggg ttctatgcac catacgtacc aggttgggat acacatggtt
     4441 taccaattga acaagcatta acgaaaaaag gtgttgaccg aaagaaaatg tcaacagctg
     4501 aattccgtga gaaatgtaaa gaatttgctt tagaacaaat tgaattacag aaaaaagatt
     4561 ttagacgttt aggtgttcgt ggtgacttta atgatccata tattacatta aaacctgaat
     4621 acgaagctgc acaaattcgt atttttggag aaatggcaga taaaggttta atttataaag
     4681 gtaaaaagcc agtttattgg tctccttcaa gtgagtcttc attagcagaa gcagaaattg
     4741 aatatcacga taaacgttca gcatcaattt acgttgcatt tgacgttaaa gatgacaaag
     4801 gtgtcgttga tgcagatgct aaatttatta tctggacaac aacgccatgg acaattccat
     4861 caaatgttgc gattaccgtt catcctgaat taaaatatgg tcaatacaat gtaaatggcg
     4921 aaaaatatat tattgcagaa gccttgtctg acgctgtagc agaagcactg gattgggata
     4981 aagcatcaat caaattagaa aaagaataca caggtaaaga attagagtat gttgtagcac
     5041 aacatccatt cttagacaga gaatcgttag tgattaatgg tgatcatgtt actacagatg
     5101 ctggtacagg ttgtgtacat acagcaccag gtcacgggga agatgactat attgttggtc
     5161 aaaaatatga attgccagta attagtccaa tcgatgataa aggtgtattt actgaagaag
     5221 gcggccaatt tgaagggatg ttctatgata aagctaataa agccgttact gatttattaa
     5281 cagaaaaagg tgcactatta aaattagact ttattacaca tagctatcca cacgactgga
     5341 gaacaaaaaa acctgtaatc ttccgtgcta caccacaatg gtttgcctca atcagtaaag
     5401 taagacaaga tattttagat gcaatcgaaa atacaaactt caaagtaaat tggggtaaaa
     5461 cacgtattta caatatggtt cgtgaccgtg gcgaatgggt tatttctcgt caacgtgtgt
     5521 ggggtgtacc gttaccagta ttttatgctg aaaatggcga aattatcatg acgaaagaaa
     5581 cagtgaatca tgttgctgat ttatttgcag aacacggttc aaatatttgg tttgaaagag
     5641 aagcgaaaga cttactacca gaaggattta cacatccagg cagccctaac ggtacattta
     5701 ctaaagaaac agacattatg gacgtttggt ttgattctgg ttcatcacac cgtggcgtgt
     5761 tggaaacaag accggaatta agtttcccag cggatatgta tttagaaggt agtgaccaat
     5821 atcgtggttg gttcaactct tctatcacaa cttcagttgc tacaagagga gtatcacctt
     5881 ataaattctt actttctcat ggttttgtta tggacggtga aggtaagaaa atgagtaaat
     5941 ctttaggtaa tgtgattgta cctgaccaag tggttaaaca aaaaggtgct gatattgcga
     6001 gactttgggt aagtagtacg gactatttag ctgatgttag aatttctgat gaaattttaa
     6061 aacaaacatc tgatgtttat cgtaaaatca gaaatacatt aagatttatg ttaggtaaca
     6121 ttaacgattt caatcctgac acagatagca ttcctgaatc agagttatta gaagtggatc
     6181 gttacttgct aaatcgttta cgtgaattta ctgcaagtac gattaacaac tatgaaaact
     6241 ttgactactt aaatatttat caagaagttc aaaactttat caatgttgag ttaagtaatt
     6301 tctatttgga ttacggtaaa gatattttat atattgaaca acgtgattct catatccgtc
     6361 gtagtatgca aacagtgtta tatcaaattt tagttgatat gacgaagttg ttagcaccaa
     6421 tcttagtgca tacagctgaa gaagtttggt ctcatacacc acatgttaaa gaagaaagtg
     6481 ttcacttagc agacatgcct aaagttgtag aagtagatca agctttattg gataaatggc
     6541 gtacatttat gaatttacgt gatgatgtga accgtgcatt agaaactgct cgtaatgaaa
     6601 aagttattgg taaatcatta gaagctaaag ttacgattgc tagtaacgat aaatttaatg
     6661 catctgaatt cttaacttca tttgatgcat tacatcaatt atttatcgtg tcacaagtta
     6721 aagttgtaga taagttagac gatcaggcaa cagcttatga acatggtgat attgtcatcg
     6781 aacatgcaga tggtgaaaaa tgtgaaagat gttggaacta ttcagaggat cttggtgctg
     6841 ttgatgaatt gacgcatcta tgtccacgat gccaacaagt tgtaaaatca cttgtataat
     6901 tgaaattgta taaagtactc atacagatga tataaattaa agctctcttc ataatcatgt
     6961 tgtagttttt gttgacatga tgaagagagt ttttttgtga ataaaaaaat gaccaagtta
     7021 ccggtcatat atgtaaaaaa tgtgcgattt actaaaataa aaattattca ggaatggtac
     7081 aaattctctg aggcatataa atgcgttata gttgctattc tcaattatgt tcgcgataat
     7141 tttaagtaaa agtaagcaca gatattgaat ttgataggag ttaattgaat gtatcataac
     7201 agtaacgcaa actttgtcaa tggtatcact ttaaatgtga gagataagaa tgaattaaag
     7261 ccattttatg aggacatatt aggattaaat attataaatg agacattaac atcgatacaa
     7321 tatgaagtag gtcaaaataa tcatgtcatt acacttgttg aattacaaaa tggacgtgaa
     7381 cctttaatgt ccgaagcggg actgtttcat atcgcaatta aactacctca aattagtgat
     7441 ttagctaatt tactaattca tttaagcgaa tatgatattc cagttaacgg aggtatacag
     7501 cctgcttcgt tatcattatt ttttgaagac ccggaaggaa acggttttaa attttatgtt
     7561 gataaagacg aagcgcaatg gacgaggcaa aataatttag taaaaattga tattagacca
     7621 ttaaatgtac cgagattagt gagtcatgca acaaaattgt tatggttagg tattccagat
     7681 gacgctatta taggtgcatt gcatattaag acaattcatt tatcagaggt aaaagagtac
     7741 tacctcgatt attttggatt agagcaatcg gcatatatgg atgattattc aatattttta
     7801 gcatcgaatg gctattatca acatttggcc atgaatgatt gggtatcagc aacgaaacgt
     7861 gtagaaaatt ttgatacgta tggattagca attgttgact ttcattatcc tgaaacaaca
     7921 catttaaatt tacaaggtcc ggatggtatc tattatcgct ttaatcatat cgaagttgaa
     7981 gattagtata tactttgaat ggacgaacca tataatgaat cgtttttaat gatcttttta
     8041 tacaagttat gaaggaggct gggacattaa gttc
//
LOCUS       DALPQQ010000109         7992 bp    DNA     linear   BCT 22-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus strain K18-6-464
            SAMD00233528-rid16434743.denovo.109, whole genome shotgun sequence.
ACCESSION   DALPQQ010000109 DALPQQ010000000
VERSION     DALPQQ010000109.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMD00233528
            Sequence Read Archive: DRR236061
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 7992)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7992)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001543423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001543423.1
            Genome Coverage       :: 77x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/22/2022 17:09:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,811
            CDSs (total)                      :: 2,743
            Genes (coding)                    :: 2,689
            CDSs (with protein)               :: 2,689
            Genes (RNA)                       :: 68
            rRNAs                             :: 2, 4, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 4, 2 (16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 54
            CDSs (without protein)            :: 54
            Pseudo Genes (ambiguous residues) :: 0 of 54
            Pseudo Genes (frameshifted)       :: 27 of 54
            Pseudo Genes (incomplete)         :: 27 of 54
            Pseudo Genes (internal stop)      :: 10 of 54
            Pseudo Genes (multiple problems)  :: 10 of 54
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7992
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMD00233528-rid16434743.denovo.109"
                     /strain="K18-6-464"
                     /db_xref="taxon:1280"
                     /geo_loc_name="Japan: Niigata"
     gene            245..1420
                     /gene="rpsA"
                     /locus_tag="O7798_002096"
     CDS             245..1420
                     /gene="rpsA"
                     /locus_tag="O7798_002096"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500011.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S1"
                     /protein_id="HDC2864323.1"
                     /translation="MTEEFNESMINDIKEGDKVTGEVQQVEDKQVVVHINGGKFNGII
                     PISQLSTHHIDSPSEVVKEGDEVEAYVTKVEFDEENETGAYILSRRQLETEKSYSYLQ
                     EKLDNNEIIEAKVTEVVKGGLVVDVGQRGFVPASLISTDFIEDFSVFDGQTIRIKVEE
                     LDPENNRVILSRKAVEQEENDAKKDQLLQSLNEGDVIDGKVARLTQFGAFIDIGGVDG
                     LVHVSELSHEHVQTPEEVVSIGQDVKVKIKSIDRDTERISLSIKDTLPTPFENIKGQF
                     HENDVIEGVVVRLANFGAFVEIAPGVQGLVHISEIAHKHIGTPGEVLEPGQQVNVKIL
                     GIDEENERVSLSIKATLPNEDVVESDPSTTKAYLENEEEDNPTIGDMIGDKLKNLKL"
     gene            1642..2952
                     /gene="der"
                     /locus_tag="O7798_002097"
     CDS             1642..2952
                     /gene="der"
                     /locus_tag="O7798_002097"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019167598.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome biogenesis GTPase Der"
                     /protein_id="HDC2864324.1"
                     /translation="MTKPIVAIVGRPNVGKSTIFNRIVGERVSIVEDTPGVTRDRIYS
                     SGEWLTHDFNIIDTGGIEIGDAPFQTQIRAQAEIAIDEADVIIFMVNVREGLTQSDEM
                     VAQILYKSKKPVVLAVNKVDNMEMRTDVYDFYSLGFGEPYPISGSHGLGLGDLLDAVV
                     SHFGEEEEDPYDEDTIRLSIIGRPNVGKSSLVNAILGEDRVIVSNVAGTTRDAIDTEY
                     SYDGQDYVLIDTAGMRKKGKVYESTEKYSVLRALKAIERSNVVLVVIDAEQGIIEQDK
                     RVAGYAHEQGKAVVIVVNKWDTVEKDSKTMKKFEDEVRKEFQFLDYAQIAFVSAKERT
                     RLRTLFPYINEASENHKKRVQSSTLNEVVTDAISMNPTPTDKGRRLNVFYATQVAIEP
                     PTFVVFVNDVELMHFSYKRYLENQIRAAFGFEGTPIHIIARKRN"
     gene            2969..3967
                     /locus_tag="O7798_002098"
     CDS             2969..3967
                     /locus_tag="O7798_002098"
                     /EC_number="1.1.1.94"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500009.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H-dependent glycerol-3-phosphate
                     dehydrogenase"
                     /protein_id="HDC2864325.1"
                     /translation="MTKITVFGMGSFGTALANVLAENGHDVLMWGKNQDAVDELNTCH
                     TNKKYLKYAKLDVNIIATSDMTKAIQFADIYLMALPTKAMREVASQINDKLTSKKTFI
                     HVAKGIENGTFKRVSEMIEDSISPEYNAGIGVLSGPSHAEEVVVKQPTTVAASSKDKS
                     VSKLTQDLFMNDYLRVYTNDDLIGVELGGALKNIIAVASGIVAGIGYGDNAKAALMTR
                     GLAEISRLGEKLGADPMTFLGLGGIGDLIVTCTSTHSRNFTLGYKLGQGESMDQALSE
                     MNMVVEGIYTTKSVYHLAKEKNVDMPITNALYRVLFENISVKECVKDLMERDKKSE"
     gene            4138..4410
                     /locus_tag="O7798_002099"
     CDS             4138..4410
                     /locus_tag="O7798_002099"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015900354.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HU family DNA-binding protein"
                     /protein_id="HDC2864326.1"
                     /translation="MNKTDLINAVAEQADLTKKEAGSAVDAVFESIQNSLAKGEKVQL
                     IGFGNFEVRERAARKGRNPQTGKEIDIPASKVPAFKAGKALKDAVK"
     gene            4841..5413
                     /locus_tag="O7798_002100"
     CDS             4841..5413
                     /locus_tag="O7798_002100"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500006.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heptaprenyl diphosphate synthase component 1"
                     /protein_id="HDC2864327.1"
                     /translation="METTVSKLERQIEERLKGVSEYESININHRLGKLLDLYDIPDVA
                     KVACLTIDTSMRHLDDITYNHLSKHSILIGDLISAHFYTLLAEINDLSFQNEISKAIV
                     EINELKSSLHHQALNDYEISQAIVKIETLFPYITLSHFGINIDESEIYNYLFEDMSDY
                     YPSYFKKYNQSEVKHYLHDIQKSYLKSRGN"
     gene            5416..6141
                     /locus_tag="O7798_002101"
     CDS             5416..6141
                     /locus_tag="O7798_002101"
                     /EC_number="2.1.1.163"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000774689.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="demethylmenaquinone methyltransferase"
                     /protein_id="HDC2864328.1"
                     /translation="MADNKANKEQVHRVFQNISKKYDRLNNIISFEQHKVWRKRVMKD
                     MGVRKGTKALDVCCGTGDWTIALSKAVGPTGEVTGIDFSENMLEVGKEKTASMENVKL
                     VHGDAMELPFEDNSFDYVTIGFGLRNVPDYLVALKEMNRVLKPGGMVVCLETSQPTLP
                     VFKQMYALYFKFVMPIFGKLFAKSKEEYEWLQQSTFNFPGKEELKRMFEEAGFINVRV
                     RSFTGGVAAMHLGYKEKDNTKGD"
     gene            6143..7102
                     /locus_tag="O7798_002102"
     CDS             6143..7102
                     /locus_tag="O7798_002102"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002463052.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polyprenyl synthetase family protein"
                     /protein_id="HDC2864329.1"
                     /translation="MAKLNMNNEIKKVEQRLEKAIKSKDSVLEQASLHLLSSGGKRVR
                     PAFVILSSQFGKDEQTSEQTYQVAVALELIHMATLVHDDVIDKSDKRRGKLTISKKWD
                     QTTAILTGNFLLALGLEHLMAVKDNRVHQLISESIVDVCRGELFQFQDQFNSQQTIIN
                     YLRRINRKTALLIQISTEVGAITSQSDKETVRKLKMIGHYIGMSFQIIDDVLDFTSTE
                     KKLGKPVGSDLLNGHITLPILLEMRKNPDFKLKIEQLRRDSERKEFEECIQIIRKSDS
                     IDEAKAVSSKYLSKALNLISELPDGHPKSLLLSLTKKMGSRNT"
     gene            7194..7643
                     /gene="ndk"
                     /locus_tag="O7798_002103"
     CDS             7194..7643
                     /gene="ndk"
                     /locus_tag="O7798_002103"
                     /EC_number="2.7.4.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002463054.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleoside-diphosphate kinase"
                     /protein_id="HDC2864330.1"
                     /translation="MERTFLMIKPDAVQRNLIGEVISRIERKGLKLVGGKLMQVPMEL
                     AETHYGEHQGKPFYNDLISFITSAPVFAMVVEGEDAVNVSRHIIGSTNPSEASPGSIR
                     GDLGLTVGRNIIHGSDSLESAEREINLWFNENEITSYASPRDAWLYE"
     gene            7852..>7992
                     /locus_tag="O7798_002104"
     CDS             7852..>7992
                     /locus_tag="O7798_002104"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500002.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDC2864331.1"
                     /translation="MKNIISIILGILMFLKLMELLYGAIFLDKPLNPITKIIFILTLI
                     YIF"
BASE COUNT         2924 a         1049 c         1535 g         2484 t
ORIGIN      
        1 ataaaacaaa atagtaagct atgctaattt ttatacaaaa aatatgtata aacatagcaa
       61 actgtattac tttgatacaa aaatggttgt aataaatatt tatcgatatg acgacttgaa
      121 tatgataaag tgacatattt atgtatatga ctatttcgca aaatgtaatc gaggtagaat
      181 ttcttgacaa ttctgtcagt ttataagatg ttataaatat gtagtgtata aggaggcaaa
      241 caagatgact gaagaattca atgaatcaat gattaacgat attaaagaag gtgacaaagt
      301 cactggcgag gtacaacaag ttgaagacaa gcaagttgtt gttcatatca acggtggtaa
      361 atttaatggg attattccta ttagtcaact atctacgcat catattgata gcccaagtga
      421 agttgtaaaa gagggcgacg aagttgaagc atatgtcact aaagttgagt ttgatgaaga
      481 aaatgaaact ggagcttaca tcttatctag aagacaactt gaaactgaga agtcttatag
      541 ttatttacaa gaaaaattag ataataatga aatcatcgaa gcgaaagtaa cagaagtagt
      601 taaaggtggt ttggttgttg atgtaggaca aagaggtttt gttccggctt cactaatttc
      661 aacagacttc attgaggatt tctctgtgtt tgatggacaa acaattcgta ttaaagttga
      721 agaattggat cctgaaaata atagagtcat tttaagccgt aaagcagttg aacaagaaga
      781 aaacgatgct aaaaaagatc aattattaca atctttaaat gaaggcgatg ttattgatgg
      841 taaagtagcg cgtttaactc aatttggtgc atttatagac attggcggtg ttgatggttt
      901 agtgcatgta tctgaacttt ctcacgaaca tgttcaaaca ccagaagaag tagtttcaat
      961 tggtcaagat gttaaagtta aaattaaatc tattgataga gatacagaac gtatttcatt
     1021 atcaatcaaa gatacgttac caacaccttt cgaaaatatt aaaggtcaat tccacgaaaa
     1081 tgatgtcatt gaaggtgtcg tagtaagatt ggcaaacttt ggtgcatttg ttgaaattgc
     1141 accaggtgta caaggacttg tacatatttc tgaaattgca cacaaacaca ttggtacgcc
     1201 aggtgaagtg ttagaacctg gtcaacaagt aaatgttaaa atattaggta ttgatgaaga
     1261 gaatgaaaga gtatcactat ctattaaagc aacattacca aacgaagatg ttgttgaaag
     1321 tgatccttct acgactaagg cgtacttaga aaacgaagaa gaagataatc caacaattgg
     1381 cgatatgatt ggtgataaac ttaaaaatct taaactataa tttaatattt aatagtcaac
     1441 tccacatgtt tatgattgca tgtggagtat ttttatgtaa caaaatatac tcggaatgat
     1501 aacgtggaca aatttaacta agtgtttaaa aagataaagt tttaagtgct gatttttatc
     1561 attacagtaa taaactcatt ttgaatacac agtctcatgt gatattatta aaaagatata
     1621 agaaagagag gaagttagct tatgactaaa cctatagtag ctattgtagg taggcctaat
     1681 gtaggtaaat ctacaatttt taatagaata gttggagaac gtgtttcgat tgtggaagac
     1741 acgccaggtg taacacgaga tcgtatttat tcttcaggtg aatggttaac acatgatttc
     1801 aatattattg atacaggtgg tattgaaatt ggtgatgcac cattccaaac acaaattaga
     1861 gcgcaggcag aaatcgccat agatgaagcg gatgttatta tttttatggt taacgtgcgt
     1921 gaaggattga cacaaagcga tgaaatggtc gctcaaattt tatacaaatc taaaaaaccg
     1981 gtcgtattag cggttaacaa agtagataat atggaaatgc gtacagacgt gtatgatttc
     2041 tattcattag gatttgggga accgtatccg atatcagggt cacatggttt aggtcttggt
     2101 gacttgttag atgcagttgt ttctcatttt ggtgaagagg aagaagatcc ttatgatgaa
     2161 gatacaattc gactatccat tattggacga ccaaacgtag gtaaatcaag tttagtaaat
     2221 gctattttag gtgaagatcg cgttatcgtt tctaatgttg cagggacaac gagagacgct
     2281 attgatacag agtatagtta tgatggacaa gattatgttt taatcgatac tgctggtatg
     2341 cgtaaaaaag gaaaagtata tgaatcaact gagaaatatt cagtattaag agctttaaaa
     2401 gcgattgaac gttcaaatgt tgttttagtg gtcatagatg cagaacaagg catcattgaa
     2461 caagataaac gtgttgcagg atatgcacat gaacaaggta aagcagtcgt gattgtcgta
     2521 aataaatggg atactgtgga aaaagatagt aaaacgatga agaaatttga agatgaagta
     2581 cgtaaagaat tccaattttt agattatgca caaattgctt ttgtgtctgc taaagaacgc
     2641 acaagattac gtacattatt cccttacatc aatgaagcaa gtgaaaacca taaaaaacgt
     2701 gttcaaagtt caactttaaa tgaagttgtt actgatgcaa tttccatgaa ccctacacca
     2761 acagacaaag gtagacgttt gaatgtcttt tatgcaacac aagttgctat agaaccaccg
     2821 acatttgttg tatttgttaa tgatgtagaa ttaatgcatt tttcttataa acgctattta
     2881 gagaatcaaa tccgtgccgc ttttggtttt gaaggtacac caattcatat tatagctcga
     2941 aagagaaatt aacgattggg ggataacaat gactaaaatt accgtttttg gtatgggaag
     3001 ttttgggaca gcccttgcca atgttcttgc agaaaatgga catgatgttt tgatgtgggg
     3061 taaaaatcaa gatgctgttg atgaattaaa tacatgtcat acaaataaaa agtatttaaa
     3121 atacgcgaaa ttagatgtta acatcatcgc tacttcagat atgaccaaag caattcaatt
     3181 tgcagatatt tacttaatgg ctttacctac taaagcaatg cgagaagttg cttctcaaat
     3241 taatgataag ctgacctcta aaaagacttt tatacatgtt gctaaaggta ttgaaaatgg
     3301 gacgtttaaa cgtgtgtcag aaatgattga agattctatt tcacctgaat ataatgcagg
     3361 tattggcgtg ttgtcagggc caagtcatgc ggaagaagtt gtagtcaagc aaccaactac
     3421 agttgctgct tcatcaaaag ataaaagtgt aagtaaatta acgcaagatt tatttatgaa
     3481 tgattatttg cgtgtgtaca cgaatgatga cttgattggt gttgaacttg gtggtgcatt
     3541 gaaaaatatc atcgcagtag caagtggtat cgtagctgga attggctacg gtgataatgc
     3601 aaaagctgca ttaatgactc gtggcttagc ggaaattagt agattaggtg aaaagttagg
     3661 tgccgatcct atgacatttc taggtttagg tggtatcggt gacttaatcg ttacttgcac
     3721 atcaacacat tctcggaatt tcacattagg atataaactt ggacaaggtg aatcaatgga
     3781 tcaagcatta tctgaaatga atatggttgt tgaaggtatt tatacaacta aatcagttta
     3841 tcatttagct aaagaaaaaa atgtggatat gccaattaca aatgcattat atagagtatt
     3901 atttgaaaat atctcagtaa aagaatgcgt aaaagattta atggagcgcg ataaaaaatc
     3961 tgaataaaat gtgtattatt acacatatac ggctaataat tacgtaaaat gaatagaaat
     4021 ggcttaaatt caacgttttt gccacataaa tgattgcgat ttatgtaatg cttgtgttaa
     4081 agttttacca taatgatata aacatatcat tatcaaacct caggaggtga atgtctaatg
     4141 aacaaaacag atttaatcaa tgcagttgca gagcaagctg atttaactaa aaaagaagct
     4201 ggttcagcag tagatgctgt attcgaatca atccaaaact cacttgctaa aggtgaaaaa
     4261 gtacaattaa ttggtttcgg taactttgag gtacgtgaac gtgctgcacg taaaggtcgt
     4321 aaccctcaaa ccggtaaaga aattgatatc ccagcaagta aagttccagc attcaaagct
     4381 ggtaaagcat taaaagatgc tgtaaaataa ttttacttaa aaagccctga ataagggctt
     4441 tttattttgc ttttaatact tacaacctgt acataaattg taatgttctt ctaagttttt
     4501 aatctttgga acattcattg tttaagcgtt caaaatatta catgacataa tagttttgat
     4561 aaaaatagca actacaaaat atacatatga atattgagat taattgttag cgttgaattt
     4621 acttaaaagg taaccatgtc tactatagta ttttacgtta tttaaaaaga tgaataatgt
     4681 aaatgaagta aaggttatta tgagaattac aaaagctaca taaattactg ttagtttaaa
     4741 ttgaaattta aaaatgataa gtaatcttaa tgcttcaaaa gattttaatt tcttacatat
     4801 aatgttaata tgaatagtga taatatcgtg aggtgtagac atggaaacaa ctgttagcaa
     4861 attggaaaga caaatagaag aaagattaaa gggcgtatca gaatatgaat ccattaatat
     4921 taatcatcgg ttaggtaagt tacttgattt atatgatatt ccagatgttg ccaaagtggc
     4981 atgcctcaca attgacacat caatgagaca ccttgatgac attacatata atcatttgtc
     5041 taaacattcc attttgattg gagatttaat tagtgcacat ttttatacgc tactagcaga
     5101 aatcaatgat ttatcatttc aaaatgaaat tagtaaagca attgttgaaa ttaatgaatt
     5161 gaaatcttca ttacatcatc aagctttaaa tgattatgaa atttctcaag caatagtaaa
     5221 aattgaaaca cttttcccat atattacgtt atctcatttc ggtatcaata ttgatgagtc
     5281 ggaaatatat aattatttat ttgaagatat gtctgattac tatccatcat acttcaagaa
     5341 atataatcaa agtgaagtaa agcattactt acacgatatc caaaaaagtt atttaaaaag
     5401 tagaggtaat taagcatggc tgacaataaa gcaaataaag agcaagtaca tcgcgttttt
     5461 caaaatattt caaaaaaata tgatagatta aataatatta ttagttttga gcagcataaa
     5521 gtatggagaa aacgcgtcat gaaagacatg ggtgttagaa aagggacgaa agcattagat
     5581 gtttgttgtg gtactggtga ttggacaatc gcattaagca aagctgtagg accaacaggt
     5641 gaagttactg gtattgactt tagtgagaat atgttagaag taggaaaaga aaaaactgct
     5701 tcaatggaaa atgttaaact tgttcatggt gatgcaatgg aattgccgtt tgaagacaat
     5761 tcttttgatt atgtaacaat tgggtttgga ttaagaaatg tgccagacta tttagtcgcg
     5821 ttaaaagaaa tgaatagagt acttaaacca ggtggtatgg tggtatgtct tgaaacgagc
     5881 caaccaactt tgccagtctt taaacaaatg tatgcactat actttaaatt tgttatgcct
     5941 atttttggaa aattatttgc aaaatcaaaa gaagaatatg aatggttaca gcaatctacg
     6001 tttaattttc ctggaaaaga agagttgaag cgcatgtttg aagaagcagg tttcataaat
     6061 gtaagagtac gtagttttac agggggcgtt gctgcaatgc accttggcta taaagaaaaa
     6121 gataatacca aaggtgatta acgtggcaaa gttaaacatg aacaatgaaa ttaagaaagt
     6181 ggaacaacga cttgaaaagg caataaaaag taaagattct gtattagaac aggcatcatt
     6241 acacttattg tcttctggtg gtaaaagagt acgcccagca tttgttattc tgagtagcca
     6301 atttggcaaa gatgaacaaa cgtctgaaca aacgtatcaa gttgcagtcg cattagagtt
     6361 aattcatatg gcaacacttg ttcatgatga cgttattgat aaaagcgaca agcgtcgagg
     6421 caagttaacc atatcaaaga aatgggatca gacaactgct attttaactg ggaatttttt
     6481 attggcatta ggacttgaac acttaatggc cgttaaagat aatcgtgtac atcaattgat
     6541 atctgaatct atcgttgatg tttgtagagg ggaacttttc caatttcaag accaatttaa
     6601 cagtcaacag acaattatta attatttacg acgtatcaat cgcaaaacag cactgttaat
     6661 tcaaatatca actgaagttg gtgcaattac ttctcaatct gataaagaga ctgtacgaaa
     6721 attgaaaatg attggtcatt atataggtat gagcttccaa atcattgatg atgtattaga
     6781 cttcacaagt accgaaaaga aattaggtaa gccggtcgga agtgatttgc ttaatggtca
     6841 tattacgtta ccgattttat tagaaatgcg taaaaatcca gacttcaaat tgaaaatcga
     6901 acagttacgt cgtgatagtg aacgcaaaga atttgaagaa tgtatccaaa tcattagaaa
     6961 atctgacagc atcgatgagg ctaaggcagt aagttcgaag tatttaagta aagctttgaa
     7021 tttgatttct gagttaccag atggacatcc gaaatcacta cttttaagtt tgacgaaaaa
     7081 aatgggttca agaaacacgt agtatttatg aaaagtattg aaagcgcttt accaacctgt
     7141 taatatataa tagtaatata cataaaccta ttaaacacag ggggatacat aaagtggaac
     7201 gtacattttt aatgattaaa ccagatgcag tacaaagaaa tctaattggt gaagtaattt
     7261 caagaattga aagaaaagga ctaaaacttg tcggtggtaa attaatgcaa gtaccaatgg
     7321 aacttgctga aacacattat ggtgaacacc aaggtaaacc attttataat gatttaattt
     7381 catttattac atcagcacca gtgttcgcaa tggtagttga aggtgaagat gcagttaatg
     7441 tatctagaca tattattggc agcaccaatc cttcagaagc ttcaccagga tcaattagag
     7501 gtgatttagg tttaactgtt ggtagaaata tcattcacgg ttcagattca ttagagtctg
     7561 ctgaacgtga aattaatcta tggtttaatg aaaatgaaat tactagctat gcttcaccac
     7621 gtgatgcatg gttatatgaa taaaatataa actgtaaacc tttacgattt atttataaag
     7681 gtagaaaggg ttttgttatg tggttagtca ttatgattat acataacaag gcccgttttt
     7741 tatgttgtag taaattactt gaaaaatttt atagtttttt ggtaacacgt attaaaaaga
     7801 gaggaatatt ctttatcaaa tgaaactaaa cagagagaag gggttgttaa aatgaagaat
     7861 attatttcga ttattttggg gattttaatg ttcttaaaat taatggaatt actatatggt
     7921 gctatatttt tagataaacc acttaatcct ataacaaaaa ttatttttat actgactctc
     7981 atttatattt tt
//
LOCUS       DALPQQ010000110         7900 bp    DNA     linear   BCT 22-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus strain K18-6-464
            SAMD00233528-rid16434743.denovo.110, whole genome shotgun sequence.
ACCESSION   DALPQQ010000110 DALPQQ010000000
VERSION     DALPQQ010000110.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMD00233528
            Sequence Read Archive: DRR236061
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 7900)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7900)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001543423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001543423.1
            Genome Coverage       :: 77x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/22/2022 17:09:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,811
            CDSs (total)                      :: 2,743
            Genes (coding)                    :: 2,689
            CDSs (with protein)               :: 2,689
            Genes (RNA)                       :: 68
            rRNAs                             :: 2, 4, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 4, 2 (16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 54
            CDSs (without protein)            :: 54
            Pseudo Genes (ambiguous residues) :: 0 of 54
            Pseudo Genes (frameshifted)       :: 27 of 54
            Pseudo Genes (incomplete)         :: 27 of 54
            Pseudo Genes (internal stop)      :: 10 of 54
            Pseudo Genes (multiple problems)  :: 10 of 54
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7900
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMD00233528-rid16434743.denovo.110"
                     /strain="K18-6-464"
                     /db_xref="taxon:1280"
                     /geo_loc_name="Japan: Niigata"
     gene            complement(<1..1296)
                     /locus_tag="O7798_002105"
     CDS             complement(<1..1296)
                     /locus_tag="O7798_002105"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499856.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid permease"
                     /protein_id="HDC2864332.1"
                     /translation="MEDNKMNRSLNSRHISMIAIGGAIGTGLFVATGNIISQAGPGGA
                     ILAYLVIGVMLYFLMSSIGELATFYPVSGSFSSYSTRFIDSSLGFTMGWLYWALWSLV
                     TSVDVIVASNVLYFWDTFKFFHPITWSLIFITILLLLNIFSVKSFGETEFWLSLIKVL
                     TIIVFVIFGFLMIFGILGGHTYGFENYTKGQAPFVGGISGFLGVLLVAGFSVGGTEVV
                     AVTAGESDDPKKSMPKAIKQVFWRILLFYVLSIAVIGAIIPYTDPSLLRASSSISQSP
                     FTIVFDRVGIAFAASVINAVILTSLLSAANSGVYTTGRMLYSLSSDKKAPQFLSKLNK
                     TTKLPLRALLTTYAVVVIVIIYANFNSNAVFNLLEIIGSMIIVVWGSSIWSQIRLRQA
                     IKKQGQDPNKVLPYKAPFYPLGPIIVITTLLFLLFGGSVE"
     gene            1500..3017
                     /locus_tag="O7798_002106"
     CDS             1500..3017
                     /locus_tag="O7798_002106"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000082539.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="catalase"
                     /protein_id="HDC2864333.1"
                     /translation="MSQQDKKLTGVFGHPVSDRENSMTAGPRGPLLMQDIYFLEQMSQ
                     FDREVIPERRMHAKGSGAFGTFTVTKDITKYTNAKIFSEIGKQTEMFARFSTVAGERG
                     AADAERDIRGFALKFYTEEGNWDLVGNNTPVFFFRDPKLFVSLNRAVKRDPRTNMRDA
                     QNNWDFWTGLPEALHQVTILMSDRGIPKDLRHMHGFGSHTYSMYNDSGERVWVKFHFR
                     TQQGIENLTDEEAAEIIATDRDSSQRDLFEAIEKGDYPKWTMYIQVMTEEQAKNHKDN
                     PFDLTKVWYHDEYPLIEVGEFELNRNPDNYFMDVEQAAFAPTNIIPGLDFSPDKMLQG
                     RLFSYGDAQRYRLGVNHWQIPVNQPKGVGIENICPFSRDGQMRVVDNNQGGGTHYYPN
                     NHGKFDSQPEYKKPPFPTDGYGYEYNQRQDDDNYFEQPGKLFRLQSEDAKERIFTNTA
                     NAMEGVTDDVKRRHIRHCYKADPEYGKGVAKALGIDINSIDLETENDETYENFEK"
     gene            3108..3257
                     /gene="rpmG"
                     /locus_tag="O7798_002107"
     CDS             3108..3257
                     /gene="rpmG"
                     /locus_tag="O7798_002107"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001265708.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L33"
                     /protein_id="HDC2864334.1"
                     /translation="MRVNVTLACTECGDRNYITTKNKRNNPERIEMKKYCPRLNKYTL
                     HRETK"
     gene            3711..3980
                     /gene="rpsN"
                     /locus_tag="O7798_002108"
     CDS             3711..3980
                     /gene="rpsN"
                     /locus_tag="O7798_002108"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009384394.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S14"
                     /protein_id="HDC2864335.1"
                     /translation="MAKKSKIAKERKREELVNKYYELRKELKAKGDYEALRKLPRDSS
                     PTRLTRRCKVTGRPRGVLRKFEMSRIAFREHAHKGQIPGVKKSSW"
     gene            4137..5114
                     /gene="guaC"
                     /locus_tag="O7798_002109"
     CDS             4137..5114
                     /gene="guaC"
                     /locus_tag="O7798_002109"
                     /EC_number="1.7.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015365036.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GMP reductase"
                     /protein_id="HDC2864336.1"
                     /translation="MKIFDYEDIQLIPNKCIVESRSECDTTIQFGPKKFKLPVVPANM
                     QTVMNEKLAKWFAENDYFYIMHRFDEEARIPFIKHMQNSGLFASISVGVKKAEFDFIE
                     KLAQEKLIPEYITIDIAHGHSDSVINMIKHIKTHIPDSFVIAGNVGTPEGVRELENAG
                     ADATKVGIGPGRVCITKIKTGFGTGGWQLAALNICSKAARKPLIADGGIRTHGDIAKS
                     IRFGASMVMIGSLFAAHEESPGETVELDGKQYKEYFGSASEFQKGEHKNVEGKKMFVE
                     HKGSLMDTLKEMQQDLQSSISYAGGKDLKSLRTVDYVIVRNSIFNGDRD"
     gene            5136..6152
                     /locus_tag="O7798_002110"
     CDS             5136..6152
                     /locus_tag="O7798_002110"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001789887.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CAP domain-containing protein"
                     /protein_id="HDC2864337.1"
                     /translation="MKKFIVTVVAFLSIIIIAPITEFKPFIHLQNEVRQYIDIHINKE
                     TISAENKLDTPKKQQFAFNNIQMNMSKSDVEKTLNKPKRVTFNEYGTKWYTYYDDDYN
                     NFIMISYMKDKVNALYTNQNIITSKSKIKYNTPKSVVRQRLGEPETEIVKGRVRYEQN
                     NKEYDVFHKNHIYTTVFYDKHRRNNVTAVLQVSDAMENRLKEQYGAPSKSLADSFELQ
                     NFDLVNAERKQHQLSTLKYSKQNSETARKHSKDMANNHYFDHTNLKGQSPFDRLKKDG
                     ITFNSAGENLAYGQVSSIYAHQGLMNSIGHRKNILNDTFKILGVGVDFNDEKQPFWTE
                     NYTG"
     gene            complement(6532..7155)
                     /gene="lexA"
                     /locus_tag="O7798_002111"
     CDS             complement(6532..7155)
                     /gene="lexA"
                     /locus_tag="O7798_002111"
                     /EC_number="3.4.21.88"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499863.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional repressor LexA"
                     /protein_id="HDC2864338.1"
                     /translation="MRELTKRQSEIYNYIKQVVQTKGYPPSVREIGEAVGLASSSTVH
                     GHLSRLEEKGYIRRDPTKPRAIEIVSDQTNDNINMEETIHVPVIGKVTAGVPITAVEN
                     IEEYFPLPEHLTSTHNSDIFILNVVGDSMIEAGILDGDKVIVRSQTIAENGDIIVAMT
                     EEDEATVKRFYKEKNRYRLQPENSTMEPIYLDNVAVIGKVIGLYREM"
     gene            7298..7531
                     /locus_tag="O7798_002112"
     CDS             7298..7531
                     /locus_tag="O7798_002112"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499864.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDC2864339.1"
                     /translation="MFYNKYKNVSTYIIIFLVSSAAFAIFLLSANISAHSEQVYEMTD
                     HQIKNNTINKAYEHKDPTNNSEQRDGKVFALIN"
     gene            7667..>7900
                     /locus_tag="O7798_002113"
     CDS             7667..>7900
                     /locus_tag="O7798_002113"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499865.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF896 domain-containing protein"
                     /protein_id="HDC2864340.1"
                     /translation="MSNSDLNIERINELAKKKKEVGLTQEEAKEQTALRKAYLESFRK
                     GFKQQIENTKVIDPEGNDVTPEKIKEIQQKRDNK"
BASE COUNT         2931 a         1128 c         1393 g         2448 t
ORIGIN      
        1 ttcaactgag ccaccaaata gcaagaataa tagtgtagtg atgacaatga ttggtcctaa
       61 tggataaaaa ggtgctttat atggtaggac cttattaggg tcttgacctt gttttttaat
      121 agcttgtcgc aatcgtattt gtgaccaaat gcttgatccc caaacaacta taatcattga
      181 accaataatt tcaagtaaat taaaaacggc atttgaatta aagtttgcat aaataataac
      241 aataacaacg actgcataag tagttaataa tgctcttaaa ggtaacttag ttgtcttgtt
      301 taatttactt aaaaattggg gtgctttttt gtctgaactt aaggaataca acattctgcc
      361 tgttgtataa acacctgaat ttgcagcgga taataatgaa gttaaaataa ccgcgttgat
      421 tactgatgct gcaaaggcta tgcctactct atcgaataca attgtaaatg ggctttgact
      481 tattgaacta cttgctctta ataatgatgg atctgtgtac ggaataattg caccaattac
      541 tgcaattgat aagacataga ataaaagaat acgccaaaat acttgtttaa ttgccttagg
      601 catagacttt ttagggtcat ctgattcacc agcagttact gctactactt ctgtaccacc
      661 aaccgaaaat ccggcgacta ataatacgcc taagaaacca gagataccac caacaaacgg
      721 tgcttggcct tttgtatagt tttcaaatcc atatgtatga ccacctaaga taccgaaaat
      781 cattaaaaag ccaaaaataa cgaatacgat aattgttaac actttaatca atgataacca
      841 aaactcagtt tctccaaatg attttacaga aaaaatgttt aataatagta aaattgtaat
      901 aaagattaag ctccaagtaa tggggtggaa aaatttaaat gtgtcccaga aataaagcac
      961 atttgacgct actatgacat caacacttgt aactaatgac cacaatgccc aatacaacca
     1021 tcccatggta aagccaagag atgagtcaat aaagcgtgtt gaataagagc tgaatgaacc
     1081 tgatactgga taaaatgttg ccaactctcc aattgatgac attaagaaat atagcatgac
     1141 accaataaca agataagcga gtatagcgcc tccaggacca gcttgagaaa tgatattacc
     1201 agtagctaca aatagaccag tcccaattgc accacctata gcaatcatgg aaatgtgtct
     1261 tgagttaaga ctacggttca ttttattatc ttccatattt agtctcccat ctatttaaat
     1321 atacccatta ttgtaagctt tttaagtgta ctattcaata actatttagt actgtaaagc
     1381 gaaaaaatta aaattttctg attttttaat catcttgagc atgtttaatt gtaattttga
     1441 tggggttaaa ttataatatg tattaaatta taattattat aaattgtgga gggatgacta
     1501 tgtcacaaca agacaaaaag ttaactggtg tttttgggca tccagtatca gaccgagaaa
     1561 atagtatgac agcagggcct aggggacctc ttttaatgca agatatttac tttttagagc
     1621 aaatgtctca atttgataga gaagtaatac cagaacgtcg aatgcatgcc aaaggttctg
     1681 gtgcatttgg gacatttact gtaactaaag atataacaaa atatacgaat gctaaaatat
     1741 tctctgaaat aggtaagcaa accgaaatgt ttgcccgttt ctctactgta gcaggagaac
     1801 gtggtgctgc tgatgcggag cgtgacattc gaggatttgc gttaaagttc tacactgaag
     1861 aagggaactg ggatttagta gggaataaca caccagtatt cttctttaga gatccaaagt
     1921 tatttgttag tttaaatcgt gcggtgaaac gagatcctag aacaaatatg agagatgcac
     1981 aaaataactg ggatttctgg acgggtcttc cagaagcatt gcaccaagta acgatcttaa
     2041 tgtcagatag agggattcct aaagatttac gtcatatgca tgggttcggt tctcacacat
     2101 actctatgta taatgattct ggtgaacgtg tttgggttaa attccatttt agaacgcaac
     2161 aaggtattga aaacttaact gatgaagaag ctgctgaaat tatagctaca gatcgtgatt
     2221 catctcaacg cgatttattc gaagccattg aaaaaggtga ttatccaaaa tggacaatgt
     2281 atattcaagt aatgactgag gaacaagcta aaaaccataa agataatcca tttgatttaa
     2341 caaaagtatg gtatcacgat gagtatcctc taattgaagt tggagagttt gaattaaata
     2401 gaaatccaga taattacttt atggatgttg aacaagctgc gtttgcacca actaatatta
     2461 ttccaggatt agatttttct ccagacaaaa tgctgcaagg gcgtttattc tcatatggcg
     2521 atgcgcaaag atatcgatta ggagttaatc attggcagat tcctgtaaac caacctaaag
     2581 gtgttggtat tgaaaatatt tgtcctttta gtagagatgg tcaaatgcgc gtagttgaca
     2641 ataaccaagg tggaggaaca cattattatc caaataacca tggtaaattt gattctcaac
     2701 ctgaatataa aaagccacca ttcccaactg atggatacgg ctatgaatat aatcaacgtc
     2761 aagatgatga taattatttt gaacaaccag gtaaattgtt tagattacaa tcagaggacg
     2821 ctaaagaaag aatttttaca aatacagcaa atgcaatgga aggcgtaacg gatgatgtta
     2881 aacgacgtca tattcgtcat tgttacaaag ctgacccaga atatggtaaa ggtgttgcaa
     2941 aagcattagg tattgatata aattctattg atcttgaaac tgaaaatgat gaaacatacg
     3001 aaaactttga aaaataaatt tgatatgtag tttctatatt gcgtagttga gcagtttatg
     3061 atatcataat aaatcgtaaa gattcctaac aagagagggt gtttaacgtg cgcgtaaacg
     3121 taacattagc atgcacagaa tgtggcgatc gtaactatat cactactaaa aataaacgta
     3181 ataatcctga gcgtattgaa atgaaaaaat attgcccaag attaaacaaa tatacgttac
     3241 atcgtgaaac taagtaattc ttatcattca aatacgacga tttgaaaata aagcgggctt
     3301 acctattata ttggggagct cgctttttta tgaaattttt gtgaagagtg attaatggat
     3361 tgagtttcat cggtagaaca atatatgatt atattagttg ttactttatt aaaatttgag
     3421 aatatttata gaaggaaata gattactgat tttataaagt cactttgtta gcgaatgctt
     3481 gaaagagtat ttaatatagt agaatttaaa atttcaaagc ggaatttaat aagtacgaag
     3541 taattctggg tatgttttat aaatgttcga taatacactt taatcttaaa tatgatggtt
     3601 tagaaaatga tttaacaaag aaatgaaact ttactgttga attatgtgag gattgtgtta
     3661 ttatataaat cgtaataatt acgatttgat aaaaagtgag gtaactatat atggctaaga
     3721 aatctaaaat agcaaaagag agaaaaagag aagagttagt aaataaatat tacgaattac
     3781 gtaaagagtt aaaagcaaaa ggtgattacg aagcgttaag aaaattacca agagattcat
     3841 cacctacacg tttaactaga agatgtaaag taactggaag acctagaggt gtattacgta
     3901 aatttgaaat gtctcgtatt gcgtttagag aacatgcgca caaaggacaa attccaggtg
     3961 ttaaaaaatc aagttggtaa aatcaaattt cgtactttag cccatttaca atatcaataa
     4021 aacaatgtac agtatatacg aatgctataa actgaatgtt ttctcatatt aataaggaaa
     4081 cattcggttt ttaatttgca tttaaaaata attagttttt aaaggggcta tttaaagtga
     4141 aaatatttga ttacgaagat attcaattaa tacctaataa atgcatagtt gaaagtaggt
     4201 ctgaatgtga tacaactatc caatttggtc cgaaaaaatt caagctacct gtagttcctg
     4261 caaatatgca aacagttatg aatgagaaat tagcgaaatg gtttgctgaa aatgattact
     4321 tttatatcat gcatcgtttt gatgaagaag caagaatacc ttttataaaa catatgcaaa
     4381 attcaggctt atttgcatct atttcagttg gtgtaaagaa agcggaattt gattttattg
     4441 aaaagttagc tcaagaaaaa ttaatccccg aatatattac aatagatatt gcgcatggtc
     4501 actcagattc agtgataaac atgattaaac atataaaaac ccatatacct gatagttttg
     4561 ttattgctgg taatgttggt acgccagaag gtgttagaga attagaaaat gctggtgctg
     4621 atgctaccaa agtcggtata ggtcctggta gagtttgtat tacaaagatt aaaacaggtt
     4681 ttggtactgg tggttggcag ttagcggcat taaacatatg tagtaaagca gctcgtaaac
     4741 ctttgattgc cgatggtggt ataagaacgc atggcgacat tgctaaatca attagatttg
     4801 gtgcatcaat ggtcatgatt ggttcattat ttgcggcaca cgaagaatca cctggtgaaa
     4861 ctgtagaact tgatggtaaa cagtataaag aatattttgg tagtgcatct gaatttcaaa
     4921 aaggcgaaca taaaaatgta gaaggtaaaa aaatgtttgt agaacataag ggttcattaa
     4981 tggatacctt aaaagaaatg caacaagatt tacaaagctc aatttcatat gccggtggaa
     5041 aagacttgaa atcattacgt actgtagatt atgttattgt tagaaactct attttcaacg
     5101 gtgatagaga ttaatattta tagtaggtga tgtaaattaa aaaattcata gtaactgttg
     5161 ttgcgttttt atcaattatt atcattgcgc caataacaga atttaaacca ttcattcatt
     5221 tacaaaatga agtaagacaa tatattgaca ttcacatcaa taaagaaaca atttctgcgg
     5281 aaaataaatt ggatacaccg aagaaacaac aatttgcctt taataatata caaatgaaca
     5341 tgtcgaaatc agatgttgag aaaacattaa ataaaccaaa aagagtgaca tttaatgaat
     5401 atggtacgaa gtggtatacg tattatgatg acgattacaa taattttata atgataagtt
     5461 acatgaaaga taaagttaat gcgttatata caaatcaaaa tataatcact tcaaaatcaa
     5521 aaattaaata caatacacct aaatcggttg taaggcaaag attaggcgaa ccagaaacag
     5581 agattgttaa aggtagagtg cgttacgaac aaaataataa agaatatgat gttttccata
     5641 aaaatcacat ttatacgacg gtattttatg ataagcatcg acgtaataat gtaacagctg
     5701 ttttacaagt aagtgatgct atggaaaata gattaaaaga acaatatgga gcaccatcga
     5761 aatcgcttgc agatagtttt gaactacaaa attttgattt agttaatgct gaaagaaaac
     5821 aacatcaatt atctacattg aagtattcta aacagaattc tgaaactgca cgtaagcata
     5881 gtaaagatat ggccaacaat cattattttg atcatacaaa tttaaaaggt caatcaccat
     5941 ttgatcgatt gaaaaaagat ggtattacat ttaactcagc cggagagaat ttagcatatg
     6001 gtcaagttag tagtatctat gcacatcaag gattaatgaa ttctattggt cacagaaaaa
     6061 atattttaaa tgatacgttt aaaatattag gtgttggtgt tgattttaat gatgaaaaac
     6121 aacctttttg gacagaaaat tatactggtt aatgtttttg gcatgagatt aaagggtaat
     6181 gtttgtctgt aaggaagtag ataaacatga tgacaacaga taaaccaaaa gatgcggata
     6241 tacttgaacg cgtcaaagat atacttaata aaaaagaaag aaaaaaataa taatggctcg
     6301 ctcctgtaaa ttattacggg ggcgagtttt aatttgtgta acattttgca gaaatctgta
     6361 attcaaaatt tatattaaag aatgagatta tctaacaatt cgcaatttct gtttgaactg
     6421 aatttagatt agaataaata aaacctcttg aaaacgtaac tttttcaaga ggtccaaaat
     6481 ttataaaaat gagggcttaa caattacgat aatatataac ggtttaaaat attacatttc
     6541 gcggtacaaa ccaattactt tcccaattac agcaacattg tctaggtaaa ttggctccat
     6601 tgtactattt tcaggttgta atcgataacg atttttttct ttatagaagc gtttgacagt
     6661 tgcttcatct tcctcagtca tagcaacaat aatgtctcca ttttctgcta tggtttgact
     6721 gcgaacaatt actttgtctc cgtctaatat accagcctca atcatactgt cgcctacgac
     6781 gtttaatatg aatatgtcgc tattgtgtgt cgatgttaag tgttcaggta atggaaaata
     6841 ttcttcaata ttttctactg cggtaatagg aacacctgct gtgactttac caataactgg
     6901 cacatgaatc gtttcttcca tattaatatt atcatttgtt tgatcactta caatttctat
     6961 agcacgtggt ttcgttggat ctcttcttat atagcctttt tcttcaagac gtgaaaggtg
     7021 accatgaaca gttgaactgg atgctaagcc aactgcttca ccaatttcgc gaacactagg
     7081 cggataacct ttcgtttgaa caacttgttt aatatagtta tatatttcgc tttgtcgttt
     7141 tgttaattct ctcatatata ggcactccct aaattaattt aaatacagta tatcattaat
     7201 ttgaaaccaa aacaaacatt tgttcgttaa aatattgaca cagaacataa gttctgataa
     7261 attactaata caaacaaatg ttctaggagt gaaaatgatg ttttacaata aatataaaaa
     7321 cgtatcaaca tatatcatca tatttttagt ttcaagtgca gcctttgcaa tattcttgtt
     7381 aagtgcgaac attagtgctc actcggaaca agtgtacgaa atgactgacc atcaaattaa
     7441 gaacaatacg ataaataaag catacgaaca taaagaccct acaaacaata gcgaacaaag
     7501 agatgggaaa gtgttcgctt taataaattg atacattgtc acaacgttat tttgcctatt
     7561 tttgcgaaat agcgtttttt attacttttt tgctgatctt aaatttgtta tattttgtta
     7621 aagtattata atgattgaat aaacaaattg aaggtaggtt ttttaattga gtaattctga
     7681 tttgaatatc gaaagaatta acgagttagc taaaaagaaa aaagaagtag gattaactca
     7741 agaagaagca aaggagcaaa cagccttaag aaaagcttat cttgagagtt ttagaaaagg
     7801 gtttaaacaa caaattgaaa atactaaagt aattgatcca gaaggtaatg atgtaacacc
     7861 tgaaaaaatt aaagagatac aacaaaaaag agataataaa
//
LOCUS       DALPQQ010000111         7784 bp    DNA     linear   BCT 22-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus strain K18-6-464
            SAMD00233528-rid16434743.denovo.111, whole genome shotgun sequence.
ACCESSION   DALPQQ010000111 DALPQQ010000000
VERSION     DALPQQ010000111.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMD00233528
            Sequence Read Archive: DRR236061
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 7784)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7784)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001543423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001543423.1
            Genome Coverage       :: 77x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/22/2022 17:09:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,811
            CDSs (total)                      :: 2,743
            Genes (coding)                    :: 2,689
            CDSs (with protein)               :: 2,689
            Genes (RNA)                       :: 68
            rRNAs                             :: 2, 4, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 4, 2 (16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 54
            CDSs (without protein)            :: 54
            Pseudo Genes (ambiguous residues) :: 0 of 54
            Pseudo Genes (frameshifted)       :: 27 of 54
            Pseudo Genes (incomplete)         :: 27 of 54
            Pseudo Genes (internal stop)      :: 10 of 54
            Pseudo Genes (multiple problems)  :: 10 of 54
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7784
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMD00233528-rid16434743.denovo.111"
                     /strain="K18-6-464"
                     /db_xref="taxon:1280"
                     /geo_loc_name="Japan: Niigata"
     gene            <1..625
                     /locus_tag="O7798_002114"
     CDS             <1..625
                     /locus_tag="O7798_002114"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500471.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="DNA repair protein Rad50"
                     /protein_id="HDC2864341.1"
                     /translation="ATQVDEYNEQYLEMQAQVSDLSAQINHMETDTTLANLRHEYHSL
                     KNQLNDIAKDWASLSYLQSLVDEHIKQIKDKRLPQVINEAVEILKHLTDGRYTMINYN
                     EDSITVKHVNGQLYDPVELSQSTKELLYVALRISLIKVLRPYYPFPLIVDDAFVHFDK
                     KRTEKMLNYLRSLSEHYQVLYFTCVKDNIVPSKEVITLNKIEEGGKR"
     gene            622..1563
                     /gene="yhaM"
                     /locus_tag="O7798_002115"
     CDS             622..1563
                     /gene="yhaM"
                     /locus_tag="O7798_002115"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500470.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3'-5' exoribonuclease YhaM"
                     /protein_id="HDC2864342.1"
                     /translation="MRNIENLNPGDSVDHFFLVHKATQGVTAQGKDYMTLHLQDKSGE
                     IEAKFWTATKNDMATIKPEEIVHVKGDIINYRGNKQMKVNQIRLATTEDQLKTEQFVD
                     GAPLSPAEIQEEISHYLLDIENANLQRITRHLLKKYQERFYTYPAASSHHHNFASGLS
                     YHVLTMLRIAKSICDIYPLLNKSLLYSGIILHDIGKVRELSGPVATSYTVEGNLLGHI
                     SIASDEVVEAARELNIEGEEIMLLRHMILSHHGKLEYGSPKLPYLKEAEILCYIDNID
                     ARMNMFEKAYKKTDKGQFTDKIFGLENRRFYNPESLD"
     gene            complement(1684..2646)
                     /locus_tag="O7798_002116"
     CDS             complement(1684..2646)
                     /locus_tag="O7798_002116"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500469.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="foldase"
                     /protein_id="HDC2864343.1"
                     /translation="MKMINKLIVPVTASALLLGACGASATDSKENTLISSKAGDVTVA
                     DTMKKIGKDQIANASFTEMLNKILADKYKNKVNDKKIDEQIEKMQKQYGGKDKFEKAL
                     QQQGLTADKYKENLRTAAYHKELLSDKIKISDSEIKEDSKKASHILIKVKSKKSDKEG
                     LDDKEAKQKAEEIQKEVSKDPSKFGEIAKKESMDTGSAKKDGELGYVLKGQTDKDFEK
                     ALFKLKDGEVSEVVKSSFGYHIIKADKPTDFNSEKQSLKEKLVDQKVQKNPKLLTDAY
                     KDLLKEYDVDFKDRDIKSVVEDKILNPEKLKQGGAQGGQSGMSQ"
     gene            complement(2851..3408)
                     /locus_tag="O7798_002117"
     CDS             complement(2851..3408)
                     /locus_tag="O7798_002117"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500468.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3267 domain-containing protein"
                     /protein_id="HDC2864344.1"
                     /translation="MFLCKRQIDINARFGLPRIAFMSAVATIIMFLVSYEVMYFLSNT
                     PLSDRHFLIFLLLVFMTYPLHKSIHLLFFLPYRKSFKVHKLTKRKWLIFYNTYVNQPV
                     HKFYFCINLILPLIILSAMFVYLTISFPQYGHYFMFLLALNFGISITDLLYLKIIIFS
                     NYGQYIEEHSTGINILKKIKNPYHL"
     gene            complement(4141..4506)
                     /locus_tag="O7798_002118"
     CDS             complement(4141..4506)
                     /locus_tag="O7798_002118"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500467.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YtxH domain-containing protein"
                     /protein_id="HDC2864345.1"
                     /translation="MKASRILFGIGVGVAAGFVVALQGRDDKSVKNNTIDRTAPTGSK
                     SELQREFETIKQSFNDILNYGVQIKNESAEFGSSIGGEIKSLLGNFKSDINPNIERLQ
                     SHIENLQNRGEDIGNEISK"
     gene            complement(4648..5070)
                     /locus_tag="O7798_002119"
     CDS             complement(4648..5070)
                     /locus_tag="O7798_002119"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500466.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HIT family protein"
                     /protein_id="HDC2864346.1"
                     /translation="MSETIFGKILTGEIPSFKVYEDDYVYAFLDISQVTKGHTLLIPK
                     KASANIFETDEETMKHIGAALPKVANAIKRAFNPDGLNIIQNNGEFADQSVFHIHFHL
                     IPRYENDIDGFGYKWETHEDILDNDAKQQIAEQIQAQF"
     gene            5204..5944
                     /locus_tag="O7798_002120"
     CDS             5204..5944
                     /locus_tag="O7798_002120"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500465.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HDC2864347.1"
                     /translation="MTVKVEQLTGGYGKRPVIKDINFELNKGEIVGLIGLNGAGKSTT
                     IKHMLGLLTPMEGSLSISDININDDIEAYRRKLSYIPESPVIYEELTLEEHIEMTAMA
                     YDIDRDETMNRAMPLLKTFRLENELKVFPSHFSKGMKQKVMIICAFIVNPELYIIDEP
                     FLGLDPLGIQSMLDLMVEKKNEGRTVLMSTHILATAERYCDRFIILDEGEVVAFGDLE
                     ALRQQTGLHNQTLDDIYIHVTQGGDVHA"
     gene            5937..7160
                     /locus_tag="O7798_002121"
     CDS             5937..7160
                     /locus_tag="O7798_002121"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500464.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HDC2864348.1"
                     /translation="MRNQATTLFNKRLHALRKEKNYYNKFIFNGHFMVFLLILLGAFI
                     FGYGEWLKHIPTNINFSLIAAVIVALTSIFPMRPLLKEADKIFLLPFEKHMSQFMRHA
                     ILYSYFARILIQLIIVIVMFPLFYNINQHNVAFYICFGVSALIFPYVGLRLRWQWYQS
                     GLKTWQVNLISFITFALTYYLLLAPKWYIAFVMVALPVLIEFLVKKYKPGFLYPWEKM
                     IAIEHRHHMNYYKFVNMFTDVKHLKESAVRRSYLDILLPVPKGSKFNSNAMYLFLFIR
                     SFIRGRDAFNIIFRLVIIAVLLMVWLSYPLVTAIIGCLFVYIILLQMAQFYSQQAYGL
                     WPQVWPVPEEKVIKGYEQFLYRLMFVICTVFAVTFIIKHMTLFYVVLIFYIVGLLTIR
                     SIIKKLKYQETLLRD"
     gene            complement(7284..7739)
                     /gene="traP"
                     /locus_tag="O7798_002122"
     CDS             complement(7284..7739)
                     /gene="traP"
                     /locus_tag="O7798_002122"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001829811.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="signal transduction protein TRAP"
                     /protein_id="HDC2864349.1"
                     /translation="MKINNPTHQLFQFSASDTSVIFEETDGETVLKSPSIYEVIKEIG
                     EFSEHHFYCAIFIPSTEDHAYQLEKKLISVDDNFRNFGGFKSYRLLRPAKGTTYKIYF
                     GFADRHAYEDFKQSDAFNDHFSKDALSHYFGSSGQHSSYFERYLYPIKE"
BASE COUNT         2641 a         1141 c         1280 g         2722 t
ORIGIN      
        1 ggctactcaa gttgacgaat ataatgagca atatcttgaa atgcaagcac aagtcagtga
       61 tttaagtgca caaatcaatc acatggaaac tgatacaacg cttgctaatt taagacatga
      121 atatcacagt cttaaaaatc aacttaatga tatcgcaaaa gattgggcaa gtttaagtta
      181 tttacaaagt ttagttgatg aacacattaa acaaattaaa gataaacgtt tgcctcaagt
      241 tattaatgaa gcggtagaaa tattgaagca tttaacagat ggcagatata cgatgattaa
      301 ctataatgaa gattcaatta cggttaaaca tgttaatggt caattatatg atcctgttga
      361 actaagtcaa tctacaaaag aattacttta tgtagcttta cgtatcagtt taattaaggt
      421 actaagacca tattatccgt tcccattaat tgttgatgat gcatttgttc attttgataa
      481 aaaacgtact gaaaaaatgt tgaattattt acgatcatta tcagaacact atcaagtact
      541 atactttaca tgtgtaaaag ataatattgt tccatcaaaa gaagtgatta cattaaacaa
      601 aatagaggaa ggcgggaaac gatgagaaat atagagaatc taaatcccgg agattcagtt
      661 gatcactttt tcttagtgca taaagctaca cagggtgtaa cagcacaagg taaagattat
      721 atgacattac atttgcaaga taaaagtggt gaaattgaag cgaaattttg gacggctaca
      781 aaaaatgata tggcaacaat caagcctgaa gaaattgtac atgttaaagg tgacatcata
      841 aactatcgcg gaaataaaca gatgaaagtc aaccaaatta gactagcgac aactgaagat
      901 caattaaaaa cagaacaatt tgtagatggt gcacctttat caccggcaga aatacaagaa
      961 gagatttctc attatttgct agatattgaa aatgctaatt tacaacgtat cacacgtcat
     1021 ttattgaaaa aatatcaaga acgattttac acatatccag ctgctagttc tcatcatcat
     1081 aactttgcga gtggcttaag ctatcatgta ttaacgatgt tacgtattgc aaaatcaatt
     1141 tgtgacattt atccattgtt aaacaaaagt ttgttatata gtggtattat tttgcatgat
     1201 attggtaaag ttagagaatt gagtggtcct gttgcgacgt cgtatacagt cgaaggtaac
     1261 ttattaggac acatctcgat tgcgagtgat gaagtagttg aagcagctcg tgaattgaac
     1321 attgaaggag aagaaatcat gttgttaaga catatgattt tatctcatca tggtaagtta
     1381 gagtatggtt ctccaaaact gccatactta aaagaagcag aaattttatg ctatatcgat
     1441 aatatcgatg ctagaatgaa tatgtttgaa aaggcatata aaaaaactga caagggtcag
     1501 tttacagata aaatatttgg tcttgaaaat cgtagattct acaatcctga atcactcgat
     1561 taagaattaa aagatatcgg acagatgagt atactgaaac atgagctcat ctgtccgatt
     1621 tttaatgcga aaaaaccgag cggccgtggt atgatttttg aaccacggtc gctcggtttt
     1681 gtgttattgg ctcatgccgg attgtccgcc ttgtgcgcca ccttgtttaa gtttttcagg
     1741 gtttaagatt ttatcttcga caactgattt aatatcacga tctttaaagt caacatcgta
     1801 ttcttttaat agatctttgt atgcatcagt caataatttt ggattttttt gtactttctg
     1861 atcgactaat ttttctttca ggctttgttt ttcactgtta aagtctgttg gtttatcagc
     1921 tttaataata tgatatccaa agcttgattt aacaacctct gatacttcac catctttaag
     1981 cttaaatagt gctttttcaa aatctttatc agtttgtcct ttaagaacat aacctaattc
     2041 gccatctttt ttagctgaac cagtatccat tgattctttt ttagcgattt caccaaattt
     2101 acttggatct tttgaaactt ctttttgaat ttcttcagct ttttgtttcg cttctttatc
     2161 atctaagcct tctttgtcgc ttttcttaga tttaacttta attaaaatgt gtgaagcttt
     2221 cttgctgtct tctttaattt cagaatcaga gattttaatt ttatctgata gtaattcttt
     2281 atgataagca gcagtacgta aattttcttt atatttatcg gctgttaaac cttgctgttg
     2341 aagggccttt tcaaatttat ctttaccgcc gtattgcttt tgcatttttt caatttgttc
     2401 gtcaatcttc ttatcattaa ctttattttt atatttatca gctaaaattt tatttaacat
     2461 ttcagtaaat gatgcatttg caatttgatc tttaccgatt tttttcattg tatctgcaac
     2521 tgttacgtct ccagctttag aagaaattaa tgtattttct ttagagtctg tggcactagc
     2581 gccacaagcg cctaataata aagcactagc tgttaccgga acgattaatt tgtttatcat
     2641 cttcatagtt gaaactcctt tgtaagttaa tcatcgtgaa tataacatag ttttatatta
     2701 tcaccaatca ataacccatg acatcagact agagcattag gtttaggggt agaaattgat
     2761 gaaaataaaa aaacaaggtc tatatacatt tgattgtaag ctattacata gcctaaaaac
     2821 aaataataac accttgctat aattattttg ttataaatga tatggatttt taattttttt
     2881 caaaatatta atacctgtac tatgttcttc tatatattgt ccataattag aaaatataat
     2941 tatttttaaa tataataaat ctgtaatgga aataccgaaa ttcaatgcca ataagaacat
     3001 aaaataatgt ccatattgcg ggaatgaaat tgttagataa acgaacattg cagataagat
     3061 aattaacggc aatattaagt taatgcaaaa ataaaatttg tgtacaggtt gattgacgta
     3121 ggtattatag aatataagcc attttctttt agttaactta tgaactttaa acgattttct
     3181 atatggtaag aaaaataata aatgtatact tttatgtaat ggatacgtca taaatacaag
     3241 taataaaaag atgagaaaat gtctatctga taatggcgta ttagataaaa aatacattac
     3301 ttcataacta actaaaaaca taatgatggt tgcaactgca ctcataaatg caattctagg
     3361 caaaccaaat cgtgcattga tatcaatttg tcttttacat aaaaacatat cttacgcctc
     3421 atctcttttc aatataagtt agattataac taactcaggt tcagtaattc aatagtaaca
     3481 tatcatgtta gaagaattgt tatataagaa gaaaggagcg acgtattgtt tgatttgaaa
     3541 cgcgaaagtg gggattggta aaattgtctg attgactagc gtagaagtag aatgcagaac
     3601 aaatttctgc gaacacatat tcttgctaat aaagcatcac ttatgaaaaa ggcgcgtgtg
     3661 acatgagtat ttgaaaactt gaataatata aaaaatggat atggcagggc atatgcaaaa
     3721 gcatcttttg accaactaag ttatacaaat gctaaaaata tagtgatatg taattataat
     3781 aaacaccaga ttaataattt gtgcaagtaa ggtatatgta atgtgtatat aaggttcggc
     3841 tcaatgaaaa tataagtatg ttgtttgtcg ataatgattt aagtaaagcg taatcaaagt
     3901 gcaaggataa cacaatgaat cctaagcaat gttttcaatc aattcataaa tatgatttaa
     3961 gcgaaaatca ctacaaacaa tgtcttccta taatttgtaa acataagttc atttgagttt
     4021 taaaaaagag atgacaagaa atatctaatt tctaatgtca tctcgtttat ttggcattta
     4081 attttaaaaa ataaatatgc tgttactaat aaaaatagtt gtgatcgaga acgtaacctg
     4141 ctacttagaa atttcgtttc caatatcctc gccacgattt tgtaaatttt cgatgtgtga
     4201 ctgtaaacgt tcaatattag gattaatgtc agatttgaag tttccaagta atgacttaat
     4261 ttcaccacca attgaactac caaattccgc actttcgttt ttaatttgaa caccatagtt
     4321 taaaatgtca ttaaaacttt gtttaatcgt ttcaaattca cgttgtagtt ctgattttga
     4381 accagtaggg gcagtacgat cgatcgtgtt gttcttgaca cttttgtcgt cacgtccttg
     4441 aagtgcaact acaaaaccag ctgctacgcc aacaccgata ccgaatagaa tgcgtgatgc
     4501 tttcatttat attctcctca cttttaacat ctgttatctt gataactcat tttgtttaaa
     4561 attgctaacc ttgatgttat cacttcaaac gcaattgtta taatattaat catattatac
     4621 ccgttcgagc ttagattaag catacattta aaattgtgct tgaatttgtt cagcaatttg
     4681 ttgttttgca tcgttatcta aaatgtcttc atgtgtttcc cacttataac caaatccatc
     4741 aatatcattt tcgtatcgag gaattaagtg gaaatgaata tgaaatacag attgatctgc
     4801 aaactcacca ttattttgaa taatgtttaa accatcagga ttaaatgcac gcttaatagc
     4861 atttgctact ttaggtaatg ctgcaccgat atgtttcatt gtttcttcat cagtttcaaa
     4921 gatattagca gaagcttttt taggaattaa taacgtatgt cctttagtaa cttgtgatat
     4981 atctaaaaag gcatagacat aatcgtcttc atatacttta aagctaggaa tttctccagt
     5041 taaaattttg ccgaaaattg tttctgacat gatgactaca ctccttttca actagtatta
     5101 ccattcatta taacattgtc gctaaaaatt cgatattagg acatgtgtat ttaatatgag
     5161 cattttataa tttttggtac aatataagtc atggaggtgc cttatgacag ttaaagtaga
     5221 acagcttaca ggtggatatg gaaaacgccc tgtaattaaa gatataaatt ttgaattaaa
     5281 caaaggcgaa attgttggac ttattggcct taatggcgct ggtaagagta caacgattaa
     5341 acatatgcta ggattgctta cacctatgga aggatctcta tcaatttcag atatcaacat
     5401 taatgatgac atagaggctt atagaagaaa gttatcttat attccggaat caccggttat
     5461 ttatgaagaa ctcacattag aggaacacat tgagatgaca gcaatggcat atgatattga
     5521 tcgtgatgaa acgatgaatc gagcaatgcc attattaaag acattccgtt tagaaaatga
     5581 gttgaaagtt tttccgagtc atttttctaa ggggatgaaa caaaaagtca tgattatttg
     5641 tgcgtttatc gttaatcccg aattgtatat tatagacgaa ccattccttg gcctagatcc
     5701 attaggaatt caatccatgt tagatttaat ggttgaaaag aaaaacgaag gtagaaccgt
     5761 tctaatgagt acacatattt tagcaacagc tgaacgttac tgtgatcgtt ttatcatact
     5821 agacgaaggt gaagtcgttg catttggaga tttagaagca ttgagacaac aaactggctt
     5881 acataatcaa acattagacg atatatatat tcatgtgacg caaggtggag atgtacatgc
     5941 gtaaccaagc taccacatta tttaataaaa gattacatgc ccttcgtaaa gagaaaaatt
     6001 attataataa gtttatattt aatggtcatt tcatggtctt tttacttatt ttgctgggtg
     6061 catttatttt tggatatggt gaatggttaa aacatattcc aacgaatatc aatttttcat
     6121 taatagcagc agtgattgtt gcgttgacat ctatttttcc aatgcgacca ctgttaaaag
     6181 aagcggataa aatcttttta ttaccatttg aaaaacacat gtctcaattt atgcgtcatg
     6241 cgattttata tagttacttt gcgcgcatat taatccaact cattattgtt attgtaatgt
     6301 tcccgttgtt ttacaatatt aatcaacata atgtggcatt ttatatttgt tttggagtca
     6361 gtgcattaat ttttccatat gttggtttac gcttaagatg gcaatggtat caatcgggac
     6421 ttaaaacatg gcaagttaat ttaatatcat tcatcacctt tgctctaaca tattacttac
     6481 tattagctcc aaaatggtac atcgcatttg tgatggttgc tttgcctgtg ttaatagaat
     6541 ttttagttaa aaaatataaa ccaggctttt tgtatccttg ggagaaaatg attgcaatcg
     6601 aacatcgaca tcatatgaat tattataaat ttgttaatat gttcaccgat gtaaaacatt
     6661 tgaaagaatc tgcagtcaga agaagttatc tagatatact tttaccagtt ccaaagggta
     6721 gtaaatttaa ctctaatgcg atgtatttat tcttatttat tagaagcttt ataagaggga
     6781 gagacgcatt taatattatc tttaggttag taattattgc agttttatta atggtttggt
     6841 tatcatatcc attagtgaca gcaattattg ggtgtttatt tgtatatatt atattgttac
     6901 aaatggcaca attttattca cagcaagcat atggcttatg gcctcaagtg tggcctgtac
     6961 ctgaagagaa ggtaatcaaa gggtatgaac agtttttata tagattaatg tttgttattt
     7021 gtactgtgtt tgcagtgaca tttattataa aacatatgac gttattctat gttgtactca
     7081 ttttctatat tgtaggttta ttaacgatta gaagtattat taaaaagttg aaatatcagg
     7141 aaacattatt acgagactaa aaaacttcca ttggcatgta tgttgtaaag gtgcatgtaa
     7201 tgttgaacgc caaatgatac ggcgttcaga ttacattagc atctatacgt taacagcata
     7261 accaatggaa gttttcttcg aatctattct tttattgggt atagatatct ttcaaaataa
     7321 cttgaatgtt gtccgcttga accaaagtaa tgacttaatg cgtcttttga aaaatggtca
     7381 ttaaaggcat cagattgctt aaagtcttcg tatgcatgtc gatcagcaaa tccgaaataa
     7441 attttgtatg ttgtaccttt agcaggtctt aacaaacgat agcttttaaa gccaccaaag
     7501 tttctgaaat tatcgtctac actaatcagt ttcttttcaa gttgatatgc atgatcttct
     7561 gttgatggaa tgaagattgc acaatagaaa tgatgttcac tgaattcacc aatttcttta
     7621 ataacttcat atattgaagg tgattttaaa acagtctcac catcagtttc ttcaaaaata
     7681 actgaagtat ctgatgctga aaattggaat agttgatggg tcgggttatt gatttttatc
     7741 tgatgtaaaa atccataagt gccataagat gtatatagtt tctt
//
LOCUS       DALPQQ010000112         7725 bp    DNA     linear   BCT 22-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus strain K18-6-464
            SAMD00233528-rid16434743.denovo.112, whole genome shotgun sequence.
ACCESSION   DALPQQ010000112 DALPQQ010000000
VERSION     DALPQQ010000112.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMD00233528
            Sequence Read Archive: DRR236061
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 7725)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7725)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001543423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001543423.1
            Genome Coverage       :: 77x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/22/2022 17:09:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,811
            CDSs (total)                      :: 2,743
            Genes (coding)                    :: 2,689
            CDSs (with protein)               :: 2,689
            Genes (RNA)                       :: 68
            rRNAs                             :: 2, 4, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 4, 2 (16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 54
            CDSs (without protein)            :: 54
            Pseudo Genes (ambiguous residues) :: 0 of 54
            Pseudo Genes (frameshifted)       :: 27 of 54
            Pseudo Genes (incomplete)         :: 27 of 54
            Pseudo Genes (internal stop)      :: 10 of 54
            Pseudo Genes (multiple problems)  :: 10 of 54
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7725
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMD00233528-rid16434743.denovo.112"
                     /strain="K18-6-464"
                     /db_xref="taxon:1280"
                     /geo_loc_name="Japan: Niigata"
     gene            171..860
                     /locus_tag="O7798_002123"
     CDS             171..860
                     /locus_tag="O7798_002123"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500320.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metal-dependent hydrolase"
                     /protein_id="HDC2864350.1"
                     /translation="MKLSFHGQSTIYLEGNNKKVIVDPFISNNPKCDLNIETVQVDYI
                     VLTHGHFDHFGDVVELAKKTGATVIGSAEMADYLSSYHGVENVHGMNIGGKANFDFGS
                     VKFVQAFHSSSFTHENGIPVYLGMPMGIVFEVEGKTIYHTGDTGLFSDMSLIAKRHPV
                     DVCFVPIGDNFTMGIDDASYAINEFIKPKISVPIHYDTFPLIEQDPQQFKDAVNVGDV
                     QILKPGESVQF"
     gene            complement(1165..1578)
                     /locus_tag="O7798_002124"
     CDS             complement(1165..1578)
                     /locus_tag="O7798_002124"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500319.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="universal stress protein"
                     /protein_id="HDC2864351.1"
                     /translation="MYKNILLGVDTQLKNEKALKEVSKLAGEGTVVTVLNAISEQDAQ
                     ASIKAGVHLNKLTEERSKRLEKTRKALEDYGIDYDQIIVRGNAKEELLKHANSGKYEI
                     VVLSNRKAEDKKKFVLGSVSHKVAKRATIPVLIVK"
     gene            1783..3081
                     /locus_tag="O7798_002125"
     CDS             1783..3081
                     /locus_tag="O7798_002125"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500318.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CBS domain-containing protein"
                     /protein_id="HDC2864352.1"
                     /translation="MTKHEQILDYIESLSIGSKISVRKIAKFLNVSEGTAYRAIKDAD
                     KMGMVATIDRVGTVRIEKRNRNEIEHLTFNEIVNIIDGQVLGGNKGITKMVSKFAIGA
                     MELKDILKYIGPKTLLIVGNREDVQIEALKRGTAILITGGFKPSNKVINFANEHDLPV
                     LSSSYDTFLVANIINKALFNQKIRKDILIVQDIMTPLDDLSVLFDTMKIADYKRMANR
                     TGHTRFPVVNESYKLVGIVTSREMINTKDDDEIDKVMTRNPIYVNAMSTVASCAHMMI
                     WEGIELIPVVSSNKKTVGVINRQDVLKSMQLLGRQPQMGETINDQIAKYITMNQDGIT
                     VEVSPLLINHYGTVSKAAFVSIIEETIQYEMRKFKKGNVMIENLNIVYIKTVPIESHI
                     TVRFGILDVGRNFAKIEVNMHSQNDKVASALVICQMFDEV"
     gene            3342..4283
                     /gene="pde2"
                     /locus_tag="O7798_002126"
     CDS             3342..4283
                     /gene="pde2"
                     /locus_tag="O7798_002126"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500317.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pApA hydrolase Pde2"
                     /protein_id="HDC2864353.1"
                     /translation="MISTLNEIMKCIEDNDTIIIHRHVRPDPDAYGSQLGLKYYIQQK
                     FPQKQVFAVGEAESSLSFIGELDNIDDKTYQDALVIVCDTANAPRIDDERYSTGRKLI
                     KIDHHPAVDQYGDINLVNTNASSTSEIIYDLISHFNDEAIVNKDIASVLYLGIVGDTG
                     RFLFNNTSEHTMEIAGKLIGHDIDHNALLNKMMEKDPKMLPFQGYVLQHFELMDDGFC
                     QVKITEDVLEQFGIQPNEASQFVNTIADIKGLKIWVFAVDEGNEIRCRLRSKGQLIIN
                     DIAQDFGGGGHPNASGVSVDSWDEFEQLATALRTKLN"
     gene            4304..7501
                     /locus_tag="O7798_002127"
     CDS             4304..7501
                     /locus_tag="O7798_002127"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500316.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit alpha"
                     /protein_id="HDC2864354.1"
                     /translation="MVAYLNIHTAYDLLNSSLKIEDAVRLAVSENVDALAITDTNVLY
                     GFPKFYDACIANNIKPIFGMTIYVTNGLNTVETVVLAKNNDGLKDLYQLSSEIKMNAL
                     EHVSFELLKRFSNNMIIIFKKVGDQHRDIVQVFETHNDTYMDHLSISIQGRKHVWIQN
                     VCYQTRQDADTISALAAIRDNTKLDLIHDQEDFGAHFLTEKEINQLDINQEYLTQVDV
                     IAQKCDAELKYHQSLLPQYETPNDESAKKYLWRVLVTQLKKLELNYDVYLERLKYEYK
                     VITNMGFEDYFLIVSDLIHYAKTNDVMVGPGRGSSAGSLVSYLLGITTIDPIKFNLLF
                     ERFLNPERVTMPDIDIDFEDTRRERVIQYVQEKYGELHVSGIVTFGHLLARAVARDVG
                     RIMGFDEVTLNEISSLIPHKLGITLDEAYQIDDFKKFVHRNHRHERWFSICKKLEGLP
                     RHTSTHAAGIIINDHPLYEYAPLTKGDTGLLTQWTMTEAERIGLLKIDFLGLRNLSII
                     HQILTQVKKDLGINIDIEKIPFDDQKVFELLSQGDTTGIFQLESDGVRSVLKKLKPEH
                     FEDIVAVTSLYRPGPMEEIPTYITRRHDPSKVQYLHPHLEPILKNTYGVIIYQEQIMQ
                     IASTFANFSYGEADILRRAMSKKNRAVLESERQHFIEGAKQNGYHEDISKQIFDLILK
                     FADYGFPRAHAVSYSKIAYIMSFLKVHYPNYFYANILSNVIGSEKKTAQMIEEAKKQG
                     ITILPPNINESHWFYKPSQEGIYLSIGTIKGVGYQSVKVIVDERYQNGKFKDFFDFAR
                     RIPKRVKTRKLLEALILVGAFDAFGKTRSTLLQAIDQVLDGDLNIEQDGFLFDILTPK
                     QMYEDKEELPDALISQYEKEYLGFYVSQHPVDKKFVAKQYLTIFKLSNAQNYKPILVQ
                     FDKVKQIRTKNGQNMAFVTLNDGIETLDGVIFPNQFKKYEELLSHNDLFIVSGKFDHR
                     KQQRQLIINEIQTLATFEEQKLAFAKQIIIRNKSQIDMFEEMIKATKENANDVVLSFY
                     DETIKQMTTLGYINQKDSMFNNFIQSFNPSDIRLI"
BASE COUNT         2714 a         1066 c         1409 g         2536 t
ORIGIN      
        1 taaacactcc tcaacataat attacttcca ttttatgcca attattatta gatttcaaaa
       61 tcgagctaat acattaacta gattttcaat ttttaaaatt tgagaatttg ttataattaa
      121 gtggcaaaag ggtactaaat ttatatagta attgatagga ggatgctcaa atgaagttat
      181 catttcatgg tcaatcaacg atttatttag aagggaacaa caaaaaggtt atcgtagatc
      241 cgtttatttc aaataaccct aagtgtgatt tgaatattga aacagtgcag gtagactata
      301 tcgttttaac gcacggtcat tttgatcatt ttggtgatgt tgtggaacta gcaaagaaaa
      361 caggagcaac agtaattgga agtgcagaaa tggctgacta tctttcttca tatcacggtg
      421 ttgaaaatgt tcatggtatg aatattggtg gtaaagcaaa ctttgatttc ggaagcgtta
      481 aatttgttca agcatttcat agttcaagtt ttacacatga aaatggtatt ccagtttatt
      541 taggtatgcc aatgggtatc gtgtttgaag ttgaaggaaa aacaatttat catactggtg
      601 atacaggtct gtttagtgac atgtcactta ttgcgaaacg tcatccagtt gatgtatgtt
      661 ttgtaccaat tggagataat tttacgatgg gtattgatga tgcaagttat gctattaatg
      721 aatttattaa accaaaaatt tctgtaccga ttcattatga tacattccca ttaatcgaac
      781 aagatccaca acaatttaaa gatgctgtta atgtagggga cgtgcaaatt ttaaaaccag
      841 gtgaatctgt tcagttttaa atagaatata gattttacac taaaaaacac ctcgctaatc
      901 tatgtggaag ttatcgtctg catattttta gtgggtgttt ttatattcta ctgattcagt
      961 tacgacgtgg acgggggaca tcagtggttc tttatcattt ctgacctact ctcgtaattt
     1021 tagttttata caattagaca ttgattataa atttactacg atataaaaaa tccagaacca
     1081 cagtcataat cgtttcttgt atttactcag tcgtttgaga ctgcatcatg attgaaagat
     1141 tatttgtgat tctggataaa aattttattt aacgattaat acagggatag tcgcacgttt
     1201 tgctactttg tggctgacac ttccaagtac aaatttcttt ttgtcttctg ctttacggtt
     1261 acttaaaaca acaatttcgt atttaccgct attagcatgt tttaatagtt cttcttttgc
     1321 attaccacga acaattattt ggtcataatc aataccataa tcttctaaag ctttgcgtgt
     1381 tttttccaat cgcttgcttc gttcttcagt aagtttgttt aaatgaacac ctgctttaat
     1441 tgatgcttga gcatcttgtt cgctgattgc gtttaaaact gttacgactg taccttcgcc
     1501 agctaattta gacacttctt ttagtgcttt ttcatttttt aactgagtgt ctacaccaag
     1561 taatatattt ttatacatta gtacatccct cctcacttac attctaataa ataataatgg
     1621 atttttccat ttaaaattaa agattttgtg atctttgtgt ttgttgtata ttttcaaaaa
     1681 ataaaatagg tgaaacgatc attatttcat ttcacttcaa tgctttttat ccaaaataaa
     1741 gttataatgt agttaatact gttcgaaaag aagaggtaaa gaatgacaaa acatgaacaa
     1801 attttagatt atattgaatc gttatctata ggctctaaaa tttcggtgcg taaaatcgct
     1861 aaatttttaa acgtatctga agggacagca tatcgtgcaa ttaaagatgc tgataaaatg
     1921 ggcatggtcg caacgataga tcgtgttggt acggttcgaa tcgaaaaacg taatcgtaat
     1981 gaaattgaac atttaacttt taatgaaatt gtcaatatta ttgatggcca agtgttaggt
     2041 ggcaacaaag gtatcactaa gatggtatct aaatttgcaa ttggagcaat ggaactcaaa
     2101 gatattttaa agtatattgg tccaaagaca ttattgattg tcggaaatcg tgaagatgtg
     2161 cagattgaag ctttaaaaag aggtacggct atattaatta ctggtggatt taagccatct
     2221 aataaagtta ttaattttgc gaatgaacat gatttacctg ttctatcatc aagttatgat
     2281 acattcctag ttgcaaatat tatcaacaaa gcacttttta atcagaaaat acgaaaagat
     2341 atcttaatag ttcaagatat aatgacgcca ttagatgatt tatctgtgct gtttgatacg
     2401 atgaaaatag cagattataa gcgtatggcg aatcgaactg gccatacaag atttccggta
     2461 gtcaatgagt cgtataaatt agtaggtatt gtaacaagtc gagagatgat taatacaaag
     2521 gacgacgacg aaatagataa agtgatgacg cgaaatccta tttatgtaaa tgctatgagt
     2581 acagtagcaa gttgtgcgca tatgatgatt tgggaaggta ttgaattgat tcctgtcgtt
     2641 tcgagtaata aaaagacagt gggtgtgatt aatagacaag atgttttaaa gtctatgcaa
     2701 cttttaggaa gacagcctca gatgggtgaa acaattaacg atcaaatcgc caaatatata
     2761 acaatgaatc aagatggaat tacagtagaa gtttcaccac ttttaatcaa tcattacgga
     2821 acagtaagta aagcggcatt tgtaagtatt atagaagaaa caatacaata tgaaatgcgt
     2881 aaatttaaaa aaggtaatgt catgatagag aacttaaata tcgtgtatat taaaacagta
     2941 cctattgaat cacatataac agtgcgcttt ggcatactag acgtcggaag aaacttcgcc
     3001 aaaatagaag tgaacatgca tagtcaaaac gacaaagtag cgagcgctct cgtgatatgc
     3061 caaatgtttg acgaagtata ggaacttagc agagaaaata ggcataagat agatttcgca
     3121 caaacgttgg ggccccaccc caacttgcat tgtttgtaga aattaggggt ccaatttctc
     3181 tgtgttgggg cccctgaact aaatagtatg aaaatatata tatctaaata attaaaacgg
     3241 gcaaatagtt taatatggta gtaacaattt ttataattta gatattttga tatagactaa
     3301 tgcttaaatt aagcaacttt tctaaaaaag ggagtatgaa aatgattagt actttgaatg
     3361 aaattatgaa atgtatcgaa gacaacgata caattattat acacagacat gttagaccag
     3421 atcctgatgc atatggttca caacttggtt taaaatacta tattcagcag aaatttccgc
     3481 aaaagcaagt atttgcagtg ggtgaagcgg aatcatcatt aagttttatt ggagagttag
     3541 ataacattga tgataaaaca tatcaagatg cgcttgtaat tgtatgtgat actgccaatg
     3601 ctccacgaat tgacgatgaa cgttatagta caggtcgtaa acttattaaa atagatcatc
     3661 atcctgcagt tgatcagtat ggtgatatta atttagttaa tacgaacgcg tcatctacaa
     3721 gtgaaattat ttacgattta atctcacatt ttaatgatga agcaattgtt aataaagata
     3781 tcgcgagcgt tttatatctt ggtatcgtcg gtgatactgg gcgattcctt tttaacaata
     3841 cctcagaaca tactatggaa attgctggaa agttaattgg gcatgatatt gatcataatg
     3901 cgcttttaaa taaaatgatg gagaaggacc caaaaatgtt gccgtttcaa ggttatgttt
     3961 tacaacattt cgaacttatg gatgatggat tctgccaagt taaaataact gaagatgtat
     4021 tggagcaatt cggtattcag ccaaatgaag catctcagtt tgttaataca attgctgaca
     4081 tcaaaggctt gaaaatatgg gtatttgcag tcgatgaagg taatgaaatc agatgtcgat
     4141 tacgttctaa agggcaattg attattaatg atattgcgca agattttggt ggcggtggtc
     4201 atccgaatgc gtcaggagtt tcagtggaca gctgggatga atttgagcaa cttgctacag
     4261 ctttacgcac aaaacttaac taatagaaag gggccattca atcatggtgg catatttaaa
     4321 tattcatacg gcttatgatt tgttaaattc aagcttaaaa atagaagatg ccgtaagact
     4381 tgctgtgtct gaaaatgttg atgcacttgc cataactgac accaatgtat tgtatggttt
     4441 tcctaaattt tatgatgcat gtatagcaaa taacattaaa ccgatttttg gtatgacaat
     4501 atatgtgaca aatggattaa atacagtcga aacagttgtt ctagctaaaa ataatgatgg
     4561 attaaaagat ttgtatcaac tatcatcgga aataaaaatg aatgcattag aacatgtgtc
     4621 gtttgaatta ttaaaacgat tttctaacaa tatgattatc atttttaaaa aagtcggtga
     4681 tcaacatcgt gatattgtac aagtgtttga aacccataat gacacatata tggaccacct
     4741 tagtatttcg attcaaggta gaaaacatgt ttggattcaa aatgtttgtt accaaacacg
     4801 tcaagatgcc gatacgattt ctgcattagc agctattaga gacaatacaa aattagactt
     4861 aattcatgat caagaagatt ttggtgcaca ttttttaact gaaaaggaaa ttaatcaatt
     4921 agatattaac caagaatatt taacgcaggt tgatgttata gctcaaaagt gtgatgcaga
     4981 attaaaatat catcaatctc tacttcctca atatgagaca cctaatgatg aatcagctaa
     5041 aaaatatttg tggcgtgtct tagttacaca attgaaaaaa ttagaactta attatgacgt
     5101 ctatttagag cgattgaaat atgagtataa agttattact aatatgggtt ttgaagatta
     5161 tttcttaata gtaagtgatt taattcatta tgcgaaaacg aatgatgtga tggtaggtcc
     5221 tggtcgtggt tcttcagctg gctcactggt cagttattta ttgggaatta caacgattga
     5281 tcctattaaa ttcaatctat tatttgaacg ttttttaaac ccagaacgtg taacaatgcc
     5341 tgatattgat attgactttg aagatacacg ccgagaaagg gtcattcagt acgtccaaga
     5401 aaaatatggc gagctacatg tatctggaat tgtgactttc ggtcatctgc ttgcaagagc
     5461 agttgctaga gatgttggaa gaattatggg gtttgatgaa gttacattaa atgaaatttc
     5521 aagtttaatc ccacataaat taggaattac acttgatgaa gcatatcaaa ttgacgattt
     5581 taaaaagttt gtacatcgaa accatcgaca tgaacgctgg ttcagtattt gtaaaaagtt
     5641 agaaggttta ccaagacata catctacaca tgcggcagga attattatta atgaccatcc
     5701 attatatgaa tatgcccctt taacgaaagg ggatacagga ttattaacgc aatggacaat
     5761 gactgaagcc gaacgtattg ggttattaaa aatagatttt ctagggttga gaaacttatc
     5821 gattattcat caaatcttaa cacaagtcaa aaaagattta ggtattaata ttgatatcga
     5881 aaagattccg tttgatgatc aaaaagtgtt tgaattgttg tcgcaaggag atacgactgg
     5941 catattccaa ttagagtctg acggtgtaag aagtgtatta aaaaaattaa agccggaaca
     6001 ctttgaagat attgttgctg taacttcttt gtatagacca ggtccaatgg aagaaattcc
     6061 aacttacatt acaagaagac atgatccaag caaagttcaa tatttacatc cgcatttaga
     6121 acctatatta aaaaatactt acggtgttat tatttatcaa gagcaaatta tgcaaatagc
     6181 gagcacattt gcaaacttca gttatggtga agcggatatt ttaagaagag caatgagtaa
     6241 aaaaaataga gctgttcttg aaagtgagcg tcaacatttt atagaaggtg caaagcaaaa
     6301 tggttatcac gaagacatta gtaagcaaat atttgatttg attctgaaat ttgctgatta
     6361 tggttttcct agagcacatg ctgtcagcta ttctaaaatt gcatacatta tgagcttttt
     6421 aaaagtccat tatccaaatt atttttacgc aaatatttta agtaatgtta ttggaagtga
     6481 gaagaaaact gctcaaatga tagaagaagc aaaaaaacaa ggtatcacta tattgccacc
     6541 gaatattaac gaaagtcatt ggttttataa accttcccaa gaaggcattt atttatcaat
     6601 tggtacaatt aaaggtgttg gttatcaaag tgtgaaagtg attgttgatg aacgttatca
     6661 gaacggcaaa tttaaagatt tctttgattt tgctagacgt ataccgaaga gagtcaaaac
     6721 gagaaagtta cttgaagcac tgattttagt gggagcgttt gatgcttttg gtaaaacacg
     6781 ttcaacgttg ttgcaagcta ttgatcaagt gttggatggc gatttaaaca ttgaacaaga
     6841 tggtttttta tttgatattt taacgccaaa acagatgtat gaagataaag aagaattgcc
     6901 tgatgcactt attagtcagt acgaaaaaga atatttagga ttttatgttt cgcaacaccc
     6961 agtagataaa aagtttgttg ccaaacaata tttaacgata tttaaattga gtaacgcgca
     7021 gaattataaa cctatattag tacagtttga taaagttaaa caaattcgaa ctaaaaatgg
     7081 tcaaaatatg gcattcgtca cattaaatga tggcattgaa actttagatg gtgtgatttt
     7141 ccctaatcag tttaaaaagt acgaagagtt gttatcacat aatgacttgt ttatagttag
     7201 cgggaaattt gaccatagaa agcaacaacg tcaactaatt ataaatgaga ttcagacatt
     7261 agccactttt gaagaacaaa aattagcatt tgccaaacaa attataatta gaaataaatc
     7321 acaaatagat atgtttgaag agatgattaa agctacgaaa gagaatgcta atgatgttgt
     7381 gttatccttt tatgatgaaa cgattaaaca aatgactact ttaggctata ttaatcaaaa
     7441 agatagtatg tttaataatt ttatacaatc ctttaaccct agtgatatta ggcttatata
     7501 acttttatca actaataaat tatgatatag taaactgatg gttagatatt ttttaaccat
     7561 cagtttgcgt ttatattagt tttttatgct tattattttt atgagtttca ctttacatta
     7621 ttgattaatc cataagaata attagcacaa aaagcagtat acataaattg agtaaagaat
     7681 tttgtcgata tatcgtgcgg aaaaataata actttttgat atatt
//
LOCUS       DALPQQ010000113         7550 bp    DNA     linear   BCT 22-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus strain K18-6-464
            SAMD00233528-rid16434743.denovo.114, whole genome shotgun sequence.
ACCESSION   DALPQQ010000113 DALPQQ010000000
VERSION     DALPQQ010000113.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMD00233528
            Sequence Read Archive: DRR236061
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 7550)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7550)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001543423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001543423.1
            Genome Coverage       :: 77x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/22/2022 17:09:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,811
            CDSs (total)                      :: 2,743
            Genes (coding)                    :: 2,689
            CDSs (with protein)               :: 2,689
            Genes (RNA)                       :: 68
            rRNAs                             :: 2, 4, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 4, 2 (16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 54
            CDSs (without protein)            :: 54
            Pseudo Genes (ambiguous residues) :: 0 of 54
            Pseudo Genes (frameshifted)       :: 27 of 54
            Pseudo Genes (incomplete)         :: 27 of 54
            Pseudo Genes (internal stop)      :: 10 of 54
            Pseudo Genes (multiple problems)  :: 10 of 54
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7550
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMD00233528-rid16434743.denovo.114"
                     /strain="K18-6-464"
                     /db_xref="taxon:1280"
                     /geo_loc_name="Japan: Niigata"
     gene            271..705
                     /locus_tag="O7798_002128"
     CDS             271..705
                     /locus_tag="O7798_002128"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000769690.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MAP domain-containing protein"
                     /protein_id="HDC2864355.1"
                     /translation="MKLKSFITVTLALGMIATTGATVAGNEVSAAEKDKLPATQKAKE
                     MQNVPYTIAVDGIMAFNQSYLNLPKDSQLSYLDLGNKVKALLYDERGVTPEKIRNAKS
                     AVYTITWKDGSKKEVDLKKDSYTANLFDSNSIKQIDINVKTK"
     gene            complement(962..1147)
                     /locus_tag="O7798_002129"
     CDS             complement(962..1147)
                     /locus_tag="O7798_002129"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499472.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YjzD family protein"
                     /protein_id="HDC2864356.1"
                     /translation="MKHLVTFFWALLLMQMVNFVLNSLVGGDSLNVVNPIIMAVLFTI
                     FTAIFAAVIKPPKDSSQ"
     gene            1442..2383
                     /locus_tag="O7798_002130"
     CDS             1442..2383
                     /locus_tag="O7798_002130"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499473.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ketoacyl-ACP synthase III"
                     /protein_id="HDC2864357.1"
                     /translation="MNVGIKGFGAYAPEKIIDNAYFEQFLDTSDEWISKMTGIKERHW
                     ADDDQDTSDLAYEASLKAIADAGIQPEDIDMIIVATATGDMPFPTVANMLQERLGTGK
                     VASMDQLAACSGFMYSMITAKQYVQSGDYHNILVVGADKLSKITDLTDRSTAVLFGDG
                     AGAVIIGEVSDGRGIISYEMGSDGTGGKHLYLDKDTGKLKMNGREVFKFAVRIMGDAS
                     TRVVEKANLTSDDIDLFIPHQANIRIMESARERLGISKDKMSVSVNKYGNTSAASIPL
                     SIDQELKNGKIKDDDTIVLVGFGGGLTWGAMTIKWGK"
     gene            2395..3639
                     /gene="fabF"
                     /locus_tag="O7798_002131"
     CDS             2395..3639
                     /gene="fabF"
                     /locus_tag="O7798_002131"
                     /EC_number="2.3.1.179"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499474.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="beta-ketoacyl-ACP synthase II"
                     /protein_id="HDC2864358.1"
                     /translation="MSQNKRVVITGMGALSPIGNDVKTTWENALKGVNGIDKITRIDT
                     EPYSVHLAGELKNFNIEDHIDKKEARRMDRFTQYAIVAAREAVKDAQLDINENTADRI
                     GVWIGSGIGGMETFEIAHKQLMDKGPRRVSPFFVPMLIPDMATGQVSIDLGAKGPNGA
                     TVTACATGTNSIGEAFKIVQRGDADAMITGGTEAPITHMAIAGFSASRALSTNDDIET
                     ACRPFQEGRDGFVMGEGAGILVIESLESAQARGANIYAEIVGYGTTGDAYHITAPAPE
                     GEGGSRAMQAAMDDAGIEPKDVQYLNAHGTSTPVGDLNEVKAIKNTFGEAAKHLKVSS
                     TKSMTGHLLGATGGIEAIFSALSIKDSKVAPTIHAVTPDPECDLDIVPNEAQDLDITY
                     AMSNSLGFGGHNAVLVFKKFEA"
     gene            complement(3694..4065)
                     /locus_tag="O7798_002132"
     CDS             complement(3694..4065)
                     /locus_tag="O7798_002132"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499475.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3899 domain-containing protein"
                     /protein_id="HDC2864359.1"
                     /translation="MLKKWLGMALITPILTFIIWLFNSHTIITYLNILFYVSLIIFIS
                     IFLILLVQEGIFDATSYGFRRLKYQMSSSKKKKSISDDPFFNPQEVKKEHYFVSTWII
                     PLLLINILYFIMTIVLSLILV"
     gene            4308..5234
                     /locus_tag="O7798_002133"
     CDS             4308..5234
                     /locus_tag="O7798_002133"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499476.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HDC2864360.1"
                     /translation="MGKYIFKRFIYMLISLFIIITITFFLMKLMPGSPFNDAKLNAEQ
                     KEILNEKYGLNDPVATQYLHYLKNVVTGDFGNSFQYHNQPVWDLIKPRLLPSFEMGLT
                     AMFIGVILGLILGVAAATKQNSWVDYTTTVISVIAVSVPSFVLAVLLQYVFAVKLRWF
                     PVAGWEGFSTAVLPSLALSAAVLATVARYIRAEMIEVLSSDYILLARAKGNSTMRVLF
                     GHALRNALIPIITIIVPMLASILTGTLTIENIFGVPGLGDQFVRSITTNDFSVIMAIT
                     LLFSTLFIVSIFIVDILYGVIDPRIRVQGGKK"
     gene            5234..6304
                     /locus_tag="O7798_002134"
     CDS             5234..6304
                     /locus_tag="O7798_002134"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499477.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HDC2864361.1"
                     /translation="MAENKNNLSINDDHSNAAMTHTSDAIASSDFIIRELDLNQEPEM
                     QRESKNFWQDAWAQLKRNKLAVVGMIGLIIIVIFAFIGPVINKHDYAEQNVEHRNLPA
                     KIPVLDKVPFLPFDGKDADGKDAYKAANAKENYWFGTDQLGRDLWTRTWKGAQISLFI
                     GVVAAMLDIFIGVVYGAISGFFGGRVDTIMQRILEVIASIPNLIVVILFVLIFEPSIW
                     TIILAMSITGWLGMSRVVRGEFLKLKNQEFVMASKTLGASKFKLIFKHILPNTLGAIV
                     VTSMFTVPSAIFFEAFLSFIGIGVPAPQTSLGSLVNDGRAMLLIYPHELFIPAMILSL
                     LILFFYLFSDGLRDAFDPKMRK"
     gene            6321..7403
                     /locus_tag="O7798_002135"
     CDS             6321..7403
                     /locus_tag="O7798_002135"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499478.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HDC2864362.1"
                     /translation="MTERILEVNDLHVSFDITAGEVQAVRGVDFYLNKGETLAIVGES
                     GSGKSVTTKAITKLFQGDTGRIKKGEILFLGEDLAKKPENELIKLRGKDISMIFQDPM
                     TSLNPTMQIGKQVMEPLIKHKNYSKAQAKKRALEILNLVGLPNAEKRFKAYPHQFSGG
                     QRQRIVIATALACEPKVLIADEPTTALDVTMQAQILDLMKELQQKIDTAIIFITHDLG
                     VVANIADRVAVMYGGQMVETGDVNEIFYDPKHPYTWGLLSSMPDLSTTNDTPLLAIPG
                     APPDLLHPPKGDAFARRSQYALDIDFKVEPPWFKVSPTHFVKSWLLDARAPKVELPEL
                     VKQRMKPMPNNYEKPLKVERVSFNEK"
     gene            7393..>7550
                     /locus_tag="O7798_002136"
     CDS             7393..>7550
                     /locus_tag="O7798_002136"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499479.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HDC2864363.1"
                     /translation="MKNDEVLLSIKNLKQYFNAGKKNEVRAIENISFDIYKGETLGLV
                     GESGCGKST"
BASE COUNT         2645 a         1076 c         1426 g         2403 t
ORIGIN      
        1 tacaaagaaa caaaggtttt aatttatata ttaggtacgg cgttcgctat aatgcaaaga
       61 agtaattaaa tttaagaaat gtaaacttag ttattgtaat gtgaatttat ttgaaaaaat
      121 agaaagtatt aacaattata gcttttacat taattaaaat ttatttttaa aaacaagtaa
      181 acaatttaca tacttataat ttttgaaact tttcaatttg tgttatattg attttgtaag
      241 atactttaac tcacaaagga gagagattat atgaaattaa aatcatttat aactgtaact
      301 ttggcactgg gcatgatcgc aacgactggc gctactgtgg caggtaatga ggtatctgca
      361 gcagaaaagg acaaactacc ggcaactcaa aaagctaaag aaatgcaaaa tgttccatat
      421 acaattgcag tagatggcat tatggctttc aatcaatctt acttaaattt accaaaagat
      481 agccaattat catatttaga tttaggaaat aaagttaaag ctttgttata tgatgaacgc
      541 ggtgtaacac ctgagaagat tcgaaatgca aaatctgccg tttacacgat tacttggaaa
      601 gatggtagta aaaaagaagt ggatcttaag aaagatagct acacagcaaa cttgtttgat
      661 tcaaattcaa ttaaacaaat tgatattaat gtaaaaacta aataaacact taaaattatc
      721 aaattcaaca tgaagcattt aattttacag tgatgattat aaaataattg ccttgataca
      781 aagattactc gtaaatgaca tctttgtatt aaggcttttt ctaaatttaa aagtgatggg
      841 ttagaggtca ttgagcttta aaatattcaa aatacaaaac attaatggcc aaaaataaaa
      901 gccgccttta tctgggcagc ttcaataata agaaagacat atttcatttt atactaaata
      961 gttattgtga tgaatctttc ggcggtttaa ttactgcagc aaaaattgct gtgaaaatcg
     1021 tgaacaatac tgccatgata attggattca ctacatttaa gctgtctcca cctactaggc
     1081 tattaagtac aaagttaacc atttgcatta ataataatgc ccaaaagaat gttacgaggt
     1141 gtttcatgtc attctacctc cactttaatt atatatattt tattttaagt gaaagttaga
     1201 aatttgtata gtaacatctc atatattttg accatattat acagtttaaa taaatgattt
     1261 tatctgaatg gctattctaa attaagcgca ttaaaaccaa tttcatactg aaatttgacg
     1321 ataataaagc attaaaattt tattaactag tcaatattcc tacctctgac ttgagtttaa
     1381 aaagtaatct atgttaaatt aatacctggt attaaaaatt ttattaagaa ggtgttcaac
     1441 tatgaacgtg ggtattaaag gttttggtgc atatgcgcca gaaaagatta ttgacaatgc
     1501 ctattttgag caatttttag atacatctga tgaatggatt tctaagatga ctggaattaa
     1561 agaaagacat tgggcagatg atgatcaaga tacttcagat ttagcatatg aagcaagttt
     1621 aaaagcaatc gctgacgctg gtattcagcc cgaagatata gatatgataa ttgttgccac
     1681 agcaactgga gatatgccat ttccaactgt cgcaaatatg ttgcaagaac gtttagggac
     1741 gggcaaagtt gcctctatgg atcaacttgc agcatgttct ggatttatgt attcaatgat
     1801 tacagctaaa caatatgttc aatctggaga ttatcataac attttagttg tcggtgcaga
     1861 taaattatct aaaataacag atttaactga ccgttctact gcagttctat ttggagatgg
     1921 tgcaggtgcg gttatcatcg gtgaagtttc agatggcaga ggtattataa gttatgaaat
     1981 gggttctgat ggcacaggtg gtaaacattt atatttagat aaagatactg gtaaactgaa
     2041 aatgaatggt cgagaagtat ttaaatttgc tgttagaatt atgggtgatg catcaacacg
     2101 tgtagttgaa aaagcgaatt taacatcaga tgatatagat ttatttattc ctcatcaagc
     2161 taatattaga attatggaat cagctagaga acgcttaggt atttcaaaag acaaaatgag
     2221 tgtttctgta aataaatatg gaaatacttc agctgcgtca atacctttaa gtatcgatca
     2281 agaattaaaa aatggtaaaa tcaaagatga tgatacaatt gttcttgtcg gattcggtgg
     2341 cggcctaact tggggcgcaa tgacaataaa atggggaaaa taggaggata acgaatgagt
     2401 caaaataaaa gagtagttat tacaggtatg ggagcccttt ctccaatcgg taatgatgtc
     2461 aaaacaacat gggagaatgc tctaaaaggc gtaaatggta tcgataaaat tacacgtatc
     2521 gatactgaac cttatagcgt tcacttagca ggagaactta aaaactttaa tattgaagat
     2581 catatcgaca aaaaagaagc gcgtcgtatg gatagattta ctcaatatgc aattgtagca
     2641 gctagagagg ctgttaaaga tgcgcaatta gatatcaatg aaaatactgc agatcgaatc
     2701 ggtgtatgga ttggttctgg tatcggtggt atggaaacat ttgaaattgc acataaacaa
     2761 ttaatggata aaggcccaag acgtgtgagt ccatttttcg taccaatgtt aattcctgat
     2821 atggcaactg ggcaagtatc aattgactta ggtgcaaaag gaccaaatgg tgcaacagtt
     2881 acagcatgtg caacaggtac aaattcaatc ggagaagcat ttaaaattgt gcaacgcggt
     2941 gatgcagatg caatgattac tggtggtaca gaagcaccaa ttactcatat ggcaattgct
     3001 ggtttcagtg caagtcgagc gctttctaca aatgatgaca ttgaaacagc atgtcgtcca
     3061 ttccaagaag gtagagatgg ttttgttatg ggtgaaggtg ctggtatttt agtaattgaa
     3121 tctttagaat cagcacaagc tcgaggtgcc aatatttatg ctgagatagt tggctatggt
     3181 actacaggtg atgcttatca tattacagcg ccagctccag aaggtgaagg tggttctaga
     3241 gcaatgcaag cagctatgga tgatgctggt attgaaccta aagatgtaca atacttaaat
     3301 gcccatggta caagtactcc tgttggtgac ttaaatgaag ttaaagctat taaaaataca
     3361 tttggtgaag cagctaaaca cttaaaagtt agctcaacaa aatcaatgac tggtcactta
     3421 cttggtgcaa caggtggaat tgaagcaatc ttctcagcgc tttcaattaa agactctaaa
     3481 gtcgcaccga caattcatgc ggtaacacca gatccagaat gtgatttgga tattgttcca
     3541 aatgaagcgc aagaccttga tattacttat gcaatgagta atagcttagg attcggtgga
     3601 cataacgcag tattagtatt caagaaattt gaagcataac tataaaaatc ttcagtaacg
     3661 ttgttttagt tactgaagat tttttcagtt tctttatact aagatgagcg acagcacaat
     3721 cgtcataata aaatataaaa tatttattaa taataagggg attatccatg tagaaacaaa
     3781 gtaatgctct ttttttacct cttgtgggtt gaaaaatgga tcatcagaga tagacttctt
     3841 ctttttcgaa gatgacattt gatactttaa tcttctaaaa ccataacttg tcgcatcaaa
     3901 aatgccttct tgtacaagta aaatcaaaaa tatgctaata aaaataatta atgaaacata
     3961 aaacaatata tttaaatatg taatgatagt atggctatta aaaagccata taataaacgt
     4021 taatattggc gttattagtg ccattccaag ccattttttc aacatttgat cactcccact
     4081 tatagaaaac tcttacgcat agtttacatt aaaatcagac attgaggaat gattttttaa
     4141 tttcttcagc tttattgaaa ttctaaaatc aatcattctt cattagttta aagcaaaaaa
     4201 atattgatat atagtaaata ttgtatatat aatattagtt aagatttcag aaaattttga
     4261 agggaatgga aatttagaaa tcggaatttg ttagaggagg ggattagatg gggaaatata
     4321 ttttcaaacg atttatttat atgcttattt ctttatttat tattattaca attacatttt
     4381 tcttaatgaa attaatgcca ggttcgccat ttaacgatgc taaattaaat gctgaacaaa
     4441 aagaaatttt aaatgaaaaa tatggattaa atgatcctgt agctacgcag tatttacatt
     4501 atttaaaaaa tgttgttaca ggcgattttg gtaattcatt ccagtatcat aatcaacctg
     4561 tgtgggattt gattaaaccg agactactac cttcttttga aatgggtctt acagcaatgt
     4621 tcatcggtgt gatactggga cttattttag gtgttgcagc agctactaaa caaaattctt
     4681 gggttgacta tacaactaca gttatttcag ttattgcagt atctgtacca tcttttgtac
     4741 ttgctgtact tttacaatat gtatttgcag ttaaattaag atggttccca gtagctggat
     4801 gggaaggttt ttcgaccgcg gtattaccgt cacttgcatt atctgcagct gttttagcaa
     4861 ctgtcgccag atacataaga gcagagatga tagaggtatt aagttcagac tatattttat
     4921 tagcgagagc taaaggtaat tcgacaatgc gtgtactttt tggacatgca cttagaaatg
     4981 ctttaattcc aattattaca attatcgttc ccatgttagc aagtatttta acaggcactt
     5041 taacaattga aaatattttt ggagttcctg gattagggga tcaattcgta cgttcaatta
     5101 caacaaatga tttctcagta atcatggcaa tcacactatt atttagcaca ctgtttatcg
     5161 tttctatttt tattgtagat attttgtacg gtgtgataga tccacgaatt cgtgttcaag
     5221 gaggtaaaaa ataatggctg aaaataaaaa caatttgtcg attaacgacg atcattctaa
     5281 tgcagctatg acgcatacct ctgacgctat cgcatcatct gattttatta ttagagaatt
     5341 agatttgaat caggaacctg aaatgcaacg agaaagcaaa aacttttggc aagatgcttg
     5401 ggctcagtta aaacgaaata agttagctgt tgtcggtatg ataggtttaa ttatcattgt
     5461 aatatttgct tttatcggtc cagttataaa taaacatgat tatgctgaac aaaatgtaga
     5521 acatagaaat cttccggcaa aaatacctgt attagacaaa gttccatttt taccttttga
     5581 tggtaaagat gcagatggca aggatgctta taaagcagca aatgctaaag aaaattattg
     5641 gtttggtact gatcagttgg gtcgagattt atggacaaga acatggaaag gtgctcaaat
     5701 ttcattgttt atcggtgttg ttgcagcgat gttagatatt tttattggtg ttgtatatgg
     5761 tgcgatttct ggattcttcg gtggacgtgt cgatacgatt atgcaacgta tacttgaagt
     5821 catagcatct attccgaatt taattgtcgt aattttattt gtattaattt ttgaaccatc
     5881 catttggaca attatattgg ctatgtctat cacaggctgg ttaggcatga gcagagttgt
     5941 acgtggagaa tttttaaaat taaaaaatca agagtttgtc atggcttcga aaacattggg
     6001 ggcttcaaaa ttcaaattga tatttaagca tattttacct aatacattag gtgctatcgt
     6061 ggttacatca atgtttacag tacctagtgc tattttcttc gaagcatttt taagtttcat
     6121 tggtataggt gtacccgcac ctcaaacatc gttagggtca ttagtaaatg atgggcgcgc
     6181 aatgttatta atttatccac atgaattatt tataccagca atgattttaa gtttattaat
     6241 tctattcttt tacttattta gtgatggatt acgtgatgca tttgatccga aaatgcgtaa
     6301 ataaaaaggg gtcatagcat atgactgaaa gaatattaga agtaaatgat ttgcatgttt
     6361 cctttgatat tacagcaggg gaagtgcagg cagtgagagg cgtagatttt tatttgaaca
     6421 aaggggaaac attggcaatt gttggtgaat caggttcagg taaatctgta acaacaaaag
     6481 caattacaaa attattccaa ggggacacag gaagaattaa aaagggagaa attttatttt
     6541 taggggaaga tttagcaaaa aaacctgaaa atgagttgat taaattacgt ggcaaagata
     6601 tttcaatgat ctttcaagat ccaatgacat ctttaaaccc aacgatgcaa attggtaaac
     6661 aagtcatgga accattaatt aagcacaaaa attatagtaa agcacaagct aaaaagcgcg
     6721 cattggaaat actaaatctt gtaggtttac caaatgcaga aaaaagattt aaagcatatc
     6781 ctcatcaatt ttcaggtgga caaaggcaaa gaattgttat tgcaaccgca ttagcttgtg
     6841 aacctaaagt gctcattgct gatgaaccaa cgactgcatt agacgtaacg atgcaggcac
     6901 aaattttaga tttaatgaaa gaactacaac aaaaaatcga tacagcaatt atttttataa
     6961 cgcatgattt aggggttgtt gcgaatattg ctgatagagt ggcagttatg tatggtggtc
     7021 aaatggttga aacaggagat gttaacgaaa tattttatga tccaaagcat ccatatacat
     7081 ggggattatt atcgtcaatg cctgatttat caacaacaaa tgacacacca ttactagcga
     7141 ttcctggagc gccacctgat ttattacacc cacctaaagg tgatgcattt gcgagacgta
     7201 gtcaatatgc attagatatt gattttaaag tagaaccacc gtggtttaaa gtttcaccga
     7261 cacattttgt gaaatcttgg ttattagacg cacgtgcacc aaaagttgaa ctacccgagc
     7321 tggtaaaaca acgtatgaaa ccgatgccta ataattatga aaaaccactc aaggtagaaa
     7381 gggtgtcgtt caatgaaaaa tgatgaagtg ctattatcta ttaaaaattt aaagcaatat
     7441 tttaacgcag gaaagaaaaa cgaagtgaga gcgattgaaa atatttcgtt tgatatatac
     7501 aaaggggaaa cattaggttt agtaggagaa tcggggtgtg gtaaatctac
//
LOCUS       DALPQQ010000114         7256 bp    DNA     linear   BCT 22-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus strain K18-6-464
            SAMD00233528-rid16434743.denovo.115, whole genome shotgun sequence.
ACCESSION   DALPQQ010000114 DALPQQ010000000
VERSION     DALPQQ010000114.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMD00233528
            Sequence Read Archive: DRR236061
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 7256)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7256)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001543423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001543423.1
            Genome Coverage       :: 77x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/22/2022 17:09:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,811
            CDSs (total)                      :: 2,743
            Genes (coding)                    :: 2,689
            CDSs (with protein)               :: 2,689
            Genes (RNA)                       :: 68
            rRNAs                             :: 2, 4, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 4, 2 (16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 54
            CDSs (without protein)            :: 54
            Pseudo Genes (ambiguous residues) :: 0 of 54
            Pseudo Genes (frameshifted)       :: 27 of 54
            Pseudo Genes (incomplete)         :: 27 of 54
            Pseudo Genes (internal stop)      :: 10 of 54
            Pseudo Genes (multiple problems)  :: 10 of 54
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7256
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMD00233528-rid16434743.denovo.115"
                     /strain="K18-6-464"
                     /db_xref="taxon:1280"
                     /geo_loc_name="Japan: Niigata"
     gene            240..7055
                     /gene="sasA"
                     /locus_tag="O7798_002137"
     CDS             240..7055
                     /gene="sasA"
                     /locus_tag="O7798_002137"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501439.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine-rich repeat glycoprotein adhesin SasA"
                     /protein_id="HDC2864364.1"
                     /translation="MSKRQKAFHDSLANEKTRVRLYKSGKNWVKSGIKEIEMFKIMGL
                     PFISHSLVSQDNQSISKKMTGYGLKTTAVIGGAFTVNMLHDQQAFAASDAPLTSELNT
                     QSETVGNQNSTTIEASTSTADSTSVTKNSSSVQTSNSDTVSSEKSEKVTSTTNSTSNQ
                     QEKLTSTSESTSSKNTTSSSDTKSVASTSSTEQPINTSTNQSTASNNTSQSTTPSSVN
                     LNKTSTTSTSTAPVKLRTFSRLAMSTFASAATTTAVTANTITVNKDNLKQYMTTSGNA
                     TYDQSTGIVTLTQDAYSQKGAITLGTRIDSNKSFHFSGKVNLGNKYEGHGNGGDGIGF
                     AFSPGVLGETGLNGAAVGIGGLSNAFGFKLDTYHNTSKPNSAAKANADPSNVAGGGAF
                     GAFVTTDSYGVATTYTSSSTADNAAKLNVQPTNNTFQDFDINYNGDTKVMTVKYAGQT
                     WTRNISDWIAKSGTTNFSLSMTASTGGATNLQQVQFGTFEYTESAVTQVRYVDVTTGK
                     DIIPPKTYSGNVDQVVTIDNQQSALTAKGYNYTSVDSSYASTYNDTNKTVKMTNAGQS
                     VTYYFTDVKAPTVTVGNQTIEVGKTMNPIVLTTTDNGTGTVTNTVTGLPSGLSYDSAT
                     NSIIGTPTKIGQSTVTVVSTDQANNKSTTTFTINVVDTTAPTVTPIGDQSSEVYSPIS
                     PIKIATQDNSGNAVTNTVTGLPSGLTFDSTNNTISGTPTNIGTSTISIVSTDASGNKT
                     TTTFKYEVTRNSMSDSVSTSGSTQQSQSVSTSKADSQSASTSTSGSIVVSTSASTSKS
                     TSVSLSDSVSASKSLSTSESNSVSSSTSTSLVNSQSVSSSMSDSASKSTSLSDSISNS
                     SSTEKSESLSTSTSDSLRTSTSLSDSLSMSTSGSLSKSQSLSTSISGSSSTSASLSDS
                     TSNAISTSTSLSESASTSDSISISNSIANSQSASTSKSDSQSTSISLSTSDSKSMSTS
                     ESLSDSTSTSGSVSGSLSIAASQSVSTSTSDSMSTSEIVSDSISTSGSLSASDSKSMS
                     VSSSMSTSQSGSTSESLSDSQSTSDSDSKSLSQSTSQSGSTSTSTSTSASVRTSESQS
                     TSGSMSASQSDSMSISTSFSDSTSDSKSASTASSESISQSASTSTSGSVSTSTSLSTS
                     NSERTSTSMSDSTSLSTSESDSISESTSTSDSISEAISASESTFISLSESNSTSDSES
                     QSASAFLSESLSESTSESTSESVSSSTSESTSLSDSTSESGSTSTSLSNSTSGSTSIS
                     TSTSISESTSTFKSESVSTSLSMSTSTSLSDSTSLSTSLSDSTSDSKSDSLSTSMSTS
                     DSISTSKSDSISTSTSLSGSTSESESDSTSSSESKSDSTSMSISMSQSTSGSTSTSTS
                     TSLSDSTSTSLSLSASMNQSGVDSNSASQSASNSTSTSTSESDSQSTSSYTSQSTSQS
                     ESTSTSTSLSDSTSISKSTSQSGSVSTSASLSGSESESDSQSISTSASESTSESASTS
                     LSDSTSTSNSGSASTSTSLSNSASASESDLSSTSLSDSTSASMQSSESDSQSTSASLS
                     DSLSTSTSNRMSTIASLSTSVSTSESGSTSESTSESDSTSTSLSDSQSTSRSTSASGS
                     ASTSTSTSDSRSTSASTSTSMRTSTSDSQSMSLSTSTSTSMSDSTSLSDSVSDSTSDS
                     TSASTSGSMSVSISLSDSTSTSTSASEVMSASISDSQSMSGSVNDSESVSESNSESDS
                     KSMSGSTSVSDSGSLSVSTSLRKSESVSESSSLSCSQSMSDSVSTSDSSSLSVSTSLR
                     SSESVSESDSLSDSKSTSGSTSTSTSGSLSTSTSLSGSESVSESTSLSDSISMSDSTS
                     TSDSDSLSGSISLSGSTSLSTSDSLSDSKSLSSSQSMSGSESTSTSVSDSQSSSTSNS
                     QFDSMSISASESDSMSTSDSSSISGSNSTSTSLSTSDSMSGSVSVSTSTSLSDSISGS
                     TSVSDSSSTSTSTSLSDSMSQSQSTSTSASGSLSTSISTSMSMSASTSSSQSTSVSTS
                     LSTSDSISDSTSISISGSQSTVESESTSDSTSISDSESLSTSDSDSTSTSTSDSTSGS
                     TSTSISESLSTSGSGSTSVSDSTSMSESNSSSVSMSQDKSDSTSISDSESVSTSTSTS
                     LSTSDSTSTSESLSTSMSGSQSISDSTSTSMSGSTSTSESNSMHPSDSMSMHHTHSTS
                     TSRLSSEATTSTSESQSTLSATSEVTKHNGTPAQSEKRLPDTGDSIKQNGLLGGVMTL
                     LVGLGLMKRKKKKDENDQDDSQA"
BASE COUNT         2652 a         1403 c         1322 g         1879 t
ORIGIN      
        1 caattataat gattaaacat aaagccaatt agccaaattt atataaaaaa agattatacg
       61 cataaacgag aaaaagtaat tttaaaaata tgaaaacgat tacatttaga cgaataaaaa
      121 tgaattttta caaattttaa caaaatgagt atttttgtat caaaaaagag ttgtattaaa
      181 ttgaatagtg gcatatatta taatctaatg aatgtaaaga taatacaagg agttattaca
      241 tgagtaaaag acagaaagca tttcatgaca gcttagcaaa cgaaaaaaca agagtaagac
      301 tttataaatc tggaaaaaat tgggtaaaat ccggaattaa agaaatagaa atgttcaaaa
      361 ttatggggct accatttatt agtcatagtt tagtgagtca agataatcaa agcattagta
      421 aaaaaatgac gggatacgga ctgaaaacta cggcggttat tggtggtgca ttcacggtaa
      481 atatgttgca tgaccagcaa gcttttgcgg cttctgatgc accattaact tctgaattaa
      541 acacacaaag tgaaacagta ggtaatcaaa actcaacgac aatcgaagca tcaacatcaa
      601 cagccgattc cacaagtgta acgaaaaata gtagttcggt acaaacatca aatagtgaca
      661 cagtctcaag tgaaaagtct gaaaaggtca cttcgacaac taatagtaca agcaatcaac
      721 aagagaaatt gacatctaca tcagaatcaa catcctcaaa gaatactaca tcaagttctg
      781 atactaaatc tgtagcttca acttcaagta cagaacaacc aattaataca tcaacaaatc
      841 aaagtactgc atcaaataac acttcacaaa gcacaacgcc atcttcggtc aacttaaaca
      901 aaactagcac aacgtcaact agcaccgcac cagtaaaact tcgaactttc agtcgcttag
      961 ctatgtcaac atttgcgtca gcagcgacga caaccgcagt aactgctaat acaattacag
     1021 ttaataaaga taacttaaaa caatatatga caacgtcagg taatgctacc tatgatcaaa
     1081 gtaccggtat tgtgacgtta acacaggatg catacagcca aaaaggtgct attacattag
     1141 gaacacgtat tgactctaat aagagttttc atttttctgg aaaagtaaat ttaggtaaca
     1201 aatatgaagg gcatggaaat ggtggagatg gtatcggttt tgccttttca ccaggtgtat
     1261 taggtgaaac agggttaaac ggtgccgcag taggtattgg tggcttaagt aacgcatttg
     1321 gcttcaaatt ggatacgtat cacaatacat ctaaaccaaa ttcagctgca aaggcgaatg
     1381 ctgacccatc taatgtagct ggtggaggtg cgtttggtgc atttgtaaca acagatagtt
     1441 atggtgttgc gacaacgtat acatcaagtt caacagctga taatgctgcg aagttaaatg
     1501 ttcaacctac aaataacacg ttccaagatt ttgatattaa ctataatggt gatacaaagg
     1561 ttatgactgt caaatatgca ggtcaaacat ggacacgtaa tatttcagat tggattgcga
     1621 aaagtggtac gaccaacttt tcattatcaa tgacagcctc aacaggtggc gcgacaaatt
     1681 tacaacaagt acaatttgga acattcgaat atacagagtc tgctgttaca caagtgagat
     1741 acgttgatgt aacaacaggt aaagatatta ttccaccaaa aacatattca ggaaatgttg
     1801 atcaagtcgt gacaatcgat aatcagcaat ctgcattgac tgctaaagga tataactaca
     1861 cgtccgtcga tagttcatat gcgtcaactt ataatgatac aaataaaact gtaaaaatga
     1921 cgaatgctgg acaatcagtg acatattatt ttactgatgt aaaagcacca actgtaactg
     1981 taggcaatca aaccatagaa gtgggtaaaa caatgaatcc tattgtattg actacaacgg
     2041 ataatggtac tgggactgtg acaaatacag ttacaggatt accaagcgga ttaagttacg
     2101 atagtgcaac gaattcaatc attgggacac caacaaaaat tggtcaatca acagtgacag
     2161 ttgtgtctac tgaccaagca aataacaaat cgacgacaac ttttacaata aatgttgtgg
     2221 atacgacagc accaacagtg acaccaatag gagatcaatc atcagaagtg tattcaccaa
     2281 tatccccgat taaaattgct acgcaagata acagtggaaa tgcggtgacg aatacagtga
     2341 ctggattgcc atccggacta acatttgata gtacaaataa tactattagt ggtacaccaa
     2401 caaacattgg tacaagtact atatcaatcg tttctacaga tgcgagcggt aacaaaacga
     2461 cgacaacttt taaatatgaa gtaacaagaa atagcatgag tgattccgta tcaacatcag
     2521 gaagtacaca acaatctcaa agtgtgtcaa caagtaaagc tgactcacaa agtgcatcaa
     2581 cgagtacatc aggatcgatt gtggtatcta catcagctag tacctcgaaa tcgacaagtg
     2641 taagcctatc tgattctgtg agtgcatcta agtcattaag cacatctgaa agtaatagtg
     2701 tatcaagctc aacaagcaca agtttagtga attcacaaag tgtatcatca agcatgtcgg
     2761 attcagctag taaatcaaca tcattaagcg attctatttc aaactctagc agtactgaaa
     2821 aatccgaaag tctatcaaca agtacatctg attcattgcg tacatcaaca tcactcagtg
     2881 actcattaag tatgagtaca tcaggaagct tgtctaagtc acaaagctta tcaacgagta
     2941 tatcagggtc gtctagtaca tcagcatcat taagtgacag tacatcgaat gcaattagta
     3001 catcaacatc attgagcgag tcagctagca cctcggactc tatcagtatt tcaaatagca
     3061 tagccaactc tcaaagtgcg tcaacaagca aatcagattc acaaagtaca tcaatatcat
     3121 taagtacaag tgattcaaaa tcgatgagta catcagaatc attgagcgat tcgacgagca
     3181 caagtggttc tgtttctgga tcactaagca tagcagcatc acaaagtgtc tcaacaagta
     3241 catcagactc gatgagtact tcagagatag taagtgactc tatcagtaca agtgggtcat
     3301 tatctgcatc agacagtaaa tcaatgtccg taagtagttc aatgagcacg tctcagtcag
     3361 gtagtacatc agaatcatta agtgattcac aaagtacatc tgattctgat agtaagtcat
     3421 tatcacaaag tactagtcaa tcaggttcaa caagtacatc aacgtcgaca agtgcttcag
     3481 tacgtacttc ggaatcacaa agtacgtctg gttcaatgag tgcaagtcaa tccgattcaa
     3541 tgagcatatc aacgtcgttt agtgattcaa cgagtgatag caaatcagca tcaactgcat
     3601 caagtgaatc aatatcacaa agtgcttcta cgagcacatc tggttcggta agtacttcga
     3661 catcgttaag tacaagtaat tcagaacgta catcaacatc tatgagtgat tccacaagct
     3721 taagtacatc agagtctgat tcaataagtg aatcaacgtc aacgagcgac tctataagtg
     3781 aagcaatatc tgcttcagag agcacgttta tatcattaag tgaatcaaat agtactagcg
     3841 attcagaatc acaaagtgca tctgcctttt taagtgaatc attaagtgaa agtacgtctg
     3901 aatcaacatc agagtcagtg agtagttcga caagtgagag tacgtcatta tcagacagta
     3961 catcagaatc tggtagcaca tcaacatcat taagtaattc aacaagtggt agtacgtcca
     4021 tttcaacatc gacaagtatc agtgaatcaa cgtcaacgtt taagagcgag agtgtttcaa
     4081 catcactgag tatgtcaacg agtacaagtt tgtctgactc tacaagtttg tcaacatcat
     4141 taagtgattc cacaagtgat agtaagtctg attcattaag tacatcaatg tcgacaagtg
     4201 attcaatcag tacaagtaaa tctgattcca ttagtacatc cacatcatta agtggttcta
     4261 caagtgaaag tgaatccgac tcaacatcat caagtgaaag taaatccgat tcaacatcaa
     4321 tgagcataag tatgtctcaa tcaacatcag gaagtacaag tacgtcaacg agtacaagtt
     4381 tgtctgactc aacgagtaca tcattgtcac taagtgcctc aatgaatcaa agcggagtag
     4441 actcaaactc agcaagccaa agtgcctcaa actcaacaag tacaagcacg agcgaatccg
     4501 attcacaaag cacatcatca tatacaagtc agtcaacaag ccaaagtgaa tccacatcga
     4561 catcaacgtc actaagcgat tcaacaagta tatctaaaag tacgagtcaa tcaggttcgg
     4621 taagcacatc agcgtcatta agtggttcag agagtgaatc tgattcacaa agtatctcaa
     4681 caagtgcaag tgagtcaaca tcagaaagtg cgtcaacatc actcagtgac tcaacaagta
     4741 caagtaactc aggatcagca agtacgtcaa catcgctcag taactcagca agcgcaagtg
     4801 aatccgattt gtcgtcaaca tctttaagtg attcaacatc tgcgtcaatg caaagcagtg
     4861 aatccgattc acaaagcaca tcagcatcat taagtgattc gctaagtaca tcaacttcaa
     4921 accgcatgtc gaccattgca agtttatcta catcggtaag tacatcagag tctggctcaa
     4981 catcagaaag tacaagtgaa tccgattcaa catcaacatc attaagcgat tcacaaagca
     5041 catcaagaag tacaagtgca tcaggatcag caagtacatc aacatcaaca agtgactctc
     5101 gtagtacatc agcttcaact agtacttcga tgcgtacaag tactagtgat tcacaaagta
     5161 tgtcgctttc gacaagtaca tcaacaagta tgagtgattc aacgtcatta tctgatagtg
     5221 ttagtgattc aacatcagac tcaacaagtg cgagtacatc tggttcgatg agtgtgtcta
     5281 tatcgttaag tgattcgaca agtacatcaa catcggctag tgaagtaatg agcgcaagca
     5341 tatctgattc acaaagtatg tcaggatctg taaatgattc agaaagtgta agtgaatcta
     5401 attctgaaag tgactctaaa tcgatgagtg gctcaacaag tgtcagtgat tctggctcat
     5461 tgagcgtctc aacgtcatta agaaaatcag aaagtgtaag cgagtcaagt tcattgagtt
     5521 gctcacaatc gatgagcgat tcagtaagca caagcgattc gtcatcatta agtgtatcga
     5581 cgtcactaag aagttcagaa agcgtgagtg aatctgattc attaagtgat tcaaaatcaa
     5641 caagtggttc gacttcaaca agtacatctg gttcattgag tacctcaaca tcattaagtg
     5701 gttcagaaag cgtaagcgag tctacctcgc taagtgattc aatatcaatg agtgattcta
     5761 ctagtacaag tgactccgac tcattaagtg gatcaatatc tttaagtggt tccacaagtc
     5821 ttagcacttc ggattcatta agtgattcaa aatcattgag tagctcgcaa agtatgagtg
     5881 gatcagaatc aacgtcaaca agtgtgagcg attcgcagtc aagctcaaca agtaatagtc
     5941 aatttgactc tatgagcatc agtgcatcag aaagcgactc aatgtctaca agtgattcgt
     6001 ctagcatcag tggatcaaat tcaacgagta catcactttc aacatctgac tcaatgagcg
     6061 gaagcgtatc agtttcaaca tcgacaagtt taagtgactc aatatcaggt tcaacaagtg
     6121 taagtgactc gagctcaaca agcacatcta catcattaag tgattcaatg tcacaaagcc
     6181 agtcaacaag tacaagtgca tctggttcct taagtacatc gatatcaaca tcaatgtcaa
     6241 tgagtgctag tacatcgtca tcacaaagca catcggtgtc gacatcatta tcaacatcag
     6301 acagtatcag tgattctact tcaataagta tcagtggttc acaaagtaca gtagaatcag
     6361 aatctacaag tgattcaact tctatcagtg actcagaatc attgagtaca tcagattcag
     6421 actcgacatc gacaagtaca tcggactcaa caagtggttc aacttcaaca agcatatctg
     6481 aatcattaag tacgtctggt tcaggttcaa cgagcgtatc tgactcaaca tcaatgagtg
     6541 aatctaattc atcgagtgtt tcaatgtcac aagacaaatc cgactcaaca tcaattagtg
     6601 actcagaatc agtgtcaaca agcacatcaa cgtcattgag cacatccgat tcgacaagca
     6661 catccgaatc actgagtaca tctatgtctg gttcacaaag catttctgac tcaacatcaa
     6721 caagtatgtc cggctcaaca agtacatctg aatctaactc aatgcatccg tcagactcaa
     6781 tgagtatgca tcatactcac agcacgagca catctcgctt atcaagtgaa gcaacaacga
     6841 gcacgagtga atctcagtct acattaagtg caacatctga agtgactaaa cataatggca
     6901 caccagcaca aagtgaaaaa agattgccag atacaggtga ctcaataaaa caaaatggat
     6961 tactaggtgg cgttatgaca ttattagttg gtttaggttt aatgaagaga aagaaaaaga
     7021 aagatgaaaa tgatcaagat gattctcaag cataaattga atttatagct ggctaaaatt
     7081 aaaaagactg aggcaccaat cactagaaaa atcgatatag gattttaata attagtgatg
     7141 aacccttagt ctttttaatg tttttgatat aaaagaggtg caacatgtta aaacttttac
     7201 aacaatacga atataaaatt atatataaac gtatgctata cacatgtttt atcttg
//
LOCUS       DALPQQ010000115         7240 bp    DNA     linear   BCT 22-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus strain K18-6-464
            SAMD00233528-rid16434743.denovo.116, whole genome shotgun sequence.
ACCESSION   DALPQQ010000115 DALPQQ010000000
VERSION     DALPQQ010000115.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMD00233528
            Sequence Read Archive: DRR236061
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 7240)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7240)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001543423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001543423.1
            Genome Coverage       :: 77x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/22/2022 17:09:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,811
            CDSs (total)                      :: 2,743
            Genes (coding)                    :: 2,689
            CDSs (with protein)               :: 2,689
            Genes (RNA)                       :: 68
            rRNAs                             :: 2, 4, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 4, 2 (16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 54
            CDSs (without protein)            :: 54
            Pseudo Genes (ambiguous residues) :: 0 of 54
            Pseudo Genes (frameshifted)       :: 27 of 54
            Pseudo Genes (incomplete)         :: 27 of 54
            Pseudo Genes (internal stop)      :: 10 of 54
            Pseudo Genes (multiple problems)  :: 10 of 54
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7240
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMD00233528-rid16434743.denovo.116"
                     /strain="K18-6-464"
                     /db_xref="taxon:1280"
                     /geo_loc_name="Japan: Niigata"
     gene            complement(266..709)
                     /locus_tag="O7798_002138"
     CDS             complement(266..709)
                     /locus_tag="O7798_002138"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500731.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HDC2864365.1"
                     /translation="MSIITRLFNNSDFEKLNQLCKLYDDLGYPTNENDLKKRLKKITN
                     HDDYFLLLLIKENKIIGLSGMCKMMFYEKNAEYMRILAFVIHSEFRKKGYGKRLLADS
                     EEFSKRLNCKAITLNSGNRNERLSAHKLYSDNGYVSNTSGFTKQL"
     gene            complement(815..1252)
                     /locus_tag="O7798_002139"
     CDS             complement(815..1252)
                     /locus_tag="O7798_002139"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500732.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDC2864366.1"
                     /translation="MFISLAIWSINSMGNKQCISLNLLLSDDTFAVISVMTTLGTAIL
                     GGIAPSIYGIFTSPIDKKSSFRAISDWEQEQRNNVKDLMMLLPFTLLSILIVIFIFQF
                     AYSKLFNTIAIIIFIIILVVMFFLILLICYKITVKICRYFSKE"
     gene            complement(1570..2160)
                     /locus_tag="O7798_002140"
     CDS             complement(1570..2160)
                     /locus_tag="O7798_002140"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500733.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="terminase small subunit"
                     /protein_id="HDC2864367.1"
                     /translation="MSELTAKQARFVNEYIRTLNVTQSAIKAGYNANSAHVTACRLLK
                     KPHIKQYIQEQKDKIIDENVLTAKELLHVLTNAAVGDETETKEVVVKRGEYKENPQSG
                     KVQLVYNEHVELIEVPIKPSDRLKARDMLGKYHKLFTDKHDINGNVPIFINIGEWDGG
                     DEGLDKAVKDVSNDNPNHTVIVDDIPLEDYESIRFL"
     gene            complement(2157..2369)
                     /locus_tag="O7798_002141"
     CDS             complement(2157..2369)
                     /locus_tag="O7798_002141"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500734.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pathogenicity island family protein"
                     /protein_id="HDC2864368.1"
                     /translation="MTDDNVNDHIIKNHIEMIVDRLATDKEFYIFDSLIQGLSYQDIS
                     SALDCSEQSVILWYETILDKIVGVIK"
     gene            2430..2976
                     /locus_tag="O7798_002142"
                     /pseudo
     CDS             2430..2976
                     /locus_tag="O7798_002142"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002476300.1"
                     /note="frameshifted; incomplete; partial in the middle of
                     a contig; missing N-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="site-specific integrase"
     gene            complement(3071..4687)
                     /gene="groL"
                     /locus_tag="O7798_002143"
     CDS             complement(3071..4687)
                     /gene="groL"
                     /locus_tag="O7798_002143"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500736.1"
                     /note="60 kDa chaperone family; promotes refolding of
                     misfolded polypeptides especially under stressful
                     conditions; forms two stacked rings of heptamers to form a
                     barrel-shaped 14mer; ends can be capped by GroES;
                     misfolded proteins enter the barrel where they are
                     refolded when GroES binds; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chaperonin GroEL"
                     /protein_id="HDC2864369.1"
                     /translation="MVKQLKFSEDARQAMLRGVDQLANAVKVTIGPKGRNVVLDKEFT
                     APLITNDGVTIAKEIELEDPYENMGAKLVQEVANKTNEIAGDGTTTATVLAQAMIQEG
                     LKNVTSGANPVGLRQGIDKAVKVAVEALHENSQKVENKNEIAQVGAISAADEEIGRYI
                     SEAMEKVGNDGVITIEESNGLNTELEVVEGMQFDRGYQSPYMVTDSDKMVAELERPYI
                     LVTDKKISSFQDILPLLEQVVQSNRPILIVADEVEGDALTNIVLNRMRGTFTAVAVKA
                     PGFGDRRKAMLEDLAILTGAQVITDDLGLDLKDASIDMLGTASKVEVTKDNTTVVDGD
                     GDENSIDARVSQLKSQIEETESDFDREKLQERLAKLAGGVAVIKVGAASETELKERKL
                     RIEDALNSTRAAVEEGIVAGGGTALVNVYQKVSEIEAEGDIETGVNIVLKALTAPVRQ
                     IAENAGLEGSVIVERLKNAEPGVGFNAATNEWVNMLEEGIVDPTKVTRSALQHAASVA
                     AMFLTTEAVVASIPEKNNDQPNMGGMPGMM"
     gene            complement(4763..5047)
                     /gene="groES"
                     /locus_tag="O7798_002144"
     CDS             complement(4763..5047)
                     /gene="groES"
                     /locus_tag="O7798_002144"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500737.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="co-chaperone GroES"
                     /protein_id="HDC2864370.1"
                     /translation="MLKPIGNRVIIEKKEQEQTTKSGIVLTDSAKEKSNEGVIVAVGT
                     GRLLNDGTRVTPEVKEGDRVVFQQYAGTEVKRDNETYLVLNEEDILAVIE"
     gene            5222..5965
                     /locus_tag="O7798_002145"
     CDS             5222..5965
                     /locus_tag="O7798_002145"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500738.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CPBP family intramembrane metalloprotease"
                     /protein_id="HDC2864371.1"
                     /translation="MTRLWASLLTVIIYILSQFLPLLIVKKLPFVQYSGIELTKAVIY
                     IQLVLFLIAATTIILINLKIKNPTKLELEVKEPKKYIIPWALLGFALVMIYQMVVSIV
                     LTQIYGGQQVSPNTEKLIIIARKIPIFIFFVSIIGPLLEEYVFRKVIFGELFNAIKGN
                     RIVAFIIATTVSSLIFALAHNDFKFIPVYFGMGVIFSLAYVWTKRLAVPIIIHMLQNG
                     FVVIFQLLNPEALKKATEQANFIYHIFIP"
     gene            complement(5990..7171)
                     /locus_tag="O7798_002146"
     CDS             complement(5990..7171)
                     /locus_tag="O7798_002146"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500739.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDC2864372.1"
                     /translation="MSYHWFKKMLLSTSILILSSSSLGLATHTVEAKDNLNGEKPTTN
                     LNHNITSPSVNSEMNNNETGTPHESNQTGNEGTGSNSRDANPDSNNVKPDSNNQNPST
                     DSKPDPNNQNPSPNPKPDPDNPKPKPDPKPDPDKPKPNPDPKPDPDKPKPNPNPKPDP
                     NKPNPNPSPDPDQPGDSNHSGGSKNGGTWNPNASDGSNQGQWQPNGNQGNSQNPTGND
                     FVSQRFLALANGAYKYNPYILNQINKLGKDYGEVTDEDIYNIIRKQNFSGNAYLNGLQ
                     QQSNYFRFQYFNPLKSERYYRNLDEQVLALITGEIGSMPDLKKPEDKPDSKQRSFEPH
                     EKDDFTVVKKQEDNKKSASTAYSKSWLAIVCSMMVVFSIMLFLFVKRNKKKNKNESQR
                     R"
BASE COUNT         2247 a         1363 c          980 g         2650 t
ORIGIN      
        1 ttaaagatta ttaaatcagc gttttaattt ttagacaacg ctattatttt tagtttttca
       61 attctattat gtcataatta tgtcactcaa aaactgtttt ccaacattga tttattgttg
      121 gaaaatctcg aaaatctagt ctatttctcc aacaatcgaa gaattatgcc cttttttctc
      181 cctttaaata agtcataata cgaggcatac atgcaacatt tacaataaaa tatgttccta
      241 catcgtatta tacgaatgct cacacttata gttgtttagt aaacccagat gtattgctaa
      301 catacccatt atcactatat agtttatgtg cagatagtct ttcatttcta ttaccactat
      361 ttagtgttat tgctttacaa ttcaaccgtt tagaaaattc ttcagaatca gctaataatc
      421 tctttccata accttttttc ctaaattcag aatgtataac aaacgcaagg attctcatat
      481 actctgcatt tttttcgtaa aacatcattt tacacatacc acttaaacca attattttat
      541 tttcttttat caaaagcagt aggaagtaat catcatgatt cgttattttc tttagtctct
      601 tttttaaatc attctcattt gttggataac ctagatcatc atataattta catagttgat
      661 ttaatttttc aaaatcactg ttattaaaca atcttgtaat tatgctcata taacccaccc
      721 taaaaatatt atgtacctat tgttacatac aatagatacg caaaatcatt tctcactgca
      781 aatcaggacg tttctcagcg taaacaaatc atttctattc ttttgaaaaa tatctgcata
      841 tcttcacagt aattttataa cagattaata aaattaaaaa aaacataaca acaagtatta
      901 taataaatat tataatagct atcgtattaa atagtttaga atatgcaaac tgaaaaataa
      961 aaatcacaat taaaatacta agtaatgtaa atggtaatag catcatcaga tctttaacat
     1021 tatttctttg ttcttgctcc caatcgctaa tagccctaaa actacttttt ttatctatag
     1081 gcgatgtaaa aataccatat attgaaggtg ctatacctcc taaaatagca gttcccaaag
     1141 ttgtcattac tgaaattact gcgaaagtat catccgaaag caataaattc aaactaatgc
     1201 attgtttatt acccatcgaa tttattgacc aaatagctag agaaataaac aacccaaaat
     1261 ttaaaataaa tgatatagta atagcaattg tttacaaaac acgaaatttt tcatttttat
     1321 ttatattatc catttttctc cctttttctt aaatcatttt attatatatt acaataatca
     1381 atctgaaatg ttgatgtaat ttgaaaaaaa tatcatactt ttactcctga aaacctccct
     1441 aaatcatcaa tatgaaaatc agtattagga tattgcgttt acaactcttt taaatctcac
     1501 tcattcttct catcgtctta accgatacta tcaataaata ctggcaacac cataaaatat
     1561 atacccaatt tataaaaacc taattgactc ataatcttct aacggtatat catccacaat
     1621 cacagtatga ttaggattat cgttagatac atctttcact gccttatcta acccctcatc
     1681 acctccgtcc cattcaccaa tattaatgaa tataggtaca ttaccgttta tatcatgctt
     1741 atctgtaaat aatttatgat atttacccaa catatcacga gcttttaaac gatcactagg
     1801 ttttattggt acctctatca gttcaacatg ttcattatag actaattgta ctttgccact
     1861 ttgtggattt tctttatatt ctccacgctt gactacaact tctttcgttt ctgtttcatc
     1921 accgactgcc gcattcgtta gcacatgtaa taactctttt gcggttaata cattctcatc
     1981 tataatctta tctttttgtt cttgtatata ttgcttgatg tgcggctttt tcaataacct
     2041 acacgctgtc acatgtgcgc tatttgcgtt atatcctgct tttatggcac tttgtgttac
     2101 attcagtgtt ctaatatact cattcacaaa acgtgcttgc tttgcagtta actcactcat
     2161 tttatcaccc ccacaatttt atctaatatg gtttcatacc ataatattac agattgttct
     2221 gaacaatcta aggcactact aatatcttga taactaagtc cttgtataag ggagtcaaaa
     2281 atataaaact ctttatcggt cgctaatctg tcaacaatca tttctatgtg attctttata
     2341 atatgatcat tgacattatc gtctgtcatc aattcgtcag aatcttcatc acctattaaa
     2401 aagaaatcat cagtatttat ttcatcatcg ccccgttaac tagctttgaa gtctttagca
     2461 cacttgcata taccggctgt cgtgctggcg agatactagc attgaagtgg tctgatattg
     2521 attttgaaaa caacacgatt agtattacta aaacatatta caatccaaat aataacaaga
     2581 agaaatatca gatacttccc cctaaaactg aaagttctat cggtaagatt tccgttgacc
     2641 caaatgtaat aaaggtgttg cgtgattata agataaacgt tcaaaataat tggaaaaacg
     2701 aattatataa tgataaccat tgtaatgaaa aaactatcaa tgtggataca aaccattatg
     2761 tcacgtacca gcatactcaa aaatatctct acgcactcat tcagatacac acattgcgca
     2821 ttgctcatag aatcaggtgt acacattaaa gaaatacaag aacgattacg gcataaagat
     2881 atcaatacca ctatgaatat ctatgctaaa atcacaaatt catacaaaaa agacgcctcc
     2941 cataagttta gtcaccaaat ggaagacgtc tcgtaattaa aatatatttg cgtgcattct
     3001 aatttatact tagaatgaat catactcgtg cataatgtaa ttttctagtt agtcaaaact
     3061 ataaacagtt ttacatcatt cctggcatgc cacccatgtt aggttggtca ttattttttt
     3121 ctggaattga tgctacaacc gcttcagtcg ttaagaacat tgctgcaaca cttgcagcat
     3181 gttgtaatgc tgagcgtgtt actttagttg gatcaacgat accttcttct aacatattaa
     3241 cccactcgtt tgtagcagcg ttaaaaccaa cacccggctc tgcgtttttc aaacgttcta
     3301 caataacaga accttctaat cctgcatttt cagcaatttg acgaactggt gcagttaatg
     3361 ctttaagtac aatatttaca cctgtttcaa tgtcaccttc agcttcaatt tcacttactt
     3421 tttggtaaac atttactaat gcagtaccac cacctgcaac aataccttct tcaactgctg
     3481 cacgtgtaga atttaatgca tcttcaatac gtaatttacg ttctttaagc tctgtttcac
     3541 ttgctgcacc tactttgata actgcaacac cacctgctaa tttagctaag cgctcttgta
     3601 atttttcacg atcaaagtca gattcagttt cttcaatttg agatttcaat tggctaacac
     3661 gtgcatcaat gctgttttcg tcaccgtcac catcaacaac agtggtatta tctttagtta
     3721 cttctacttt acttgcagta cctaacatat caattgatgc atcttttaaa tctaagccta
     3781 aatcatcagt aatcacttgc gcaccagtta aaatagctaa atcttcaagc atcgcttttc
     3841 tacgatcacc aaaaccaggt gcttttactg caacagctgt aaatgtgcca cgcatacggt
     3901 ttagcacgat atttgttaat gcatcgcctt caacttcatc agctacaatt aagattggac
     3961 gattagattg aaccacttgt tctaataaag gtaagatatc ttggaaagac gagattttct
     4021 tatctgttac taaaatgtat gggcgttcta attcagcaac cattttatct gaatcagtaa
     4081 ccatatacgg tgattgataa ccacgatcaa attgcatacc ttcaaccact tctagttcag
     4141 tgtttagtcc atttgattct tcaattgtaa tgacaccatc gttacctact ttttccatag
     4201 cttcagaaat ataacgtcca atttcttcat ctgctgctga aatcgcacct acttgcgcaa
     4261 tttcattttt attttcaact ttttgagaat tttcatgtaa cgcttcaaca gcaactttaa
     4321 ctgctttgtc gataccttgt cgtaaaccaa ctgggttcgc accacttgta acatttttca
     4381 agccttcttg aatcattgct tgagctaata ctgttgcagt tgtcgtaccg tcaccagcaa
     4441 tttcatttgt cttatttgcg acttcttgaa ctagtttagc ccccatattt tcatatggat
     4501 cttctaattc gatttcttta gcaatcgtca caccatcatt cgtaattaaa ggtgctgtaa
     4561 actctttatc taatacaaca ttacgtcctt taggaccaat cgttacttta actgcatttg
     4621 caagttggtc aacaccacgt aacattgctt gacgtgcatc ttcagagaat ttcaattgtt
     4681 taaccataaa tgataaacct ccatttgttt agttgtgttt cattttcgtt ctatttaatt
     4741 tatttatgaa ttaagttctg tattattcaa taactgctaa aatatcttct tcatttaata
     4801 ccagatatgt ttcattatct cgtttaactt ctgtaccagc atattgttgg aacacgacac
     4861 ggtccccttc tttcacttca ggagtcactc ttgtaccatc atttaatagg cgtccagttc
     4921 ctactgcaac gataacgcct tcgtttgatt tttctttagc actatcagtt aaaacaatac
     4981 cacttttagt tgtttgttct tgttcttttt tctcaataat cacacgattt ccaattggtt
     5041 ttagcatgat tgttcctcct taaaaaacct aaagtttagc acttaacatt aaagagtgct
     5101 aacatacatt tataataatc aaatttggtc aaaatttcaa gtcataacct tttaattaag
     5161 ttttgtaact tcaagttatt tacgataaaa taaattataa acaaatattt ggaggaaaat
     5221 tatgacaaga ttatgggcat cattgctaac tgttattatt tatatattgt ctcaattttt
     5281 accgcttctc attgtaaaaa aattaccatt tgtacaatat agtggcatag aactgactaa
     5341 agcagtcatt tacatacaac ttgttctatt tttaatcgcc gccacgacga ttattttaat
     5401 taatttaaaa attaaaaatc caacaaaatt agaattagaa gttaaagaac ctaaaaaata
     5461 tatcattcca tgggcattgc ttggatttgc attggtaatg atttatcaaa tggtagtgag
     5521 cattgtatta acgcaaattt atggtggaca acaagtaagt cctaatacag aaaagctaat
     5581 tattattgct cgaaaaatac ctatatttat cttctttgta tctattattg gtcctttatt
     5641 agaagaatat gtattcagaa aagtaatctt tggagaatta tttaatgcga ttaaaggtaa
     5701 tcgtatcgtg gcatttatta ttgctacaac agtaagttca ttaatatttg cattagcaca
     5761 taatgatttc aaatttattc cagtttattt tggtatgggt gtcatttttt cattagcata
     5821 tgtttggaca aaacggcttg ctgttccaat tattatccat atgttacaaa acggatttgt
     5881 cgttatattc caattactta atcctgaggc tttgaaaaaa gccacggaac aagcgaattt
     5941 tatatatcac atttttattc cataataaaa aaaacgaatc acacacggat tatcgtcgct
     6001 gtgattcgtt tttatttttc tttttatttc gctttacaaa taagaatagc atgattgaaa
     6061 ataccaccat catagaacat acaattgcta gccaactttt actatatgca gttgacgcac
     6121 ttttcttatt atcttcttgt tttttaacta ctgtaaaatc gtctttttca tgcggttcaa
     6181 atgagcgttg ttttgaatcc ggcttatctt cgggcttttt caaatctggc attgatccaa
     6241 tttcaccagt aattaatgcg agtacttgtt catctaaatt acgatagtac ctttctgatt
     6301 tcaatggatt gaaatattgg aatctaaagt aattcgattg ctgttgtaat ccatttaaat
     6361 atgcatttcc gctgaaattt tgttttcgaa taatattata aatgtcttca tcagtaactt
     6421 ctccataatc tttgcccaac ttattaattt gatttaaaat atacggatta tacttgtaag
     6481 ccccatttgc caaggctaaa aatcgttggg atacaaaatc attaccagta ggattttgtg
     6541 agtttccttg attcccattt ggttgccatt gaccttgatt agatccatct gaagcatttg
     6601 ggttccatgt ccccccattt ttcgagccac cagaatgatt ggaatcccca ggttgatcgg
     6661 gatctggtga cgggttagga tttggcttat tagggtctgg ttttggattc ggatttggct
     6721 ttggtttatc tggatctggt tttggatccg gatttggctt tggtttatct gggtctggtt
     6781 ttggatccgg ttttggtttc gggttatctg gatctggttt aggattcgga cttgggtttt
     6841 ggttatttgg gtctggtttt gaatctgtac ttgggttttg gttgtttgag tctggcttca
     6901 cattattcga atcaggatta gcatcacgac tattcgaacc tgttccttca ttacccgttt
     6961 gatttgattc gtgaggtgtc ccagtctcat tattattcat ttcactattt actgatggtg
     7021 aagttatatt atgattcaaa ttagtagttg gtttttctcc atttaagtta tcctttgctt
     7081 caactgtgtg cgttgcaagc cctaaactac tactacttaa aattaaaata cttgttgaaa
     7141 gtaacatttt cttaaaccaa tgatatgaca tttcacgaga cacctccctt tttcatgtaa
     7201 gtattaatct aagtataata aatatgcgtt gaaaatgcat
//
LOCUS       DALPQQ010000116         7181 bp    DNA     linear   BCT 22-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus strain K18-6-464
            SAMD00233528-rid16434743.denovo.117, whole genome shotgun sequence.
ACCESSION   DALPQQ010000116 DALPQQ010000000
VERSION     DALPQQ010000116.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMD00233528
            Sequence Read Archive: DRR236061
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 7181)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7181)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001543423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001543423.1
            Genome Coverage       :: 77x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/22/2022 17:09:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,811
            CDSs (total)                      :: 2,743
            Genes (coding)                    :: 2,689
            CDSs (with protein)               :: 2,689
            Genes (RNA)                       :: 68
            rRNAs                             :: 2, 4, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 4, 2 (16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 54
            CDSs (without protein)            :: 54
            Pseudo Genes (ambiguous residues) :: 0 of 54
            Pseudo Genes (frameshifted)       :: 27 of 54
            Pseudo Genes (incomplete)         :: 27 of 54
            Pseudo Genes (internal stop)      :: 10 of 54
            Pseudo Genes (multiple problems)  :: 10 of 54
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7181
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMD00233528-rid16434743.denovo.117"
                     /strain="K18-6-464"
                     /db_xref="taxon:1280"
                     /geo_loc_name="Japan: Niigata"
     gene            88..270
                     /locus_tag="O7798_002147"
     CDS             88..270
                     /locus_tag="O7798_002147"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000694772.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDC2864373.1"
                     /translation="MKITNCKIKRETVIYEVLTSGNQPFTYELPKDLSSHNARKYLEF
                     ISQKLDGDKLTKEDSL"
     gene            370..834
                     /locus_tag="O7798_002148"
     CDS             370..834
                     /locus_tag="O7798_002148"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000825946.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDC2864374.1"
                     /translation="MKRLLGLLLVSTLVLSACGNDENQEESKKEVKSKEKKIEKEKEN
                     KSKKDKEKEVATQQQPDNQTVEQPQSQEQSVQQPQQQIPQNSVPQQNVQVQQNKKQKV
                     DLNNMPPTDFSTEGMSEQAQKQIEELSMQKDYHGLSQREYNDRVSEIINNDN"
     gene            893..1930
                     /locus_tag="O7798_002149"
     CDS             893..1930
                     /locus_tag="O7798_002149"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500723.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="site-specific integrase"
                     /protein_id="HDC2864375.1"
                     /translation="MKTRCYDGKKWQYEFKHEGKRYRKKGFRTKREANSAGLDKLNEL
                     RSGFNIDNYITLEEYFENWIKTYKQPVVKENTYRHYRNALQHIQKHKIGKMELSKINR
                     QVYQKFINDYSKEHAKETIRKTNGAIRSALDDALYDGLIFKNPAYKVNYKAGKPTKSE
                     QEKFISVTEYEILKDHVRKKRTRSSLALFIMICTGCRVSGARNIKIEHINQVKNTIFI
                     DERKTNTSPRYISIAKSDMKHIMDVISTFAISYDGYIFKEGGSIINLHAINNALKSAC
                     RVNNIPIITSHALRHTHCSYLLAKGVSIHYISKRLGHKNIAITTSVYSHLLEEKFNEE
                     DKKTTKILESM"
     gene            1987..2811
                     /gene="sph"
                     /locus_tag="O7798_002150"
                     /pseudo
     CDS             1987..2811
                     /gene="sph"
                     /locus_tag="O7798_002150"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000239616.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="sphingomyelin phosphodiesterase"
     gene            complement(3049..4065)
                     /gene="lukG"
                     /locus_tag="O7798_002151"
     CDS             complement(3049..4065)
                     /gene="lukG"
                     /locus_tag="O7798_002151"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500725.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bi-component leukocidin LukGH subunit G"
                     /protein_id="HDC2864376.1"
                     /translation="MIKQLCKNITICTLALSTTFTVLPATSFAKINSEIKQVSEKNLD
                     GDTKMYTRTATTSDSQKNITQSLQFNFLTEPNYDKETVFIKAKGTIGSGLRILDPNGY
                     WNSTLRWPGSYSVSIQNVDDNNNTNVTDFAPKNQDESREVKYTYGYKTGGDFSINRGG
                     LTGNITKESNYSETISYQQPSYRTLLDQSTSHKGVGWKVEAHLINNMGHDHTRQLTND
                     SDNRTKSEIFSLTRNGNLWAKDNFTPKDKMPVTVSEGFNPEFLAVMSHDKKDKGKSQF
                     VVHYKRSMDEFKIDWNRHGFWGYWSGENHVDKKEEKLSALYEVDWKTHNVKFVKVLND
                     NEKK"
     gene            complement(4087..5142)
                     /gene="lukH"
                     /locus_tag="O7798_002152"
     CDS             complement(4087..5142)
                     /gene="lukH"
                     /locus_tag="O7798_002152"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500726.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bi-component leukocidin LukGH subunit H"
                     /protein_id="HDC2864377.1"
                     /translation="MKNKKRVLIASSLSCAILLLSAATTQANSAHKDSQDQNKKEHVD
                     KSQQKDKRNVTNKDKNSTAPDDIGKNGKITKRTETVYDEKTNILQNLQFDFIDDPTYD
                     KNVLLVKKQGSIHSNLKFESHKEEKNSNWLKYPSEYHVDFQVKRNRKTEILDQLPKNK
                     ISTAKVDSTFSYSSGGKFDSTKGIGRTSSNSYSKTISYNQQNYDTIASGKNNNWHVHW
                     SVIANDLKYGGEVKNRNDELLFYRNTRIATVENPELSFASKYRYPALVRSGFNPEFLT
                     YLSNEKSNEKTQFEVTYTRNQDILKNRPGIHYAPPILEKNKDGQRLIVTYEVDWKNKT
                     VKVVDKYSDDNKPYKEG"
     gene            5577..6800
                     /locus_tag="O7798_002153"
     CDS             5577..6800
                     /locus_tag="O7798_002153"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500727.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ArgE/DapE family deacylase"
                     /protein_id="HDC2864378.1"
                     /translation="MTTFSEKEKIQLLADIVELQTENNNEIDVCNYLTDLFDKYDIKS
                     EILKVNEHRANIVAEIGNGSPILALSGHMDVVDAGNQDNWSYPPFQLTEKDGKLYGRG
                     TTDMKGGLMALVVSLIELKEQNELPHGTIRLLATAGEEKEQEGAKLLADKGYLDDVDG
                     LIIAEPTGSGIYYAHKGSMSCKVTATGKAVHSSVPFIGDNAIDTLLEFYNLFKEKYSE
                     LKQQDTKHELDVAPMFKSLIGKEISEEDANYASGLTAVCSIINGGKQFNSVPDEASLE
                     FNVRPVPEYDNDFIESFFQNIINDVDSNKLSLDIPSNHRPVTSDKNSKLITTIKDVAS
                     SYVEQDEIFVSALVGATDASSFLGDNKDNVDLAIFGPGNPLMAHQIDEYIEKDMYLKY
                     IDIFKEASIQYLKEK"
BASE COUNT         2577 a         1102 c         1120 g         2382 t
ORIGIN      
        1 aatatatgtg gattaaagaa ttgaagtatt aattatgctt atttaaaaaa gacgtctatt
       61 tcagcagtgt ttgaaaggaa gtttataatg aaaataacta attgcaaaat aaaaagagaa
      121 actgtaatat acgaagtttt aactagtggt aatcaaccat tcacttatga gttacctaaa
      181 gatttatcgt cacataatgc gcgtaaatac ttggaattta tttcacaaaa attagatggc
      241 gataagttaa ccaaagaaga ttcattatga ttttactaaa caaaaaaacg cctactagtg
      301 tgaaaacgta ttgattaata gcgcctatat ggagttttaa tataaaaagt aagcaaagga
      361 gaaatgagaa tgaaaagatt gttaggttta ttattagtga gcacgttagt gttaagtgca
      421 tgtggaaatg atgagaatca ggaagaatct aaaaaagaag ttaaatcaaa agaaaagaaa
      481 attgagaagg aaaaggaaaa taaatcgaaa aaagataagg aaaaagaagt tgcaacacaa
      541 caacaaccag acaatcaaac cgttgaacaa ccccaatcac aagagcaatc ggttcaacaa
      601 ccgcaacaac agataccaca aaatagtgtt cctcagcaaa atgtccaagt tcaacaaaac
      661 aaaaagcaaa aagttgattt aaataatatg cctcccactg atttttctac agagggtatg
      721 tctgagcagg ctcaaaaaca aattgaagag ctttcaatgc aaaaagacta tcatggtctg
      781 tcacaaagag aatacaatga tagagtttct gaaattataa ataatgataa ttgattccac
      841 agggtagccc gcctaccctt attatttttt gccaattttg aggagggaac gcatgaaaac
      901 acgttgttac gatggtaaaa aatggcaata tgaatttaag catgaaggaa aaagataccg
      961 taagaaaggt tttagaacaa agcgtgaagc taattctgct ggactagaca agttaaatga
     1021 gttaagaagt ggttttaata tagataacta tataactctt gaagaatact tcgaaaattg
     1081 gattaaaaca tataaacaac ctgttgttaa agaaaatacc taccgtcatt atagaaatgc
     1141 attacaacat atacaaaaac ataaaatagg taaaatggag ttatcaaaga taaatagaca
     1201 agtttatcag aaattcataa acgactattc aaaagaacac gcaaaagaaa ctataagaaa
     1261 aacaaacggt gctattcggt cagctttaga tgacgcatta tatgatggac ttatttttaa
     1321 aaaccccgct tataaagtta attataaagc cggaaaacct acgaagtcag aacaagaaaa
     1381 attcatctcg gtaactgaat atgaaatact aaaagatcac gtcagaaaga agagaactcg
     1441 ttcatcatta gcgctattca taatgatttg tacgggttgt cgtgtcagtg gtgcaagaaa
     1501 tataaagatt gagcatatca accaagtgaa aaacactata tttattgacg agcgaaaaac
     1561 caatacttcc cctagatata tcagtatcgc taaatctgat atgaaacaca ttatggacgt
     1621 cataagtaca tttgcaatta gctatgatgg ttacattttc aaagaaggcg gatctataat
     1681 taaccttcat gctatcaata atgctttgaa atcagcctgt agagtcaata atataccaat
     1741 tattacatcg cacgcattaa gacacactca ttgttcttat ttactagcaa aaggtgtatc
     1801 tatacattac atttctaaaa gattaggtca taaaaatata gcaataacta catctgtgta
     1861 ttctcatttg ttagaagaaa aatttaatga agaggacaaa aaaacaacta aaattttaga
     1921 aagtatgtaa tttagggacc cattagggaa tccaaaccca ataaatactg ttgttacaag
     1981 gtttctatgt atccaaactg ggggcaatat aaacgcgctg atttaatcgg acaatcttct
     2041 tatattaaaa ataatgatgt cgtaatattc aatgaagcat ttgataatgg tgcatcagac
     2101 aaattattaa gtaatgtgaa aaaagaatat ccttatcaaa cacctgtact cggccgttct
     2161 caatcagggt gggacaaaac tgaaggtagc tactcatcaa ctgttgcaga agatggtggc
     2221 gtagcgattg taagtaaata tcctattaaa gaaaaaatcc agcatgtttt caaaagcggt
     2281 tgtggattcg ataatgatag caacaaaggc tttgtttata caaaaataga gaaaaatggt
     2341 aagaacgttc acgttatcgg tacacataca caatctgaag attcacgttg tggtgctgga
     2401 catgatcgaa aaattagagc tgaacaaatg aaagaaatca gtgactttgt taaaaagaaa
     2461 aatatcccta aagatgaaac ggtatatata ggtggcgacc ttaatgtcaa taaaggcact
     2521 ccagagttca aagatatgct taaaaacttg aatgtaaatg atgttctata tgcaggtcat
     2581 aatagcacat gggaccctca atcaaattca attgcgaaat ataattaccc taatggtaaa
     2641 ccagaacatt tagactatat atttacagat aaagatcata aacaaccaaa acaattagtc
     2701 aatgaagttg tgactgaaaa acctaagcca tgggatgtat atgcgttccc atattactac
     2761 gtttacaatg atttttcaga tcattaccca atcaaagcct atagtaaata gtgctcaact
     2821 aactaataac tcgcttcgtt ctaaaaggac gaagcgagtt atattgttaa aatttgaatt
     2881 gacttacatt ttaataaaat catcttaaca actttaattt ttcattaata caagtcttta
     2941 ctctacactc aaacaagatt catacactgc acgtcataat aaatctatct attcaaatat
     3001 aaataaaagt tacctactac attctatgta gcaggcaact tttattactt atttcttttc
     3061 attatcatta agtactttta caaacttcac attatgtgtc ttccaatcaa cttcatataa
     3121 tgctgataat ttttcttctt ttttatctac atggttttca ccagaccaat agccccagaa
     3181 accatggcga ttccaatcta ttttaaactc atccattgat cttttataat gaacaacaaa
     3241 ttgtgattta cctttgtctt ttttatcatg tgacataaca gctaaaaatt ctggattaaa
     3301 cccttcagac acagttacag gcattttgtc tttaggtgtg aaattatctt tcgcccataa
     3361 atttccattt cgtgttaaag aaaaaatttc acttttagtt ctattatcac tatcattagt
     3421 taattgtctc gtatggtcat gtcccatatt atttatcaaa tgtgcttcta ctttccaacc
     3481 tacaccttta tgtgacgtag attgatcaag taatgtacga tatgatggtt gttgataact
     3541 aatcgtctct gaataattac tctcttttgt aatatttcca gttaagcctc cacgattaat
     3601 cgaaaaatct ccacctgttt tataaccata cgtatattta acttctcttg attcatcctg
     3661 attttttggt gcaaagtcag tcacatttgt attgttgttg tcatcaacat tttgaattga
     3721 aactgaataa gatccaggcc atcttaatgt actattccaa taaccatttg ggtctaaaat
     3781 tctcaaacca ctaccaattg taccttttgc tttaataaat actgtttctt tatcataatt
     3841 aggttcagtt aagaaattaa attgtaagct ttgagtaata tttttttgac tatcacttgt
     3901 tgtagctgta cgtgtataca ttttagtatc accatcaaga ttcttctcag aaacttgttt
     3961 gatttcagaa ttaatctttg caaatgaagt agctggtaat acagtgaaag tagtcgatag
     4021 tgctaacgta caaattgtga tatttttaca tagttgttta atcattagta atccgccctt
     4081 tcaatattat ccttctttat aaggtttatt gtcatcagaa tatttatcaa cgactttaac
     4141 tgttttattt ttccaatcaa cttcataagt gacaattaat ctttgaccat ctttattttt
     4201 ttctaaaatt ggaggtgcat aatgtattcc aggtctgttt ttcaaaatat cttgatttcg
     4261 tgtgtatgtt acttcaaatt gcgttttctc atttgacttt tcattagata aataagttaa
     4321 aaattctgga ttaaagccac ttcttactaa tgctgggtat ctatattttg aagcaaagct
     4381 tagttcaggg ttttctacag tagcaattct cgtatttcta tagaataata attcatcatt
     4441 tctatttttc acttctccac catacttcaa gtcattcgca ataactgacc agtgtacatg
     4501 ccagttatta tttttaccgc tggcaattgt gtcataattt tgctgattat aactaatcgt
     4561 tttggagtag ctatttgatg aagttcgtcc aatacctttt gttgaatcga atttaccacc
     4621 tgagctatat gaaaatgtac tgtctacttt tgcagttgaa attttatttt tcggcaattg
     4681 gtctaatatt tcagttttac gatttctttt tacttgaaaa tctacatggt actcacttgg
     4741 atactttaac caatttgaat ttttttcttc tttatgagat tcaaacttta aatttgaatg
     4801 aattgagcct tgttttttaa caagtaatac attcttgtca taagttggat catcgataaa
     4861 gtcgaattgt aaattttgga gtatatttgt tttctcatca tatactgttt cagttcgttt
     4921 tgtgatttta ccgtttttcc caatatcatc cggtgctgtt gaatttttat ctttattagt
     4981 aacattacgt ttgtcttttt gttgagactt atcaacatgt tctttcttat tttggtcttg
     5041 agagtcttta tgagctgaat ttgcttgagt cgttgctgct gataacaata aaattgcaca
     5101 tgataatgat gacgctatta aaacacgttt tttatttttc attgttataa ccttctttcg
     5161 tatgattgat atttgttgat atgtatcgac atgtgaataa tatcacaaaa acagagaata
     5221 tatatttaac tatttattaa atgattttgt taatattatt aaatacttta tcctctttaa
     5281 aaataatgtg tgtacaaagt cattaattta gcaaatattt ttatttagta gttaataacc
     5341 atcgatttga aatttatata taattattag ctaaataata tcctgcatct ttctcataca
     5401 atttactata aaattaagca tatccgatat cagcgttaat aagatcgttg atactagaca
     5461 gttaatttca tagaacgaaa tcaaataaca cactactttc tgcattttaa attatgttta
     5521 agaataaaaa ttatgtttat ataaatatat atactacttt gaaaggtgtg agcttaatga
     5581 caacttttag tgaaaaagaa aaaattcaat tactagcaga tattgttgaa ctacaaactg
     5641 aaaataataa tgaaatagac gtttgtaatt atttaacaga tttattcgac aagtacgata
     5701 ttaaatctga aattttgaaa gttaatgaac accgcgccaa tatcgttgca gaaatcggta
     5761 acggctcacc tatactcgca ttgagtggtc atatggatgt tgttgatgca ggaaatcaag
     5821 ataattggtc atatccccct tttcaactga cagaaaaaga tggcaaatta tatggccgag
     5881 gcactacaga tatgaaaggc ggtttaatgg ctttggtcgt atctctaatc gaattaaaag
     5941 aacaaaatga attgcctcat ggaacgatta gattactggc tactgctggc gaagagaaag
     6001 aacaagaagg tgccaaatta ttagctgata aaggctattt agacgatgtc gatggcttaa
     6061 ttattgctga accaactgga tctggaattt attatgcaca taaggggtct atgtcatgta
     6121 aagtaactgc aactggtaaa gctgtccata gctcagttcc atttattggt gacaatgcaa
     6181 ttgatacact gcttgaattt tataatctat ttaaagaaaa atattcagag cttaaacaac
     6241 aagatactaa acatgaatta gatgttgcgc ctatgttcaa atcattgatt ggaaaagaaa
     6301 tttctgaaga ggatgcaaat tatgcatctg gtcttacagc tgtatgttcg attataaatg
     6361 gcggcaaaca atttaactct gtaccagatg aagcttcact tgaatttaac gtaagaccag
     6421 ttcctgagta tgataacgac tttatagaat cgtttttcca aaatatcatt aatgatgtgg
     6481 atagcaataa gctttcactc gatattccaa gcaatcaccg acctgtaaca agcgataaaa
     6541 atagcaaatt aattactacg attaaagatg tagcttctag ttatgtagaa caagacgaaa
     6601 tatttgtttc agcgcttgta ggtgcaacag atgcctctag tttcttagga gataataagg
     6661 acaatgttga tttagccatt tttggaccag gtaatccatt aatggcacat caaatcgatg
     6721 aatatattga aaaagatatg tatctgaaat atattgatat ttttaaagag gcttccattc
     6781 aatatttaaa agaaaaataa gaacgatgct gtcagctgcc ctattcgcgt gctggcagtt
     6841 ttttattgcg aattttaagt tgatagaaat agcgatgaat attgtttgaa tgtaaatatt
     6901 caaatatcaa caagcacatt ttcattgatt aagtgatgta aaactgaaat tattgtgctg
     6961 atttgtcata catatattga ctaatggtca tataaaaaga tagcttctaa tagttacata
     7021 aaactcgtaa aaaccttctc gtaaaaggaa tgggacataa atccctagaa aacagcagct
     7081 caacgagctg taaattatca aatacatttg aaaaaagctg atttctatca aataatttat
     7141 agaaatcagc ttttttacat tgtctaagaa cttaatgtct c
//
LOCUS       DALPQQ010000117         6988 bp    DNA     linear   BCT 22-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus strain K18-6-464
            SAMD00233528-rid16434743.denovo.118, whole genome shotgun sequence.
ACCESSION   DALPQQ010000117 DALPQQ010000000
VERSION     DALPQQ010000117.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMD00233528
            Sequence Read Archive: DRR236061
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 6988)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6988)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001543423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001543423.1
            Genome Coverage       :: 77x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/22/2022 17:09:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,811
            CDSs (total)                      :: 2,743
            Genes (coding)                    :: 2,689
            CDSs (with protein)               :: 2,689
            Genes (RNA)                       :: 68
            rRNAs                             :: 2, 4, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 4, 2 (16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 54
            CDSs (without protein)            :: 54
            Pseudo Genes (ambiguous residues) :: 0 of 54
            Pseudo Genes (frameshifted)       :: 27 of 54
            Pseudo Genes (incomplete)         :: 27 of 54
            Pseudo Genes (internal stop)      :: 10 of 54
            Pseudo Genes (multiple problems)  :: 10 of 54
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6988
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMD00233528-rid16434743.denovo.118"
                     /strain="K18-6-464"
                     /db_xref="taxon:1280"
                     /geo_loc_name="Japan: Niigata"
     gene            complement(<1..1279)
                     /locus_tag="O7798_002154"
     CDS             complement(<1..1279)
                     /locus_tag="O7798_002154"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500308.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid permease"
                     /protein_id="HDC2864379.1"
                     /translation="MAEKLQRELSNRHIQLIAIGGAIGTGLFLGAGQTIALTGPSILL
                     TYIIIGFMLFMFMRGLGEIIIQNTEFKSFADVTNTYIGPFAGFVTGWTYWFCWIITGM
                     AEVTAVAKYVSFWFPEIPNWISALFCVLLLMSFNLLSARLFGELEFWFSIIKIATIIG
                     LIVVGFVMILFAFKTQFGHASFTNLYEHGIFAKGASGFFMSFQMALFSFVGIEMIGVT
                     AGETKDPVKTIPKAINSVPIRILIFYVGALAVIMSIIPWQQVDPDNSPFVKLFALIGI
                     PFAAGLINFVVLTAAASSCNSGIFSNSRMLFGLSSQQQAPPNFSKTNKYGVPHVAIFA
                     SSALLLVAALLNYIFPDATKVFTYVTTISTVLFLVVWGLIIIAYINYSRKNPDLHKNA
                     TYKLLGGKYMGYLIFVFFIFVFGLLFINVDTRRA"
     gene            1627..2748
                     /locus_tag="O7798_002155"
     CDS             1627..2748
                     /locus_tag="O7798_002155"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001662816.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="citrate synthase"
                     /protein_id="HDC2864380.1"
                     /translation="MAELQRGLEGVIAAETKISSIIESQLTYAGYDIDDLAENAQFEE
                     VIFLLWNYRLPNEEELAHLKGKLNQYMTLNPRVYTHFEEYVTDHVHPMTALRTSLSYI
                     AHFDPDAENESDENRYERAMRIQAKVASLVTAFARVRQDKEPLKPNPDLSYAANFLYM
                     LRGELPTDIEVEAFNKALILHADHELNASAFTARCAVSSLSDMYSGIVAAVGSLKGPL
                     HGGANEQVMTMLSEIGSIENVDAYLDEKFANKDKVMGFGHRVYKDGDPRAKYLREMSR
                     QITKDAGREELFEMSVKMEKRMAEEKGLIPNVDFYSASVYHCMEIPHDLFTPIFAVSR
                     SAGWIAHILEQYKDNRIMRPRAKYIGETNRKYIPLEERK"
     gene            2797..4065
                     /gene="icd"
                     /locus_tag="O7798_002156"
     CDS             2797..4065
                     /gene="icd"
                     /locus_tag="O7798_002156"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500306.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADP-dependent isocitrate dehydrogenase"
                     /protein_id="HDC2864381.1"
                     /translation="MTAEKITQGTEGLNVPNEPIIPFIIGDGIGPDIWKAASRVIDAA
                     VEKAYNGEKRIEWKEVLAGQKAFDTTGEWLPQETLDTIKEYLIAVKGPLTTPIGGGIR
                     SLNVALRQELDLFTCLRPVRWFKGVPSPVKRPQDVDMVIFRENTEDIYAGIEFKEGTT
                     EVKKVIDFLQNEMGATNIRFPETSGIGIKPVSKEGTERLVRAAIQYAIDNNRKSVTLV
                     HKGNIMKFTEGSFKQWGYDLALSEFGDQVFTWQQYDEIVENEGRDAANAAQEKAEKEG
                     KIIIKDSIADIFLQQILTRPAEHDVVATMNLNGDYISDALAAQVGGIGIAPGANINYE
                     TGHAIFEATHGTAPKYAGLNKVNPSSVILSSVLMLEHLGWQEAADKITDSIEDTIASK
                     VVTYDFARLMDGAEEVSTSAFADELIKNLK"
     gene            4455..5159
                     /locus_tag="O7798_002157"
     CDS             4455..5159
                     /locus_tag="O7798_002157"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500304.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HDC2864382.1"
                     /translation="MSQKVLVVDDEHSIVTLLKYNLETAGYEVVVAFDGDEALEKVES
                     EQPDLIILDVMLPKKDGIDVCKTVRTNKNLVPILMLTAKNDEFDRVLGLELGADDYMT
                     KPFSPREVVARVKAILRRSQFVKEVEEIDDDITIGSIRIRPDYFEVYKHNELLELTPK
                     EFELLLYLIERQGRVITREHMLNTVWNYEFAGDSRIVDVHISHLRDKLEDNPKKPQLI
                     KTVRGLGYKLERPKEQ"
     gene            5159..6820
                     /locus_tag="O7798_002158"
     CDS             5159..6820
                     /locus_tag="O7798_002158"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500303.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PAS domain S-box protein"
                     /protein_id="HDC2864383.1"
                     /translation="MKFHHRLMLLISSILIISFVTLGIIIHASITYVLSEKHEQALAT
                     DARSYIYLVQDNEIDKVKKIVKQQNIDLLITKHDKKVFSSGKLKAIPNSDSYIQKRDV
                     FIFNKKVNGYHVWIKGYNNDITEMHWTLWKYLILTCLVVLICLYFASRSFKRTLIRPI
                     QEVTYATQLLANGYYHIRVPESNVVETKALFVSTNDLARRLQKLNNEQKIQSNRLKTT
                     IENIPSAILMIDRNGKIVVANKAYYEQFNISHNIEQVGYHGYVNTEIEQLILESFKVE
                     KPIYEQLEVAINQVHAKYFDISCVPILTRSQKSLQGILVVMHDITNLKQLENLRREFV
                     ANVSHELKTPITSIKGFAETLIDGAKNDAESLDMFLNIILKESNRIESLVTDLLDLSH
                     IEQHTELDTDYMNLSDLTRRIIDNMMTQANQKNISIHTDIEKDVIVKAQESKIAQVIT
                     NLLTNAINYSYEDGDINVRVYRDDFRVIFEVQDFGIGIKLEDQQRIFERFYRVDKARS
                     RDSGGTGLGLSITKHIVEAHQGNIEVNSQVGKGSTFKVILKDYKE"
BASE COUNT         2508 a         1004 c         1314 g         2162 t
ORIGIN      
        1 ttgcacgtct tgtatcaaca ttaataaata ataacccgaa cacaaaaatg aagaatacaa
       61 atattaagta gcccatatat ttgccaccta atagtttgta cgtagcattt ttatgtagat
      121 ctgggttttt acgactataa ttgatatatg caatgataat cagaccccat acaactaaaa
      181 ataacactgt agagatggta gtcacatacg taaatacttt tgtcgcatct gggaaaatat
      241 agtttagtaa tgctgccaca agtaataatg ctgatgaagc aaagattgca acatgtggaa
      301 cgccatattt attcgtctta gaaaagttcg gaggtgcttg ttgttgactt gataaaccga
      361 aaagcatacg gctatttgag aatataccac tgttacatga tgaagcagca gcggttaata
      421 ctacaaaatt aatcaagccc gcagcaaacg gaattccgat caatgcgaat aattttacga
      481 atggactgtt atcaggatca acttgctgcc aagggataat agacatgata accgctaacg
      541 ccccaacgta aaatattaaa attctaatgg gtacactgtt aattgctttt ggaattgttt
      601 taactggatc ttttgtttcc ccagctgtaa caccaatcat ttcaattcct acaaatgaga
      661 atagtgccat ttggaaagac ataaagaatc cagaagcacc tttagcgaat atgccgtgtt
      721 catatagatt tgtgaaactg gcatgcccga attgagtttt aaatgcaaat agaatcatga
      781 cgaaaccaac tactattaaa ccaataattg tcgctatttt aatgatagag aaccaaaatt
      841 ctaattctcc gaaaagtctt gcgctaagta ggttgaatga cattaataac agtacacaaa
      901 atagtgcact tatccagttt ggaatttctg ggaaccaaaa gctaacatat tttgccacag
      961 ccgttacttc agccatacct gtaataatcc aacagaacca gtatgtccat ccggtaacaa
     1021 atcctgcaaa aggcccaata tatgtattgg ttacatctgc gaaagattta aattcagtat
     1081 tctgtataat gatttctcct aaacctcgca taaacataaa taacataaat cctataatga
     1141 tgtatgttaa tagaattgaa gggccggtta atgcaatcgt ttgaccagca cctaagaata
     1201 agcctgtacc aattgcaccg ccaattgcaa ttaattgtat gtggcgattg ctcagttccc
     1261 tttgtaattt ttcagccata atacatctcc cttaaatata gatatgttta ttatgcactt
     1321 atattgagat atatacaatt attttcggta aaaatgtgta aaattccatg ttaatatact
     1381 ttggttttta taatcatata taataaccaa ttgaaaattt aattctattg taaaattcat
     1441 ggattattca catcttgaaa aagctttaat ggtgctattt gtggctattc tgtgacattt
     1501 acatagattt acaaaaaaat tgttgcacat ataatgccag tttttatatt tcacaaacga
     1561 aatgcgttta gctataatat tagttgaaag ccatttcata aagaaacagt aaaggggaaa
     1621 tttatcatgg cagaattaca aagaggttta gaaggggtta tcgcagcgga gactaaaata
     1681 agttcaatta ttgaaagtca attgacttat gccggctatg atattgatga tctagctgaa
     1741 aatgcgcaat ttgaagaagt tattttccta ttatggaact atagattgcc aaacgaagaa
     1801 gagcttgctc atctaaaagg gaaattaaat caatacatga cattaaatcc tcgtgtgtat
     1861 acacattttg aggagtatgt tacagatcac gtgcatccaa tgacagcatt acgtacgtca
     1921 ttatcatata ttgcacattt cgatcctgat gctgaaaatg aatcagatga aaatcgttat
     1981 gaaagagcaa tgcgtataca ggctaaagta gcatcattag ttacagcgtt tgctcgagta
     2041 agacaagata aagaaccact taagcctaat cctgacttaa gttatgcggc aaacttccta
     2101 tatatgttac gtggggaatt accaacagat atagaagtag aagccttcaa taaagcactt
     2161 attttacacg ctgatcatga gttgaacgca tctgcattta cggcacgttg tgcggtatca
     2221 tcattgtcag atatgtactc aggtattgta gcagccgtag gttctctgaa agggccatta
     2281 catggtggtg caaacgaaca agttatgacg atgttatctg agattgggtc aattgaaaat
     2341 gttgatgctt acttagatga aaaatttgct aataaagata aagtaatggg cttcggtcat
     2401 cgtgtatata aagatggtga tcctagagcg aaatatttaa gagaaatgag ccgtcaaatt
     2461 acgaaagacg ctggtcgtga agaattattt gaaatgtcag tgaaaatgga aaaacgtatg
     2521 gcagaagaaa aaggattaat tcctaatgtt gatttttata gtgcgagtgt ttatcactgt
     2581 atggaaatac ctcatgactt attcacgcca atctttgctg taagtcgttc tgcaggatgg
     2641 attgctcata ttttagaaca atataaagat aatagaatta tgcgtcctag agcgaaatat
     2701 attggcgaaa cgaatcgtaa gtatatcccg cttgaagaaa gaaaataatc aatacaaatt
     2761 aaaaatgaag atgtaaaatt tggaggtaaa ataactatga ctgcagaaaa aattactcaa
     2821 ggaactgaag gattaaacgt acctaatgaa ccaattatcc catttattat cggtgatgga
     2881 attggaccgg atatttggaa ggcagcaagc cgagttatag atgctgctgt tgagaaagcc
     2941 tataatggcg aaaaacgcat tgaatggaaa gaagtgctag ctggccaaaa agcatttgat
     3001 acaactggtg aatggttacc tcaagaaaca cttgatacaa ttaaagaata tttaattgct
     3061 gttaaaggac ctttaacaac accaattggt ggtggtatta gatcattaaa tgtggcttta
     3121 cgccaagaat tagatttatt tacttgctta agaccggtac gttggtttaa aggagtacca
     3181 tcacctgtta aacgtccaca agatgttgat atggttattt tccgtgaaaa tactgaagac
     3241 atttatgctg gtattgaatt taaagaaggt acaacagaag ttaaaaaggt aattgacttc
     3301 ttacaaaacg aaatgggtgc gacaaacatt cgattcccag aaacttcagg tattggtatt
     3361 aaaccagttt ctaaagaagg aactgagcga ttagttagag cagctataca atatgctatc
     3421 gataataacc gtaaatcagt tactttagtt cataaaggta atattatgaa atttacagaa
     3481 ggctcattta agcagtgggg ttacgattta gcattatctg aatttggtga tcaagtattc
     3541 acttggcaac aatatgacga aattgttgaa aatgaaggca gagatgctgc taatgctgct
     3601 caagaaaaag ctgaaaaaga aggcaagatt atcattaaag attctattgc tgacattttc
     3661 ttacaacaaa ttttaactcg tccagctgag catgatgttg tagcaactat gaacttgaat
     3721 ggtgactata tttcagatgc tttagctgca caagttggtg gtattggtat tgcgccaggt
     3781 gcaaacatta attatgaaac aggtcatgct atttttgaag caacacatgg tacagctcca
     3841 aaatatgcag gtttaaataa agtgaatcca tcttcagtaa ttttaagttc tgtattaatg
     3901 ttagaacatt taggatggca agaagcggca gataagatta cagattcaat tgaagataca
     3961 attgcttcaa aagttgttac ttatgacttt gcccgtttaa tggatggtgc tgaagaagtt
     4021 tctacatcag catttgcaga tgaattgatt aaaaatttaa aataagcaaa ataaaattag
     4081 gtgagtctag caactttaat tgctaggttc gcctttttaa atgaattgaa gttggcaaca
     4141 ggatagaaat aataaagagt caccaatgat tgattatgta gtgtttctta cacattagac
     4201 aaagcgaata tgtacataag cttaggaata aatgagtaaa actcatgcat aggtagtggg
     4261 atagaaatgc tatttttaca aaatttattt cgttgtccca gagtaagtca tgcaaatgat
     4321 agaaggaaat ataagaagta ttttatttat atgtaaagta atgtaaaaaa tgtgtaaaga
     4381 taatgtgtag gatgttattt ttataaatag ttcggttata atgtaaatat aattataagt
     4441 tagggaggca taccatgtcg caaaaagtgt tggtagtaga tgacgaacat tcaatcgtaa
     4501 cattacttaa atataactta gaaacagctg gttatgaagt tgttgtcgca tttgatggtg
     4561 atgaggcttt agaaaaggta gaaagtgaac agccagattt aattatttta gatgttatgc
     4621 tacctaaaaa agatggcatt gacgtatgta agactgtaag aacaaataaa aatttagtcc
     4681 ctatattaat gttaacggcg aaaaatgatg aatttgatcg ggtattaggt ttagaattag
     4741 gtgccgatga ctatatgact aagccttttt cacctagaga agttgttgcc cgtgtgaaag
     4801 ccattttaag acgttctcaa tttgtaaaag aagtagaaga gattgacgat gatattacca
     4861 tcggatcgat acgtattaga cccgattatt ttgaagtata taagcataat gagttattgg
     4921 agctaacacc gaaagaattt gaactcttgc tttatttgat agaaagacaa ggcagagtca
     4981 ttacgagaga gcatatgtta aatacggtat ggaattatga atttgcagga gactcaagaa
     5041 ttgttgatgt acatatcagt catttaagag ataaattaga agataatcct aagaagccac
     5101 aacttattaa aactgtgcgt ggcttaggct ataaattgga aagacctaaa gaacaatgat
     5161 gaagtttcac caccgcttaa tgttattgat aagcagtata ttaattatca gttttgttac
     5221 attaggcatt attattcacg cttccatcac atatgtttta tcagaaaaac acgaacaagc
     5281 tctagcaaca gatgcaagat catatattta tttagtccaa gataatgaga ttgataaagt
     5341 taaaaaaatt gtaaaacagc aaaatataga tttattgata actaagcatg ataaaaaggt
     5401 gtttagtagt ggcaaactga aagctatccc aaatagtgat agctatattc aaaaaaggga
     5461 cgtttttatt tttaataaga aggttaacgg ttatcatgta tggattaaag gttacaataa
     5521 cgatattaca gaaatgcatt ggacgttgtg gaaatatctt attttgacat gtttagttgt
     5581 actcatttgt ctgtattttg caagccgtag ttttaagcgt acattaatcc gtcccattca
     5641 agaagttact tatgcaacac aattgttggc aaatggttat tatcacatac gtgtacctga
     5701 aagtaatgtt gtagaaacta aagcgctttt tgtgtctacc aatgatttag cacgacgcct
     5761 tcaaaagctt aataatgagc aaaaaattca atccaaccgt ttaaaaacaa cgattgaaaa
     5821 tattccaagt gctattttaa tgatagatcg aaatggaaaa atcgttgttg caaataaagc
     5881 gtattatgaa cagttcaaca tctcgcataa tattgaacaa gtaggctatc acggctatgt
     5941 taatactgaa attgagcaat taattttaga aagttttaaa gttgaaaaac ctatttatga
     6001 acaattggaa gttgcaataa accaagtcca tgccaagtac tttgatattt catgcgttcc
     6061 gattttaact aggtctcaaa aaagtttgca agggatttta gttgtgatgc atgatataac
     6121 aaatctgaaa caacttgaaa atctaagacg tgaatttgta gcaaatgttt cacatgaatt
     6181 aaaaacacct attacttcaa ttaaggggtt tgctgaaacg cttattgatg gtgcaaaaaa
     6241 tgatgcggaa tcattagaca tgtttttaaa cataatttta aaagaatcaa atcgaataga
     6301 atctttagta acagatctgt tagatttatc gcatattgag caacatacag agttagatac
     6361 agactatatg aatttatcag atttaacgcg gcgtattatt gataatatga tgactcaagc
     6421 caatcaaaaa aatatttcca ttcatactga tattgaaaaa gatgtcattg ttaaagcaca
     6481 agaaagtaaa attgctcaag ttatcacgaa tttgttaacg aatgcaatta actattctta
     6541 tgaagatgga gatattaacg ttcgtgtgta tcgagatgac tttcgtgtca ttttcgaagt
     6601 acaagatttt ggtataggta ttaaattaga agaccaacaa cgtatttttg aaagatttta
     6661 tagagtagat aaagcacgaa gtagagattc tggtgggaca ggtcttggat tatcaattac
     6721 aaagcatata gtagaggccc accaaggcaa tattgaagtg aatagtcaag ttggcaaagg
     6781 ctcaacgttc aaagttattc taaaagatta taaagaataa aaattaaagt ggtaacagcg
     6841 cgtgtatttt tcacgaagtt gttgctgctt ttttatttcg ttcaaatctc tattggtatt
     6901 aaattagagt taatgaagtg gaataaattc ggttgtcaat tttgtcattt gtatatgtcg
     6961 atttgtaagt tataagtaat agattgtt
//
LOCUS       DALPQQ010000118         6923 bp    DNA     linear   BCT 22-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus strain K18-6-464
            SAMD00233528-rid16434743.denovo.119, whole genome shotgun sequence.
ACCESSION   DALPQQ010000118 DALPQQ010000000
VERSION     DALPQQ010000118.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMD00233528
            Sequence Read Archive: DRR236061
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 6923)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6923)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001543423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001543423.1
            Genome Coverage       :: 77x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/22/2022 17:09:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,811
            CDSs (total)                      :: 2,743
            Genes (coding)                    :: 2,689
            CDSs (with protein)               :: 2,689
            Genes (RNA)                       :: 68
            rRNAs                             :: 2, 4, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 4, 2 (16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 54
            CDSs (without protein)            :: 54
            Pseudo Genes (ambiguous residues) :: 0 of 54
            Pseudo Genes (frameshifted)       :: 27 of 54
            Pseudo Genes (incomplete)         :: 27 of 54
            Pseudo Genes (internal stop)      :: 10 of 54
            Pseudo Genes (multiple problems)  :: 10 of 54
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6923
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMD00233528-rid16434743.denovo.119"
                     /strain="K18-6-464"
                     /db_xref="taxon:1280"
                     /geo_loc_name="Japan: Niigata"
     gene            89..1351
                     /gene="femA"
                     /locus_tag="O7798_002159"
     CDS             89..1351
                     /gene="femA"
                     /locus_tag="O7798_002159"
                     /EC_number="2.3.2.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499900.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycine glycyltransferase FemA"
                     /protein_id="HDC2864384.1"
                     /translation="MKFTNLTAKEFGAFTDSMPYSHFTQTVGHYELKLAEGYETHLVG
                     IKNNNNEVIAACLLTAVPVMKVFKYFYSNRGPVIDYENQELVHFFFNELSKYVKKHRC
                     LYLHIDPYLPYQYLNHDGEITGNAGNDWFFDKMSNLGFEHTGFHKGFDPVLQIRYHSV
                     LDLKDKTADDIIKNMDGLRKRNTKKVKKNGVKVRFLSEEELPIFRSFMEDTSESKAFA
                     DRDDKFYYNRLKYYKDRVLVPLAYINFDEYIKELNEERDILNKDLNKALKDIEKRPEN
                     KKAHNKRDNLQQQLDANEQKIEEGKRLQEEHGNELPISAGFFFINPFEVVYYAGGTSN
                     AFRHFAGSYAVQWEMINYALNHGIDRYNFYGVSGKFTEDAEDAGVVKFKKGYNAEIIE
                     YVGDFIKPINKPVYAAYTALKKVKDRIF"
     gene            1370..2629
                     /gene="femB"
                     /locus_tag="O7798_002160"
     CDS             1370..2629
                     /gene="femB"
                     /locus_tag="O7798_002160"
                     /EC_number="2.3.2.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499901.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycine glycyltransferase FemB"
                     /protein_id="HDC2864385.1"
                     /translation="MKFTELTVTEFDNFVQNPSLESYYFQVKENIVTRENDGFEVVLL
                     GIKDDNNKVIAASLFSKIPTMGSYVYYSNRGPVMDFSDLGLVDYYLKELDKYLQQHQC
                     LYVKLDPYWLYHLYDKDIVPFEGREKNDALVNLFKSHGYEHHGFTTEYDTSSQVRWMG
                     VLNLEGKTPETLKKTFDSQRKRNINKAINYGVKVRFLERDEFNLFLDLYRETEERAGF
                     VSKTDDYFYNFIDTYGDKVLVPLAYIDLDEYVLKLQQELNDKENRRDQMMAKENKSDK
                     QMKKIAELDKQIDHDQHELLNASELSKTDGPILNLASGVYFANAYEVNYFSGGSSEKY
                     NQFMGPYMMHWFMINYCFDNGYDRYNFYGLSGDFTENSEDYGVYRFKRGFNVQIEELI
                     GDFYKPIHKVKYWLFTTLDKLRKKLKK"
     gene            3312..4079
                     /locus_tag="O7798_002161"
     CDS             3312..4079
                     /locus_tag="O7798_002161"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499902.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Cof-type HAD-IIB family hydrolase"
                     /protein_id="HDC2864386.1"
                     /translation="MRFVFDIDGTLCFDGRLIDQTIIDTLLQLQHDGHELIFASARPI
                     RDLLPVLPSVFHQHTLIGANGAMISQQSKISVIKPIHTDTYHHIFKIIQKYELDYIID
                     DDWNYAAQLDAENAIFERLDPHKLASCIDVANIDTPIKIILLNIDPAQITTILDELDK
                     YHQELEMIHHSNEYNIDITAQNINKYTALQYIFDADVKYIAFGNDHNDIVMLQHASSG
                     YIIGPSEAYTHAILKLDKIKHINNNAQAICKVLKSYK"
     gene            complement(4127..4600)
                     /locus_tag="O7798_002162"
     CDS             complement(4127..4600)
                     /locus_tag="O7798_002162"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499903.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SWIM zinc finger family protein"
                     /protein_id="HDC2864387.1"
                     /translation="MGLLDIASIRSIERGFNYYQSECVINLKSFSETQHEAEVKGSGN
                     KVYRCYIDMEHPRKSICNCPHADGRRVICKHMIALLFTASPEAANKHIMMLNEVEEDY
                     QLRRNMWIDSLKEMINDMSEEELRDAYLNMLIEHGEMAELFGLDEEEEMFEDEFY"
     gene            complement(4724..5425)
                     /locus_tag="O7798_002163"
     CDS             complement(4724..5425)
                     /locus_tag="O7798_002163"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499904.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HDC2864388.1"
                     /translation="MIELKHVTFGYNKKQMVLQDINITIPDGENVGILGESGCGKSTL
                     ASLVLGLFKPVKGEIYLSDNAVLPIFQHPLTSFNPDWTIETSLKEALYYYRGLTDNTA
                     QDQLLLQHLSTFELNAQLLTKLPSEVSGGQLQRFNVMRSLLAQPRVLICDEITSNLDV
                     IAEQNVINILKAQTITNLNHFIVISHDLSVLQRLVNRIIVLKDGMIVDDFAIEELFNV
                     DRHPYTKELVQAFSY"
     gene            complement(5418..6191)
                     /locus_tag="O7798_002164"
     CDS             complement(5418..6191)
                     /locus_tag="O7798_002164"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499905.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HDC2864389.1"
                     /translation="MSLIDIQNLTIKNTSEKSLIKGIDLKIFSQQINALIGESGAGKS
                     LIAKALLEYLPFDLSCTYDSYQFDGENVSRLSQYYGHTIGYISQNYAESFNDHTKLGK
                     QLTAIYRKHYKGSKEEALSKVDKALSWVNLQSKDILNKYSFQLSGGQLERVYIASVLM
                     LEPKLIIADEPVASLDALNGNQVMDLLQHIVLEHGQTLFIITHNLSHVLKYCQYIYVL
                     KEGQIIERGNINHFKYEHLHPYTERLIKYRTQLKRDYYD"
     gene            complement(6178..>6923)
                     /locus_tag="O7798_002165"
     CDS             complement(6178..>6923)
                     /locus_tag="O7798_002165"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499906.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HDC2864390.1"
                     /translation="SSENATKVNLSQTFEPISWLHLLGTDDYGRDLFTRIIIGARSTL
                     FVTVLTLIAIVVIGVTLGLFAGYKKGWIERLVLRFIDVGLSIPEFIIMIALASFFQPS
                     LWNLVISITLIKWMNYTRLTRSIVNSEMNKPYIKMAQLFHVPTRTILIRHLTPKIIPA
                     IIVLMVVDFGKIILYISSLSFIGLGAQPPTPEWGAMLQQGRDFISSHPIMLIAPASVI
                     AITILIFNLTGDALRDRLLKQRGEYDESH"
BASE COUNT         2457 a         1077 c         1088 g         2301 t
ORIGIN      
        1 ttatttttga catttgcaga ggggaaatag aaaaactgca aatacggaaa tgaaattaat
       61 taacgagaga caaataggag taatgataat gaagtttaca aatttaacag ctaaagagtt
      121 tggtgccttt acagatagca tgccatacag tcatttcacg caaactgttg gccactatga
      181 gttaaagctt gctgaaggtt atgaaacaca tttagtggga ataaaaaaca ataataacga
      241 ggtcattgca gcttgcttac ttactgctgt acctgttatg aaagtgttca agtattttta
      301 ttcaaatcgc ggtccagtga ttgattatga aaatcaagaa ctcgtacact ttttctttaa
      361 tgaattatca aaatatgtta aaaaacatcg ttgtctatac ctacatatcg atccatattt
      421 accatatcaa tacttgaatc atgatggcga gattacaggt aatgctggta atgattggtt
      481 ctttgataaa atgagtaact taggatttga acatactgga ttccataaag gatttgatcc
      541 tgtgctacaa attcgttatc actcagtgtt agatttaaaa gataaaacag cagatgacat
      601 cattaaaaat atggatggac ttagaaaaag aaacacgaaa aaagttaaaa agaatggtgt
      661 taaagtaaga tttttatctg aagaagaact accaattttt agatcattta tggaagatac
      721 gtcagaatca aaagcttttg ctgatcgtga tgacaaattt tactacaatc gcttaaaata
      781 ttacaaagac cgtgtgttag tacctttagc gtatatcaac tttgatgaat atattaaaga
      841 actaaacgaa gagcgtgata ttttaaataa agatttaaat aaagcgttaa aggatattga
      901 aaaacgtcct gaaaataaaa aagcacataa caagcgagat aacttacaac aacaacttga
      961 tgcaaatgag caaaagattg aagaaggtaa acgtctacaa gaagaacatg gtaatgaatt
     1021 acctatctct gctggtttct tctttatcaa tccatttgaa gttgtttatt atgctggtgg
     1081 tacatcaaat gcattccgtc attttgccgg aagttatgca gtgcaatggg aaatgattaa
     1141 ttatgcatta aatcatggca ttgaccgtta taatttctat ggtgttagtg gtaaatttac
     1201 agaagatgct gaagatgctg gtgtagttaa attcaaaaaa ggttacaatg ctgaaattat
     1261 tgaatatgtt ggtgacttta ttaaaccaat taataaacct gtttacgcag catataccgc
     1321 acttaaaaaa gttaaagaca gaatttttta ggaagggaat tatcaaaaca tgaaatttac
     1381 agagttaact gttaccgaat ttgacaactt tgtacaaaat ccatcattgg aaagttatta
     1441 tttccaagta aaagaaaata tagttacccg tgagaatgat ggctttgaag tagttttatt
     1501 aggtattaaa gacgacaata acaaagtaat tgcagcaagc cttttctcta aaattcctac
     1561 tatgggaagt tatgtttact attcgaatcg tggtccagta atggattttt cagatttagg
     1621 attagttgat tattatttaa aagagttaga taaatattta cagcaacatc aatgtttata
     1681 tgttaaatta gatccgtatt ggttatatca tctatatgat aaagatatcg tgccatttga
     1741 aggtcgcgag aaaaatgatg ccctagtaaa cttgtttaaa tcacatggtt acgagcatca
     1801 tggctttaca actgagtatg atacatcgag ccaagtacga tggatgggcg tattaaacct
     1861 tgaaggtaaa acacccgaaa cattgaaaaa gacatttgat agtcaacgta aacgtaatat
     1921 taataaagcg ataaactatg gtgttaaagt cagattcctt gaacgtgatg agttcaatct
     1981 tttcttagat ttatatcgtg aaactgaaga gcgtgctgga tttgtatcaa aaacagatga
     2041 ttatttttat aactttattg acacatatgg agataaagta ttagtaccat tagcatatat
     2101 tgaccttgat gaatatgtgt taaagttgca acaggaattg aatgacaaag aaaatcgtcg
     2161 tgatcaaatg atggcgaaag aaaacaaatc agataagcaa atgaagaaaa ttgcagaatt
     2221 agataagcaa attgatcatg atcagcatga attattgaat gcaagtgaat tgagcaaaac
     2281 ggacggccca attctaaacc ttgcttctgg cgtttatttt gcaaatgcat atgaagtgaa
     2341 ttatttctct ggtggttcat cagaaaaata taatcaattt atgggaccat acatgatgca
     2401 ttggtttatg attaactatt gcttcgataa tggctatgat cgttataatt tctatggttt
     2461 atcaggtgat tttacggaaa acagtgaaga ttatggcgta taccgcttta aacgtggatt
     2521 taatgtacaa atcgaagaat taatagggga tttctataaa ccaattcata aagtgaaata
     2581 ttggttgttc acaacattgg ataaattacg taaaaaatta aagaaataga tgtaaatgat
     2641 gttagggctt atagttattg atactatagg ctctttttta tatgtttttt aataaagcct
     2701 cgaataatga tatattaaat gacaagttta acaagtgatt gcaataaata taaatatgaa
     2761 ttgcacaacc tatttgtaaa tgattgagtt gagtatactt tttaattcat tcaatatgac
     2821 tcaaaacaag ccaatatgta ttatattttt ggtgaataaa ccttagcata acaatttatg
     2881 tctgattata tatgtgtgtg tttgcaagtg tgtgatatca aatgtcatat ttgtctaatt
     2941 gtaatttata aaatgcatga gcaatgattg ctgtaacaaa ttctagcaaa gtattcagtt
     3001 tgtattttag aaataaaaat gatgatagat gtatgatcga tataaaagat ttaatatgca
     3061 ccaaaacgtg agtaattggt ttaatgaaac ataacatgaa tgtaaattta gcttactgac
     3121 ataaacacta cacaaacata cagttatata agtcccctta tggaatttca cattctagtt
     3181 tacataatat atattatagg aagttatatg tgtgtaacgc aaaaggtacc ctacatcata
     3241 atcattatct aatatcgtca cataacttac ttatgctata atcatggtat tatattgttt
     3301 ggagtgattt gatgagattt gtctttgata ttgatggtac gctttgtttt gacggccgat
     3361 taattgacca gactattatt gatacattgt tacaattaca acatgatggt catgaactta
     3421 tatttgcatc agcacgtccg attcgtgatt tgttgccagt tttaccatca gtatttcatc
     3481 agcacacatt aattggcgca aatggtgcta tgatttcaca gcaatcaaag atttctgtta
     3541 tcaaaccaat tcatactgat acatatcatc atatcttcaa aataattcaa aagtatgagt
     3601 tagattatat tattgatgat gattggaatt atgctgcaca acttgacgct gagaacgcga
     3661 tttttgagcg tttagatcca cataagctgg ccagttgtat tgatgttgca aatatcgaca
     3721 cgccaatcaa gattatttta ttaaatatag acccggcaca aattacaact atattagacg
     3781 agctagataa ataccatcaa gaattggaaa tgattcacca ttcaaatgag tataacattg
     3841 atataacagc gcaaaatatt aacaaatata ctgcattaca atatatattt gatgcagatg
     3901 ttaaatatat agcatttggt aatgaccaca atgatattgt catgttacaa catgctagta
     3961 gtggctatat tataggacca tcagaagcat acacacacgc aatattgaaa cttgataaaa
     4021 tcaaacacat caataataat gcacaagcta tttgcaaagt cttaaaatca tataaataaa
     4081 aacaccccta tcaaatgata atcattatca atcgataggg gctattttaa taaaattcgt
     4141 cctcgaacat ttcttcctct tcatctaatc caaataattc tgccatttct ccatgttcaa
     4201 ttaacatgtt taaatatgca tcgcggagtt cttcttcact catatcatta atcatttctt
     4261 taagactatc aatccacata tttctgcgta attgatagtc ttcttcaact tcgtttaaca
     4321 tcattatatg tttatttgct gcttctggac tagctgtaaa gagtaatgca atcatatgtt
     4381 tacatatcac tcgtcttcca tcagcatgag gacaattaca tatggatttt ctaggatgtt
     4441 ccatatcaat ataacaacga tatactttgt tgccactgcc ctttacttca gcctcatgct
     4501 gcgtttctga aaatgatttt aagttaatga cgcattcact ttgataataa ttaaagcctc
     4561 tttctataga acgaatactt gcaatatcaa gtaatcccat taatgatact cctttttatt
     4621 attattttta aataaagaaa ataaaataga taagtgtcta gattaaaata cttgatttat
     4681 ctatatttta taacaagtct agaattatcg cattcttaaa taactaatat gaaaatgctt
     4741 gcactaattc ttttgtataa gggtgtctat caacattaaa taattcctct attgcaaaat
     4801 catcgactat catgccatcc ttaagaacga taattctatt aactaagcgt tgtaacacgg
     4861 ataaatcatg agaaataacg ataaaatgat ttaagttcgt aatcgtttgc gcttttaata
     4921 tattgattac attttgttca gctataacat ctaaatttga agttatctca tcacatatta
     4981 aaacgcgagg ctgtgctaat aacgaacgca tgacattaaa tctttgtaat tgtccgccac
     5041 tcacttcgct tggtaattta gtcaataatt gcgcgtttaa ctcaaaagta gataaatgtt
     5101 gtaataataa ttgatcctgt gcagtattat cagttagacc tctgtaataa tataacgctt
     5161 cttttaatga ggtctcaatc gtccaatcag ggttaaagct agttaaaggg tgttggaaaa
     5221 tcggtaacac agcattgtca cttaagtaaa tctctccttt aacaggttta aacaagccaa
     5281 gaaccaatga agcgagcgta cttttaccac agccactttc gcctaaaata ccaacatttt
     5341 ctccatcagg tatagtaata ttgatatctt gtagcaccat ctgcttttta ttataaccaa
     5401 aagtcacatg ttttaactca atcatagtaa tccctcttta attgtgttct atatttaatt
     5461 agacgttcag tatacggatg caaatgctca tacttgaaat gattaatatt acctcgttca
     5521 atgatttgac cttcttttaa aacataaatg tactgacaat atttcaatac atgacttaag
     5581 ttatgtgtga taataaataa tgtttgacca tgttctaata caatatgctg taataaatcc
     5641 atcacttgat taccgttcaa agcatccaat gatgcaactg gttcgtctgc aatgattaat
     5701 ttaggctcca acatgagaac gcttgctatg tatacgcgtt caagttggcc cccagaaagt
     5761 tggaaactat atttatttaa tatatctttg ctttgtaaat taacccacga caaagcctta
     5821 tcaactttgg acaaagcctc ttctttacta cctttataat gcttacgata aatcgcagtt
     5881 aactgtttac ctaatttagt atggtcgtta aaactttctg cataattttg agaaatatag
     5941 ccaattgtat gaccataata ttgactcaat ctactaacat tttccccatc aaattggtac
     6001 gaatcatacg tgcagcttaa atcaaatggt aaatattcaa gtaaagcttt agcaatcaaa
     6061 ctttttccag cgccgctctc tccaatcaag gcattaatct gttgactaaa aattttcaaa
     6121 tcaatccctt taataagaga tttctcacta gtattcttta ttgttaaatt ttgtatatca
     6181 atgagactca tcatattcac cccgttgttt cagcaatcta tctcttagtg catcaccggt
     6241 taaattaaaa attaaaatag ttatagcaat gactgaagca ggtgcaatca acataattgg
     6301 atgagacgaa ataaaatcac gaccttgttg caacatagcg ccccactctg gtgttggcgg
     6361 ttgtgcacct aacccaataa atgatagtga acttatatat agaatgattt taccgaaatc
     6421 aacgaccatc aaaacgataa tagccggtat aattttaggt gttaaatgac gtattaatat
     6481 tgttcttgtt ggtacatgaa ataattgtgc catttttata taaggcttat tcatttcgct
     6541 attaactata cttctagtca accttgtgta attcatccat tttattaatg taattgagat
     6601 aactaaattc cataaagatg gttgaaaaaa acttgctaaa gcaatcatga tgataaattc
     6661 tggaatactt agaccaacat caataaacct taacactaat cgttcaatcc accctttttt
     6721 gtatccggca aatagaccta gtgtaacacc tatgacaacg atagctatta atgttaaaac
     6781 agtaacaaac aatgttgaac gtgcaccgat aataattcgg gtaaataaat ctctcccata
     6841 atcatcagtt cctaataaat gcaaccaact aataggttca aaagtttgtg ataaattgac
     6901 tttggttgca ttttcactac tga
//
LOCUS       DALPQQ010000119         6791 bp    DNA     linear   BCT 22-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus strain K18-6-464
            SAMD00233528-rid16434743.denovo.120, whole genome shotgun sequence.
ACCESSION   DALPQQ010000119 DALPQQ010000000
VERSION     DALPQQ010000119.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMD00233528
            Sequence Read Archive: DRR236061
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 6791)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6791)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001543423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001543423.1
            Genome Coverage       :: 77x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/22/2022 17:09:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,811
            CDSs (total)                      :: 2,743
            Genes (coding)                    :: 2,689
            CDSs (with protein)               :: 2,689
            Genes (RNA)                       :: 68
            rRNAs                             :: 2, 4, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 4, 2 (16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 54
            CDSs (without protein)            :: 54
            Pseudo Genes (ambiguous residues) :: 0 of 54
            Pseudo Genes (frameshifted)       :: 27 of 54
            Pseudo Genes (incomplete)         :: 27 of 54
            Pseudo Genes (internal stop)      :: 10 of 54
            Pseudo Genes (multiple problems)  :: 10 of 54
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6791
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMD00233528-rid16434743.denovo.120"
                     /strain="K18-6-464"
                     /db_xref="taxon:1280"
                     /geo_loc_name="Japan: Niigata"
     gene            47..1030
                     /locus_tag="O7798_002166"
     CDS             47..1030
                     /locus_tag="O7798_002166"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499916.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate ABC transporter substrate-binding
                     protein PstS"
                     /protein_id="HDC2864391.1"
                     /translation="MKKWQFVGTTALGATLLLGACGGGNGGSGNSDLKGEAKGDGSST
                     VAPIVEKLNEKWAQDHSDAKISAGQAGTGAGFQKFIAGDIDFADASRPIKDEEKQKLQ
                     DKNIKYKEFKIAQDGVTVAVNKENDFVDELDKQQLKAIYSGKAKTWKDVNSKWPDKKI
                     NAVSPNSSHGTYDFFENEVMNKEDIKAEKNADTNAIVSSVTKNKEGIGYFGYNFYVQN
                     KDKLKEVKIKDENGKATEPTKKTIQDNSYALSRPLFIYVNEKALKDNKVMSEFIKFVL
                     EDKGKAAEEAGYVAAPEKTYKSQLDDLKAFIDKNQKSDDKKSDDKKSEDKK"
     gene            1221..2147
                     /gene="pstC"
                     /locus_tag="O7798_002167"
     CDS             1221..2147
                     /gene="pstC"
                     /locus_tag="O7798_002167"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499914.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate ABC transporter permease subunit PstC"
                     /protein_id="HDC2864392.1"
                     /translation="MTSSTNVKALIEKNNNKKGKHNDKIIPVILAAISAISILTTLGI
                     LITLLLETITFFTRIPITEFLFSTTWNPTGSDPKFGIWALIIGTLKITVIATIFAVPV
                     GLGAAIYLSEYASDRARRIIKPILEILAGIPTIVFGFFALTFVTPVLRSFIPGLGEFN
                     AISPGLVVGIMIVPLITSLSEDAMASVPNKIREGAYGLGATKLEVATKVVLPAATSGI
                     VASIVLAISRAIGETMIVSLAAGSSPTASLSLTSSIQTMTGYIVEIATGDATFGSNIY
                     YSIYAVGFTLFIFTLIMNLLSQWISKRFREEY"
     gene            2149..3066
                     /gene="pstA"
                     /locus_tag="O7798_002168"
     CDS             2149..3066
                     /gene="pstA"
                     /locus_tag="O7798_002168"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499913.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate ABC transporter permease PstA"
                     /protein_id="HDC2864393.1"
                     /translation="METTDNNRQSLVDQQLVQKHLSSRTVKNKVFKLIFLACTLLGLV
                     VLIALLTQTLIKGVSHLNLQFFTNFSSSTPSMAGVKGALIGSLWLMLSIIPLSIILGI
                     GTAIYLEEYAKNNKFTQFVKISISNLAGVPSVVFGLLGYTLFVGGAGIEALKMGNSIL
                     AAALTMTLLILPIIIVSSQEAIRAVPNSVREASYGLGANKWQTIRRVVLPAALPGILT
                     GFILSLSRALGETAPLVLIGIPTILLATPRSILDQFSALPIQIFTWAKMPQEEFQNVA
                     SAGIIVLLVILILMNGVAIILRNKFSKKF"
     gene            3113..3964
                     /locus_tag="O7798_002169"
     CDS             3113..3964
                     /locus_tag="O7798_002169"
                     /EC_number="7.3.2.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499912.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate ABC transporter ATP-binding protein"
                     /protein_id="HDC2864394.1"
                     /translation="MAQTLAQTKQISQSHTFDVSQSHHKTPDDTNSHSVIYSTQNLDL
                     WYGENHALQNINLDIYENQITAIIGPSGCGKSTYIKTLNRMVELVPSVKTAGKILYRD
                     QDIFDQKYSKEQLRTNVGMVFQQPNPFPKSIYDNITYGPKIHGIKNKKVLDEIVEKSL
                     RGAAIWDELKDRLHTNAYSLSGGQQQRVCIARCLAIEPEVILMDEPTSALDPISTLRV
                     EELVQELKEKYTIIMVTHNMQQAARVSDKTAFFLNGYVNEYDDTDKIFSNPSNKKTED
                     YISGRFG"
     gene            3971..4612
                     /gene="phoU"
                     /locus_tag="O7798_002170"
     CDS             3971..4612
                     /gene="phoU"
                     /locus_tag="O7798_002170"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499911.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate signaling complex protein PhoU"
                     /protein_id="HDC2864395.1"
                     /translation="MAIIRQRYQEQLDDLIKELRRLGANVYVSIENGIKSLSIDDRGF
                     ARQTVKNDKHINQLNYDINERVIMLITKQQPIASDLRMMISSLKIASDLERIGDNASS
                     IANIRLRTKITDDYVLTRLKTMGKLAMLMLKDLDQAFKKKDTVLIREIIERDEDIDDL
                     YSHIINATYLIDNDPFVAAQAHLAARHLERIGDHIINIAESVYFYLTGTHYEQ"
     gene            complement(4752..6566)
                     /gene="pepF"
                     /locus_tag="O7798_002171"
     CDS             complement(4752..6566)
                     /gene="pepF"
                     /locus_tag="O7798_002171"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499910.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="oligoendopeptidase F"
                     /protein_id="HDC2864396.1"
                     /translation="MSQGLPLREDVPVSETWDLVDLFKDDQQYYESIDALVQQANQFH
                     HTYATTLNSIEQINTALAELENILIALDRLSNYAELRLSVDTSNIEAQVLSAKLSTTY
                     GKIVSQLSFVESEILELPEEILQQLEESCPYQHYIKQLIKQKPFQLSASVEQVLATLS
                     PTLNSPYDLYGTTKMLDITFDSFEHDGTTYPVDYATFENDYEDNKDPEFRRKSFKSFS
                     DGIRKYQHTTAATYNMQVQQEKIEADLRGFESVIDYLLHSQEVTRDMFDRQIDMIMRD
                     LAPVMQKYAKLLQRIHGLDNMRFEDLKISVDPDYEPEISIEDSKNYIFGALSVLGDDY
                     TNMLREAYDQRWIDFAQNKGKDTGAFCASPYFTHSYVFISWTGKMAEAFVLAHELGHA
                     GHFTLAQKHQPYLESEASMYFVEAPSTMNEMLMANYLFNTSDNPRFKRWVIGSILSRT
                     YYHNMVTHLLEAAYQREVYHKVDQGESLNAPTLNEIMLNVYKQFFGDAVDMTEGAELT
                     WMRQPHYYMGLYSYTYSAGLTIGTVVSQKIKNEGQPAVDAWLETLKKGGSVSPVELAN
                     IAGVDITTEQPLKSTIQYISDLVDEVEKLTDEIEQANN"
BASE COUNT         2370 a         1070 c         1161 g         2190 t
ORIGIN      
        1 aatcaataca aatactattt gttgttcata cagggaggat atttcaatga aaaaatggca
       61 atttgttggt actacagctt taggtgcaac actattatta ggtgcttgtg gtggcggtaa
      121 tggtggcagt ggtaatagtg atttaaaagg ggaagctaaa ggtgatggct catcaacagt
      181 agcaccaatt gtggagaaat taaatgaaaa atgggctcaa gatcactcgg atgctaaaat
      241 ctcagcagga caagctggta caggtgctgg tttccaaaaa ttcattgcag gagatatcga
      301 cttcgctgat gcttctagac caattaaaga tgaagagaag caaaaattac aagataagaa
      361 tatcaaatac aaagaattca aaattgcgca agatggtgta acggttgctg taaataaaga
      421 aaatgatttt gtagatgaat tagacaaaca gcaattaaaa gcaatttatt ctggaaaagc
      481 taaaacatgg aaagatgtta atagtaaatg gccagataaa aaaataaatg ctgtatcacc
      541 aaactcaagt catggtactt atgacttctt tgaaaatgaa gtaatgaata aagaagatat
      601 taaagcagaa aaaaatgctg atacaaatgc tatcgtttct tctgtaacga aaaacaaaga
      661 gggaatcgga tactttggat ataacttcta cgtacaaaat aaagataaat taaaagaagt
      721 taaaatcaaa gatgaaaatg gtaaagcaac agagcctacg aaaaaaacaa ttcaagataa
      781 ctcttatgca ttaagtagac cattattcat ttatgtaaat gaaaaagcat tgaaagataa
      841 taaagtaatg tcagaattta tcaaattcgt cttagaagat aaaggtaaag cagctgaaga
      901 agctggatat gtagcagcac cagagaaaac atacaaatca caattagatg atttaaaagc
      961 atttattgat aaaaatcaaa aatcagacga caagaaatct gatgataaaa agtctgaaga
     1021 caaaaaataa taagacgcaa tttcaaatgt gtcttgaaac atgattttga tggtgaatca
     1081 ttatttagag tacaaagctt gatttatcga gacgctgatt ttgacattca gttagtctac
     1141 aagcttatca acttaaaata gtggttcatc attattttac aaatctaatt attttgggag
     1201 taatagaaag aggtttgatt atgacttcat ctactaatgt taaagcttta atcgaaaaaa
     1261 ataataataa aaaaggaaag cataatgaca aaattatacc agttatttta gccgcaattt
     1321 cagcgatttc cattttaaca acactaggta tattaatcac attgctttta gaaaccatca
     1381 cttttttcac cagaattcca ataactgaat ttctattttc tactacttgg aatcctaccg
     1441 gttcagaccc taagtttggt atctgggcat tgataatagg gactttaaaa atcacagtta
     1501 ttgcgactat atttgcagtt ccagtcgggc ttggtgcagc aatttattta agtgaatatg
     1561 caagtgaccg tgcacgacgc ataattaaac cgatattaga aattttagca ggaataccaa
     1621 caattgtgtt tggtttcttt gcattaacct ttgttacacc agtattaaga tctttcatac
     1681 caggtcttgg agagtttaat gctataagtc ccggcttagt tgtcggtatt atgattgtcc
     1741 ctctcatcac aagtttgagt gaggatgcaa tggcatctgt accaaataaa attcgagaag
     1801 gtgcctatgg acttggagca actaaattag aagtagcaac taaagtcgta cttcccgcag
     1861 caacatcagg tattgtagct tcaatcgttc tcgcgatttc aagagcaatt ggagaaacga
     1921 tgattgtatc attagcggca ggtagttcgc caacagcttc attaagttta acaagttcga
     1981 ttcaaacaat gactggatat attgttgaga tagcgacagg tgatgcaaca tttggatcaa
     2041 atatttatta cagtatttat gctgtagggt tcacactatt tatctttacc ttaatcatga
     2101 atttactttc tcagtggatt tctaagcgtt ttagggagga gtattaatat ggaaacgaca
     2161 gataataata gacaatcact cgtcgatcaa caacttgtcc aaaaacattt atcatccaga
     2221 acggttaaaa ataaagtgtt caaactcata tttttagcat gtacattatt aggacttgtc
     2281 gtacttattg cgttgttaac tcaaacattg attaaagggg taagtcattt aaatttacag
     2341 tttttcacta atttttcttc ttcaacacca tctatggctg gcgttaaagg cgcgttaatc
     2401 ggttcacttt ggttaatgtt aagtatcatt ccattatcaa tcatcctagg aataggtaca
     2461 gctatatact tagaagaata tgcgaaaaac aacaaattta ctcagtttgt taaaatcagt
     2521 atttccaatt tagctggtgt accatcagtt gtatttgggt tattaggtta tactttgttc
     2581 gttggtggtg cagggattga agccttgaaa atgggtaaca gtatattggc agcagcgcta
     2641 acaatgacct tactgatatt accaattatt attgtttcaa gtcaggaagc aattagagct
     2701 gtacctaact cagtacgcga agcttcttac ggcttaggtg ctaataaatg gcaaacgata
     2761 agacgtgttg tcttaccagc agcgttacct ggtattttaa ctggattcat tttgtctctt
     2821 tcaagagcac tgggagaaac agcgccactt gtgctaatcg gtataccgac tatattattg
     2881 gcaacaccta gaagtatatt ggatcaattt tcagcattac ctatccaaat atttacttgg
     2941 gcgaaaatgc ctcaagaaga attccagaat gttgcatcgg caggcattat cgttttacta
     3001 gttatcttaa tcttaatgaa tggcgttgcg attattttac gtaacaaatt tagtaaaaaa
     3061 ttctaattta aacaatcaat ctcatttatc tattaaaaag ggagttttaa atatggcgca
     3121 aacacttgca caaactaaac aaatatctca aagtcatacg tttgatgtct cacaaagtca
     3181 tcataaaaca ccagatgata caaactcaca ttctgttata tattcaacac aaaatttaga
     3241 cttatggtat ggcgaaaatc atgcattaca aaatattaat ttagatattt atgaaaacca
     3301 aattactgcc attataggtc catctggttg tggcaaatca acatatatta aaactttgaa
     3361 tcgaatggtt gagttagtac cttctgtgaa aacagctggt aaaatattat atcgagatca
     3421 agacattttt gatcaaaaat attctaaaga acaattacgt acaaatgtgg gcatggtctt
     3481 tcaacaacct aatccatttc caaaatcaat atacgataat attacttacg gtccaaagat
     3541 tcacggtatt aaaaataaaa aagttcttga tgaaatcgtt gagaaatcat tacgtggcgc
     3601 tgcaatttgg gatgaattaa aggataggtt gcacacaaat gcatatagtt tatccggtgg
     3661 gcaacaacaa cgtgtttgta tcgcgcgttg tttagcaatt gaacctgaag tcattttaat
     3721 ggatgaaccg acatcagcat tagatccaat ctcaacatta agagtagaag agttggttca
     3781 agaactaaaa gaaaagtata caattattat ggttacacat aatatgcaac aagcagctcg
     3841 tgtatcagat aaaactgcat ttttcttaaa tggttatgtc aatgaatatg atgatactga
     3901 taaaattttc tctaacccat caaacaagaa aacagaagat tatatttcag gaaggtttgg
     3961 ttgatatata atggcaataa ttagacaacg atatcaggag caacttgatg atttaataaa
     4021 agaattacgt cggttaggtg caaatgtcta tgtgagtatt gaaaatggta taaaatcatt
     4081 aagtattgac gatagaggct ttgcacgaca aacagttaaa aacgataaac atatcaatca
     4141 attaaattat gatattaatg agcgagttat catgttaatt acaaagcaac agcccattgc
     4201 gagtgatttg cgtatgatga tttcttcatt aaaaatcgcc tccgatttag aaagaatagg
     4261 agataatgcc tcgagtattg ccaatattcg attgcgtaca aagattacag atgattatgt
     4321 gttaacccgt ttaaagacaa tgggtaaatt agctatgtta atgttaaagg acttagatca
     4381 agcatttaaa aagaaagata ccgtattaat aagagaaata attgagcgtg atgaagatat
     4441 cgatgactta tatagtcata ttattaacgc aacgtatctt attgataacg atccatttgt
     4501 cgctgcacaa gctcatttag cagcaagaca tttagaacgt attggtgatc atattattaa
     4561 catcgctgaa agtgtttatt tttatttaac aggtacacat tacgaacaat aacttaaagt
     4621 tattactata aaatccctta cgataaatat atatttctat tattcataaa ccctcaaaaa
     4681 aaccaagatt ctcacaatta gtaatgtgaa aatcttggtt tatattgttc tactataaat
     4741 tgtctcgcac cttagttatt tgcttgctca atttcatctg ttaatttttc aacttcatcg
     4801 actaaatcag aaatatattg aattgtagat ttaagtggct gttctgtagt aatgtctaca
     4861 cctgcaatgt ttgcaagttc gacaggtgat acactaccac cttttttcaa tgtttctaac
     4921 caagcatcaa cagctggttg gccttcattt ttaatctttt gagaaacgac agttccgatt
     4981 gttaagccag cagaatacgt atacgaatat aatcccatat agtaatgagg ttgacgcatc
     5041 catgttaatt cagcaccctc agtcatgtct actgcatctc caaaaaattg tttataaaca
     5101 tttagcatta tttcatttaa tgtcggcgca tttaaagatt caccttgatc tactttgtga
     5161 tacacttcac gttgataagc agcttctaat aaatgggtaa ccatattatg ataatatgtt
     5221 ctagataaaa ttgagccaat aacccaacgc ttaaatcttg gattatcact tgtgttaaat
     5281 aaataattgg ccatcaacat ttcattcatt gtagaagggg cttcaacaaa gtacattgat
     5341 gcttctgatt caagatatgg ttgatgtttt tgagctaatg taaaatgacc tgcatgacct
     5401 aattcatgtg ctaagacaaa tgcttcagcc attttaccag tccaagaaat aaacacatat
     5461 gaatgtgtaa agtatggact tgcacaaaat gcgcctgtat ctttaccttt attttgtgca
     5521 aaatcaatcc atcgctgatc gtatgcttca cgtaacatgt ttgtatagtc atcacctaaa
     5581 acacttaacg caccgaaaat ataatttttt gagtcttcaa ttgaaatctc tggttcataa
     5641 tcagggtcta cagaaatctt caagtcttca aaacgcatgt tatctaatcc gtgaatacgt
     5701 tgtaaaagtt tagcatattt ctgcataact ggtgccaagt cacgcataat catatcgatt
     5761 tgacggtcaa acatatcacg cgttacttct tgactatgta ataaataatc gatgactgat
     5821 tcaaatccac gtaaatcagc ttcaattttt tcttgttgta cttgcatatt atatgtagcc
     5881 gcggtagtat gctgatattt tcgaatccca tcgctaaacg atttgaaact tttacgtcta
     5941 aactcaggat ctttattatc ttcataatca ttttcaaacg tagcatagtc gacagggtac
     6001 gttgtaccat catgttcaaa tgaatcgaat gtaatatcta gcatttttgt cgtgccgtat
     6061 aaatcgtaag gactgtttag cgtaggtgat aaagttgcta atacttgttc taccgacgca
     6121 gataattgga atggcttttg ttttattaac tgtttaatat agtgttgata tggacatgat
     6181 tcttctaatt gttgaagtat ttcttctggt aattcaagta tttctgactc tacaaatgat
     6241 aattggctaa caattttacc gtatgtagta gataatttag cgctcaatac ttgtgcctcg
     6301 atattactag tatctacact taaacgtagt tctgcataat tacttaagcg atctaaggca
     6361 attaaaatat tttctaattc agctaaagca gtattaattt gttcgattga atttaatgtt
     6421 gttgcatatg tatgatgaaa ttgatttgct tgttgtacta gagcgtcaat actttcataa
     6481 tattgttgat catctttaaa taagtctact aaatcccatg tttctgaaac aggaacatct
     6541 tctcttaaag gtaaaccttg agacatataa tcactccttt ggtataatac attcattata
     6601 cataattttg tctcctaaac gataatgtta cgatttccat gtcgcaagga acaatgattt
     6661 ttctattagt agatagaata ttgcttgaaa ctgactgcta ttgtttaagt ttttaaaaat
     6721 ttataataaa atgtatacaa ggaaagtaat gaaataaaag gagaatgaat atgacattat
     6781 tcgatatgcc t
//
LOCUS       DALPQQ010000120         6707 bp    DNA     linear   BCT 22-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus strain K18-6-464
            SAMD00233528-rid16434743.denovo.121, whole genome shotgun sequence.
ACCESSION   DALPQQ010000120 DALPQQ010000000
VERSION     DALPQQ010000120.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMD00233528
            Sequence Read Archive: DRR236061
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 6707)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6707)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001543423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001543423.1
            Genome Coverage       :: 77x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/22/2022 17:09:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,811
            CDSs (total)                      :: 2,743
            Genes (coding)                    :: 2,689
            CDSs (with protein)               :: 2,689
            Genes (RNA)                       :: 68
            rRNAs                             :: 2, 4, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 4, 2 (16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 54
            CDSs (without protein)            :: 54
            Pseudo Genes (ambiguous residues) :: 0 of 54
            Pseudo Genes (frameshifted)       :: 27 of 54
            Pseudo Genes (incomplete)         :: 27 of 54
            Pseudo Genes (internal stop)      :: 10 of 54
            Pseudo Genes (multiple problems)  :: 10 of 54
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6707
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMD00233528-rid16434743.denovo.121"
                     /strain="K18-6-464"
                     /db_xref="taxon:1280"
                     /geo_loc_name="Japan: Niigata"
     gene            160..1389
                     /locus_tag="O7798_002172"
     CDS             160..1389
                     /locus_tag="O7798_002172"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500315.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent malic enzyme"
                     /protein_id="HDC2864397.1"
                     /translation="MSLRDEALEMHKRNQGKLEVKPNVKVTNKEELSLAYSPGVAEPC
                     KDIYEDKRKVYDYTIKGNTVAVITDGTAVLGLGNIGPEASIPVMEGKAVLFKSFAGIN
                     GVPIALNTTDTEEIIKTVKLLEPNYGGINLEDISAPRCFEIEERLKKETNIPVFHDDQ
                     HGTAIVTLAGLVNALRVVNKDIAKIKVVLNGAGAAGIAIVKLLYAYGVRNMVMCDSRG
                     AIFEGRSYGMNPTKDVVAKWTNKDKIEGSLEEVVKDADVFIGVSVANALSQDMVKSMA
                     DNPIIFAMANPNPEIIPDDAKAAGARVVGTGRSDYPNQINNVLAFPGIFRGALEVEAT
                     HINEEMKKAAVEAIADLIDSSELNEDYCIPGPFDKRVAPSVARNVAKAAMESGVARIE
                     VDPQDVYDKTMKLTDLQ"
     gene            1584..2441
                     /locus_tag="O7798_002173"
     CDS             1584..2441
                     /locus_tag="O7798_002173"
                     /EC_number="6.4.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500314.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA carboxylase carboxyltransferase
                     subunit beta"
                     /protein_id="HDC2864398.1"
                     /translation="MFKDFFNRTKKKKYLTVQDSKNNDVPAGIMTKCPKCKKIMYTKE
                     LAENLNVCFNCDHHIALTAYKRIEAISDEGSFTEFDKGMTSANPLDFPSYLEKIEKDQ
                     QKTGLKEAVVTGTAQLDGMKFGVAVMDSRFRMGSMGSVIGEKICRIIDYCTENRLPFI
                     LFSASGGARMQEGIISLMQMGKTSVSLKRHSDAGLLYISYLTHPTTGGVSASFASVGD
                     INLSEPKALIGFAGRRVIEQTINEKLPDDFQTAEFLLEHGQLDKVVHRNDMRQTLSEI
                     LKIHQEVTK"
     gene            2441..3385
                     /locus_tag="O7798_002174"
     CDS             2441..3385
                     /locus_tag="O7798_002174"
                     /EC_number="6.4.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500313.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA carboxylase carboxyltransferase
                     subunit alpha"
                     /protein_id="HDC2864399.1"
                     /translation="MLDFEKPLFEIRNKIESLKESQDKNDVDLQEEIDMLEASLERET
                     KKIYTNLKPWDRVQIARLQERPTTLDYIPYIFDSFMELHGDRNFRDDPAMIGGIGFLN
                     GRAVTVIGQQRGKDTKDNIYRNFGMAHPEGYRKALRLMKQAEKFNRPIFTFIDTKGAY
                     PGKAAEERGQSESIATNLIEMASLKVPVIAIVIGEGGSGGALGIGIANKVLMLENSTY
                     SVISPEGAAALLWKDSNLAKIAAETMKITAHDIKQLGIIDDVISEPLGGAHKDIEQQA
                     LAIKSAFVAQLDSLESLSRDEIANDRFEKFRNIGSYIE"
     gene            3654..4622
                     /gene="pfkA"
                     /locus_tag="O7798_002175"
     CDS             3654..4622
                     /gene="pfkA"
                     /locus_tag="O7798_002175"
                     /EC_number="2.7.1.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002462395.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="6-phosphofructokinase"
                     /protein_id="HDC2864400.1"
                     /translation="MKKIAVLTSGGDSPGMNAAVRAVVRTAIYNEIEVYGVYHGYQGL
                     LNDDIHKLELGSVGDTIQRGGTFLYSARCPEFKEQEVRKVAIENLRKRGIEGLVVIGG
                     DGSYRGAQRISEECKEIQTIGIPGTIDNDINGTDFTIGFDTALNTIIGLVDKIRDTAS
                     SHARTFIIEAMGRDCGDLALWAGLSVGAETIVVPEVKTDIKEIADKIEQGIKRGKKHS
                     IVLVAEGCMTAQDCQKELSQYINVDNRVSVLGHVQRGGSPTGADRVLASRLGGYAVDL
                     LMQGETAKGVGIKNNKIVATSFDEIFDGKDHKFDYSLYELANKLSI"
     gene            4644..6401
                     /gene="pyk"
                     /locus_tag="O7798_002176"
     CDS             4644..6401
                     /gene="pyk"
                     /locus_tag="O7798_002176"
                     /EC_number="2.7.1.40"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500311.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyruvate kinase"
                     /protein_id="HDC2864401.1"
                     /translation="MRKTKIVCTIGPASESEEMIEKLINAGMNVARLNFSHGSHEEHK
                     GRIDTIRKVAKRLDKIVAILLDTKGPEIRTHNMKDGIIELERGNEVIVSMNEVEGTPE
                     KFSVTYENLINDVQVGSYILLDDGLIELQVKDIDHAKKEVKCDILNSGELKNKKGVNL
                     PGVRVSLPGITEKDAEDIRFGIKENVDFIAASFVRRPSDVLEIREILEEQKANISVFP
                     KIENQEGIDNIAEILEVSDGLMVARGDMGVEIPPEKVPMVQKDLIRQCNKLGKPVITA
                     TQMLDSMQRNPRATRAEASDVANAIYDGTDAVMLSGETAAGLYPEEAVKTMRNIAVSA
                     EAAQDYKKLLSDRTKLVETSLVNAIGISVAHTALNLNVKAIVAATESGSTARTISKYR
                     PHSDIIAVTPSEETARQCSIVWGVQPVVKKGRKSTDALLNNAVATAVETGRVSNGDLI
                     IITAGVPTGETGTTNMMKIHLVGDEIANGQGIGRGSVVGTTLVAETVKDLEGKDLSDK
                     VIVTNSIDETFVPYVEKALGLITEENGITSPSAIVGLEKGIPTVVGVEKAVKNISNNM
                     LVTIDAAQGKIFEGYANVL"
BASE COUNT         2376 a          898 c         1361 g         2072 t
ORIGIN      
        1 taaatattat tttattatcg tttatcgcta tttgtgttac ataatcaaaa ccataaattc
       61 ttactcattc agatttaccc aatattttta cttttataat gtaatgcgtt ttatccaagt
      121 tattttttaa aaataaatat tgaattaggg gctgatttca tgtcattaag agatgaagca
      181 ttggaaatgc acaaacgtaa tcaaggtaaa ttagaagtta aaccaaatgt aaaagttact
      241 aataaagagg aattaagttt agcatactca cctggcgttg ctgaaccgtg taaagatatt
      301 tatgaagata aaagaaaagt atatgattac acaattaaag gaaatacagt tgcagttatt
      361 actgatggaa cagcggtatt aggtttaggt aacattggac ctgaagcaag tattcctgta
      421 atggaaggta aagcagtatt attcaaaagc ttcgctggta tcaatggggt gcctattgcg
      481 ttaaatacaa ctgataccga agaaatcatt aaaacagtta agttgttaga acctaattat
      541 ggtggtatta atttagagga tatttcggca ccacgttgtt ttgaaattga agaacgattg
      601 aaaaaagaaa ctaatattcc ggtattccat gacgatcaac atggtacagc aattgtaaca
      661 ttggcaggtt tggtaaatgc attgagagtt gttaacaaag atattgctaa aataaaagtt
      721 gtactaaatg gtgctggtgc agcaggaata gccattgtta aattactata cgcgtatggt
      781 gtaagaaata tggttatgtg tgactcaaga ggcgcaattt ttgaaggacg ttcatatggt
      841 atgaatccta cgaaagatgt tgtagcaaaa tggacaaata aagataagat tgaagggtct
      901 ttagaagaag tcgtaaaaga cgcagatgta tttatcgggg tttctgtagc taatgcgctg
      961 tcacaagata tggttaagag tatggcagat aatccaatta tatttgcaat ggctaatcca
     1021 aatcctgaaa taatacctga tgatgccaaa gcggcaggtg cacgagttgt tggtacagga
     1081 cgttcagact atcctaacca aattaataat gtattagctt tccctggtat ttttagaggt
     1141 gcattagagg ttgaagctac acatataaat gaagaaatga aaaaggcagc tgtagaagcg
     1201 attgctgatt taatcgatag ttctgaatta aatgaagact actgtatccc aggaccgttt
     1261 gataaacgtg tagcgccatc agttgctcgt aatgttgcta aagcggcaat ggaatctgga
     1321 gtagctagga ttgaagttga tccgcaagat gtgtatgata aaacaatgaa acttacagat
     1381 ttacaataaa aataattaac gtttaattaa attgcttaaa agttagcaat aaagagtcat
     1441 taaaatgatg aaaatgaaag tttatgataa acattcaaca gtcaaacgaa tataaatcaa
     1501 ataaatttaa acccgttttt aactggtcaa gttcagttta aggctctaaa tggttagaac
     1561 agaggttatt tggaggtttt cctatgttta aagatttttt taatcgaaca aagaaaaaga
     1621 aatatcttac agtacaagac tctaaaaata atgatgtgcc tgcaggtatt atgactaagt
     1681 gtccaaagtg taagaaaatt atgtacacaa aagaattagc tgaaaattta aatgtgtgct
     1741 ttaattgtga tcatcatatt gctttaactg cgtataaacg tatagaagca atttctgatg
     1801 aaggatcatt tacagaattc gataagggaa tgacctctgc gaatccatta gattttccaa
     1861 gttatttaga aaaaattgaa aaggaccaac aaaagacagg tcttaaagaa gcagttgtga
     1921 ctggtacagc acaactagat ggtatgaaat ttggcgttgc tgtcatggat tcacgtttta
     1981 gaatgggaag tatgggatcg gttatcggtg aaaagatatg tcgcatcatt gattactgca
     2041 ctgagaaccg tttaccattt attcttttct ctgcaagtgg tggtgcacgt atgcaagaag
     2101 gtattatttc cttgatgcaa atgggtaaaa ccagtgtatc tttaaaacgt cattctgacg
     2161 ctggactatt atatatatca tatttaacac atccaactac tggtggtgta tctgcaagtt
     2221 ttgcatcagt tggtgatata aatttaagtg agccaaaagc gttgataggt tttgcaggtc
     2281 gtcgagttat tgaacagaca ataaacgaaa aattgccaga tgatttccaa actgcagaat
     2341 ttttattaga gcatggacaa ttggataaag ttgtacatcg taatgatatg cgtcaaacat
     2401 tgtctgaaat tctaaaaatc catcaagagg tgactaaata atgttagatt ttgaaaaacc
     2461 actttttgaa attcgaaata aaattgaatc tttaaaagaa tctcaagata aaaatgatgt
     2521 ggatttacaa gaagaaattg acatgcttga agcgtcattg gaacgagaaa ctaaaaaaat
     2581 atatacaaat ctaaaaccat gggatcgtgt gcaaattgcg cgtttgcaag aaagacctac
     2641 gaccctagat tatattccat atatctttga ttcgtttatg gaactacatg gtgatcgtaa
     2701 ttttagagat gatccagcaa tgattggtgg tattggcttt ttaaatggtc gtgctgttac
     2761 agttattgga caacaacgtg gaaaagatac aaaagataat atttatcgaa attttggtat
     2821 ggcgcatcca gaaggttatc gaaaagcatt acgtttaatg aaacaagctg aaaaattcaa
     2881 tcgtcctatc tttacattta tagatacaaa aggtgcatat cctggtaaag ctgctgaaga
     2941 acgtggacaa agtgaatcta tcgcaacaaa tttgattgag atggcttcat taaaagtacc
     3001 agttattgcg attgtcattg gtgaaggtgg cagtggaggt gctctaggta ttggtattgc
     3061 caataaagta ttgatgttag agaatagtac ttactctgtt atatctcctg aaggtgcagc
     3121 ggcattatta tggaaagaca gtaatttggc taaaattgca gctgaaacaa tgaaaattac
     3181 tgcccatgat attaagcaat taggtattat agatgatgtc atttctgaac cacttggcgg
     3241 tgcacataaa gatattgaac agcaagcttt agctattaaa tcagcgtttg ttgcacagtt
     3301 agattcactt gagtcattat cacgtgatga aattgctaat gatcgctttg aaaaattcag
     3361 aaatatcggt tcttatatag aataatcaac ttgagcattt ttatgttaaa tcgatactgg
     3421 gttttaccat aaattgaagt acattaaaac aataatttaa tatttagata ctgaatttta
     3481 actaagatta gtagtcaaaa ttgtggctac taatcttttt ttaattaagt taaaataaaa
     3541 ttcaatattt aaaacgttta catcaattca atacattagt tttgatggaa tgacatatca
     3601 atttgtggta atttagagtt aaagataaat cagttataga aaggtatgtc gtcatgaaga
     3661 aaattgcagt tttaactagt ggtggagatt cacctggaat gaatgctgcc gtaagagcag
     3721 ttgttcgtac agcaatttac aatgaaattg aagtttatgg tgtgtatcat ggttaccaag
     3781 gattgttaaa tgatgatatt cataaacttg aattaggatc agttggggat acgattcagc
     3841 gtggaggtac attcttgtat tcagcaagat gtccagagtt taaggagcaa gaagtacgta
     3901 aagttgcaat cgaaaactta cgtaaaagag ggattgaggg ccttgtagtt attggtggtg
     3961 acggtagtta tcgcggtgca caacgcatca gtgaggaatg taaagaaatt caaactatcg
     4021 gtattcctgg tacgattgac aatgatatca atggtactga ttttacaatt ggatttgaca
     4081 cagcattaaa tacgattatt ggcttagtcg acaaaattag agatactgcg tcaagtcacg
     4141 cacgaacatt tatcattgaa gcaatgggcc gtgattgtgg agatctagca ttatgggctg
     4201 gattatcagt tggtgctgag acaattgtag ttccagaagt gaaaacagat attaaagaaa
     4261 tagctgataa aattgaacaa ggtattaaac gtggtaagaa acactcaatc gttcttgtag
     4321 cagaaggttg tatgactgcg caagattgtc aaaaagaatt atcacaatac atcaatgttg
     4381 ataatagagt gtctgtgtta ggtcacgttc aacgtggtgg tagcccaaca ggtgcggata
     4441 gagttttagc atcacgttta ggtggatatg cggtagactt attaatgcaa ggtgaaacag
     4501 ctaagggtgt tggaattaag aacaataaaa ttgtagcaac atcttttgat gaaatttttg
     4561 atggtaaaga tcataaattt gattatagtc tatatgaact tgctaacaag ttatctatat
     4621 aagatttcag gaggaattat aaaatgagaa aaactaaaat tgtatgtaca attggaccag
     4681 cttcagaatc agaagaaatg attgagaaat taatcaatgc tggtatgaac gttgcacgat
     4741 taaacttttc acatggtagt catgaagagc ataaaggtag aattgataca attcgtaaag
     4801 tagctaaaag attagacaaa attgtagcaa ttttattaga tacaaaaggt ccagaaattc
     4861 gtacgcataa tatgaaagac ggtatcattg aacttgaacg tggcaacgaa gttattgtta
     4921 gcatgaatga agttgaagga acacctgaaa agttctcagt aacatatgaa aacttaatta
     4981 acgatgttca agtaggttca tacattttac ttgatgatgg cttaattgaa ttacaagtta
     5041 aagatattga ccatgctaaa aaagaagtta aatgtgatat tttaaactct ggtgagctta
     5101 aaaacaaaaa aggtgttaac ttacctggcg taagagtaag tttacctggt attacagaaa
     5161 aagatgctga agatatccgt ttcggtatta aagaaaatgt tgacttcatt gcagcaagtt
     5221 tcgtacgtcg tcctagtgat gttttagaaa ttcgtgaaat tttagaagaa caaaaagcta
     5281 acatttcagt attccctaaa attgaaaacc aagaaggtat tgataatatt gcggaaattc
     5341 ttgaagtgtc tgatggttta atggttgcac gtggtgacat gggtgttgaa attccacctg
     5401 aaaaagtacc aatggttcaa aaagatttaa tcagacaatg taacaaatta ggtaaaccag
     5461 ttattacagc tacacaaatg ttagattcta tgcaacgtaa cccacgtgct acacgtgcag
     5521 aagctagtga cgttgccaac gcaatctatg atggtacaga tgcagtaatg ttatctggtg
     5581 aaactgctgc tggtttatat cctgaagaag ctgttaaaac aatgagaaat attgctgtat
     5641 cagctgaagc agcccaagat tacaaaaagt tattgtcaga tcgtactaaa ttagttgaaa
     5701 cttcattagt gaatgctatc ggtatttcgg ttgcacatac agctttaaac ttaaatgtta
     5761 aagcaattgt agctgctact gaaagtggtt caacggcacg tactatctcc aaatatcgtc
     5821 cacattcaga cattattgcg gtgactccaa gtgaagaaac tgcacgtcaa tgttcaattg
     5881 tttggggagt tcaacctgta gttaaaaaag gacgtaagag tacagatgca ttgttaaaca
     5941 atgcagttgc aacagctgtt gaaactggta gagtatctaa tggtgattta atcattatta
     6001 ctgctggtgt accaactggt gaaactggaa ctactaatat gatgaaaatc cacctagttg
     6061 gtgacgaaat tgctaatggt caaggtattg gacgtggatc agttgttggt actacgttag
     6121 ttgctgaaac tgttaaagat ttagaaggta aagatttatc tgacaaagtt atcgttacta
     6181 actcaatcga tgaaacgttt gtaccttatg tagaaaaagc tttaggctta attacagaag
     6241 aaaatggtat tacatcacca agtgcaattg ttggtttaga aaaaggtatt ccaacagttg
     6301 taggtgtaga aaaagctgtt aaaaacataa gcaataacat gttagttacg attgatgctg
     6361 ctcaaggtaa aatctttgaa ggatatgcaa acgtactata atttataaaa aaacgtcttt
     6421 ccatttatca acaatggaaa ggcgtttttt ggttcatctg gtattttatg acgtaattaa
     6481 taggttattt gataatgata gtgtatgaat ggcaatctat ataaatgttt atatctttta
     6541 tacatgtaca ttatcacctt caaactttca ctcatattac tttggaaatt tattataaaa
     6601 tagaagtatg gatgtatttc tgaaatgata cattattaaa tagatgagaa agtaaaagtt
     6661 ttgagccaag tacgcaattt aatattataa gttgcatata aaacagg
//
LOCUS       DALPQQ010000121         6667 bp    DNA     linear   BCT 22-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus strain K18-6-464
            SAMD00233528-rid16434743.denovo.122, whole genome shotgun sequence.
ACCESSION   DALPQQ010000121 DALPQQ010000000
VERSION     DALPQQ010000121.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMD00233528
            Sequence Read Archive: DRR236061
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 6667)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6667)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001543423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001543423.1
            Genome Coverage       :: 77x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/22/2022 17:09:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,811
            CDSs (total)                      :: 2,743
            Genes (coding)                    :: 2,689
            CDSs (with protein)               :: 2,689
            Genes (RNA)                       :: 68
            rRNAs                             :: 2, 4, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 4, 2 (16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 54
            CDSs (without protein)            :: 54
            Pseudo Genes (ambiguous residues) :: 0 of 54
            Pseudo Genes (frameshifted)       :: 27 of 54
            Pseudo Genes (incomplete)         :: 27 of 54
            Pseudo Genes (internal stop)      :: 10 of 54
            Pseudo Genes (multiple problems)  :: 10 of 54
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6667
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMD00233528-rid16434743.denovo.122"
                     /strain="K18-6-464"
                     /db_xref="taxon:1280"
                     /geo_loc_name="Japan: Niigata"
     gene            61..1050
                     /gene="trpS"
                     /locus_tag="O7798_002177"
     CDS             61..1050
                     /gene="trpS"
                     /locus_tag="O7798_002177"
                     /EC_number="6.1.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499486.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tryptophan--tRNA ligase"
                     /protein_id="HDC2864402.1"
                     /translation="METLFSGIQPSGIPTIGNYIGALKQFVDVQNDYDCYFCIVDQHA
                     ITMPQDRLKLRKQTRQLAAIYLASGIDPDKATLFIQSEVPAHVQAGWMLTTIASVGEL
                     ERMTQYKDKAQKAVEGIPAGLLTYPPLMAADIVLYNTNIVPVGDDQKQHIELTRNLVD
                     RFNSRYNDVLVKPEIRMPKVGGRVMSLQDPTRKMSKSDDNAKNFISLLDEPNVAAKKI
                     KSAVTDSDGIIKFDRDNKPGITNLISIYAGLTDMPIKDIEAKYEGEGYGKFKGDLAEI
                     VKAFLVEFQEKYESFYNSDKLDDILDQGRDKAHKVSFKTVKKMEKAMGLGRKR"
     gene            complement(1092..1973)
                     /locus_tag="O7798_002178"
     CDS             complement(1092..1973)
                     /locus_tag="O7798_002178"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499485.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HDC2864403.1"
                     /translation="MQNKSKSPFKIAFSKFIHNKIAMLSVIFLLIITIVSIIAPLIAP
                     FPVNQQDLLNIKGEMTAQNILGTDSGGRDNFSRLLYAGRISLSIGITSTIGMLLIGIT
                     VGVISGYFGGIVDTLLMRITEFVMLFPFLIFAIVLNAALGDKIKNPYGSAIILVLVII
                     VLSWGGIARLVRGKVLQEKENEYFLAAKSIGTPTYKIILKHLLPNILSVVIVQATLLF
                     AGMIVVESGLSFLGFGISKAIPSWGNMLSDAQEGDVISGKPWIWMPPAIMITLTILSI
                     NFVGEGIKDAFNPRGRR"
     gene            complement(1985..2947)
                     /locus_tag="O7798_002179"
     CDS             complement(1985..2947)
                     /locus_tag="O7798_002179"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499484.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HDC2864404.1"
                     /translation="MIKLILKRLGLMIPLLILISIVVFSLAIIQPGDPFSDLQNGKIK
                     QEAINAQREKLGLNDSIPHQYIRWVNHVIHGDLGESIKYKRPVIDVIEERIPNTILLG
                     AMSLIITYIISFALGITSGRYSYSLTDYTVQIFNYLMLAIPSFIAGVFAIFIFSFELQ
                     WFPFQGSVDINLKEGTFEYYMSKIYHTFLPAFTLGLLSTAGYIQYLRNDIIENSKKDY
                     VLTARSKGLSMNKIYNKHILRNSLIPIITFLGADIVSILGGAVITETIFSYNGIGKLF
                     LESVIGQDYPLMMALTLFFSFLGLLGNLISDITYGFIDPRIRSN"
     gene            complement(2940..3919)
                     /locus_tag="O7798_002180"
                     /pseudo
     CDS             complement(2940..3919)
                     /locus_tag="O7798_002180"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499483.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="dipeptide ABC transporter ATP-binding protein"
     gene            complement(3922..4908)
                     /locus_tag="O7798_002181"
     CDS             complement(3922..4908)
                     /locus_tag="O7798_002181"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499482.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HDC2864405.1"
                     /translation="MNNVLLEVKDLETSLKINNEWLATVENISFELSKGEVLGIVGES
                     GCGKSILSKSIIKLLPEKISKLSNGEVIFDGKRIDTLNEKQLLDIRGNDIAMIFQEPM
                     TALNPVFTIKNQLVESIKSHKKISKKEANKLAKDLLKKVGIARQDEILNSYPHQLSGG
                     MRQRVMIAMAISCSPKLLIADEPTTALDVTIQAQILDLLKELQKETQMAIMMITHDLS
                     VVAEFCDKVLVMYAGQIVEFGGIKEILHNPKHPYTQKLLSTIPKLKEEQKRLETIEGI
                     VPSIQAFHVNKCRFANRCNKKLDICNNQSPKMHVCEDVIVRCHLYKNEYKEI"
     gene            complement(4959..6662)
                     /locus_tag="O7798_002182"
     CDS             complement(4959..6662)
                     /locus_tag="O7798_002182"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002486566.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HDC2864406.1"
                     /translation="MKYISILLIVVLVLSACGKSSNKDEGVKDATKTETSKHKGGTLN
                     VALTAPPSGVYSSLLNSTHADSVVEGYFNESLLATDKKIRPKAYIASWKDIEPAKKIE
                     FKIKKGIKWHDGNELKIDDWIYSIEVLANKDYEGAYYPSVENIQGAKDYHEGKTDHIS
                     GLKKIDDYTMQVTFDKKQENYLTGFITGPLLSKKYLSDVPIKDLAKSDKIRKYPIGIG
                     PYKVKKIVPGEAVQLVKFDDYWQGKPALDKINLKVIDQAQIIKAMEKGDIDVANDATG
                     AMAKDAKSSNAGLKVLSAPSLDYGLIGFVSHDYDKKANKTGKVRPKYEDKELRKAMLY
                     AIDREKWIKAFFNGYASEINSFVPSMHWIAANPKDLNDYKYDPEKAKKILDKLGYKDR
                     DGDGFREDPKGNKFEINFKHYSGSNPTFEPRTAAIKDFWEKVGLKTNVKLVEFGKYNE
                     DLANASKDMEVYFRSWAGGTDPDPSDLYHTDRPQNEMRTVLPKSDQYLDDALDFEKVG
                     IDEKKRKDIYVKWQKYMNDELPGLPMFQGKSITIVNDKVRNLDIEIGTDQSLYNLTKE
                     A"
BASE COUNT         2172 a         1176 c          921 g         2398 t
ORIGIN      
        1 tttaagaaat actgttataa tgataattat taaaatatta ctaagaaagt aggcatttaa
       61 atggagacat tattttcagg catccaacct agtggaattc ctactattgg aaattatatt
      121 ggcgcactaa aacaatttgt tgatgtgcaa aatgactatg attgttattt ctgtatcgta
      181 gatcaacatg caattacaat gccacaagat cgtttaaaat tacgtaaaca gaccagacaa
      241 ttagcagcga tttatttagc ttctggtata gatccagaca aagcaacatt gttcatacaa
      301 tctgaagtcc ctgcacacgt acaagcagga tggatgttaa ctacgattgc ttctgttgga
      361 gaattagagc gtatgacgca atacaaagat aaagctcaga aagcagttga aggtatacct
      421 gctggtctat taacatatcc acctttaatg gcagctgata ttgttcttta caatactaat
      481 atcgttccag ttggagatga ccaaaagcag catatcgaat tgactcgtaa ccttgtagat
      541 agatttaata gtcgctataa tgatgtgctt gtgaaacctg aaattcgtat gcctaaagtt
      601 ggtggacgtg tcatgagttt acaagaccca acaagaaaaa tgagtaagag tgatgataat
      661 gctaaaaact tcatttcatt attagacgag ccgaatgttg cagctaaaaa aattaaaagc
      721 gcagtaactg attcagatgg tattattaaa tttgatcgtg acaacaagcc aggtataaca
      781 aatttaattt caatatacgc tggattaaca gacatgccaa ttaaagatat tgaggcaaaa
      841 tatgagggcg aaggttatgg taaatttaaa ggtgaccttg ctgaaatagt taaagcattt
      901 ttagtagaat tccaagaaaa atacgaaagt ttctataact cagataaact tgatgatatt
      961 ttagatcaag gtagagataa agcacacaaa gtttcattta aaactgtcaa aaaaatggaa
     1021 aaagcgatgg gtttaggacg taagagataa aataaagagg tactagaatt aactagtgcc
     1081 tcttttatta tttaacgtct acctctagga ttaaaagcat ctttaatccc ttcccctaca
     1141 aagtttatac ttaatatagt taatgtaatc attatagcag gtggcatcca tatccacggt
     1201 ttaccactta taacatcccc ttcttgagca tcactcaaca tattacccca agatggtatt
     1261 gctttactaa ttccgaatcc taaaaagctc aatcctgatt ccactacaat cataccggca
     1321 aataacaatg ttgcttgtac gataactaca cttaatatat tcggcaaaag atgtttcaaa
     1381 ataattttat atgtgggtgt accaattgat tttgctgcca aaaagtattc attttctttt
     1441 tcttgaagta ctttaccacg aacaagtctt gcaatacctc cccaacttaa tacgataata
     1501 actagaacaa gaattatggc agatccataa ggatttttaa ttttatctcc aagtgcagca
     1561 tttaatacaa ttgcaaatat taaaaatgga aataacataa caaattcggt tattctcatt
     1621 aataatgtat caacaatacc tccaaaataa ccagaaatca ctccaactgt aattccaatc
     1681 aaaagcattc ctattgtaga tgtaattcca atggataatg aaatacgacc tgcatataac
     1741 aaacgactaa agttatccct accaccagag tctgtaccaa gaatgttttg tgctgtcatt
     1801 tcacctttta tatttaataa atcttgttgg ttcactggaa aaggagctat taatggcgct
     1861 ataattgata caatagttat gattaataaa aaaataaccg ataacattgc aattttatta
     1921 tgaataaatt tagaaaatgc aattttaaaa ggcgattttg acttattttg cattctaatc
     1981 ccccctagtt acttctaatt cttggatcta taaatccata agtaatatca gaaatcaaat
     2041 tacccagtaa acctaaaaat gagaaaaata acgttaatgc catcattaat ggatagtctt
     2101 ggcctattac cgattctaaa aataatttac cgataccgtt atatgaaaag atagtctccg
     2161 taatcacggc tccacctaaa atacttacaa tatcagcacc taaaaatgta ataataggta
     2221 ttagagaatt tctcaatata tgtttattat aaattttatt catagataat ccttttgacc
     2281 ttgccgtcaa tacataatct tttttagaat tttcaataat atcattacgt aaatattgaa
     2341 tataaccagc agtagataat aaacctaaag tgaatgcagg taaaaatgtg tgatatattt
     2401 tactcatata atattcaaaa gtaccttctt taaggttaat atcaacagaa ccttgaaacg
     2461 ggaaccattg taattcaaaa gaaaaaataa aaattgcaaa tactcccgca ataaaagatg
     2521 gaatggctaa catcaaataa ttaaatattt gcacagtata atccgtcaaa ctgtaagaat
     2581 atctacctga cgttattcct aaagcaaatg agataatata agtaataatt aatgacatag
     2641 caccgagtaa tattgtattt ggaattcttt cctcaataac atcaattacc ggccttttat
     2701 atttgattga ctcccctaaa tcaccgtgta taacatgatt gacccatcta atgtattgat
     2761 gtggtattga gtcgttgaga cctaattttt ccctttgtgc atttattgct tcttgtttta
     2821 ttttaccgtt ttgtagatct gaaaatggat ctcctggttg tatgattgct aatgaaaata
     2881 caactattga gattaaaatt agtaacggga tcattaaccc taatctttta agtattaatt
     2941 taatcattta aatcacctac tttatctacg tagaaacaag caacttgatg ttcattacca
     3001 atgtccttta attctggcat actttttttg cacatatctt gagcaattgg acatcttgta
     3061 tgaaaaggac aaccttgcgg cggattactt ggcgaaggta attctccttt taatataatt
     3121 ctattgttat tatgtttatc aatttgtggt attgatgaaa tcaacgcttt tgtatatgga
     3181 tgtttgggat tttcataaat ttctttatca gatgcgattt caactatatg acctaaatac
     3241 ataactccaa tgacatcact tatatgtttt actacactta aatcatgtgc gataaataaa
     3301 tagcttaagt taaattgttc ttgtaaatct tttaataaat tcagtacttg agattgaaca
     3361 gatacatcta atgcacttac aggctcatca gcaacaatta aactcggacg caaagccaat
     3421 gctcttgcaa ttcccactct ttgtctctgt ccacctgaaa attcatgtgc atatttataa
     3481 tatgcatctt cacttaggcc aacacatttt aataaatata gtacttcttt tttatttctt
     3541 cttttggcaa ttttttataa tttaaaatag gttctgaaat gatatctcca accatttgca
     3601 tcggattcaa tgatgcatac ggatcttgaa atatcatctg atattgttgt cgtgattttc
     3661 tgagtttttt accttgtaat cttgttatat cttcaccatt aacaattatt gagcctgaag
     3721 ttgcatcttc aagcctgata atcactttac ctaacgttga cttaccacaa cccgattctc
     3781 ctactaatcc aaaagtttgt ccttttttta ttgaaaacga tacgtcatca acagctttaa
     3841 cgtactgagt tttttgtaat aatccagttt taattttgta gtattttttt atttggttga
     3901 cttctaaaat attttccatt cttatatctc cttatattca tttttgtaca aatgacaacg
     3961 tacaatgacg tcttcacaaa catgcatttt aggagattga ttattacaaa tatccagttt
     4021 tttgttacat ctatttgcaa atctgcactt attaacgtga aatgcttgga ttgatggcac
     4081 aattccttct atcgtttcaa gtcgtttctg ctcttcttta agttttggaa ttgttgataa
     4141 taatttttgg gtataaggat gtttcggatt gtgtagtatt tcttttatgc ctccaaattc
     4201 tacaatttga cctgcataca taactaagac tttatcgcaa aactcagcaa ctacactcaa
     4261 atcatgtgta atcatcataa ttgccatttg cgtttccttt tgcaattctt ttaataagtc
     4321 taatatttgc gcttgaatcg tgacatccaa tgctgttgta ggttcatcag caattaataa
     4381 tttaggagaa catgaaatgg ccattgcaat cattactctt tgtctcatac caccagataa
     4441 ttgatgagga tagctattta atatttcatc ttgtctagca attccaactt tttttagtaa
     4501 atcttttgct aatttatttg cttctttttt agaaattttt ttatgtgatt ttatagattc
     4561 cacaagttga ttttttatgg taaatacagg atttaaagca gtcataggtt cttgaaaaat
     4621 catagcaata tcatttcctc gaatatctag caattgcttc tcattgagcg tatcgattcg
     4681 tttaccatca aatataactt ctccattact tagtttagat atcttttctg gtaataattt
     4741 aataattgac ttacttaata tggacttacc gcaaccagat tcccctacta tacccaaaac
     4801 ttctccttta gataattcaa aagaaatatt ttcaacagtt gctaaccatt cattatttat
     4861 ttttaatgat gtttctaaat ctttaacctc taacaataca ttattcataa catcccccca
     4921 tataagtaaa cctcgacaaa atcgtcgagg ttacattact aagcttcttt agttaaatta
     4981 tataaacttt gatcagttcc aatttcaatg tctaagtttc gtactttatc gttaacaata
     5041 gttatcgatt taccttggaa cattggtaat ccaggtaact catcattcat atatttttgc
     5101 catttaacat aaatatcttt acgtttcttt tcatcaatgc ctactttttc gaagtctaat
     5161 gcatcatcta aatattgatc tgattttggt aaaactgttc tcatttcatt ttgaggtcta
     5221 tcagtgtggt ataaatctga tggatctgga tctgtacctc ctgcccatga tctgaagtac
     5281 acttccatat ctttagatgc atttgctaag tcttcattat atttaccgaa ttctactaac
     5341 ttcacatttg ttttcaagcc aactttttcc cagaaatctt ttatcgcagc agttcttggt
     5401 tcaaaagtag gattagaacc tgaataatgt ttaaagttaa tctcaaattt attaccttta
     5461 ggatcttctc taaatccgtc accatctcta tctttataac ctaacttatc taagattttt
     5521 ttagcttttt caggatcata tttgtaatca tttaggtcct taggattggc tgctatccaa
     5581 tgcatagatg gtacaaaact attgatttca ctagcgtaac cattgaaaaa cgctttgatc
     5641 catttttctc tatcaattgc ataaagcatt gctttacgta attctttgtc ttcatatttt
     5701 ggtctcactt taccagtttt attagctttt ttatcgtaat catgagatac gaatcctatt
     5761 aaaccgtagt ctaagcttgg cgcagataat accttgagac cagcattaga tgacttagca
     5821 tcttttgcca ttgcaccggt agcatcattc gcaacatcaa tatcgccttt ttccattgcc
     5881 ttaataattt gcgcttgatc aataactttt aaattgattt tgtctagtgc aggcttacct
     5941 tgccaataat catcaaattt aacgagttga acagcctcac ctggaacgat tttcttaact
     6001 ttatacggtc caataccaat aggatatttt cggattttat ctgatttcgc taaatcttta
     6061 attggtacat ctgataaata ttttttactt aataaaggtc cagtaataaa tcctgttaag
     6121 taattttctt gttttttatc aaatgtaacc tgcatagtgt agtcatctat tttcttcaat
     6181 ccgctaatat gatcagtttt tccttcatga taatctttcg caccttggat attttctaca
     6241 cttggataat aagcaccttc gtagtccttg ttagctaaga cttcaattga ataaatccaa
     6301 tcatcaattt tcaattcatt accatcatgc catttaatac cttttttaat tttaaattct
     6361 attttcttag ccggctcgat gtccttccat gaagcaatat atgccttagg acgtattttt
     6421 ttatcagttg ctaataagct ttcgttaaaa tatccctcaa ctacagaatc tgcatgtgta
     6481 ctatttaata acgaagaata aacaccactt ggcggtgctg ttaatgctac atttaaggta
     6541 ccacctttat gttttgaggt ttccgtttta gtagcatctt ttactccttc atctttatta
     6601 ctgctttttc cgcaagcact caacactaaa acgacaataa gaagtattga aatatattta
     6661 attagct
//
LOCUS       DALPQQ010000122         6609 bp    DNA     linear   BCT 22-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus strain K18-6-464
            SAMD00233528-rid16434743.denovo.123, whole genome shotgun sequence.
ACCESSION   DALPQQ010000122 DALPQQ010000000
VERSION     DALPQQ010000122.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMD00233528
            Sequence Read Archive: DRR236061
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 6609)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6609)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001543423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001543423.1
            Genome Coverage       :: 77x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/22/2022 17:09:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,811
            CDSs (total)                      :: 2,743
            Genes (coding)                    :: 2,689
            CDSs (with protein)               :: 2,689
            Genes (RNA)                       :: 68
            rRNAs                             :: 2, 4, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 4, 2 (16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 54
            CDSs (without protein)            :: 54
            Pseudo Genes (ambiguous residues) :: 0 of 54
            Pseudo Genes (frameshifted)       :: 27 of 54
            Pseudo Genes (incomplete)         :: 27 of 54
            Pseudo Genes (internal stop)      :: 10 of 54
            Pseudo Genes (multiple problems)  :: 10 of 54
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6609
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMD00233528-rid16434743.denovo.123"
                     /strain="K18-6-464"
                     /db_xref="taxon:1280"
                     /geo_loc_name="Japan: Niigata"
     gene            209..2023
                     /locus_tag="O7798_002183"
     CDS             209..2023
                     /locus_tag="O7798_002183"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499464.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetyltransferase"
                     /protein_id="HDC2864407.1"
                     /translation="MNKTKGFTKYKKMRYIPGLDGLRAIAVLGIIIYHLNKQWLTGGF
                     LGVDTFFVISGYLITSLLLKEYDDTGIIKLKSFWIRRLKRLLPAVIVLLMVVGTATLL
                     LKSDNIIRVKHDIIAAIFYVSNWWYIAKDVNYFEQFSFMPLKHLWSLAIEEQFYIFFP
                     VILVTLLLTIKKRYKIGFIFWGVSIISLGLMMFIYSINGDHSRVYFGTDTRLQTLLLG
                     VILAFLWPPFKLKNDPPKVVKYVIDSIGSLSFIVLILLFFIINDETNWIYDGGFYLIS
                     ILTLFIIASVVHPSTWIAKIFSNPVLVFIGKRSYSLYLWHFAVISFVHSYYVDGQIPV
                     YVYFIDISLTIIFAELSYRFIETPFRKEGIKALNWRPSYIPQFIRMAIVVTLLIPFML
                     ILVGAFNKYGKDIIGEKANSFDTTIEDNYLMRIAPIDNIHIDGLVSEKKKESSDVYNN
                     IKPLLIGDSVMVDIGESFKSSVPKSRIDGKVGRQLYQTLPLVKANYSQYKKSSDQVVL
                     ELGTNGDFTVKQLDDLLNQFGKAKIYLVNTRVPRIYEANVNRLLADAAKRKSNVTLID
                     WYKRSQGHSEYFAPDGVHLEYKGVLALKDEILKALKKK"
     gene            2226..4835
                     /gene="clpB"
                     /locus_tag="O7798_002184"
     CDS             2226..4835
                     /gene="clpB"
                     /locus_tag="O7798_002184"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499465.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent chaperone ClpB"
                     /protein_id="HDC2864408.1"
                     /translation="MDINKMTYAVQSALQQAVELSQQHKLQNIEIEAILSAALNESES
                     LYKSILERANIEVDQLNKAYEDKLNTYASVEGDNIQYGQYISQQANQLITKAESYMKE
                     YEDEYISMEHILRSAMDIDQTTKHYINNKVEVIKEIIKKVRGGNHVTSQNPEVNYEAL
                     AKYGRDLVEEVRQGKMDPVIGRDEEIRNTIRILSRKTKNNPVLIGEPGVGKTAIVEGL
                     AQRIVKKDVPESLLDKTVFELDLSALVAGAKYRGEFEERLKAVLKEVKESDGRIILFI
                     DEIHMLVGAGKTDGAMDAGNMLKPMLARGELHCIGATTLNEYREYIEKDSALERRFQK
                     VAVSEPDVEDTISILRGLKERYEVYHGVRIQDRALVAAAELSDRYITDRFLPDKAIDL
                     VDQACATIRTEMGSNPTELDQVNRRVMQLEIEESALKNESDNASKQRLQELQEELANE
                     KEKQAALQSRVESEKEKIANLQEKRAQLDESRQALEDAQTNNNLEKAAELQYGTIPQL
                     EKELRELEDNFQDEQGEDTDRMIREVVTDEEIGDIVSQWTGIPVSKLVETEREKLLHL
                     SDILHKRAVGQDKAVDLVSDAVVRARAGIKDPNRPIGSFLFLGPTGVGKTELAKSLAA
                     SLFDSEKHMIRIDMSEYMEKHAVSRLIGAPPGYIGHDEGGQLTEAVRRNPYSVILLDE
                     VEKAHTDVFNVLLQILDEGRLTDSKGRSVDFKNTIIIMTSNIGSQVLLENVKETGEIT
                     ESTEKAVMTSLNAYFKPEILNRMDDIVLFKPLSIDDMSMIVDKILTQLNIRLLEQRIS
                     IEVSDDAKAWLGQEAYEPQYGARPLKRFVQRQIETPLARMMIKEGFPEGTTIKVNLNS
                     DNNLTFNVEKIHE"
     gene            complement(4894..5763)
                     /locus_tag="O7798_002185"
     CDS             complement(4894..5763)
                     /locus_tag="O7798_002185"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499466.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HDC2864409.1"
                     /translation="MNLDWYYTFVILAKTLNYRLASEEINLTIPSIHKQIKNLEQHLN
                     VKLFETYKNQIILTEDGHTFLPIAQSFIEQYESGIKHIQLKKTMFQSKLNVVVSSYIA
                     TFIMPKFLKSFFNEHPFIDVSLHVKNENIEKDINNHTYDIGISRNQPKLREVHSEKVC
                     EGKIVLIAPNKENNHLLTEASLFEKYKIISDNHPEYWSSLKNNILNIYEKAQFLSIND
                     VHTSIKLIEMNQGISFLPLYITTNSDYNISVINTKILQAPISFTYIYSKKESPEILVF
                     IKSFKKYIANEQL"
     gene            5873..>6609
                     /locus_tag="O7798_002186"
     CDS             5873..>6609
                     /locus_tag="O7798_002186"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499467.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-isopropylmalate synthase"
                     /protein_id="HDC2864410.1"
                     /translation="MIRIQDNTIRDGMQQSNVRKSLIIKKEVLKQINKLNINSVEVGM
                     CTTIEDEFNIHQFRDILSPEKELVVLTRLNEKEIKKIVKLKIHNLVVKILLPISDLHI
                     KEKLNFSNKYYIQKIKDCLDILKKDKKGVDICFEDGTRTSREKLKEYMEIISKYQVRT
                     VTFADTVGCSTPLEYGDIFNYFVKKYSNIIFSAHCHNNLGLATANTLAAILNGAKQIE
                     TTFLGIGERAGNAPIEEIITILTKKQI"
BASE COUNT         2461 a          822 c         1192 g         2134 t
ORIGIN      
        1 ttaagttgcc gagttgcatt acaaattgga tttcgaagta agaatcatca ttggtaattt
       61 ttttaattta acagtatttt agtcaatatg attttgatga tgtcgtaatt caataatata
      121 catatgcatt tcaatattct tttaaacagc ataactaaat ttaattaagc atctaagaag
      181 aacagtttta aaagggaaga atgcaaaaat gaacaaaaca aagggtttta caaagtataa
      241 gaaaatgaga tatattccag ggctcgatgg tttgagggca atcgctgttc taggaattat
      301 tatttaccac ttaaataagc aatggttgac aggtggcttt ttaggtgtgg atacattttt
      361 tgtgatctct ggttatttaa ttacaagctt attactcaaa gagtatgatg acacaggtat
      421 cattaaattg aaaagctttt ggatacgtcg tttaaaacgt ttattaccag cagtcatagt
      481 tttattaatg gttgtaggga cagcaacctt attattaaaa tcagataata tcattagggt
      541 taaacatgat attattgctg cgatatttta tgtatcaaac tggtggtata tagcaaaaga
      601 tgttaattat tttgagcaat tttcatttat gccattaaag catttatggt ctttagcaat
      661 tgaagaacag ttttacatat ttttcccagt tattttggtt acattattgt taacaattaa
      721 aaagcgatac aaaataggat ttattttttg gggagtatca ataatttctt tagggttaat
      781 gatgtttatc tatagtatta atggggatca ttcacgagtg tattttggta cagatactag
      841 attacagaca ttgttactgg gtgttatttt agctttttta tggccaccgt ttaaattgaa
      901 aaatgatcca cctaaagttg taaaatatgt tattgatagc ataggtagtt tatcatttat
      961 agtacttata ttattatttt tcattattaa tgatgagacg aattggatat atgatggtgg
     1021 tttctattta atatccatat taacgttatt tattattgct agtgtcgttc atccatctac
     1081 atggatagcg aagatatttt caaatccagt gttagtattt atcgggaaaa ggtcttatag
     1141 tttatattta tggcattttg cagtaattag tttcgtacat agttactatg tagacggaca
     1201 gatacctgta tatgtgtact ttatagatat aagtttaaca attatatttg cagagctatc
     1261 atatcgcttt atagaaactc catttagaaa agaaggtatt aaagctttaa attggcgacc
     1321 ttcttatata ccacaattta taagaatggc aattgtagta accttgttaa ttccatttat
     1381 gttgatttta gtaggtgcat tcaataaata tggtaaagac attattggag aaaaagcgaa
     1441 tagctttgat accacaattg aagataatta tttaatgcgg atagcaccaa ttgataacat
     1501 acacattgat ggcttagtaa gtgagaagaa aaaggaatct tccgacgtat ataataatat
     1561 taaacctctt ttaatcggtg attcagtaat ggttgatatc ggtgagtcat ttaagtcatc
     1621 agttcctaag tctagaattg atggaaaagt agggcgtcaa ttgtatcaaa ccttaccttt
     1681 agttaaagcg aattattcac aatataaaaa atcatctgat caagtcgtat tagaattagg
     1741 tacaaatggc gactttactg tcaaacagct cgacgattta cttaatcaat ttggaaaagc
     1801 caagatttat ttagttaata cacgtgttcc aagaatttat gaggcaaatg taaatcgatt
     1861 attagctgac gcggcgaaac gaaagtccaa tgtcacatta attgattggt ataagcgatc
     1921 acaaggacat agtgaatatt ttgcaccaga cggtgtacat ttagagtaca aaggagtcct
     1981 agctttaaaa gatgaaatat taaaagcact taaaaagaaa taacatatgt ttaataagtc
     2041 tagttaatgt gtaacgtaac attagctaga tttttttatt caaaaaaata tttacaaata
     2101 ttaggaaatt taagtgtaaa agagttgata aatgattata ttgggactat aatataatta
     2161 aggtcaaaga aagtcaaagt caaaagtgca acttgaccaa ctctacaaat tagaggtgaa
     2221 attatatgga tataaataaa atgacatatg ctgttcaaag tgctttacaa caagcagttg
     2281 aactgagtca gcaacataaa ttacaaaata tagaaattga ggcaatttta agcgctgcct
     2341 taaatgaaag tgaaagctta tataaaagta ttttagaacg agcaaatatt gaggtagatc
     2401 aattaaacaa agcttatgaa gacaaactaa acacgtatgc atctgtagaa ggtgacaata
     2461 tacaatatgg tcaatatatt agccaacaag caaaccaatt gataactaag gctgaatcat
     2521 acatgaaaga atatgaagat gaatatattt caatggagca tattttacgt tcggcaatgg
     2581 acattgatca aacaacaaaa cattatataa ataataaagt agaagttatc aaagaaatta
     2641 ttaaaaaagt aagaggggga aatcacgtga catcacaaaa tccagaagtt aattacgaag
     2701 cattagctaa atatggccgc gacttagtag aagaagttag acaaggtaaa atggatcctg
     2761 ttataggaag agatgaagaa attcgaaata cgattcgtat tttaagtcgt aaaactaaaa
     2821 acaaccctgt gctcattggt gaaccaggtg ttggtaaaac tgcaattgtt gaaggattag
     2881 cgcaacgtat agttaagaaa gatgtgccag aatcattatt agataaaact gtttttgagt
     2941 tagatttaag cgcattagta gcgggcgcta aatatcgtgg tgaatttgaa gagagattaa
     3001 aagcagtcct aaaagaagtt aaagagtctg atggtagaat tatattattt attgatgaaa
     3061 tccatatgct tgtaggtgct ggtaaaacag atggtgccat ggatgcaggc aacatgctaa
     3121 aaccaatgtt agcacgagga gagttacatt gtattggtgc aacaacttta aatgaatatc
     3181 gagaatatat tgaaaaagat tcggcattag agcgtcgttt ccaaaaagta gcagttagtg
     3241 agcctgatgt tgaagataca atttcaattt tacgtggttt aaaagaacga tatgaagtgt
     3301 atcatggtgt gcgtattcaa gatagagcct tagttgctgc cgctgaattg tctgatcgtt
     3361 acatcactga tcgtttttta ccagataaag cgattgattt agttgaccaa gcatgtgcaa
     3421 caattcgtac ggaaatggga tcaaatccaa ctgaattgga tcaagttaat agacgtgtca
     3481 tgcaattaga aattgaagaa agcgcactta aaaatgaatc tgacaatgcg agcaaacaga
     3541 gattacaaga actacaagaa gagcttgcca atgaaaaaga gaaacaagca gcacttcaat
     3601 ctcgtgtaga atcagaaaaa gaaaaaatag caaatttaca agaaaaacgt gcgcaactag
     3661 atgaaagtag acaagcgttg gaagatgcac aaacaaataa caatttagaa aaagctgctg
     3721 aactacaata tggaacaatt cctcaattgg aaaaagaact tagagaatta gaggataatt
     3781 tccaagatga gcaaggtgaa gatacagatc gaatgattcg tgaagttgta acagacgaag
     3841 aaattggcga tattgtcagc caatggacag gcataccagt ttcaaaatta gttgaaacag
     3901 aacgtgaaaa attacttcac ttaagtgaca tcttgcataa acgtgctgta ggtcaagata
     3961 aagcggttga cctggtttca gatgcagtag ttagagcaag agcaggtatt aaagatccaa
     4021 acagacctat tggtagtttc ttattcctag gtccaactgg agtaggtaaa actgaattag
     4081 ctaaatcatt agctgcatca ttatttgatt ctgaaaaaca tatgattcgt attgatatga
     4141 gtgaatatat ggaaaaacat gcagtatcaa gattgatagg ggcacctcca ggatatattg
     4201 gacatgatga agggggtcaa ttaactgaag cggttcgtcg taatccatac tcagttattt
     4261 tattagatga ggttgaaaaa gcgcatactg acgtctttaa tgtattattg caaattttag
     4321 atgaaggccg tttaactgat tctaaaggac gtagcgttga ttttaaaaat actattatta
     4381 ttatgacaag taatattgga tctcaagttt tattagaaaa cgtaaaagag actggtgaaa
     4441 ttacagaatc aacagaaaaa gctgttatga caagtttaaa tgcatatttc aaaccagaaa
     4501 ttttgaatcg tatggatgat atcgtattat ttaaaccatt atctattgat gacatgagta
     4561 tgattgtaga taaaatctta acgcaattaa atataagatt attagaacaa cgaatctcaa
     4621 ttgaagtttc tgatgatgct aaagcttggc taggtcaaga agcttatgaa cctcaatacg
     4681 gtgcaagacc attaaaacgt tttgtacaac gccaaattga aacaccatta gcacgtatga
     4741 tgattaaaga gggattccca gaaggtacaa cgattaaagt taatttaaat tcagacaata
     4801 acttaacgtt taatgttgaa aaaattcatg aataaaattg aaccaagaat gtgatgatta
     4861 atcgcattct tggtttttta gatttgaaat ttattataat tgttcattgg caatatactt
     4921 tttaaatgat ttaataaaca ccaatatttc tgggctttct tttttgctgt atatatatgt
     4981 aaatgaaata ggtgcttgta aaattttcgt gttaataacc gaaatattgt aatcactatt
     5041 tgttgttata taaagaggca ggaatgatat accttgattc atttcgatta atttaattga
     5101 agtatgcaca tcattgatag atagaaattg tgctttttca taaatattta aaatattatt
     5161 tttaagtgat gaccaatatt ctggatggtt atcacttatt attttgtatt tttcaaataa
     5221 agatgcctca gttagaagat gattattctc tttattggga gcaatcaata caattttacc
     5281 ttcgcatact ttttcagaat gaacttctct tagtttaggt tgatttctgc taatcccgat
     5341 gtcatacgta tgattattaa tatctttttc aatattttca tttttgacat gaagagaaac
     5401 atcgataaaa ggatgctcgt taaagaaaga ttttaaaaat ttgggcataa tgaatgtcgc
     5461 gatatatgaa gacacgacaa catttaattt cgattgaaac atcgtttttt taagttggat
     5521 atgtttgatg ccactttcat attgttcaat aaaactttgc gcaattggaa gaaatgtatg
     5581 accatcttca gtcaagataa tttgattttt ataagtttca aatagtttca cattgagatg
     5641 ctgttctaaa tttttaattt gcttatgtat agaaggtata gtgagattaa tttcttcact
     5701 agctaatcga tagtttaacg tcttcgctaa aatgacaaat gtatagtacc aatctaaatt
     5761 catgaactta cctctttcaa aaaagttaat aattcattag ataatattta atttttattg
     5821 cataaaaata atattaatat tatatcagag gttatcgagg gggtgaagta atatgattcg
     5881 aattcaagat aatacaataa gggatggtat gcaacaaagt aatgttcgaa aaagtctaat
     5941 tataaaaaaa gaagtattga aacaaattaa caagttaaat ataaattctg ttgaagtagg
     6001 catgtgtaca actatcgagg atgaatttaa tattcatcaa ttcagagaca ttttaagtcc
     6061 tgaaaaagaa ttagtagtat tgactaggct taatgaaaaa gaaataaaaa aaatagtcaa
     6121 attgaaaatt cataatttag tggtaaaaat actattgcca atatctgact tgcatataaa
     6181 agaaaagctt aatttttcaa ataaatatta tattcagaaa atcaaagact gcttggatat
     6241 attaaagaaa gataaaaaag gagtagatat ttgttttgaa gatggaacaa ggacttctag
     6301 agaaaaattg aaagaataca tggaaattat ttcaaaatat caagttagaa cagttacatt
     6361 tgcggacact gtaggatgtt cgacaccatt agaatacgga gatattttta attactttgt
     6421 aaaaaaatat tctaacataa ttttttctgc tcattgtcat aacaatctag ggttggctac
     6481 tgcaaataca ttagctgcaa ttttaaatgg tgcaaagcaa atagaaacta catttttggg
     6541 aattggtgag agagcgggta atgctcctat tgaggaaata attactattt tgacaaaaaa
     6601 acaaataga
//
LOCUS       DALPQQ010000123         6512 bp    DNA     linear   BCT 22-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus strain K18-6-464
            SAMD00233528-rid16434743.denovo.124, whole genome shotgun sequence.
ACCESSION   DALPQQ010000123 DALPQQ010000000
VERSION     DALPQQ010000123.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMD00233528
            Sequence Read Archive: DRR236061
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 6512)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6512)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001543423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001543423.1
            Genome Coverage       :: 77x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/22/2022 17:09:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,811
            CDSs (total)                      :: 2,743
            Genes (coding)                    :: 2,689
            CDSs (with protein)               :: 2,689
            Genes (RNA)                       :: 68
            rRNAs                             :: 2, 4, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 4, 2 (16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 54
            CDSs (without protein)            :: 54
            Pseudo Genes (ambiguous residues) :: 0 of 54
            Pseudo Genes (frameshifted)       :: 27 of 54
            Pseudo Genes (incomplete)         :: 27 of 54
            Pseudo Genes (internal stop)      :: 10 of 54
            Pseudo Genes (multiple problems)  :: 10 of 54
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6512
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMD00233528-rid16434743.denovo.124"
                     /strain="K18-6-464"
                     /db_xref="taxon:1280"
                     /geo_loc_name="Japan: Niigata"
     gene            complement(120..1475)
                     /locus_tag="O7798_002187"
     CDS             complement(120..1475)
                     /locus_tag="O7798_002187"
                     /EC_number="5.4.2.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500881.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoglucosamine mutase"
                     /protein_id="HDC2864411.1"
                     /translation="MGKYFGTDGVRGVANQELTPELAFKLGRYGGYVLAHNKGEKHPR
                     VLVGRDTRVSGEMLESALIAGLISIGAEVMRLGIISTPGVAYLTRDMGAELGVMISAS
                     HNPVTDNGIKFFGSDGFKLSDEQENEIEALLDQENPELPRPVGNDIVHYSDYFEGAQK
                     YLSYLKSTVDVNFEGLKIALDGANGSTSSLAPFLFGDLEADTETIGCSPDGYNINEKC
                     GSTHPEKLAEKVVETESDFGLAFDGDGDRIIAVDENGQIVDGDQIMFIIGQEMHKNQE
                     LNNDMIVSTVMSNLGFYKALEQEGIKSNKTKVGDRYVVEEMRRGNYNLGGEQSGHIVM
                     MDYNTTGDGLLTGIQLASVIKMTGKSLSELAGQMKKYPQSLINVRVTDKYRVEENVDV
                     KEVMTKVEVEMNGEGRILVRPSGTEPLVRVMVEAATDEDAERFAQQIADVVQDKMGLD
                     K"
     gene            complement(1502..2434)
                     /locus_tag="O7798_002188"
     CDS             complement(1502..2434)
                     /locus_tag="O7798_002188"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500882.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YbbR-like domain-containing protein"
                     /protein_id="HDC2864412.1"
                     /translation="MLESKWGLRFIAFLLALFFFLSVNNVFGNIFNTGNLGQKSSKTI
                     QDVPVEILYNTKDLHLTKAPETVNVTISGPQSKIIKIENPEDLRVVIDLSNAKAGKYQ
                     EKYQVKGLADDIHYSVKPKLANITLENKVTKKMTVQPDVSQSDIDPLYKITKQEVSPQ
                     TVKVTGGEEQLNDIAYLKATFKTNKKINGDTKDVAEVTAFDKKLNKLNVSIQPNEVNL
                     QVKVEPFSKKVKVNVKQKGSLADDKELSSIDLEDKEIEIFGSRDDLQNISEVDAEVDL
                     DGISESTEKTVKINLPEHVTKAQPSETKAYINVK"
     gene            complement(2436..3245)
                     /locus_tag="O7798_002189"
     CDS             complement(2436..3245)
                     /locus_tag="O7798_002189"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500883.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR00159 family protein"
                     /protein_id="HDC2864413.1"
                     /translation="MDFSNFFQNLSTLKIVTSILDLLIVWYVLYLLITVFKGTKAIQL
                     LKGILVIVIGQQISMILNLTATSKLFDIVIQWGVLALIVIFQPEIRRALEQLGRGSFL
                     KRYTSNTYSKDEEKLIQSVSKAVQYMAKRRIGALIVFEKETGLQDYIETGIAMDSNIS
                     QELLINVFIPNTPLHDGAMIIQGTKIAAAASYLPLSDSPKISKSLGTRHRAAVGISEV
                     SDAFTVIVSEETGDISVTFDGKLRRDISNEIFEELLAEHWFGTRFQKKGVK"
     gene            complement(3434..4342)
                     /gene="rocF"
                     /locus_tag="O7798_002190"
     CDS             complement(3434..4342)
                     /gene="rocF"
                     /locus_tag="O7798_002190"
                     /EC_number="3.5.3.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500884.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arginase"
                     /protein_id="HDC2864414.1"
                     /translation="MTKTKAIDIIGAPSTFGQRKLGVDLGPTAIRYAGLISRLKQLDL
                     DVYDKGDIKVPAVNIEKFHSEQKGLRNYDEIIDVNQKLNKEVSASIENNRFPLVLGGD
                     HSIAVGSVSAISKHYNNLGVIWYDAHGDLNIPEESPSGNIHGMPLRILTGEGPKELLE
                     LNSNVIKPENIVLIGMRDLDKGERQFIKDHNIKTFTMSDIDKLGIKEVIENTIEYLKS
                     RNVDGVHLSLDVDALDPLETPGTGTRVLGGLSYRESHFALELLHQSHLISSMDLVEVN
                     PLIDSNNHTAEQAVSLVGTFFGETLL"
     gene            4568..5770
                     /locus_tag="O7798_002191"
     CDS             4568..5770
                     /locus_tag="O7798_002191"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001817805.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ISL3 family transposase"
                     /protein_id="HDC2864415.1"
                     /translation="MCNDTLELLRIKDENIKYINQEIDVIIKGKKATVVNAVLTYKPS
                     ACYCCGVKNEGQIHKHGKRVSRITLLKTQGYNTYLNLAKQRFKCLECNGTFTAKTSIV
                     DESCFISRCVTQKVIEEATKVKTEIDTAEDNCISPSTVSRIRTKAANSLRIKPFNCLP
                     EHIAMDEFKSVKNVTGSMSFIFIDNDTHDVIDILENRTTRFLRAYFERFDLKNRQQVK
                     TVTIDMYEPYVRLFRDLFPNAAIIFDRFHIVQHLNRELNKYRVQVMNEYRNKKGPDYT
                     IFKNNWKVLLMDTSKTIFSKYRWNKSFKAYKRSSDIVEFMLSKDDILRHSYELVQGLR
                     KDLRLCNWPKFINRLNSVSKKSVSKGVWKVVKYYRKHQRMLRNTIYYPAFNNGAIEGI
                     NNKIKLIK"
     gene            5906..6010
                     /locus_tag="O7798_002192"
     CDS             5906..6010
                     /locus_tag="O7798_002192"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500886.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDC2864416.1"
                     /translation="MYFKNSSLNYIPTTFGGEPKKKHFPKMESASSEP"
     gene            complement(6001..6073)
                     /locus_tag="O7798_002193"
     tRNA            complement(6001..6073)
                     /locus_tag="O7798_002193"
                     /product="tRNA-Lys"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(6038..6040),aa:Lys,seq:ttt)
     gene            complement(6077..6151)
                     /locus_tag="O7798_002194"
     tRNA            complement(6077..6151)
                     /locus_tag="O7798_002194"
                     /product="tRNA-Gln"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(6117..6119),aa:Gln,seq:ttg)
     gene            complement(6161..6244)
                     /locus_tag="O7798_002195"
     tRNA            complement(6161..6244)
                     /locus_tag="O7798_002195"
                     /product="tRNA-Tyr"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(6208..6210),aa:Tyr,seq:gta)
     gene            complement(6274..6349)
                     /locus_tag="O7798_002196"
     tRNA            complement(6274..6349)
                     /locus_tag="O7798_002196"
                     /product="tRNA-Val"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(6314..6316),aa:Val,seq:tac)
     gene            complement(6357..6428)
                     /locus_tag="O7798_002197"
     tRNA            complement(6357..6428)
                     /locus_tag="O7798_002197"
                     /product="tRNA-Glu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(6393..6395),aa:Glu,seq:ttc)
     gene            complement(6430..6504)
                     /locus_tag="O7798_002198"
     tRNA            complement(6430..6504)
                     /locus_tag="O7798_002198"
                     /product="tRNA-Asn"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(6470..6472),aa:Asn,seq:gtt)
BASE COUNT         2102 a         1238 c          935 g         2237 t
ORIGIN      
        1 attacatatt gattactttg tttttatttt gtttatatca ttttacgttt gtactataaa
       61 ttatttctac aaacacaaaa aaccgatgca tacgcatcgg ctcatttgta atacagtatt
      121 tatttatcta atcccatttt atcttgaacc acatcagcta tttgttgtgc aaatctttca
      181 gcatcttcat cagttgctgc ttcaaccatg acacgaacta atggttctgt tccagaaggt
      241 cttactaaaa ttcgaccttc tccattcatt tctacttcta ctttagtcat aacttcttta
      301 acgtcaacat tttcttcaac acgatattta tctgttacgc gtacgttaat taatgattgt
      361 ggatattttt tcatttgtcc agctaattca cttagtgatt taccagtcat ttttattaca
      421 gaagctaatt gaataccagt taataaacca tcaccagttg tattgtaatc catcataacg
      481 atatgtccag attgttctcc acctaagtta taattaccgc gacgcatttc ttctactaca
      541 tatctgtcgc caactttagt tttattagat ttaattcctt cttgttcaag cgctttgtaa
      601 aaacctaaat tactcataac agtagaaaca atcatgtcat tattcaattc ttgattttta
      661 tgcatttctt gaccaataat aaacataatt tggtcaccgt caacgatttg accattctca
      721 tctactgcta tgattctgtc tccatcgccg tcaaatgcta acccaaaatc actttcagtt
      781 tcaactactt tttcagctaa tttttcagga tgtgtagagc cacatttctc attgatatta
      841 tatccatcag gactacatcc aattgtttca gtatctgctt ctaagtcacc aaataagaat
      901 ggcgctagtg atgatgttga accatttgca ccatctaaag caattttcaa accttcaaag
      961 ttaacatcta ctgttgattt taaatagctc aaatattttt gtgccccttc aaagtaatct
     1021 gaataatgta caatatcatt gccaactggt cttggtaatt ctgggttttc ttgatccaat
     1081 aatgcttcaa tttcattttc ttgttcatct gatagtttaa aaccatctga tccaaagaat
     1141 ttaataccat tatctgtaac tggattatga gaggctgaaa tcattacacc taactctgca
     1201 cccatatcgc gtgttaaata tgcaacacct ggtgttgaaa taatacctaa tcgcatcact
     1261 tctgcaccaa ttgaaatcaa accagctatt aatgctgatt ctaacatttc acctgaaact
     1321 ctagtatcgc gacctacaag tacacgtggg tgtttttcac ctttattatg tgctagaaca
     1381 tagccaccgt atcttcctaa tttaaatgcc aattcaggtg ttagttcttg gtttgcgaca
     1441 cctcttactc cgtctgtacc aaaatatttt cccattgttt actctccttt aatttagcta
     1501 tttattttac atttatataa gccttcgttt cacttggttg tgctttagtg acatgttctg
     1561 gtaaattgat ttttacagtc ttttcagttg attctgaaat accatctaaa tctacttctg
     1621 catcaacttc gcttatattt tgtaagtcat ctcgactacc gaagatttca atttctttat
     1681 cttctaaatc aatcgaactt aactctttat catctgctaa actacctttc tgtttaacat
     1741 ttactttaac ctttttgcta aaaggctcta ctttaacttg taaattcact tcattaggtt
     1801 gaatcgatac atttaattta ttcagttttt tatcaaaagc cgttacttct gcgacatctt
     1861 ttgtgtcacc attaatcttt ttattagttt taaaagtggc ttttaaataa gcgatatcat
     1921 tcaattgttc ttctccacct gttactttaa ctgtttgtgg tgaaacttct tgctttgtaa
     1981 ttttataaag tggatcaata tcactctgac ttacatcagg ttgaactgtc atctttttag
     2041 ttactttgtt ttcaagcgta atatttgcta atttaggttt tacagaataa tgaatgtcat
     2101 cagctaaccc tttaacttga tacttctctt gatattttcc agctttagca tttgataaat
     2161 caatcactac tcttaaatct tctggatttt caatttttat tatctttgat tgtggtcctg
     2221 aaatagtcac attaactgtt tcaggcgctt ttgttaaatg caaatcttta gtgttataaa
     2281 gaatttcaac gggtacatct tgaatcgttt tactagactt ttgaccaaga ttaccagtgt
     2341 taaagatatt tccaaaaaca ttgttaacag ataaaaagaa aaacaatgcc aaaagaaagg
     2401 caataaatct caagccccat ttactttcta gcatattatt tcacaccttt cttttgaaag
     2461 cgtgtgccaa accaatgttc agcaagcaac tcttcaaaaa tttcgtttga aatgtctcgt
     2521 cgtaattttc catcaaatgt taccgaaata tcaccagttt cttcagatac aataacggta
     2581 aatgcatcag atacttctga aataccaacc gcagctctat gtcttgtacc caaactttta
     2641 gatatcttag gactatcaga caatggcaaa taacttgctg ctgctgcaat cttcgtgcct
     2701 tgaataatca ttgcaccatc atgtaaaggt gtgttaggta taaagacatt aattaaaagt
     2761 tcttgcgaaa tatttgaatc cattgcaata cctgtttcaa tataatcttg aagacctgtt
     2821 tctttttcaa agacaattaa tgcacctata cgtcttttag ccatatattg cacagccttt
     2881 gaaaccgatt gaatcaattt ctcttcatct ttactatacg tattagaagt atagcgtttt
     2941 aaaaagctac ctctaccaag ttgttctaac gcacgtctaa tttctggttg gaatattact
     3001 attaaagcta atacccccca ttgaataacg atatcgaata atttagatgt tgcagtcaag
     3061 ttcaatatca tacttatctg ctgaccaata acaattacta atatcccttt aagtaattgt
     3121 atcgctttag ttcccttaaa gaccgtgatg agaagataaa gtacatacca aactatcagt
     3181 aaatcaagga tactcgttac aatttttaac gtactgaggt tttgaaaaaa gttggaaaaa
     3241 tccataacat ctcctccggg taatattttt ccataatacc cattatacca atcatttaca
     3301 tcactgtcat acgaacatat atttaaatag aaaaaattta ttttaaagat tataactact
     3361 cttaatcatt ttagtgaatt aaaaaaagta gtgcaaaaag caaaatatac tttatacact
     3421 acaaatcatt tatttataat aaagtttcac caaaaaatgt tccaactaat gaaaccgctt
     3481 gttcagcagt atgattatta ctgtcaatca atggatttac ttcaactaaa tccattgagg
     3541 aaattaaatg tgattgatgc agtaattcca atgcaaaatg gctttctcta taactaagac
     3601 cacccaaaac tctagtacca gtgcctggcg tttcaagcgg atctaaagca tcaacatcta
     3661 aagataaatg aacgccatca acattgcgtg acttcaaata ttctattgta ttttcaatta
     3721 cttcctttat ccccaattta tcaatatctg acatagtaaa tgttttaata ttatgatctt
     3781 tgataaattg tctttcacct ttatctaaat ctctcatacc aattagtacg atgttttctg
     3841 gcttgattac attactattt aattctaaaa gttctttggg accttcgcct gtcaaaatcc
     3901 ttagaggcat accatgaata tttccacttg gtgactcttc aggtatattt aaatcaccat
     3961 gtgcatcata ccaaataaca cctaaattat tataatgttt acttattgct gatactgaac
     4021 ctaccgcaat agaatgatct ccaccaagaa ctagaggaaa tctgttattt tcaattgatg
     4081 ctgaaacctc tttatttaat ttttgattaa catctataat ttcatcataa tttcttaatc
     4141 ctttttgttc actatgaaat ttttcaatgt tcacagcagg taccttaata tcccccttgt
     4201 catatacatc aaggtctaat tgctttaatc ttgaaattaa tccagcatat ctaattgctg
     4261 ttggtcctaa atcaacacct aattttcttt gtccaaatgt tgatggtgca cctataatat
     4321 caattgcttt tgtctttgtc ataagcgtcc ccctttgctc tatgtaatta aagaataatg
     4381 tatgcgctta ccattatcaa gcaatagcta cacatataat ctgtttatct tattacttca
     4441 taaaaaaagg ttcttcatct tttatggtgg gaaggtaaaa cttcctgctt tttttaatac
     4501 acaaaaagcg caattgcctc tataatttaa agtgaccaaa cccaaactaa aggagacaag
     4561 tgcgcctatg tgtaatgata ccttagaatt actaagaata aaagatgaaa atataaaata
     4621 tataaaccaa gaaattgacg tcattatcaa aggaaaaaaa gcaacagtgg ttaatgctgt
     4681 actaacgtat aagccttcgg cctgttattg ttgtggagtt aaaaatgaag gacaaattca
     4741 taaacatggt aagcgtgttt ctcgtattac tttacttaaa actcaagggt ataacacata
     4801 cctcaactta gctaaacaac gttttaaatg cttagaatgc aatggcactt ttactgctaa
     4861 aacgtcaatt gttgatgagt cgtgttttat ctcaagatgt gttactcaaa aagttataga
     4921 agaagctact aaagttaaaa cagagattga tactgcagaa gataactgta tctctccatc
     4981 tactgtaagt cgtattagaa ctaaagcggc taattcatta cgaattaaac cctttaattg
     5041 tttgccagaa cacatcgcta tggatgaatt taaaagcgtt aaaaatgtaa ctggatcaat
     5101 gagtttcatt tttatagata atgatactca tgatgttata gatattttag aaaatagaac
     5161 tacaagattc ttgcgtgcct atttcgagcg attcgattta aaaaatcgac aacaagttaa
     5221 gacggttact attgacatgt atgaacccta tgtccgatta tttcgcgacc tatttcctaa
     5281 tgcagctatt atttttgaca gattccatat cgttcaacat ttaaatagag aacttaataa
     5341 gtatcgtgta caagttatga atgaataccg taataaaaaa ggacctgatt atacaatttt
     5401 taagaataac tggaaagtcc tattgatgga tactagtaaa accatattta gtaaatacag
     5461 atggaataaa tcttttaagg cttataaacg ctcatctgac attgtagaat tcatgctttc
     5521 aaaagacgat atactacgac actcctacga acttgtccaa ggattacgaa aagacctaag
     5581 gttatgtaat tggcctaaat ttattaatcg tttaaattca gttagtaaaa agtctgtgag
     5641 taagggtgta tggaaagtgg ttaaatatta tagaaaacat caaaggatgt taagaaatac
     5701 aatttattac ccagcattta ataatggtgc tatagaagga attaataata agataaaatt
     5761 aatcaagtga atttcttttg gttacagaaa tttcaacaac tttaaagcac gtataatgat
     5821 gattttcagc ttgtacaaag gagaaaaaaa gaagacaacc aagcccaata atggactggc
     5881 cgcctaataa taaaagctct aaaagttgta ttttaaaaat agttctttaa attatatacc
     5941 caccacattt ggtggagaac ctaaaaaaaa gcacttccca aaaatggaaa gtgcaagtag
     6001 tgagccatag aggattcgaa cctctgaccc tctgattaaa agtcagatgc tctaccaact
     6061 gagctaatgg ctctaatggc tgggctagct ggattcgaac caacgagtga cggagtcaaa
     6121 gtccgttgcc ttaccgcttg gctatagccc aatatataga tggtggaggg gggcagattc
     6181 gaactgccga acccgaagga gcggatttac agtccgccgc gtttagccac ttcgctaccc
     6241 ctccagctta ttcatataat ttaataatca aaatggtgga gaatgacggg ttcgaaccgc
     6301 cgaccctctg cttgtaaggc agatgctctc ccagctgagc taattctcca aaataatgac
     6361 tcctacggga ctcgaacccg tgttaccgcc gtgaaagggc ggtgtcttaa ccgcttgacc
     6421 aaggagccat ggctccacag gtaggactcg aacctacgac cgatcggtta acagccgata
     6481 gctctaccac tgagctactg tggattaata tt
//
LOCUS       DALPQQ010000124         6459 bp    DNA     linear   BCT 22-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus strain K18-6-464
            SAMD00233528-rid16434743.denovo.125, whole genome shotgun sequence.
ACCESSION   DALPQQ010000124 DALPQQ010000000
VERSION     DALPQQ010000124.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMD00233528
            Sequence Read Archive: DRR236061
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 6459)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6459)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001543423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001543423.1
            Genome Coverage       :: 77x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/22/2022 17:09:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,811
            CDSs (total)                      :: 2,743
            Genes (coding)                    :: 2,689
            CDSs (with protein)               :: 2,689
            Genes (RNA)                       :: 68
            rRNAs                             :: 2, 4, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 4, 2 (16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 54
            CDSs (without protein)            :: 54
            Pseudo Genes (ambiguous residues) :: 0 of 54
            Pseudo Genes (frameshifted)       :: 27 of 54
            Pseudo Genes (incomplete)         :: 27 of 54
            Pseudo Genes (internal stop)      :: 10 of 54
            Pseudo Genes (multiple problems)  :: 10 of 54
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6459
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMD00233528-rid16434743.denovo.125"
                     /strain="K18-6-464"
                     /db_xref="taxon:1280"
                     /geo_loc_name="Japan: Niigata"
     gene            219..533
                     /locus_tag="O7798_002199"
     CDS             219..533
                     /locus_tag="O7798_002199"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499407.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDC2864417.1"
                     /translation="MYFVLAIFTIISASVSLGYSIQACASSHNINAYYALSRSLPLFL
                     LAIFSLVIHSAIFLITISIAMILVQFLDAIVGYKSEDVFKTYGPLATSVVNLILLIVF
                     LF"
     gene            complement(539..676)
                     /locus_tag="O7798_002200"
     CDS             complement(539..676)
                     /locus_tag="O7798_002200"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499406.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chorismate mutase"
                     /protein_id="HDC2864418.1"
                     /translation="MMVDKATTQIQHDCGIRVLVFIKLIESYIKYSLDNSILVRLRFV
                     V"
     gene            complement(863..2260)
                     /gene="sufB"
                     /locus_tag="O7798_002201"
     CDS             complement(863..2260)
                     /gene="sufB"
                     /locus_tag="O7798_002201"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019469760.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Fe-S cluster assembly protein SufB"
                     /protein_id="HDC2864419.1"
                     /translation="MAKKAPDVGDYKYGFHDDDVSIFRSERGLTENIVREISNMKNEP
                     EWMLDFRLKSLKLFYKMPMPQWGGDLSELNFDDITYYVKPSEQAERSWDEVPEEIKRT
                     FDKLGIPEAEQKYLAGVSAQYESEVVYHNMEKELEEKGIIFKDTDSALQENEELFKKY
                     FASVVPAADNKFAALNSAVWSGGSFIYVPKNIKLDTPLQAYFRINSENMGQFERTLII
                     ADEGASVHYVEGCTAPVYTTSSLHSAVVEIIVHKDAHVRYTTIQNWANNVYNLVTKRT
                     FVYENGNMEWVDGNLGSKLTMKYPNCVLLGEGAKGSTLSIAFAGKGQVQDAGAKMIHK
                     APNTSSTIVSKSISKNGGKVIYRGIVHFGRKAKGARSNIECDTLILDNESTSDTIPYN
                     EVFNDQISLEHEAKVSKVSEEQLFYLMSRGISEEEATEMIVMGFIEPFTKELPMEYAV
                     EMNRLIKFEMEGSIG"
     gene            complement(2411..2875)
                     /locus_tag="O7798_002202"
     CDS             complement(2411..2875)
                     /locus_tag="O7798_002202"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499404.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SUF system NifU family Fe-S cluster assembly
                     protein"
                     /protein_id="HDC2864420.1"
                     /translation="MNFNNLDQLYRSVIMDHYKNPRNKGVLDNGSMTVDMNNPTCGDR
                     IRLTFDIEDGIIKDAKFEGEGCSISMASASMMTQAVKGHSLGEAMQMSQEFTKMMLGE
                     DYVITEEMGDIEALQGVSQFPARIKCATLAWKALEKGTVAKEGKAEGTTEEE"
     gene            complement(2865..4115)
                     /locus_tag="O7798_002203"
     CDS             complement(2865..4115)
                     /locus_tag="O7798_002203"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499403.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine desulfurase"
                     /protein_id="HDC2864421.1"
                     /translation="MNEVAEHSFDVNEVIKDFPILDQKVNGKRLAYLDSTATSQTPVQ
                     VLNVLEDYYKRYNSNVHRGVHTLGSLATDGYENARETVRRFINAKYFEEIIFTRGTTA
                     SINLVAHSYGDANVEEGDEIVVTEMEHHANIVPWQQLAKRKNATLKFIPMTADGELNI
                     EDIKQTINDKTKIVAIAHISNVLGTINDVKTIAEIAHQHGAIISVDGAQAAPHMKLDM
                     QEMNADFYSFSGHKMLGPTGIGVLFGKRELLQKMEPIEFGGDMIDFVSKYDATWADLP
                     TKFEAGTPLIAQAIGLAEAIRYLERIGFDAIHKYEQELTIYAYEQMSAIEGIEIYGPP
                     KDRRAGVITFNLQDVHPHDVATAVDTEGVAVRAGHHCAQPLMKWLNVSSTARASFYIY
                     NTKEDVDQLINALKQTKEFFSYEF"
     gene            complement(4221..5528)
                     /gene="sufD"
                     /locus_tag="O7798_002204"
     CDS             complement(4221..5528)
                     /gene="sufD"
                     /locus_tag="O7798_002204"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499402.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Fe-S cluster assembly protein SufD"
                     /protein_id="HDC2864422.1"
                     /translation="MTTDILNISEEQLVDYSKAHNEPSWMTELRKKALKLTETLEMPK
                     PDKTKLRKWDFDSFKQHDVKGDVYQSLSQLPESVREIIDVDHSKNLVIQHNNTIAYTQ
                     VDDNASKDGVIVEGLADALMNHSDLVQKYFMKDAVTVDEHRITALHTALVNGGVFVYV
                     PKNVVVEHPVQYVVLHDDENASFYNHVIIVTEESAEVTYVENYLSNASGEGNQLNIIS
                     EVIAGANSNITYGSVDYMDKGFTGHIIRRGITEADASINWALGLMNEGSQIIDNTTNL
                     FGDRSTSSLKSVVVGTGEQKINLTSKIVQYGKETDGYILKHGVMKEHASSVFNGIGYI
                     KHGGTKSIANQESRVLMLSEHARGDANPILLIDEDDVQAGHAASVGRVDPDQLYYLMS
                     RGISQREAERLVIHGFLDPVVRELPIEDVKRQLREVIERKVSK"
     gene            complement(5626..6387)
                     /gene="sufC"
                     /locus_tag="O7798_002205"
     CDS             complement(5626..6387)
                     /gene="sufC"
                     /locus_tag="O7798_002205"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499401.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Fe-S cluster assembly ATPase SufC"
                     /protein_id="HDC2864423.1"
                     /translation="MASTLEIKDLHVSIEDKEILKGVNLTINTDEIHAIMGPNGTGKS
                     TLSSAIMGHPSYEVTKGEVLLDGVNILELEVDERAKAGLFLAMQYPSEITGVTNADFM
                     RSAINAKREEGQEINLMQFIKKLDKNMDFLDIDKDMAQRYLNEGFSGGEKKRNEILQL
                     MMLEPKFAILDEIDSGLDIDALKVVSKGINQMRGENFGALMITHYQRLLNYITPDKVH
                     VMYAGKVVKSGDPELAKRLEEEGYEWVKEEFGSAE"
BASE COUNT         1983 a         1239 c          912 g         2325 t
ORIGIN      
        1 atgcattcat tagtaaaatg atgctatagt tcgagctgtt tgttattaat aaatttgcat
       61 aatgaaaaat ttcaacaaat tcagtttatg acatagttat aatcatttga aaccattata
      121 atgataacaa ccagtttctc ataaatttat tctaattatc ttttaaataa ctttagacaa
      181 gtacttgttt atatccaaat atagaaagaa ggattaacat gtattttgtt ttagcaatat
      241 ttacaataat cagtgccagt gtaagtttag gttattcaat tcaagcatgt gcatctagcc
      301 ataatataaa tgcatattat gcacttagtc gaagcttacc tttattttta ttagctattt
      361 tttctttagt cattcatagt gctatatttt tgataactat atccattgca atgatcttag
      421 ttcaattttt agatgcgatt gttggttata aaagtgaaga tgtctttaaa acttatggtc
      481 cattagcaac atctgtagtg aacttaatat tattaatagt tttcttattt taactcactt
      541 atacaacgaa tcttaatcga actaatatcg aattatctaa agaatatttg atgtagcttt
      601 caattaattt aataaagacc agcactctaa tgccacaatc atgttgtatt tgtgttgtcg
      661 ctttatccac catcaatgat tattttttac accaatcaaa aaatcgaact gatataaata
      721 agtacaaagc ttatctatca atccgattta gttataaaac aaaaaaagcc acagtaatgt
      781 ggctttttgt tatattcagt atcaaaatgg tatcaatagc cattttcgga agtcaagaat
      841 ggcttaacaa cgcggtttaa agctatccaa tactaccttc catttcgaac ttgattaaac
      901 ggttcatttc gaccgcgtat tccattggaa gttcttttgt aaatggttcg atgaatccca
      961 taacaatcat ttctgtcgct tcttcttcag aaataccacg actcattaga tagaataatt
     1021 gttcttcaga aacttttgaa accttggctt catgttctaa tgatatttga tcgttgaata
     1081 cttcgttata tggaattgta tctgatgttg attcgttatc taagattaat gtatcacatt
     1141 caatatttga acgagcacct tttgctttac gtccaaaatg aacaataccg cgataaataa
     1201 ctttaccacc atttttagaa atagatttag aaacaattgt agaagatgta ttaggtgctt
     1261 tatgaatcat tttagcaccg gcatcttgaa cttgtccttt accagcaaat gcaatagata
     1321 atgtactacc ttttgcacct tcacctaaaa gaacacagtt tggatatttc atcgttaact
     1381 tagaacctaa gttaccatct acccattcca tatttccgtt ttcataaaca aaagtacgtt
     1441 ttgtaactaa attgtataca ttgttcgccc agttttgaat cgtagtataa cgaacgtgcg
     1501 catctttatg cacaatgatt tccacaacag cagagtgtaa agaactagtt gtataaactg
     1561 gtgcagtaca accttctacg taatgtacag aagcaccttc atcagcaatg attaatgtac
     1621 gttcaaattg acccatgttc tcagagttaa tacggaaata agcttgtagt ggcgtatcta
     1681 gtttgatatt tttaggtaca taaatgaacg aaccacctga ccatactgct gagtttaacg
     1741 ccgcaaattt gttatctgct gcaggtacta cagaagcaaa gtattttttg aataattctt
     1801 cattttcttg taaagcacta tctgtatctt taaagataat acctttttct tcaagttctt
     1861 tttccatatt atggtaaaca acttcagatt catattgagc agaaacacca gctaaatatt
     1921 tttgttcagc ttcaggaatt cctaatttat cgaaagttct tttaatttct tctggcactt
     1981 catcccatga acgttcagct tgttctgaag gctttacata gtaagtaatg tcatcgaaat
     2041 tcaattctga taagtcgcca ccccattgag gcattggcat tttataaaac aattttaatg
     2101 atttaagacg gaaatctaac atccattccg gctcattttt catgttagaa atttctctaa
     2161 cgatattctc agttaaacca cgttctgatc tgaaaatgga cacatcatcg tcgtggaatc
     2221 catatttata atccccaaca tcaggtgctt ttttagccat ttcaatcact ccttaaaaat
     2281 atatttacaa cggcgtgcgt aagtttttaa ttcatgatgt aaaccatatt ataacaatga
     2341 catgacatct tataaaaatt tttatacttt tatatgtcta atatcaaaat tatctatgat
     2401 taacagcatt ctattcttct tcagtcgtac cttctgcttt accttcttta gcaacagtac
     2461 ctttttccaa tgctttccaa gctaatgtgg cacatttaat acgagctggg aattgagata
     2521 caccttgcaa tgcttcaata tctcccattt cttctgtaat cacatagtct tcaccaagca
     2581 tcattttcgt aaattcttgg ctcatttgca ttgcttctcc aagtgaatga cctttaacag
     2641 cttgtgtcat catcgatgca cttgccattg aaatcgaaca accttcacct tcaaacttag
     2701 catcttttat aatgccgtct tctatatcaa atgttagtcg tatacggtca ccgcatgtcg
     2761 ggttattcat atctactgtc atagacccgt tatctaatac acctttattt ctaggatttt
     2821 tataatgatc cataatgaca gatctatata attgatctag attattaaaa ttcataagag
     2881 aaaaactcct tcgtttgttt caaggcattt attaactgat caacgtcttc tttcgtgttg
     2941 tatatataaa aactcgctct agctgttgaa gacacattta accatttcat taacggttgc
     3001 gcacaatgat gcccagctct aaccgctaca ccttctgtat ctacggctgt agcaacatcg
     3061 tgtggatgta catcttgtaa attaaacgtt attacacctg cacgacgatc ctttggcggg
     3121 ccataaattt caattccttc aattgcagac atttgctcat aagcatatat cgttaattct
     3181 tgttcatatt tatgaattgc atcaaaacct atgcgttcta aatagcgaat agcttctgca
     3241 agcccaattg cttgagcaat taatggagta cccgcctcaa atttagtagg taaatcagcc
     3301 catgttgcat catacttact tacaaaatca atcatgtcgc caccgaactc aatcggttcc
     3361 attttttgta gtaactcacg tttaccaaat aatacgccaa tacctgttgg tccaagcatt
     3421 ttatgaccac taaaactata aaaatcagca ttcatttctt gcatatcaag tttcatatgt
     3481 ggtgctgctt gcgccccatc aacactgata attgcaccat gttgatgagc tatttctgca
     3541 atggttttaa catcattaat tgtaccgagc acattagata tatgtgcaat agcaacgatc
     3601 tttgttttat cattaatcgt ttgcttaata tcctcgatgt ttaattcacc gtcagctgtc
     3661 attggtataa atttcaatgt cgcattttta cgctttgcta actgttgcca aggaacaata
     3721 ttggcatgat gttccatttc agtgacaaca atttcatcgc cctcttcaac atttgcatca
     3781 ccatagctat gtgctacaag gttaatcgac gcagttgttc cgcgtgtaaa aatgatttct
     3841 tcaaaatact tcgcattaat aaaacgacga acggtttcac gggcattttc ataaccatca
     3901 gttgccaatg atcctaatgt atgaacacca cgatgaacgt ttgaattata acgcttgtag
     3961 taatcttcta aaacatttaa cacttgcaca ggcgtttgac ttgtcgctgt tgaatcaaga
     4021 tatgctaaac gtttgccatt gactttttga tctaatatcg gaaaatcctt gattacttca
     4081 ttaacgtcaa atgagtgttc ggccacttca ttcacgacct ttcttaaata aaaatcctaa
     4141 tcatttaaat actgacgttg tattagtctt ataccaatat cgacagtcta tatctattac
     4201 aaacttttat tttcaaaata ttatttagaa actttgcgtt caattacttc tctcaattga
     4261 cgtttaacgt cttcgatagg taattcacgt actactggat ctaagaaacc atgtataaca
     4321 agacgttccg cttctctttg agaaatacca cgactcatta aatagtaaag ttgatctgga
     4381 tcaacacgac ctactgatgc agcatgacca gcttgtacat catcttcatc aattaataaa
     4441 ataggattcg cgtcaccacg agcatgttca gataacatta atacacgtga ttcctgatta
     4501 gcaattgatt tagttccacc atgcttaatg tagccgatac cattaaatac agacgatgca
     4561 tgttctttca taacaccatg tttaaggata taaccatctg tttctttacc atattgtacg
     4621 attttagatg ttagattaat tttttgttcg cctgtaccta caactactga tttaagtgaa
     4681 cttgttgaac gatcaccaaa taaatttgtt gtattatcaa taatttggct accctcattc
     4741 attaaaccta gtgcccaatt aattgaggca tccgcttcag taataccacg tcgaatgata
     4801 tgacctgtaa agcctttatc catatagtcc actgagccat atgtgatatt tgaatttgca
     4861 ccagcaatca cttcagaaat aatatttaat tgatttcctt caccagatgc atttgataag
     4921 taattttcaa catatgtgac ttcggcgctt tcttcagtaa cgatgataac atggttataa
     4981 aagcttgcat tttcgtcgtc gtgcaacaca acgtattgta ctggatgttc tacaactaca
     5041 tttttaggaa cataaacaaa tacgccacca ttaactaatg ccgtgtgtag cgctgtgata
     5101 cgatgttcat ctactgttac tgcatctttc ataaagtact tttgtactaa atcactatgg
     5161 ttcataagag cgtctgctaa accttcaacg ataacgccat ctttcgatgc attatcatca
     5221 acttgtgtgt acgcaatcgt attattatgt tgaattacta agtttttaga atgatctacg
     5281 tcaataattt ctcttactga ctcaggtaat tgtgataaag attgataaac atcacctttt
     5341 acatcgtgtt gtttaaaaga atcaaaatcc cattttctta attttgtttt atcaggtttt
     5401 ggcatttcta aagtttctgt taatttcaaa gcttttttac gtaattctgt catccaagaa
     5461 ggttcattgt gggctttaga ataatcaaca agttgttctt cagaaatgtt caaaatatca
     5521 gttgtcataa ctttttcctc ctacttgatg aaatttacta tttcgtataa atgttcattt
     5581 tcatcatata tagatgaaca tctcatggat actgtattaa taagattatt cagctgaacc
     5641 gaactcttct ttaacccatt catatccttc ttcttcaaga cgttttgcta attctggatc
     5701 accagattta acgactttac cagcatacat tacatgtact ttatcaggag taatgtaatt
     5761 taataatcgt tgatagtgtg taatcattaa tgcaccaaag ttttccccac gcatttggtt
     5821 aataccttta gatacaactt ttaatgcatc gatgtctaac cctgaatcga tttcatctaa
     5881 gattgcaaac ttaggttcta acatcattaa ttgtaagatt tcgttacgtt tcttctctcc
     5941 acctgagaaa ccttcattta aataacgttg tgccatgtct ttatctatgt ctagaaaatc
     6001 catgttttta tctaatttct taataaattg cattaagttg atttcttgtc cttcttcacg
     6061 tttcgcattg attgctgaac gcatgaaatc agcatttgta acacctgtaa tttctgatgg
     6121 atattgcatt gccaagaata atcctgcttt tgctctttca tcaacttcta attctaaaat
     6181 atttacaccg tctaaaagta cttctccttt agttacttca tagcttgggt gtcccataat
     6241 tgcagatgat aaagttgatt tacctgtccc gtttggtccc ataatcgcat gtatttcatc
     6301 agtgttaatt gtcaagttaa caccttttaa gatttcttta tcctcaatag acacatgtag
     6361 gtctttgatt tctaatgttg atgccatttt atattccctc cgtaaaatat aaagttttct
     6421 taactagttt ataataattt taatttgtag tcaaaaaga
//
LOCUS       DALPQQ010000125         6422 bp    DNA     linear   BCT 22-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus strain K18-6-464
            SAMD00233528-rid16434743.denovo.126, whole genome shotgun sequence.
ACCESSION   DALPQQ010000125 DALPQQ010000000
VERSION     DALPQQ010000125.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMD00233528
            Sequence Read Archive: DRR236061
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 6422)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6422)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001543423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001543423.1
            Genome Coverage       :: 77x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/22/2022 17:09:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,811
            CDSs (total)                      :: 2,743
            Genes (coding)                    :: 2,689
            CDSs (with protein)               :: 2,689
            Genes (RNA)                       :: 68
            rRNAs                             :: 2, 4, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 4, 2 (16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 54
            CDSs (without protein)            :: 54
            Pseudo Genes (ambiguous residues) :: 0 of 54
            Pseudo Genes (frameshifted)       :: 27 of 54
            Pseudo Genes (incomplete)         :: 27 of 54
            Pseudo Genes (internal stop)      :: 10 of 54
            Pseudo Genes (multiple problems)  :: 10 of 54
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6422
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMD00233528-rid16434743.denovo.126"
                     /strain="K18-6-464"
                     /db_xref="taxon:1280"
                     /geo_loc_name="Japan: Niigata"
     gene            <1..2053
                     /gene="eap"
                     /locus_tag="O7798_002206"
                     /gene_synonym="map"
     CDS             <1..2053
                     /gene="eap"
                     /locus_tag="O7798_002206"
                     /gene_synonym="map"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000669709.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="extracellular adherence protein Eap/Map"
                     /protein_id="HDC2864424.1"
                     /translation="KFKSLITTTLALGVLASTGANFNNNEASAAAKPLDKSSSSLHHG
                     YSKVHVPYAITVNGTSQNILSSLTFNKNQNISYKDLEDRVKSVLKSDRGISDIDLRLS
                     KQAKYTVYFKNGTKKVIDLKAGIYTADLINTSEIKAININVDTKKQVEDKKKDKANYQ
                     VPYTITVNGTSQNILSNLTFNKNQNISYKDLEDKVKSVLESNRGITDVDLRLSKQEKY
                     TVNFKNGTKKVIDLKSGIYTANLINSSDIKSININVDTKKHIENKAKRNYQVPYSINL
                     NGTSTNILSNLSFSNKPWTNYKNLTSQIKSVLKHDRGISEQDLKYAKKAYYTVYFKNG
                     GKRILQLNSKNYTANLVHAKDVKRIEITVKTGTKAKADRYVPYTIAVNGTSTPILSDL
                     KFTGDPRVGYKDISKKVKSVLKHDRGIGERELKYAKKATYTVHFKNGTKKVININSNI
                     SQLNLLYVQDIKKIDIDVKTGTKAKADSYVPYTIAVNGTSTPILSKLKISNKQLISYK
                     YLNDKVKSVLKSERGISDLDLKFAKQAKYTVYFKNGKKQVVNLKSDIFTPNLFSAKDI
                     KKIDIDVKQYTKSKKINKSNNVKFPVTINKFENIVSNEFVFYNASKITINDLSIKLKS
                     AMANDQGITKHDIGLAERAVYKVYFKNGSSKYVDLKTEYKDERVFKATDIKKVDIELK
                     F"
     gene            complement(2377..3663)
                     /locus_tag="O7798_002207"
     CDS             complement(2377..3663)
                     /locus_tag="O7798_002207"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500648.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class I/II-fold pyridoxal
                     phosphate-dependent enzyme"
                     /protein_id="HDC2864425.1"
                     /translation="MNPLAQSLNEQLQQSNATAFTMLSDLGQNMFYPKGILSQSAEAK
                     STTYNATIGMATNKDGKMFASSLDAMFNDLTPDEIFPYAPPQGIEELRDLWQQKMLRD
                     NPELSIDNMSLPIVTNALTHGLSLVGDLFVNQGDTILLPEHNWGNYKLVFNTRNGANL
                     QTYPIFDKDGHYTTDSLVEALQSYNKDKVIMILNYPNNPTGYTPTHKEVTTIVDAIKA
                     LADKGTKVIAVVDDAYYGLFYEDVYTQSLFTALSNLNSNAILPVRLDGATKEFFAWGF
                     RVGFMTFGTSDQTTKEVLEAKVKGLIRSNISSGPLPTQSAVKHVLKNNKQFDKEIEQN
                     IQTLKERYEVTKEVVYADQYHSHWQAYDFNSGYFMAIKVHDVDPEELRKHLIEKYSIG
                     VIALNATDIRIAFSCVEKEDIPHVFDSIAKAIDDLR"
     gene            3863..3961
                     /locus_tag="O7798_002208"
     CDS             3863..3961
                     /locus_tag="O7798_002208"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500647.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDC2864426.1"
                     /translation="MMWWQEGMMTLITGGLLIIFRLWLELKWKNKK"
     gene            4204..4380
                     /locus_tag="O7798_002209"
     CDS             4204..4380
                     /locus_tag="O7798_002209"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500646.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDC2864427.1"
                     /translation="MKHLTKIFVVLAIILFIIGYYLQATNHESQGIKLLLAAIMFMIC
                     AFISRSNDRRKNSK"
     gene            4639..5019
                     /locus_tag="O7798_002210"
     CDS             4639..5019
                     /locus_tag="O7798_002210"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500645.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GntR family transcriptional regulator"
                     /protein_id="HDC2864428.1"
                     /translation="MKIILKNNSDFPIYEQIKQQVKQNILKGHVAPGEHLPSMRELAK
                     DLQVSLITTKRAYEDLEKDGFVTTIRGKGTFVKEQDSSILKEKQFFTIENLVKELVNE
                     AQAIEMSLEELQDILTFIYEEESS"
     gene            5016..5912
                     /gene="pmtA"
                     /locus_tag="O7798_002211"
     CDS             5016..5912
                     /gene="pmtA"
                     /locus_tag="O7798_002211"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500644.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phenol-soluble modulin export ABC transporter
                     ATP-binding protein PmtA"
                     /protein_id="HDC2864429.1"
                     /translation="MNAIELSNVNYSSDQFNLKNISFKVPQGFVTGFIGRNGAGKTTI
                     IRLIMDLYQPQTGVIRVLEEDMALNPIELKNRIGFVYSENYFNERWTTKQLEKMIAPF
                     YRKWDHQVFEFYLEKFDLPINKSIKTFSTGMKMKLSLAVAFSHHAELYIFDEPTSGLD
                     PLARNELLEIIQQELIDENKTIFMSTHIISDLEKIADYIIHLSDGEVILNGSKEQLLQ
                     RYQVVSGAIEDLDDELASLLIYEEHKRTGFIGLTEHAQVFKEILGHKVNITTPSIENL
                     MVYLEKRKPKYHENIKLMEEGF"
     gene            5913..>6422
                     /gene="pmtB"
                     /locus_tag="O7798_002212"
     CDS             5913..>6422
                     /gene="pmtB"
                     /locus_tag="O7798_002212"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500643.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phenol-soluble modulin export ABC transporter
                     permease subunit PmtB"
                     /protein_id="HDC2864430.1"
                     /translation="MKALLIRNFKLRRYTLIIYVLLLTLYPFYIMLDSTKFFYLLQSF
                     ISPTILIIWILDAGHLFRLNRRLGGNDSYYFYMSLPVSKKQLLNANYITCIVLTLIGT
                     LVISLYAYEADVIEPNSIYFSTAYAFVISNFLSIPIAFSQFTELRRVKVPYGIYVFTI
                     IILVPFLFSI"
BASE COUNT         2373 a          854 c         1056 g         2139 t
ORIGIN      
        1 gaaatttaag tcattgatta caacaacttt agcattaggt gttttagcat caacaggtgc
       61 aaactttaat aataatgaag cgtctgccgc agctaagcca ttagataaat catcaagttc
      121 gttacaccat ggatattcta aagtccatgt tccatatgca atcactgtga acggtacaag
      181 ccaaaatatt ttatcaagct taacatttaa taagaatcaa aatattagtt ataaagattt
      241 agaggataga gttaaatcag ttttaaaatc agacagaggt attagtgata tagatttaag
      301 actatcgaag caagcgaaat atactgttta ctttaaaaat ggaacaaaga aagttatcga
      361 tttgaaagca ggtatttaca cagctgattt aattaataca agtgaaatta aagctattaa
      421 tattaacgta gatactaaaa agcaagttga agataaaaag aaagataaag caaattacca
      481 agttccatac acaatcactg tgaacggtac aagccaaaat attttatcaa acttaacatt
      541 taataagaat caaaatatta gttacaaaga tttagaggat aaagttaaat cagttttaga
      601 atcaaataga ggtattaccg atgttgattt aagattatcg aagcaagaga aatatacagt
      661 taattttaaa aatggaacga agaaagttat cgatttgaaa tcaggtattt acacagcgaa
      721 tttaataaat tcaagtgata ttaaaagtat caatattaac gtagatacaa aaaaacatat
      781 cgaaaataaa gctaaaagaa actatcaagt tccatattca attaatttaa atggtacatc
      841 tacaaacatt ttatcgaatc tttcattttc aaataaacct tggacaaatt acaaaaattt
      901 aactagtcaa ataaaatcag tactgaagca tgatagaggt attagtgaac aagatttaaa
      961 atatgctaag aaagcttatt atactgttta ttttaaaaat ggtggtaaaa gaatcttaca
     1021 gttgaattca aaaaattaca cagcaaactt agttcatgcg aaagatgtta agagaattga
     1081 aattactgtt aaaacaggaa ctaaagcgaa agcagacaga tatgtaccat acacaattgc
     1141 agtaaatggc acatcaacac caattttatc agatttaaaa tttacaggtg acccacgtgt
     1201 aggctacaaa gatatctcta aaaaagttaa atcagtattg aagcatgata gaggtatcgg
     1261 ggaacgtgaa ttaaaatatg caaaaaaagc aacttacaca gtacatttta aaaatggaac
     1321 gaaaaaagtg attaacataa attcaaatat tagccaactg aatctgcttt atgttcaaga
     1381 tattaaaaag atagatattg atgttaaaac aggaactaaa gcgaaagcgg atagctatgt
     1441 accatataca attgcagtaa atggcacatc aacaccaatt ttatcaaaac ttaaaatttc
     1501 gaataaacaa ttaattagtt acaaatattt aaatgacaaa gtgaaatctg tattaaaaag
     1561 tgaaagaggc atcagtgatc ttgacttaaa atttgcgaaa caagcaaaat atacagtata
     1621 tttcaaaaat ggaaagaaac aagtagtgaa tttaaaatca gacatcttta cacctaattt
     1681 atttagtgcc aaagatatta aaaagattga tattgatgta aaacaataca ctaaatcaaa
     1741 aaaaataaat aaatctaata atgtgaaatt cccagtaaca ataaataaat ttgaaaacat
     1801 agtttcaaat gaatttgtgt tctataatgc aagcaaaatt acaattaatg atttaagtat
     1861 aaaacttaaa tcagcaatgg caaatgatca agggataact aaacatgaca taggacttgc
     1921 tgaacgcgca gtgtataaag tgtattttaa aaatggttcg tcaaaatatg tagacttaaa
     1981 aactgagtat aaagatgaaa gagtatttaa agcaactgac attaaaaagg tagatattga
     2041 acttaaattc taatctttaa ttttataata aggcatctca caatcgtggg gtgcctttta
     2101 catttgtaga gatgtgatgc ttgaatgttt gaagtgattt gccaaaagtt atataaattg
     2161 gttctataat aaatcggact gatagaaaaa gttttttact tttcatctgt ccgatttttt
     2221 gattttgtta ggagagatgt ataaaactaa ttaggtatag tgtttgacaa gttgctgaat
     2281 aaaatatatc ttatgatact ttgaaagaag gaataatttt aaaaataaaa aaccaataat
     2341 ccgagtcata ctcatcagat tattggttga aattaattat cttaagtcat caatcgcttt
     2401 agcaattgaa tcaaatacat gtgggatatc ttctttttct acacagctaa acgcaatacg
     2461 aatatctgtt gcattaagtg caataacacc aattgaatat ttttcaatta aatgtttacg
     2521 aagttcttca gggtcaacat catgaacttt tattgccata aagtatccag agttaaagtc
     2581 ataggcttgc caatgtgaat gatattgatc agcatagaca acttccttag tgacttcata
     2641 gcgttctttt aatgtttgaa tattttgttc gatttcttta tcgaattgtt tattattttt
     2701 taatacatgc ttaacagcgc tttgtgttgg aagaggtcca ctagaaatgt tacttcgtat
     2761 aagacctttt actttggctt ctaatacttc tttagttgtt tgatcagacg ttccaaatgt
     2821 cataaaccca acacggaatc cccatgcgaa aaattctttt gttgcaccat ctaaacgaac
     2881 aggtaatatt gcatttgaat ttaaattaga taatgcagta aataatgatt gagtatacac
     2941 atcttcatag aataaaccat agtatgcgtc atccacaaca gctataactt ttgtaccttt
     3001 atcagctaat gctttaattg catcgacgat ggtagtcact tctttatgcg taggtgtgta
     3061 acctgtcgga ttattaggat aatttaaaat cataatgact ttatctttat tgtatgattg
     3121 taaagcttct acaagtgaat cagtagtata atgcccgtct ttatcaaaga taggatatgt
     3181 ttgaaggttt gcaccatttc tcgtattgaa aacaagtttg taattacccc aattatgctc
     3241 tggtaacaag atagtgtcac cttgatttac aaataaatcg ccaactaaag ataaaccatg
     3301 tgttaatgca ttcgtaacaa ttggtagtga catgttgtcg attgatagct ctggattgtc
     3361 acgcaacatt ttttgttgcc ataaatcacg taattcttcg atgccttgtg gtggcgcata
     3421 agggaatatt tcatctggag ttaaatcatt aaacattgca tctaaagatg atgcaaacat
     3481 ttttccgtct ttgtttgtcg ccatacctat agttgcatta tatgttgtac tctttgcttc
     3541 agcagattga gataaaatgc cttttggata aaacatattt tgacctaagt cagataacat
     3601 tgtaaaggca gttgcatttg actgttgaag ttgttcattt aagctttggg ctaaaggatt
     3661 cattattgct taacctctct ttaaaaaaat tgtatgccta tatattatct tcaattatac
     3721 caaagataaa gtgttgttgg tgaattaacg aataatatgt aaaatctgct gccaaaatac
     3781 gaacatatgt tctgttttta tgttagaata ggtgtaggtc atccttcagt atgatacttt
     3841 agtcgaacgg aggtgtagtg taatgatgtg gtggcaagaa gggatgatga cacttattac
     3901 aggtggctta ctaattattt ttcgactttg gttagaactg aaatggaaaa ataaaaaatg
     3961 atcctacaca cataaataac cccaagtctg ctggtaccag acttggggtt gtgtagtata
     4021 attctgtgga tacacttaaa taatatcatt gaacacaata tatcgcaatc aataatcatt
     4081 ttgattgaat ggttttgttg cgctatttta gttgaaagtg attagtacct tgaacttttg
     4141 aaattcaata acttattaaa aaaatttata tttgttataa tgtcgatgtt gaggtgaaat
     4201 aaattgaaac atctaacaaa aatatttgta gtacttgcaa ttattttatt tattattggt
     4261 tattatttac aagcaactaa tcatgaaagc caaggtataa aattattatt agcagcgatt
     4321 atgtttatga tttgtgcttt tataagtaga agtaatgatc gacgtaaaaa tagtaaatag
     4381 aattgactgt ttaaaacgat tgtttatgtt gacgctacgg ttgtcacgta gagattaaag
     4441 acattcgttt tagcagtctt ttttattgaa gtagacaatg caagattaaa tggtagtgtc
     4501 atttcatttt attcaactgc tagtaataca atactcagtg ttatttctga agactggttg
     4561 ataatgagac atgcatattt acaaaactgt gtatattgtg tatattgtat atatacagaa
     4621 gttgataggg ggacgttgat gaaaataatt ttaaaaaaca atagtgattt tccgatttat
     4681 gaacagatta agcaacaagt aaaacaaaat attttaaagg gacatgttgc tcctggagag
     4741 catttgccgt caatgagaga acttgccaaa gatcttcaag taagtttgat tactaccaaa
     4801 cgtgcttatg aagatttaga gaaagacggt tttgttacaa caattagagg aaaagggacc
     4861 tttgttaagg agcaagatag ttctatttta aaagagaaac aattttttac cattgaaaat
     4921 ttggttaaag aattggttaa tgaagcgcaa gccatcgaaa tgtcacttga ggaactgcag
     4981 gatattttaa cgttcattta tgaggaggaa tcatcatgaa tgccatagaa ttaagtaatg
     5041 ttaattattc aagtgatcag tttaatttaa agaatatctc tttcaaagtt cctcaaggat
     5101 tcgtcactgg ttttattggt agaaatggcg ctggtaaaac cacaataata aggttaatta
     5161 tggatttgta tcaaccacaa actggtgtta ttagagtatt agaagaggat atggctctca
     5221 atccgataga gttaaagaat agaattgggt ttgtttactc tgaaaattat tttaatgaga
     5281 gatggactac gaagcaactt gaaaaaatga ttgccccttt ttatcgtaaa tgggaccatc
     5341 aagtatttga attttatctt gaaaagttcg atttaccaat caataaatca ataaaaacat
     5401 tttcgactgg gatgaaaatg aaattatcac tagcagttgc attttcacat catgctgaat
     5461 tgtatatttt tgatgagcct acttcaggtc ttgatccctt agctagaaat gagctattgg
     5521 agataattca gcaagaatta attgatgaaa ataaaacaat attcatgtcg acacacatta
     5581 tctcagattt agaaaaaata gctgattata tcattcactt aagtgacggt gaagttatct
     5641 taaatggttc aaaagaacaa ctgttacaaa gatatcaagt tgtgagtggt gctattgagg
     5701 accttgatga tgaattagca tctctactta tttatgaaga acataagcgt acgggattta
     5761 taggattaac agaacatgcg caagtattta aagaaatttt aggtcataaa gtgaatatca
     5821 ctacaccttc tattgagaac ttaatggttt atcttgaaaa gagaaaacct aaatatcatg
     5881 aaaacatcaa attgatggaa gaaggttttt aaatgaaggc attgttaatt aggaatttta
     5941 aattacgacg atatacactt atcatctatg ttctattatt aaccttatat cctttttata
     6001 taatgcttga ctcaacaaag ttcttttact tattgcaatc ttttataagt ccaacaatat
     6061 tgattatttg gattttagat gctggtcact tatttagact caatcgtaga ttaggtggta
     6121 atgattcata ttatttttat atgagtttac cagtgtcaaa aaaacaattg cttaatgcca
     6181 actatattac atgcattgtt ttaacattaa ttggaacgct tgttattagt ttatatgctt
     6241 atgaagcaga tgtgattgaa ccaaattcaa tctatttttc aactgcatat gcatttgtca
     6301 tatctaactt cttgtctata ccaattgcat ttagtcaatt tacagaattg cgtagagtca
     6361 aagtgccata tggtatatac gtgtttacta ttatcatttt agttccattt ttattttcaa
     6421 tt
//
LOCUS       DALPQQ010000126         6284 bp    DNA     linear   BCT 22-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus strain K18-6-464
            SAMD00233528-rid16434743.denovo.127, whole genome shotgun sequence.
ACCESSION   DALPQQ010000126 DALPQQ010000000
VERSION     DALPQQ010000126.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMD00233528
            Sequence Read Archive: DRR236061
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 6284)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6284)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001543423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001543423.1
            Genome Coverage       :: 77x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/22/2022 17:09:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,811
            CDSs (total)                      :: 2,743
            Genes (coding)                    :: 2,689
            CDSs (with protein)               :: 2,689
            Genes (RNA)                       :: 68
            rRNAs                             :: 2, 4, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 4, 2 (16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 54
            CDSs (without protein)            :: 54
            Pseudo Genes (ambiguous residues) :: 0 of 54
            Pseudo Genes (frameshifted)       :: 27 of 54
            Pseudo Genes (incomplete)         :: 27 of 54
            Pseudo Genes (internal stop)      :: 10 of 54
            Pseudo Genes (multiple problems)  :: 10 of 54
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6284
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMD00233528-rid16434743.denovo.127"
                     /strain="K18-6-464"
                     /db_xref="taxon:1280"
                     /geo_loc_name="Japan: Niigata"
     gene            complement(<1..2081)
                     /locus_tag="O7798_002213"
     CDS             complement(<1..2081)
                     /locus_tag="O7798_002213"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500471.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HDC2864431.1"
                     /translation="MIIKSLEIYGYGQFVQRKIEFNKNFTEIFGENEAGKSTIQAFIH
                     SILFGFPTKKSKEPRLEPRLGNQYGGKLVLILDDGLEIEVERIKGSAQGDVKVYLPNG
                     AVRDDAWLQKKLNYISKKTYQGIFSFDVLGLQDIHRNLNEKQLQDYLLQAGALGSTEF
                     TSMREVINRKKDELYKKSGKNPIINQQIEQLKQLESQIREEEAKLETYHRLVDDRDKS
                     SRRLENLKHNLNQLSKMHEEKQKEVALHDHSQEWKSLEQQLNIEPITFPEKGVDRYEK
                     ARAHKQSLERDIGLRNERLAQLKEEATQLEPVKQSDIDAFISLNQQENEIKNKEFELT
                     AIEKDIANKQRDKDELQSNIGWSETHHDVDSSEAMKSYVSEQIKNKQEQAAYIKQLER
                     SLEENKIEDNAVHSELDSVEEKIVPEETFEKKKEYSQQVIELNEKENLYSKLKERFEI
                     EQQEKQKRQKLLRTTFILLTLVGIGLTAFSFISNNMLFGIIFAVLTLVFVIGIIMSKS
                     KEVDYSEAITDEIEEIKAQLAILDENYDLDFDLDEQYRIRDHWQQALKNKDILEEKRQ
                     YIEGRLNDAKGRHDELQSTVENVKDELYLSSKISNDLIVDSISTMANIKALDQHISDL
                     NQQRQQLVQELDTFYNHAEAVTKSQFVYFNKLSLFHDVQQWLKSAEDTNEKWRINAEN
                     TKLVTNELNHL"
     gene            complement(2071..3267)
                     /locus_tag="O7798_002214"
     CDS             complement(2071..3267)
                     /locus_tag="O7798_002214"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500472.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="exonuclease SbcCD subunit D"
                     /protein_id="HDC2864432.1"
                     /translation="MVKFIHCSDLHLDSPFKSKSHISPKIFEDVQKSAYESFKNIVDI
                     ALQQDVDFVIIAGDLFDSENRTLRAEIFLKQQFERLQNEQIFVYVCHGNHDPLSSKIS
                     SNWPDNVSVFSNKVETYEAITKSGETIYIHGFSYENRASYENKIDEYPSSQGQKGIHI
                     GVLHGTYSKSSVNERYTEFILEDLNSKLYHYWALGHIHERQQLSDMPVINYSGNIQGR
                     HFNEQGEKGCLLIEGDHLKLKTKFYPTQYIRFEEATIETDKTSKQGLYEVIQNFKEQV
                     REEGKAFYRLTLVINSETLISPQDLLQVEEMITDYEENENQFVYIDELKIQYAQNDES
                     PLVNEFSAELLVDQTVFDKAMSDLYLNPRASKFLDDYGTFDHTALVNRAEEILKAEMR
                     GEQNDN"
     gene            complement(3558..3656)
                     /locus_tag="O7798_002215"
     CDS             complement(3558..3656)
                     /locus_tag="O7798_002215"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500473.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDC2864433.1"
                     /translation="MPFDSLAVLITTEIAFPTEIFEKYQRTLQIKF"
     gene            complement(4039..4383)
                     /locus_tag="O7798_002216"
     CDS             complement(4039..4383)
                     /locus_tag="O7798_002216"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002498160.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YlbF/YmcA family competence regulator"
                     /protein_id="HDC2864434.1"
                     /translation="MAVNLYDYANQLEQALRESEEYKAIKEAFANVKANEESKKLFDE
                     FRETQINFQQKQMQGEEIAEEDLQKAQEQAQAIEKDENISALMNAEQKMSQVFQEINQ
                     IIVKPLDEIYAD"
     gene            complement(4452..5576)
                     /locus_tag="O7798_002217"
     CDS             complement(4452..5576)
                     /locus_tag="O7798_002217"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500475.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF445 domain-containing protein"
                     /protein_id="HDC2864435.1"
                     /translation="MNALFIIIFMIVVGAIIGGITNVIAIRMLFHPFKPYYIFKFRVP
                     FTPGLIPKRREEIATKIGQVIEEHLLTETLINEKLKSEQSQQAIESMIQQQLQKLTKD
                     QLSIKQITSQIDIDLEQVLQTNGNQYIESQLNNYYTKHQNQTIASLLPNQLVTFLNQH
                     VDNATDLLCDRARNYLSSAKGTQDINDMLDTFFNEKGKLIGMLQMFMTKESIADRIQQ
                     ELIRLTSHPKARTIVTSLITNEYQTFKDKPLNELLDASQFNEIAENLSVYVTTYASKQ
                     ANKPVVTLMPQFVDYLEGQLSSKLANLIIEKLSIHLSTIMKKVDLRGLIEEQINTFDL
                     DYIEKLIIEIANKELKLIMSLGFILGGIIGFFQGLVAIFV"
     gene            complement(5755..6219)
                     /locus_tag="O7798_002218"
     CDS             complement(5755..6219)
                     /locus_tag="O7798_002218"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500476.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HDC2864436.1"
                     /translation="MDRQSFTDLIQTKFKMVRIEAGYTQDTMAQTIGLSKKTLVQIEK
                     ERVLPNWTTCISICALFRDSEVLNSTFGCDPLEIVQTISRNHCAYPNHAPTSDIYWNN
                     IETRNGYILQSNKVSNIYRVLNPDNQPIFGTSKMREAETYFNRNAKEELVHI"
BASE COUNT         1895 a         1083 c          857 g         2449 t
ORIGIN      
        1 tttaaatgat ttaattcatt tgtaacaagt ttggtatttt cagcattaat acgccatttt
       61 tcattcgtgt cttcagctga tttcaaccat tgttgcacat cgtggaataa agataatttg
      121 ttgaaataaa caaattgtga ttttgtaaca gcttcagcat gattgtagaa tgtatctaat
      181 tcttgaacca attgctggcg ttgttgattt aaatcactga tatgttgatc taatgcttta
      241 atattcgcca ttgtagaaat actatcaaca attaaatcat ttgaaatttt agatgataag
      301 tataattcat ccttaacgtt ctcaactgtc gattgtaatt catcatgacg ccctttcgca
      361 tcatttaaac gaccttcaat atactgacgt ttctcttcta aaatatcttt atttttcaaa
      421 gcttgttgcc agtgatcacg aatgcgatat tgctcatcaa gatcaaaatc taagtcataa
      481 ttttcatcta aaatggctag ttgtgcttta atttcttcga tttcatctgt gatggcctcg
      541 ctataatcta cttcttttga tttagacatg atgataccga taacaaatac taaagttaat
      601 actgcgaaaa taataccaaa caacatgttg tttgaaataa atgagaaggc agttaaacca
      661 atacctacta atgttaaaag aataaacgtt gttcgtaaca atttttgacg tttttgtttt
      721 tcttgttgct caatttcgaa acgttctttc aatttgctat acaagttctc tttttcgttt
      781 aattcaatga cttgttgtga gtattctttt ttcttttcaa aagtctcttc aggaactatt
      841 ttttcttcaa cagaatctag ttcgctatga accgcattat cttcgatttt attttcttct
      901 aaactacgtt ctaattgttt aatgtatgca gcttgttctt gtttattctt gatttgctca
      961 ctgacataac ttttcattgc ctctgaacta tctacgtcat gatgcgtttc agaccaacca
     1021 atatttgatt gcaattcatc tttatcacgt tgtttattcg caatatcctt ttcgattgca
     1081 gtaagttcaa attctttatt tttaatttca ttttcttgtt gattcaaact aatgaaggcg
     1141 tcaatatcag attgtttaac tggctctaat tgagtcgctt cttctttaag ttgagctaaa
     1201 cgctcatttc ttaaaccaat atctctttct aacgattgct tatgcgctcg tgctttttcg
     1261 taacgatcca cacctttttc tgggaatgtg attggctcaa tatttaactg ttgttctaga
     1321 gacttccatt cttgtgaatg atcatgtaaa gcaacctctt tttgtttttc ttcatgcatt
     1381 tttgataatt gatttaaatt atgctttaaa ttctctaatc gacgtgatga tttatctcga
     1441 tcatctacta agcgatgata tgtttctagc tttgcttctt cttcacgaat ttgactttct
     1501 agttgtttta attgctcaat ttgttgatta atgatcggat ttttacctga ttttttatat
     1561 aattcatctt ttttacgatt aatcacttcg cgcattgacg tgaattcagt tgatcctaaa
     1621 gcccctgctt gtaataaata atcttgcaat tgtttttcat ttagatttct atgaatgtct
     1681 tgaagcccta gtacatcaaa tgaaaagata ccttgatatg tctttttaga aatataatta
     1741 agtttctttt gtaaccaagc atcatcacgc acagcaccat taggtaaata tactttcaca
     1801 tcaccttgag cactgccttt aattcgttca acttcaatct ctaagccatc atcaagaata
     1861 agtactaatt taccaccgta ttggttacct agacgtggtt ctagtcttgg ctctttagac
     1921 tttttagttg gaaatccaaa taatatcgaa tggatgaatg cttgaatcgt cgatttaccc
     1981 gcttcatttt caccaaaaat ttcagtgaag tttttattaa attcaatttt acgttgaaca
     2041 aattgaccgt aaccataaat ttcaagtgat ttaattatca ttttgttcac ctctcatttc
     2101 agcttttaat atttcttcag cacgattaac taatgctgta tggtcgaatg ttccataatc
     2161 gtctaggaac ttagatgccc ttggatttaa atataaatct gacatcgctt tatcaaaaac
     2221 agtttgatcg actaataatt ccgctgaaaa ttcattaact aaaggtgact catcattttg
     2281 tgcatattgt atttttaact catcaatata tacaaattga ttttcgtttt cttcataatc
     2341 tgtaatcatt tcttcaactt gtaataaatc ttgaggtgaa attaatgtct cactattaat
     2401 aacaagcgtt aaacgataaa aggcttttcc ttcttctctc acttgttctt taaagttttg
     2461 aatgacctcg tataaacctt gcttagatgt cttatccgtt tcaatagttg cttcttcaaa
     2521 tctaatatac tgtgtaggat aaaatttagt ctttaatttt aagtggtcac cctcgattaa
     2581 taagcaacct ttttcacctt gctcattaaa atgtctacct tgaatattac ctgaatagtt
     2641 aattacaggc atatcactta attgttgacg ttcatgtata tgacctaaag cccaataatg
     2701 atacaattta ctgtttaaat cttctaaaat gaactcggta tatctttcgt taactgaaga
     2761 tttactatac gtaccatgca agacaccaat atgtatgcct ttttggcctt gacttgatgg
     2821 atattcatca atcttgttct cataacttgc tctattttca taactaaatc cgtgaatata
     2881 aattgtttca ccagatttag taattgcttc atacgtctca actttatttg aaaatacaga
     2941 aacattatct ggccagtttg atgaaatctt tgatgataaa ggatcgtgat taccatgaca
     3001 aacataaaca aagatttgtt cattttgtaa acgttcaaat tgctgtttta agaaaatttc
     3061 agcacgtaat gttctgtttt cactatcaaa taaatcaccc gcgataatta caaaatcaac
     3121 atcttgttgt aatgcaatat ctacaatatt tttaaaactt tcataagcac ttttttgaac
     3181 atcctcaaaa attttagggc ttatatgact cttagatttg aaaggactat ctaaatgtaa
     3241 atccgaacaa tgaataaatt taaccataca tccatatctc cttaattaaa ggttctaaca
     3301 tcaattttgc aaaatccaac tatacaaagc attctaatca ctatattcat acttataggt
     3361 gtagtgattc attagctgat ttattaaaac cagtcgccat ttttatttcg ttaaaaaact
     3421 attatctaca caataataaa gtgctttagt caaatcgtga tgttttattt attaacaagt
     3481 ttattatttc ttcattttac cataatacgc ttcatatcgt cgatgaacat atgaaattga
     3541 gacacattta taacagttta aaattttatt tgtagcgtac gttgatattt ttcaaaaatt
     3601 tcagtcggaa atgcaatttc cgtagttatt aacaccgcta gtgaatcaaa tggcacatta
     3661 aagatttaca tgattactct actagatttg ctcggcagta atgaccaatt agaaactaaa
     3721 tgtcaaaact atcattgcac ttaatacgcc aaacattttc aggccgttct taatgagtca
     3781 ttaaaagtga aacgcttttc catcagtccg atacatgacc gaactaatag tattatgttg
     3841 aaaactttac acttcaaaat gcaaaaagga agttaggaca cgtttactag cctaacttcc
     3901 gttactgaat gcatctgccc aatttgacag agagcctcta acttccgtta tcaaaactaa
     3961 aaaaactacc cacaaagtct cggactctgt cggcagtcta ttcctctatt taaaggattg
     4021 aaaaatatta ttttaatatt agtcagcgta aatttcgtct aatggtttaa cgataatttg
     4081 gttgatttct tggaatactt gactcatttt ttgttcagca ttcattaatg cagagatgtt
     4141 ttcatctttt tcaattgctt gcgcttgttc ttgcgctttt tgtaaatctt cttcagcaat
     4201 ttcttcacct tgcatttgtt tttgttggaa gttaatttga gtttcacgga actcgtcgaa
     4261 taacttttta gattcttcgt tagcttttac attagcgaat gcttctttga ttgctttgta
     4321 ttcttcgctt tctcttaaag cttgttctaa ttgatttgca taatcatata aatttactgc
     4381 catggttata gcactccttt gttgtgatgt ttattaaaac gttcgatatt actttaccac
     4441 atctcgcttt tttagacaaa gattgcaacc aaaccttgga aaaatccaat aataccacct
     4501 aaaatgaaac ctaatgacat aatcaacttt agttctttgt tagcaatttc tataattaat
     4561 ttttcaatat aatctaagtc aaacgtatta atttgttctt caattaatcc tcgtaaatcc
     4621 acttttttca taattgtaga taagtgaatc gataattttt caatgattaa atttgctaat
     4681 ttgctagaga gttgaccttc taaataatca acgaattgag gcattaacgt aaccactggc
     4741 ttattcgctt gtttgcttgc atatgttgtt acatacactg atagattttc agcgatttca
     4801 ttaaactgcg atgcatctaa cagttcattc aatggtttat ctttaaaagt ttgatattca
     4861 ttggtaatta acgatgtcac aattgttctt gctttaggat gagatgttaa acgtataagt
     4921 tcttgttgaa tgcgatctgc aatactctct tttgtcataa acatttgcaa cataccaatt
     4981 aacttacctt tctcattgaa aaaagtatcc aacatatcat taatatcttg tgtgcctttt
     5041 gcagatgata aataattcct tgcacgatca cataataagt ctgttgcgtt atctacatgc
     5101 tgatttaaaa atgttacaag ttgatttggc aataaagatg ctattgtttg gttttgatgc
     5161 tttgtataat aattattcaa ttgtgattca atatattgat ttccattagt ttgtaatact
     5221 tgttctaaat caatatcgat ttgagaagta atttgtttta ttgacaattg atctttcgtc
     5281 aacttttgta actgctgttg aatcatagat tctattgctt gctgtgattg ctcgcttttc
     5341 aatttttcat taattaaagt ttctgtaagc aaatgctctt caatcacttg gccaatttta
     5401 gttgcaattt cttcgcgtct tttcggtatt aaacctggtg taaatgggac tctaaattta
     5461 aatatatagt atggtttaaa ggggtgaaac agcattctaa ttgcaattac attagtaatg
     5521 ccaccaatta tcgcccctac tacaatcata aatatgataa taaatagtgc attcataatt
     5581 ttgactcctt tgtgacaaca tagttattca ttataccact atttttattt tttaattcat
     5641 taatcatttc actttctgct caatttatta ttagtttaca tacaaaaagc gatgcctcac
     5701 ctctcgaaac aggtgtgtta catcgctttt attatttatt aaaagtatat aggcctagat
     5761 atgtactaat tcttctttag catttctgtt aaagtatgtt tcagcttctc tcattttaga
     5821 agtaccgaaa attggttggt tatctggatt taatacacga taaatattgc ttactttgtt
     5881 actttgtaaa atgtacccat tacgagtctc aatgttattc caataaatat cacttgttgg
     5941 tgcatggttt ggatatgcac agtgatttct tgaaattgtt tgaacgattt ctaatggatc
     6001 acagccaaat gtactgttta atacttcaga gtctctgaat aatgcacaaa ttgaaataca
     6061 agttgtccag tttggtaata ctctctcttt ttcgatttgt actaaagtct ttttagaaag
     6121 tccaattgtt tgcgccatag tatcttgcgt ataaccagcc tctatacgaa ccattttaaa
     6181 ttttgtttga attaaatctg taaaactctg tctatccatt ctgttatcta cctttctgtt
     6241 tggggaattt tatccggaca caagaaattg caataataca catt
//
LOCUS       DALPQQ010000127         6211 bp    DNA     linear   BCT 22-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus strain K18-6-464
            SAMD00233528-rid16434743.denovo.128, whole genome shotgun sequence.
ACCESSION   DALPQQ010000127 DALPQQ010000000
VERSION     DALPQQ010000127.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMD00233528
            Sequence Read Archive: DRR236061
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 6211)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6211)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001543423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001543423.1
            Genome Coverage       :: 77x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/22/2022 17:09:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,811
            CDSs (total)                      :: 2,743
            Genes (coding)                    :: 2,689
            CDSs (with protein)               :: 2,689
            Genes (RNA)                       :: 68
            rRNAs                             :: 2, 4, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 4, 2 (16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 54
            CDSs (without protein)            :: 54
            Pseudo Genes (ambiguous residues) :: 0 of 54
            Pseudo Genes (frameshifted)       :: 27 of 54
            Pseudo Genes (incomplete)         :: 27 of 54
            Pseudo Genes (internal stop)      :: 10 of 54
            Pseudo Genes (multiple problems)  :: 10 of 54
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6211
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMD00233528-rid16434743.denovo.128"
                     /strain="K18-6-464"
                     /db_xref="taxon:1280"
                     /geo_loc_name="Japan: Niigata"
     gene            complement(125..778)
                     /locus_tag="O7798_002219"
     CDS             complement(125..778)
                     /locus_tag="O7798_002219"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499053.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L25/general stress protein
                     Ctc"
                     /protein_id="HDC2864437.1"
                     /translation="MASLKSIIRQGKQTRSDLKQLRKSGKVPAVVYGYGTKNVSVKVD
                     EVEFIKVIREVGRNGVIELGVGSKTIKVMVADYQFDPLKNQITHIDFLAINMSEERTV
                     EVPVQLVGEAVGAKEGGVVEQPLFNLEVTATPDNIPEAIEVDITELNINDSLTVADVK
                     VTGDFKIENDSAESVVTVVAPTEEPTEEEIEAMEGEQQTEEPEVVGESKEDEEKTEE"
     gene            complement(928..1893)
                     /locus_tag="O7798_002220"
     CDS             complement(928..1893)
                     /locus_tag="O7798_002220"
                     /EC_number="2.7.6.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499051.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribose-phosphate diphosphokinase"
                     /protein_id="HDC2864438.1"
                     /translation="MLNNEYKNSSLKIFSLKGNEALAQEVADQVGIELGKCSVKRFSD
                     GEIQINIEESIRGCDVFIIQPTSYPVNLHLMELLIMIDACKRASAATINIVVPYYGYA
                     RQDRKARSREPITAKLVANLIETAGATRMIALDLHAPQIQGFFDIPIDHLMGVPILAK
                     HFKDDPNINPEECVVVSPDHGGVTRARKLADILKTPIAIIDKRRPRPNVAEVMNIVGE
                     IEGRTAIIIDDIIDTAGTITLAAQALKDKGAKEVYACCTHPVLSGPAKERIENSAIKE
                     LIVTNSIHLDEDRKPSNTKELSVAGLIAQAIIRVYERESVSVLFD"
     gene            complement(2040..3392)
                     /gene="glmU"
                     /locus_tag="O7798_002221"
     CDS             complement(2040..3392)
                     /gene="glmU"
                     /locus_tag="O7798_002221"
                     /EC_number="2.3.1.157"
                     /EC_number="2.7.7.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499050.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional UDP-N-acetylglucosamine
                     diphosphorylase/glucosamine-1-phosphate
                     N-acetyltransferase GlmU"
                     /protein_id="HDC2864439.1"
                     /translation="MRRHAIILAAGKGTRMKSKKYKVLHEVAGKPMVEHVLESVKGSG
                     VDQVVTIVGHGAESVKGHLGERSLYSFQEEQLGTAHAVQMAKSHLEDKEGTTIVVCGD
                     TPLITKETLETLIAHHEDANAQATVLSASIQQPYGYGRIVRNASGRLERIVEEKDATQ
                     AEKDINEISSGIFAFNNKTLFEKLTQVKNDNAQGEYYLPDVLSLILNDGGIVEVYRTN
                     DVEEIMGVNDRVMLSQAEKAMQRRTNHYHMLNGVTIIDPDSTYIGPDVTIGSDTVIEP
                     GVRINGRTEIGEDVVIGQYSEINNSTIENGACIQQSVVNDASVGANTKVGPFAQLRPG
                     AQLGADVKVGNFVEIKKADLKDGAKVSHLSYIGDAVIGERTNIGCGTITVNYDGENKF
                     KTIVGKDSFVGCNVNLVAPVTIGDDVLVAAGSTITDDVPNDSLAVARARQTTKEGYRK
                     "
     gene            complement(3415..3546)
                     /locus_tag="O7798_002222"
     CDS             complement(3415..3546)
                     /locus_tag="O7798_002222"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499049.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDC2864440.1"
                     /translation="MRLNDARIFEVRKKLFLKLQRIKNNAFYMLKEYCRLNYNNDEV"
     gene            complement(3736..4038)
                     /gene="spoVG"
                     /locus_tag="O7798_002223"
     CDS             complement(3736..4038)
                     /gene="spoVG"
                     /locus_tag="O7798_002223"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499048.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="septation regulator SpoVG"
                     /protein_id="HDC2864441.1"
                     /translation="MKVTDVRLRKIQTDGRMKALVSITLDEAFVIHDLRVIEGNSGLF
                     VAMPSKRTPDGEFRDIAHPINSDMRQEIQDAVMKVYDETDEVVPDKNATSEDSEEA"
     gene            complement(4108..4488)
                     /locus_tag="O7798_002224"
     CDS             complement(4108..4488)
                     /locus_tag="O7798_002224"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499047.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RidA family protein"
                     /protein_id="HDC2864442.1"
                     /translation="MKIINTTRLPEALGPYSHATVVNGMVYTSGQIPLNIDGHIVSAD
                     VQAQTKQVLENLKVVLEEAGSDLNSVAKATIFIKDMNDFQKINEVYGQYFNEHKPARS
                     CVEVARLPKDVKVEIELVSKIKEL"
     gene            complement(4505..5329)
                     /gene="purR"
                     /locus_tag="O7798_002225"
     CDS             complement(4505..5329)
                     /gene="purR"
                     /locus_tag="O7798_002225"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499046.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pur operon repressor"
                     /protein_id="HDC2864443.1"
                     /translation="MRYKRSERIVFMTQYLMNHPNKLIPLTFFVKKFKQAKSSISEDV
                     QIIKNTFQKEKLGTVITTAGASGGVTYKPMMSKEEATEVVNEVITLLEEKERLLPGGY
                     LFLSDLVGNPSLLNKVGKLIASIYMEEKLDAVVTIATKGISLANAVANILNLPVVVIR
                     KDNKVTEGSTVSINYVSGSSRKIETMVLSKRTLAENSNVLVVDDFMRAGGSINGVMNL
                     MNEFKAHVKGVSVLVESKEVKQRLIEDYTSLVKLSDVDEYNQEFNVEPGNSLSKFS"
     gene            complement(5343..6191)
                     /locus_tag="O7798_002226"
     CDS             complement(5343..6191)
                     /locus_tag="O7798_002226"
                     /EC_number="2.7.1.148"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499045.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-(cytidine
                     5'-diphospho)-2-C-methyl-D-erythritol kinase"
                     /protein_id="HDC2864444.1"
                     /translation="MIYETAPAKINFTLDTLFKRNDGYHEIEMIMTTVDLNDRLTFHK
                     RKDRKIVVEIEHNYVPSNHKNLAYRAAQLFIEQYQLKQGVTISIDKEIPVSAGLAGGS
                     ADAAATLRGLNRLFDIGASLEELALLGSKIGTDIPFCIYNKTALCTGRGEKIEFLNKP
                     PSAWVILAKPNLGISSPDIFKLINLDKRYDVHTKMCYEALENRDYQQLCQSLSNRLEP
                     ISVSKHPQIDKLKNNMLKSGADGALMSGSGPTVYGLARKESQAKNIYNAVNGCCNEVY
                     LVRLLG"
BASE COUNT         1833 a         1286 c          875 g         2217 t
ORIGIN      
        1 ctttagtaca aagtaataaa gtttaattaa gctttataat aacacaaaaa gcaccatgct
       61 tatattaaaa taagcacagt gcttgttaaa caaagtataa aaactttaat gtaacagatt
      121 aaaattactc ttcagttttt tcttcgtctt ctttgctttc gccaacaact tctggttctt
      181 cagtttgttg ttcgccttcc atagcttcga tttcttcttc agttggttct tcagttggag
      241 caactactgt tactactgat tcagctgaat cgttttcgat tttgaagtcg ccagttactt
      301 taacatcagc aacagttaag ctgtcgttaa tgtttaattc agtaatgtct acttcgattg
      361 cttctggaat attgtctgga gtagcagtta cttctaagtt gaataatggt tgttcaacta
      421 cgccgccttc tttagcgcct actgcttcac caactaattg aactggtact tcaacagtac
      481 gttcttcact catattgatt gctaagaagt caatgtgagt aatttggttt ttaagtggat
      541 cgaattggta gtctgcaacc ataactttga tagttttaga accaacgcct aattcgataa
      601 caccgttacg acctacttca cggataactt tgatgaattc tacttcatca actttaactg
      661 acacgttttt agtaccgtaa ccgtatacta ctgctggtac tttaccagat tttcttaatt
      721 gtttaagatc tgaacgtgtt tgtttacctt gacggatgat tgactttaat gaagccattc
      781 tcatttccac ctttcatttt tgctcaaaac gagcacctca cttacccatc aacatcatcg
      841 ttgcttgcaa gtgtttattt attcgtataa tcacgaacga aactattata cacgtttgga
      901 atatgttcgt caaacgcctt ttaaatatta gtcaaataat acgctaactg attctctttc
      961 gtatacacga atgatagctt gtgcgattaa accagcaaca gataattctt tagtgttaga
     1021 tggtttgcga tcttcatcta aatgaattga gtttgttacg attaattctt ttatagcaga
     1081 attttcgata cgttctttag ccggtcctga taaaacaggg tgtgtacaac aagcatatac
     1141 ttctttagca cctttatctt ttaatgcttg tgcagctaaa gtgattgtac ctgctgtatc
     1201 aataatatcg tcaataataa ttgccgtacg tccttcaatc tcaccaacaa tgttcatcac
     1261 ttcagcaaca tttggtctag gacgacgttt atctataatt gcaattggag tttttaaaat
     1321 gtcagctaat ttacgtgcac gtgtaacgcc gccatggtct ggtgaaacaa cgacacattc
     1381 ttctgggtta atattcggat catctttgaa atgtttagca agaattggca cacccattaa
     1441 gtggtcaatt ggaatatcaa agaatccttg aatttgtggt gcatgtaagt ctaacgcaat
     1501 catacgagtt gcgccagctg tttcgattaa gtttgcaact aatttagcag tgattggctc
     1561 acggctacgg gcttttctat cttgtcttgc atatccataa tatggcacta caatattgat
     1621 tgttgctgca gaagcacgtt tacaagcatc aatcataatt aataattcca ttaaatgtag
     1681 attcacagga tatgatgttg gttgaataat aaatacgtca caaccacgaa tactctcttc
     1741 gatattaatt tgaatttctc catcactaaa acgtttaact gaacatttac ctagttcaat
     1801 tcctacttgg tcagcaactt cttgcgctaa tgcttcgttt cctttcaatg aaaaaatctt
     1861 taatgacgaa ttcttatatt cattatttaa catttatagt cctccaatta tttacttacg
     1921 caattactat tatatataaa atgtaactcc attactatgc gaatcattaa atcataaaga
     1981 ttacattaat attacatagg attatccttt tatcctagcc attttaaata cgtaaatgat
     2041 tatttcctat atccttcttt tgttgtttgt cttgctcttg ccacagctaa actgtcattt
     2101 ggtacgtcat ctgtgattgt ggaaccagct gccaccaata catcatcacc aattgttaca
     2161 ggtgctacta aattaacatt gcaacctaca aatgaatctt tgccgacgat agttttaaat
     2221 ttattttcac catcatagtt aactgtaatc gttccgcaac caatattagt acgttcgcca
     2281 attacagcat cgccaatata acttaaatgt gaaaccttgg caccatcttt aagatctgct
     2341 tttttaattt ctacaaaatt tccaacctta acatctgcac ctaattgcgc gcctggtctc
     2401 aattgcgcaa acggtccgac cttagtattc gctcctacgc tagcatcatt aacaacagac
     2461 tgttgaatac atgcaccatt ttcaatcgta ctattgttaa tttcagagta ctgaccaata
     2521 acaacatctt cgccaatttc tgtacgacca ttaattcgta cgcctggttc aatgactgta
     2581 tcactaccaa ttgtaacgtc tggaccaata taagtgctgt caggatcgat gattgtcaca
     2641 ccatttagca tgtgataatg attcgtacga cgttgcatcg ccttctcagc ctgactaagc
     2701 attacacgat catttacacc catgatttct tcaacatcat tggtacgata gacttctacg
     2761 atgccgccat catttaaaat taacgacaat acatcaggga ggtaatattc accttgcgca
     2821 ttatcatttt tcacttgtgt taatttttca aacaacgttt tattattaaa cgcaaaaata
     2881 cctgaactaa tttcattaat atccttttca gcttgcgttg catctttctc ttcaactatg
     2941 cgttctaaac gacctgacgc atttcgaacg attcttccgt atccatatgg ttgttgaatc
     3001 gatgcagata atacagttgc ttgagcatta gcatcctcgt gatgcgcaat caatgtttct
     3061 aatgtttcct ttgtgatgag cggtgtgtca ccacatacaa cgattgtcgt accttccttg
     3121 tcttctaagt gtgatttcgc catttgcact gcatgcgcag taccgagttg ttcctcttga
     3181 aaactgtata aagaacgctc gcctaaatgt ccttttacac tttcagcacc atgtcctacg
     3241 atggttacaa cttgatcgac accagagcct ttcacacttt ccaatacatg ttcgaccata
     3301 ggtttcccag caacctcgtg tagcacttta tactttttag atttcattct tgtgccttta
     3361 cctgctgcca aaattatcgc gtgtcttcgc atgaacatta acccccatta aattttacac
     3421 ttcgtcatta ttataattta atctgcaata ctctttcaac atataaaagg cattgttttt
     3481 aattcgttgt aattttaaaa acaacttttt tcttacttca aaaatacgag catcattcaa
     3541 acgcaatttt tatcagcaat gaatcaataa ttttcatatc atcataatct gttaacgtat
     3601 atatttatta gcctttcatt aaaaataaaa aaacattaat acaaactaaa aaaactgccg
     3661 acaaagcttt atgctttatc gacagtatca aatcaactta ttgcaaatgt attacatcgc
     3721 taaatataaa attgattaag cttcttctga atcttctgat gtagcgtttt tatctggtac
     3781 tacttcatct gtttcatcat atactttcat cactgcatct tgaatttctt gtctcatatc
     3841 tgaattaata ggatgcgcga tgtcgcggaa ttcaccatct ggtgtacgtt tacttggcat
     3901 tgcaacgaac aagccagagt ttccttcaat tacacgtaaa tcatgaatta cgaaagcttc
     3961 atctaatgta atggaaacga gtgctttcat tcgtccatct gtttgtattt ttctaagtct
     4021 tacatctgtc actttcatgt agtgagcccc cctatagtat atatctctgt tttatttaga
     4081 agcttgatta aacatattaa tcgaaaatta taattcctta attttactta ctaattcaat
     4141 ttctactttc acatcttttg gcaaacgcgc aacctctaca caactacgcg ctggcttgtg
     4201 ttcattaaaa tattgaccat acacttcatt tattttttgg aaatcattca tatctttaat
     4261 gaaaatggtc gctttcgcaa cagaattcaa atcagatcct gcttcttcca aaacaacctt
     4321 taaattttct aaaacttgtt ttgtctgtgc ttgaacatca gcgcttacga tatgtccatc
     4381 aatattcaat ggaatctgac cagaagtata aaccatacca ttcacaactg ttgcatgcga
     4441 atatggtcca agtgcttccg gtaatcttgt tgtgttaatg attttcataa tactaaaact
     4501 ccttttatga aaacttagat aaactgttgc caggttctac gttaaactct tgattatatt
     4561 catctacatc agataatttc actaaggaag tataatcttc aatcaatctt tgtttaactt
     4621 cttttgattc tacaagtact gatacccctt ttacatgggc tttaaactca ttcattaaat
     4681 tcataacacc attaatagag ccaccagccc tcataaaatc atcgacaact aaaacatttg
     4741 aattttctgc taaagttctc ttcgaaagta ccattgtttc tatttttctt gaagatcctg
     4801 aaacgtaatt aattgaaact gtagaacctt cagtcacctt gttgtctttt ctaatcacta
     4861 ctactggtaa atttaaaata ttagcaaccg catttgccaa tgaaatacct tttgtcgcaa
     4921 tggtaacaac agcatctaat ttttcttcca tgtaaatact ggcaattaac ttaccaactt
     4981 tgtttagtag cgatggatta cctaccaaat ctgataaaaa taaatatccg ccaggtaaca
     5041 aacgttcttt ctcttctaat agagtaatga cctcattaac aacttcagtc gcctcttctt
     5101 tactcatcat tggtttatac gtaacaccac cacttgcgcc agcagtagta attactgtac
     5161 ctaacttttc tttttggaat gtatttttta taatttggac atcttcactt attgaagact
     5221 tcgcctgttt aaattttttc acaaaaaaag ttaatggaat caatttattc ggatggttca
     5281 tcaaatattg cgtcataaaa acaattctct cgcttcgttt atatctcatc ttttcaaccc
     5341 ttctatccta atagtctaac taagtacact tcattacaac aaccgttaac tgcattataa
     5401 atattttttg cttggctttc ttttcgtgct agcccataca cagtaggtcc gcttccactc
     5461 attaacgcac catctgcacc acttttcaac atattatttt ttaatttatc gatttgtggg
     5521 tgttttgaaa cagaaattgg ctctaatcga ttagacaaac tttgacataa ttgttgataa
     5581 tctcgatttt ctaaggcctc ataacacatt ttcgtatgta cgtcgtaacg cttatctaaa
     5641 ttaatcaact taaatatatc tggtgatgat atgcctaagt ttggtttagc aagaatcacc
     5701 caagctgaag gtggtttatt taaaaactcg attttctctc ctcttccagt acatagtgca
     5761 gttttattat aaatacaaaa cggaatatct gtcccgattt tactgcctag tagagccaat
     5821 tcttccaaac tcgcccctat atcaaaaagt cgattcaatc ctcttaacgt tgctgctgca
     5881 tcagccgaac ctccagctaa gccagcagaa acaggtattt ctttatcgat agaaattgtt
     5941 acaccttgct ttagttgata ttgctcaata aatagttgcg ctgcacgata tgcgagattt
     6001 ttatgattag aaggcacata attatgttca atctcaacaa ctatctttcg atcttttctt
     6061 ttatgaaaag ttaaacgatc atttaaatca actgttgtca ttatcatttc aatctcatga
     6121 tagccatcat ttcttttaaa aagtgtatcg agcgtaaaat taattttggc tggtgccgtt
     6181 tcatatatca ttttccgccc tcttttcgtt a
//
LOCUS       DALPQQ010000128         6190 bp    DNA     linear   BCT 22-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus strain K18-6-464
            SAMD00233528-rid16434743.denovo.129, whole genome shotgun sequence.
ACCESSION   DALPQQ010000128 DALPQQ010000000
VERSION     DALPQQ010000128.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMD00233528
            Sequence Read Archive: DRR236061
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 6190)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6190)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001543423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001543423.1
            Genome Coverage       :: 77x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/22/2022 17:09:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,811
            CDSs (total)                      :: 2,743
            Genes (coding)                    :: 2,689
            CDSs (with protein)               :: 2,689
            Genes (RNA)                       :: 68
            rRNAs                             :: 2, 4, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 4, 2 (16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 54
            CDSs (without protein)            :: 54
            Pseudo Genes (ambiguous residues) :: 0 of 54
            Pseudo Genes (frameshifted)       :: 27 of 54
            Pseudo Genes (incomplete)         :: 27 of 54
            Pseudo Genes (internal stop)      :: 10 of 54
            Pseudo Genes (multiple problems)  :: 10 of 54
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6190
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMD00233528-rid16434743.denovo.129"
                     /strain="K18-6-464"
                     /db_xref="taxon:1280"
                     /geo_loc_name="Japan: Niigata"
     gene            complement(126..974)
                     /locus_tag="O7798_002227"
     CDS             complement(126..974)
                     /locus_tag="O7798_002227"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500928.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aldo/keto reductase"
                     /protein_id="HDC2864445.1"
                     /translation="MNHIEISKDVKIPVLGFGVFQIPQEQTAEAVKEAIKAGYRHIDT
                     AQSYLNETEVGQGIEASGIDRSELFITTKVWIENVNYEDTIKSIERSLQRLNLDYLDL
                     VLIHQPYNDVYGSWRALEELKENGKIKAIGVSNFGVDRIVDLGIHNQIQPQVNQIEIN
                     PFHQQEEQVAALQQENVVVEAWAPFAEGKNQLFQNQLLQAIADKYNKSIAQVILRWLV
                     ERDIVVLAKSVNPERMAQNLDIFDFELTEEDKQQIATLEESNSQFFSHADPEMIKALT
                     SRELDV"
     gene            complement(1044..1460)
                     /locus_tag="O7798_002228"
     CDS             complement(1044..1460)
                     /locus_tag="O7798_002228"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500929.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MerR family transcriptional regulator"
                     /protein_id="HDC2864446.1"
                     /translation="MKTKEVVALMNISQDTLRYYEKVGVIPPVNRDENGYRIYNDSDL
                     NWIYLVENLRNAGVSIESLIEFCRLAQLPKNENIQAQQKQILNKQLEELNENLKTIHD
                     ARDLLQYKIDNYDNHIAKINASDNYDDNVERLWERK"
     gene            1704..1871
                     /locus_tag="O7798_002229"
     CDS             1704..1871
                     /locus_tag="O7798_002229"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500930.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDC2864447.1"
                     /translation="MRKIWVIDCLYASTFFVDCLTVDSHLYTLTNFEKLNHYLIIIFI
                     AHAQHKKETCQ"
     gene            1868..4291
                     /gene="hysA"
                     /locus_tag="O7798_002230"
     CDS             1868..4291
                     /gene="hysA"
                     /locus_tag="O7798_002230"
                     /EC_number="4.2.2.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500931.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hyaluronate lyase HysA"
                     /protein_id="HDC2864448.1"
                     /translation="MTYRIKKWQKLSTITLLMAGVITLNGGEFRSVDKHQIAVADTNV
                     QTPDYEKLRNTWLDVNYGYDKYDENNPDMKKKFDATEKEATNLLKEMKTESGRKYLWS
                     GAETLETNSSHMTRTYRNIEKIAEAMRNPKTTLNTDENKKKVKDALEWLHKNAYGKEP
                     DKKVKELSENFTKTTGKNTNLNWWDYEIGTPKSLTNTLILLNDQFSNEEKKKFTAPIK
                     TFAPDSDKILSSVGKAELAKGGNLVDISKVKLLECIIEEDKDMMKKSIDSFNKVFTYV
                     QDSATGKERNGFYKDGSYIDHQDVPYTGAYGVVLLEGISQMMPMIKETPFNDKTQNDT
                     TLKSWIDDGFMPLIYKGEMMDLSRGRAISRENETSHSASATVMKSLLRLSDAMDDSTK
                     AKYKKIVKSSVESDSSYKQNDYLNSYSDIDKMKSLMTDNSISKNGLTQQLKIYNDMDR
                     VTYHNKDLDFAFGLSMTSKNVARYESINGENLKGWHTGAGMSYLYNSDVKHYHDNFWV
                     TADMKRLSGTTTLDNEILKDTDDKKSSKTFVGGTKVDDQHASIGMDFENQDKTLTAKK
                     SYFILNDKIVFLGTGIKSTDSSKNPVTTIENRKANGYTLYTDDKQTTNSDNQENNSVF
                     LESTDTKKNIGYHFLNKPKITVKKESHTGKWKEINKSQKDTQKTDEYYEVTQKHSNSD
                     NKYGYVLYPGLSKDVFKTKKDEVTVVKQEDDFHVVKDNESVWAGVNYSNSTQTFDINN
                     TKVEVKAKGMFILKKKDDNTYECSFYNPESTNSASDIESKISMTGYSITNKNTSTSNE
                     SGVHFELTK"
     gene            complement(4351..5205)
                     /locus_tag="O7798_002231"
     CDS             complement(4351..5205)
                     /locus_tag="O7798_002231"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017431906.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M23 family metallopeptidase"
                     /protein_id="HDC2864449.1"
                     /translation="MNKTNFGAYLNKSKSRKIYKIFDQNLKREFSYWQFRKLFKSYTR
                     QSDVHELKVCTQNDGTIEQIWIDEANQFGVSVTWKDNSIIGFVMRPLINYDAIKNETT
                     LKYAVPTTDCYEIFWGGDNELYNYHYLYPHQRYAIDLVIKENHKTYKNQGKVNTDYFC
                     FGKDIIAPANGTVEKVVNGVQDNSIGSTNESQFLGNYIVIKHAENEYSLIAHLHQYSI
                     IVNEGQNVKYGDIIGKVGNSGNSTEPHIHFQVMNDKNIEACTSLKIRFINNRELIKGD
                     VVCGLQAE"
     gene            complement(5416..>6190)
                     /locus_tag="O7798_002232"
     CDS             complement(5416..>6190)
                     /locus_tag="O7798_002232"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500933.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="HAD-IIB family hydrolase"
                     /protein_id="HDC2864450.1"
                     /translation="FKHNTNEEDLSHLREMEKLLEKLTNNNEVITAVLTGSTFQSVMD
                     KMDQVNMTFKPLHIFSDLSSKMFTWNNGEYVESETYKKKVLSEPFLFEDIEDILRHIS
                     AQYNVEFIPQRAFEGNETHYNFYFHSTGNHNNDSRILEALVRYANDQNYTARFSRSNP
                     LAGDPENAYDIDFTPSNAGKLYATQFLMRKYNIPVKSILGFGDSGNDEAYLSYLEHAY
                     LMSNSRDEALKQKFRLTKYPYYQGITLHVKEFVEGKYDY"
BASE COUNT         2109 a         1029 c          921 g         2131 t
ORIGIN      
        1 atatataata acttatttgc ttgctccttt cactttttaa gagtaaaaaa taacctgaaa
       61 catagacttt aacatccaag tttcaggtta gtgtaatgta aatgatttac tttgttatat
      121 tatgattaaa catctaattc tctgcttgta agtgctttaa tcatctctgg atcagcatgt
      181 gagaaaaatt ggctattact ttcttctaat gtcgcaattt gttgtttatc ttcttctgta
      241 agttcaaaat caaatatatc taagttttga gccatacgtt ctggattcac tgattttgcg
      301 agtacaacaa tgtcacgttc tactaaccag cgtaaaataa cttgtgcaat tgatttgttg
      361 tatttatctg caatggcctg caacaattga ttttggaata attgattttt accttctgca
      421 aatggtgccc aagcttctac cacaacattt tcttgttgaa gtgctgcaac ttgttcttct
      481 tgttgatgga atggattaat ttctatttgg ttcacttgtg gttgaatttg attgtgaata
      541 cctaaatcta caattcgatc aacgccgaag ttagatacac cgattgcttt aattttacca
      601 ttttctttta actcttctaa tgcacgccat gagccatata cgtcattgta aggttggtga
      661 ataagcacta gatcaagata gtccaaattt aatcgttgta atgatcgttc gattgatttg
      721 atagtatctt catagttaac attttcaatc catactttag tcgtaatgaa tagttcactt
      781 ctatcaatac ctgaagcttc aataccttga cctacttcag tttcatttaa ataactttgt
      841 gctgtatcaa tatgtctata acccgcttta attgcttctt taaccgcttc tgctgtttgt
      901 tcttgaggaa tttgaaatac tccgaaacct aatactggta tctttacatc tttacttatt
      961 tcaatatgat tcataaaatg aacctccttt atcttgtatg tccactataa accatggagc
     1021 gaactctata gcaagccata ggtttacttt ctctcccaaa gacgttcaac attgtcatca
     1081 taattatcac tagcattgat tttagcaata tgattatcat aattatcaat tttatattgt
     1141 agtaaatctc tcgcatcatg aattgtcttt aagttttcat ttaattcttc gagttgctta
     1201 tttaaaattt gcttttgctg tgcttgaata ttttcatttt taggaagctg cgctaacctg
     1261 caaaattcga taagcgattc aatactgacg cctgcatttc gcaaattttc cactaaataa
     1321 atccaattta aatcactatc attatatatt ctatatccat tttcatctcg attaactggt
     1381 ggaatcacac caaccttttc ataatatctt aaagtgtctt gagatatatt catgagcgct
     1441 acgacttctt tagttttcat tgcgactatc ctttcagtta tgtttggtcg tctaaagtaa
     1501 tgttgcttta tatattgtca tcttcgtttg aatacttctt attttattac tcaaatttaa
     1561 atttgtctct tttttaacat tttacatttc atcgttttta attactttaa aaattgtata
     1621 acttaaatat ttaaaatgat ataatcacta agattgataa tatttaattt tttgaaaatt
     1681 attttagttg caatttttgg gtgatgcgga aaatttgggt gatcgattgt ttatatgcat
     1741 caacattctt tgtggattgt ttgacagtag acagtcattt gtatacgtta acgaattttg
     1801 aaaaattgaa tcattattta atcataatat tcattgcgca cgcgcaacac aaaaaggaga
     1861 catgtcaatg acatatagaa taaagaaatg gcaaaaatta tccaccatta cgttattaat
     1921 ggctggtgtg attactttga atggtggtga attcagaagt gttgataaac atcaaatcgc
     1981 tgtggctgat acgaatgttc aaacgccaga ttatgaaaaa ttgaggaaca catggctgga
     2041 cgttaactat ggttatgata agtatgatga gaataatcca gatatgaaga agaagtttga
     2101 tgctacagag aaagaggcga cgaatttact caaggaaatg aaaactgaaa gtggtaggaa
     2161 atacttgtgg tcaggagcgg aaacccttga aactaattct tctcatatga ctcgtaccta
     2221 tcgtaatatt gagaaaatcg cagaagcgat gaggaatcct aaaaccactt taaatactga
     2281 cgaaaataag aagaaagtga aagatgccct tgagtggctg cataaaaatg catatggaaa
     2341 agaaccagat aaaaaagtaa aagaattaag tgagaatttt actaaaacaa ctggcaagaa
     2401 taccaactta aattggtggg attatgaaat tggaacacct aaatcattaa caaatacgct
     2461 tatattgctg aatgatcaat tttcaaatga agaaaagaaa aaattcactg cccctattaa
     2521 aactttcgcc ccagatagtg acaaaatatt atcttctgta ggaaaagctg aacttgctaa
     2581 aggcggaaat ctagtagaca tttctaaggt gaaactttta gaatgtatta tcgaagaaga
     2641 taaagatatg atgaaaaagt ctatagattc atttaataaa gtcttcactt acgttcaaga
     2701 ttctgccact ggtaaagaac gtaatggatt ttataaagat ggctcttaca ttgatcatca
     2761 agacgttcca tacactggtg cttatggcgt tgtactctta gaggggattt ctcaaatgat
     2821 gccgatgata aaagaaacac cttttaatga taaaacccaa aatgatacaa ccttaaagtc
     2881 atggattgac gacggattta tgccactcat ttataaaggt gaaatgatgg atttatcacg
     2941 aggtagagct atcagtcgtg aaaatgaaac cagtcactca gcatctgcaa cagtaatgaa
     3001 atcattgttg agattaagtg atgccatgga tgattcaaca aaagctaagt ataaaaagat
     3061 tgtcaaatct tcagtagagt cagattcaag ttataaacaa aatgattatt taaattcata
     3121 ttcggacata gataaaatga agtctttaat gacagataac agtatttcta aaaacggatt
     3181 aacacaacaa cttaaaatat ataatgacat ggatcgtgtc acctatcata acaaagactt
     3241 agactttgca tttggtttaa gtatgacgtc gaaaaacgta gcacgctatg aaagtatcaa
     3301 cggagagaat ttaaaaggtt ggcacactgg tgctggaatg tcttatttat ataacagcga
     3361 tgtcaaacac tatcatgata acttctgggt gacagccgat atgaaacgtt tatcaggtac
     3421 aacaacttta gacaatgaaa tattaaaaga tacggatgat aaaaagtcga gtaaaacttt
     3481 tgttggcgga acaaaagttg atgaccaaca tgctagtatc ggaatggatt ttgaaaatca
     3541 ggacaaaact ttaactgcca aaaaatcata tttcatatta aacgataaaa ttgtcttctt
     3601 aggaactggc attaaaagta ctgattcatc aaagaatcca gttacaacga ttgaaaatcg
     3661 caaagcgaat gggtatacgt tatatacaga cgataaacaa acaaccaatt ctgataatca
     3721 ggaaaacaat tcagtctttt tagagtccac agataccaaa aagaacatcg gttatcattt
     3781 tttaaacaaa ccgaaaataa ctgtaaaaaa agaaagtcat actggtaagt ggaaagaaat
     3841 aaataaaagt caaaaggata cacaaaaaac tgatgagtat tatgaagtaa ctcaaaagca
     3901 ttctaattct gacaataaat atggatatgt gttgtatcca ggcttatcta aagatgtctt
     3961 taagacaaaa aaagatgaag taactgtcgt taagcaagaa gatgacttcc acgttgtgaa
     4021 agataatgaa tcggtttggg ctggtgttaa ttatagtaat agcactcaaa cttttgacat
     4081 taacaacact aaagtcgaag ttaaagccaa aggtatgttt atacttaaaa agaaagatga
     4141 taacacttat gaatgtagct tctataatcc tgaatctaca aattccgctt cagatattga
     4201 atctaaaatt tcaatgaccg gttactctat tacaaacaaa aatacgtcga cttctaatga
     4261 atccggcgtg cactttgaat taactaaata agcaagaaaa tctcgacact ataccatttt
     4321 tatagtgtcg agattttata agtatcgcca tcattcagct tgtaatccgc agaccacatc
     4381 ccctttgata agttctcgat tatttataaa tcgaattttt aaagatgtac atgcttcaat
     4441 attcttatca ttcattactt gaaaatgtat atgaggttca gtagaattgc cagaattccc
     4501 aaccttccca atgatatcac catatttaac attttgcccc tcattcacaa tgattgaata
     4561 ttggtgtaaa tgagctatta agctatactc attttctgcg tgcttaatta caatataatt
     4621 tcctaaaaac tgtgattcat tcgtacttcc aatactgttg tcttgaaccc cattcactac
     4681 tttttcaact gtaccatttg ctggcgcaat gatatctttt ccaaaacaaa aataatcagt
     4741 atttactttt ccttgattct tatatgtttt atgattttct ttaataacta aatcaatagc
     4801 atacctttga tgtgggtata aatagtgata attatataat tcattatctc caccccaaaa
     4861 aatctcatag caatctgttg tcggcactgc gtattttaaa gtcgtttcat tcttaatcgc
     4921 atcataatta attaacggac gcataacaaa tccgataata ctattatctt tccaagtcac
     4981 tgacactcca aattgatttg cttcatctat ccatatttgc tcaatagtac catcattttg
     5041 agtacacact tttaattcat gtacatcaga ctgccttgta taagatttga aaagtttcct
     5101 aaactgccaa taactaaact ctcgcttcaa attttgatca aaaatcttat atattttcct
     5161 gctcttactt ttatttaaat aagccccaaa gtttgtttta ttcatatata cttaacctat
     5221 tatattaatt ttggtatcaa ttctttctcc agttcctgcg tcatttttgc gctacctgaa
     5281 tcgtctacac ttaattggat aaatcaacat ataaataatt ttttaaagct aaagtgtagt
     5341 cgattcacca tattttctaa tcatccctta aatattaata tttgcactta aaaagtatac
     5401 atatcactca actaatcaat aatcatactt accttcaaca aattctttaa catgcagtgt
     5461 tatcccttga taatatggat attttgttaa tctaaatttc tgctttaatg cttcatctct
     5521 actattcgac atcaaatatg catgttcaag atagcttaaa tatgcttcgt cattgccgct
     5581 atctccaaaa cctaatattg attttactgg tatattatat ttcctcatca gaaattgagt
     5641 agcatataat tttccagcat ttgacggtgt gaagtcaata tcatacgcat tttcaggatc
     5701 accagctaat ggattgcttc gactaaatct cgctgtatag ttttggtcat ttgcgtatct
     5761 gacaagtgct tctaggatac gactatcatt gttgtgatta cctgttgaat gaaaataaaa
     5821 attataatgt gtttcattac cttcaaatgc tctttgtgga ataaattcga cattatattg
     5881 cgcagaaata tgacgtaata tatcttcaat atcttcaaat aaaaatggtt cgctcaagac
     5941 tttcttttta tatgtttctg attcaacata ttcgccatta ttccaagtga acattttaga
     6001 actcaaatca gaaaagatat gtaatggttt aaacgtcata ttaacttgat ccattttatc
     6061 catgacactt tgaaatgtac ttcctgtcaa tacagcagtg atcacttcat tattattagt
     6121 tagtttttcc aacaattttt ccatttctct taaatgactt aaatcttctt catttgtatt
     6181 atgtttaaaa
//
LOCUS       DALPQQ010000129         6095 bp    DNA     linear   BCT 22-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus strain K18-6-464
            SAMD00233528-rid16434743.denovo.130, whole genome shotgun sequence.
ACCESSION   DALPQQ010000129 DALPQQ010000000
VERSION     DALPQQ010000129.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMD00233528
            Sequence Read Archive: DRR236061
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 6095)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6095)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001543423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001543423.1
            Genome Coverage       :: 77x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/22/2022 17:09:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,811
            CDSs (total)                      :: 2,743
            Genes (coding)                    :: 2,689
            CDSs (with protein)               :: 2,689
            Genes (RNA)                       :: 68
            rRNAs                             :: 2, 4, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 4, 2 (16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 54
            CDSs (without protein)            :: 54
            Pseudo Genes (ambiguous residues) :: 0 of 54
            Pseudo Genes (frameshifted)       :: 27 of 54
            Pseudo Genes (incomplete)         :: 27 of 54
            Pseudo Genes (internal stop)      :: 10 of 54
            Pseudo Genes (multiple problems)  :: 10 of 54
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6095
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMD00233528-rid16434743.denovo.130"
                     /strain="K18-6-464"
                     /db_xref="taxon:1280"
                     /geo_loc_name="Japan: Niigata"
     gene            842..1237
                     /locus_tag="O7798_002233"
     CDS             842..1237
                     /locus_tag="O7798_002233"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500481.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDC2864451.1"
                     /translation="MLGKYWIQLLIATVIISLISIKAFPLAIGALYLPVIFKVIKLQL
                     NLSKGLIDDVNAQTFIKSNQSGIVISVICCLLITAILYYTLDGFYASLTGVLGTLVAL
                     NPYTTIVSAVLYILTAIATVEATKTKYRN"
     gene            1433..2818
                     /gene="fumC"
                     /locus_tag="O7798_002234"
     CDS             1433..2818
                     /gene="fumC"
                     /locus_tag="O7798_002234"
                     /EC_number="4.2.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000116229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class II fumarate hydratase"
                     /protein_id="HDC2864452.1"
                     /translation="MSVRIEHDTFGEIEVPADKYWGAQTERSKRNFPVGKERMPIEVV
                     YGFAQLKRAAAIANFDLGKLSEAKKDAIVYACDQILSGELDEHFPLVVWQTGSGTQSN
                     MNVNEVVSYVANMYLKDHQSDESIHPNDDVNKSQSSNDTFPTAMHVALYQEVETKLEP
                     ALKLLRNTLKEKEDKFDSIIKIGRTHLQDATPIKLGQEISGWRYMLDRCETMLSESKK
                     HILNLAIGGTAVGTGINAHPEFGDKVAHYISENTGYPFVSSENKFHALTAHDEVVQLH
                     GTLKALAGDLMKIANDVRWLASGPRAGLAEISIPENEPGSSIMPGKVNPTQCEMLTMV
                     AVQVMGNDTVVGFASSQGNFELNVYKPVIMHNTLQSIYLLADGMETFNNNCAVGIEPI
                     EENIDNYLNQSLMLVTALNPHIGYEKAAQIAKKAHKEGLTLKESAIQTGYVTEEQFEA
                     WIKPEDMVDPH"
     gene            complement(3281..4102)
                     /locus_tag="O7798_002235"
     CDS             complement(3281..4102)
                     /locus_tag="O7798_002235"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500479.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RluA family pseudouridine synthase"
                     /protein_id="HDC2864453.1"
                     /translation="MKFKIPENFNDLSLRDIFQQLKVPKKDLHHLNMSKDITINDKPA
                     RLMDKVHTGDDVFVPTIDEKSNYVPSYRYAQIKYEDDDMAIVMKPKGVKTHPNDLKES
                     NTLMNHVIYTIDSDYVEPIHRLDQETVGLLIVAKNPLMKKILDRMLEDNDITRIYKAN
                     VKALLPLKPQTIDMPIGKDKFHSNKRRVSPTGQRAITHILTSKMIKEAVCQLEIKLDT
                     GRTHQIRVHLAEIGHPVIGDPLYGDSTLRQLELESYKIEFVHPLTKEVISVSLDD"
     gene            4265..5377
                     /locus_tag="O7798_002236"
     CDS             4265..5377
                     /locus_tag="O7798_002236"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500478.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GAF domain-containing sensor histidine kinase"
                     /protein_id="HDC2864454.1"
                     /translation="MEQRTRLALLKEIAEFLNEETEMYSMTQGALKYLIEGSNFTTGW
                     IFFINSVGEHELVSHVALPQSLTADHCHYIKDGSCWCVKAFNQRRLMKASNIVNCSRI
                     NLASKAFPSQNDNITHHATVPLKSGQEQFGILNVASPNTEIYSDEDLELLESVAFQLG
                     SAIKRIYLTDREKEAAKINERNRLARDLHDSVNQMLFSVKLTAHAAYGMSNESIAKQA
                     FKTIEETSQNAVNEMRALIWQLKPVGLEQGLIHALTAYSKLMHIQLNVNVEGLIDLSN
                     EIEENIYRALQECINNVKKHADTNKMDLTLKQMNDILYIDVIDYGQGFEIDNVQIASS
                     HGINNIKQRVKLLRGKVTFHSQPTKGTQIQFTIPIK"
     gene            5399..6022
                     /locus_tag="O7798_002237"
     CDS             5399..6022
                     /locus_tag="O7798_002237"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500477.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HDC2864455.1"
                     /translation="MNKVILVDDHYIVRQGLRFLLSTIENIEVLQDFADGETFLEYLK
                     EHEHPDIVLLDLVMPGMNGIEITEYIKAHYPDIKVLVLTSYVDDEHVISAINKGADGY
                     EMKDVEPQQLIETIRRVMNGEKMIHPKAQDVFETVSQKPHYTNKLSKREIEVLREMVK
                     GKTNKEIAETLFVSEKTIKTHVSHIFSKLQVSDRTQAAIYAMENKLI"
BASE COUNT         2174 a          895 c         1067 g         1959 t
ORIGIN      
        1 aagaaatgga acaaatctct gatcaaaatg atcaagaaaa gaattctgaa gaagacagtc
       61 agtaaagtat tataattgtg taatattcag ttatttatca tgtaaataat gtatagtata
      121 gaacatatat caaataggat tgattatctt gaatatgaag ttaggtagca ttttgttacc
      181 tagctttttt attatattca tagaagctga ctttctgcta gtttcagtgt tggggctgtt
      241 tccccaactt acattgtttg tagaaattga ggatccaatt tttctatgtt gtggccccgc
      301 caacttgcat gttattttaa gctgactttc caccaacttc tgagtttgtg gcccgtttcc
      361 ctaatttgca atgtctgtag aaattagaaa tccgatctca ctattttggg gcctcgccaa
      421 cttgcatgtt attttaagct gactttccac cagtttctga gtttgtggcc cgtttcccca
      481 atttgcaatg tctgtagaaa ttgggaatcc aattccacta tgttggagct ccaccaactt
      541 gcatgaaata gaagctgaca ttccgaagcc tctatgttgt ggactgcagt caactactgc
      601 caatataact ttgtaaagca taaaacattg atttgtgtac cagacatagt aatatatcaa
      661 aagttcaatt ttaaatatta aaacaccatt taaacggaat tgataattaa ttactccaga
      721 cataattgaa agaagtcatc tatcagtaat atttttaatg aaatcattaa accgcgtttc
      781 ttaatatgcc aagattatga tatgctattg aagaatgaaa ttagaggaga tttatatatt
      841 tatgttagga aaatactgga ttcaattatt gatagcaaca gttattataa gtttaatatc
      901 aattaaagct tttccattgg caattggggc attatattta cctgttattt tcaaagtaat
      961 aaaattacaa ctcaatttat caaaaggatt aattgatgat gttaatgcgc aaacattcat
     1021 taaaagtaat caatcaggta ttgtaatcag tgtaatttgt tgtttattaa taacagcaat
     1081 attgtattat acacttgatg ggttttatgc gagtttaaca ggagttttag gtacgcttgt
     1141 tgctctaaat ccatatacga caattgttag tgctgtatta tatatactta cagctattgc
     1201 tacggttgaa gctactaaaa caaagtatcg taattaaact tagttcaata ataactaaat
     1261 aatgatagat aacacactaa tcgtatgacc gtatcactgt aataaagggt gaacacgtgc
     1321 gattagtgta tttttatttc aaattatgaa aacgttttaa tcataaattg ctcaattaaa
     1381 ttatttaatg atatactaca gttaaataaa cagtgataag gggagaaatt gaatgtcagt
     1441 aagaattgaa catgatactt ttggagaaat agaagtacct gcagataaat attggggtgc
     1501 tcaaacagaa agaagtaaac gtaatttccc agttggtaaa gagcgtatgc caatcgaagt
     1561 agtttatggt tttgcacaac taaagcgtgc agcagcaata gctaattttg atttaggaaa
     1621 attaagcgag gcaaagaaag atgccattgt atacgcatgt gatcaaattt tatcaggtga
     1681 attagatgaa cacttcccac tagttgtatg gcaaacagga agcggtacac aaagtaatat
     1741 gaatgtgaac gaagtagtaa gttatgttgc taatatgtat ttaaaagatc atcaaagtga
     1801 tgaaagtatc cacccaaatg atgatgtaaa taaatctcaa agttcgaatg atacattccc
     1861 aactgctatg cacgttgcat tatatcaaga ggttgaaaca aaattagaac ctgcattaaa
     1921 acttttaaga aatactttga aagaaaaaga agataaattt gattcaatta ttaaaattgg
     1981 tcgtacacat ttacaagatg caacgccgat caaactagga caagagatta gtggctggcg
     2041 ttatatgctt gaccgttgtg aaacaatgtt atctgaatct aagaagcaca ttttaaatct
     2101 tgccatcggt ggtacggctg ttggtactgg tattaatgcg catcctgaat ttggtgataa
     2161 agtggcacat tatatttcag aaaatacggg ttatccattt gtatcttctg aaaataaatt
     2221 ccacgcactt acagcgcatg atgaagttgt tcaattgcat ggaacattga aggcattagc
     2281 aggagactta atgaaaattg ctaatgatgt gagatggttg gcttcagggc cacgagctgg
     2341 tttggcagaa atttctatcc ctgaaaatga accaggttca tcaattatgc ctggtaaagt
     2401 taatcctaca caatgtgaaa tgttaacaat ggttgcagtc caagtaatgg gtaatgatac
     2461 agttgttggc ttcgcaagtt cacaaggtaa ctttgaattg aatgtttata aaccagttat
     2521 tatgcataat acactacaat caatttatct tttagctgat ggtatggaaa catttaataa
     2581 caattgtgca gtgggcattg aaccaatcga agagaatatt gataattatt taaatcaatc
     2641 attaatgtta gttactgcat taaatccaca tattggttat gaaaaagcag ctcaaattgc
     2701 taagaaagcc cataaagaag gtttaacttt aaaagaatct gcaattcaaa ctggatatgt
     2761 tacagaagaa caatttgaag catggattaa accagaagat atggtagatc ctcattaatt
     2821 aaatattaat ataaaataaa gtttgggcat tacaggtaga tgtagtgttc aagctttatt
     2881 ttttgtctat gtcaaattga acttataagt ctgatttgat atagagccat gaaaaggaaa
     2941 aacttttcat ggagtccgtt ttattataga acctattttt tatatgatga attgttgtac
     3001 atgtattggc caaacaacct gtgataaaaa tcttatgatg tcatgtattg tccatagata
     3061 cacgtaacgc agttgaaaaa gactacaagt cattatccaa ggatgttata aaatgaataa
     3121 ttactaaaat atcaaaatat aaaatcctaa gcatcgtaaa aaacaaaaaa accgaacatc
     3181 tgaaaaaatt aataattttc catctatccg atttaagttg atacttgatt tagttacaat
     3241 gcggtattgc atgtttaaat atcatgcaaa actaatcaaa ttagtcatcc aaagaaacgg
     3301 aaatgacttc cttagtcaag ggatgcacaa actctatttt gtaactttca agttctaatt
     3361 gtcttaacgt tgaatcacca tataaaggat caccaataac agggtgacca atttcagcta
     3421 aatgcacacg aatttgatga gtacgtccag tatccaactt gatttcaagt tggcacacag
     3481 cttcttttat catttttgaa gttaaaatgt gtgtaattgc acgctgtcca gtaggagaca
     3541 cacgtcgttt attcgaatgg aatttatctt taccaattgg catatcaatc gtttgtggtt
     3601 ttaaaggtaa aagtgcctta acatttgctt tgtatatccg cgtaatatca ttgtcttcta
     3661 acatgcgatc aagaattttt ttcattaaag gatttttagc aacaattaat aatcctactg
     3721 tttcctggtc cagtcgatga attggttcga catagtcact atcaatagtg taaatcacat
     3781 gattcattaa agtattgctt tcttttaaat cattagggtg agtcttaaca cctttaggtt
     3841 tcattacgat tgccatatca tcgtcttcgt atttaatttg tgcataacga taacttggaa
     3901 cataattact tttttcatcg atggttggaa caaatacatc gtcgccagta tgcactttat
     3961 ccattaatcg cgcaggttta tcattaatag taatatcttt agacatattt aaatgatgta
     4021 aatctttttt aggtacctta agttgttgga aaatatctcg taaacttaag tcattaaagt
     4081 tttctggtat tttaaatttc ataaaatcct cctatagtct ttaatatcat atcacaaatc
     4141 agttctccga aatataacta ttgagtaatc aaggccattt tatcatgttt acgtctaaga
     4201 tttaaaaata taataactca atgtataata gttaatacac gtaaaaatga attggagcga
     4261 tttgatggaa caaaggacgc gactagcttt attaaaagag attgccgaat ttttaaacga
     4321 agaaactgaa atgtatagca tgacccaagg tgcgttaaaa tatttaattg agggcagtaa
     4381 tttcacgaca ggctggatat ttttcatcaa tagcgtaggt gaacatgaac ttgtatcaca
     4441 tgtggctcta ccacaatctt tgacagcaga ccactgtcac tatattaaag atgggtcttg
     4501 ttggtgtgtg aaagcattta atcaacgtag gctaatgaaa gcgtcgaata tcgtcaattg
     4561 ttctcgtatt aacttagcct ctaaagcatt tcctagccaa aatgacaata ttacacatca
     4621 tgcaacggta ccacttaaat cgggtcaaga acaattcggc attttaaatg tagcgtctcc
     4681 aaatactgaa atatatagcg atgaagattt agagttgcta gagtctgtcg catttcaatt
     4741 agggtcagcc atcaaacgta tttatttaac agaccgtgaa aaagaagcgg caaaaattaa
     4801 tgaacgtaat cgtttagcta gagatttaca tgattcagta aatcaaatgt tattttctgt
     4861 aaaactaaca gcacatgctg cgtatggcat gtcaaacgaa tccatcgcta aacaagcatt
     4921 caagacgatt gaggaaacga gtcaaaatgc cgttaatgaa atgcgtgcat tgatttggca
     4981 acttaagcca gttggacttg agcaaggttt aattcatgct ttgacagcat atagtaaatt
     5041 aatgcatata caattaaatg taaatgtaga aggtttaatc gatttatcta atgaaatcga
     5101 agaaaacata tacagagcat tacaagagtg tattaataat gttaagaaac atgctgatac
     5161 gaataaaatg gatcttacat taaaacaaat gaacgatata ctatatattg acgtgattga
     5221 ttatggtcaa ggatttgaga tcgataatgt tcagatagct tcatcacacg gtattaataa
     5281 cataaaacaa agagttaaat tattaagagg taaagtgacc tttcattctc agccaacaaa
     5341 gggtacacaa atacaattca caattcctat aaaatagctt gatttaagga gataacccat
     5401 gaacaaagta atattagtag atgaccatta tattgtgcga caaggattgc gatttttatt
     5461 atccacgatt gaaaacatag aagttttaca agactttgca gatggagaaa catttttaga
     5521 atatttaaaa gagcatgagc accctgatat tgtgctatta gatttagtga tgcctggcat
     5581 gaatggtatt gaaattacgg aatatattaa ggcacattat ccggatatta aagttttggt
     5641 attaacaagt tatgttgatg atgaacatgt aatttcagca atcaataaag gtgctgatgg
     5701 ttatgaaatg aaagacgttg agcctcagca attaattgaa actattagac gagttatgaa
     5761 cggtgaaaaa atgatacatc ctaaggcaca agatgtattc gaaacagtta gccaaaaacc
     5821 acactacacg aataagttgt caaagagaga aattgaagtg ttacgtgaaa tggttaaagg
     5881 taaaacaaat aaagagattg cagaaacttt atttgtatct gaaaaaacaa ttaaaacaca
     5941 tgtcagtcat atatttagta aattacaagt tagcgatcgt acacaagcag caatttatgc
     6001 aatggaaaat aagttgattt agaatgagct tttaaatatt tgtcgaaaaa tagacaattt
     6061 ttaatctgat tttgatgaat tttttatagc gatag
//
LOCUS       DALPQQ010000130         6051 bp    DNA     linear   BCT 22-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus strain K18-6-464
            SAMD00233528-rid16434743.denovo.131, whole genome shotgun sequence.
ACCESSION   DALPQQ010000130 DALPQQ010000000
VERSION     DALPQQ010000130.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMD00233528
            Sequence Read Archive: DRR236061
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 6051)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6051)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001543423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001543423.1
            Genome Coverage       :: 77x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/22/2022 17:09:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,811
            CDSs (total)                      :: 2,743
            Genes (coding)                    :: 2,689
            CDSs (with protein)               :: 2,689
            Genes (RNA)                       :: 68
            rRNAs                             :: 2, 4, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 4, 2 (16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 54
            CDSs (without protein)            :: 54
            Pseudo Genes (ambiguous residues) :: 0 of 54
            Pseudo Genes (frameshifted)       :: 27 of 54
            Pseudo Genes (incomplete)         :: 27 of 54
            Pseudo Genes (internal stop)      :: 10 of 54
            Pseudo Genes (multiple problems)  :: 10 of 54
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6051
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMD00233528-rid16434743.denovo.131"
                     /strain="K18-6-464"
                     /db_xref="taxon:1280"
                     /geo_loc_name="Japan: Niigata"
     gene            complement(70..1248)
                     /gene="deoB"
                     /locus_tag="O7798_002238"
     CDS             complement(70..1248)
                     /gene="deoB"
                     /locus_tag="O7798_002238"
                     /EC_number="5.4.2.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498701.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphopentomutase"
                     /protein_id="HDC2864456.1"
                     /translation="MTRPFNRVHLIVMDSVGIGEAPDAADFKDEGSHTLRHTLEGFDQ
                     TLPNLEKLGLGNIDKLPVVNAVEQPEAYYTKLSEASVGKDTMTGHWEIMGLNIMQPFK
                     VYPNGFPEELIQQIEEMTGRKVVANKPASGTQIIDEWGEHQMKTGDLIVYTSADPVLQ
                     IAAHEDIIPLEELYDICEKVRELTKDPKYLIGRIIARPYVGEPGNFTRTSNRHDYALK
                     PFGKTVLDHLKDGGYDVIAIGKINDIYDGEGVTEAVRTKSNMDGMDQLMKIVKKDFTG
                     ISFLNLVDFDALYGHRRDKPGYAQAIKDFDDRLPELFSNLKEDDLVIITADHGNDPTA
                     PGTDHTREYIPVIMYSPKFKGGHALESDTTFSSIGATIADNFNVTLPEFGKSYLKELK
                     "
     gene            complement(1276..1938)
                     /gene="deoC"
                     /locus_tag="O7798_002239"
     CDS             complement(1276..1938)
                     /gene="deoC"
                     /locus_tag="O7798_002239"
                     /EC_number="4.1.2.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498700.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="deoxyribose-phosphate aldolase"
                     /protein_id="HDC2864457.1"
                     /translation="MKFEKYIDHTLLKPESTRTQIDQIIDEAKAYNFKSVCVNPTHVK
                     YAAERLADSEVLVCTVIGFPLGASTTATKAFETEDAIQNGADEIDMVINIGALKDGRF
                     DDVQQDIEAVVKAAKGHTVKVIIETVLLDHDEIVKASELTKAAGADFVKTSTGFAGGG
                     ATAEDVKLMKDTVGADVEVKASGGVRNLEDFNKMVEAGATRIGASAGVQIMQGLEADS
                     DY"
     gene            complement(2019..3371)
                     /gene="tet(38)"
                     /locus_tag="O7798_002240"
     CDS             complement(2019..3371)
                     /gene="tet(38)"
                     /locus_tag="O7798_002240"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001100300.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetracycline efflux MFS transporter Tet(38)"
                     /protein_id="HDC2864458.1"
                     /translation="MNVEYSKIKKAVPILLFLFVFSLVIDNSFKLISVAIADDLNISV
                     TTVSWQATLAGLVIGIGAVVYASLSDAISIRTLFIYGVILIIIGSIIGYIFQHQFPLL
                     LVGRIIQTAGLAAAETLYVIYVAKYLSKEDQKTYLGLSTSSYSLSLVIGTLSGGFIST
                     YLHWTNMFLIALIVVFTLPFLFKLLPKENNTNKAHLDFVGLILVATIATTVMLFITNF
                     NWLYMIGALIAIIVFALYIKNAQRPLVNKSFFQNKRYASFLFIVFVMYAIQLGYIFTF
                     PFIMEQIYHLQLDTTSLLLVPGYIVAVIVGALSGKIGEYLNSKQAIITAIILIALSLI
                     LPAFAVGNHISIFVISMIFFAGSFALMYAPLLNEAIKTIDLNMTGVAIGFYNLIINVA
                     VSVGIAIAAALIDFKALNFPGNDALSSHFGIILIILGLMSIVGLVLFVSLNRWTQSEK
                     "
     gene            complement(3378..4085)
                     /gene="deoD"
                     /locus_tag="O7798_002241"
     CDS             complement(3378..4085)
                     /gene="deoD"
                     /locus_tag="O7798_002241"
                     /EC_number="2.4.2.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498698.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="purine-nucleoside phosphorylase"
                     /protein_id="HDC2864459.1"
                     /translation="MKSTPHIKPMNDVEIAETVLLPGDPLRAKFIAETYLDDVEQFNT
                     VRNMFGFTGTYKGKKVSVMGSGMGMPSIGIYSYELIHTFGCKKLIRVGSCGAMQENID
                     LYDVIIAQGASTDSNYVQQYQLPGHFAPIASYQLLEKAVETARDKGVRHHVGNVLSSD
                     IFYNADTTASERWMRMGILGVEMESAALYMNAIYAGVEALGVFTVSDHLIHETSTTPE
                     ERERAFTDMIEIALSLV"
     gene            4321..5076
                     /locus_tag="O7798_002242"
     CDS             4321..5076
                     /locus_tag="O7798_002242"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498696.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GntR family transcriptional regulator"
                     /protein_id="HDC2864460.1"
                     /translation="MEVVYVTQTQPKFLTIYNTLYKEIQIGKYPSGHALPTEKELCAR
                     FDVSRMTLRQAIKLLAEDGIVESTRGKGHFVIPQTNAQHASSMDQFKHPLDQILLARV
                     SMSSINYRVDLESEYTNHLFANHPSAVIAMERYYQKKDNHSKQADAFCFTFIPLNVID
                     TFKVNTQNEDDMKTFVEQTIYSNAYQSDLKMSITKAPHFKNHSHVFDGDTHCWLIIET
                     LYAQTPYPIMINKWYIPQEISELTLTRIRQSDY"
     gene            complement(5268..5993)
                     /gene="sasD"
                     /locus_tag="O7798_002243"
     CDS             complement(5268..5993)
                     /gene="sasD"
                     /locus_tag="O7798_002243"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_070002951.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell-wall-anchored protein SasD"
                     /protein_id="HDC2864461.1"
                     /translation="MKKLATVGSLIVTSTLVFSSMPFQNAHADTTSMNVSNKQSQNVQ
                     NHRPYGGVVPQGMTQAQYTELEKALPQLSAGSNMQDYNMKLYDATQNIADKYNVIITT
                     NVGVFKPHAVRDMNGHALPLTKDGNFYQTNVDANGVNHGGSEMVQNKTGHMSQQGHMN
                     QNTHMNQQPHMQQGHMQSSNHQMMSPKANMHSSNHQMNQSNKKVLPAAGESMTSSILT
                     ASIAALLLVSGLFLAFRRRSTNK"
BASE COUNT         1919 a         1159 c          938 g         2035 t
ORIGIN      
        1 aaaacagcag tgaagaaaac tattgttata gttaacttca ctgctgtttt tataatatct
       61 aaatttattc tatttcaatt cctttaaata acttttaccg aactctggta atgttacgtt
      121 gaaattatct gctatagttg caccgataga actgaatgta gtatcacttt ctagtgcatg
      181 accaccttta aatttcggac tgtacataat tactgggata tattctctcg tatggtccgt
      241 acctggcgct gtcgggtcat taccatggtc tgctgtaata attactaaat cgtcttcttt
      301 taagttgcta aacagttctg gcaagcgatc atcgaaatct ttaattgctt gtgcataacc
      361 tggtttatca cgacgatgac cgtataatgc atcaaagtct actaagttta agaagctaat
      421 acctgtgaaa tctttcttaa caattttcat caattgatcc ataccgtcca tgttactctt
      481 cgtacgaacc gcttctgtta caccttcacc atcataaatg tcattaattt taccgatggc
      541 aataacatca taaccaccgt ctttcaaatg atctaagaca gttttaccaa aaggttttaa
      601 cgcatagtca tgtcgattag atgtacgtgt aaagtttcct ggttcaccaa catatggacg
      661 tgcgataata cgaccaatta aatatttagg gtcttttgtc aactcacgaa ccttttcaca
      721 aatatcatat aactcttcta atgggataat gtcttcatgt gcagcaattt gcaatactgg
      781 gtctgcactt gtataaacaa ttaagtcacc agttttcatt tggtgctcgc cccactcatc
      841 gataatttgc gtacccgatg ccggtttgtt agcaacaact ttacgacctg tcatttcttc
      901 aatttgttga attaactctt cagggaatcc attagggtat actttaaaag gttgcataat
      961 atttaatccc ataatttccc agtgaccagt cattgtatct ttaccaactg aagcttcact
     1021 caatttagta tagtatgctt ctggttgttc aactgcattt actactggta atttatcgat
     1081 gttccctaga cctaactttt caaggtttgg taaagtttga tcgaaacctt ctaaggtatg
     1141 tcttaaagta tgtgaacctt catctttaaa atcagctgcg tctggcgctt caccaatacc
     1201 tactgaatcc attacgatta aatgtacacg attaaatggt cttgtcatag ctatcactcc
     1261 caaaatttat atatattagt aatctgaatc tgcttctaaa ccttgcataa tttgaacacc
     1321 tgcgctcgca ccaatacgtg tcgcacctgc ttcaaccatt ttattgaaat cttctaaatt
     1381 acgtacgcca cctgatgctt ttacttctac atcagcacct actgtatctt tcattaattt
     1441 aacgtcttct gcagtcgcac cgccacctgc aaaacctgtt gaagttttaa cgaagtccgc
     1501 accagccgct tttgttaatt cactcgcttt tacaatttcg tcatggtcca acaataccgt
     1561 ctcaataatc acttttactg tgtgaccttt cgcagcttta accactgctt caatgtcttg
     1621 ttgtacatca tcaaaacgtc catcttttaa tgcgccgatg ttgatgacca tgtcaatttc
     1681 atctgcacca ttttgaattg catcttctgt ttcaaatgct ttcgttgcag ttgtcgacgc
     1741 acctaatggg aatcctatta ccgtacaaac gagcacctct gaatcagcta gtcgctctgc
     1801 tgcatattta acatgtgttg gattcacaca tacagattta aaattgtatg ctttcgcttc
     1861 atcgatgatt tgatcgattt gcgtacgtgt tgactcaggc ttcaataaag tgtgatctat
     1921 atatttctca aatttcatac ttactactcc tcgtgttata taatctcttt atttaatttt
     1981 actataaata cgaatatatc tcgcgaattt atatctattt atttttcaga ttgtgtccaa
     2041 cgatttaagc tgacgaataa aactaatccg acaatactca ttaaacctaa aataattaaa
     2101 ataataccga aatgtgaact taatgcatca ttgcctggga aatttaatgc tttaaaatcg
     2161 attagagccg cagcaatcgc aatacctaca gataccgcca cattaataat taaattataa
     2221 aaaccaatag ccacacctgt catattaaga tctattgttt taatggcttc gttaagtaaa
     2281 ggtgcataca ttaaagcaaa gctacctgca aagaatatca tagaaatgac gaagattgaa
     2341 atgtgattac ctactgcaaa tgcaggtaaa atcaagctca gtgctattaa aataattgct
     2401 gtgataatcg cttgttttga attcagatat tcgccgattt taccacttag tgcaccaaca
     2461 atgactgcta ctatataacc cggtactaat aacagtgatg ttgtgtctag ttgcagatga
     2521 taaatttgct ccattatgaa tgggaacgta aaaatataac ccaattggat agcatacatt
     2581 acaaatacta taaataaaaa tgaagcataa cgtttatttt ggaaaaatga tttatttact
     2641 aatggacgtt gcgcattttt aatatatagc gcaaaaacga taatcgcaat taaggcacca
     2701 atcatatata accaattaaa gttcgtaata aacagcatga ctgttgtagc aatagttgcc
     2761 actagaatta agccaacaaa atctaaatga gctttattcg tattattttc ttttggtaat
     2821 aatttaaata ggaatggcaa cgtaaatact acgattaatg caattaaaaa catatttgtc
     2881 cagtgtaaat acgtagaaat aaatccacct gataatgtac cgataactaa tgacaaggaa
     2941 taactgctcg tacttaagcc aaggtaagtc ttctggtcct ctttagaaag atactttgca
     3001 acatatatca catataatgt ctctgcagca gctaaaccgg cagtttgaat aatacgtcca
     3061 actaaaagta atgggaattg atgttggaaa atgtaaccaa taattgatcc gataatgatt
     3121 aatatcacgc cataaataaa tagtgtgcgt atactaatgg catcagataa tgaagcgtat
     3181 actacagcgc caataccaat tactaaaccg gctaatgtcg cttgccaact tactgtcgtt
     3241 acagatatgt ttaagtcatc agcaatggct acagaaatca atttaaatga gttgtctata
     3301 accaaactga atacaaataa gaataataaa ataggtactg ctttctttat tttagaatat
     3361 tcaacattca taatcatcta caccaatgac agtgcaattt caatcatatc tgtaaatgca
     3421 cgttcccttt cctcaggtgt tgttgacgtt tcatgaatta aatgatcgct cactgtgaac
     3481 acacctaatg cttcgacacc agcgtaaatt gcattcatgt ataatgcagc tgattccatt
     3541 tctacaccta aaatacccat acgcatccaa cgttcactcg ctgttgtatc cgcgttatag
     3601 aaaatatcac ttgataacac attacctaca tgatgacgta cacctttgtc acgtgctgtt
     3661 tcaactgctt tttctaataa ttgataagaa gcaattggcg caaaatgacc tggtaattga
     3721 tattgttgaa cgtaatttga atcagtagag gcaccttgtg caataatcac atcatataaa
     3781 tcaatgtttt cttgcatcgc gccacaagag ccaacgcgaa ttaatttttt acaaccaaat
     3841 gtatgaatta attcataaga gtaaatgcca atagatggca tacccatacc tgaacccatg
     3901 acagaaactt ttttaccttt atatgttccg gtaaaaccaa acatgtttcg cactgtattg
     3961 aactgttcca catcatccaa ataagtttct gcaatgaact tagctcttaa cggatctcct
     4021 ggcaatagaa ccgtttctgc aatttcgacg tcattcattg gtttaatgtg tggtgttgat
     4081 ttcataaaat attcctccca atatttgtat agtgatttgt ctatttgtct aaccatgtat
     4141 ataataatat tttttaaaag cgctttcaag cattacattt tgacaatatt aagaacattt
     4201 tacagttaca gctactaacc ttgtataaaa ctaattttca aagcctatct atatttaatt
     4261 tttataattt ttccaatttg agtaaaaatt attgtatgat gagagtgatt aagtaacttt
     4321 atggaggttg tctacgtgac gcaaacacaa ccaaaatttt taacgattta taatacgtta
     4381 tataaagaaa ttcaaatagg aaaatatccg agtggccatg cattacctac tgaaaaggaa
     4441 ctttgtgcgc gctttgatgt cagtcgtatg actttgcgcc aagctataaa attgttagcc
     4501 gaagatggca tcgtagagag tacaagaggg aagggacact ttgttattcc acaaacaaat
     4561 gcccaacacg cttcaagtat ggatcaattt aagcatccac ttgatcaaat attgctagct
     4621 cgcgtatcta tgtcatcaat taattatcgt gttgatttag aaagtgaata tacaaatcat
     4681 ttgtttgcaa accatccttc tgccgtcatt gcaatggaac gctattatca aaaaaaggac
     4741 aatcattcta agcaagctga tgcattttgc tttaccttta taccgttaaa tgtcattgac
     4801 acatttaaag tgaatacaca aaacgaagac gacatgaaga cattcgttga gcaaacgatt
     4861 tatagcaatg catatcaatc agatttaaaa atgtctatta ccaaagcgcc ccacttcaaa
     4921 aatcatagtc acgtgtttga tggtgataca cattgttggc tgattattga aacactgtac
     4981 gcacaaacac cttatccaat tatgattaat aagtggtata ttccacagga aatatctgaa
     5041 ttaacactga cacgtataag acaatcggat tattaaaaat tattaaaata taagaaattt
     5101 tttgatgact atttagggag ttggtaagaa atggaaaagc ttgttacaag cgcaatttca
     5161 ttcagtcaac tactgccaat ataacattag cgagcctagg acattgattt atgtcctagg
     5221 ctcgctcaga taatcacacg atttttctat tattaatcgt attatgttta tttatttgtt
     5281 gaacgtcgtc taaatgctaa gaataaccca gatactaata gtagtgcggc aatacttgca
     5341 gtaagaatac ttgatgtcat actttcacca gcagctggta aaactttttt gttactttgg
     5401 ttcatttgat gatttgatga atgcatattt gcttttggac tcatcatttg atggtttgat
     5461 gattgcatat gaccttgttg catgtgtggc tgttggttca tgtgtgtgtt ctgattcata
     5521 tggccttgtt gactcatatg acctgtttta ttttgcacca tttcactacc accatgatta
     5581 acaccatttg catctacatt cgtttgataa aaattgccat cttttgttaa aggtaacgca
     5641 tggccattca tatctctaac agcatgtggt ttaaataccc ctacattagt tgtaattatc
     5701 acattgtatt tatcagcaat attttgcgtc gcatcataca atttcatatt atagtcttgc
     5761 atattactgc cagcgcttaa ttggggtaaa gctttctcta attcagtata ttgtgcttgc
     5821 gtcattcctt gtggtactac tccgccataa ggacgatgat tttgtacatt ttggctttgt
     5881 ttattcgaca cattcattga agttgtgtcg gcatgcgcat tttgaaaagg catacttgag
     5941 aatactaaag tgcttgttac aattaaagaa cctactgttg ctaatttttt cattgtcttg
     6001 tccccttata ttacaatttg attacattta cattatcata cgattacaaa a
//
LOCUS       DALPQQ010000131         5953 bp    DNA     linear   BCT 22-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus strain K18-6-464
            SAMD00233528-rid16434743.denovo.132, whole genome shotgun sequence.
ACCESSION   DALPQQ010000131 DALPQQ010000000
VERSION     DALPQQ010000131.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMD00233528
            Sequence Read Archive: DRR236061
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 5953)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5953)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001543423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001543423.1
            Genome Coverage       :: 77x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/22/2022 17:09:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,811
            CDSs (total)                      :: 2,743
            Genes (coding)                    :: 2,689
            CDSs (with protein)               :: 2,689
            Genes (RNA)                       :: 68
            rRNAs                             :: 2, 4, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 4, 2 (16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 54
            CDSs (without protein)            :: 54
            Pseudo Genes (ambiguous residues) :: 0 of 54
            Pseudo Genes (frameshifted)       :: 27 of 54
            Pseudo Genes (incomplete)         :: 27 of 54
            Pseudo Genes (internal stop)      :: 10 of 54
            Pseudo Genes (multiple problems)  :: 10 of 54
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5953
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMD00233528-rid16434743.denovo.132"
                     /strain="K18-6-464"
                     /db_xref="taxon:1280"
                     /geo_loc_name="Japan: Niigata"
     gene            4..726
                     /locus_tag="O7798_002244"
     CDS             4..726
                     /locus_tag="O7798_002244"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001670189.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide ABC transporter permease"
                     /protein_id="HDC2864462.1"
                     /translation="MKLEFKKSISNKIIYTLVVLFTFLFLLGYFLPIGIDKVKSLSYS
                     QFFFSSYTVATQLGFLLFSFVIAYFINKEYSNKNILFYKLIGDNIFTFFYKKVAVLFF
                     ECLVFIILSITIISIIYSDFSHYLLLIILFSLVILQYILVVGTISMVSPNILISLGIS
                     IVYWIGSVILVAINKNIFGIVAPFEASNTMYRAVEKILNNESTFMCPTEIINIVSFFV
                     LLFIVNTIVLLLSRKRWLKIGM"
     gene            complement(886..1506)
                     /gene="srtA"
                     /locus_tag="O7798_002245"
     CDS             complement(886..1506)
                     /gene="srtA"
                     /locus_tag="O7798_002245"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501293.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class A sortase SrtA"
                     /protein_id="HDC2864463.1"
                     /translation="MKKWTNRLMTIAGVVLILVAAYLFAKPHIDNYLHDKDKDEKIEQ
                     YDKNVKEQASKDKKQQAKPQIPKDKSKVAGYIEIPDADIKEPVYPGPATPEQLNRGVS
                     FAEENESLDDQNISIAGHTFIDRPNYQFTNLKAAKKGSMVYFKVGNETRKYKMTSIRD
                     VKPTDVGVLDEQKGKDKQLTLITCDDYNEKTGVWEKRKIFVATEVK"
     gene            1700..2191
                     /locus_tag="O7798_002246"
     CDS             1700..2191
                     /locus_tag="O7798_002246"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501294.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetyltransferase"
                     /protein_id="HDC2864464.1"
                     /translation="MIRYAKKEDLNAILAIYNDAIINTTAVYTYEPQTIDERVAWFET
                     KQRKHEPIFVFEENGSVLGFATFGSFRPWPAYLYTIEHSIYVDASARGKGIASQLLHH
                     LIVEAKAKGYRALVAGIDASNKASIQLHQKFAFKHAGTLTNVGFKFNRWLDLAFYELD
                     LQD"
     gene            complement(2629..2799)
                     /locus_tag="O7798_002247"
     CDS             complement(2629..2799)
                     /locus_tag="O7798_002247"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501295.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDC2864465.1"
                     /translation="MLRLSIIFIAFIINTTITYGYTTEGTWVNLLFKSLSLSMIIVFM
                     FYYIRFVIEKKR"
     gene            complement(2861..2959)
                     /locus_tag="O7798_002248"
     CDS             complement(2861..2959)
                     /locus_tag="O7798_002248"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501296.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDC2864466.1"
                     /translation="MIKKKHLSGSLVPDRCFLIISEEVERFMENAY"
     gene            complement(2978..3877)
                     /gene="sdaAA"
                     /locus_tag="O7798_002249"
     CDS             complement(2978..3877)
                     /gene="sdaAA"
                     /locus_tag="O7798_002249"
                     /EC_number="4.3.1.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501297.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-serine ammonia-lyase, iron-sulfur-dependent,
                     subunit alpha"
                     /protein_id="HDC2864467.1"
                     /translation="MFDSIRETIDYAVENNMSFADIMVKEEMELSGKSRDEVRAQMKQ
                     NLDVMRDAVIKGTTGDGVESVTGYTGHDAAKLRDYNETHHALSGYEMIDAVKGAIATN
                     EVNAAMGIICATPTAGSSGTIPGALFKLEKTHDLTEEQMIDFLFTSALFGRVVANNAS
                     VAGATGGCQAEVGSASAMAAAAAVAIFGGSPEASGHAMALAISNLLGLVCDPVAGLVE
                     IPCVMRNAIGSGNALISADLALAGIESRIPVDEVIEAMDKVGRNLPASLRETGLGGLA
                     GTPTGEAIKRKIFGTAEDMVKNN"
     gene            complement(3891..4571)
                     /gene="sdaAB"
                     /locus_tag="O7798_002250"
     CDS             complement(3891..4571)
                     /gene="sdaAB"
                     /locus_tag="O7798_002250"
                     /EC_number="4.3.1.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501298.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-serine ammonia-lyase, iron-sulfur-dependent
                     subunit beta"
                     /protein_id="HDC2864468.1"
                     /translation="MAKSYDYQSAFDIIGPVMMGPSSSHTAGAVKIGNSARAILGDIP
                     KNIEIHYYESFAQTHQGHGTDVAIVGGAMGYSTFDNRIKSSLEIAADDGIKIDIIEEE
                     GDSIGQHPNCAYIKSSRNDGRYIEIIGISIGGGTIKIKGIHINGLEVDLNHGLPILVV
                     DGNMTKAQVNHFINDINDMKLDCKDEFIKIDEDKCLVVIPLNKAISESTLNTIKEKYS
                     DVNVSYIN"
     gene            complement(4574..5617)
                     /locus_tag="O7798_002251"
     CDS             complement(4574..5617)
                     /locus_tag="O7798_002251"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001551877.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS fructose transporter subunit IIC"
                     /protein_id="HDC2864469.1"
                     /translation="MDILLGVGTLVLVLVIMTLFLKYAPYGKQGLQALSGAACATFLP
                     QAFLSYAIGGVFDIKFLQDIGDLAGSLSGIAVGILTCLNLGVAPVFAVIVGLVLHDFK
                     LLPAFIAAYGVAFLIKWIEKKVPEGLDLIVVILFAPAIAFGLASIITPGVLATLKQIG
                     SAVTAVGDNNPYALAVILGLVIPVTGMTPLSSMVLTSLLGLTGVPMAIGALTCTGSSF
                     VNLILFRKLNIGGPSKAFAVCIEPLTQIDLIAQYPVQLYGTNALIGVVNACIVTFSGL
                     VIGVKGMATPIAGAIVLFGFNNAVTSIVTIATVIIVSIVLAYIIGTLINKFNLMNINF
                     KMPSKKNHIKESV"
BASE COUNT         1823 a         1128 c          889 g         2113 t
ORIGIN      
        1 actttgaaat tagaatttaa aaaaagtatt tccaataaaa ttatttacac gcttgttgtg
       61 ctattcacat tccttttctt acttgggtat tttttaccaa taggtataga caaagttaaa
      121 agtttaagct atagccagtt tttcttcagt tcatatactg ttgcaacgca attagggttc
      181 ttactatttt catttgttat tgcatatttt attaataaag agtattcgaa taaaaatatc
      241 ctgttttata aattgattgg cgataatatc tttaccttct tctataaaaa ggtagcagtg
      301 ttattttttg aatgtttagt gttcataatt ctaagtatca ctattatttc aattatatat
      361 tcggatttct cacattactt actattaata atcttatttt cactcgttat cttacaatat
      421 atcttagttg ttggaacgat tagtatggtt tcacctaaca ttttaatcag cttaggtatc
      481 agcattgtat attggattgg ttcagtcatc ttagttgcca ttaataaaaa tatatttggt
      541 atcgttgctc catttgaggc gagcaatacg atgtatcgtg ccgtagaaaa aatattgaat
      601 aacgagtcaa catttatgtg tcctactgaa attataaata tagtatcatt cttcgttctt
      661 ctatttatag ttaatactat tgtcttatta ctaagtagaa agagatggtt gaaaatcggt
      721 atgtagtata aaaaaggagc ggtatacatt gccgcttctt tttattatgt atttttacaa
      781 tctccaccaa tgacacgtcg tcattgctac ctcataccaa acaaaaaaca gtctcgcaat
      841 caagactgtt ttccactcaa tatattcatc cattagcgta atagattatt tgacttctgt
      901 agctacaaag attttacgtt tttcccaaac gcctgtcttt tcattgtaat catcacaagt
      961 aattaatgtt aattgtttat ctttaccttt ttgttcatct agaactccta catctgtagg
     1021 cttaacatct cttatacttg tcattttata cttacgtgtt tcattaccaa ctttaaagta
     1081 caccatacta ccttttttgg ctgctttaag atttgtaaat tgatagttcg gacggtcaat
     1141 gaaagtgtgt cctgcaattg aaatattttg atcatctagt gattcatttt cttctgcaaa
     1201 gcttacacct ctatttaatt gttcaggtgt tgctggtcct ggatatactg gttctttaat
     1261 atcagcatct ggaatttcaa tatagcctgc cactttcgat ttatctttcg gaatttgagg
     1321 tttagcttgc tgctttttat ctttactcgc ctgttctttt acatttttat catattgttc
     1381 aatcttttca tctttatctt tatcgtgaag ataattatcg atatgtggtt tagcaaacaa
     1441 atatgctgcc actaggataa gtaccacacc agcgattgtc attaatcgat ttgtccattt
     1501 tttcatacgt taaggctcct tttatacatt tcacaatgcc tgttaacatt tcatatagta
     1561 taccattaat ttcaaaatga ctcatagcaa ttcattttat actataaaat ttacatgtat
     1621 acttttacgt tagatttcat tacacatatt tgcattcaaa taacgaaacg cttttaataa
     1681 ttactaaggg ggaattgata tgattagata cgctaaaaaa gaggatttaa acgctatatt
     1741 agcgatatac aatgatgcca ttatcaatac tacagctgtt tatacttatg aaccacaaac
     1801 catagacgaa cgtgtcgcat ggtttgaaac gaaacaacgt aagcatgagc ctatctttgt
     1861 atttgaggaa aatggaagtg tcttagggtt tgcgacgttc ggttcattta gaccttggcc
     1921 agcataccta tatacaatcg aacattctat ttatgtcgat gcttcagcta gaggaaaagg
     1981 tattgctagt caattactac accatttaat tgtggaagca aaagctaaag gttatcgtgc
     2041 gctagttgca ggcattgatg cttccaacaa agcgagtatt cagttgcatc aaaagtttgc
     2101 ttttaagcat gccggcacac tgaccaatgt aggttttaaa tttaatagat ggttagattt
     2161 agcattttac gaattagatt tacaagacta gtaatgtttg aatcacataa tataaacaag
     2221 acaaccatgt taattccctt aacataacaa gccaacatat aaaattttaa acttctcagg
     2281 ggagtgggac agaaatgata aagagccact aatgatttat tatgtagtgg ttcttacaca
     2341 ttagccacag ctaatgtgta cttaaaaata ggaatacatg agtaaaactc atgcataaga
     2401 aatactaatt tctatagaaa aagtatttct ttatcgtcgt cccaccccaa ctcgcacatt
     2461 attgtaagct gacttttcgt cagcttctgt gttggggccc aaaaagcttg ttacaagcgc
     2521 attttcgttc agtcaactac tgccaatata actttgtaga gcatattaca ttgatttaca
     2581 ttgtcccttt tatttattct tttcaaatac tatccccata gctttgattt aacgcttttt
     2641 ctcaataaca aaacgaatat agtagaacat gaaaacgata atcatgctga gcgataaaga
     2701 tttaaataat agattgaccc acgttccctc agtcgtatat ccatatgtaa tcgttgtgtt
     2761 aatgatgaat gctataaaga tgattgatag tcttagcata tcatcactcc ttttaagtta
     2821 ttttagatat acgggggcgc ttttgcaatc actattttga ttagtatgca ttttccataa
     2881 atctttcaac ttcttcagag ataattaaga agcatctatc tggtactaat gatccagaca
     2941 gatgcttctt ttttatcaat attttattgt tatctcatta attattttta accatatctt
     3001 cagctgtgcc aaagatttta cgtttaattg cttcgccagt tggtgtgcct gctagtccac
     3061 ccaatccagt ttcacgtaat gatgcaggaa ggttacgacc aaccttatcc attgcttcaa
     3121 taacttcatc aacagggatt ctactttcaa tacctgctaa tgctaaatct gctgaaatta
     3181 aagcgttacc cgaaccaatt gcatttctca taacacaagg aatttcaaca agtccggcta
     3241 ctggatcaca aactaaacct aataaattac ttatcgctaa tgccatagcg tgcccggatg
     3301 cttctggtga tcctccgaat atagctactg ctgcagctgc ggccattgca gatgctgaac
     3361 caacttcagc ttggcagcca cctgttgcac cagctacact tgcattgttt gctacgacac
     3421 gcccaaacaa tgctgaagtg aataagaaat caatcatttg ctcttctgtt aaatcatgtg
     3481 ttttttctaa tttaaaaagt gcaccgggaa tggtacccga ggaaccagct gttggcgttg
     3541 cacaaataat acccatcgca gcattgactt catttgttgc aatggcacct ttgactgcgt
     3601 caatcatttc atatccagac aaagcatgat gtgtttcatt ataatcacgt agtttagcag
     3661 catcatgacc agtgtagccc gttacacttt caaccccatc acctgtcgtc cctttgatta
     3721 ctgcgtctcg catgacatct aaattttgtt tcatttgcgc tcgcacttca tcacgtgatt
     3781 taccgcttaa ttccatttct tctttaacca tgatatccgc aaatgacata ttattttcta
     3841 cggcataatc tatagtctct ctaattgaat caaacatgtt tattccccct ctaatttata
     3901 taggaaacgt ttacgtcact gtatttctct ttaattgtat ttaatgttga ttctgagatt
     3961 gctttattta atggtattac aaccaagcat ttatcttcat ctatcttaat aaattcatct
     4021 ttacagtcta atttcatatc gttgatatca ttgatgaaat gatttacttg tgctttagtc
     4081 atatttccgt caacaactaa aattggtaat ccatgattta aatctacttc tagtccattt
     4141 atatgaatac ctttaatttt aattgtacca ccaccgattg aaataccgat aatttcaatg
     4201 tagcgaccat cattacgaga tgatttgata taagcacagt ttggatgttg accaatacta
     4261 tcgccttctt cttcgatgat atctatttta ataccatcat cagctgcaat ttctaatgaa
     4321 gatttaattc ggttatcaaa tgttgaatat cccattgctc cacccacaat agcgacatct
     4381 gtaccatgtc cttggtgtgt ttgagcaaat gattcataat aatgtatttc aatattttta
     4441 ggaatatctc ccaatattgc gcgtgctgaa ttcccaatct ttactgcacc agccgtatga
     4501 gaacttgaag ggcccatcat aactggtccg ataatatcga aagcactttg ataatcatag
     4561 ctctttgcca taattaaaca ctctccttaa tatgattctt tttgctcggc attttaaagt
     4621 tgatattcat taaattaaac ttattaatta gtgttccaat aatataggct aagacaatgc
     4681 tgacaataat cactgttgcg attgttacaa ttgatgtcac tgcattatta aagccaaaca
     4741 atacgatggc gcctgcaatt ggtgttgcca tacctttgac acctattact agtccgctaa
     4801 atgtcacgat acatgcgttg acgaccccaa tcagtgcatt tgtaccatat agttgtactg
     4861 gatattgcgc tattaaatca atttgcgtca atggctcaat acaaactgca aatgcttttg
     4921 acggtccacc aatgtttaat tttcggaata aaataaggtt aacaaatgag ctacctgtac
     4981 atgttagtgc tccaatagcc ataggaacac ctgtcagtcc taataaactt gttaatacca
     5041 ttgaacttag cggtgtcata cctgtaacag gaatcactag tcctaaaatg accgctaatg
     5101 catatggatt gttatcacct accgcagtga cagcactacc tatttgtttt aatgttgcta
     5161 gcacaccagg tgtaatgatt gatgcaagtc cgaaagcaat tgctggtgca aataagatca
     5221 ccacaattaa gtccaagcct tctggaactt tcttttcaat ccatttaatt aaaaaagcta
     5281 cgccataagc tgcgatgaat gctggtaata atttaaagtc atgtaatact aaaccaacaa
     5341 tgaccgcaaa tactggtgca acgcctaagt ttaagcacgt tagaatacct actgcgatac
     5401 cgcttaaact tcctgctaaa tccccaatat cttgtagaaa tttaatatca aatacgccac
     5461 caatagcata acttaagaat gcttgtggta gaaatgtcgc acaagctgca ccggataatg
     5521 cttgtagtcc ttgtttaccg tacggtgcat actttaaaaa tagcgtcatg atcactaaaa
     5581 ccaagactaa tgtgcctaca cctaacagaa tatccatttc ccaaaaacct ctctctatgt
     5641 ttattttatt ttcagaccat aaacatcgta cacccttaag aaaacgtttt caacttttat
     5701 ctgttatcaa atcaaatatt taagtgaaat atttcatatt tgtgaaagat ttttaaaatg
     5761 gattgtttca aaaactactt atgttgtcgt taatatttac taattaactt tttactctat
     5821 atttcaaaca gttgtgtgac agttttttga taactttttt acatctgaaa gtaagtaata
     5881 tttctaaaaa cttttaatat ttatacactt tatctttcga gctatttatt ttttgttttt
     5941 gtgctgtgtt tat
//
LOCUS       DALPQQ010000132         5950 bp    DNA     linear   BCT 22-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus strain K18-6-464
            SAMD00233528-rid16434743.denovo.133, whole genome shotgun sequence.
ACCESSION   DALPQQ010000132 DALPQQ010000000
VERSION     DALPQQ010000132.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMD00233528
            Sequence Read Archive: DRR236061
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 5950)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5950)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001543423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001543423.1
            Genome Coverage       :: 77x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/22/2022 17:09:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,811
            CDSs (total)                      :: 2,743
            Genes (coding)                    :: 2,689
            CDSs (with protein)               :: 2,689
            Genes (RNA)                       :: 68
            rRNAs                             :: 2, 4, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 4, 2 (16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 54
            CDSs (without protein)            :: 54
            Pseudo Genes (ambiguous residues) :: 0 of 54
            Pseudo Genes (frameshifted)       :: 27 of 54
            Pseudo Genes (incomplete)         :: 27 of 54
            Pseudo Genes (internal stop)      :: 10 of 54
            Pseudo Genes (multiple problems)  :: 10 of 54
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5950
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMD00233528-rid16434743.denovo.133"
                     /strain="K18-6-464"
                     /db_xref="taxon:1280"
                     /geo_loc_name="Japan: Niigata"
     gene            51..1244
                     /gene="fmtA"
                     /locus_tag="O7798_002252"
     CDS             51..1244
                     /gene="fmtA"
                     /locus_tag="O7798_002252"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499550.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="teichoic acid D-Ala esterase FmtA"
                     /protein_id="HDC2864470.1"
                     /translation="MKFNKVKLVIHACVLLFIIISIALIFHRLQTKTHSIDPIHKETK
                     LSDNEKYLVDRNKEKVAPSKLKEVYNSKDPKYKKIDKYLQSSLFNGSVAIYENGKLKM
                     SKGYGYQDLEKGIKNTPNTMFLIGSAQKFSTGLLLKQLEEEHKININDPVSKYLPWFK
                     TSKPIPLKDLMLHQSGLYKYKSSKDYKNLDQAVKAIQKRGIDPKKYKKHMYNDGNYLV
                     LAKVIEEVTGKSYAENYYTKIGDPLKLQHTAFYDEQPFKKYLAKGYAYNSTGLSFLRP
                     NILDQYYGAGNLYMTPTDMGKLITQIQQYKLFSPKITNPLLHEFGTKKYPDEYRYGFY
                     AKPTLNRLNGGFFGQVFTVYYNDKYVVVLALNVKGNNEVRIKHIYNDILKQNKPYNTK
                     GVIVQ"
     gene            complement(1781..2059)
                     /gene="qoxD"
                     /locus_tag="O7798_002253"
     CDS             complement(1781..2059)
                     /gene="qoxD"
                     /locus_tag="O7798_002253"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499551.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome aa3 quinol oxidase subunit IV"
                     /protein_id="HDC2864471.1"
                     /translation="MKHTVGFIASIVLTLLAVYVTLYTSLTFHAKLTIIFGFAFVQAG
                     LQLLMFMHLTEGKDGRLQTFKVIFALVITLCFVVGTYWVMQGGHSSHL"
     gene            complement(2068..2673)
                     /gene="qoxC"
                     /locus_tag="O7798_002254"
     CDS             complement(2068..2673)
                     /gene="qoxC"
                     /locus_tag="O7798_002254"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499552.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome aa3 quinol oxidase subunit III"
                     /protein_id="HDC2864472.1"
                     /translation="MSHDTNTIDSRTHEGELNKLGFWIFITAEFALFGTLFATLLTLQ
                     HGGDYAGKMTTELFELPLVLIMTFALLFSSYTCGIAIYYMRQEKQKLMMFWMIITLLL
                     GLVFVGFEIYEFAHYASEGVNPTIGSYWSSFFILLGTHGCHVSLGIVWAICLLIQIQR
                     RGLDKYNAPKLFIVSLYWHFLDVVWVFIFTAVYMIGMVYSG"
     gene            complement(2663..4651)
                     /gene="qoxB"
                     /locus_tag="O7798_002255"
     CDS             complement(2663..4651)
                     /gene="qoxB"
                     /locus_tag="O7798_002255"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001010769.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome aa3 quinol oxidase subunit I"
                     /protein_id="HDC2864473.1"
                     /translation="MNFPWDQLLVKGNWMITMAQIGAPFLVIGLIAVITYFKLWKYLY
                     KEWFTSVDHKKIGIMYLICAVLMFVRGGIDALLIRAQLTVPDNKFLESNHYNEIFSTH
                     GVIMIIFMAMPFIFGLWNIVVPLQIGARDVAFPVLNNVSFWLFFAGMILFNLSFIIGG
                     SPAAGWTNYAPLAGEFSPGPGVNYYLIAIQISGLGTLATGINFFVTILRCKTPTMKFM
                     QMPMFTVTTFITTLIVILAFPPLTVALALMTTDRIFDTAFFTVAHGGMPMLWANFFWV
                     WGHPEVYIVILPAFGIYSEIIPTFARKRLFGHQSMVWATAGIAFLSFLVWVHHFFTMG
                     NGALINSFFSISTMLIGIPTGVKLFNWLLTLYKGRITFESPMLFSLAFIPNFLLGGVT
                     GVMLAMASADYQYHNTYFLVAHFHYTLVTGVVFACLAGLIFWYPKMMGYKLNETLNKW
                     CFWFFMIGFNVCFLPQFILGLDGMPRRLYTYMPSDGWFLLNLISTIGALLMAIGFLFL
                     VVSIVYSHFKSPREATGDNWDGLGRTLEWTTASAIPPKYNFAITPDWNDYDTFVDMKE
                     HGRHYLDNHNYKDIHMPNNTPVGFWIGIFMTIGGFFLIFETVIPALICLFGIFGTMIY
                     RSFQIDHGYHIPAAEVAETEARLREARIKEREAVSHES"
     gene            complement(4651..5751)
                     /gene="qoxA"
                     /locus_tag="O7798_002256"
     CDS             complement(4651..5751)
                     /gene="qoxA"
                     /locus_tag="O7798_002256"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499554.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome aa3 quinol oxidase subunit II"
                     /protein_id="HDC2864474.1"
                     /translation="MSKFKSLLLLFGTLILLSGCSNIEIFNAKGPVASSQKFLILYSI
                     VFMLVICFVVLGMFAIFIYKYSYNKNAESGKMHHNAIIETIWFVIPIIIVAALAIPTV
                     KTLYDYEKPPKSEKDPMVVYAVSAGYKWFFAYPDEHIETVNTLTIPKDRPVVFKLQAM
                     DTMTSFWIPQLGGQKYAMTGMTMNWTLEASQTGTFRGRNSNFNGEGFSRQTFKVNAVS
                     QKDYDKWVKEVKGKKTLDQDTFDKQLLPSTPNKALEFNGTHMAFVDPAADPEYIFYAY
                     KRFNFELKDPNFTSEENMFKDVSDKPLIPARKAQITNANYKRHGMKLMILGNDEPYNN
                     EFKKDESKNAKEMKKISKDAQDQDNDDHGGGH"
BASE COUNT         2123 a          962 c         1016 g         1849 t
ORIGIN      
        1 ttttaacgat ttaaatatat aaaatgaata cattgtgagg caattatcaa atgaaattta
       61 ataaagtaaa actagttata catgcgtgtg tactattatt tatcattatt tctatagcgt
      121 taatttttca tcgattacag acgaagacac attctataga cccaatacat aaggaaacaa
      181 aattatcaga caatgaaaaa tatttagtgg atcgtaataa ggaaaaggtt gcgccgtcta
      241 aactaaaaga ggtatataat agcaaggatc ctaaatataa gaaaattgac aagtatttac
      301 aaagttcatt atttaacggt tcagtagcta tatatgaaaa tggcaaattg aaaatgagta
      361 aaggttatgg atatcaagat cttgaaaaag gtattaaaaa cacaccgaat acgatgtttt
      421 taataggttc agctcaaaaa ttttcaacag ggttactgtt aaaacagtta gaagaagaac
      481 ataaaataaa tatcaatgat ccagtaagta aataccttcc atggtttaaa acatctaagc
      541 ctatcccatt gaaagattta atgttgcatc aaagtggatt atataaatat aaatcctcaa
      601 aagattataa aaatttagat caagcagtta aagcgattca aaaacgtggt attgatccta
      661 agaaatacaa aaagcatatg tataacgatg ggaattattt agtacttgcg aaagtaattg
      721 aagaagttac aggtaaatct tatgctgaga attattatac aaaaatagga gatcctttaa
      781 aacttcagca cacagcattt tatgatgaac aaccttttaa aaaatatcta gcaaaaggtt
      841 atgcttataa tagtacagga ctttcattct taagacctaa tattttggac caatactatg
      901 gtgcaggtaa tttatatatg acaccaacag atatgggtaa attaattact caaatacaac
      961 aatataaatt attcagtcct aaaataacca atccattatt acatgagttt ggtacgaaaa
     1021 agtatccaga tgaatatcga tatggtttct atgctaagcc aacattgaat agacttaacg
     1081 ggggattctt tggacaagtc tttactgttt actataatga taagtatgta gttgtacttg
     1141 cattaaatgt aaaaggaaac aatgaagttc gaatcaaaca tatttataat gatattttaa
     1201 aacaaaataa accttacaat acgaagggtg ttattgttca ataattaata tagaagatat
     1261 aacatgtata tggcattaag gcatcgacct tatctgacca gtatacgagt tatatcttct
     1321 tttttatagt ggtaaaaagt ttaaagtata aggttgaaga aggatgagtt taaaaatatg
     1381 tgttaactga taaaagggga aatcatttgg tgagttggca tcagactaaa atgaatgaag
     1441 acgaatacgt tggtccatgc gtggtgtgaa tgttttctaa atctaactgg aaatgataat
     1501 ttaataatgt acacttttga ttgtttaaac atgtacaatt tttaaaaacc tagggataat
     1561 tttattgacg tgaacaacat tgagattatc tttagacata aatatggatt ttgaagttac
     1621 tatatttatt agttgtggtt gttaatgtat taattgaatt gattataatg attgtcttat
     1681 aagatataga aggggactta accatttaaa aattgaagga aaataaaaac cagctaacaa
     1741 aagtgttagc tggttaaact ttacattatt aaaatgttgt ttataagtgt gaagagtgac
     1801 cgccttgcat aacccaatat gttccgacaa cgaaacaaag tgtaattaca agagcaaaga
     1861 taactttgaa tgtttgtaaa cgtccatctt taccttcagt taaatgcatg aacattaata
     1921 attgaagtcc tgcttggacg aatgcaaagc caaagataat tgtcaacttc gcgtggaatg
     1981 ttaatgacgt gtatagtgtt acgtaaactg ctaaaagcgt taatacgata gatgcgataa
     2041 atcctacagt atgtttcatt attgtactca tccgctatac accatcccta tcatatatac
     2101 ggcagtaaag atgaaaaccc aaacaacatc taagaagtgc cagtataaac ttactataaa
     2161 taattttggc gcattatatt tgtctaatcc gcgtcgttgg atttggatta ataaacaaat
     2221 ggcccaaacg atacctagcg atacgtgaca accatgcgtt cctaatagga taaagaaact
     2281 agaccagtaa gaaccaattg ttgggttaac gccttctgat gcatagtgtg cgaattcata
     2341 aatttcgaat ccaacaaaga ctaaacctaa aagtaacgta atgatcatcc aaaacatcat
     2401 taacttttgt ttttcttggc gcatgtagta aatagcaata ccacatgtgt aagaactgaa
     2461 taataatgca aacgtcatta ttaaaacaag aggcaattca aataactcag tagtcatttt
     2521 acctgcataa tcgccaccat gttgcaaagt taatagtgtc gcaaataggg taccgaataa
     2581 cgcaaattcg gctgtaatga aaatccaaaa gccaagctta tttaattcgc cttcatgtgt
     2641 gcgtgaatca atagtgtttg tatcatgact catgacttac agcctccctt tctttaatac
     2701 gcgcttctct taatctagct tcagtttctg caacttcagc agcagggata tgatatccgt
     2761 gatcgatttg gaaactgcga taaatcatag taccaaaaat accgaataaa caaattaatg
     2821 ctggaattac agtttcgaaa attaagaaga aaccgccgat agtcataaag ataccaatcc
     2881 agaatccaac aggagtattg tttggcatat gaatgtcttt gtaattatgg ttgtctaagt
     2941 aatgacgacc atgttctttc atatcaacaa atgtgtcgta gtcattccaa tctggtgtaa
     3001 tggcaaagtt gtatttaggt ggaattgctg atgcagtagt ccactctaga gtacgaccaa
     3061 ggccatccca gttatctcca gttgcttcac gtggagattt gaagtgactg tatacgatac
     3121 taacaacaag gaataagaat ccgattgcca ttaataatgc accgatagtt gaaattaagt
     3181 ttaataagaa ccaaccatct gatggcatat aagtgtataa acgacgtggc ataccatcta
     3241 atccaagaat gaattgtggt aagaaacaaa cgttaaatcc gatcatgaag aaccagaagc
     3301 accatttgtt taatgtttcg tttaatttgt aacccatcat ctttggatac cagaagatta
     3361 aaccagctaa gcaggcaaat acaacaccag taaccaatgt atagtggaag tgagctacta
     3421 agaagtacgt attgtgatat tgatagtcag ctgatgccat tgctaacatt acacccgtaa
     3481 caccacctaa aaggaagtta gggataaatg ctaatgagaa tagcattggt gactcaaatg
     3541 taatacgtcc tttatataat gttaataacc agttaaacaa tttcacacca gttggaatac
     3601 caatcagcat tgttgaaatt gagaagaatg agttgattaa cgcaccatta cccattgtga
     3661 agaaatggtg aacccaaact aagaaactaa ggaacgcgat accggcagtt gcccatacca
     3721 tactttgatg tccgaataaa cgcttacgag cgaatgtcgg gataatttct gagtaaatac
     3781 caaatgctgg aaggataacg atataaactt cagggtgccc ccatacccag aagaagttag
     3841 cccaaagcat tggcataccg ccatgtgcaa ctgtgaagaa tgctgtgtca aatattctat
     3901 cagttgtcat taatgctaac gctactgtta aaggagggaa agcaagaata acaattaatg
     3961 tagtaataaa tgttgttact gtaaacattg gcatttgcat aaacttcata gttggtgttt
     4021 tacatcttaa aattgttaca aagaagttga tacctgtagc taaggtacca agccctgaaa
     4081 tttgtatagc tattaagtaa tagttaacac ccggaccagg actgaattca cctgctagtg
     4141 gcgcatagtt tgtccaacca gctgctggtg aaccaccaat aataaatgac aggttgaata
     4201 aaatcatacc tgcaaagaat agccagaaac ttacgttgtt taatactggg aatgcaacat
     4261 cacgtgctcc aatttgtaat ggaacaacga tattccataa accaaagata aatggcattg
     4321 ccatgaagat aatcatgatt acaccatgtg tactaaaaat ttcgttatag tggttagatt
     4381 ctaaaaattt gttatcaggt actgttaatt gcgcacgaat aagtaacgca tcaataccac
     4441 cacggacgaa cattaatacg gcacagatta aatacataat accgattttc ttatggtcta
     4501 cagatgtgaa ccattctttg taaagatatt tccataattt aaagtaagta attactgcga
     4561 ttaaaccaat aactaagaat ggggcaccaa tttgtgccat tgtaatcatc cagttacctt
     4621 taactagtaa ttgatcccat ggaaaattca ttaatgtcca cctccatgat catcattgtc
     4681 ttgatcttgc gcatcttttg aaattttctt catttctttc gcatttttcg attcatcttt
     4741 cttgaactca ttgttatatg gttcgtcatt tccaagaatc atcaacttca taccatgtcg
     4801 tttatagttc gcatttgtaa tttgagcttt acgagcaggt attaatggtt tgtctgatac
     4861 atctttaaac atattttctt cactagtgaa gtttggatct ttcaattcga aattgaaacg
     4921 tttatatgca tagaagatgt attctggatc ggctgctgga tcaacaaacg ccatatgtgt
     4981 accattaaat tctaaagctt tattaggtgt gcttggtaat aattgtttat caaatgtatc
     5041 ttgatctaac gttttcttac ctttaacttc tttcacccat ttgtcgtagt ctttttgact
     5101 aacggcattt actttaaatg tttgacgtga gaatccttca ccattgaagt tagagttacg
     5161 acctctgaac gtaccagttt gagatgcttc taacgtccaa ttcattgtca tgccagtcat
     5221 ggcatatttt tgaccaccta attgtggaat ccagaaactt gtcattgtat ccatagcttg
     5281 aagcttaaat acaacaggac gatctttagg gattgttaat gtattaacag tctctatatg
     5341 ttcatctgga taagcaaaga accatttgta tcctgcactt actgcatata caaccattgg
     5401 atctttctca ctcttcggtg gtttttcgta atcgtataaa gttttaactg taggaatagc
     5461 taaagcagca acgattatga taggtattac aaaccatatt gtttcaatga tggcattatg
     5521 gtgcatctta ccagattcgg cattcttatt ataactatac ttgtaaataa aaatggcgaa
     5581 catgccaagt acaacgaaac aaataacaag catgaagacg attgaataaa gaatcaagaa
     5641 cttctgacta cttgctactg gcccttttgc gttgaaaatt tctatatttg aacaaccact
     5701 aagtaaaatt agtgtgccaa ataatagaag caaagactta aattttgaca cttttttgac
     5761 ctcctaatac tacaaatgta gggcttaaca ttaattttaa gttattacac aatatttaca
     5821 agggcttatg ggaaaaaaat taataaaatt gtatcaaaaa tgttgataaa tcaaggtgtg
     5881 acgtgggttc acacatttgt taaaattatg tgtacatttt gtgactaata gcgtttttga
     5941 aaaaattgct
//
LOCUS       DALPQQ010000133         5754 bp    DNA     linear   BCT 22-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus strain K18-6-464
            SAMD00233528-rid16434743.denovo.134, whole genome shotgun sequence.
ACCESSION   DALPQQ010000133 DALPQQ010000000
VERSION     DALPQQ010000133.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMD00233528
            Sequence Read Archive: DRR236061
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 5754)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5754)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001543423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001543423.1
            Genome Coverage       :: 77x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/22/2022 17:09:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,811
            CDSs (total)                      :: 2,743
            Genes (coding)                    :: 2,689
            CDSs (with protein)               :: 2,689
            Genes (RNA)                       :: 68
            rRNAs                             :: 2, 4, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 4, 2 (16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 54
            CDSs (without protein)            :: 54
            Pseudo Genes (ambiguous residues) :: 0 of 54
            Pseudo Genes (frameshifted)       :: 27 of 54
            Pseudo Genes (incomplete)         :: 27 of 54
            Pseudo Genes (internal stop)      :: 10 of 54
            Pseudo Genes (multiple problems)  :: 10 of 54
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5754
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMD00233528-rid16434743.denovo.134"
                     /strain="K18-6-464"
                     /db_xref="taxon:1280"
                     /geo_loc_name="Japan: Niigata"
     gene            complement(165..253)
                     /locus_tag="O7798_002257"
     tRNA            complement(165..253)
                     /locus_tag="O7798_002257"
                     /product="tRNA-Ser"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(216..218),aa:Ser,seq:gga)
     gene            complement(308..379)
                     /locus_tag="O7798_002258"
     tRNA            complement(308..379)
                     /locus_tag="O7798_002258"
                     /product="tRNA-Glu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(344..346),aa:Glu,seq:ttc)
     gene            complement(381..455)
                     /locus_tag="O7798_002259"
     tRNA            complement(381..455)
                     /locus_tag="O7798_002259"
                     /product="tRNA-Asn"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(421..423),aa:Asn,seq:gtt)
     gene            complement(470..543)
                     /locus_tag="O7798_002260"
     tRNA            complement(470..543)
                     /locus_tag="O7798_002260"
                     /product="tRNA-Gly"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(509..511),aa:Gly,seq:tcc)
     gene            complement(559..634)
                     /locus_tag="O7798_002261"
     tRNA            complement(559..634)
                     /locus_tag="O7798_002261"
                     /product="tRNA-His"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(599..601),aa:His,seq:gtg)
     gene            complement(648..720)
                     /locus_tag="O7798_002262"
     tRNA            complement(648..720)
                     /locus_tag="O7798_002262"
                     /product="tRNA-Phe"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(685..687),aa:Phe,seq:gaa)
     gene            complement(737..812)
                     /locus_tag="O7798_002263"
     tRNA            complement(737..812)
                     /locus_tag="O7798_002263"
                     /product="tRNA-Asp"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(777..779),aa:Asp,seq:gtc)
     gene            complement(834..907)
                     /locus_tag="O7798_002264"
     tRNA            complement(834..907)
                     /locus_tag="O7798_002264"
                     /product="tRNA-Met"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(871..873),aa:Met,seq:cat)
     gene            complement(1379..1933)
                     /locus_tag="O7798_002265"
     CDS             complement(1379..1933)
                     /locus_tag="O7798_002265"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500457.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine hydrolase family protein"
                     /protein_id="HDC2864475.1"
                     /translation="MTDVIIVHSMHGNSRNHWYQWLEHNLTLEGYDVTLFNFESPEAK
                     TVDQWIEAMTKQINVRKKDTYFVTHGLGSITALKYIEMIDQPIEGFFSIAGFKEDAEN
                     IDLDIDLSNVTIDYDNIKKKVDNFYGLSSKNDKYVSYKETQRLMNALEGNLRIVEDGG
                     HFLEEDGFETFTALQDRMQDYMTR"
     gene            complement(2256..3656)
                     /locus_tag="O7798_002266"
     CDS             complement(2256..3656)
                     /locus_tag="O7798_002266"
                     /EC_number="1.3.3.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500459.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protoporphyrinogen oxidase"
                     /protein_id="HDC2864476.1"
                     /translation="MTKSVAIIGAGITGLSSAYFLKQQDPNIDVTIFEASNRPGGKIQ
                     SYRKDGYMIELGPESYLGRKTIMTELAKDIGLEQDIVTNTTGQSYIFAKNKLYPIPGG
                     SIMGIPTDIKPFVTTKLISPLGKLRAGFDLLKKPTQMQDGDISVGAFFRARLGNEVLE
                     NLIEPLMGGIYGTDIDKLSLMSTFPNFKEKEEAFGSLIKGMKDEKNKRLKQRQLYPGA
                     PKGQFKQFKHGLSSFIEALEQDVKNKGVTIRYNTSVDDIITSQKQYKIVYNDQLEEVY
                     DGVLVTTPHQVFLNWFGQDPAFDYFKTMDSTTVATVVLAFDEKDIENTHDGTGFVIAR
                     TSDTDITACTWTSKKWPFTTPEGKVLIRAYVGKPGDTVVDDHTDNELVSIVRRDLSQM
                     MTFKGDPEFTIVNRLPKSMPQYHVGHIQQIRQIQAHIKQTYPRLRVTGASFEAVGLPD
                     CITQGKVAAEEVIAEL"
     gene            complement(3680..4603)
                     /gene="hemH"
                     /locus_tag="O7798_002267"
     CDS             complement(3680..4603)
                     /gene="hemH"
                     /locus_tag="O7798_002267"
                     /EC_number="4.98.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500460.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ferrochelatase"
                     /protein_id="HDC2864477.1"
                     /translation="MTKKMGLLVMAYGTPYKESDIEPYYTDIRHGKRPSEEELQDLKD
                     RYEFIGGLSPLAGTTDDQADALVSALNKAYADVEFKLYLGLKHISPFIEDAVEQMHND
                     GITEAITVVLAPHYSSFSVGSYDKRADEEAAKYGIQLTHVKHYYEQPKFIEYWTNKVN
                     ETLAQIPEEEHKDTVLVVSAHSLPKGLIEKNNDPYPQELEHTALLIKEQSNIEHIAIG
                     WQSEGNTGTPWLGPDVQDLTRDLYEKHQYKNFIYTPVGFVCEHLEVLYDNDYECKVVC
                     DDIGANYYRPKMPNTHPLFIGAIVDEIKSIF"
     gene            complement(4661..5698)
                     /gene="hemE"
                     /locus_tag="O7798_002268"
     CDS             complement(4661..5698)
                     /gene="hemE"
                     /locus_tag="O7798_002268"
                     /EC_number="4.1.1.37"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500461.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="uroporphyrinogen decarboxylase"
                     /protein_id="HDC2864478.1"
                     /translation="MVHNKNNTILKMIKGEETSHTPVWFMRQAGRSQPEYRKLKEKYS
                     LFDITHQPELCAYVTHLPVDNYHTDAAILYKDIMTPLKPIGVDVEIKSGIGPVIHNPI
                     KTIQDVEKLSQIDPERDVPYVLDTIKLLTEEKLNVPLIGFTGAPFTLASYMIEGGPSK
                     NYNFTKAMMYRDEATWFALMNHLVDVSVKYVTAQVEAGAELIQIFDSWVGALNVEDYR
                     RYIKPHMIRLISEVKEKHDVPVILFGVGASHLINEWNDLPIDVLGLDWRTSINQAQQL
                     GVTKTLQGNLDPSILLAPWNVIEERLKPILDQGMENGKHIFNLGHGVFPEVQPETLRK
                     VSEFVHTYTQR"
BASE COUNT         1764 a         1177 c          859 g         1954 t
ORIGIN      
        1 attcatcaaa aattagtcac attgtggcta aaaaatttta aatggatata aataaataag
       61 aagtgtaaaa atgaggataa tagctcaaat gcagatatat caagggattg agtccaaaat
      121 aaaaatagcg cttaaaatgg gtaaaaccaa tttaagcgcc tttacggaag gtaagggatt
      181 cgaacccttg agacgcttgt gacgcctaca cactttccag gcgtgctcct tcggccagct
      241 cggacaacct tcctcaacaa taaatatgta ataaaaaaac agaagcgata tttcacttct
      301 gcttgtatga ctcctacggg actcgaaccc gtgttaccgc cgtgaaaggg cggtgtctta
      361 accgcttgac caaggagcca tggctccaca ggtaggactc gaacctacga ccgatcggtt
      421 aacagccgat agctctacca ctgagctact gtggaataat agaaaataat ggagcgggtg
      481 atgggaatcg aacccacaac atcagcttgg aaggctgagg ttttgccatt aaactacacc
      541 cgctaatgta aacgattatg gggcggctga aggggatcga accctcgaat gtcggaacca
      601 caatccgatg tgttaaccac ttcaccacaa ccgccatgaa ttaagaatgg ttcaggacag
      661 agtcgaactg ccgacacatg gagcttcaat ccattgctct accaactgag ctactgaacc
      721 gtaatggtaa taataatggc ggtctcgacg ggaatcgaac ccgcgatctc ctgcgtgaca
      781 ggcaggcgtg ttaaccgcta cactacgaga cctattaaat taaaaactat gtattgcggg
      841 aggcggattt gaaccaccga ccttcgggtt atgagcccga cgagctaccg aactgctcca
      901 tcccgcgcta atattatttt gaattaccta attaatatac cataatcaaa aacctaaagt
      961 caagaacttt ttgaatttaa tttaaatgtt atctcttaaa taattactta aatatcgtag
     1021 caacatgttc tctgttgaac acaaatatta gtatattcat ttttgtagtg tacgtcaacg
     1081 acattttcaa agttttttgt gtaaaaaaac gcttcttatt cccttttatc atataagtgt
     1141 ctaatagttg tcataaatag tgttaaagca tttaaaaagg tataggagtt ataaagttta
     1201 caacgcctat accttctgaa aaagaaatta taaaagcttg ttacaccgca tattctttca
     1261 gtcagcgact accaatataa cattgtagcc ctaagacatt gcttgacgcc tcaattacaa
     1321 caatttttca aaatcagcag ctacctactg acacaacata acacaaccca tacactaact
     1381 atcgtgtcat gtaatcttgc atccgatctt gcaacgctgt aaatgtttcg aagccatcct
     1441 cttctaagaa gtgccctcca tcttccacga ttcgcaagtt cccctctaat gcattcatta
     1501 aacgctgggt ctctttatat gaaacgtatt tgtcattttt agaactcaat ccgtaaaaat
     1561 tgtcaacttt ctttttaata ttatcgtaat caatggttac attacttaaa tcaatatcta
     1621 aatctatatt ttctgcatct tctttaaagc ccgctatact gaaaaagcct tcaatcggct
     1681 gatcaatcat ttcaatatat tttaaagctg tgattgaacc taaaccatgt gttacaaaat
     1741 atgtatcctt tttgcgtaca ttaatttgtt tcgtcatagc ttcaatccac tgatccactg
     1801 tcttcgcttc aggggattca aaattaaata atgttacgtc atatccttct aaagttaagt
     1861 tatgctccaa ccactgatac caatgatttc tactatttcc atgcatagaa tgtacaataa
     1921 ttacatctgt catctcattc tctcctttca acttactact tcttttctat ttttaaaaaa
     1981 atgactgatt acctataatt gtaaaataaa aacaccttaa ttagaaatgt tatatcgcaa
     2041 agtgacattt ctaattaaag tgtattgtca tcatttcaat atcattcaaa aacagctaaa
     2101 cctttgtctc tgtttcaatt tcacaaaaat aattcccgct gaaagtatct atatttacac
     2161 attacttcca ccattatata acttaaaaat gactatattt catcaaacat tatctaaagg
     2221 cgtcgcacct acaccaacac catccaacaa ttaacttaca actctgcgat tacttcttca
     2281 gcagcaactt taccttgcgt aatacaatca ggtagtccaa ccgcttcaaa agatgcacca
     2341 gttactctaa gtcgtggata tgtttgttta atatgtgctt gaatctgtct aatttgttga
     2401 atatgaccga catggtactg tggcatactt ttcggcaaac gattgacaat tgtaaattca
     2461 ggatcacctt taaatgtcat catttgactt aaatctctac gtacaatcga tactaattca
     2521 ttatctgtat gatcatcaac cacagtatca cctggtttac ctacatacgc acgaatcaaa
     2581 accttacctt ccggtgtagt aaatggccat tttttcgatg tccaagtaca tgcggtaatg
     2641 tctgtatcac tcgttctcgc aattacgaag ccagtaccat catgggtatt ttcaatgtct
     2701 ttttcatcaa atgccaatac aacagttgca acagtcgtac tatccatcgt tttaaagtaa
     2761 tcaaatgctg gatcttgtcc gaaccaattt aaaaacactt gatgtggtgt cgttactaat
     2821 acgccatcat acacttcttc tagttgatca ttgtaaacaa ttttatattg tttttgagat
     2881 gtaattatat catccactga cgtattgtag cgtattgtca cacctttatt tttaacatct
     2941 tgttctaatg cttcaataaa tgagcttaaa ccatgcttaa attgtttgaa ttgtcctttc
     3001 ggtgcgccag gatataattg tctttgtttc agacgcttat ttttctcatc cttcatacct
     3061 tttatcagac ttccgaatgc ctcttctttt tctttaaaat taggaaacgt actcatcaaa
     3121 cttaatttat caatatcggt accataaata ccacccatta aaggctctat taaattctca
     3181 agtacctcat tacctaatct tgctctgaaa aatgcaccaa cagaaatgtc accatcctgc
     3241 atttgagtag gtttttttaa taaatcaaac cctgctctta atttaccaag tggcgatatt
     3301 aattttgtag taacaaatgg tttaatatct gttggaatac ccataattga accacctgga
     3361 atcggatata atttattttt cgcaaaaata tatgattgtc cagtcgtatt tgtaacaata
     3421 tcttgttcta atccaatatc tttcgctaat tctgtcataa tcgtttttct acctaaataa
     3481 gattcaggcc ctagttcaat catataacca tctttacgat acgattgaat ctttcccccc
     3541 ggacgattcg atgcttcaaa gatggttaca tcaatattag gatcttgctg ttttaaaaaa
     3601 tatgcacttg ataaacctgt tatccccgct cctataatag ccactgattt agtcacaacg
     3661 tttcacgctt ctttcgtcat taaaatatag acttgatttc atcaacaatt gcaccgataa
     3721 ataatggatg tgtattcggc atttttggac gataataatt cgcaccaata tcatcgcaaa
     3781 ctactttaca ttcataatca ttgtcataaa gcacctctaa atgctcacat acaaaaccta
     3841 ctggcgtata tataaagttt ttatactgat gtttttcata taaatcacgt gttaaatctt
     3901 gtacatctgg ccctaaccaa ggtgtacctg tattaccttc agattgccaa ccaatcgcga
     3961 tatgttcaat attagattgt tctttaatta aaagcgcagt atgttctagt tcttgtggat
     4021 atggatcatt attcttttcg attaaacctt ttggcaaact atgtgccgaa acaactaata
     4081 ccgtgtcttt atgttcctct tccggtattt gagctaatgt ttcgttgact ttattcgtcc
     4141 aatattcaat aaatttaggt tgttcataat aatgtttcac atgtgtaagt tgaataccat
     4201 attttgcagc ttcttcatca gcacgtttgt catatgatcc tactgaaaat gaagaataat
     4261 gtggtgctag tactaccgtg attgcttcag taatgccatc attgtgcatt tgttcaaccg
     4321 catcttcgat aaatggtgaa atgtgtttta atcctaagta tagtttaaat tcaacatctg
     4381 catatgcttt atttaatgct gaaactagcg catcagcctg gtcatctgtt gtacctgcta
     4441 atggtgataa accacctata aattcatatc tatctttcaa atcttgaagt tcttcttcag
     4501 atggacgttt accatgtcta atatctgtat aatatggctc tatgtcactt tctttataag
     4561 gtgtgccata agccataact aataatccca tttttttagt cattgataat accttccttt
     4621 aaatgaatta tctttcatgt gcttcaatgt aaaactatga ttatctttgt gtatatgtgt
     4681 gtacgaattc gcttacttta cgtaacgtct ctggttgcac ttctgggaat acaccgtgtc
     4741 ctaaattaaa gatgtgttta ccgttctcca taccttgatc taatattggt ttcaatctct
     4801 cttcaatgac attccatggt gctaataaaa ttgatggatc taaattccct tgtaatgttt
     4861 tagtaacgcc taattgttga gcctgattaa tagacgttct ccaatctagg cctaatacat
     4921 caatcggtaa atcattccat tcattgatta aatgactggc acctacaccg aataaaatta
     4981 ccggcacatc atgtttttct ttaacctcac tgattaatcg aatcatatgt ggtttaatgt
     5041 aacgtctgta atcctcgaca tttaatgcac ctacccatga atcgaaaatt tgaatcaatt
     5101 cggcacctgc ttcgacttga gctgttacat atttaacaga tacatcaact aaatgattca
     5161 ttaaagcaaa ccatgttgct tcatctctat acatcatcgc ttttgtaaaa ttgtaatttt
     5221 tcgatggtcc gccttcaatc atatatgacg ctaatgtaaa tggtgcccca gtaaatccta
     5281 ttagcggcac atttaacttt tcttctgtta aaagtttaat tgtatctaat acatatggta
     5341 catctcgttc ggggtctatt tgagaaagtt tctcaacatc ttgaattgtt ttgattggat
     5401 tatgaatcac tggaccaata cccgatttaa tttctacatc gacaccaatt ggctttaatg
     5461 gtgtcataat atctttgtat aaaattgctg catctgtatg ataattatca actggtaaat
     5521 gtgttacata agcgcacaac tccggctgat gtgtaatatc gaatagtgaa tatttttctt
     5581 tcaattttcg atattctggt tgcgaacggc cagcttgtcg cataaaccaa acaggtgtat
     5641 gtgatgtttc ttcacctttg atcattttta aaattgtatt gtttttatta tgcaccataa
     5701 aggcctccta aattaaaatc attcttatct atattatcat atcgctcatt cgtt
//
LOCUS       DALPQQ010000134         5740 bp    DNA     linear   BCT 22-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus strain K18-6-464
            SAMD00233528-rid16434743.denovo.135, whole genome shotgun sequence.
ACCESSION   DALPQQ010000134 DALPQQ010000000
VERSION     DALPQQ010000134.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMD00233528
            Sequence Read Archive: DRR236061
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 5740)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5740)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001543423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001543423.1
            Genome Coverage       :: 77x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/22/2022 17:09:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,811
            CDSs (total)                      :: 2,743
            Genes (coding)                    :: 2,689
            CDSs (with protein)               :: 2,689
            Genes (RNA)                       :: 68
            rRNAs                             :: 2, 4, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 4, 2 (16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 54
            CDSs (without protein)            :: 54
            Pseudo Genes (ambiguous residues) :: 0 of 54
            Pseudo Genes (frameshifted)       :: 27 of 54
            Pseudo Genes (incomplete)         :: 27 of 54
            Pseudo Genes (internal stop)      :: 10 of 54
            Pseudo Genes (multiple problems)  :: 10 of 54
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5740
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMD00233528-rid16434743.denovo.135"
                     /strain="K18-6-464"
                     /db_xref="taxon:1280"
                     /geo_loc_name="Japan: Niigata"
     gene            <1..432
                     /locus_tag="O7798_002269"
     CDS             <1..432
                     /locus_tag="O7798_002269"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000277741.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HDC2864479.1"
                     /translation="YRNDRYGFKRDFKLYECDDCSACSLRQQCMKPNSKSNKKIMKNY
                     NWEYFKVQINQKLSEPETKKIYSQRKIDVEPVFGFMKAILGLTRTSVRGINKVKRELG
                     FVLMALNIRKIAAQRAVHYKIHIKKADFYQIINRNQLFYIA"
     gene            complement(495..1328)
                     /locus_tag="O7798_002270"
     CDS             complement(495..1328)
                     /locus_tag="O7798_002270"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500408.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aldo/keto reductase"
                     /protein_id="HDC2864480.1"
                     /translation="MEVKTFYNGNTMPQIGLGTFRVENDENCMESVKYAIEQGYRSID
                     TAKVYGNEEQVGAGIRAGLESTGIAREDLFITSKLYFEDFGRENVAAAYEASLSRLGL
                     KYLDLYLVHWPGTNEAVMVDTWKGMEDLYKNNNVKNIGVSNFEPEHLEALLAQVSIKP
                     VINQVEYHPYLTQHKLKLYLAAQRIVMESWSPLMNAQILNDETIKDIAQELGKSPAQV
                     VLRWNVQHAVVTIPKSVTPNRISENFQIFDFELSDEQMTRIDGLNQDKRIGPDPKKFE
                     G"
     gene            complement(1540..2448)
                     /locus_tag="O7798_002271"
     CDS             complement(1540..2448)
                     /locus_tag="O7798_002271"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500409.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NERD domain-containing protein"
                     /protein_id="HDC2864481.1"
                     /translation="MDLSSPIVIGLIIAVVIALIFFVLFLVALGSKKKVKRQTEEKYE
                     QQEQNIKKSHEEALEKERIQNKKTITKQQEDYNHMVSTKDREIDALKLFSKNHSEYVT
                     DMRLIGIRERLVKEKRIRPEDMHIMANIFLPKDGFNNIERISHLVLTRTGLYIIDSQL
                     LKGHVYNGISGGQFKDLPPMEQVFDTLDLDKSRPQTIVMDQNDDKRSLSFVNYSDQIE
                     AIKQLAEDLQKELGAKYTPTSILYFNLKNEGDVTISNYNQNSAVKVLVGAEQLDEFFN
                     KFVFHGRIQYNVEDLQQMMDKIESFN"
     gene            complement(2573..3766)
                     /locus_tag="O7798_002272"
     CDS             complement(2573..3766)
                     /locus_tag="O7798_002272"
                     /EC_number="2.5.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500410.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methionine adenosyltransferase"
                     /protein_id="HDC2864482.1"
                     /translation="MLNNKRLFTSESVTEGHPDKIADQVSDAILDAILKDDPNARVAC
                     ETTVTTGMALIAGEISTTTYVDIPKVVRETIKEIGYTRAKYGYDYETMAILTAIDEQS
                     PDIAQGVDKALEYRDKDSEEEIEATGAGDQGLMFGYATNETETYMPLAIYLSHQLAKR
                     LSDVRKDGTLNYLRPDGKVQVTVEYDENDNPVRIDTIVVSTQHAEDVTLEQIQEDIKA
                     HVIYPTVPENLINEQTKFYINPTGRFVIGGPQGDAGLTGRKIIVDTYGGYARHGGGCF
                     SGKDPTKVDRSAAYAARYVAKNIVAAGLADQCEVQLAYAIGVAEPVSIAIDTFGTGKV
                     SEGQLVEAVRKHFDLRPAGIIKMLDLKQPIYKQTAAYGHFGRTDVLFPWEKLDKVEEL
                     KDAVK"
     regulatory      complement(3872..3982)
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00162"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="SAM riboswitch class I; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /bound_moiety="S-adenosylmethionine"
                     /db_xref="RFAM:RF00162"
     gene            4137..5729
                     /gene="pckA"
                     /locus_tag="O7798_002273"
     CDS             4137..5729
                     /gene="pckA"
                     /locus_tag="O7798_002273"
                     /EC_number="4.1.1.49"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500411.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoenolpyruvate carboxykinase (ATP)"
                     /protein_id="HDC2864483.1"
                     /translation="MSVDTYTETTKIDKLLKKPTSHFQLSTTQLYNKILDNNEGVLTE
                     LGAVNASTGKYTGRSPKDKFFVSEPSYRDNIDWGEINQPIDEETFLKLYHKVLDYLDK
                     KDELYVFKGYAGSDKDTMLKLTVINELAWHNLFAKNMFIRPESKEEATKIKPNFTIVS
                     APHFKADPEVDGTKSETFVIISFKHKVILIGGTEYAGEMKKGIFSVMNYLLPMQDIMS
                     MHCSANVGEKGDVALFFGLSGTGKTTLSADPHRKLIGDDEHGWNKNGVFNIEGGCYAK
                     AINLSKEKEPQIFDAIKYGAILENTVVAEDGSVDFEDNRYTENTRAAYPINHIDNIVV
                     PSKAAHPNTIIFLTADAFGVIPPISKLNKDQAMYHFLSGFTSKLAGTERGVTEPEPSF
                     STCFGAPFFPLHPTVYADLLGELIDLHDVDVYLVNTGWTGGKYGVGRRISLHYTRQMV
                     NQAISGKLKNAEYTKDSTFGLSIPVEIEDVPKTILNPINAWSDKEKYKAQAEDLIQRF
                     EKNFEKFGEKVEHIAEKGSFNK"
BASE COUNT         1876 a         1045 c          885 g         1934 t
ORIGIN      
        1 taccgtaatg atagatatgg ttttaaacga gacttcaaac tatatgaatg cgatgactgt
       61 tcagcatgtt ctttgaggca acaatgcatg aaaccaaatt caaaatccaa taagaaaatc
      121 atgaagaatt ataattggga atactttaaa gtccaaatta atcaaaagct ttctgaacca
      181 gaaacgaaaa aaatctatag tcaaagaaaa attgatgtag agcctgtttt tggatttatg
      241 aaggctattt tgggtttaac tcgaacgtca gttcgaggaa taaataaagt taaacgagag
      301 ctaggttttg tattaatggc acttaatata aggaaaatag cagctcaacg agctgtacat
      361 tataaaatac atatcaaaaa agctgatttc tatcaaataa ttaatagaaa tcagcttttt
      421 tacattgcct aagaacttaa tgtcccaagc cctgacaatt catctaacct tttcatcagt
      481 tgagcgattt taatctagcc ttcaaatttt tttggatcag gtccaattct cttatcttga
      541 tttaaaccat caattcgcgt catttgttca tctgataatt cgaaatcaaa tatttggaaa
      601 ttttcagaga ttctgtttgg tgtcaccgat ttagggattg taaccacagc atgctgcaca
      661 ttccatctta aaacaacttg ggcaggtgac tttcctaatt cttgagcaat gtctttaatt
      721 gtctcatcat ttaaaatttg tgcattcatc aatggtgacc aagattccat cacgatacgt
      781 tgtgctgcca aatataattt caatttatgt tgggttaaat atggatgata ttcaacttga
      841 ttaattacag gtttaattga cacttgtgcc aacaaagctt ccaaatgttc aggttcaaaa
      901 ttgctgacac ctatattttt aacattatta tttttatata aatcttccat acctttccat
      961 gtatcaacca ttacggcttc gttcgtacct ggccaatgta ctagatacaa atctaagtat
     1021 tttaaaccta atctagataa actagcttcg taagcagctg ctacattttc acgaccgaaa
     1081 tcctcaaaat ataattttga agtaataaat aagtcttctc tagcaatacc agttgactcc
     1141 aatccggcac gaatgccagc acctacttgt tcttcattcc cataaacttt tgcggtatca
     1201 atactacgat atccttgttc aatggcatac ttaacacttt ccatgcaatt ttcatcattt
     1261 tccacacgaa atgtccctaa accaatttgt ggcatcgtgt ttccattata aaatgtttta
     1321 acctccataa atatcgcctc acctttttga tgtattatac cctgttatca taacaaatct
     1381 gagttgaata catgagaaaa aacacttaga gcaatcaacc actaaaattc tagtaatatc
     1441 tctcaaatat taatcaaatt gtaaaagtaa ttctgtttaa tttatgacaa actaaaaaag
     1501 ccgaagtaac aacatatagt catcacttca gcctaacatt taattgaatg attcaatttt
     1561 atccatcatt tgttgtaagt cttccacgtt gtattgaata cgaccatgga atacaaattt
     1621 gttaaagaac tcgtctaatt gttcagcacc gacaagcact ttgacagcac tattttgatt
     1681 ataatttgaa atcgttacat cgccttcatt tttaagatta aagtataaaa ttgaagttgg
     1741 tgtatatttg gcacctaatt ctttttgtaa gtcttcagcc aattgtttaa tcgcctcaat
     1801 ttgatctgaa taatttacaa atgataatga acgtttgtca tcattttgat ccatcacaat
     1861 agtttgcggt ctagatttat ctaaatccaa tgtatcaaat acttgttcca ttggtggtaa
     1921 atctttaaat tgaccgccac taataccatt ataaacatga ccttttaaca attgagaatc
     1981 aataatataa agaccagttc ttgttaatac taaatgacta attcgttcaa tattattaaa
     2041 gccatccttt ggtaaaaaga tatttgccat aatgtgcata tcttctggtc gaattcgttt
     2101 ttctttaact aatctttcac gaataccaat taatctcatg tccgttacat attcactatg
     2161 atttttcgag aacaatttta atgcgtcaat ctcacgatct tttgtactaa ccatgtgatt
     2221 ataatcttct tgttgttttg taattgtctt tttattttga atacgctctt tctctaaagc
     2281 ttcttcatga gactttttaa tgttttgttc ttgttgttca tacttttctt ctgtttgtcg
     2341 cttaactttt ttcttactac ctaaggcaac taaaaaaagg acaaaaaaga ttaatgcaat
     2401 gactactgca ataatgagtc caatgactat cggtgaagat aaatccatca caacaacgct
     2461 cctttttaat atatgaataa ctttaattat aatagaaaag ctaaagattt tcgatacata
     2521 ttatcattta tataccgaaa atcttttatt tagctatatt caattcatct tattatttta
     2581 ctgcgtcttt taattcttcc actttgtcta atttttccca tgggaataag acatctgtac
     2641 gtccaaaatg accataagca gcagtttgtt tgtaaatcgg ttgtttcaaa tcaagcattt
     2701 taataatacc tgcaggtctt aggtcaaagt gttttctaac tgcttcgaca agttgccctt
     2761 cagaaacttt acctgttcca aatgtatcaa ttgcaattga cactggttct gcaacaccaa
     2821 tcgcatatgc caattgtact tcacattgat ctgctaaacc tgctgcaaca atatttttag
     2881 ccacataacg tgcagcgtat gcagctgaac ggtctacttt tgtaggatcc ttaccactga
     2941 agcatccgcc accatgacgt gcatagccac cgtacgtatc aacaatgatt ttacgtcctg
     3001 ttaatcctgc atcaccttga ggtccaccga ttacaaagcg tcctgtagga ttgatgtaga
     3061 atttagtttg ttcattaatc aagttttctg gaacagttgg ataaatgaca tgtgctttaa
     3121 tgtcttcttg aatttgttca agtgtcacat cctcagcatg ttgtgttgat acgacaatcg
     3181 tatcaatacg tactgggtta tcattttcat catattcaac agtgacctga actttaccgt
     3241 ctggtcgtaa ataatttaac gtaccatctt tacgcacatc tgataaacgt tttgccaatt
     3301 gatgtgataa ataaattgct agaggcatat acgtctctgt ttcattcgtt gcgtaaccaa
     3361 acattaaacc ttggtcacct gcacctgttg cttcaatttc ttcttcgcta tctttatcac
     3421 gatactctaa tgctttatcc acgccttgtg caatgtcagg tgattgttca tcaatcgcag
     3481 ttaaaattgc cattgtttca taatcataac catattttgc tcttgtgtat ccaatttctt
     3541 taattgtttc tctaacaact ttcggaatat caacatatgt tgttgtagaa atttcgccgg
     3601 cgatcaatgc catacctgtt gtaacagttg tttcacaagc tacacgtgca tttggatcgt
     3661 cttttaaaat agcatctaat attgcatctg acacttggtc agcgatttta tctgggtgtc
     3721 cttctgtaac agactctgaa gtaaataatc gtttgttatt taacatagtt tgctccttta
     3781 aatttatatt acgaaaattc tctctctgtg agctaaataa aaaagacctt ctaactatta
     3841 atatagagag aaggcctaat acgtccattc gctcttatcg ttcagaccta tttgtctgca
     3901 aacggtttgg cacctttctt ttataaaaaa gaggttgctg ggtttcattg ggtccatgtc
     3961 cctccaccac tcaggataag agaatccgtt aaaaataata gtacctaatt aatgaattaa
     4021 tgtcaatttt tcacaaataa atttacagta aaatattgta gattaattat gttaatgtgt
     4081 tatactaatt aaatgtaaag gcttacattt aaattatcgc tttggaggga tttaggatgt
     4141 cagtagacac atacactgaa acaactaaaa ttgacaaatt actgaaaaaa ccaacgtcac
     4201 attttcaact ttcgacgaca caactttata ataaaatctt agacaataac gaaggggtat
     4261 taacagaact tggtgctgtt aatgcaagta ctggaaaata tactggtcgt tcgcctaaag
     4321 acaaattttt tgtctctgaa ccttcatata gagataacat tgattgggga gaaattaatc
     4381 aacctatcga tgaagaaact ttcttgaagt tataccataa agtactagac tatttagata
     4441 aaaaagatga actatacgta tttaaaggct acgctggtag cgataaagat acaatgttaa
     4501 aacttacagt catcaatgaa ttagcatggc ataatttatt tgctaaaaat atgtttatta
     4561 gacctgaatc aaaagaagaa gctacaaaga ttaaacctaa cttcactatc gtttctgcac
     4621 cacattttaa agcagatcca gaagttgatg gtactaaatc tgaaaccttt gtcattattt
     4681 catttaaaca caaagtcatt ttaatcggcg gtactgaata cgctggtgaa atgaaaaaag
     4741 gtatcttctc tgtaatgaat tatctcttac cgatgcaaga tattatgagc atgcattgct
     4801 cagcaaacgt tggtgaaaaa ggcgatgttg cattattctt tggtctatct ggcactggta
     4861 aaacaacctt atcggctgac ccacaccgta aactaatcgg tgatgatgaa cacggctgga
     4921 ataaaaacgg ggtctttaat atcgaaggtg gctgctatgc aaaagcaatt aatctttcca
     4981 aagaaaaaga accacagatt tttgacgcaa tcaaatatgg tgcaatttta gagaacactg
     5041 tagttgcaga agatggttca gtggactttg aagacaatcg ttatacagaa aacacgcgtg
     5101 ccgcttatcc aattaatcac attgacaata ttgtagtacc atctaaagca gcacatccaa
     5161 atacaattat tttcttaact gcggatgcat ttggtgttat tccaccgatt tcaaagttaa
     5221 ataaagacca agcaatgtat catttcttga gtggtttcac ttctaaatta gctggtacag
     5281 agcgtggtgt gacagaacct gaaccatcat tctcaacatg tttcggagca ccgttcttcc
     5341 cgttacaccc tactgtttac gctgatctat taggtgaact tatcgattta catgatgttg
     5401 atgtttatct tgttaatact ggatggactg gcggaaaata tggtgtagga cgtagaatca
     5461 gcttacatta cacacgtcaa atggtaaacc aagcgatttc tggcaaattg aaaaatgcag
     5521 aatatacaaa agatagtacg tttggtttaa gcattcctgt agaaattgaa gatgtaccga
     5581 aaacaatttt aaatccaatt aatgcttgga gcgacaaaga gaaatataaa gcacaagcag
     5641 aagatttaat tcaacgtttt gaaaagaact tcgaaaaatt tggtgaaaaa gttgaacata
     5701 ttgctgaaaa aggtagcttc aacaaataaa tttgaatact
//
LOCUS       DALPQQ010000135         5735 bp    DNA     linear   BCT 22-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus strain K18-6-464
            SAMD00233528-rid16434743.denovo.136, whole genome shotgun sequence.
ACCESSION   DALPQQ010000135 DALPQQ010000000
VERSION     DALPQQ010000135.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMD00233528
            Sequence Read Archive: DRR236061
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 5735)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5735)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001543423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001543423.1
            Genome Coverage       :: 77x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/22/2022 17:09:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,811
            CDSs (total)                      :: 2,743
            Genes (coding)                    :: 2,689
            CDSs (with protein)               :: 2,689
            Genes (RNA)                       :: 68
            rRNAs                             :: 2, 4, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 4, 2 (16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 54
            CDSs (without protein)            :: 54
            Pseudo Genes (ambiguous residues) :: 0 of 54
            Pseudo Genes (frameshifted)       :: 27 of 54
            Pseudo Genes (incomplete)         :: 27 of 54
            Pseudo Genes (internal stop)      :: 10 of 54
            Pseudo Genes (multiple problems)  :: 10 of 54
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5735
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMD00233528-rid16434743.denovo.136"
                     /strain="K18-6-464"
                     /db_xref="taxon:1280"
                     /geo_loc_name="Japan: Niigata"
     gene            32..916
                     /gene="ylqF"
                     /locus_tag="O7798_002274"
     CDS             32..916
                     /gene="ylqF"
                     /locus_tag="O7798_002274"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499751.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome biogenesis GTPase YlqF"
                     /protein_id="HDC2864484.1"
                     /translation="MVIQWYPGHMAKAKREVSEQLKKVDVVFELVDARIPYSSRNPMI
                     DEVINQKPRVVILNKKDMSNLNEMSKWEQFFIDKGYYPVSVDAKHGKNLKKVEAAAIK
                     ATAEKFEREKAKGLKPRAIRAMIVGIPNVGKSTLINKLAKRSIAQTGNKPGVTKQQQW
                     IKVGNALQLLDTPGILWPKFEDEEVGKKLSLTGAIKDSIVHLDEVAIYGLNFLIQNDL
                     ARLKSHYNIEVPEDAEIIAWFDAIGKKRGLIRRGNEIDYEAVIELIIYDIRNAKIGNY
                     CFDIFKDMTEELANDANN"
     gene            900..1667
                     /locus_tag="O7798_002275"
     CDS             900..1667
                     /locus_tag="O7798_002275"
                     /EC_number="3.1.26.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499752.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease HII"
                     /protein_id="HDC2864485.1"
                     /translation="MTLTIKEVTQLINAVNTIEELENHECFLDERKGVQNAIARRRKA
                     LEKEQALKEKYVEMTYFENEILKEHPNAIICGIDEVGRGPLAGPVVACATILNSNHNY
                     LGLDDSKKVPVTKRLELNEALKNEVTAFAYGIATAEEIDEFNIYKATQIAMQRAIDGL
                     SVQPTHLLIDAMTLDNALPQVSLIKGDARSVSIAAASIMAKVFRDDYMTQLSKDYPEY
                     GFEKNAGYGTKQHLLAIDDIGIMKEHRKSFEPIKSLL"
     gene            1776..2942
                     /gene="sucC"
                     /locus_tag="O7798_002276"
     CDS             1776..2942
                     /gene="sucC"
                     /locus_tag="O7798_002276"
                     /EC_number="6.2.1.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006190114.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ADP-forming succinate--CoA ligase subunit beta"
                     /protein_id="HDC2864486.1"
                     /translation="MNIHEYQGKEIFRSMGVAVPEGRVAFTAEEAVEKAKELNSDVYV
                     VKAQIHAGGRGKAGGVKIAKSLSEVETYAKELLGKTLVTHQTGPEGKEIKRLYIEEGC
                     AIQKEYYVGFVIDRATDQVTLMASEEGGTEIEEVAAKTPEKIFKETIDPVIGLSPFQA
                     RRIAFNINIPKESVNKAAKFLLALYNVFIEKDCSIVEINPLVTTADGDVLALDAKINF
                     DDNALFRHKDVVELRDLEEEDPKEIEASKHDLSYIALDGDIGCMVNGAGLAMATMDTI
                     NHFGGNPANFLDAGGSATREKVTEAFKIILGDENVKGIFVNIFGGIMKCDVIAEGIVE
                     AVKEVDLTLPLVVRLEGTNVELGKKILKDSGLAIEPAATMAEGAQKIVKLVKEA"
     gene            2964..3872
                     /gene="sucD"
                     /locus_tag="O7798_002277"
     CDS             2964..3872
                     /gene="sucD"
                     /locus_tag="O7798_002277"
                     /EC_number="6.2.1.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499754.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="succinate--CoA ligase subunit alpha"
                     /protein_id="HDC2864487.1"
                     /translation="MSVFIDKNTKVMVQGITGSTALFHTKQMLDYGTKIVAGVTPGKG
                     GQVVEGVPVFNTVEEAKNETGATVSVIYVPAPFAADSILEAADADLDMVICITEHIPV
                     LDMVKVKRYLQGRKTRLVGPNCPGVITADECKIGIMPGYIHKKGHVGVVSRSGTLTYE
                     AVHQLTEEGIGQTTAVGIGGDPVNGTNFIDVLKAFNEDDETKAVVMIGEIGGTAEEEA
                     AEWIKANMTKPVVGFIGGQTAPPGKRMGHAGAIISGGKGTAEEKIKTLNSCGVKTAAT
                     PSEIGSTLIEAAKEAGIYESLLTVNK"
     gene            4099..5217
                     /locus_tag="O7798_002278"
     CDS             4099..5217
                     /locus_tag="O7798_002278"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499755.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysM peptidoglycan-binding domain-containing
                     protein"
                     /protein_id="HDC2864488.1"
                     /translation="MNKQQSKVRYSIRKVSIGILSISIGMFLALGMSNKAYADEIDKS
                     KDFTRGYEQNVFAKSELNANKNTTKDKIKNEGAVKTSDTSLKLDNKSAISNGNEINQD
                     IKISNTPKNSSQGNNLVINNNELTKEIKIANLEAQNSNQKKTNKVTNNYFGYYSFREA
                     PKTQIYTVKKGDTLSAIALKYKTTVSNIQNTNNIANPNLIFIGQKLKVPMTPLVEPKP
                     KTVSSNNKSNSNSSTLNYLKTLENRGWDFDGSYGWQCFDLVNVYWNHLYGHGLKGYGA
                     KDIPYANNFNSEAKIYHNTPTFKAEPGDLVVFSGRFGGGYGHTAIVLNGDYDGKLMKF
                     QSLDQNWNNGGWRKAEVAHKVVHNYENDMIFIRPFKKA"
     gene            5245..>5735
                     /gene="fmhC"
                     /locus_tag="O7798_002279"
     CDS             5245..>5735
                     /gene="fmhC"
                     /locus_tag="O7798_002279"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499756.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FemA/FemB family glycyltransferase FmhC"
                     /protein_id="HDC2864489.1"
                     /translation="MKFSTLSEEEFTNYTKKHFKHYTQSIELYNYRNKINHEAHIVGV
                     KNDKNEVIAACLLTEARIFKFYKYFYSHRGPLLDYFDAKLVCYFFKELSKFIYKNRGV
                     FILVDPYLIENLRDANGRIIKNYNNSVIVKMLGKIGYLHQGYTTGYSNKSQIRWISVL
                     DLK"
BASE COUNT         2181 a          746 c         1150 g         1658 t
ORIGIN      
        1 gaaaagaatt gacgaaagta aggtgaattg aatggttatt caatggtatc caggacatat
       61 ggcgaaagcc aaaagagaag taagtgaaca attaaaaaaa gtagatgtag tgtttgaact
      121 agtagatgca agaattccat atagttcaag aaaccctatg atagatgaag ttattaacca
      181 aaaaccacgt gttgttatat taaataaaaa agatatgtct aatttaaatg agatgtcaaa
      241 atgggaacaa ttttttattg ataaaggata ctatcctgta tcagtggatg ctaagcacgg
      301 taaaaattta aagaaagtgg aagctgcagc aattaaggcg actgctgaaa aatttgaacg
      361 cgaaaaagcg aaaggactta aacctagagc gataagagca atgatcgttg gaattccaaa
      421 tgttggtaaa tccacattaa taaataaact ggcaaagcgt agtattgcgc agactggtaa
      481 taaaccaggt gtgaccaaac aacaacaatg gattaaagtt ggtaatgcat tacaactatt
      541 agacacacca gggatacttt ggcctaaatt tgaagatgaa gaagtcggta agaagttgag
      601 tttaactggt gcgataaaag atagtattgt gcacttagat gaagttgcca tctatggatt
      661 aaacttttta attcaaaatg atttagcgcg attaaagtca cattataata ttgaagttcc
      721 tgaagatgca gaaatcatag cgtggtttga tgcgataggg aaaaaacgtg gcttaattcg
      781 acgtggtaat gaaattgatt acgaagcagt cattgaactg attatttatg atattcgaaa
      841 tgctaaaata ggaaattatt gttttgatat ttttaaagat atgactgagg aattagcaaa
      901 tgacgctaac aattaaagaa gttacgcagt tgattaatgc ggttaataca atagaagaat
      961 tagaaaatca tgaatgcttt ttagatgagc gaaaaggtgt tcaaaatgcc atagctaggc
     1021 gcagaaaagc gttagaaaaa gaacaagctt taaaagaaaa gtatgttgaa atgacttact
     1081 ttgaaaatga aatattaaaa gagcatccta atgctattat ttgtgggatt gatgaagttg
     1141 gaagaggacc tttagcaggt ccagtcgttg catgcgcaac aattttaaat tcaaatcaca
     1201 attatttggg ccttgatgac tcgaaaaaag tacctgttac gaaacgtcta gaattaaatg
     1261 aagcactaaa aaatgaagtt actgcttttg catatgggat cgcgacagct gaagaaatag
     1321 atgaatttaa tatttataaa gctactcaaa tcgccatgca gcgagctatt gatggattat
     1381 cagtacaacc aacgcattta ttgatagacg cgatgacgct tgataatgca ctgcctcaag
     1441 tatctttaat caagggtgat gcaagaagtg tgtccattgc agctgcaagt atcatggcaa
     1501 aggtttttcg tgatgattat atgacacagt tatctaaaga ttatcctgaa tatggttttg
     1561 aaaaaaacgc gggttacggt accaaacaac atttactagc aatcgatgat attggcatta
     1621 tgaaagagca tagaaaaagc tttgaaccta taaaatcgtt actgtaaatc gtaaaattca
     1681 attaaatgat aaaaaagtag catttaagtt tacaatagcg cttacatttt ttataattgt
     1741 aagggaactt aacctaagta acaggaggat ggaagatgaa tatccacgag tatcaaggta
     1801 aagaaatatt tcgttcaatg ggcgttgcag ttccagaagg acgagtagca tttactgctg
     1861 aagaagcggt ggagaaagca aaagaattaa attctgatgt ttatgttgta aaagcacaaa
     1921 ttcatgctgg aggtagaggt aaagcaggcg gagtaaaaat tgctaaatct ttatctgagg
     1981 tagaaacata tgcaaaagaa ttattaggga aaactttggt gacacatcaa actggtccag
     2041 aaggtaaaga aattaagcgt ttatatatcg aagaaggttg tgctattcaa aaagaatatt
     2101 acgttggatt cgttattgat cgtgcgactg accaagtaac attgatggcg tctgaagaag
     2161 ggggcactga gattgaagaa gttgctgcga agactcctga aaagatcttc aaagaaacta
     2221 tcgatccagt aatcggactt tcaccattcc aagcaagacg aattgcgttt aatattaata
     2281 ttcctaaaga atctgttaac aaagctgcta aattcttatt agcactttat aatgtattca
     2341 ttgaaaaaga ttgttcaatc gtagaaatca acccattagt tacaacagct gatggtgatg
     2401 tattggcatt agatgctaaa attaattttg atgataatgc attattcaga cataaagatg
     2461 ttgtagaatt acgtgattta gaagaagaag atccgaaaga gattgaagcg tctaaacatg
     2521 atttatcata cattgcatta gatggtgaca tcggatgtat ggttaatggt gcaggtttag
     2581 ccatggcaac aatggatacg attaatcatt tcggtggaaa cccagccaat ttcttagatg
     2641 caggcggaag cgctactaga gaaaaagtaa ctgaagcatt taaaatcatt ttaggtgatg
     2701 aaaatgttaa aggtattttt gtaaacattt tcggtggcat tatgaaatgt gatgttatcg
     2761 cagaaggtat cgttgaagct gtaaaagaag tagatttaac tttaccacta gttgtacgcc
     2821 tagaaggtac aaatgttgag ttaggtaaaa aaatcttaaa agactcagga ttagcaattg
     2881 aaccagcagc aacaatggct gaaggtgcac aaaaaattgt taaactagtc aaagaagcat
     2941 aaggaaagga tgggagcact aagatgagtg tatttataga taagaatact aaagtaatgg
     3001 tacaaggtat tacagggtct actgcccttt tccatacaaa acaaatgctt gattatggta
     3061 cgaaaatagt agcaggtgtg acgcctggta aaggtggtca agttgttgaa ggcgttcctg
     3121 ttttcaacac tgttgaagaa gctaaaaatg aaactggggc aacggtttca gtcatttacg
     3181 ttccagcacc atttgctgca gactcaattt tagaagcagc tgatgcagac ttagatatgg
     3241 ttatttgtat cactgaacat attcctgtat tagacatggt taaagttaaa cgctacttac
     3301 aaggtagaaa aacacgttta gttggtccga actgtccagg tgtgattaca gcagatgaat
     3361 gtaaaattgg tattatgcct ggctatattc acaaaaaagg tcatgttggt gtagtatctc
     3421 gttcaggtac attaacatat gaagcagtgc accaattgac tgaagaaggt attggtcaaa
     3481 ctacagctgt tggtattggt ggagacccag tcaacggaac aaactttatt gatgttttaa
     3541 aagcattcaa tgaagatgac gaaacgaaag cagttgttat gattggtgaa atcggtggta
     3601 cggctgaaga agaagcagct gaatggatta aagcgaatat gacaaaacca gttgtaggct
     3661 ttatcggtgg acaaacagca cctcctggaa aacgtatggg acatgctggt gcaatcattt
     3721 caggtggtaa aggtactgct gaagagaaaa ttaaaacatt aaatagttgt ggtgtgaaaa
     3781 cagcggcaac accttcagaa attggttcaa cattaattga agctgctaaa gaagcaggta
     3841 tttatgaatc attattaact gttaataaat aaagttaaaa gatgatataa atggctatag
     3901 cccattccat actttataaa agtatcggaa atgggctatt tgtcgtgcga tgaattttag
     3961 tacacttttc atattttgga aagacaagtt aattatttta cctcctacaa tagctttata
     4021 aaacaaagaa aattttaatt aaaatatata gcgcactatg ttataatgtt tgtatattat
     4081 tgtaaggagt gtttcatcat gaataaacaa caaagtaaag tacgctattc aattagaaaa
     4141 gttagtattg gaattttgtc aatttcaata ggtatgtttt tggcattggg tatgtcgaac
     4201 aaagcatatg cagatgaaat tgataaatct aaagatttta caagagggta tgagcaaaat
     4261 gtattcgcga aatcagagtt aaatgctaat aaaaatacga caaaagacaa aataaaaaat
     4321 gaaggtgctg ttaaaacatc ggacacaagt ttaaagttag acaacaaatc agcaatttca
     4381 aacggaaatg aaattaatca agatataaag atttcaaata ctccgaaaaa ctcaagccaa
     4441 ggtaacaatc tagttattaa taacaatgaa cttactaaag aaattaaaat tgcaaacttg
     4501 gaagctcaaa attctaatca gaagaaaacg aataaagtta ctaataatta ctttggttac
     4561 tacagtttta gagaagctcc aaaaacacaa atctatactg taaaaaaagg agacacactt
     4621 agtgctatag cattaaaata caaaactaca gtttcaaata ttcaaaatac aaataatata
     4681 gcaaatccta atttaatatt tattggtcaa aaattaaaag tgccaatgac accattagta
     4741 gaaccaaaac caaaaacagt gtcttcaaat aataaaagta atagtaatag cagtacatta
     4801 aattatttga aaacattaga gaatagagga tgggatttcg acggtagtta tggatggcaa
     4861 tgtttcgatt tagttaatgt atattggaat catctttatg gtcatggatt aaaaggatat
     4921 ggagctaaag atataccata tgcaaataat tttaatagtg aagctaaaat ttatcacaac
     4981 acaccaactt tcaaagctga acctggggac ttagtggttt ttagtggaag atttggtgga
     5041 ggatatggtc atacagctat tgtcttaaat ggtgattatg atggaaaatt aatgaagttc
     5101 caaagtttag atcaaaactg gaataatggt ggatggcgta aagcagaggt tgcacataaa
     5161 gttgttcata attatgaaaa tgatatgatt tttattagac catttaaaaa agcataattt
     5221 aaatcgaagg caggacattg aaatatgaaa ttttcaactt taagtgaaga agaatttacc
     5281 aactacacca aaaagcactt caaacattat acacagtcta tagaattata taattataga
     5341 aataaaataa atcatgaagc acatattgtg ggagtgaaga atgataaaaa tgaagttata
     5401 gctgcatgtt tattaacaga ggcacgaatt tttaaattct acaaatattt ctactctcat
     5461 agaggtcctt tacttgatta tttcgatgct aaattagttt gttacttttt taaagaatta
     5521 tctaaattca tttataaaaa tagaggagta tttattcttg ttgatccata tttaatagag
     5581 aatttaagag atgcaaatgg taggataata aagaattata ataattcagt gatagtaaag
     5641 atgctaggga aaattgggta tctccatcaa ggttatacaa caggatattc aaataaaagt
     5701 caaattaggt ggatttctgt attggattta aaaga
//
LOCUS       DALPQQ010000136         5666 bp    DNA     linear   BCT 22-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus strain K18-6-464
            SAMD00233528-rid16434743.denovo.137, whole genome shotgun sequence.
ACCESSION   DALPQQ010000136 DALPQQ010000000
VERSION     DALPQQ010000136.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMD00233528
            Sequence Read Archive: DRR236061
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 5666)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5666)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001543423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001543423.1
            Genome Coverage       :: 77x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/22/2022 17:09:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,811
            CDSs (total)                      :: 2,743
            Genes (coding)                    :: 2,689
            CDSs (with protein)               :: 2,689
            Genes (RNA)                       :: 68
            rRNAs                             :: 2, 4, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 4, 2 (16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 54
            CDSs (without protein)            :: 54
            Pseudo Genes (ambiguous residues) :: 0 of 54
            Pseudo Genes (frameshifted)       :: 27 of 54
            Pseudo Genes (incomplete)         :: 27 of 54
            Pseudo Genes (internal stop)      :: 10 of 54
            Pseudo Genes (multiple problems)  :: 10 of 54
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5666
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMD00233528-rid16434743.denovo.137"
                     /strain="K18-6-464"
                     /db_xref="taxon:1280"
                     /geo_loc_name="Japan: Niigata"
     gene            complement(128..403)
                     /locus_tag="O7798_002280"
     CDS             complement(128..403)
                     /locus_tag="O7798_002280"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500587.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YtxH domain-containing protein"
                     /protein_id="HDC2864490.1"
                     /translation="MENKFVPGILIGAVIGGAISLADKSTRQALVQSVKDAKNGNRTR
                     KPSKVSKIKDEVLYWKDVVEEIRRNNPELERSLKDAKETFVNRKNQR"
     gene            complement(410..874)
                     /locus_tag="O7798_002281"
     CDS             complement(410..874)
                     /locus_tag="O7798_002281"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500586.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="low molecular weight phosphotyrosine protein
                     phosphatase"
                     /protein_id="HDC2864491.1"
                     /translation="MVDVAFVCLGNICRSPMAEAIMRQRLKDRNIHDIKVHSRGTGSW
                     NLGEPPHEGTQKILNKHNIPFDGMISELFEATDDFDYIVAMDQSNVDNIKSINPNLKG
                     QLFKLLEFSNMEESDVPDPYYTNNFEGVYDMVLSSCDNLIDYIVKDANLKEG"
     gene            1021..1221
                     /locus_tag="O7798_002282"
     CDS             1021..1221
                     /locus_tag="O7798_002282"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500585.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1128 family protein"
                     /protein_id="HDC2864492.1"
                     /translation="MTNEEKVLAIREKLNIVNQGLLDPEKYKNANEEELTDIYDFVQS
                     RERLSPSEVTAIADALGQLRHE"
     gene            1224..2480
                     /locus_tag="O7798_002283"
     CDS             1224..2480
                     /locus_tag="O7798_002283"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500584.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminopeptidase"
                     /protein_id="HDC2864493.1"
                     /translation="MGILTNYKEKLQQYAELLVKVGMNVQPKQPVFIRSSVETLELTH
                     LIVEEAYHCGASDVRVVYSDPTLKRLKFENESVEHFANHEIKSYDVEARMDYVKRGAA
                     NLALISEDPDLMDGIDNQKLQAFQQQNARAFKGYMESVQKNQFPWVVAAFPSKAWAKR
                     VYPELSVEEAYIKFIDEVFDIVRIDGNDPVENWRQHIANLSVYAQKLQQKNYHALHYV
                     SEGTDLTVGLAKNHIWEDATSYVNGKEQAFIANIPTEEVFTAPDRNRVDGYVTNKLPL
                     SYNGTIIDQFKLMFKDGEIIDFSAGKGEAVLKDLINTDEGSRRLGEVALVPDDSPISN
                     RNTIFYNTLFDENAACHLAIGSAYAFNIQGGTEMTVEEKIASGLNDSNVHVDFMIGSS
                     DLTIYGIFEDGSKELVFENGNWASTF"
     gene            2570..3100
                     /locus_tag="O7798_002284"
     CDS             2570..3100
                     /locus_tag="O7798_002284"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500583.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA thioesterase"
                     /protein_id="HDC2864494.1"
                     /translation="MTNQDRPMKSMSESKCYKNRQVFPQDTNHHHTMFGGTLMANIDE
                     IAAITAMKHAGAQVVTASTDSVDFLKPIKTGDILQYVAMVSYAGTSSMEVVVQIRIDD
                     VFNNKHDLAALSYLTFVALDDEGKPKHVPGVYPEDDVEKWFYDTAPQRVERRKARRIE
                     SKQTIEYLAQVQHIRD"
     gene            complement(3360..4511)
                     /gene="yfkAB"
                     /locus_tag="O7798_002285"
     CDS             complement(3360..4511)
                     /gene="yfkAB"
                     /locus_tag="O7798_002285"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001089599.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="radical SAM/CxCxxxxC motif protein YfkAB"
                     /protein_id="HDC2864495.1"
                     /translation="MNSVKLKQPVSIYNDPWEAYNDVKEHGQLTLSNIEFTTTNLCNM
                     RCSHCAVGYTLQTVDPEPLDMDLIYRRLDEIPNLRTMSITGGEPMFSKKSIRNVVKPL
                     LKYAHHRGIYTQMNSNLTLPQDRYLDIAEYIDVMHISHNWGTTDEFANVGFGAMKKQP
                     PLKAKLKLYEQMISNARTLSEQGMFVSAETMLNQSTLPHLRKIHQEVVHDMKCSRHEI
                     HPMYPADFASQLNVLTLAEMKKTIHDILDFRDEDIWMLFGTLPVFPCLKDDEDQKLLS
                     RLRNAKNVTTRNDPDGRSRLNVNVFTGNVIVTDFGDETGTISNIQKDKLTDVFDKWLS
                     SDLAKSLNCHCSEFSCLGPNVLVKNMYYPNMDFKDNERHMHKQPQIIQF"
     gene            4735..4896
                     /locus_tag="O7798_002286"
     CDS             4735..4896
                     /locus_tag="O7798_002286"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500511.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDC2864496.1"
                     /translation="MNEQQTIEQIKARLNKFIEDIDHVNPDEVRVEDIDEWIGLLDQL
                     EEKVKLVSK"
     gene            5027..5542
                     /locus_tag="O7798_002287"
     CDS             5027..5542
                     /locus_tag="O7798_002287"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500510.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type 1 glutamine amidotransferase"
                     /protein_id="HDC2864497.1"
                     /translation="MTKKVAIILANEFEDIEYSSPKEALENAGFNTVVIGDTANSEVV
                     GKHGEKVTVDVGIAEAKPEDYDALLIPGGFSPDHLRGDTEGRYGTFAKYFTKNDVPTF
                     AICHGPQILIDTDDLKGRTLTAVLNVRKDLSNAGAHVVDESVVVDNNIVTSRVPDDLD
                     DFNREIVKQLQ"
BASE COUNT         1958 a          847 c          995 g         1866 t
ORIGIN      
        1 aaaattaaaa caaaggcaat actgaaacaa tgcagtttgg ccaatcattg tattatcatt
       61 taataatgat aactatgaaa ggcgtacacc aaattgttaa gtattgcctt ataaaaacaa
      121 aatcatctta gcgttgattt tttctattaa caaatgtttc tttcgcatcc tttaatgaac
      181 gttctaattc aggattatta cgacgaattt cttcaacaac atctttccag tataaaactt
      241 cgtctttaat cttgctgact ttagaaggct tacgagtgcg gttaccattt tttgcatctt
      301 taactgattg aactaaagct tgacgtgtag atttatcagc taaactaatt gcaccaccaa
      361 ttacggcacc aattaaaata ccaggaacaa atttattttc cataaaaaac tacccctctt
      421 tcaaatttgc atcttttacg atgtagtcta ttaaattatc acaagatgat aataccatgt
      481 cgtatacacc ttcaaaatta ttcgtgtagt atggatctgg tacatcactc tcttccatat
      541 tactaaattc taacagtttg aacaattgtc ccttaagatt aggattgata gatttaatat
      601 tatcaacgtt actttgatcc atagccacaa tgtaatcaaa atcatctgtc gcttcgaata
      661 attcactaat catgccatca aatggaatat tgtgtttgtt gagaattttt tgtgtacctt
      721 catgaggtgg ctctcctaaa ttccagctac cagtacctct tgaatgtact ttaatatcat
      781 gaatatttct gtctttaagt ctttgtcgca tgattgcttc tgccattgga gaacgacata
      841 tattgccaag acagacaaat gctacatcta ccattttgat tcctccaaac tatgtagtta
      901 tatccccatt ttatagcgac tttaaacaat aagaaagcag attatataaa attctattaa
      961 agtttattaa attgtgatac tttgataaca taactattat tagaggtgaa cattgtggct
     1021 atgacaaatg aagagaaagt attagctatt agagagaagt taaatattgt taatcaagga
     1081 ttattagatc ctgaaaaata taaaaatgca aatgaagaag aattaacaga tatatatgat
     1141 tttgttcaat caagagaaag attgtcgcca agtgaagtga cagctattgc tgacgcttta
     1201 ggacaattgc gacacgaata ggagtgggaa ttttgactaa ttacaaagaa aagttacaac
     1261 aatacgctga actattagtt aaggttggta tgaatgttca accaaaacag ccagtattta
     1321 ttagatcatc agtagaaaca ttagaattaa cgcatttaat tgtagaagaa gcatatcatt
     1381 gtggcgcttc agatgtacgt gttgtatata gcgatccaac cttaaaacgc ttaaaatttg
     1441 aaaatgaatc tgtggaacat tttgctaatc atgagataaa atcatatgat gttgaagcga
     1501 gaatggatta cgttaaacgt ggcgctgcta atttagcact tattagtgaa gatcctgatt
     1561 taatggatgg tatcgataac caaaaattac aagcatttca acaacaaaac gcacgcgcat
     1621 ttaaaggata tatggaaagt gtacaaaaaa atcaatttcc atgggtcgta gctgcttttc
     1681 catctaaagc ttgggcgaag agagtgtatc ctgaactatc tgtagaagaa gcatatatta
     1741 agtttattga cgaggtattc gatattgtgc gaattgatgg taacgatcca gttgaaaatt
     1801 ggcgtcaaca catcgctaat ttaagtgttt acgctcaaaa gttacaacaa aaaaattacc
     1861 atgcgttgca ttatgtatct gaaggtactg atttaacagt aggtttagcg aaaaatcata
     1921 tctgggaaga tgctacaagt tatgttaacg gcaaggaaca agcttttatt gctaatatac
     1981 caactgaaga agtatttaca gcaccagatc gaaatagagt agatggatat gttactaata
     2041 aattgccttt aagttataat ggcacaatta tcgatcaatt taaattgatg tttaaagatg
     2101 gagagattat tgatttttca gctggaaaag gtgaagcggt attgaaagat ttaatcaata
     2161 ctgatgaagg ttcaagaaga ttaggtgaag tagcattagt acctgatgat tcaccgatat
     2221 caaatcgtaa taccattttt tacaatactt tatttgatga aaatgcagca tgtcatttag
     2281 cgattggatc tgcttacgcc tttaatattc aaggtggaac ggaaatgact gttgaggaaa
     2341 agattgcaag cggattaaat gattcaaatg tacatgtcga tttcatgatt ggtagtagtg
     2401 atttgactat ttatggcata ttcgaagatg gttcaaaaga actagtattt gaaaatggaa
     2461 attgggcatc aacattttaa taaatgttat tttgaggtgc tgagtaggaa atgaaacatg
     2521 tatttaaagg tcaaatacgt gattaaagta tagattggga gataaaataa tgacaaatca
     2581 ggacagacca atgaaatcta tgtcagaatc aaaatgttat aaaaatagac aagttttccc
     2641 tcaagatacg aatcaccatc atacaatgtt tggtggtaca ttgatggcta atattgatga
     2701 aattgcagca atcacagcta tgaaacatgc tggtgcgcaa gtagttaccg catctacaga
     2761 ctcagtagat ttcttaaagc cgattaaaac aggggacata ttacaatacg tagcgatggt
     2821 ttcatacgct gggactagtt caatggaagt ggtcgttcaa attagaattg acgatgtatt
     2881 taataacaag catgatttag ctgcattaag ttacttaaca tttgttgcgt tagatgatga
     2941 aggcaaacct aaacatgtac ctggtgtata tccagaagat gatgttgaaa aatggtttta
     3001 tgatacagca ccacaacgtg ttgaacgaag aaaagcacgt cgcattgaaa gtaaacaaac
     3061 aattgaatat ttagctcaag tgcaacatat tagagactaa aaatataaag acagattgtt
     3121 aaggatgaat tgaactgtta tgttcgaata ttccacctac aatctgtctt tttgattatg
     3181 cacgtttatg cttttagtta aaatttaccc cttttattat agactattag tcctattaaa
     3241 tgccctttat tatttaagta gagtactgcc agcaattaat tgttttttat tttataatag
     3301 cattaaaata tgcggagact acttatcgat aaagtgcttc tccgcataat taagagtttt
     3361 taaaattgta taatttgtgg ttgtttgtgc atatgacgct cattatcttt aaaatccata
     3421 ttcggatagt acatattttt aacaagaaca tttggtccta aacaactaaa ctcggaacaa
     3481 tgacaattta atgatttagc aagatcagag gataaccatt tatcaaatac atctgttaat
     3541 ttatcttttt gtatattcga aattgtacct gtttcatctc cgaaatcagt tacgattaca
     3601 ttacctgtaa atacattgac atttaaacga ctacggccat ccgggtcatt tctagtcgtt
     3661 acatttttag catttcttaa acgtgatagt aacttttgat cttcatcatc ctttaagcat
     3721 ggaaacacag gcaaagtacc aaataacatc caaatatctt catctctgaa atccaatata
     3781 tcatgaattg tctttttcat ttccgctaga gttaacacat ttaattgact tgcaaagtca
     3841 gctggataca tagggtgaat ctcgtgtctg ctacatttca tatcatgaac gacttcttga
     3901 tgtatttttc gtaaatgtgg tagcgtactt tgattgagca ttgtttccgc agatacaaac
     3961 attccttgtt ctgataatgt acgtgcattc gaaatcattt gttcatataa ttttaactta
     4021 gcttttaacg gtggttgctt cttcattgcg ccaaagccaa catttgcgaa ttcatcagtt
     4081 gttccccagt tgtgtgagat atgcataaca tcgatatatt cagcaatatc taaataacga
     4141 tcttgaggca atgttaggtt tgaattcatt tgtgtatata tacctcgatg atgtgcatac
     4201 tttaatagag gtttaacaac atttctaata gactttttag aaaacattgg ttcgccacct
     4261 gtaatagaca tcgttcgcag atttggaatt tcatcaagtc tacgataaat taagtccata
     4321 tctaaaggct cggggtcgac agtttgtaaa gtataaccaa ctgcacagtg gctacaacgc
     4381 atattacaaa gatttgtagt tgtaaattcg atgttactta aagttaattg gccatgttct
     4441 ttaacatcgt tatatgcttc ccatggatca ttgtaaatgc taacaggttg cttcaatttg
     4501 acgctattca tcgtcttaaa cttccttctt tctatttggt tcatatcggt atgataccac
     4561 ttcgtattat cactcgtaac aaattatctc ttaattttag ttaattgaaa aggggatttt
     4621 taaaagtcaa aataatttga atgtcataaa tatagctaag attatatcgc tttaacgcaa
     4681 tttctgttag gataataatg aaaaagaaaa caaaataaaa ggagttaact ttttatgaat
     4741 gaacagcaaa caatcgaaca gataaaagcg cgtttaaata agtttattga ggatatcgat
     4801 catgtaaatc ctgatgaagt acgtgttgaa gatatagatg aatggattgg attgttagat
     4861 cagcttgaag aaaaggttaa attagtatct aagtaaatgc cacataagat gtgttagggt
     4921 tagatatcgc gacagtcgct taatattttt tatatcttgt atgtttaatc actgatttac
     4981 ttgtctatag taattatatc aatgatatat agaaaggtga ttttcaatga ctaaaaaagt
     5041 agcaattatt ctagcaaacg aatttgaaga tatagaatat tcaagcccta aagaggcatt
     5101 agagaatgca ggctttaata ctgtagtgat tggagatact gcaaatagtg aagttgttgg
     5161 taaacacggt gaaaaagtta ctgtcgatgt aggcattgca gaagctaaac cagaagatta
     5221 tgatgcatta ttaattcctg gaggattttc accagatcat ttacgtggag atacagaagg
     5281 tcgatatggc acatttgcta aatactttac taaaaatgat gtaccaacat ttgccatttg
     5341 tcatgggcca caaatactaa tagatacaga cgatttaaaa ggtcgtacgt taacagcagt
     5401 attaaatgta cgcaaagatt tatcaaatgc aggcgcacat gtagttgatg agtcagtagt
     5461 tgtagacaac aatattgtaa caagtcgagt accagacgat ttagatgatt ttaatcgaga
     5521 aatcgttaaa caattacaat agaagtattg tggttatcga ttgttaaaat ttatatattt
     5581 tcgtttgaaa tgaaatatgg attttagttt taataaatga ataacaaata aaaggtcgtc
     5641 tctattggca tttaataggg atggtc
//
LOCUS       DALPQQ010000137         5535 bp    DNA     linear   BCT 22-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus strain K18-6-464
            SAMD00233528-rid16434743.denovo.138, whole genome shotgun sequence.
ACCESSION   DALPQQ010000137 DALPQQ010000000
VERSION     DALPQQ010000137.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMD00233528
            Sequence Read Archive: DRR236061
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 5535)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5535)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001543423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001543423.1
            Genome Coverage       :: 77x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/22/2022 17:09:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,811
            CDSs (total)                      :: 2,743
            Genes (coding)                    :: 2,689
            CDSs (with protein)               :: 2,689
            Genes (RNA)                       :: 68
            rRNAs                             :: 2, 4, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 4, 2 (16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 54
            CDSs (without protein)            :: 54
            Pseudo Genes (ambiguous residues) :: 0 of 54
            Pseudo Genes (frameshifted)       :: 27 of 54
            Pseudo Genes (incomplete)         :: 27 of 54
            Pseudo Genes (internal stop)      :: 10 of 54
            Pseudo Genes (multiple problems)  :: 10 of 54
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5535
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMD00233528-rid16434743.denovo.138"
                     /strain="K18-6-464"
                     /db_xref="taxon:1280"
                     /geo_loc_name="Japan: Niigata"
     gene            126..929
                     /gene="folP"
                     /locus_tag="O7798_002288"
     CDS             126..929
                     /gene="folP"
                     /locus_tag="O7798_002288"
                     /EC_number="2.5.1.15"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499066.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydropteroate synthase"
                     /protein_id="HDC2864498.1"
                     /translation="MTKTKIMGILNVTPDSFSDGGKFNNVESAINRVKAMIDEGADII
                     DVGGVSTRPGHEMVSLEEEMNRVLPVVEAIVGFDVKISVDTFRSEVAEACLKLGVDMI
                     NDQWAGLYDHRMFQIVAKYDAEIILMHNGNGNRDEPVVEEMLTSLLAQAHQAKIAGIP
                     SNKIWLDPGIGFAKTRNEEAEVMARLDELVATEYPVLLATSRKRFTKEMMGYDTTPVE
                     RDEVTAATTAYGIMKGVRAVRVHNVELNAKLAKGIDFLKENENARHNLS"
     gene            907..1272
                     /gene="folB"
                     /locus_tag="O7798_002289"
     CDS             907..1272
                     /gene="folB"
                     /locus_tag="O7798_002289"
                     /EC_number="4.1.2.25"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499067.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydroneopterin aldolase"
                     /protein_id="HDC2864499.1"
                     /translation="MQDTIFLKGMRFYGYHGALSAENEIGQIFKVDVTLKVDLAEAGR
                     TDNVIDTVHYGEVFEEVKSIMEGKAVNLLEHLAERIANRINSQYNRVMETKVRITKEN
                     PPIPGHYDGVGIEIVRENK"
     gene            1269..1745
                     /gene="folK"
                     /locus_tag="O7798_002290"
     CDS             1269..1745
                     /gene="folK"
                     /locus_tag="O7798_002290"
                     /EC_number="2.7.6.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499068.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-amino-4-hydroxy-6-
                     hydroxymethyldihydropteridine diphosphokinase"
                     /protein_id="HDC2864500.1"
                     /translation="MIQAYLGLGSNIGDRESQLNDAIKILNEYDGINVSNISPIYETA
                     PVGYTEQPNFLNLCVEIQTTLTVLQLLECCLKTEECLHRIRKERWGPRTLDVDILLYG
                     EEMIDLPKLSVPHPRMNERAFVLIPLNDIAANVVEPRSKLKVKDLVFVDDSVKRYK"
     gene            2139..2231
                     /locus_tag="O7798_002291"
     CDS             2139..2231
                     /locus_tag="O7798_002291"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499069.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDC2864501.1"
                     /translation="MVNDKVLETSKEMYVEQKCLIFYKTLKENV"
     gene            2284..3771
                     /gene="lysS"
                     /locus_tag="O7798_002292"
     CDS             2284..3771
                     /gene="lysS"
                     /locus_tag="O7798_002292"
                     /EC_number="6.1.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499070.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lysine--tRNA ligase"
                     /protein_id="HDC2864502.1"
                     /translation="MSEEMNDQMLVRRQKLQELYDLGIDPFGSKFDRSGLSSDLKEEW
                     DQYSKEELVEKEADSHVAIAGRLMTKRGKGKAGFAHVQDLAGQIQIYVRKDQVGDDEF
                     DLWKNADLGDIVGVEGVMFKTNTGELSVKAKKFTLLTKSLRPLPDKFHGLQDIEQRYR
                     QRYLDLITNEDSTRTFINRSKIIQEMRNYLNNKGFLEVETPMMHQIAGGAAARPFVTH
                     HNALDATLYMRIAIELHLKRLIVGGLEKVYEIGRVFRNEGVSTRHNPEFTMIELYEAY
                     ADYHDIMDLTESMVRHIANEVLGSAKVQYNGETIDLESAWTRLHIVDAVKEATGVDFY
                     EVKSDEEAKALAKEHGIEIKDTMKYGHILNEFFEQKVEETLIQPTFIYGHPTEISPLA
                     KKNPEDPRFTDRFELFIVGREHANAFTELNDPIDQKGRFEAQLVEKAQGNDEAHEMDE
                     DYIEALEYGMPPTGGLGIGIDRLVMLLTDSPSIRDVLLFPYMRQK"
     gene            4329..4443
                     /gene="rrf"
                     /locus_tag="O7798_002293"
     rRNA            4329..4443
                     /gene="rrf"
                     /locus_tag="O7798_002293"
                     /product="5S ribosomal RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00001"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00001"
     gene            4456..4531
                     /locus_tag="O7798_002294"
     tRNA            4456..4531
                     /locus_tag="O7798_002294"
                     /product="tRNA-Val"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:4489..4491,aa:Val,seq:tac)
     gene            4548..4623
                     /locus_tag="O7798_002295"
     tRNA            4548..4623
                     /locus_tag="O7798_002295"
                     /product="tRNA-Thr"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:4581..4583,aa:Thr,seq:tgt)
     gene            4630..4702
                     /locus_tag="O7798_002296"
     tRNA            4630..4702
                     /locus_tag="O7798_002296"
                     /product="tRNA-Lys"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:4663..4665,aa:Lys,seq:ttt)
     gene            4736..4810
                     /locus_tag="O7798_002297"
     tRNA            4736..4810
                     /locus_tag="O7798_002297"
                     /product="tRNA-Gly"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:4768..4770,aa:Gly,seq:gcc)
     gene            4818..4906
                     /locus_tag="O7798_002298"
     tRNA            4818..4906
                     /locus_tag="O7798_002298"
                     /product="tRNA-Leu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:4852..4854,aa:Leu,seq:taa)
     gene            4912..4988
                     /locus_tag="O7798_002299"
     tRNA            4912..4988
                     /locus_tag="O7798_002299"
                     /product="tRNA-Arg"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:4946..4948,aa:Arg,seq:acg)
     gene            5009..5082
                     /locus_tag="O7798_002300"
     tRNA            5009..5082
                     /locus_tag="O7798_002300"
                     /product="tRNA-Pro"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:5043..5045,aa:Pro,seq:tgg)
     gene            5106..5181
                     /locus_tag="O7798_002301"
     tRNA            5106..5181
                     /locus_tag="O7798_002301"
                     /product="tRNA-Ala"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:5139..5141,aa:Ala,seq:tgc)
     gene            5304..>5535
                     /locus_tag="O7798_002302"
     rRNA            5304..>5535
                     /locus_tag="O7798_002302"
                     /product="16S ribosomal RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00177"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00177"
BASE COUNT         1865 a          781 c         1205 g         1684 t
ORIGIN      
        1 taaacatttt tctgataaaa atatccagtg aatgataaga taataaacgt acatactaat
       61 aactagtaaa tagcaggagt aaattttatt agagttaaac aatacataat taaagggtgg
      121 ttaacatgac taaaacaaaa attatgggca tattaaacgt cacacctgat tcattctcag
      181 atggtggaaa atttaataat gttgaatcag ctataaatag agtgaaagcc atgatagatg
      241 aaggtgctga cattatagat gttggaggtg tttcaacgag acccggtcat gaaatggttt
      301 cattagaaga agagatgaac agagtattac ctgttgttga agctattgtc ggttttgatg
      361 taaaaatttc agtcgataca tttcgaagtg aggttgctga agcatgttta aaattaggcg
      421 ttgatatgat taatgatcaa tgggcgggtc tgtatgatca tcgtatgttc caaattgtag
      481 ctaaatatga cgcggaaatt attttaatgc ataatggaaa tggtaatcgt gatgaaccgg
      541 ttgtcgaaga aatgttaaca tctttgttag cacaagcaca tcaagctaaa atagctggta
      601 taccttcaaa taaaatttgg ctagatccag gtataggttt cgctaaaact agaaatgaag
      661 aagccgaagt tatggcaaga ctggatgaac ttgttgcaac agaatatcca gttttattag
      721 cgacaagccg gaaacgtttc actaaagaga tgatgggtta tgatacaaca ccggttgaaa
      781 gagatgaagt aactgcagct acgactgcat atggtattat gaaaggcgtt agagcagtac
      841 gcgttcataa tgtcgagttg aatgctaaat tagctaaagg tatagatttt ttaaaggaga
      901 atgaaaatgc aagacacaat ctttcttaaa ggtatgcgct tttatggata tcatggtgct
      961 ttatcagctg aaaatgaaat agggcaaatt ttcaaagtgg atgtaacttt gaaagtagac
     1021 ttagctgaag ctgggcgtac tgataatgtt attgatacag ttcattatgg tgaagtgttc
     1081 gaagaggtta aatcaattat ggaaggtaag gccgttaatt tacttgagca tctagctgaa
     1141 cgtattgcaa atcgtataaa ttcacaatat aatcgtgtaa tggaaacgaa agtgagaatc
     1201 actaaagaaa acccaccgat tccgggtcat tatgatggag taggtatcga aatagtgagg
     1261 gagaataaat gattcaagca tacttaggat taggtagtaa tattggtgat agagaaagcc
     1321 agttaaacga tgctataaag attttgaatg aatatgatgg tattaacgta tctaatattt
     1381 ctccgattta tgaaacagca ccagttgggt atactgagca acctaacttt ttaaatttgt
     1441 gtgttgaaat tcaaacaaca ctcacagtat tacaactgtt ggaatgttgt ttgaagacag
     1501 aagaatgttt acaccgtatt agaaaggaac gatggggtcc tagaacttta gatgtggata
     1561 ttttgttgta tggagaagaa atgatagatt taccaaaact gtcggtgcca catccgagaa
     1621 tgaatgaacg tgcatttgtt ttaatcccat taaatgatat agcagcaaat gtcgtagaac
     1681 cacgttcgaa attgaaagtg aaagatttag tttttgtcga tgacagtgta aagagatata
     1741 aataatgtat tgttgagaac attcatattt attgggaata gattattgat tattggagat
     1801 gtttccgcat tttgattatc tctaaatgca tttgatttcg aattagtata tgatgattta
     1861 gtatgtgtta gaattaagtt atttcataaa atcaaagtaa gcaatatttg ataaattgct
     1921 gtaatttatt taggcttttg ttgaagtttg tggaagataa tttttataca tttacttagg
     1981 gttgtattaa tgataatcgt attttaaatg aataagtaat tcataaacga aaacagaaat
     2041 tgctttatta catttacaag ctcttgtaaa attaaaaaag tgataaaatt gatgttatga
     2101 atataagaaa acatgccaca tcataacttt aaggtgtaat ggttaatgat aaagtattag
     2161 aaacatcgaa agagatgtat gttgagcaaa aatgtctgat attttataaa actttaaagg
     2221 aaaatgtttg agtgtaccag ttggaatact aaaggattac aacaagttaa aggagagaaa
     2281 gttatgtcag aagaaatgaa tgaccaaatg ttggttcgac gtcaaaaatt acaagaatta
     2341 tatgatcttg gtatagaccc gtttggttct aaatttgacc gttcaggttt atctagtgat
     2401 ttgaaagaag agtgggacca gtattctaaa gaagaattgg tagaaaaaga agcggatagt
     2461 catgtcgcta tagctggacg attaatgact aagcgtggta aaggtaaagc aggatttgca
     2521 cacgttcagg acttagctgg acaaattcaa atttacgttc gtaaagatca agttggcgat
     2581 gacgaatttg atttatggaa aaatgctgat ttaggcgata tcgttggtgt tgaaggtgta
     2641 atgttcaaaa caaatactgg cgaattatcg gttaaagcga agaaattcac gctactaact
     2701 aaatcattgc gaccattacc ggataaattc cacggtttac aggatattga acagagatat
     2761 cgtcaaagat atttagattt aattacgaac gaagatagca ctcgtacatt tattaatcgt
     2821 agtaaaatca ttcaagaaat gcgtaattat ttaaataata aaggtttctt ggaagtagaa
     2881 acacctatga tgcaccaaat tgctggtgga gcagctgcta gaccatttgt aacacatcat
     2941 aatgcattag atgcaacgtt atacatgcgt attgctattg agttgcattt aaaacgttta
     3001 attgtcggtg gacttgaaaa agtatatgaa attggtagag tattccgtaa tgaaggtgta
     3061 tcaactagac ataaccctga attcacaatg attgaattat atgaagcata tgcagattat
     3121 catgacatta tggatttaac agaatctatg gtgagacata ttgccaatga agtgttaggt
     3181 tctgcaaaag tacaatacaa tggggaaacg attgatttag aatctgcttg gactcgtttg
     3241 catattgttg atgctgtaaa agaagctact ggtgtagatt tttatgaagt taaaagtgat
     3301 gaagaagcta aagctttagc taaagaacat ggtattgaaa ttaaagatac aatgaaatat
     3361 ggtcatattt taaatgaatt ctttgagcaa aaagttgaag aaacacttat tcagccaacg
     3421 tttatctatg gtcatccgac tgaaatttca cctttagcga agaaaaatcc tgaagatcct
     3481 agatttactg atcgtttcga attgttcatt gtaggtagag agcatgcaaa tgcatttact
     3541 gaattaaatg atcctattga tcaaaaaggt cgttttgaag cgcaacttgt tgaaaaagcg
     3601 caaggtaatg atgaagcgca tgaaatggat gaagattaca ttgaagcgtt agaatatggt
     3661 atgcctccga caggtggtct tggtatcggt attgacagat tggttatgtt attaactgac
     3721 tctccatcaa tcagagacgt attattattc ccttatatga gacaaaaata aatgacgttg
     3781 attgttagta agagctctcg tgtatacaac atgtgtatgc gagggctttc ttaattatgg
     3841 taattagttc gtgtttgaat gtttttgata gtaatagtta acgatagtgg tgctattttt
     3901 gactgttaaa caaggtagtt ggctgataga tgaaaatgac gatacgtata tagagtagtt
     3961 cggatgagaa atgttaacga tagacattga gatatcttat aacaaaaatt gctatattag
     4021 tataatttat cttaatcagc tataaaagta ctttaaaatt gtatagaatg tgtatggttt
     4081 tgtacatatg tgtatgatag aatactaaaa gtgttatgaa ttagagggca cgagaaatgt
     4141 cagttttgaa gaataaaaaa gttgattaaa agtgttgact ttatcaattg aatgaagtaa
     4201 tatataaaag tcgtcaaaaa cagacgaaac acactaaaag ctgatgtgac aaagtttaca
     4261 tcaaagtgta aaattaacta ttgcacctta ttaattaagc gtgtatcatg aataagtaag
     4321 ttattttgtc tggtgactat agcaaggagg tcacacctgt tcccatgccg aacacagaag
     4381 ttaagctcct tagcgtcgat ggtagtcgaa cttacgttcc gctagagtag aacgttgcca
     4441 ggcaaatgac aaatcggaga attagctcag ctgggagagc atctgcctta caagcagagg
     4501 gtcggcggtt cgaacccgtc attctccacc atttattctt agatatagcc ggcctagctc
     4561 aattggtaga gcaactgact tgtaatcagt aggttggggg ttcaagtcct ctggccggca
     4621 ccatcttttg agccattagc tcagctggta gagcatctga cttttaatca gagggtcaga
     4681 ggttcgaatc ctctatggct cattacgatt taatttttat atttagcaaa ataatgcaga
     4741 agtagttcag cggtagaata caaccttgcc aaggttgggg tcgcgggttc gaatcccgtc
     4801 ttctgctcca ttattttgcc ggggtggcgg aactggcaga cgcacaggac ttaaaatcct
     4861 gcggtgagag atcaccgtac cggttcgatt ccggtcctcg gcaccatttt agcgcccgta
     4921 gctcaattgg atagagcgtt tgactacgga tcaagaggtt atgggttcga ctcctatcgg
     4981 gcgcgccatt tttaaattaa ttgaataacg ggaagtagct cagcttggta gagcacttgg
     5041 tttgggacca aggggtcgca ggttcgaatc ctgtcttccc gattacttct taaattccat
     5101 tttatggggg cttagctcag ctgggagagc gcctgctttg cacgcaggag gtcagcggtt
     5161 cgatcccgct agtctccacc atttattttt tacacgatga acattgaaaa ctgaatgaca
     5221 atatgtcaac gttaattcca aaaaacgtaa ctataagtta caaacattat ttagtattta
     5281 tgagctaatc aaacatcata atttttatgg agagtttgat cctggctcag gatgaacgct
     5341 ggcggcgtgc ctaatacatg caagtcgagc gaacggacga gaagcttgct tctctgatgt
     5401 tagcggcgga cgggtgagta acacgtggat aacctaccca taagactggg ataacttcgg
     5461 gaaaccggag ctaataccgg ataatatttt gaaccgcatg gttcaaaagt gaaagacggt
     5521 cttgctgtca cttat
//
LOCUS       DALPQQ010000138         5433 bp    DNA     linear   BCT 22-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus strain K18-6-464
            SAMD00233528-rid16434743.denovo.139, whole genome shotgun sequence.
ACCESSION   DALPQQ010000138 DALPQQ010000000
VERSION     DALPQQ010000138.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMD00233528
            Sequence Read Archive: DRR236061
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 5433)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5433)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001543423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001543423.1
            Genome Coverage       :: 77x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/22/2022 17:09:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,811
            CDSs (total)                      :: 2,743
            Genes (coding)                    :: 2,689
            CDSs (with protein)               :: 2,689
            Genes (RNA)                       :: 68
            rRNAs                             :: 2, 4, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 4, 2 (16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 54
            CDSs (without protein)            :: 54
            Pseudo Genes (ambiguous residues) :: 0 of 54
            Pseudo Genes (frameshifted)       :: 27 of 54
            Pseudo Genes (incomplete)         :: 27 of 54
            Pseudo Genes (internal stop)      :: 10 of 54
            Pseudo Genes (multiple problems)  :: 10 of 54
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5433
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMD00233528-rid16434743.denovo.139"
                     /strain="K18-6-464"
                     /db_xref="taxon:1280"
                     /geo_loc_name="Japan: Niigata"
     gene            complement(102..1901)
                     /locus_tag="O7798_002303"
     CDS             complement(102..1901)
                     /locus_tag="O7798_002303"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500174.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA primase"
                     /protein_id="HDC2864503.1"
                     /translation="MRIDQSIINEIKDKTDILDLVSEYVKLEKRGRNYIGLCPFHDEK
                     TPSFTVSEDKQICHCFGCKKGGNVFQFTQEIKDISFVEAVKELGDRVNVAVDIEATQS
                     NSNVQIASDDLQMIEMHELIQEFYYYALTKTVEGEQALTYLQERGFTDALIKERGIGF
                     APDSSHFCHDFLQKKGYDIELAYEAGLLSRNEENFSYYDRFRNRIMFPLKNAQGRIVG
                     YSGRTYTGQEPKYLNSPETPIFQKRKLLYNLDKARKSIRKLDEIVLLEGFMDVIKSDT
                     AGLKNVVATMGTQLSDEHITFIRKLTSNITLMFDGDFAGSEATLKTGQNLLQQGLNVF
                     VIQLPSGMDPDEYIGKYGNDAFTAFVKNDKKSFAHYKVSILKDEIAHNDLSYERYLKE
                     LSHDISLMKSSILQQKALNDVAPFFNVSPEQLANEIQFNQAPANYYPEDEYGGYIEPE
                     PIGMAQFDNLSRQEKAERAFLKHLMRDKDTFLNYYESVDKDNFTNQHFKYVFEVLHDF
                     YAENDQYNISDAVQYVNSNELRETLISLEQYNLNDEPYENEIDDYVNVINEKGQETIE
                     SLNHKLREATRIGDVELQKYYLQQIVAKNKERM"
     gene            complement(1962..2780)
                     /locus_tag="O7798_002304"
     CDS             complement(1962..2780)
                     /locus_tag="O7798_002304"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500175.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="kinase/pyrophosphorylase"
                     /protein_id="HDC2864504.1"
                     /translation="MEKIKIIVASDSIGETAELVARAGISQFNPKQCKNELLRYPYIE
                     SFEDVDEVIQVAKDTNAIIVYTLIKPEMKQYMSEKVAEFQLKSVDIMGPLMDLLSASV
                     EEKPYNEPGIVHRLDDAYFKKIDAIEFAVKYDDGKDPKGLPKADIVLLGISRTSKTPL
                     SQYLAHKSYKVMNVPIVPEVTPPDGLYDINPKKCIALKISEEKLNRIRKERLKQLGLG
                     DTARYATEARIQEELNYFEEIVSEIGCPVIDVSQKAIEETANDIIHYIEQNKSK"
     gene            complement(2791..3414)
                     /locus_tag="O7798_002305"
     CDS             complement(2791..3414)
                     /locus_tag="O7798_002305"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001797828.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HDC2864505.1"
                     /translation="MELSQRQERIIEIVKTKGPITGEQIADKLNLTRATLRPDLAILT
                     MSGFLEARPRVGYYYSGKSKGKFFNEKLRQFEVKDYMSQPVVLRENTTVYDAICTIFL
                     EDVSTLFIINEDNDFVGVCSRKDLLRASMIGADIHKVPISVNMTRMPNVTYLEESELV
                     IYAADRMIEKEIDSIPIVRKKDNQKYEVIGRISKTTIAKLLVALYKE"
     gene            3749..5140
                     /locus_tag="O7798_002306"
     CDS             3749..5140
                     /locus_tag="O7798_002306"
                     /EC_number="6.1.1.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500177.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycine--tRNA ligase"
                     /protein_id="HDC2864506.1"
                     /translation="MAKDMDTIVSLAKHRGFVFPGSDIYGGLSNTWDYGPLGVELKNN
                     VKKAWWQKFITQSPFNVGIDAAILMNPKVWEASGHLNNFNDPMIDNKDSKIRYRADKL
                     IEDYMQDVKGDENFIADGLSFEQMKKIIDDEGIVCPVSKTANWTEIRQFNLMFKTFQG
                     VTEDSTNEIFLRPETAQGIFVNYKNVQRSMRKKLPFGIGQIGKSFRNEITPGNFIFRT
                     REFEQMELEFFCKPGEEIEWQNYWKTFASDWLTSLNMSSENMRLRDHDEDELSHYSNA
                     TTDIEYKFPFGWGELWGIASRTDFDLRKHAEHSGEDFRYHDPETNEKYIPYCIEPSLG
                     ADRVTLAFLCDAYDEEGVEGSKDARTVLHFHPALAPYKAAILPLSKKLSGEAIKIFEQ
                     LSSKFSIDFDESQSIGKRYRRQDEIGTPYCVTFDFDSLEDNQVTVRDRDSMEQVRMPI
                     SELEAFLTEKTKF"
     gene            complement(5290..>5433)
                     /gene="recO"
                     /locus_tag="O7798_002307"
     CDS             complement(5290..>5433)
                     /gene="recO"
                     /locus_tag="O7798_002307"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500178.1"
                     /note="involved in DNA repair and RecFOR pathway
                     recombination; RecFOR proteins displace ssDNA-binding
                     protein and facilitate the production of RecA-coated
                     ssDNA; Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA repair protein RecO"
                     /protein_id="HDC2864507.1"
                     /translation="IDKMNSLNIHQEIIDEMSDIILMLYREYAGMFFKSQKLINQLKR
                     LEQ"
BASE COUNT         1741 a          939 c          787 g         1966 t
ORIGIN      
        1 aatatttatt tttcaatagt gttgtttaaa tgcggtaact atcatttacc cttatacatt
       61 ttgacataat cattattcgt attattcttt aaaatcacat gctacatgcg ttctttattc
      121 ttagcaacaa tttgctgtaa atagtatttt tgtaattcta catcgccaat ccttgtagct
      181 tcccttaatt tatgattcaa tgactcaatt gtttcttgtc ctttttcatt aataacattg
      241 acataatcat caatttcatt ttcatatggt tcgtcattca aattatattg ttctaagcta
      301 attagtgttt ctctcaactc atttgaatta acatactgca cagcatcact gatattatat
      361 tgatcatttt ccgcataaaa atcatgtaag acttcgaata catatttaaa atgctgattt
      421 gtgaagttat ccttatcaac actttcataa taatttaaaa atgtatcttt atctctcatt
      481 aaatgtttta aaaatgctcg ctccgctttt tcttgacggc tcaaattgtc aaattgtgcc
      541 ataccaattg gctcaggttc aatgtaaccg ccatactcat cttctggata ataattggct
      601 ggtgcttgat tgaattgtat ttcgttagct aattgctcag gactaacatt gaaaaatggt
      661 gcaacatcat ttaaagcctt ttgttgcaaa atcgatgatt tcataagcga aatatcatga
      721 cttagttctt tcaaataacg ttcatatgaa aggtcattat gtgcaatttc atcttttaat
      781 atactcactt tataatgtgc aaatgacttt ttgtcatttt ttacaaaagc agtaaatgca
      841 tcgttgccat acttaccaat gtattcatcc ggatccatgc ctgatggcaa ttgtataaca
      901 aatacattta gcccttgctg taacaaattt tgacctgttt taagtgttgc ttcactaccc
      961 gcaaaatccc catcaaacat taatgttata tttgatgtta actttcgtat aaaagtaata
     1021 tgttcatctg acaactgtgt acccattgtt gcaacaacgt ttttcaagcc agcagtatca
     1081 gattttataa catccataaa accttctagt aatacgattt catctaattt tctaattgat
     1141 ttacgcgctt tatctaagtt gtataacaac tttctttttt gaaagatagg tgtttcagga
     1201 ctatttaagt attttggttc ttgaccggta tatgttcgac ctgaatatcc aacaattctt
     1261 ccttgcgcat ttttcaaagg aaacataata cgatttcgaa atctatcgta ataactgaaa
     1321 ttttcttcgt tacgtgataa taatccggct tcatatgcta attcaatatc gtaacccttt
     1381 ttttgaagaa aatcatgaca aaaatgtgag ctatcgggtg caaagccaat gcctcgctct
     1441 ttaataagcg catctgtaaa accacgttct tgtaagtacg ttaatgcttg ttcgccttcg
     1501 actgtctttg ttaaagcgta ataataaaat tcttgtatta actcatgcat ttcaatcatt
     1561 tgtaaatcat cagaagcaat ttgaacattt gagttagatt gtgttgcctc aatatctaca
     1621 gcaacattaa ctctatcacc taattcttta accgcttcaa caaatgatat gtctttaatt
     1681 tcttgagtaa attgaaaaac attgccacct tttttacaac caaaacaatg acaaatttgt
     1741 ttatcttcag aaactgtaaa tgaaggtgtc ttttcatcat gaaaaggaca caaacctata
     1801 taattgcgtc ctctcttttc taattttaca tattcactta ccaagtctaa aatgtcggtt
     1861 ttatctttta tttcattaat gatcgattga tctattcgca aattaaatca cctattaagc
     1921 attagttata ctattatacc taattttcga caaaaatgaa atcatttcga tttattttgt
     1981 tcaatataat ggattatatc gtttgctgtt tcttcgattg ctttttgaga aacatcaatg
     2041 acaggacatc caatttcact tacgatttct tcaaagtaat tcaattcttc ttgaattcgt
     2101 gcttctgttg catatcgagc tgtgtcacct agtcctaatt gttttagtcg ctcttttcta
     2161 atgcgattta atttttcttc acttatttta agtgcgatac atttctttgg attaatatca
     2221 tataagccat ctggcggtgt cacttctggt acaatcggta cattcataac tttgtaactc
     2281 ttatgcgcta aatactgaga taatggtgtc tttgaagttc tcgaaatacc aagtaaaaca
     2341 atatcagctt taggtaatcc tttaggatct ttaccatcat catatttaac tgcaaactct
     2401 atcgcatcaa ttttcttgaa atatgcatca tctaatctat gaacgatacc tggctcatta
     2461 taaggttttt cttcaaccga agcagataat aaatccatta atggccccat gatatcgaca
     2521 gacttcaatt ggaattctgc tactttctca ctcatatatt gcttcatttc aggtttaata
     2581 agtgtataaa caatgatagc atttgtatct tttgcaactt gaatcacttc atcaacatct
     2641 tcaaaagatt caatatatgg atatcttaat aattcatttt tacattgctt aggattgaat
     2701 tgtgaaatac ctgccctagc aactaactct gccgtttcac ctatagaatc tgaagctacg
     2761 ataattttaa ttttttccat tacttctcac ctattcttta tataatgcta ctaataactt
     2821 agctattgtt gttttggaaa ttcttccaat tacttcatac ttttgattat ctttttttct
     2881 tacaattgga atcgaatcaa tttctttttc aatcattcta tctgctgcgt atatgactaa
     2941 ttcgctttcc tctaaataag tgacattagg catacgtgtc atatttacac tgataggtac
     3001 tttatgaata tctgctccaa tcattgaagc tcttaataaa tcttttcttg aacacacacc
     3061 aacaaaatcg ttatcttcat taataataaa taatgtactt acatcttcta aaaaaattgt
     3121 acaaatagcg tcataaactg ttgtattctc tcttagcaca acaggttgag acatatagtc
     3181 cttaacctca aattgtcgaa gtttttcatt aaaaaatttg ccttttgatt tacctgaata
     3241 ataatatcca actcggggac gcgcttctaa aaaacctgac attgttaata tcgctaaatc
     3301 tggtctaagc gttgctcttg ttaaattcaa cttatctgct atttgttcac cagtaatggg
     3361 tcctttagtt ttaacaattt cgatgattcg ttcttgtctt tgactgagtt ctataggtct
     3421 tcaccccttt tttattcacc tattattata ccgatatttc tttcatgtca caaacacatt
     3481 aattttactt gcctttaaat aatctatcaa ttagaataaa cgtacagcga gttaaggata
     3541 gtgtaagctt aacaataaga ttggcgcaac gaatcatttt aaaataaaag cgagtgacta
     3601 cactaatttg ggtggaaccg cgggttaaat acgtaactta ttttgtatta tatacaattt
     3661 aaaatattaa ctcgtcccat ggaagtaaag catatttact atgctgttat tttccatggg
     3721 gcgttttcat gtatgaggag aggtaattat ggcaaaagat atggatacaa ttgtttcatt
     3781 agcaaaacac agaggttttg tgttccctgg tagtgatatt tacggtggtt tatcaaacac
     3841 atgggattat ggtcctttag gtgttgaatt aaagaataat gttaaaaaag cttggtggca
     3901 aaaattcatt acacaatcac cgtttaacgt tggtatcgat gctgcaatct taatgaatcc
     3961 aaaagtatgg gaagcttcag gacacttaaa caacttcaac gacccaatga ttgataataa
     4021 agatagtaaa attcgatatc gcgctgataa attaattgaa gattatatgc aagatgttaa
     4081 aggtgatgaa aacttcattg ccgatggttt aagttttgaa caaatgaaaa aaattattga
     4141 cgatgaaggt attgtttgtc ctgtaagtaa aactgctaac tggactgaaa ttcgccaatt
     4201 caatttaatg tttaaaacat tccaaggtgt aactgaagat tctacaaatg aaattttctt
     4261 acgtcctgaa acagcacaag gtatttttgt aaactataaa aacgtgcaac gttcaatgcg
     4321 taaaaaatta ccatttggta tcggtcaaat tggtaaatca ttccgtaatg aaatcactcc
     4381 aggtaacttc attttcagaa caagagaatt tgaacaaatg gaacttgaat tcttctgtaa
     4441 acctggagaa gaaatcgaat ggcaaaatta ttggaaaact tttgcaagtg actggttaac
     4501 aagcttaaat atgagcagtg aaaatatgcg tttacgtgat catgatgaag atgaattatc
     4561 tcattactca aatgcaacaa ctgatattga atataaattc ccatttggtt ggggtgagtt
     4621 atggggtatc gcaagtcgta cagacttcga cttacgtaaa catgctgaac actctggtga
     4681 agatttcaga taccatgatc cagaaacgaa cgaaaaatat attccatatt gtatcgagcc
     4741 atcacttggt gcagatcgtg taacattagc tttcttatgt gatgcatatg atgaagaagg
     4801 cgttgaaggt agtaaagatg cacgtacagt tttacacttc catcctgcat tagcaccata
     4861 taaagcagcg attttacctt taagtaagaa attatctggc gaagcgatta agatttttga
     4921 gcaattaagt tctaaattct caatcgattt cgatgaatca caatctatcg gtaaaagata
     4981 ccgtcgtcaa gatgaaatcg gtacacctta ttgtgtaaca ttcgactttg attcattaga
     5041 agataatcaa gttacagtac gtgacagaga ttcaatggaa caagttcgta tgccaatctc
     5101 agagttagaa gctttcttaa ctgaaaaaac aaaattctaa ttaaaaagac tttccaccat
     5161 atgtggtggc tatataattt ataaaaagag atactggtta gtaaaattgc cagtatctct
     5221 tttctattca aaaaggtatt caaataaaca catctatgtg gctacttgaa taccttttat
     5281 tattttatgt tattgttcca atctttttaa ttggttgatt agtttctgac ttttaaaaaa
     5341 catacctgca tattcacgat ataacattaa aatgatatct gacatttcat caataatttc
     5401 ttgatggata ttcaatgaat tcattttatc tat
//
LOCUS       DALPQQ010000139         5352 bp    DNA     linear   BCT 22-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus strain K18-6-464
            SAMD00233528-rid16434743.denovo.140, whole genome shotgun sequence.
ACCESSION   DALPQQ010000139 DALPQQ010000000
VERSION     DALPQQ010000139.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMD00233528
            Sequence Read Archive: DRR236061
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 5352)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5352)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001543423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001543423.1
            Genome Coverage       :: 77x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/22/2022 17:09:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,811
            CDSs (total)                      :: 2,743
            Genes (coding)                    :: 2,689
            CDSs (with protein)               :: 2,689
            Genes (RNA)                       :: 68
            rRNAs                             :: 2, 4, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 4, 2 (16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 54
            CDSs (without protein)            :: 54
            Pseudo Genes (ambiguous residues) :: 0 of 54
            Pseudo Genes (frameshifted)       :: 27 of 54
            Pseudo Genes (incomplete)         :: 27 of 54
            Pseudo Genes (internal stop)      :: 10 of 54
            Pseudo Genes (multiple problems)  :: 10 of 54
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5352
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMD00233528-rid16434743.denovo.140"
                     /strain="K18-6-464"
                     /db_xref="taxon:1280"
                     /geo_loc_name="Japan: Niigata"
     gene            97..783
                     /locus_tag="O7798_002308"
     CDS             97..783
                     /locus_tag="O7798_002308"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499988.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DnaD domain-containing protein"
                     /protein_id="HDC2864508.1"
                     /translation="MDKYQLKARPVVIRRELLDHYSDLGLDEQDLVILLKLIYASETS
                     NKQPSIELLQKGSTMQPRDITMVIQNLIQRELLELQVQKDEEGRFTEYMNLDPFFEKL
                     SHILKQQSMETKELNSKEKFKQLFRVLEDTFARPLSPYEIETLNQWIDVDKHDTAIIQ
                     AALDEANSLNKLSFKYIDRILLNWKKNNVKTIDDSRKIREKFNKPKMTHTVKTVPKFD
                     WLNGENLDGK"
     gene            773..1432
                     /gene="nth"
                     /locus_tag="O7798_002309"
     CDS             773..1432
                     /gene="nth"
                     /locus_tag="O7798_002309"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499987.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="endonuclease III"
                     /protein_id="HDC2864509.1"
                     /translation="MVSKKKALEMIDVIANMFPDAECELKHDNPFELTIAVLLSAQCT
                     DVLVNRVTTELFKKYKTPEDYLAVSDEELMNDIRSIGLYRNKAKNIKKLCQSLIDQFN
                     GEIPQTHKELESLAGVGRKTANVVMSVAFDEPSLAVDTHVERVSKRLGINRWKDNVRQ
                     VEDRLCSVIPRDRWNRSHHQLIFFGRYHCLARKPKCDICPLLEDCREGQKRYKASLKE
                     A"
     gene            1437..1778
                     /locus_tag="O7798_002310"
     CDS             1437..1778
                     /locus_tag="O7798_002310"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499986.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDC2864510.1"
                     /translation="MTNITKEVFDNLEQEIDLFAKNKTLGSSEAKPYLDEYHSKIIDY
                     FKQVNDITGNIDFDKLNQYPVVPMNFKERYDYMIERKYHFMGYRQMKTFKTELIKMNA
                     SYQTRLKNKQV"
     gene            complement(2344..4527)
                     /locus_tag="O7798_002311"
     CDS             complement(2344..4527)
                     /locus_tag="O7798_002311"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499985.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="penicillin-binding protein"
                     /protein_id="HDC2864511.1"
                     /translation="MTENKGSSQPKKNGNNGGKSNSKKNRNVKRTIIKIIGFMIIAFF
                     VVLLLGILLFAYYAWKAPAFTEAKLQDPIPAKIYDKNGELVKTLDNGQRHEHVNLKDV
                     PKSMKDAVLATEDNRFYEHGALDYKRLFGAIGKNLTGGFGSEGASTLTQQVVKDAFLS
                     QHKSIGRKAQEAYLSYRLEQEYSKDDIFQVYLNKIYYSDGVTGIKAAAKYYFNKDLKD
                     LNLAEEAYLAGLPQVPNNYNIYDHPKAAEDRKNTVLYLMHYHKRITDKQWEDAKKIDL
                     KANLVNRTPEERQNIDTNQDSEYNSYVNFVKSELMNNKAFKDENLGNVLQSGIKIYTN
                     MDKDVQKTLQNDVDNGSFYKNKDQQVGATILDSKTGGLVAISGGRDFKDVVNRNQATD
                     PHPTGSSLKPFLAYGPAIENMKWATNHAIQDESSYQVDGSTFRNYDTKSHGTVSIYDA
                     LRQSFNIPALKAWQSVKQNAGNDAPKKFAAKLGLNYEGDIGPSEVLGGSASEFSPTQL
                     ASAFAAIANGGTYNNAHSIQKVVTRDGETIEYDHTSHKAMSDYTAYMLAEMLKGTFKP
                     YGSAYGHGVSGVNMGAKTGTGTYGAETYSQYNLPDNAAKDVWINGFTPQYTMSVWMGF
                     SKVKQYGENSFVGHSQQEYPQFLYENVMSKISSRDGEDFKRPSSVSGSIPSINVSGSQ
                     DNNTTNRSTHGGSDTSANSSGTAQSNNNTRSQQSRNSGGLTGIFN"
     gene            complement(4524..5201)
                     /gene="recU"
                     /locus_tag="O7798_002312"
     CDS             complement(4524..5201)
                     /gene="recU"
                     /locus_tag="O7798_002312"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499984.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Holliday junction resolvase RecU"
                     /protein_id="HDC2864512.1"
                     /translation="MLCIINNVYYQTCVVKFMNYPNGKPYRKNSAIDGGKKTAAFSNI
                     EYGGRGMSLEKDIEHSNTFYLKSDIAVIHKKPTPVQIVNVNYPKRSKAVINEAYFRTP
                     STTDYNGVYQGYYIDFEAKETKNKTSFPLNNIHDHQVEHMKNAYQQKGIVFLMIRFKT
                     LDEVYLLPYSKFEVFWKRYKDNIKKSITVDEIRKNGYHIPYQYQPRLDYLKAVDKLIL
                     DESEDRV"
BASE COUNT         1811 a          840 c          892 g         1809 t
ORIGIN      
        1 ttgctactag ttaaatatat taagcatttt agtcgaaaat taaagaaaat gatttatact
       61 attaagtaat ggttaaattt aaaagggggt acgaacatgg ataaatatca attaaaagca
      121 agacctgtag tgatacgaag agaattatta gaccattaca gtgacttagg tttagatgag
      181 caagatttag tcattttgct taaattgatt tatgcttccg aaacatcaaa taaacagcct
      241 tcaattgaat tgcttcagaa gggctcaact atgcaaccac gtgatattac aatggttatt
      301 caaaatttga tacaacgtga attgctagaa ttacaagttc aaaaagatga agaaggtaga
      361 tttaccgaat atatgaatct agatcctttt ttcgaaaaat taagtcatat attgaagcaa
      421 caaagtatgg aaacgaaaga gctaaatagt aaagaaaaat ttaaacaatt atttagagtt
      481 ttagaggata catttgcaag gccgttatct ccatatgaaa tagaaacgtt aaatcaatgg
      541 attgatgttg ataaacacga tactgcaatt atacaagcgg cattagacga ggcgaatagt
      601 ttgaataaac ttagctttaa atatatagat cgtattttac ttaattggaa gaaaaacaat
      661 gtcaaaacaa ttgacgattc tagaaaaata agagaaaaat tcaataaacc gaaaatgaca
      721 cacacagtta aaacggtacc taaatttgat tggttaaacg gggagaacct tgatggtaag
      781 taagaaaaaa gcattagaaa tgattgatgt tatagcaaat atgtttccgg atgcagaatg
      841 tgaattaaaa catgataatc cgttcgaatt aactattgct gtattattgt cagcgcaatg
      901 tacagacgtt ctagtaaata gagtaacaac tgagctgttt aaaaaataca aaacgcctga
      961 agattatttg gcagtcagtg atgaagaact tatgaatgat attcgttcta tcggtctgta
     1021 tcgtaacaaa gctaagaata ttaagaaact ttgtcaatct ttgattgatc aatttaatgg
     1081 agaaatacca caaacacata aggaattaga aagtttagca ggtgtaggac gtaaaactgc
     1141 taatgtagtc atgagtgtag catttgatga accttcatta gctgttgata cgcatgtaga
     1201 acgtgtttct aaacgcttag gtattaatcg ttggaaagat aatgtgagac aggtagaaga
     1261 ccgtttatgt tctgtcatac ctagagatag atggaatagg agccatcatc aactcatttt
     1321 ctttggaaga taccactgtt tagcccgaaa acctaaatgc gatatttgtc cactattaga
     1381 agattgtaga gaaggacaaa aacgttataa agctagtttg aaagaagcgt gataacatga
     1441 caaatattac aaaagaggta tttgataatt tagaacaaga gattgattta tttgccaaaa
     1501 ataagacatt aggttctagt gaagcaaagc cctacttgga tgaataccat agtaaaatta
     1561 ttgattattt taagcaggtt aatgacataa ctggcaatat tgattttgat aaattaaatc
     1621 aatatcctgt tgtgccaatg aattttaaag aaagatatga ttatatgatt gaacgtaaat
     1681 atcattttat gggctatcga caaatgaaga cctttaaaac tgaattgatt aaaatgaatg
     1741 ctagttatca aacaaggtta aagaataagc aggtatagac aagattgatc atttcctaat
     1801 gttgaaaata tataaaacta attcatgcac acatatttat aattatgtta ggtgtcgtgt
     1861 cattacaacg tcttaatata aaaactgtcc atctacatca taatggatat cttgagatat
     1921 gctttaagat atctatttcg aatcgtaggt ggatttctta tatctatgat tgtgaaaata
     1981 tgttgcaaac atgttgatat ttcactgatt aacgtacaca gggaattaat aaatatatca
     2041 atttaaaaca gcgtctaaga tgactatgag aaaatataat cataatttta aaaatgggaa
     2101 caaccactta ttcaaattca ataattttac atagctaaag atgtgaatat gaaaaactat
     2161 ttagatgttt caaaatgtat gtgaatgact gattttacgg tttctactaa tatagcaata
     2221 gcgtatgaat acttataaaa aaagcaggaa gttttacctt cccaccataa aagatgaaga
     2281 acctaaaaaa atcctcggct acaccataaa tatggtataa ctgaggattt tatgttgagt
     2341 ggattagttg aatatacctg ttaatccacc gctgtttcta gattgttgag atctagtatt
     2401 gttatttgat tgtgcagtac cactgctgtt tgctgatgtg tcactaccac cgtgtgtact
     2461 acgatttgta gtgttgttat cttgactacc agaaacattg attgatggga tactaccact
     2521 tactgagcta ggacgtttaa agtcttcgcc atctctagat gaaatttttg acatcacatt
     2581 ttcatataag aactgtggat attcttgttg gctatgtccc acaaatgagt tttcaccata
     2641 ttgtttaact ttactgaagc ccatccacac tgacatagtg tattgaggtg taaagccgtt
     2701 aatccacacg tctttcgctg cattatcagg taaattatat tgtgaataag tttcagcacc
     2761 gtaagtacca gtacctgtct tagcacccat atttactcca gatacaccat ggccatatgc
     2821 agaaccatat ggtttaaatg taccttttag catctcagct aacatgtatg cagtgtaatc
     2881 actcatcgct ttatggctag tatgatcgta ttcgattgtt tcaccatcac gagtaactac
     2941 tttttgaatt gaatgcgcgt tgttataagt accaccgtta gcgattgcag caaatgctga
     3001 tgctaattgt gttggtgaga attctgaagc agaaccacca agtacttcag atggaccaat
     3061 atcgccttcg tagtttaagc caagtttggc agcgaatttc ttaggtgcat cattaccagc
     3121 attttgctta actgattgcc aagcttttaa agctgggata ttgaaacttt gtcgtaaagc
     3181 atcataaata gatacagtac cgtgactctt cgtatcatag tttctaaatg tagaaccatc
     3241 aacttgatat gaagattcat cttgaatcgc atggtttgtt gcccatttca tattttcaat
     3301 ggcaggtcca tacgctaaga aaggttttaa agatgaacca gtagggtgag gatctgttgc
     3361 ttggtttctg ttaacgacgt ctttgaaatc acgtccacca gatatagcaa ctaaaccacc
     3421 agttttacta tcaagaattg ttgcaccaac ttgttggtct ttattcttgt agaagctacc
     3481 attatcaaca tcattttgta atgttttttg aacatcttta tccatgtttg tataaatttt
     3541 aataccactt tgtaatacat tacctaaatt ttcatctttg aatgctttat tattcattaa
     3601 ttcagatttt acaaagttaa cgtatgaatt atactcagaa tcttgatttg tatcaatgtt
     3661 ttgacgttct tcaggagtac gatttactaa gttcgctttt aaatcgattt tcttagcatc
     3721 ttcccactgt ttatctgtaa tgcgtttatg ataatgcatt aagtataaaa cagtgttttt
     3781 acgatcttca gcagcttttg gatgatcata aatattatag ttgtttggaa cctgaggtaa
     3841 accggctaaa taagcttctt ccgctaagtt taaatctttt aaatctttat taaagtaata
     3901 cttagcagca gctttaatac ctgttacgcc atcagaatag taaattttgt ttagatatac
     3961 ttggaagata tcatctttac tatactcttg ttctaaacga tatgataagt atgcttcttg
     4021 agctttacgt ccaatagatt tatgttgtga taaaaatgca tctttaacaa cttgttgtgt
     4081 taatgttgag gcaccttcag aaccaaatcc accagtcaag ttcttaccaa ttgcaccgaa
     4141 taaacgttta taatcaagtg cgccatgttc gtagaaacga ttgtcttcag ttgcaagtac
     4201 tgcgtctttc attgatttcg gcacgtcttt taaatttaca tgctcatgtc tttggccatt
     4261 atctaatgtt ttaacaagtt ctccgttctt gtcatatatc tttgcaggaa tcggatcttg
     4321 taatttagct tcggtaaaag caggtgcttt ccaagcataa taagcaaaca ataagatacc
     4381 tagtaaaaga acaacgaaaa atgcaataat catgaagcca ataatcttaa taatcgttct
     4441 cttcacattt ctattctttt ttgagttgga tttcccacca ttattaccgt ttttcttagg
     4501 ctgagaagat cctttgtttt ccgtcatacg cggtcctcac tttcatctaa tatcaactta
     4561 tcaactgctt ttagatagtc taatcttggt tgatactgat aaggaatatg gtaaccattt
     4621 tttcgtattt catcaactgt tatagacttt ttaatattat ctttatatct cttccaaaat
     4681 acttcgaatt ttgaataggg taaaagataa acttcatcta gcgttttaaa acgaatcatt
     4741 aaaaacacaa tacctttttg ttgatatgca tttttcatat gttcgacttg atggtcatga
     4801 atattattta aaggaaagga cgtcttgttt ttagtttcct ttgcttcaaa atcaatataa
     4861 taaccttgat aaacgccgtt gtaatcagtt gttgaaggtg tacgaaaata agcttcgtta
     4921 atcacagctt tactccgctt aggatagttg acattaacta tttgtactgg cgtaggcttt
     4981 ttgtgaataa ctgcaatgtc gcttttaaga taaaacgtat ttgaatgttc gatatctttt
     5041 tcaagtgaca taccacgtcc accatactca atattactaa aggcagcggt ctttttccct
     5101 ccgtctatag cactattttt acgatatggt ttaccatttg gataattcat aaatttcacc
     5161 acacaagttt ggtagtaaac gttgtttatt atacacaaca ttatagtgaa acaccaaact
     5221 taaattagta taaatgcgaa agacacaata caccaaagct tattttaacg tgatttcagc
     5281 attaacacaa taatattata atacatttac cgttaatgtt ggaattttac acacaatttt
     5341 aattaattga aa
//
LOCUS       DALPQQ010000140         5337 bp    DNA     linear   BCT 22-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus strain K18-6-464
            SAMD00233528-rid16434743.denovo.141, whole genome shotgun sequence.
ACCESSION   DALPQQ010000140 DALPQQ010000000
VERSION     DALPQQ010000140.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMD00233528
            Sequence Read Archive: DRR236061
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 5337)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5337)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001543423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001543423.1
            Genome Coverage       :: 77x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/22/2022 17:09:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,811
            CDSs (total)                      :: 2,743
            Genes (coding)                    :: 2,689
            CDSs (with protein)               :: 2,689
            Genes (RNA)                       :: 68
            rRNAs                             :: 2, 4, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 4, 2 (16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 54
            CDSs (without protein)            :: 54
            Pseudo Genes (ambiguous residues) :: 0 of 54
            Pseudo Genes (frameshifted)       :: 27 of 54
            Pseudo Genes (incomplete)         :: 27 of 54
            Pseudo Genes (internal stop)      :: 10 of 54
            Pseudo Genes (multiple problems)  :: 10 of 54
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5337
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMD00233528-rid16434743.denovo.141"
                     /strain="K18-6-464"
                     /db_xref="taxon:1280"
                     /geo_loc_name="Japan: Niigata"
     gene            198..500
                     /locus_tag="O7798_002313"
     CDS             198..500
                     /locus_tag="O7798_002313"
                     /EC_number="3.5.1.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001832402.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="urease subunit gamma"
                     /protein_id="HDC2864513.1"
                     /translation="MHFTQREQDKLMIVVAAEVARRRKARGLKLNHPEALALISDELL
                     EGARDGKTVAELMSYGRQILNKEDVMDGVEHMITDIEIEATFPDGTKLITVHHPIV"
     gene            514..924
                     /locus_tag="O7798_002314"
     CDS             514..924
                     /locus_tag="O7798_002314"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501021.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="urease subunit beta"
                     /protein_id="HDC2864514.1"
                     /translation="MIPGEIITKSTEVEINNHHPETVIEVENTGDRPIQVGSHFHFYE
                     ANAALDFEREMAYGKHLDIPAGAAVRFEPGDKKEVQLVEYAGKRKIFGFRGMVNGPID
                     ESRVYRPTDENDEYAGVFGDNGAENVNKKGGKRS"
     gene            921..2636
                     /gene="ureC"
                     /locus_tag="O7798_002315"
     CDS             921..2636
                     /gene="ureC"
                     /locus_tag="O7798_002315"
                     /EC_number="3.5.1.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002447295.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="urease subunit alpha"
                     /protein_id="HDC2864515.1"
                     /translation="MSFKMTQNQYTSLYGPTVGDSIRLGDTNLFAQIEKDYAVYGEEA
                     TFGGGKSIRDGMAQNPRVTRDDVNVADLVISNAVIIDYDKVVKADIGIKNGYIFAIGN
                     AGNPDIMDNVDIIIGSTTDIIAAEGKIVTAGGIDTHVHFINPEQAEVALESGITTHIG
                     GGTGASEGSKATTVTPGPWHIHRMLEAAEGLPINVGFTGKGQATNPTALIEQINAGAI
                     GLKVHEDWGATPSALSHALDVADEFDVQIALHADTLNEAGFMEDTMAAVKDRVLHMYH
                     TEGAGGGHAPDLIKSAAFSNILPSSTNPTLPYTHNTVDEHLDMVMITHHLNAAIPEDI
                     AFADSRIRKETIAAEDVLQDMGVFSMISSDSQAMGRVGEVITRTWQVAHRMKEQRGPL
                     DGDFEHNDNNRIKRYIAKYTINPAITHGISEYVGSIEPGKLADIVLWDPIFFGVKPEL
                     VVKGGLINSAVNGDANGSIPTSEPMKYRKMYGQYGGNLTSTSMTFVSKTAYENGINRA
                     LNLKRMVRPVKNIRQLSKADMKNNSATPKLDVDPQTYEVYVDGEKITSNAATELPLTQ
                     RYFLF"
     gene            2649..3101
                     /gene="ureE"
                     /locus_tag="O7798_002316"
     CDS             2649..3101
                     /gene="ureE"
                     /locus_tag="O7798_002316"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501023.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="urease accessory protein UreE"
                     /protein_id="HDC2864516.1"
                     /translation="MIVEEIQGNIANLSNSEKQKHVEKVYLENSDLVKRIQRVVTDHG
                     TEIGIRLKQPIDLQYGDILYADDHNMIIVDVNSEDLLVIQPRTLQEMGDIAHQLGNRH
                     LPAQFTETEMLVQYDYLVEDLLKSLGIPYVREDRKVNKAFRHIGHSHD"
     gene            3094..3783
                     /locus_tag="O7798_002317"
     CDS             3094..3783
                     /locus_tag="O7798_002317"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501024.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="urease accessory protein UreF"
                     /protein_id="HDC2864517.1"
                     /translation="MIDHTHLRLFQFCDSQFPTGAFSHSFGLETYIQRNIIHDDHTFI
                     AWLKMFLQEQLTYSDGLAMRLVYDALENDDTQKVLHIDKLMFVQNLPKETRVGAKQMG
                     TRMVKLALELYNSPWIAWYHQQMQDKKAKLNPAICFTMLGHHLGVDIETIIDYYLYQN
                     VSSLTQNAVRAIPLGQTAGQKIVTHMIPYIEGTRKQIFELKEADFGMTAPGLELNQMA
                     HENVNVRIFIS"
     gene            3796..4410
                     /gene="ureG"
                     /locus_tag="O7798_002318"
     CDS             3796..4410
                     /gene="ureG"
                     /locus_tag="O7798_002318"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501025.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="urease accessory protein UreG"
                     /protein_id="HDC2864518.1"
                     /translation="MANPIKIGIGGPVGAGKTQLIEKVVKRLSKEMSIGVITNDIYTK
                     EDEKILVNSGVLPESRIIGVETGGCPHTAIREDASMNFAAIDELLERHDDIELIFIES
                     GGDNLAATFSPELVDFSIYIIDVAQGEKIPRKGGQGMIKSDFFVINKTDLAPYVGASL
                     EQMAEDTKVFRGKRPFTFTNLKTDEGLDEVIDWIERDTLLKGLS"
     gene            4410..5246
                     /locus_tag="O7798_002319"
     CDS             4410..5246
                     /locus_tag="O7798_002319"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501026.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="urease accessory protein UreD"
                     /protein_id="HDC2864519.1"
                     /translation="MDEQQWTGQLDLTVFFDGNRSVSRDIFFEKALKVIRPVYLNQST
                     IPTFYIVNVGGGYLDGDRYRMNVNVEDNAKVTLTSQGATKIYKTPSNHVEQYQTFNLK
                     DNAYLEYVADPIIAYENAKFYQHNTFNLNNSSSLFYTDILTPGYSKTGEAFKYQYMHL
                     INEIYIEDELVTYDNLLLNPNKQSINEIGYMEHYSHYGSAYFIHEDVNQKLIDSVYET
                     ISSYSNTFDCRVAISQLPTRGFAVRIFAYRTQIIEKILGTIQSYIAENIYDRKLDFLR
                     KY"
BASE COUNT         1840 a          837 c         1017 g         1643 t
ORIGIN      
        1 ttaaaaacta tcttggtttt tacataaata tattccacta tttgttttcg attagattgt
       61 ttgtttcaat atcggatatg ctaaaaatat aattttctaa ttacacattg aactttgtat
      121 attacttgtt tatcacaaca attaggatta atataaattt tgtaaattgt atctaatatg
      181 aaattggggg ttttaatttg cattttacac aacgagagca agacaaatta atgattgtag
      241 tggcggcgga agttgcacgt cgtcgtaaag cacgtggttt gaaactaaat catcctgagg
      301 cattagcttt aatcagcgat gaattattag aaggtgcacg cgatggtaag accgttgcag
      361 agttaatgag ttatggtaga caaattctaa acaaagaaga tgtcatggat ggtgtcgaac
      421 acatgattac agatatcgaa atcgaggcta cgttccccga tggtactaag ttaatcacag
      481 tacatcaccc tattgtttaa aggaggcagt caaatgatac caggagaaat tattacaaaa
      541 agtacagagg ttgaaattaa taaccatcat cctgaaacag ttatcgaagt tgaaaataca
      601 ggagatcgac caattcaagt gggctcacat tttcattttt atgaagcaaa tgcagcatta
      661 gatttcgaac gtgaaatggc atatggaaaa catttagata ttccagctgg agcagctgtt
      721 cgatttgaac ctggggataa aaaagaagtt caattagttg aatatgctgg caaacgtaaa
      781 atttttggtt ttcgtggtat ggtcaatggt cctatcgatg agtcacgtgt ctatcgccca
      841 actgatgaaa atgatgaata tgcaggtgta ttcggagata acggtgctga aaacgtgaat
      901 aaaaaaggag gaaaaagatc atgagcttta aaatgacgca aaatcaatat acgagcttat
      961 acggtccaac tgttggagat tccattcgtt taggtgatac gaatctattt gctcaaatag
     1021 aaaaagacta tgcggtttat ggtgaagaag ctacttttgg tggtggtaaa tctattagag
     1081 acggtatggc gcaaaatcct cgtgtaacac gtgatgacgt gaacgttgca gaccttgtca
     1141 tttctaatgc cgttattatc gattacgata aagtggttaa agctgatata ggcattaaaa
     1201 atggttatat tttcgccata ggtaatgccg gcaacccaga tataatggat aatgtcgaca
     1261 ttattatagg ttcaacaaca gatatcattg ccgctgaagg taaaatcgtc actgctggtg
     1321 gtattgatac tcatgttcat tttattaatc ctgaacaagc agaggtcgca ttagaaagtg
     1381 gtattacgac tcatattggt ggtggtactg gtgcttcaga aggttctaaa gcaacaactg
     1441 taactccagg tccatggcat attcatagaa tgttagaagc tgccgaaggt ttaccgatta
     1501 atgtcggttt tacaggtaaa ggacaagcaa caaatccaac tgcactcatt gaacaaatca
     1561 atgccggagc aattggatta aaagtacatg aagactgggg tgcaacacca tctgctttga
     1621 gtcatgcatt agatgttgct gatgaatttg atgttcaaat tgcattacat gcagatactt
     1681 taaatgaagc aggatttatg gaagacacaa tggctgctgt taaagaccgt gtacttcata
     1741 tgtaccatac tgaaggtgct ggtggcggtc atgcgcctga tttaattaaa tccgctgcat
     1801 tttcaaatat tttaccttca tctacaaatc caactttgcc ttatacacat aatactgtag
     1861 atgaacattt agatatggta atgattactc accatttaaa tgcggctatt cctgaagata
     1921 tcgcattcgc agattcacgt attcgtaaag aaacgattgc agcagaagat gttctgcaag
     1981 atatgggtgt attcagtatg attagttccg attcacaagc aatgggccgt gtaggtgaag
     2041 taattacacg aacatggcaa gtagcacatc gcatgaaaga acaacgtggt cctttagatg
     2101 gtgattttga acataatgat aataatcgca tcaaacgtta tatcgctaaa tatacaatta
     2161 acccagcaat tacacatggt atttctgaat atgtaggatc tatcgagccg ggcaaactag
     2221 ctgacattgt cttatgggac ccaattttct ttggggttaa acctgaatta gttgtaaagg
     2281 gcggattaat taactctgcc gtaaatggcg atgcaaatgg ttctatacct acatctgaac
     2341 cgatgaagta ccgtaaaatg tatggtcaat acggcggaaa ccttacaagt acgtcaatga
     2401 cattcgtgtc taaaactgct tatgaaaatg gtatcaatcg tgcattaaat ttaaaacgca
     2461 tggtgcgtcc agttaaaaat attagacaat tatctaaagc agatatgaaa aataacagtg
     2521 caacacctaa attagacgtt gatccacaaa catatgaagt atatgtagat ggagaaaaaa
     2581 ttacaagtaa tgcagcaact gagttaccat taactcaaag atacttctta ttctaggagg
     2641 aacatagaat gattgttgaa gaaatccaag gcaatattgc caatttgtca aattcagaaa
     2701 aacaaaagca cgtcgaaaaa gtataccttg aaaattcaga tcttgttaaa cgtattcaaa
     2761 gagtcgttac agaccatggc actgaaatag gcattcgttt aaaacaacct attgacttac
     2821 aatatggaga tattttatac gcagatgacc ataatatgat tattgtggat gttaattcag
     2881 aagatctttt agtgattcaa ccaagaacat tgcaagaaat gggagatata gcccatcaat
     2941 taggaaatcg tcatttgcca gcacaattta cagagactga aatgctagta caatatgatt
     3001 atttagttga agatttatta aaaagtttag gcatcccata tgttcgagaa gaccgtaaag
     3061 ttaataaggc tttcagacat atagggcatt ctcatgattg atcatacaca cttaagatta
     3121 tttcagttct gtgattcaca gtttccaaca ggtgctttca gtcattcatt tggtcttgaa
     3181 acatatattc aacgaaatat aattcatgac gatcatactt ttattgcttg gttaaaaatg
     3241 tttttacaag agcaacttac ctattctgat ggtttagcca tgcgtttagt ttatgatgca
     3301 ttggaaaatg atgatacaca aaaagtatta cacatagata aactgatgtt tgttcaaaac
     3361 ttacctaaag aaacacgtgt tggtgcaaaa caaatgggga ctcgcatggt taaattggct
     3421 ttagaacttt ataatagccc atggattgct tggtatcatc aacaaatgca agataagaaa
     3481 gcaaagttaa atccagctat ttgttttact atgctaggcc atcatttagg tgtagatatt
     3541 gaaacgatta ttgattacta tttatatcaa aatgtttcaa gtttaactca aaatgctgtt
     3601 cgtgctattc cacttggaca aactgctggt caaaagatag ttactcacat gattccttat
     3661 atagaaggaa caagaaagca gattttcgaa ttaaaagaag cagattttgg catgacagcg
     3721 cctggtttag aactaaatca aatggcgcat gagaacgtca atgttagaat tttcatatca
     3781 taggaggtta taattgtggc aaatccgatt aaaattggta ttggtggtcc tgtaggtgca
     3841 ggtaaaacac aattaattga aaaagttgta aaacgtcttt caaaagaaat gagtatcggc
     3901 gttattacaa atgatatata tacaaaagaa gacgaaaaga tattagtaaa ttcaggagtt
     3961 ctacctgaaa gtcgtatcat tggtgttgaa actggtggat gtcctcatac tgcgattcgt
     4021 gaagatgcat ctatgaactt tgcagcaata gacgaattat tagaacgtca tgacgatata
     4081 gaactaattt tcatagaatc tggtggcgat aacttagcag caacatttag tccagaactt
     4141 gttgactttt caatatatat tatcgatgtt gctcaaggtg aaaagattcc acgtaaaggt
     4201 ggtcaaggta tgattaagtc agatttcttt gtaattaaca aaactgattt agctccctat
     4261 gtaggtgcat cattagaaca aatggctgaa gatactaaag tatttcgtgg taaacgtcca
     4321 tttactttta ctaacttaaa aaccgacgaa ggtttggatg aagttatcga ttggattgaa
     4381 cgcgacactt tactcaaagg attatcataa tggatgaaca acaatggact gggcaacttg
     4441 atttaacagt gtttttcgat ggcaatcgat cagtatcaag agatattttc tttgaaaaag
     4501 cacttaaagt gatacgtcca gtttatctaa atcaatctac cattcctaca ttttatatag
     4561 taaatgtagg tggtggctat ttagatggag atcgttaccg tatgaatgtg aatgtcgaag
     4621 ataacgctaa agtgacattg acatctcaag gtgcaacaaa aatatacaag acaccttcca
     4681 atcatgttga gcagtatcaa acttttaatt tgaaagataa cgcatattta gaatatgtcg
     4741 ctgatccaat catcgcatat gaaaatgcta aattttatca acacaatacg ttcaatctca
     4801 ataattctag ttcattattt tatactgata ttttaactcc tggttattca aaaactggcg
     4861 aagccttcaa gtatcaatat atgcatttaa taaatgaaat ttatattgaa gatgagttag
     4921 tcacatatga taatttatta ttgaatccta ataaacaatc gatcaatgaa ataggttata
     4981 tggaacatta ctctcattat ggctctgctt acttcataca cgaagatgtt aaccaaaaac
     5041 taatcgattc agtttatgaa accattagtt cttatagcaa tacattcgat tgtcgtgttg
     5101 ctatttctca attgcctaca cgtggttttg cagttagaat ttttgcttat cgcacacaaa
     5161 ttatagagaa aatacttgga accatccaaa gctatatcgc agaaaatatt tatgatcgta
     5221 aacttgattt tctaagaaaa tattaaaata aaaagactag tgtaccttgt ttcaagctta
     5281 ataagctgaa ataaggtatg gctagtcttt aactttaatt aaagcatctt caatatt
//
LOCUS       DALPQQ010000141         5318 bp    DNA     linear   BCT 22-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus strain K18-6-464
            SAMD00233528-rid16434743.denovo.142, whole genome shotgun sequence.
ACCESSION   DALPQQ010000141 DALPQQ010000000
VERSION     DALPQQ010000141.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMD00233528
            Sequence Read Archive: DRR236061
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 5318)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5318)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001543423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001543423.1
            Genome Coverage       :: 77x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/22/2022 17:09:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,811
            CDSs (total)                      :: 2,743
            Genes (coding)                    :: 2,689
            CDSs (with protein)               :: 2,689
            Genes (RNA)                       :: 68
            rRNAs                             :: 2, 4, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 4, 2 (16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 54
            CDSs (without protein)            :: 54
            Pseudo Genes (ambiguous residues) :: 0 of 54
            Pseudo Genes (frameshifted)       :: 27 of 54
            Pseudo Genes (incomplete)         :: 27 of 54
            Pseudo Genes (internal stop)      :: 10 of 54
            Pseudo Genes (multiple problems)  :: 10 of 54
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5318
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMD00233528-rid16434743.denovo.142"
                     /strain="K18-6-464"
                     /db_xref="taxon:1280"
                     /geo_loc_name="Japan: Niigata"
     gene            complement(45..653)
                     /locus_tag="O7798_002320"
     CDS             complement(45..653)
                     /locus_tag="O7798_002320"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499283.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class IV"
                     /protein_id="HDC2864520.1"
                     /translation="MQLFETMKIDNGHIPRLTYHTNRIKCSSERLNFKFDEHAWRNEL
                     NDVTTKYHSGQYRLKIVLNAESKFETIVSPLPEKSSFTAKFQVLPKVVNPTFIKNKTT
                     ERKHLAHNHETDLILLTSEDGKVLEFDIGNIVIEEDGKWYTPSYKDDFLKGCMRDYLI
                     DSDKLVEKDFNKNELIYKYHNNEIRLFLINSLREVADVHLCL"
     gene            complement(653..1804)
                     /locus_tag="O7798_002321"
     CDS             complement(653..1804)
                     /locus_tag="O7798_002321"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499282.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anthranilate synthase component I family
                     protein"
                     /protein_id="HDC2864521.1"
                     /translation="MRIEYNYRYYLTENEYKQYHIQLKGFIKKYVATKLADVGEVIHF
                     AQAQQRQGRYVSLYLSYEAAKYFNHAMCTHSLAKDDIYAAAYSFEKAESINSTYEHQT
                     SYVSKYHFSFVESSEVMMTNIKRVQQAIVEGETYQVNYTARLTDNIYYPISTLYERLT
                     QFSNGNYTALLQTDEIQVASISPELFFQKGQFNNVDNVIISKPMKGTMPRGKTEAEDQ
                     QYYKTLQTSSKDRAENVMIVDLLRNDIGRISQSGSIKVYKLFFIEAYKTVFQMTSMVS
                     GTLKNNTDLTQILTSLFPCGSITGAPKLNTMKYIKQLESSPRGIYCGAIGLLLPTEDD
                     KMIFNIPIRTIEYKYGQAIYGVGAGITIDSKPKDEVNEFYAKTKILEML"
     gene            complement(1788..2381)
                     /locus_tag="O7798_002322"
     CDS             complement(1788..2381)
                     /locus_tag="O7798_002322"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499281.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminodeoxychorismate/anthranilate synthase
                     component II"
                     /protein_id="HDC2864522.1"
                     /translation="MILVIDNNDSFTYNLIDYIKTQTKLTVQVVGIDNLLIEDVINMK
                     PKAIVISPGPGNPDDYPILNEVLEQFYQRVPILGVCLGFQCIVSYFGGNIIHGYHPVH
                     GHTTQLRHTNEGIFQGLPQNFNVMRYHSLIADGATFPNCLKITAKNDEAIIMAFEHIR
                     FPVFGVQYHPESILSEYGYRQVELFLSKVGDYCENRI"
     gene            2732..3400
                     /gene="queC"
                     /locus_tag="O7798_002323"
     CDS             2732..3400
                     /gene="queC"
                     /locus_tag="O7798_002323"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499280.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="7-cyano-7-deazaguanine synthase QueC"
                     /protein_id="HDC2864523.1"
                     /translation="MESVLNNEKAIVVFSGGQDSTTCLFYAKKHFKEVELVTFNYGQR
                     HDTEIEVAKQIAQDQGMKHHVLDMSLLSQLTPNALTQHDMEITNNEDGIPNTFVPARN
                     LLFLSFAGALAYQIGAKHIITGVCETDFSGYPDCRDSFIKSMNVTLSLAMDKDFVIHT
                     PLMWLNKAETWKLSDELEVLDYIRTKTLTCYNGIIGDGCGECPACHLRQRGLNQYLES
                     KGAL"
     gene            3402..3821
                     /gene="queD"
                     /locus_tag="O7798_002324"
     CDS             3402..3821
                     /gene="queD"
                     /locus_tag="O7798_002324"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499279.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="6-carboxytetrahydropterin synthase QueD"
                     /protein_id="HDC2864524.1"
                     /translation="MLQQIYPSTTHPYQFELNKDFNFSAAHHIPCEEAGICQNVHGHT
                     YFVNLTIVGDKLDDTGFLVNFSHLKKMIHGKFDHQLLNNLPAFKNKIPSTEIVAETIY
                     QIVKENLASLEHQPKCIQVFVRETPTSYVVFRPKEQV"
     gene            3825..4538
                     /gene="queE"
                     /locus_tag="O7798_002325"
     CDS             3825..4538
                     /gene="queE"
                     /locus_tag="O7798_002325"
                     /EC_number="4.3.99.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499278.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="7-carboxy-7-deazaguanine synthase QueE"
                     /protein_id="HDC2864525.1"
                     /translation="MAKIPVLEIFGPTIQGEGRVIGRKTMFVRTAGCDYRCSWCDSAF
                     TWDGSAKGDIKLMTAEEIYDELKRIGGDLFNHVTISGGNPALIKGIQELVDLFQDKGI
                     FSALETQGSKFQPWMTQIDDLTISPKPPSSTMTPDLKKLDEVITQCVPSSLNLKVVVF
                     DDKDYDFAKMIHHRYPDIPFYLQVGNPYLSDSVDNHTEKLLERYEQLVDLVMQSNDMN
                     HVYVLPQLHTLLWSNKKGV"
     gene            4637..5221
                     /locus_tag="O7798_002326"
     CDS             4637..5221
                     /locus_tag="O7798_002326"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499277.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDC2864526.1"
                     /translation="MIVYILINIAIVVLITGFNLYRHQMQHLSLSAMLLSITINAFIN
                     TFIIDKYNFITLCTITMFIIWTILQFYIDKKLKPVYITDQKFIAIILTIVVSLTQRVT
                     DFSSTQSIYMSIPFLAPAIFIIGGIMLFISTFNSLDETAENNNKIKKLMIKGLIIINI
                     SFIVMMVLTPYWYLYLIVYLIFLLFLLWQKVYKF"
BASE COUNT         1777 a          884 c          804 g         1853 t
ORIGIN      
        1 aaatttgttt tcacatcatt ttctacttta ttatcatact aattttaaag gcaaaggtgg
       61 acatcggcaa cctctcgtaa actatttatc aaaaataaac gtatctcatt gttatgatat
      121 ttataaatca attcgttttt attaaagtct ttttcaacaa gtttgtcact atctattaaa
      181 taatcacgca tgcatccttt taagaaatca tctttataac ttggtgtgta ccattttcca
      241 tcctcttcaa tgacaatgtt gccaatatca aattcaagga ccttgccgtc ctctgaagtt
      301 agcaatatta aatctgtttc atgattgtgt gctaaatgct ttcgttctgt cgttttattt
      361 tttataaaag ttggattaac tactttgggc aacacttgaa attttgctgt aaaactactt
      421 ttctcaggta aaggtgacac tatcgtttca aatttgcttt cagcatttaa tacgatttta
      481 agtctatatt gaccactgtg atactttgtt gttacatcgt ttaattcatt tcgccatgca
      541 tgttcatcaa atttaaagtt taatcgctca gaagaacatt ttatgcgatt agtatgataa
      601 gtaagtctag ggatatgtcc attatcaatt ttcattgttt caaataattg cattataaca
      661 tctccaaaat cttggttttt gcgtaaaatt cattcacttc atcttttggc ttagaatcaa
      721 ttgtaatacc tgctccgact ccataaatcg cttgtccata tttatactca atagtgcgaa
      781 tcggaatatt aaaaatcatt ttatcatctt cagttggaag taatagtcca attgctccgc
      841 agtatatacc acgaggtgaa ctttctaatt gtttaatata tttcattgta ttcagtttcg
      901 gtgcacctgt aatcgaacca caaggaaata acgatgttaa aatttgagtt aagtctgtat
      961 tattttttaa agttccactt accatcgaag tcatttgaaa tacagtttta tatgcctcaa
     1021 taaaaaatag tttatacacc ttaattgagc cactctgtga tattctccct atatcgtttc
     1081 ttagtaaatc aacaatcatg acattttctg cacgatcttt cgaagaagtt tgcaatgttt
     1141 tataatactg ttgatcttca gcttccgttt tacctctagg cattgtccct ttcatcggtt
     1201 tgcttatgat aacgttatcg acattgttaa attgtccttt ttgaaaaaat aattctggtg
     1261 agatagacgc tacttggatt tcatcagttt gtaataacgc agtataatta ccattactaa
     1321 attgagttaa tcgttcatat aaagtactaa taggataata aatgttatcc gttaagcgcg
     1381 ccgtatagtt cacttgatac gtttcgcctt caacaattgc ttgttggaca cgtttaatat
     1441 tagtcatcat aacctcagaa gattcaacaa atgaaaaatg atactttgat acataagaag
     1501 tttgatgttc atatgttgaa tttatgcttt ccgctttttc aaaactataa gctgctgcat
     1561 aaatatcatc tttagctaat gaatgtgtac acatagcatg attaaaatac tttgccgctt
     1621 cgtaacttaa atataacgag acatatctac cttgtcgttg ctgcgcttgt gcaaagtgta
     1681 tcacttctcc cacatcagcc aacttagtag caacatactt ctttataaat ccctttaatt
     1741 gaatatggta ttgcttatat tcattttcag ttaaatagta gcgataatta tattctattc
     1801 tcacagtaat cacctacctt cgataaaaat aattcaactt gtcgataacc gtattcactc
     1861 aaaatagatt caggatgata ttgcacacca aaaaccggaa atctaatatg ctcaaatgcc
     1921 ataataatcg cttcatcgtt ttttgctgta atctttaagc aatttggaaa agtcgctccg
     1981 tcagcaatta atgaatgata acgcattaca ttgaaatttt gaggcagtcc ttgaaaaata
     2041 ccttcattgg tatggcgtaa ctgtgtagta tgtccgtgta caggatgata gccgtgaatg
     2101 atatttccac caaaataaga cacgatacat tgaaatccta aacatacacc tagtataggt
     2161 acacgctgat aaaattgttc taacacttca ttcaagatag gataatcatc cggattaccc
     2221 ggcccaggcg aaataacaat tgcttttggc ttcatattaa tgacgtcttc tatcagcaga
     2281 ttatcaatac caacaacttg aactgttagt ttcgtttgag tcttaatata gtctattaaa
     2341 ttatatgtaa atgaatcatt attatctatg actagaatca ttgtatactc cgttctaaat
     2401 gtgttttatt tttataatat gtattggatg tagctaaaac tttaaaagca ttgtcattat
     2461 cctgaccttg attttaacta atatatggta tattctattc atcgtacata aatgaatatc
     2521 agaggttcct agctgaaacc ctctataaaa aactagacat tgaaatttca aacattcgtt
     2581 ggtaaacctt taatatatat tataggagca acccatttct ttcgtctatc ttttatggag
     2641 ataggctttt tttattttat aaattaaaaa cgggcttatc aatgccatta acctctttat
     2701 taatattatt aatgatagga gcaattacaa aatggaaagt gtattaaata atgaaaaagc
     2761 catcgttgtc tttagtggtg gtcaagacag tacaacatgt ctcttttatg caaaaaaaca
     2821 tttcaaagaa gttgaactcg taacgtttaa ttatggccaa agacatgata ctgaaattga
     2881 agtcgcaaaa caaattgcac aagatcaagg aatgaaacat cacgttttag atatgtcatt
     2941 attatcacaa cttactccaa acgcattaac acaacatgat atggaaatta ctaataatga
     3001 agatggtata cctaatacat ttgttccagc tagaaattta cttttcttgt cgtttgcagg
     3061 cgctctagct tatcaaattg gggctaagca tattattaca ggcgtatgtg aaacagactt
     3121 ttcaggctac ccagactgtc gcgatagttt tataaaatca atgaacgtaa cattaagcct
     3181 agctatggac aaagattttg tcattcatac tcctttaatg tggttaaaca aagcagaaac
     3241 gtggaaatta agtgatgaac tcgaagtttt agattatatt cgtacaaaaa cattaacatg
     3301 ctataacggt atcattgggg atggctgtgg tgaatgtcca gcttgtcatt tacgtcaacg
     3361 tggactaaat caatatcttg aaagtaaagg agcgctttaa aatgttacaa caaatctatc
     3421 ctagtacaac gcatccatat caattcgaat taaataaaga ttttaatttt tcggctgcac
     3481 atcacattcc atgtgaagaa gcaggtattt gtcaaaatgt ccatggtcat acttactttg
     3541 ttaatttaac aattgtcggt gataaactag atgacactgg cttcttagtg aactttagcc
     3601 atttgaaaaa gatgatacac ggtaaatttg accatcaact gttaaataac ttacctgctt
     3661 ttaaaaacaa aatcccttca actgaaatcg tagcggaaac aatttatcaa attgttaaag
     3721 aaaatttggc atcgctcgaa caccaaccaa aatgtattca agtatttgta agagaaacac
     3781 caacaagtta tgtcgtattt agaccaaagg aacaggtgta actaatggct aaaattcctg
     3841 tactcgaaat attcggtcca accattcagg gtgaaggtcg agtaatcggt agaaaaacga
     3901 tgtttgtgag aacagctgga tgtgattatc gctgtagctg gtgtgattct gcatttactt
     3961 gggatggtag tgctaaaggc gatataaaac tcatgaccgc tgaagaaatt tatgatgaat
     4021 taaaacgaat tggtggcgat ttatttaacc acgttacaat ttctggtggt aacccagcat
     4081 taattaaagg tatccaagag ttagttgact tatttcaaga taaaggtatt ttcagcgcac
     4141 tggagacaca aggcagtaaa ttccaacctt ggatgacaca aattgatgat ttaacgatta
     4201 gtccaaaacc accaagttca actatgacac ctgatttaaa aaagttagat gaagtgatta
     4261 cacaatgcgt accttcatca ttaaacttaa aagtagttgt attcgacgat aaagattatg
     4321 attttgccaa aatgatacac caccgttatc cagatattcc cttctattta caagttggta
     4381 acccatattt atcagacagc gtagataatc ataccgaaaa gttgttagaa cgctacgagc
     4441 agttggtgga tttagttatg caaagtaatg atatgaatca cgtttatgtg ttaccacaac
     4501 ttcatacatt actttggagc aataaaaaag gtgtataaag gataacttat tttacttttt
     4561 gcaagtcata tctaatgaat aacaatatat taattgatat aatagttgat tgaagtataa
     4621 cgaacaggag tccatcatga ttgtatatat attaattaat attgctatcg tcgtacttat
     4681 aactggattc aatttatata ggcatcaaat gcaacattta tcattaagtg caatgttgtt
     4741 atctattacg ataaacgcct ttataaatac attcataatt gataaatata actttattac
     4801 tctgtgtact ataacgatgt ttatcatttg gacgatacta cagttttaca ttgataaaaa
     4861 attaaaacct gtatacatta cagaccaaaa atttattgct atcatattaa cgattgttgt
     4921 cagtttaacg caacgtgtta ccgacttttc aagtacacaa tcaatatata tgtctattcc
     4981 atttttagcc cctgccattt tcatcattgg tggtattatg ttgtttattt caacatttaa
     5041 tagcttagat gaaactgctg aaaataataa caaaataaag aaactaatga ttaaaggact
     5101 tatcattatt aacatttcat ttatcgttat gatggtttta acaccatatt ggtacttgta
     5161 tttaatcgtc tatcttattt tcttgttgtt tttattgtgg caaaaggttt ataaatttta
     5221 ataccaaaac tattaaacac ttctgatatt cttagttcaa aatatcagaa gtgttttata
     5281 gtgttatcta gttcagataa atatttcctt acttaaaa
//
LOCUS       DALPQQ010000142         5265 bp    DNA     linear   BCT 22-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus strain K18-6-464
            SAMD00233528-rid16434743.denovo.143, whole genome shotgun sequence.
ACCESSION   DALPQQ010000142 DALPQQ010000000
VERSION     DALPQQ010000142.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMD00233528
            Sequence Read Archive: DRR236061
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 5265)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5265)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001543423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001543423.1
            Genome Coverage       :: 77x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/22/2022 17:09:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,811
            CDSs (total)                      :: 2,743
            Genes (coding)                    :: 2,689
            CDSs (with protein)               :: 2,689
            Genes (RNA)                       :: 68
            rRNAs                             :: 2, 4, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 4, 2 (16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 54
            CDSs (without protein)            :: 54
            Pseudo Genes (ambiguous residues) :: 0 of 54
            Pseudo Genes (frameshifted)       :: 27 of 54
            Pseudo Genes (incomplete)         :: 27 of 54
            Pseudo Genes (internal stop)      :: 10 of 54
            Pseudo Genes (multiple problems)  :: 10 of 54
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5265
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMD00233528-rid16434743.denovo.143"
                     /strain="K18-6-464"
                     /db_xref="taxon:1280"
                     /geo_loc_name="Japan: Niigata"
     gene            101..1483
                     /locus_tag="O7798_002327"
     CDS             101..1483
                     /locus_tag="O7798_002327"
                     /EC_number="2.7.2.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499849.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate kinase"
                     /protein_id="HDC2864527.1"
                     /translation="MKVSKFGGSSVSNATQIKKVLNIVNSDPERKIVIVSAPGKRHDN
                     DIKTTDLLIRLYEKVINHLDYHDKKREIIQRYDDIVKELQMDESILRTIDVTLEHYIN
                     QLKNEPKRLLDALLSCGEDFNAQLIALYNNSQGIPTKYISPKEAGIFVTDVPQEAQIL
                     DSAYSEIKKLRDYDEKLIIPGFFGVSHEGYIVTFPRGGSDITGAIISSGVRATIYENF
                     TDVSGIYKANPNIIKDPELIEEITYREMRELSYAGFSVFHDEALQPLYKDRIPVVIKN
                     TNRPQDKGTFIVHDREINAKNVISGISCDKDFTVINIKKYLMNRQVGFTRKILGVLED
                     NNISFDHMPSGIDTISIVMRSKQIQNKETKVLNEIRQKCDVDELSIEHDLAILMIVGE
                     GMNKVIGTANKITHALAESKINLKMINQGASEISMMFGIHVDDAEKAVLSTYEFCYHG
                     VALKNLCDKN"
     gene            complement(1537..2112)
                     /locus_tag="O7798_002328"
     CDS             complement(1537..2112)
                     /locus_tag="O7798_002328"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499848.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDC2864528.1"
                     /translation="MNAKEQLVDNLMKTSSQLFKFHGEVAMQLFLNDEFKLPSIVEIC
                     VERKRLSDIVKVIPQSYALLYIDKQDQAIAKEDLSLSKIAKVYVQYDDTTIMSIFVYD
                     VVNDEWIFRLDPNIRIPKSNIYFHSLNWDVDYIKPEIVLMYDLMQHHQYHHYSNYKRV
                     IDALSYYQFFILKFVVGEQRIKDAIQRTINN"
     gene            2443..3297
                     /locus_tag="O7798_002329"
     CDS             2443..3297
                     /locus_tag="O7798_002329"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499847.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDC2864529.1"
                     /translation="MSFYVVLIIIIVALIGILVLNQRYSNSKIDTEVYARKQLIKKNK
                     ALSAENAELRSQMLSSNNDVGHHAYKNAKRELRKILDSYLENGKLKYYDIIVTSNLAT
                     KHPFFEYARSFDFIIVSDIGLINVDVKSWGEKTFYHFDVPDEHDTEISNSNIEKVVGH
                     YISQQYHDQFNSSRKSIYTFTETVQPNRVIYDFYDYDPYQLAANNAKALKDHIEQNFN
                     FKVQSTGVIYFSDGTVNIIQGSEERDKYVDTVSTKSSLRRIISEAIELSKHPLNKEQV
                     DQITAIFK"
     gene            complement(3440..3973)
                     /locus_tag="O7798_002330"
     CDS             complement(3440..3973)
                     /locus_tag="O7798_002330"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499846.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thermonuclease family protein"
                     /protein_id="HDC2864530.1"
                     /translation="MKSNKSLAMIVVAIIIVGVLAFQFMNHTGPFKKGTNHETVQDLN
                     GKDKVHVQRVVDGDTFIANQNGKEIKVRLIGVDTPETVKPNTPVQPFGKEASNYSKKT
                     LTNQDVYLEYDKEKQDRYGRTLAYVWISKDRMYNKELVEKGLAREKYFSPNGKYRNVF
                     IEAQNKAKQQKLNIWSK"
     gene            4112..4300
                     /locus_tag="O7798_002331"
     CDS             4112..4300
                     /locus_tag="O7798_002331"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499845.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LapA family protein"
                     /protein_id="HDC2864531.1"
                     /translation="MNISNENTVTLIAVIIAIIIGIFLQIFFKLPLIVTAVLSILLGI
                     FVGFIVYLIVSFYNKRKN"
     gene            complement(4413..5015)
                     /locus_tag="O7798_002332"
     CDS             complement(4413..5015)
                     /locus_tag="O7798_002332"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499844.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HDC2864532.1"
                     /translation="MTSLIIAEDQNMLRQAMVQLIKLHGDFEILADTDNGLDAMKLIE
                     EYNPNVVILDIEMPGMTGLEVLAEIRKKHLNIKVIIVTTFKRPGYFEKAVVNDVDAYV
                     LKERSIEELVETINKVNNGEKEYSATLMTSFFVDKNPLTPKEQIVLREIGNGLSSKEI
                     SEKLFLTDGTVRNYTSVIIDKLFADNRFDAWKKANEKGWI"
     gene            complement(5012..>5265)
                     /locus_tag="O7798_002333"
     CDS             complement(5012..>5265)
                     /locus_tag="O7798_002333"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499843.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="sensor histidine kinase"
                     /protein_id="HDC2864533.1"
                     /translation="VMITREAINNVIKHANASKVHGKLKTVNNHKLLLMIEDDGKGID
                     SDCEVKSISQRVQHLNGTLAVDSTNGTKIIIEISTGGIA"
BASE COUNT         1824 a          827 c          737 g         1877 t
ORIGIN      
        1 ttgtaaagtt cgtaatattc aaaatataaa tacataatat cattcttact tacaaaactg
       61 aatacaattt tctgattttt tagaaaggtt ggcatgcact atgaaagttt ccaaattcgg
      121 tggtagctcc gtctccaatg ctactcaaat taaaaaggtt ttaaatattg ttaattctga
      181 tccagagcga aagattgtta tcgtttctgc tccaggtaaa agacatgata atgatattaa
      241 aacaactgat ttgttaatca gattatatga aaaggtcatt aatcatcttg attatcatga
      301 taaaaaaaga gaaattattc agcgttatga tgatattgta aaagaattgc aaatggatga
      361 aagtatttta cggacgatag atgtgacttt ggaacattat attaatcaat taaaaaatga
      421 accaaagaga ctattagatg cattactttc ttgtggtgaa gattttaatg cgcaattgat
      481 agctttatat aataatagtc aaggtatacc aacaaaatat atatcaccga aggaagcggg
      541 tatttttgtt actgacgtcc cacaagaagc acaaatatta gatagtgctt actctgaaat
      601 taaaaaatta agagattatg atgaaaaact aattatccca ggattttttg gcgtatctca
      661 tgaaggatat atagttacat ttccacgtgg cggatcagat ataactggcg ccatcatatc
      721 aagtggtgtt agagccacaa tttatgaaaa tttcaccgat gtgtctggta tttataaagc
      781 taatccaaat atcatcaaag atcctgaatt aatcgaagaa atcacttatc gagaaatgcg
      841 tgaattatct tatgctggtt ttagtgtttt ccatgatgaa gccttacaac cactttataa
      901 agatcgcatc cctgtggtga ttaaaaatac gaaccgccct caagataagg gtacatttat
      961 agtgcatgat agagaaataa atgcgaaaaa tgtgattagc ggtataagtt gtgataaaga
     1021 ttttaccgtt attaatatca aaaagtattt aatgaataga caagtcggct ttactagaaa
     1081 gatattaggt gtcttagagg ataataatat ttcatttgat catatgcctt caggtattga
     1141 tactatcagt atcgttatgc gttcaaaaca aattcaaaat aaagaaacaa aagtattaaa
     1201 tgaaattcgt caaaaatgtg atgttgatga gctaagtatt gagcatgatt tagcaatatt
     1261 aatgattgtc ggcgaaggta tgaataaagt catcggtact gcaaataaaa ttacacatgc
     1321 cttagctgaa tcaaaaatta acttaaaaat gattaaccaa ggtgcttcgg aaatctcgat
     1381 gatgtttgga attcatgtag atgatgctga aaaagctgta ttatctacat atgagttttg
     1441 ctatcacggg gttgcattaa aaaacttgtg tgataaaaac taatataaaa gcaattcgta
     1501 acacatgtat tcaactgcgt tatgaattgc tttttcttaa ttatttattg ttctctggat
     1561 tgcatcctta atacgttgct cacctactac aaattttaaa ataaaaaatt gatagtagct
     1621 taatgcatct atgactcgtt tataattgga ataatgatga tactgatggt gttgcattag
     1681 atcatacatt agaacgatct ccggtttaat ataatccaca tcccaattta aactatggaa
     1741 gtatatgtta ctcttaggta tacgtatatt cggatccaat ctaaaaatcc attcatcgtt
     1801 tactacatca taaacgaaaa tactcattat tgttgtatca tcatattgca cataaacttt
     1861 tgcaattttt gaaagtgata aatcttcttt agctattgct tgatcttgct tatctatgta
     1921 tagtaacgca tatgattgcg gaataacttt cacaatatca cttaaacgct tacgttccac
     1981 gcatatttca acaatagaag gtaatttaaa ttcatcattt aagaaaagct gcatggcaac
     2041 ttcaccgtga aatttaaata attgcgatga tgttttcatt aaattgtcca ctaattgttc
     2101 tttagcattc atttcattca ctctcaaata cacctcctaa gcaagcgctt tcacaaatat
     2161 cattatacat tttaaaatta atgaattcaa tcttcaaaat actatgagtg acctaattct
     2221 gtcatttaaa tgaccgttat aacataaatt cgacataaac ttgaattcac gaatctttca
     2281 cgtcatattc attgaacatc aatatctgtc agtttataat ttgattataa caatgatgaa
     2341 ctaaaatcaa ctaataaaaa tgtgggaaat tgaataacaa ttaatcttta ttaattatta
     2401 ttgtatacaa agttaaagaa gtcaaaaagg attggtgaaa aaatgtcttt ttatgttgta
     2461 cttatcatta tcattgtagc attaattggt atattagttt taaatcaaag gtatagtaat
     2521 agtaaaatag ataccgaagt ttatgcaaga aagcaactta ttaaaaagaa caaagcatta
     2581 agtgcagaaa atgctgaatt aagaagtcaa atgctgagtt ctaataatga tgttggccac
     2641 catgcataca aaaatgctaa aagagaatta cgcaagattt tagatagcta tctcgaaaat
     2701 ggtaaattaa aatattacga tattatcgtt acaagcaatt tagctactaa acatccgttt
     2761 ttcgagtatg cacgttcatt tgattttatc attgtttcag atatcggttt aataaacgtt
     2821 gatgtaaaaa gctggggtga aaaaacattt tatcactttg atgtacctga tgagcatgat
     2881 acagaaataa gcaatagtaa tattgaaaaa gttgtcggtc attacattag ccagcaatat
     2941 catgatcagt ttaattcatc aagaaagtct atctatactt ttacagaaac agttcaacca
     3001 aatcgtgtta tttatgattt ttatgattat gatccgtatc aattagcagc aaataatgcg
     3061 aaagcattaa aggatcatat tgaacaaaac tttaacttta aagtccaaag taccggtgtt
     3121 atttacttta gtgatggtac agttaatatc attcaaggtt ctgaagaaag agataaatat
     3181 gttgatacag tttcaacaaa atcttcgtta cgacgtatta ttagcgaagc catagagcta
     3241 tctaaacacc ctttaaataa agaacaggtt gatcaaatca cagctatatt caagtaaaat
     3301 caaaggcata ataatccatt acgctcgata cgcactatgg ttattatgcc tttaaattat
     3361 ttctatatat aaatttatgg taataataaa tcgatgcttc aagtatattt tactttaata
     3421 tatataatca cctatttaat tatttactcc aaatatttaa tttctgttgt ttagctttat
     3481 tttgtgcttc tataaataca tttctatatt tgccatttgg tgaaaaatac ttctctctag
     3541 caagtccctt ttccactaat tccttattgt acatacgatc tttacttatc catacatacg
     3601 ccaatgttct accatagcga tcttgttttt ctttatcata ttctaaataa acatcttgat
     3661 ttgttaatgt cttcttacta taatttgatg cttctttgcc aaatggttgt acaggcgtat
     3721 tcggtttcac cgtttctggc gtatcaaccc ctataagcct aactttaatt tctttaccat
     3781 tttgatttgc aataaatgta tcaccatcca caactctttg aacatgtact ttatctttac
     3841 catttaaatc ttgtacagtt tcatgattcg tccccttttt gaaaggaccc gtatgattca
     3901 taaattgaaa tgctaataca cctacaataa tgatggctac cacaatcata gcaagcgatt
     3961 tatttgactt catattgcca cctacttctc ttttttcatt ccgattaatc atataaaagt
     4021 taagaaatat cgtcaatagc catatctaca tatttcaata ttttggaaag ctatagcatg
     4081 atataatgtt attgttaagg agtgaaaata aatgaacatt tcaaatgaaa atacagtcac
     4141 attaattgca gtaattatcg caattatcat tggtattttc ctacaaatat ttttcaaatt
     4201 accattaata gtgacggcag tactatctat tttattgggt atctttgtag gctttatcgt
     4261 ttacttgatt gtttcgtttt ataataagcg aaaaaattag ttaacaaatc taaattgcga
     4321 gtaccaaaat aaaagtattg agtaagattt tgattattga ctcactttcc aagtctctta
     4381 aatcaaaaca ctcaatactt ttttgtttgt atttagatcc agcctttttc atttgccttt
     4441 ttccaagcat caaaacgatt atctgcaaat aatttatcaa ttataacaga tgtataattt
     4501 ctaactgttc catctgtcaa aaataatttt tcacttattt ctttactact taaaccattg
     4561 ccaatttccc ttaatacaat ttgttctttg ggcgttaatg ggtttttatc tacaaaaaat
     4621 gaagtcatca atgtggcgct atattctttc tctccgttat ttactttatt aatggtttcc
     4681 accaattctt ctatagaacg ttcttttaaa acatatgcat ccacatcatt cacaactgct
     4741 ttttcaaagt atcccggtct tttaaaagtt gttacaataa tcactttaat attcaaatgc
     4801 ttttttctaa tttccgctaa aacttcaagt ccagtcatgc ctggcatttc tatatctaaa
     4861 ataacaacgt taggattata ttcttcaata agtttcattg catcgagacc attatcagta
     4921 tctgctaaaa tttcaaaatc accatgtagt ttaattaatt gaaccattgc ctgtcgtaac
     4981 atattttgat cttctgcaat aattaaagat gtcatgctat tcctcctgtt gagatttcaa
     5041 tgattatttt agttccattt gttgagtcga ctgctaaagt tccatttaaa tgttgtacac
     5101 gctgtgaaat acttttcacc tcacaatcac tatcgatacc tttgccatca tcttcaatca
     5161 taagcagtaa tttatgattg tttacagttt ttaatttacc atgaactttt gaagcatttg
     5221 catgtttaat aacattattt atcgcttcac gcgtaatcat aacta
//
LOCUS       DALPQQ010000143         5185 bp    DNA     linear   BCT 22-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus strain K18-6-464
            SAMD00233528-rid16434743.denovo.144, whole genome shotgun sequence.
ACCESSION   DALPQQ010000143 DALPQQ010000000
VERSION     DALPQQ010000143.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMD00233528
            Sequence Read Archive: DRR236061
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 5185)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5185)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001543423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001543423.1
            Genome Coverage       :: 77x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/22/2022 17:09:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,811
            CDSs (total)                      :: 2,743
            Genes (coding)                    :: 2,689
            CDSs (with protein)               :: 2,689
            Genes (RNA)                       :: 68
            rRNAs                             :: 2, 4, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 4, 2 (16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 54
            CDSs (without protein)            :: 54
            Pseudo Genes (ambiguous residues) :: 0 of 54
            Pseudo Genes (frameshifted)       :: 27 of 54
            Pseudo Genes (incomplete)         :: 27 of 54
            Pseudo Genes (internal stop)      :: 10 of 54
            Pseudo Genes (multiple problems)  :: 10 of 54
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5185
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMD00233528-rid16434743.denovo.144"
                     /strain="K18-6-464"
                     /db_xref="taxon:1280"
                     /geo_loc_name="Japan: Niigata"
     gene            complement(59..826)
                     /locus_tag="O7798_002334"
     CDS             complement(59..826)
                     /locus_tag="O7798_002334"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501447.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine-protein phosphatase"
                     /protein_id="HDC2864534.1"
                     /translation="MIDIHNHILVDIDDGPKTIEKSIALLKQAKDEGVTSIVATPHHL
                     HPRYDNTFQQVLVKLAELRTHPEVQALDIKLFPGQEIRITDSILKGLDNGSIQGINRS
                     KYLLIEFPTGEVPHYTKQLFFEIQSRGYIPIIAHPERNRSIAKNPEILYELVANGALS
                     QLTSSSLVGGFGKNIQKLSLQFIECNLAHFVASDAHSCDQRPFLMQELFHNHKLKKYS
                     NDIEALLRNASSVINDNFVYLDRPTKPGKVKSFLKWF"
     gene            complement(823..1515)
                     /locus_tag="O7798_002335"
     CDS             complement(823..1515)
                     /locus_tag="O7798_002335"
                     /EC_number="2.7.10.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501448.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polysaccharide biosynthesis tyrosine autokinase"
                     /protein_id="HDC2864535.1"
                     /translation="MTNTRRSTSSLIVHEQPKSPISEKFRGIRSNIMFANPDSAVQSI
                     VITSEAPGAGKSTIAANLAVAYAQAGYKTLIVDGDMRKPTQHYIFNLPNNEGLSSLLL
                     NWSTYQDSIISTEIQDLDVLTSGPIPPNPSELITSRAFANLYDTLLMNYNFVIIDTPP
                     VNTVTDAQLFSKFTGNVVYVVNSENNNRDEVKKGKELIEATGAKLLGVVLNRMPKDKS
                     ASYYAYYGTDES"
     gene            complement(1532..2194)
                     /locus_tag="O7798_002336"
     CDS             complement(1532..2194)
                     /locus_tag="O7798_002336"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501449.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="capsular polysaccharide biosynthesis protein
                     CapA"
                     /protein_id="HDC2864536.1"
                     /translation="MKEKFDLVKLLNILKKNIKLLLILPAICLVVSAALTFFVMPDKY
                     TASTQILVNMKKSSSDLAFQNVQSSLQSVNTYTEIIKSPRILDKVSREFDGQYSTAEL
                     NSFLKVTNQTNSQIITVSVTTGNKSESDKIVNKISKVFAHDMPKIMSVDNVTILSSAH
                     DNAVKVSPIVSVNLVISIIVGIVLAILIIFLKELLDKRIKTEEDVESQLGLPILGSIQ
                     KF"
     gene            complement(3043..3603)
                     /gene="icaR"
                     /locus_tag="O7798_002337"
     CDS             complement(3043..3603)
                     /gene="icaR"
                     /locus_tag="O7798_002337"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501450.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ica operon transcriptional regulator IcaR"
                     /protein_id="HDC2864537.1"
                     /translation="MKDKIIDNAITLFSEKGYDGTTLDDIAKSVNIKKASLYYHFDSK
                     KSIYEQSVKCCFDYLNNIIMMNQNKSNYSIDALYQFLFEFIFDIEERYIRMYVQLSNT
                     PEEFSGNIYGQIQDLNQSLSKEIAKFYDESKIKMTKEDFQNLILLFLESWYLKASFSQ
                     KFGAVEESKSQFKDEVYSLLNIFLKK"
     gene            3767..5005
                     /gene="pgaC"
                     /locus_tag="O7798_002338"
     CDS             3767..5005
                     /gene="pgaC"
                     /locus_tag="O7798_002338"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501451.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="poly-beta-1,6 N-acetyl-D-glucosamine synthase"
                     /protein_id="HDC2864538.1"
                     /translation="MQFFNFLLFYPVFMSIYWIVGSIYFYFTREIRYSLNKKPDINVD
                     ELEGITFLLACYNESETIEDTLSNVLALKYEKKEIIIINDGSSDNTAELIYKIKENND
                     FIFVDLQENRGKANALNQGIKQASYDYVMCLDADTIVDQDAPYYMIENFKHDPKLGAV
                     TGNPRIRNKSSILGKIQTIEYASLIGCIKRSQTLAGAVNTISGVFTLFKKSAVVDVGY
                     WDTDMITEDIAVSWKLHLRGYRIKYEPLAMCWMLVPETLGGLWKQRVRWAQGGHEVLL
                     RDFFSTMKTKRFPLYILMFEQIISILWVYIVLLYLGYLFITANFLDYTFMTYSFSIFL
                     LSSFTMTFINVIQFTVALFIDSRYEKKNMAGLIFVSWYPTVYWIINAAVVLVAFPKAL
                     KRKKGGYATWSSPDRGNTQR"
     gene            4969..>5185
                     /gene="icaD"
                     /locus_tag="O7798_002339"
     CDS             4969..>5185
                     /gene="icaD"
                     /locus_tag="O7798_002339"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501452.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="intracellular adhesion protein D"
                     /protein_id="HDC2864539.1"
                     /translation="MVKPRQREYPTLKSSLNIVRETALIAISCVFWIYCLVVLLVYIG
                     TIFEIHDESINTIRVALNIENTEILDIF"
BASE COUNT         1719 a          853 c          745 g         1868 t
ORIGIN      
        1 agcatactca aaaagactgg tacatgtata ccagtctaat tcgaaaaaat atatttagtt
       61 aaaaccattt caaaaacgac ttcacttttc ctggcttagt cggtctgtct aaataaacaa
      121 aattatcatt gattactgaa ctggcatttc gaagtaatgc ttcaatatca ttcgaatatt
      181 tcttcaattt atgattgtga aataattctt gcatcaaaaa tggtctttgg tcacatgaat
      241 gtgcatctga agctacaaaa tgagccaaat tacattctat aaattgtaat gataactttt
      301 gaatgttttt accaaatcca ccaactaaag aactcgatgt taattgactc agtgccccat
      361 ttgcaaccaa ttcatataat atttccggat ttttggcgat acttctattt ctttcaggat
      421 gtgcaatgat tggtatgtaa cctctcgatt gtatttcaaa aaacaattgt tttgtataat
      481 gtggtacttc gcccgttgga aattcaatta ataaatattt cgaacgatta ataccttgaa
      541 tactaccatt atctaagcct ttcagaatcg aatctgtaat tctaatttct tgcccgggaa
      601 ataatttaat atccaatgct tgaacttctg gatgcgttct taactccgcc aatttcacaa
      661 gcacttgttg aaatgtatta tcatatctcg gatgcaaatg atgaggtgtc gctacaatac
      721 ttgttacacc ttcatcctta gcttgcttta atagtgcaat actcttttca attgttttag
      781 gaccatcatc tatatcaact aatatatggt tatgaatatc aatcatgatt catcagtccc
      841 ataatatgca tagtaactag cacttttatc tttaggcatt ctatttaaga ctacacctaa
      901 taatttagca cctgttgctt caataagttc ttttcctttt ttaacttcat ctctattatt
      961 attttccgaa ttaactacgt agacaacatt gccggtaaac tttgaaaata attgcgcatc
     1021 tgtaactgtg ttcactggtg gcgtatcgat aattacaaag ttataattca tcaataatgt
     1081 gtcatacaaa tttgcaaatg cccttgatgt aattaactct gacggattcg gtgggattgg
     1141 cccagacgtc aagacgtcta aatcttgaat ttcagttgag ataatactgt cttgataagt
     1201 tgaccaattt agcaataaac ttgataggcc ttcattgttt ggcaaattaa aaatataatg
     1261 ctgcgtaggt ttacgcatat ccccgtctac gattagtgtt ttataacctg cttgcgcata
     1321 tgcaactgct aaatttgctg caattgtaga cttacctgcg cctggtgcct ctgaagtgat
     1381 tacaatgctt tgaactgcac tgtcaggatt tgcaaacata atatttgatc ttatgcctcg
     1441 aaatttctcg ctaataggtg actttggttg ttcatggaca attaaacttg atgtacttct
     1501 tcgtgtattc gtcatggtaa ttcctcgtaa attaaaattt ttgtattgaa cctaaaatag
     1561 gtaatcctag ttgcgattca acatcttctt ctgtcttaat acgcttatct aataattctt
     1621 ttaagaaaat aatcaatatt gctaaaacaa taccaacaat aatgctgata actaagttga
     1681 cagatactat tggagatact tttacagcat tatcatgtgc tgaggaaagt atcgtaacat
     1741 tatcaacact cataatttta ggcatgtcat gagcaaaaac tttagatatt ttattaacaa
     1801 ttttgtcaga ttcagattta ttcccagtgg taactgatac agtaataatt tgagagtttg
     1861 tttgattggt tacttttaaa aatgaattca actcagctgt tgaatactga ccatcaaatt
     1921 ctctagatac tttatctaga attctaggac ttttgataat ttccgtatat gtattaacag
     1981 actgcaaact actttgaaca ttttggaaag ctaaatcact tgaggacttt ttcatgttca
     2041 ctaatatttg agtagaagca gtatatttgt caggcataac aaaaaaggtt aatgccgcac
     2101 ttactacaag acatattgcc ggtaaaataa gcaataattt aatattcttc tttagaatat
     2161 ttaatagttt tactaaatca aacttttctt tcatggtttc ctccacataa tcaatcattg
     2221 tattcattat gtatgtttta taaatcggac aattatatct agtttaacga ccacaaaaca
     2281 tacacaacta cattttctct aattatttat ataaatattt tatcgtttaa aattatatca
     2341 tgattctcta ccgttatgta taacttattt atatttttgc acaagatata atattgtcca
     2401 actttaaata tccaaaccta ttaataataa aactagatac catcgtactc tatcatggct
     2461 ttcttataat cgagtagaag catcatcatt acttgattat ttgctcttta caacaccgag
     2521 cgtgcccgta ctaggtaatt caataccttg cgtaacccgt cactgtgagt tgggttaatg
     2581 ataataaagc ccacaccttt taaaaagatg tgggtaattt atataatttt tatttacatt
     2641 tttaacttat aaaaaaaagc gcctatgtca tgatttacca tcacataggc gcttatcaat
     2701 aaattattac ttattacttt ccatttcatc taatttatgc ggatttcctg taattagatg
     2761 acaacttatt cttttcaggg gaacattaca cttttataat atgttcaaag acaaacttaa
     2821 ccattcacaa atataaagaa taatattatc aaatcattga acaaatcgta ttttgcaaca
     2881 attgatattt atattaatgt attgcattta atttataaaa ttcatataca tcttaatatt
     2941 ctcaatatcg atttgtattg tcaactttat atagatttaa aaaaataatc tcatgtcttt
     3001 ttttacaaaa gtaagttaat tattacaaac tagtaacaaa aattatttct tcaaaaatat
     3061 atttagtagc gaatacactt catctttgaa ttgactttta ctttcttcca ctgctccaaa
     3121 tttttgcgaa aaggatgctt tcaaatacca actttcaaga aacagcaata ttaaattctg
     3181 aaagtcttct tttgtcatct ttatctttga ttcatcatag aattttgcta tctctttact
     3241 taatgattga tttaaatctt gtatttgtcc gtaaatattt ccagaaaatt cctcaggcgt
     3301 attagataat tgaacgtaca ttctaatata cctttcttcg atgtcgaaaa taaactcaaa
     3361 taagaattga tataaagcat caattgaata gttcgattta ttttgattca tcataataat
     3421 attattaagg taatcaaaac aacatttaac actttgttcg taaatacttt ttttcgagtc
     3481 aaaatggtaa tataaactcg ctttctttat atttacactt ttagctatat catcaagtgt
     3541 tgtaccgtca taccccttct ctgaaaataa ggttattgcg ttatcaataa tcttatcctt
     3601 caatttttat aaccccctac tgaaaattaa tcacactatg ttacaggaaa attaagttgc
     3661 aattacaaat atttccgttt aattataaca acaatctatt gcaaattaaa atactatcaa
     3721 ttaccatatg gcttacaacc taactaacga aaggtaggta aagaaattgc aattttttaa
     3781 ctttttgctt ttttatcctg tatttatgtc tatttactgg attgtcggtt caatttattt
     3841 ctattttacc agagaaatta gatattcatt gaacaagaag cctgacataa atgtggatga
     3901 attagaaggc attacatttt tacttgcctg ttataacgaa agtgaaacga ttgaagatac
     3961 gttgtctaat gttcttgcac tcaaatacga gaagaaagaa attattatca ttaatgatgg
     4021 aagttcagat aatacagcag aactcatcta taaaatcaaa gaaaataatg actttatttt
     4081 cgtcgattta caagaaaaca gaggtaaagc caacgcactc aatcaaggca ttaaacaggc
     4141 ttcatatgat tatgtaatgt gcttggatgc agatactatc gttgatcaag atgcaccata
     4201 ttatatgatt gagaatttca aacatgatcc aaaacttggt gcagttacag gtaatcctag
     4261 aattcgaaat aagagttcta ttttaggtaa aattcaaacg atagaatatg caagtttaat
     4321 tggctgtatt aagcgaagtc agacacttgc tggcgcagtc aatactattt cgggtgtctt
     4381 cactctattt aaaaaaagtg cagttgtcga cgttggctac tgggatactg atatgattac
     4441 cgaagatatt gcagtttctt ggaaattgca tttacgtgga tatcgtatta agtatgaacc
     4501 gcttgccatg tgttggatgt tggttccaga aacattggga ggtctttgga agcaacgcgt
     4561 gagatgggct caagggggac acgaagtatt actacgagac ttttttagca caatgaaaac
     4621 gaaaaggttt cctttatata ttttgatgtt tgagcaaatc atctcgattt tatgggtata
     4681 tatagtgctt ctatatttag gctatttgtt cataacagca aacttcttag actatacatt
     4741 tatgacatat agtttttcaa tatttctact atcatcattt actatgactt ttataaacgt
     4801 tattcaattt acagtcgcac tctttattga tagtcgctac gagaaaaaga atatggctgg
     4861 actcatattt gtaagttggt atccgacagt atactggatt attaacgcag cagtagttct
     4921 tgtcgcattt ccaaaagcat taaaacgtaa gaaaggtggt tacgcaacat ggtcaagccc
     4981 agacagaggg aatacccaac gctaaaatca tcgctaaata ttgtaagaga aacagcactt
     5041 atcgctatat cttgtgtctt ttggatatat tgtttagttg ttctactcgt ttatattggt
     5101 actatatttg aaattcatga cgaaagtatc aatacaatac gtgttgcttt aaacattgaa
     5161 aatactgaaa ttttagatat atttg
//
LOCUS       DALPQQ010000144         5130 bp    DNA     linear   BCT 22-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus strain K18-6-464
            SAMD00233528-rid16434743.denovo.145, whole genome shotgun sequence.
ACCESSION   DALPQQ010000144 DALPQQ010000000
VERSION     DALPQQ010000144.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMD00233528
            Sequence Read Archive: DRR236061
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 5130)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5130)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001543423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001543423.1
            Genome Coverage       :: 77x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/22/2022 17:09:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,811
            CDSs (total)                      :: 2,743
            Genes (coding)                    :: 2,689
            CDSs (with protein)               :: 2,689
            Genes (RNA)                       :: 68
            rRNAs                             :: 2, 4, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 4, 2 (16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 54
            CDSs (without protein)            :: 54
            Pseudo Genes (ambiguous residues) :: 0 of 54
            Pseudo Genes (frameshifted)       :: 27 of 54
            Pseudo Genes (incomplete)         :: 27 of 54
            Pseudo Genes (internal stop)      :: 10 of 54
            Pseudo Genes (multiple problems)  :: 10 of 54
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5130
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMD00233528-rid16434743.denovo.145"
                     /strain="K18-6-464"
                     /db_xref="taxon:1280"
                     /geo_loc_name="Japan: Niigata"
     gene            255..3707
                     /locus_tag="O7798_002340"
     CDS             255..3707
                     /locus_tag="O7798_002340"
                     /EC_number="6.4.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499610.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyruvate carboxylase"
                     /protein_id="HDC2864540.1"
                     /translation="MKQIKKLLVANRGEIAIRIFRAAAELDISTVAIYSNEDKSSLHR
                     YKADESYLVGSDLGPAESYLNIERIIDVAKQANVDAIHPGYGFLSENEQFARRCAEEG
                     IKFIGPHLEHLDMFGDKVKARTTAIKADLPVIPGTDGPIKSYELAKEFAEEAGFPLMI
                     KATSGGGGKGMRIVREESELEDAFHRAKSEAEKSFGNSEVYIERYIDNPKHIEVQVIG
                     DEHGNIVHLFERDCSVQRRHQKVVEVAPSVGLSSTLRQRICDAAIQLMENIKYVNAGT
                     VEFLVSGDEFFFIEVNPRVQVEHTITEMVTGIDIVKTQILVAAGADLFGEEINMPQQK
                     DITTLGYAIQCRITTEDPLNDFMPDTGTIIAYRSSGGFGVRLDAGDGFQGAEISPYYD
                     SLLVKLSTHAISFKQAEEKMVRSLREMRIRGVKTNIPFLINVMKNKKFTSGDYTTKFI
                     EETPELFDIQPSLDRGTKTLEYIGNVTINGFPNVEKRPKPDYELASIPTVSSSKIASF
                     SGTKQLLDEVGPKGVAEWVKKQDDVLLTDTTFRDAHQSLLATRVRTKDMINIASKTAD
                     VFKDGFSLEMWGGATFDVAYNFLKENPWERLERLRKAIPNVLFQMLLRASNAVGYKNY
                     PDNVIHKFVQESAKAGIDVFRIFDSLNWVDQMKVANEAVQEAGKISEGTICYTGDILN
                     PERSNIYTLEYYVKLAKELEREGFHILAIKDMAGLLKPKAAYELIGELKSAVDLPIHL
                     HTHDTSGNGLLTYKQAIDAGVDIIDTAVASMSGLTSQPSANSLYYALNGFPRHLRTDI
                     EGMESLSHYWSTVRTYYSDFESDIKSPNTEIYQHEMPGGQYSNLSQQAKSLGLGERFD
                     EVKDMYRRVNFLFGDIVKVTPSSKVVGDMALYMVQNDLDEQSVITDGYKLDFPESVVS
                     FFKGEIGQPVNGFNKDLQAVILKGQEALTARPGEYLEPVDFEKVRELLEEEQQGPVTE
                     QDIISYVLYPKVYEQYIQTRNQYGNLSLLDTPTFFFGMRNGETVEIEIDKGKRLIIKL
                     ETISEPDENGNRTIYYAMNGQARRIYIKDENVHTNANVKPKADKSNPSHIGAQMPGSV
                     TEVKVSVGETVKANQPLLITEAMKMETTIQAPFDGVIKQVTVNNGDTIATGDLLIEIE
                     KATD"
     gene            complement(3847..4758)
                     /locus_tag="O7798_002341"
     CDS             complement(3847..4758)
                     /locus_tag="O7798_002341"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000467197.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heme A synthase"
                     /protein_id="HDC2864541.1"
                     /translation="MFGKKNLKWLGVVATLMMTFVQLGGALVTKTGSADGCGSSWPLC
                     HGALIPEFFPIDTIIELSHRAVSALSLLMVLWLVITAWKHIGYIKEIKPLSIISVGFL
                     LLQALIGAAAVIWQQNDYVLALHFGISLISFSSVFLITLIIFSIDQKYEADELYIKKP
                     LRRLTWLMAIIIYCGVYTGALVRHADASLAYGGWPLPFHDLVPHSEQDWVQLTHRIMA
                     FIVFTIIMITYIHAVKNYPNNRTVHYGYTAAFILVILQVITGALSIMTNVNLIIALFH
                     ALFITYLFGMTTYFIMLMLRSVRSDKQ"
BASE COUNT         1833 a          777 c          956 g         1564 t
ORIGIN      
        1 tgatgttttg caattttatt tttaattttt tagagttgta gaaatcgaaa atgtttcaca
       61 acaaaaacgt gaactacctg ttgttgcata gtcatttttg aaattattat ttctgaagcg
      121 gaggttttaa ttgtctcaag aatgttaaat tttgaaaatt tgaaacataa ctatagcaaa
      181 acagagcgct ttaagataaa attttattat ctaattagtt agaaaattct aatagtttga
      241 ggagtgtatc gctattgaaa caaataaaaa agttacttgt tgctaaccgt ggagaaattg
      301 caattcgtat attcagagcg gcggcagaat tagacatcag cacagttgca atttattcga
      361 atgaagacaa aagttcatta catagatata aagcagatga atcctattta gttggaagtg
      421 atttaggtcc tgctgaaagt tatttaaata ttgagcgtat cattgatgta gcaaaacaag
      481 cgaatgtgga tgcgattcat cctggctatg gatttttaag tgaaaatgaa caatttgcgc
      541 gtcgttgtgc agaagaagga attaaattta ttggtcctca tttagaacat ttagatatgt
      601 ttggagataa agttaaagct cgtacaacgg ctatcaaggc agatttacca gttattcctg
      661 gtacagacgg tccaattaaa tcatatgaat tagcaaaaga atttgcagaa gaagctggtt
      721 tcccgctaat gattaaagcc acaagtggtg gcggcggtaa aggtatgaga atcgttcgtg
      781 aagaaagtga attagaagat gctttccata gagcaaaatc agaagctgaa aaatcatttg
      841 gtaatagtga agtttacata gaaagataca ttgataatcc aaagcatatt gaagtacaag
      901 tcataggtga cgaacatgga aatatcgtac acttatttga acgtgattgt tcagtacaac
      961 gtcgtcatca aaaagttgta gaagttgcac catcagttgg attatcatca acattacgtc
     1021 aacgtatttg tgatgctgca attcaattga tggaaaatat taaatatgtc aatgcaggta
     1081 ctgttgaatt tctagtatct ggtgacgaat tcttctttat agaagttaac cctcgtgtac
     1141 aagtagagca tacaattaca gagatggtaa caggaattga tattgttaag acacaaattt
     1201 tagttgcagc aggtgccgat ttatttggtg aagagattaa tatgccgcaa caaaaagata
     1261 ttacaacatt aggctatgcc atccaatgtc gtattacaac agaagatccg ttaaatgatt
     1321 tcatgccgga tactggaaca atcattgctt atcgttcaag cgggggcttt ggtgtacgtc
     1381 ttgatgctgg agatggtttc caaggtgctg agatatcacc ttattatgat tcattactcg
     1441 taaaattatc tacacacgcg atatcattta aacaagcaga agaaaaaatg gtacgctcat
     1501 tacgagaaat gcgtattcgt ggtgttaaaa ctaatattcc attcttaatt aatgtaatga
     1561 agaataaaaa gttcacaagt ggtgattaca caactaaatt tattgaagaa acaccagaac
     1621 ttttcgacat tcagccgtct ctagatagag gtactaaaac attagaatat ataggtaatg
     1681 taacaattaa tggtttccca aatgttgaga aacgtccgaa accagactat gaattagcat
     1741 caattccaac tgtatcttca agtaaaatcg cttcatttag tggtacgaaa caattgcttg
     1801 atgaagtagg tccaaaaggt gtagctgaat gggttaaaaa gcaggatgat gtcttactaa
     1861 cagatacaac ctttagagat gcacaccaat cattattagc tacacgagtt agaactaagg
     1921 atatgattaa tatcgcatcc aaaacagcgg acgtatttaa agatggtttc tcactagaaa
     1981 tgtggggcgg tgctacattt gatgtggcat ataatttctt gaaggaaaac ccatgggaac
     2041 gacttgaacg tctacgtaaa gctattccaa atgtattatt ccaaatgttg ttacgtgctt
     2101 caaacgcagt tggttataaa aactatcctg ataatgttat tcataaattc gtacaagaaa
     2161 gtgctaaagc aggcatagat gtctttagaa ttttcgattc attaaactgg gtagatcaaa
     2221 tgaaagttgc caatgaagca gtacaagaag cgggcaaaat ctcagaaggt actatttgtt
     2281 atacaggtga cattttaaat cctgagcgat caaacattta tactttagag tattatgtca
     2341 aactagctaa agagttagaa cgtgaaggtt tccatatttt agcgattaaa gatatggcag
     2401 gcttattaaa acctaaagcc gcttacgaat tgattggtga gttaaaatca gctgtagatt
     2461 taccaattca tcttcacact catgatacaa gtggtaatgg tttattaaca tacaaacaag
     2521 caatagatgc tggtgtcgat atcattgata ctgctgttgc ttcaatgagt ggtttaacaa
     2581 gtcagccaag cgccaattcg ttatattatg cattaaatgg cttcccacgc caccttagaa
     2641 ctgatattga aggtatggag tcacttagtc attattggtc aactgtacgt acttattatt
     2701 cagactttga aagtgatatc aaatcaccga atactgaaat ttatcaacat gaaatgcctg
     2761 gtggacagta ttcgaattta agtcaacaag ctaaaagttt aggtttaggc gaaagatttg
     2821 atgaagtcaa agatatgtat cgcagagtga atttcttatt tggtgatatc gtaaaagtaa
     2881 caccatcgtc taaagtagtt ggtgatatgg cactttatat ggtacaaaat gatcttgatg
     2941 aacaatccgt gattacagat ggctataaat tagatttccc agaatcagta gtgtcgttct
     3001 tcaaaggtga aataggacaa cctgtaaatg gttttaataa agatttacaa gcggttattt
     3061 taaaaggcca agaagcacta acagctcgtc caggtgaata tctagagcca gttgattttg
     3121 aaaaagtccg tgagttgctt gaagaagagc aacaaggtcc tgttacggag caagatatta
     3181 ttagttatgt actatatcca aaagtatatg aacaatatat tcaaactaga aatcaatacg
     3241 gaaacttatc gttacttgat acgcctacat tcttctttgg aatgcgtaat ggtgaaacag
     3301 tagaaatcga aatcgataaa ggtaaacgat taattattaa actagaaacg attagtgaac
     3361 cagatgaaaa tggtaataga acgatttact atgcgatgaa tggtcaagcg agacgtattt
     3421 acattaaaga tgaaaatgtg catacaaatg cgaacgttaa gccaaaagca gataagagta
     3481 atccaagtca tatcggtgct caaatgccag gttcagtaac tgaagtcaag gttagtgtag
     3541 gtgaaactgt gaaagctaat cagccgttgc taattactga agctatgaaa atggaaacaa
     3601 caattcaagc accatttgac ggtgtgatta aacaagtaac tgtaaataat ggtgacacaa
     3661 tagcgacagg cgatttatta atcgaaattg aaaaagcaac tgactaaaat gattaaaata
     3721 aaacgagatt acacaacaat tgacgtgtaa tctcgttttt acatggctta ggtttaattt
     3781 taaatattga tataaaaaac cgtaatttta atgggcgtgc cattaaaatt acggtttgct
     3841 tttttgttat tgcttgtcac ttcttactga tcgtaacatt agcatgataa agtatgttgt
     3901 cataccaaat aaataagtga taaataatgc atggaaaagt gcgattatca ggttaacatt
     3961 tgtcataata gataatgcac ctgtgataac ttgtaatata acaagtataa atgcagctgt
     4021 ataaccataa tgaacagtac ggttatttgg ataattttta acagcgtgaa tataagtaat
     4081 cataataatc gtaaacacta taaaagccat gatacgatgc gtgagttgaa cccaatcttg
     4141 ttctgaatgt ggtacaagat cgtggaatgg caatggccaa ccaccatatg ctaaacttgc
     4201 atccgcatgt ctcactagtg caccagtata aacaccacaa taaatgatga ttgccattaa
     4261 ccatgttaaa cgtcttaatg gctttttgat atataattcg tcagcttcat atttttgatc
     4321 tatagagaaa ataatcaatg ttattaaaaa tacagatgag aaactgatta atgatatacc
     4381 aaagtgcaat gctaaaacgt aatcgttttg ttgccaaata acagcagcag ctccgattaa
     4441 tgcttgcaat aataagaatc caacactaat gattgataaa ggtttaattt ctttaatata
     4501 gcctatatgt ttccatgcag tgataactaa ccataagacc attaataaag acaaagctga
     4561 aacggctcta tgacttaact caataatcgt atcaatagga aagaattctg gaatcaacgc
     4621 accatgacat agtggccaag aagaaccaca accatcagct gatccggttt tggtaactaa
     4681 ggctccacca agttgtacaa atgtcatcat taacgttgct acgacaccta accattttaa
     4741 attctttttg ccaaacaatt tatacacccc atcataaaaa aacgcatcac tgagaattag
     4801 aattaatagc cggatttgag atgatactat aaatagacct gattgtagga tatgaaaaga
     4861 tgggatccaa cgcaggaaat atgatttaat tttacaagta ttgtatgtgg acgacataaa
     4921 aagaacttaa tcgtaatgat ttttttattg ggataattat gtaatccacg tttactcaaa
     4981 tttgaagctt aaatattaat ctcttttaga tgcatgattc tacttattaa aattttctaa
     5041 catatacatt atagcaataa attaaatgtt atttgtgtca caaaattgac attttctctt
     5101 gtcgttaatt tgtcacaatt taattttatt
//
LOCUS       DALPQQ010000145         5107 bp    DNA     linear   BCT 22-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus strain K18-6-464
            SAMD00233528-rid16434743.denovo.146, whole genome shotgun sequence.
ACCESSION   DALPQQ010000145 DALPQQ010000000
VERSION     DALPQQ010000145.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMD00233528
            Sequence Read Archive: DRR236061
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 5107)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5107)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001543423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001543423.1
            Genome Coverage       :: 77x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/22/2022 17:09:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,811
            CDSs (total)                      :: 2,743
            Genes (coding)                    :: 2,689
            CDSs (with protein)               :: 2,689
            Genes (RNA)                       :: 68
            rRNAs                             :: 2, 4, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 4, 2 (16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 54
            CDSs (without protein)            :: 54
            Pseudo Genes (ambiguous residues) :: 0 of 54
            Pseudo Genes (frameshifted)       :: 27 of 54
            Pseudo Genes (incomplete)         :: 27 of 54
            Pseudo Genes (internal stop)      :: 10 of 54
            Pseudo Genes (multiple problems)  :: 10 of 54
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5107
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMD00233528-rid16434743.denovo.146"
                     /strain="K18-6-464"
                     /db_xref="taxon:1280"
                     /geo_loc_name="Japan: Niigata"
     gene            53..1333
                     /locus_tag="O7798_002342"
     CDS             53..1333
                     /locus_tag="O7798_002342"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499850.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="homoserine dehydrogenase"
                     /protein_id="HDC2864542.1"
                     /translation="MKKLNIALLGLGTVGSGVVKIIEENRQQIQDTLNKDIVIKHILV
                     RDKSKKRPLNISQYHLTEDVNEILNDDSLDIIVEVMGGIEPTVDWLRTALKNKKHVIT
                     ANKDLLAVHLKLLEDLAEENGVALKFEASVAGGIPIVNAINNGLNANNISKFMGILNG
                     TSNFILSKMTKEQTTFEEALDEAKRLGFAEADPTDDVEGVDAARKVVITSYLSFNQVI
                     KLNDVKRRGISGVTLTDINVADQLGYKIKLIGKGIYENGKVNASVEPTLIDKKHQLAA
                     VEDEYNAIYVIGDAVGDTMFYGKGAGSLATGSAVVSDLLNVALFFESDLHTLPPHFEL
                     KTDKTREMMDSDAEINIKEKSNFFVVVNHVKGSIENFENELKAILPFHRSLRVANYDN
                     QSYAAVIVGLESSPEELITKHGYEVDKVYPVEGV"
     gene            1339..2400
                     /locus_tag="O7798_002343"
     CDS             1339..2400
                     /locus_tag="O7798_002343"
                     /EC_number="4.2.3.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499851.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="threonine synthase"
                     /protein_id="HDC2864543.1"
                     /translation="MRRWQGLVEEFKAHLPVNENTPKLTLNEGNTPLIHCENMSKILG
                     IDLYVKYEGANPTGSFKDRGMVMAVTKAKEQGKKIVICASTGNTSASAAAYAARAGLK
                     AIVVIPEGKIALGKLSQAVMYGAEIVSIEGNFDEALEIVKEIAKSGEIELVNSVNPFR
                     IEGQKTGSFEIVQQLDGEAPDILAIPVGNAGNITAYWKGFKEYHEAKGSQLPKMFGFQ
                     AEGASPIVQNKVIKNPETIATAIRIGNPASWDKATNALKESNGLIDSVTDDEILEAYQ
                     LMTTKEGVFSEPASNASIAGLIKLHRQGKLPQGKKVVAILTGNGLKDPDTAISLLDNP
                     IKPLPNDKDSIIDYIKGAL"
     gene            2402..3316
                     /locus_tag="O7798_002344"
     CDS             2402..3316
                     /locus_tag="O7798_002344"
                     /EC_number="2.7.1.39"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499852.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="homoserine kinase"
                     /protein_id="HDC2864544.1"
                     /translation="MSNVLELTIPASTANLGVGFDSIGMALDKFLHLSVKETSGTKWE
                     YIFHDDASKQLPTDETNFIYHVAQQVASKYSVDLPNLCIEMRSDIPLARGLGSSASAL
                     VGAIYIANYFGDIQLSKHEVLQLATEIEGHPDNVAPTIYGGLIAGYYNDVSKETSVAH
                     IDIPDVDVIVTIPTYELKTEASRRALPQKLTHSEAVKSSAISNTMICALAQHNYELAG
                     KLMQQDGFHEPYRQHLIAEFDEVKTIASQHNAYATVISGAGPTILIFSRKENSGELVR
                     SLNSQVVSCHSELVDINISGVKERIVYQ"
     gene            3374..4177
                     /locus_tag="O7798_002345"
     CDS             3374..4177
                     /locus_tag="O7798_002345"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499853.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Cof-type HAD-IIB family hydrolase"
                     /protein_id="HDC2864545.1"
                     /translation="MTNYKVVVLDMDDTLLNSDNVISEETANYLTAIQDEGYYVVLAS
                     GRPTEGMIPTARDLKLPEHHSYIISYNGSKTINMTNEEVEVSKSIGKQDFDEIVDYCR
                     DRGFFVLTYHDGQIIYDSEHEYMNIEAELTGLPMKRVDDIKAYIQGDVPKVMGVDYVA
                     NITEARIDLNGVFNDNVDATTSKPFFLEFMAKDVSKGNAIKALCHKLGYSVDQVIAFG
                     DSMNDKSMFEVAGLAIAMGNASDELKQYANEVTLDHNENGIPHALKKLL"
     gene            complement(4470..4784)
                     /locus_tag="O7798_002346"
     CDS             complement(4470..4784)
                     /locus_tag="O7798_002346"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499854.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDC2864546.1"
                     /translation="MIGQTNLFDDVLKQDERFVIVVQALEEKNGQLLKRTLREYPGLN
                     HKQMNDLFMHLKELFSEESFAENQSAFSITVYTNLDYTADQIYAHVKRFRGKHDWTQT
                     AK"
     gene            complement(4759..4863)
                     /locus_tag="O7798_002347"
     CDS             complement(4759..4863)
                     /locus_tag="O7798_002347"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499855.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDC2864547.1"
                     /translation="MLPFFILDILHIVYNIDNNNFSGVKFNDWTNKFI"
BASE COUNT         1845 a          690 c          979 g         1593 t
ORIGIN      
        1 tttttcaata atacatttgt ttttctcaaa agcacaaacg gaggtacata aaatgaaaaa
       61 attaaatata gcattattag gattaggtac tgtcggatct ggtgttgtta aaatcatcga
      121 agagaaccga cagcaaattc aagatacatt aaataaagat attgtcataa agcatattct
      181 tgttcgagat aaatctaaaa agagaccgct aaatattagc caatatcatt taactgaaga
      241 tgttaatgaa attttaaatg atgattcatt agatattatc gttgaagtca tgggaggaat
      301 tgaaccaact gtagattggt taagaacagc acttaaaaat aaaaaacatg ttattaccgc
      361 aaataaagat ttattagcag tacatcttaa acttttagaa gatttagcag aagaaaatgg
      421 tgtagcttta aagtttgaag cgagtgtagc aggtggtatt ccgatcgtaa atgccataaa
      481 taatggtttg aatgcgaata atatttcaaa atttatggga attttaaatg gtacctctaa
      541 ttttatttta tctaaaatga ctaaagagca aacgacattt gaggaagcac ttgatgaagc
      601 gaaaagactt ggttttgctg aagcggatcc aactgatgat gtagaagggg tagatgcagc
      661 gcgtaaagtt gtcattacat catatttatc atttaaccaa gtcattaaat taaacgacgt
      721 taaacgaaga ggaattagtg gcgtaacttt aactgatatt aatgtagccg atcaactggg
      781 gtataaaatt aaattgattg gtaagggaat atatgaaaat ggcaaagtta atgcatcggt
      841 agaaccaacg ttaattgata aaaagcatca attagcagct gtagaggatg aatataacgc
      901 gatttatgtt attggtgatg ccgttggtga cacgatgttt tatggaaaag gagcaggcag
      961 tttagcaaca ggtagtgccg ttgtcagtga tttattgaat gtagcattat tctttgaatc
     1021 agatttacac acattgccac cacattttga attaaagaca gataaaacac gggaaatgat
     1081 ggattcagat gcagaaatta atattaaaga aaaatccaat ttctttgtag tagtgaatca
     1141 tgtcaaaggt tcaattgaaa attttgaaaa tgagttaaag gcaatattac catttcaccg
     1201 atcattaaga gttgcaaatt acgataatca atcatatgcc gctgttatag ttggattgga
     1261 atcatcaccg gaagaattaa tcactaagca tggatacgaa gttgacaaag tatacccagt
     1321 agaaggagtt taattataat gagaagatgg caaggattag tagaagagtt taaagcacat
     1381 ttaccagtaa atgaaaatac accaaaatta acattgaacg agggaaatac accactcatt
     1441 cattgtgaaa atatgtctaa aatactaggc atagatttat atgtgaagta tgaaggtgcc
     1501 aatccgacag gttcatttaa agatcgcggt atggtaatgg ctgtgacaaa agcaaaagag
     1561 caaggtaaga aaattgtaat atgcgcttcg actggaaata catcagcgtc tgcagcagca
     1621 tatgcagcga gagcaggttt aaaagctatc gtcgtaatac cagaaggtaa aattgcatta
     1681 ggtaaattgt cgcaagcagt aatgtatggt gcagaaatcg tttctattga aggaaacttt
     1741 gatgaagctt tagaaattgt aaaagaaatt gcaaaaagtg gcgaaatcga gcttgtaaac
     1801 tctgtcaatc catttagaat cgaaggacaa aagacaggct catttgaaat tgtacaacaa
     1861 ttagacggtg aagcacctga tattttagcg attcctgtag gtaatgcagg taatattact
     1921 gcatattgga aaggctttaa agaatatcat gaagctaaag gatcacaatt gccgaaaatg
     1981 tttggcttcc aagctgaagg cgcatcacca attgttcaaa ataaagtcat taaaaatcct
     2041 gaaacgattg caactgctat tcgaattggt aatcctgcta gttgggataa ggcgactaat
     2101 gctcttaaag aatcaaatgg attaatagat agtgttactg atgatgaaat tctagaagca
     2161 tatcagttaa tgacaactaa agaaggtgtc tttagtgaac cagcgagtaa tgcttctatt
     2221 gcaggtttaa ttaaattgca tagacaaggt aaattacctc aaggtaaaaa agtagttgct
     2281 attttaactg gtaatggatt aaaagatcct gatactgcta tttcactact agataatccg
     2341 ataaagccat tgccaaatga taaagatagc attatcgatt atattaaagg agctttataa
     2401 catgtcgaat gttttggagt taacaattcc tgcatcaaca gccaaccttg gagttggctt
     2461 tgattctata ggtatggctt tagataaatt tttgcatctg tctgtaaagg aaacatcagg
     2521 gacaaaatgg gaatatattt tccatgatga tgcatctaag caattgccta ctgacgaaac
     2581 aaactttatt tatcatgtag cacaacaagt tgcttctaaa tatagtgttg acttgcctaa
     2641 tttatgtatc gaaatgagaa gtgatattcc attggcaaga gggttaggtt cgtcagcttc
     2701 tgctttagta ggagctatat atatcgcaaa ttattttggt gatatccaac tgtctaaaca
     2761 tgaggtatta caattagcga ctgaaatcga aggacatcct gataatgttg cgccgaccat
     2821 ttatggtggt ttaatcgctg gatattataa tgatgtctcg aaagaaacgt cagttgcaca
     2881 tatcgacata ccagacgtgg atgtgattgt aacgatacca acttatgaac taaaaacaga
     2941 agcatcaaga cgtgctttac cacaaaaatt aacacatagt gaagcggtta aaagtagtgc
     3001 aattagtaat acaatgattt gtgcattagc acagcacaat tatgaattag caggtaaact
     3061 catgcaacaa gatggctttc atgaaccgta tcgtcagcat ttaattgctg aatttgatga
     3121 agtgaaaaca attgctagtc aacataatgc ctatgcaact gtaattagtg gtgctggacc
     3181 aactatttta atatttagtc gtaaagaaaa tagtggggaa ttggttcgct ctttaaatag
     3241 tcaggtagta tcatgccatt ctgaattggt cgatattaat atcagtggtg ttaaagaacg
     3301 aattgtatac caatagacgc tttatattgt aaaatagtat taaatgcaga atagagagga
     3361 gatttaatgc gatatgacaa attataaagt tgtcgtttta gatatggatg acacattgct
     3421 aaattcagat aatgtgatat cagaagaaac tgcaaattat ttaacagcaa ttcaagatga
     3481 aggttattat gttgttctag catctggtag acctactgaa ggtatgattc caactgctag
     3541 agatttaaaa ttacctgaac atcatagcta tattattagt tataacggta gtaaaacgat
     3601 taacatgact aatgaagaag tagaagtaag taaatcgatt ggtaagcaag atttcgatga
     3661 aattgtagat tattgtcgag atagaggctt tttcgttctt acatatcatg atggtcaaat
     3721 tatttacgac agcgaacatg agtatatgaa tattgaagca gaattaacag gtttaccgat
     3781 gaaacgtgtt gatgatatca aagcgtatat tcaaggcgat gtacccaagg tcatgggtgt
     3841 agattatgta gcgaatatta cagaagctag aattgatttg aatggtgtgt tcaatgataa
     3901 tgtagatgct acgacaagta agccattctt cttagaattt atggccaaag acgtttcaaa
     3961 aggtaatgca attaaagcgt tatgtcacaa attgggatat tcggtggatc aagtcattgc
     4021 ttttggtgat agtatgaatg ataaatcaat gtttgaagtc gcaggtctag ctattgctat
     4081 ggggaatgca tcagatgaac ttaagcaata tgcaaatgaa gttacgttgg atcataatga
     4141 aaatggtatt ccacatgcgc tcaaaaaatt gttataaatt ttaaaataag ccttaacaca
     4201 tgatatttga ataagatatc ttgtggttaa ggctttttat ttttgtgaaa atgacttcag
     4261 ttatactatg gaggatttga aatacatatt ttagattagt aatgatatca aacgaataga
     4321 gtaaatgtat attttttgaa taaatcaagt attaactagt cacggaaggt agataaataa
     4381 atttgatcat tctgaataat aacgaatgca ttaaaaaatg cagtgacaat ctaacattaa
     4441 ttgttaaaat cactgcaagc atcttgattt tatttagctg tttgtgtcca gtcatgctta
     4501 cctctgaaac gttttacatg agcatatatt tggtcagcag tataatctaa atttgtataa
     4561 actgtaatac tgaacgctga ttggttttca gcaaatgatt cttcggaaaa taattccttt
     4621 aagtgcataa ataaatcatt catttgttta tggtttaaac cgggatattc ccttaaagtt
     4681 ctctttaata attgtccgtt cttttcttct aatgcttgaa ctacaataac aaatctttca
     4741 tcttgcttta gtacatcatc aaataaattt gtttgtccaa tcattgaatt tcacccctga
     4801 aaagttattg ttatctatat tatacacgat atgcaaaata tctaaaataa agaatggtaa
     4861 catggtaata ataaaatata aacagaatac tagttaatac actttatact agaaaaagat
     4921 attaaagtat atctgcttta caccattaaa aagcggcaaa tgctatagat aatctaaagc
     4981 atctgccgta tgagaattta tttatttttg attgtcataa tcgtgtggtt ttaaattaat
     5041 tgtttctagc tttacaaatt ttgttttgtg aatgatttta tgaataaagt aaatcaacgc
     5101 tagaatg
//
LOCUS       DALPQQ010000146         4969 bp    DNA     linear   BCT 22-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus strain K18-6-464
            SAMD00233528-rid16434743.denovo.147, whole genome shotgun sequence.
ACCESSION   DALPQQ010000146 DALPQQ010000000
VERSION     DALPQQ010000146.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMD00233528
            Sequence Read Archive: DRR236061
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 4969)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4969)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001543423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001543423.1
            Genome Coverage       :: 77x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/22/2022 17:09:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,811
            CDSs (total)                      :: 2,743
            Genes (coding)                    :: 2,689
            CDSs (with protein)               :: 2,689
            Genes (RNA)                       :: 68
            rRNAs                             :: 2, 4, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 4, 2 (16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 54
            CDSs (without protein)            :: 54
            Pseudo Genes (ambiguous residues) :: 0 of 54
            Pseudo Genes (frameshifted)       :: 27 of 54
            Pseudo Genes (incomplete)         :: 27 of 54
            Pseudo Genes (internal stop)      :: 10 of 54
            Pseudo Genes (multiple problems)  :: 10 of 54
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4969
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMD00233528-rid16434743.denovo.147"
                     /strain="K18-6-464"
                     /db_xref="taxon:1280"
                     /geo_loc_name="Japan: Niigata"
     gene            75..3227
                     /locus_tag="O7798_002348"
     CDS             75..3227
                     /locus_tag="O7798_002348"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498654.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA2/NAM7 family helicase"
                     /protein_id="HDC2864548.1"
                     /translation="MSQLLNDTLSAWLLIESLSPGEVNFTAEDILSAEHFKNGAKQAQ
                     LQSFDEYFEIWNAERFIISEEKSETGELIFKFYRHCFRYNEINLKIQDIFDDYSEIHN
                     PNGTHCYGYTFNTDKHGKVIVDSIHIPMIMSALKEIEKNKNANIEEKFNDSVEKFVQK
                     VKEILADEPINEFKLKKMDKAYDEYFSVLNSKKDGLFGHYVAIEYVKDSDLPQPEFNS
                     FFISDIEKARKSPNQTLIDYIEGVEESQRIEVDENKEMFDKFLHPSRLPDGRWPSQTE
                     FRLSLMQQLAVNQITSGNERISSVNGPPGTGKITLLKDIFAHLVVERGKELAKLNNPK
                     DAFVKTKIHETDDKYVYLLKESIAKYKMVVASSNNGAVENISKDLPKIEEIIRNPEKC
                     KFPKYEQNYANLAHELKDFAEIAEDLIGESAWGLFSGVFGKSTNINQVLSHMLKQDAN
                     DIGFAKLLQNENNRMSYNELMSEWQSHQRAFLEELRHVEMLKEESIRAYDVYKNCESF
                     SKIEQVINSEKTSIEEQVYHLDNETLRDNKEIEDLDNRINYIVKQIETLNELIKSIKE
                     SNKGFINKLKAMFNSEEDESYKDHNKEKQQLLTQQLELEKCKKNKHEDLVSKLKEKEK
                     LIKQLTKVQLQLDELNSQLQELEAYRIESKITIPEKDFWSDNNYDERQVTNLWTSDEL
                     QYRRAMLFLRAMILHKLLLIANNTTIYYAINDFKDRRKLIDANPDKVHNAWNVMHLIF
                     PVVSTTFASFKSMYGGIPKDFIDYLFIDEAGQAIPQAAVGALYRSKKVVAVGDPIQIE
                     PVVTLESHLIDNIRKNYHVPEYLVSKEASVQSVADNANQYGFWKSDATDSNQKTWIGI
                     PLWVHRRCLKPMFTIANQIAYNNKMVLPSNITKVGKTGWYDVKGNAVQKQFVKEHGEK
                     VVGLLADDWIEAIKEGKNEPSSFVISPFSAVQQQIKRMLKQQLPTRIDIERTKINQWV
                     DKSIGTVHTFQGKEAQKVYFVIGTDNTQDGAVNWSCEKPNLLNVAVTRAKKEFYVIGD
                     MQRIQMKPFYETIFKERNVK"
     gene            3284..3766
                     /locus_tag="O7798_002349"
     CDS             3284..3766
                     /locus_tag="O7798_002349"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498655.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDC2864549.1"
                     /translation="MEKFNNWILNAISGSQTDKNETTEELKGAKFIILYAYSMLVLLA
                     LVISNIFIHILEPKLSITTQIIIVLILIEALIGLRFLKAYDVKRGKDKENKKNSKDFV
                     KLKSILVAILFTSLALTAGTVADIYGFTDLGNTRSDLIVWSIGGIIFGLVCYTMEDKR
                     "
     gene            3971..4957
                     /locus_tag="O7798_002350"
     CDS             3971..4957
                     /locus_tag="O7798_002350"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498656.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphatidylinositol-specific phospholipase C"
                     /protein_id="HDC2864550.1"
                     /translation="MKKCIKTLFLSIILVVMSGWYHSAHASDSLSKSPENWMSKLDDG
                     KHLTEINIPGSHDSGSFTLKDPVKSVWAKTQDKDYLTQMKSGVRFFDIRGRASADNMI
                     SVHHGMVYLHHELGKFLDDAKYYLSAYPNETIVMSMKKDYDSDSKVTKTFEEIFREYY
                     YNNPQYQNLFYTGSNANPTLKETKGKIVLFNRMGGTYIKSGYGADTSGIQWADNATFE
                     TKINNGSLNLKVQDEYKDYYDKKVEAVKNLLAKAKTDSNKDNVYVNFLSVASGGSAFN
                     STYNYASHINPEIAKTIKANGKARTGWLIVDYAGYTWPGYDDIVSEIIDSNK"
BASE COUNT         1933 a          614 c          933 g         1489 t
ORIGIN      
        1 aaacactaat atgattaaat tatttgttaa aatagcatta agtaaaaaac aaatagggaa
       61 caaggtggga tttcatgagt caattgctaa atgatacgtt atcggcttgg ttgttaattg
      121 aatctttaag tccaggagaa gtaaatttta cagcggaaga tatactctca gctgaacatt
      181 ttaaaaatgg tgcaaagcaa gcacaacttc aaagttttga tgaatatttt gaaatatgga
      241 atgctgaacg ctttattata tcagaagaaa aatcagagac tggggaactt atatttaaat
      301 tttatagaca ttgcttccgc tataatgaaa ttaatttgaa aattcaggat atttttgatg
      361 attattctga gattcataat ccaaatggga cacactgtta tggttacaca tttaacacag
      421 ataaacacgg caaagtgata gttgattcta tacatattcc gatgattatg agtgcattaa
      481 aagaaattga aaagaacaaa aatgccaata tagaagaaaa atttaatgat tctgttgaaa
      541 aatttgttca aaaagtaaaa gaaattttag cagatgaacc aattaatgaa tttaaattga
      601 agaagatgga caaagcttat gatgagtact tttctgtatt aaattcaaag aaagatggat
      661 tatttggaca ttatgtagca atagaatatg tgaaagatag tgatttacca cagccggaat
      721 ttaacagctt cttcataagt gatattgaga aagcaagaaa atctcccaac caaactttaa
      781 ttgattacat tgaaggtgta gaagaaagtc agcgcataga agtagatgaa aataaagaaa
      841 tgtttgacaa atttttacat ccttcacgtt tgcctgatgg acgatggcca tcacagactg
      901 agtttagatt gtctttaatg caacaacttg ctgtaaacca aattacgagt ggtaatgaaa
      961 gaataagttc agttaatggg ccaccaggta caggtaagat tactttatta aaagatatat
     1021 ttgctcatct agtagttgaa agaggtaaag agttagctaa actaaataat cctaaagatg
     1081 catttgtcaa aacaaaaatt catgaaacgg atgataaata cgtatactta ctaaaggaat
     1141 ctattgccaa atataagatg gtagtcgcat ctagtaataa tggagctgtt gaaaatatat
     1201 ctaaagattt accgaaaatt gaagaaatta taagaaatcc cgaaaaatgt aaattcccta
     1261 aatatgaaca gaattatgca aatttagcac atgaattaaa agattttgct gaaatagctg
     1321 aagatttgat tggtgaaagt gcctggggct tattttctgg agtttttggt aaaagtacta
     1381 atattaacca agtattgagt catatgttaa aacaagatgc gaatgatatt ggctttgcta
     1441 aattactaca aaatgagaat aatcgtatga gttataacga gttaatgagt gaatggcaat
     1501 cacatcaacg tgcattttta gaagagttga ggcatgttga aatgttaaaa gaagaatcta
     1561 ttagagcata tgatgtttat aaaaattgtg agtctttctc taagattgaa caggttatta
     1621 atagtgaaaa aacaagtatt gaagaacagg tatatcattt agataatgaa acgttacgag
     1681 acaataaaga aatagaagat ttggataatc gaattaatta tattgttaag caaatagaaa
     1741 ctttaaatga gttaattaaa tccatcaaag aaagcaacaa aggttttatt aacaaactga
     1801 aagcgatgtt taattcagaa gaagatgaaa gctataaaga tcataataaa gagaagcaac
     1861 aattattaac acaacagtta gagttagaga aatgtaaaaa aaacaaacat gaagaccttg
     1921 ttagcaaact aaaagaaaaa gagaaattaa ttaaacaatt aactaaagta cagttgcaat
     1981 tagacgagtt aaattcacag ttacaagagt tagaagcata tcgtattgag tcaaaaatta
     2041 caattccaga aaaagatttt tggagtgaca acaattatga tgagcgccaa gttactaatc
     2101 tgtggacgag tgacgaactt caatacagac gtgccatgct ctttttaaga gcaatgatat
     2161 tgcataaatt attattgatt gctaataata caactattta ttatgcgatt aatgatttta
     2221 aagatagaag gaaattaatt gatgcaaatc cagataaagt acacaacgca tggaatgtga
     2281 tgcatttaat atttccagta gttagtacga cgtttgcaag ctttaaatct atgtatgggg
     2341 gcataccaaa agatttcata gactacttat ttattgatga agcaggacaa gcaatacctc
     2401 aagcagctgt gggagcatta tatcgttcaa aaaaagttgt agctgtaggt gatccgattc
     2461 aaatagaacc ggttgtgact ttagaaagtc atttaattga taacattcgt aaaaattatc
     2521 atgttccgga atatctagtt tctaaagaag cttctgtgca gtctgttgca gacaacgcca
     2581 atcaatatgg tttttggaaa tctgatgcta ctgatagtaa tcaaaaaacc tggataggca
     2641 tacctttatg ggtgcacaga cgatgtttaa aacctatgtt cacgatagct aaccaaatcg
     2701 cttataataa taaaatggtg ttgccaagta atattacaaa agtaggtaaa acaggttggt
     2761 atgacgttaa aggaaacgca gttcaaaaac aatttgtgaa agagcatggt gaaaaagtag
     2821 tgggattatt agctgatgat tggattgaag caattaagga aggtaaaaat gaaccgagct
     2881 catttgtaat atcgcctttt tcagcagtac agcaacagat taaacgtatg ttaaagcaac
     2941 aactaccgac tagaattgat attgaacgta caaaaattaa tcaatgggtc gataaatcca
     3001 ttggtactgt tcatactttt caaggtaaag aggctcagaa ggtgtatttt gtaataggta
     3061 ctgataatac ccaagatggt gctgtgaact ggtcatgcga aaaaccaaac ttgttaaacg
     3121 ttgcagtgac aagagctaag aaagagtttt atgtaattgg cgacatgcaa agaatacaga
     3181 tgaaaccatt ttatgagacg atttttaaag aaagaaatgt aaaataacat acaaaaaagt
     3241 atatagagga agttatacat tttaaaagga gcaaaattga ataatggaga aatttaacaa
     3301 ctggatatta aatgcaataa gtggatctca aacagacaag aatgaaacaa ctgaagaatt
     3361 aaaaggggca aaatttatca ttttatatgc atattcaatg ctcgttttgc ttgcgttagt
     3421 aatttctaac atattcattc acattttgga gcctaaacta tcaatcacca ctcaaatcat
     3481 catcgttttg attttaattg aagcactaat tggactgcgt ttcttgaaag cgtacgatgt
     3541 taagcgtggc aaagataaag aaaataagaa aaatagtaag gatttcgtta aactaaaatc
     3601 aattttagta gcaattttat ttacatcatt ggcgctgaca gcaggtactg tagctgatat
     3661 atacggtttc actgacttag gaaatactag aagtgattta atcgtttgga gcataggtgg
     3721 tattatattt ggcctcgtat gttacacaat ggaagataaa agataacgat aaggagctgg
     3781 cgattataaa gctagctcct tttttaactt atatatgtaa agaactatcc taagggtttt
     3841 taatcatatg tcaataattt ctataataca ttattaaaac atcaattaaa taagttttaa
     3901 aattttacac atatttttat ttaaaaaaga tgtataatta atgtattaaa tatagaaaga
     3961 agttgatatt atgaaaaagt gtattaagac tttgttttta agtatcattt tagtagtgat
     4021 gagtggttgg tatcattcag cacatgcgtc agattcgttg agtaaaagtc cagaaaattg
     4081 gatgagtaaa cttgatgatg gaaaacattt aactgagatt aatataccgg gttcacatga
     4141 tagtggctca ttcactttaa aggatccagt aaaatcagtt tgggcaaaga ctcaagataa
     4201 agattacctt acccaaatga agtcgggagt caggtttttt gatattagag gtagagcaag
     4261 tgctgataat atgatttcag ttcatcacgg catggtttat ttgcatcatg aattaggaaa
     4321 atttctcgat gatgctaaat attacttgag tgcttatcca aacgaaacaa ttgtgatgtc
     4381 tatgaaaaag gactacgata gcgattctaa agttacgaag acatttgaag aaatttttag
     4441 agaatattat tataataacc cgcaatatca gaatcttttt tacacaggaa gtaatgcgaa
     4501 tcctacttta aaagaaacga aaggtaaaat tgtcctattc aatagaatgg ggggtacgta
     4561 cataaaaagt ggttatggtg ctgacacgtc aggtattcaa tgggcagaca atgcgacatt
     4621 tgaaacgaaa attaataatg gtagcttaaa tttaaaagta caagatgagt ataaagatta
     4681 ctatgataaa aaagttgaag ctgttaaaaa tttattggct aaagctaaaa cggatagtaa
     4741 caaagacaat gtatatgtga atttcttgag tgtagcgtct ggaggcagcg catttaatag
     4801 tacttataac tatgcatcac atataaatcc tgaaattgca aaaacgatta aagcaaatgg
     4861 gaaagctaga acgggttggc tgattgttga ctatgcagga tatacgtggc ctggatatga
     4921 tgatatcgta agtgaaatta tagatagtaa taaataagga ttcaataat
//
LOCUS       DALPQQ010000147         4909 bp    DNA     linear   BCT 22-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus strain K18-6-464
            SAMD00233528-rid16434743.denovo.148, whole genome shotgun sequence.
ACCESSION   DALPQQ010000147 DALPQQ010000000
VERSION     DALPQQ010000147.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMD00233528
            Sequence Read Archive: DRR236061
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 4909)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4909)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001543423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001543423.1
            Genome Coverage       :: 77x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/22/2022 17:09:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,811
            CDSs (total)                      :: 2,743
            Genes (coding)                    :: 2,689
            CDSs (with protein)               :: 2,689
            Genes (RNA)                       :: 68
            rRNAs                             :: 2, 4, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 4, 2 (16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 54
            CDSs (without protein)            :: 54
            Pseudo Genes (ambiguous residues) :: 0 of 54
            Pseudo Genes (frameshifted)       :: 27 of 54
            Pseudo Genes (incomplete)         :: 27 of 54
            Pseudo Genes (internal stop)      :: 10 of 54
            Pseudo Genes (multiple problems)  :: 10 of 54
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4909
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMD00233528-rid16434743.denovo.148"
                     /strain="K18-6-464"
                     /db_xref="taxon:1280"
                     /geo_loc_name="Japan: Niigata"
     gene            complement(196..642)
                     /gene="perR"
                     /locus_tag="O7798_002351"
     CDS             complement(196..642)
                     /gene="perR"
                     /locus_tag="O7798_002351"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500494.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peroxide-responsive transcriptional repressor
                     PerR"
                     /protein_id="HDC2864551.1"
                     /translation="MSVEIESIEHELEESIASLRQAGVRITPQRQAILRYLISSHTHP
                     TADEIYQALSPDFPNISVATIYNNLRVFKDIGIVKELTYGDSSSRFDFNTHNHYHIIC
                     EQCGKIVDFQYPQLNEIERLAQHMTDFDVTHHRMEIYGVCKECQDK"
     gene            complement(739..1689)
                     /locus_tag="O7798_002352"
     CDS             complement(739..1689)
                     /locus_tag="O7798_002352"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500495.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoglycerate dehydrogenase"
                     /protein_id="HDC2864552.1"
                     /translation="MKVVGLNRMREVETELQQRFSDLDFKFYKKASEIPESDLADLDI
                     LVGYDGGINEAFLRRCPNLKWIAWFATGVNTLPLDYIADHGILLTNGKGVQAKQLSEY
                     ILAFILDDYKKMKLSYDNQRQHIYDSKITGKRLSGQTVLFLGTGAIATRTAKLAKAFN
                     MNLIGLSKSGQNKDEFDEIYTIESLESTLPNADIIINALPETQETIHLLKKKHFELMK
                     DEALFINIGRGSIVKEALLIEVLKSKVIRHAYLDVFENEPLKPNHELYELDNVTITAH
                     ITGNDYEAKYDLLDIFKNNLVNFLNKNGLIENEVDAKKGY"
     gene            complement(1695..2150)
                     /gene="bcp"
                     /locus_tag="O7798_002353"
     CDS             complement(1695..2150)
                     /gene="bcp"
                     /locus_tag="O7798_002353"
                     /EC_number="1.11.1.24"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500496.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin-dependent thiol peroxidase"
                     /protein_id="HDC2864553.1"
                     /translation="MLQKGEQFPIFKLENQDGTVITNDTLKGKKAIIYFYPRDNTPTC
                     TTEACDFRDNLEMFNDLDVAVYGISGDSKKKHQNFIEKHGLNFDLLVDEDFKLAKETG
                     VYQLKKSFGKESMGIVRTTFIIDEQGKVLDVIEKVKVKTQIEELKNILG"
     gene            2231..3520
                     /locus_tag="O7798_002354"
     CDS             2231..3520
                     /locus_tag="O7798_002354"
                     /EC_number="5.4.3.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500497.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate-1-semialdehyde 2,1-aminomutase"
                     /protein_id="HDC2864554.1"
                     /translation="MNFSESERLQQLSNEYILGGVNSPSRSYKAVGGGAPVVMKEGHG
                     AYLYDVDGNKFIDYLQAYGPIITGHAHPHITKAIQEQAAKGVLFGTPTELEIEFSKKL
                     RDAIPSLEKIRFVNSGTEAVMTTIRVARAYTKRNKIIKFAGSYHGHSDLVLVAAGSGP
                     SQLGSPDSAGVPESVAREVITVPFNDINAYKEAIEFWGDEIAAVLVEPIVGNFGMVMP
                     QPGFLEEVNEISHNNGTLVIYDEVITAFRFHYGAAQDLLGVIPDLTAFGKIVGGGLPI
                     GGYGGRQDIMEQVAPLGPAYQAGTMAGNPLSMKAGIALLEVLEQDGVYEKLDSLGQQL
                     EEGLLKLIEKHNITATINRIYGSLTLYFTDEKVTHYDQVEHSDGEAFGKFFKLMLNQG
                     INLAPSKFEAWFLTTEHTEEDIKQTLKAADYAFSQMK"
     gene            3813..4907
                     /locus_tag="O7798_002355"
     CDS             3813..4907
                     /locus_tag="O7798_002355"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014667727.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aromatic acid exporter family protein"
                     /protein_id="HDC2864555.1"
                     /translation="MRLGARIFKTGIAIILAMSIASLLPDDVGLKALAGVSAVVAMQP
                     SIYRSFKTVSDQALGNIIGAILSVTMVTIFSDNFIIMGVTVIVLIAILFKFNLAHVAT
                     LASVTALIIMGQHTGSFYITAFYRFVLVMIGVISSSLVNFVFLPPKFETKIYYNSLNI
                     SSDIFMWFKLVLNDTTEFNNIKQDSHNLKQRVEKLEKIYDYYSEERPITKKHIHQQNR
                     KKILFREVVQTTRQAYEVLNKLSRYQNDLYLLNNNFLLQIKLDLDSLTAFHEQILASL
                     SKKARYNVTHVDYELDNPQKKDLLSTFQHELINHPYQTEYSFANVMQIVAAIEEYRHH
                     LEHLDRIRISFFTYHRSDADIEIVEEDFDL"
BASE COUNT         1606 a          794 c          734 g         1775 t
ORIGIN      
        1 tatttataaa ggatactagt tattagttaa taccacttcc gtagttagaa tattcttttc
       61 ttcaatttaa atatttttca gaataagcat aaaaaaagtt aaacaacttt catgtcgttt
      121 aacttcttaa atattacgct tacttatatg aagtaagcta acgctttttt aatttgtcat
      181 actaccaaag ttaaattatt tatcttggca ttctttacaa actccataaa tttccattcg
      241 atgatgtgtt acgtcaaagt cagtcatatg ctgagctaat ctttcaattt catttaactg
      301 tggatattga aaatcaacaa tcttaccaca ttgttcacat ataatatgat aatgattatg
      361 tgtattaaag tcgaatcgac ttgatgagtc tccatatgtt aattctttta caattccaat
      421 atctttaaac actcttaagt tattatatat tgtcgcaaca cttatatttg gaaaatcagg
      481 tgaaagtgct tgataaattt catcagctgt tggatgagta tgtgaagaaa ttaaataacg
      541 taatattgct tgtctttgag gtgtaattct tacgcctgct tgtcgcaatg atgcaattga
      601 ttcttctagt tcatgttcaa ttgattctat ttcaacactc atctatatca ccatctttct
      661 tatataataa ttattattac ttactataaa tataactgta gtattgcgcg cgtgtcaata
      721 tttacatgat gatttcattt aatagccttt tttagcatca acttcattct caattagacc
      781 attcttattg agaaaattaa ctagattgtt tttaaaaata tctaataagt catactttgc
      841 ttcataatca ttaccagtta tatgcgctgt tatagttaca ttatccaatt catataattc
      901 atgattaggt ttcaaaggtt cattttcaaa cacatctaaa tatgcatgtc gaataacttt
      961 actttttaat acttctatta agagcgcttc tttaactatg ctacctcgtc ctatatttat
     1021 aaaaagtgct tcatctttca ttaattcaaa atgttttttc tttagtaaat gaatcgtttc
     1081 ttgcgtttct ggtaaagcat ttataataat gtcagcattt ggtaatgtgc tttcaagtga
     1141 ttcgatagta tatatctcgt caaactcatc tttgttctga cctgacttgc tcagaccaat
     1201 taaattcata ttaaaagcct ttgctaactt cgcagttcta gtagcaattg cacctgtacc
     1261 taaaaataaa actgtttgtc ctgataggcg tttaccagtt attttcgaat catatatatg
     1321 ttgtcgttgg ttatcatatg atagtttcat ctttttataa tcatctaaaa tgaaagctaa
     1381 aatgtattca gataattgtt tagcttgaac accttttcca ttagttaaaa gtatgccgtg
     1441 atctgcaata taatctaacg gcaatgtatt tacacccgtt gcaaaccatg caatccattt
     1501 taaattcggg caacgtcgta aaaatgcctc attgataccg ccatcataac caactaatat
     1561 atctaaatca gccaagtcgc tctcaggtat ttctgatgct tttttataaa atttaaaatc
     1621 taaatctgaa aagcgttgtt gtaattcagt ttcaacttca cgcatacgat ttaacccaac
     1681 aactttcata tatgtcaccc caaaatgttt ttaagttctt ctatttgtgt tttaacctta
     1741 accttctcga taacatctaa tactttacct tgttcatcta ttataaaagt cgttcttaca
     1801 atgcccatac tttctttgcc aaatgatttt tttaactgat atacgccagt ttctttagct
     1861 aatttaaaat cttcatctac taataaatcg aaattcaatc cgtgtttctc aataaaattt
     1921 tggtgttttt tctttgaatc accgcttata ccatatactg caacatctaa atcattgaac
     1981 atttctaaat tgtctctaaa gtcacaagct tctgtggtac aagtaggtgt attatctcta
     2041 ggataaaaat atataatcgc ctttttacct tttaatgtat catttgtaat gacagttccg
     2101 tcttgatttt ctaatttaaa tattggaaat tgttctcctt tttgcaacat ataatcacct
     2161 ttttcttcat tataataatt ttatgatacg atattagatg aaaatattaa attaaaagag
     2221 gttgatataa atgaatttta gtgaaagtga acgtttacaa caactttcaa acgaatatat
     2281 tctaggcggt gtcaattccc cttctcgttc ttataaagct gtaggaggcg gtgcacctgt
     2341 tgttatgaaa gaaggacacg gtgcatattt atatgatgtc gatggcaata aatttattga
     2401 ttaccttcaa gcatacggtc caattattac ggggcatgca catcctcata ttactaaagc
     2461 aattcaagaa caagctgcta aaggtgtttt atttggtaca ccgactgaat tagaaattga
     2521 attcagcaaa aaattacgtg atgcaattcc atctcttgag aaaattcgct ttgtaaattc
     2581 tggaacagaa gcagtcatga caacaattcg tgttgcacgt gcatatacta aaagaaataa
     2641 aattataaaa tttgctggat cttatcatgg ccattctgat ttagtattgg ttgcagcagg
     2701 tagcggccca tctcagctcg gttctccaga ctcagctggt gttccagaaa gcgtcgcacg
     2761 tgaagtcatt actgtacctt tcaatgatat taacgcctat aaagaagcaa ttgaattttg
     2821 gggtgatgaa attgccgcag tattagtaga accaattgtt ggtaactttg gaatggtaat
     2881 gcctcaacct ggatttttag aagaggttaa tgaaatttca cataacaatg ggaccctagt
     2941 gatttatgat gaagtaatta ctgcattccg tttccattac ggtgccgctc aagatttatt
     3001 aggtgttatc cctgatttaa ctgcatttgg taaaattgtt ggcggtggtt taccaattgg
     3061 aggctatggt ggacgtcaag atattatgga acaagtagca cctctaggac ctgcatatca
     3121 agctggtaca atggctggta acccgttatc tatgaaagca ggtattgcat tactcgaagt
     3181 actagaacaa gacggtgttt atgaaaaatt agacagctta ggccaacaac tagaagaagg
     3241 tttacttaaa ttaatcgaaa aacataatat cacagctaca attaatcgta tttatggatc
     3301 tttaacattg tactttacag atgaaaaagt cacacattat gatcaagttg aacattctga
     3361 cggcgaagcg ttcggtaaat ttttcaaatt aatgttaaat caaggtatca atttagcacc
     3421 ttctaagttt gaagcttggt tcttaacaac tgaacataca gaagaagata ttaaacaaac
     3481 tttaaaagct gcagactatg cttttagtca aatgaaataa cttttaagga agtatatttt
     3541 taattgaatt aaaataaagc aaatgctcac atagtagatt cattttatat cgttaactat
     3601 taacgtttaa cttgatatgt cactatgtga gtttttattt tacaaattta tactatttta
     3661 atctctgact aaagttttac atcgctatca gtattatgta tgatttattt taacaactat
     3721 aaataagctt gaattttgta actagtaagt gtataacagt aatgaatacg aatattagat
     3781 attcaataaa cttaaaaggg gcgtcattat ttttgagact aggagctcgg atttttaaaa
     3841 ctggtatagc cattatttta gctatgtcta tcgcttcttt actaccggat gatgttggtc
     3901 tgaaagcctt agctggtgtc agtgctgttg ttgcaatgca acctagtatt tatcgttcat
     3961 ttaaaacagt ttctgatcaa gcattgggta acattatagg tgccatacta tctgttacaa
     4021 tggtaacaat ttttagtgat aattttatca ttatgggtgt taccgtcata gtacttattg
     4081 ctattttatt taaatttaat ttagcacatg ttgctacttt ggcgagtgta acagcattaa
     4141 tcattatggg acaacatacc ggttctttct atattaccgc cttttacagg tttgtacttg
     4201 taatgattgg tgtcataagt tcatctctag ttaactttgt gtttctacca cctaaatttg
     4261 aaacaaaaat ttactataat tcattaaata tatcctcaga tatttttatg tggtttaaat
     4321 tagtattaaa tgatacgacg gagtttaata atattaaaca agatagtcat aatttaaaac
     4381 aacgtgtcga aaagttagag aaaatttatg attactatag cgaagaacgt cctattacaa
     4441 aaaaacatat tcaccaacag aatagaaaga aaatactttt cagagaagta gttcagacga
     4501 ctagacaagc ttatgaagta ttaaacaaat tgtcgcgtta tcaaaacgac ttatatttac
     4561 ttaataacaa tttcctatta caaatcaaat tagatttaga ttcattaact gcttttcacg
     4621 agcaaatttt agctagcctt tctaaaaaag cacgttataa tgtgacacat gttgattatg
     4681 agttagataa tccgcagaaa aaagatttat tgtccacatt tcagcatgag ttaataaatc
     4741 atccttatca aacggaatat tcgtttgcca atgttatgca aattgttgca gccatcgaag
     4801 agtatcgaca ccatttagag catttagacc gcataagaat tagctttttc acatatcata
     4861 gatctgatgc agacattgaa attgttgaag aagactttga tttataaca
//
LOCUS       DALPQQ010000148         4880 bp    DNA     linear   BCT 22-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus strain K18-6-464
            SAMD00233528-rid16434743.denovo.149, whole genome shotgun sequence.
ACCESSION   DALPQQ010000148 DALPQQ010000000
VERSION     DALPQQ010000148.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMD00233528
            Sequence Read Archive: DRR236061
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 4880)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4880)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001543423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001543423.1
            Genome Coverage       :: 77x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/22/2022 17:09:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,811
            CDSs (total)                      :: 2,743
            Genes (coding)                    :: 2,689
            CDSs (with protein)               :: 2,689
            Genes (RNA)                       :: 68
            rRNAs                             :: 2, 4, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 4, 2 (16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 54
            CDSs (without protein)            :: 54
            Pseudo Genes (ambiguous residues) :: 0 of 54
            Pseudo Genes (frameshifted)       :: 27 of 54
            Pseudo Genes (incomplete)         :: 27 of 54
            Pseudo Genes (internal stop)      :: 10 of 54
            Pseudo Genes (multiple problems)  :: 10 of 54
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4880
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMD00233528-rid16434743.denovo.149"
                     /strain="K18-6-464"
                     /db_xref="taxon:1280"
                     /geo_loc_name="Japan: Niigata"
     gene            25..2643
                     /gene="mutS"
                     /locus_tag="O7798_002356"
     CDS             25..2643
                     /gene="mutS"
                     /locus_tag="O7798_002356"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011275903.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA mismatch repair protein MutS"
                     /protein_id="HDC2864556.1"
                     /translation="MSNVTPMMQQYLKIKSEYQDCLLFFRLGDFYEMFYEDAKEASRV
                     LEITLTKRDAKKENPIPMCGVPYHSADSYIDTLVNNGYKVAICEQMEDPKQTKGMVRR
                     EVVRIVTPGTVMEQGGVDDKQNNYILSFVMNQPEIALSYCDVSTGELKVTHFNDEATL
                     LNEITTINPNEVVINDNISDNLKRQINMVTETITVRETLSSEIYSVNQTEHKLMYQAT
                     QLLLDYIHHTQKRDLSHIEDVVQYAAIDYMKMDFYAKRNLELTESIRLKSKKGTLLWL
                     MDETKTPMGARRLKQWIDRPLISKEQIEARLDIVDEFSAHFIERDTLRTYLNQVYDIE
                     RLVGRVSYGNVNARDLIQLKHSISEIPNIKALLNSMNQNTLVQVNQLEPLDDLLDILE
                     QSLVEEPPISVKDGGLFKVGFNTQLDEYLEASKNGKTWLAELQAKERQRTGIKSLKIS
                     FNKVFGYFIEITRANLQNFEPSEFGYMRKQTLSNAERFITDELKEKEDIILGAEDKAI
                     ELEYQLFVQLREEVKKYTERLQQQAKIISELDCLQSFAEIAQKYNYTRPSFSENKTLE
                     LVESRHPVVERVMDYNDYVPNNCRLDNETFIYLITGPNMSGKSTYMRQVAIISIMAQM
                     GAYVPCKEAVLPIFDQIFTRIGAADDLVSGKSTFMVEMLEAQKALTYATEDSLIIFDE
                     IGRGTSTYDGLALAQAMIEYVAETSHAKTLFSTHYHELTTLDQALPSLKNVHVAANEY
                     KGELIFLHKVKDGAVDDSYGIQVAKLADLPEKVISRAQVILSEFEASAGKKSSISNLK
                     MVENEPEINQENLNLSVEETTDTLSQKDFEQASFDLFENDQESEIELQIKNLNLSNMT
                     PIEALVKLSELQNQLK"
     gene            2656..4665
                     /gene="mutL"
                     /locus_tag="O7798_002357"
     CDS             2656..4665
                     /gene="mutL"
                     /locus_tag="O7798_002357"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499806.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA mismatch repair endonuclease MutL"
                     /protein_id="HDC2864557.1"
                     /translation="MGKIKELQTSLANKIAAGEVVERPSSVVKELLENAIDAGATEIS
                     IEVEESGVQSIRVVDNGSGIEAEDLGLVFHRHATSKLDQDEDLFHIRTLGFRGEALAS
                     ISSVAKVTLKTCTDNANGNEIYVENGEILNHKPAKAKKGTDILVESLFYNTPARLKYI
                     KSLYTELGKITDIVNRMAMSHPDIRIALISDGKTMLSTNGSGRTNEVMAEIYGMKVAR
                     DLVHISGDTSDYHIEGFVAKPEHSRSNKHYISIFINGRYIKNFMLNKAILEGYHTLLT
                     IGRFPICYINIEMDPILVDVNVHPTKLEVRLSKEEQLYQLIVSKIQEAFKDRILIPKN
                     NLDYVPKKNKVLHSFEQQKIEFEQRQNTENNQEKTFSSEESNSKPFMEENQNDEIVIK
                     EDSYNPFVTKISESLIADDESSGYNNTREKDEDYFKKQQEILQEMDQTFDSNDGTTVQ
                     NYENKASDDYYDVNDIKGTKSKDPKRRIPYMEIVGQVHGTYIIAQNEFGMYMIDQHAA
                     QERIKYEYFRDKIGEVTNEVQDLLIPLTFHFSKDEQLVIDQYKNELQQVGIMLEHFGG
                     HDYIVSSYPVWFPKDEVEEIIKDMIELILEEKKVDIKKLREDVAIMMSCKKSIKANHY
                     LQKHEMSDLIDQLREAEDPFTCPHGRPIIINFSKYELEKLFKRVM"
     gene            4671..>4880
                     /locus_tag="O7798_002358"
     CDS             4671..>4880
                     /locus_tag="O7798_002358"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499807.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycerol-3-phosphate responsive antiterminator"
                     /protein_id="HDC2864558.1"
                     /translation="MNQVNNNILPAIRNIKDLEKLIKTDYKMCVLLDMHIGHIKSIME
                     LLKQNHIECFIHIDLIKGLSHDEFAS"
BASE COUNT         1925 a          639 c          906 g         1410 t
ORIGIN      
        1 agacaagggt tgtgaagaaa taatatgtct aatgttacac caatgatgca gcaatattta
       61 aaaataaaat cagaatacca agattgctta ttatttttta gactaggtga tttctatgaa
      121 atgttttatg aagatgccaa ggaggcatca cgtgtacttg aaattacttt aactaaaaga
      181 gatgctaaaa aagaaaatcc aattccgatg tgtggtgttc cgtatcattc tgcagatagt
      241 tatatagata cacttgttaa taatggatat aaagtagcta tttgtgaaca gatggaagat
      301 ccgaaacaaa cgaaaggtat ggttagacgt gaggtagtaa gaattgtgac tccaggaact
      361 gtgatggagc aaggtggtgt agatgataaa caaaataact atattttaag ttttgttatg
      421 aatcaacctg aaattgcgct tagttactgt gatgtttcta ctggcgaatt aaaggttaca
      481 cattttaatg atgaagcgac tttattaaat gaaattacga cgataaaccc taacgaagtt
      541 gttatcaatg acaatatttc cgataattta aaaagacaaa ttaatatggt gacagaaaca
      601 ataacagtca gggaaacgtt atcatcagaa atctatagtg tgaatcaaac tgaacataaa
      661 ttaatgtatc aagcgacaca attattgcta gattatattc atcatacaca aaaacgtgat
      721 ttatcgcata tcgaggatgt tgttcaatat gcagctatag attatatgaa aatggatttt
      781 tatgctaaga gaaaccttga gttaacggaa agcattcgat taaaatcaaa aaaaggaacg
      841 ctactttggc taatggacga aacgaaaaca ccaatgggag cacgccgctt aaaacaatgg
      901 atagatagac cactaataag taaagaacaa attgaagcac gattagatat cgttgatgaa
      961 tttagtgctc atttcataga aagagacacc ttaagaacat atcttaatca agtgtatgat
     1021 attgaacgtc ttgttgggcg tgttagttac ggaaatgtta atgcgagaga tttaattcaa
     1081 cttaaacatt ccatttctga aataccgaat attaaagcat tactaaattc tatgaatcag
     1141 aatactcttg tacaagttaa tcaactagaa ccccttgatg atttacttga tatattagaa
     1201 cagagtttag tagaagaacc accaatttca gttaaagatg gcggactatt caaagttggt
     1261 tttaatacgc aattagatga atatcttgaa gcttcaaaaa acggaaaaac atggttagca
     1321 gaattacaag ccaaagaaag acaacgtaca ggaataaaat cattgaaaat aagctttaat
     1381 aaagtgtttg gttattttat agaaataaca cgtgccaact tgcaaaattt tgaaccaagt
     1441 gaatttggtt atatgaggaa gcaaacgtta tcgaatgctg aacgttttat aactgatgaa
     1501 cttaaagaaa aagaagatat cattttaggt gcggaagaca aagccatcga attagaatat
     1561 caattatttg ttcagctacg tgaagaagtt aaaaaatata ctgaacgttt acaacaacaa
     1621 gctaaaatta tttcagagct agattgttta cagagctttg cagaaattgc tcaaaaatat
     1681 aattacacta ggccttcatt tagtgaaaat aaaacattag aattagtgga atctaggcac
     1741 ccagtagtgg aaagagtaat ggattataat gactatgtgc ctaataattg tcgattagat
     1801 aatgaaacat ttatatattt aattacaggt ccgaatatgt ctggtaaatc gacatatatg
     1861 agacaagttg ccataattag tataatggcc caaatgggag cttatgtccc ttgtaaagag
     1921 gcagtgttac ctatatttga tcaaatattc actagaatag gtgcggcaga tgatttggtt
     1981 tcaggtaaga gtacgtttat ggtagaaatg ctagaagcac aaaaggcatt aacttatgca
     2041 acagaggata gtttgattat tttcgatgaa attggacgtg gtacttcaac gtatgacggt
     2101 ttagctttag cgcaggcaat gatagagtat gtagctgaaa catcacatgc taaaacgtta
     2161 ttttcaacac attatcatga attgacaaca ttagatcaag cattaccaag tctaaaaaat
     2221 gttcacgtcg ctgctaatga atataaaggt gaacttatat tcttgcataa agtcaaagat
     2281 ggtgcagttg acgatagtta tggtattcaa gttgcgaaat tagctgattt acctgaaaaa
     2341 gttattagca gagcacaagt gattctaagc gagtttgaag cgtctgctgg taaaaaatca
     2401 tcgatatcaa atttaaaaat ggtcgaaaat gaacctgaaa ttaatcaaga aaatttaaac
     2461 ttaagtgttg aagaaacaac tgatacttta tctcaaaaag actttgaaca agcatcattt
     2521 gatttgtttg aaaatgatca agaaagcgag attgaactac aaattaaaaa tttgaattta
     2581 tctaatatga caccaattga ggcattggtg aagttaagtg aattacaaaa tcaattaaaa
     2641 tagaggtgtt gcaaaatggg gaaaattaaa gaactccaaa cctcattagc aaataaaatc
     2701 gcagcaggtg aagtagttga aagaccgagt tctgttgtga aagaactgtt ggaaaatgct
     2761 atagatgcag gcgctacaga aataagcatt gaagtagagg aatctggcgt ccaatctatt
     2821 cgcgtagtcg ataatggaag cggaattgaa gcggaagact taggattagt atttcataga
     2881 catgcgacta gtaaattaga tcaagatgaa gatttatttc atattaggac attaggattc
     2941 cgtggtgaag cactagccag tatttcatca gttgctaaag taacattgaa gacttgcacg
     3001 gataatgcta atggaaatga aatatatgta gaaaatggtg aaatattaaa tcataagcct
     3061 gcaaaagcga aaaaaggaac agatatactt gtagaatcat tattttataa tacaccagca
     3121 cgtttaaaat atattaaaag tttatacact gaactaggta aaataacaga tattgtcaac
     3181 agaatggcaa tgagccatcc ggacattcga atagcactca tttcagatgg caaaacaatg
     3241 ttaagtacaa atggttcagg acgaactaat gaagtgatgg cagagattta tgggatgaaa
     3301 gttgcacgag atttagtaca tatatctgga gatacaagtg attatcacat tgaaggtttt
     3361 gttgcaaagc ctgaacattc tagaagtaat aagcactata tttctatttt tattaatgga
     3421 cgatacatta aaaactttat gctaaataaa gcgattttag aaggctatca tacactctta
     3481 acaataggta ggttcccgat ttgttatatt aatattgaaa tggatccaat cttagtagac
     3541 gtaaatgttc atccaacaaa actagaagtg cgtttatcaa aagaagagca actataccaa
     3601 ttgattgtga gcaaaataca agaagcattt aaagaccgta tattaattcc taaaaataac
     3661 ttggattatg tgccaaaaaa aaataaagta ttacattcat tcgaacaaca aaaaatcgaa
     3721 tttgaacaaa gacaaaacac agagaataac caagagaaga cgttttcatc tgaagaaagt
     3781 aacagtaagc catttatgga agaaaatcaa aacgatgaga tagttataaa agaagattca
     3841 tataatccat tcgtaacgaa aatatctgaa agtttaatag ctgatgatga atcttctggt
     3901 tataataata cacgtgaaaa agatgaagac tacttcaaaa aacaacaaga aattttacaa
     3961 gaaatggatc aaacatttga ttcaaatgat ggtacaactg tgcaaaatta tgagaataaa
     4021 gcgtctgatg attattatga tgtaaacgat attaaaggaa caaaaagtaa agaccctaaa
     4081 cgaagaattc catatatgga aattgttgga caagtacatg gaacgtatat tattgctcaa
     4141 aatgaatttg gcatgtacat gattgaccag catgcagctc aagaaagaat aaaatatgaa
     4201 tattttcgag ataaaatagg tgaggttacc aatgaagtac aagatttatt aatcccgtta
     4261 acatttcatt tttcaaaaga tgaacaatta gtcattgatc aatataaaaa tgagcttcaa
     4321 caagtaggta tcatgttaga acattttggt ggtcatgatt atattgtaag tagctatcca
     4381 gtttggttcc ctaaagatga agtagaagaa attattaaag atatgattga gctaattttg
     4441 gaagagaaaa aagtagatat caaaaaatta cgtgaagatg tagcaatcat gatgtcatgt
     4501 aaaaaatcca ttaaagcgaa tcattattta caaaaacatg aaatgtctga tttaattgat
     4561 caattaagag aagcggaaga tccatttaca tgtccacatg gtcgtccaat aatcattaat
     4621 ttttcaaaat acgaattaga aaaattattt aagcgtgtga tgtagagagg atgaatcaag
     4681 tgaataacaa catattgcct gctataagaa acattaaaga tttagagaaa ctgattaaaa
     4741 cagactataa aatgtgtgtg cttctagata tgcatatagg acatataaaa agtattatgg
     4801 aattgctgaa gcaaaatcat atagagtgtt ttattcatat agatttgata aaaggtttaa
     4861 gccacgatga atttgcaagt
//
LOCUS       DALPQQ010000149         4671 bp    DNA     linear   BCT 22-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus strain K18-6-464
            SAMD00233528-rid16434743.denovo.150, whole genome shotgun sequence.
ACCESSION   DALPQQ010000149 DALPQQ010000000
VERSION     DALPQQ010000149.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMD00233528
            Sequence Read Archive: DRR236061
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 4671)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4671)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001543423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001543423.1
            Genome Coverage       :: 77x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/22/2022 17:09:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,811
            CDSs (total)                      :: 2,743
            Genes (coding)                    :: 2,689
            CDSs (with protein)               :: 2,689
            Genes (RNA)                       :: 68
            rRNAs                             :: 2, 4, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 4, 2 (16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 54
            CDSs (without protein)            :: 54
            Pseudo Genes (ambiguous residues) :: 0 of 54
            Pseudo Genes (frameshifted)       :: 27 of 54
            Pseudo Genes (incomplete)         :: 27 of 54
            Pseudo Genes (internal stop)      :: 10 of 54
            Pseudo Genes (multiple problems)  :: 10 of 54
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4671
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMD00233528-rid16434743.denovo.150"
                     /strain="K18-6-464"
                     /db_xref="taxon:1280"
                     /geo_loc_name="Japan: Niigata"
     gene            <1..239
                     /locus_tag="O7798_002359"
     CDS             <1..239
                     /locus_tag="O7798_002359"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499945.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="two-component sensor histidine kinase"
                     /protein_id="HDC2864559.1"
                     /translation="RLKNKQKIIEITDHGIGIPEEDQDFIFDRFYRVDKSRSRSQGGN
                     GLGLSIAQKIIQLNGGSIKIKSEINKGTTFKIIF"
     gene            523..3321
                     /locus_tag="O7798_002360"
     CDS             523..3321
                     /locus_tag="O7798_002360"
                     /EC_number="1.2.4.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499944.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-oxoglutarate dehydrogenase E1 component"
                     /protein_id="HDC2864560.1"
                     /translation="MTNERKEVSEAPVNFGANLGLMLDLYDDFLQDPSSVPEDLQVLF
                     STIKNDDSIVPALKSTSSQNSDGTIKRVMRLIDNIRQYGHLKADIYPVNPPKRKHVPK
                     LEIEDFDLDQQTLEGISAGIVSDHFADIYDNAYEAILRMEKRYKGPIAFEYTHINNNT
                     ERGWLKRRIETPYKVTLNNNEKRALFKQLAYVEGFEKYLHKNFVGAKRFSIEGVDALV
                     PMLQRTITIAAKEGIKNIQIGMAHRGRLNVLTHVLEKPYEMMISEFMHTDPMKFLPED
                     GSLQLTAGWTGDVKYHLGGIKTTDSYGTMQRIALANNPSHLEIVAPVVEGRTRAAQDD
                     TQRAGAPTTDHHKAMPIIIHGDAAYPGQGINFETMNLGNLKGYSTGGSLHIITNNRIG
                     FTTEPIDARSTTYSTDVAKGYDVPIFHVNADDVEATIEAIDIAMEFRKEFHKDVVIDL
                     VGYRRFGHNEMDEPSITNPVPYQNIRKHDSVEYVFGKKLVNEGVISEDEMHSFIEQVQ
                     KELRQAHDKINKADKMDNPDMEKPADLALPLQADEQSFTFDHLKEINDALLTYPDGFN
                     ILKKLNKVLEKRHEPFNKEDGLVDWAQAEQLAFATILQDGTPIRLTGQDSERGTFSHR
                     HAVLHDEQTGETYTPLHHVPDQKATFDIHNSPLSEAAVVGFEYGYNVENKKSFNIWEA
                     QYGDFANMSQMIFDNFLFSSRSKWGERSGLTLFLPHAYEGQGPEHSSARLERFLQLAA
                     ENNCTVVNLSSSSNYFHLLRAQAASLDSEQMRPLVVMSPKSLLRNKTVAKPIDEFTSG
                     GFEPILTESYQADKVTKVILATGKMFIDLKEALAKNPDESVLLVAIERLYPFPEEEIE
                     ALLAQLPNLEEVSWVQEEPKNQGAWLYVYPYVKVLVADKYDLSYYGRIQRAAPAEGDG
                     EIHKLVQNKIIENALKNN"
     gene            3335..4603
                     /gene="sucB"
                     /locus_tag="O7798_002361"
     CDS             3335..4603
                     /gene="sucB"
                     /locus_tag="O7798_002361"
                     /EC_number="2.3.1.61"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499943.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydrolipoyllysine-residue succinyltransferase"
                     /protein_id="HDC2864561.1"
                     /translation="MPEVKVPELAESITEGTIAEWLKNVGDSVEKGEAILELETDKVN
                     VEVVSEEAGVLSEQLASEGDTVEVGQAIAIIGEGSGNASKENSNDNTPQQNEETNNKK
                     EETTNNSVDKAEVNQANDDNQQRINATPSARRYARENGVNLAEVSPKTNDVVRKEDID
                     KKQQAPASTQTTQQASAKEEKKYNQYPTKPVIREKMSRRKKTAAKKLLEVSNNTAMLT
                     TFNEVDMTNVMELRKRKKEQFMKDHDGTKLGFMSFFTKASVAALKKYPEVNAEIDGDD
                     MITKQYYDIGVAVSTDDGLLVPFVRDCDKKNFAEIEAEIANLAVKAREKKLGLDDMVN
                     GSFTITNGGIFGSMMSTPIINGNQAAILGMHSIITRPIAIDQDTIENRPMMYIALSYD
                     HRIIDGKEAVGFLKTIKELIENPEDLLLES"
BASE COUNT         1739 a          716 c          896 g         1320 t
ORIGIN      
        1 caaggttaaa aaataagcaa aaaataattg aaattacaga tcatggaatt ggtattccag
       61 aggaagatca agatttcatt tttgatcgct tttatcgagt ggataaatct cgttcaagaa
      121 gtcaaggcgg taatggactc ggattatcta ttgctcaaaa aatcattcaa ttaaacggag
      181 gatcgattaa aattaaaagt gaaattaaca aaggaacaac gtttaaaatc atattttaat
      241 catgactgag acgtcaatca aagtcatagg atcaattttt taagtacaca ttagctgtga
      301 ctaatgtata agaacaacta taaaacaaat aaacagtggt tctttatcat ttctgttgta
      361 ctcccaaaat ttacaataaa atacatctat aaacctagaa gaatcaacgc ttttgttgat
      421 tcttcttttt agcagataaa taggtaaatc tactttaaca aataactaaa tagtgatatt
      481 attacattgt aagcgtttca acatttttgt ggagggtgta aaatgactaa cgaaagaaaa
      541 gaagtttcag aggctcctgt aaacttcggt gcgaatttag gtctaatgtt agatctatat
      601 gatgactttt tacaagatcc atcatctgta ccagaagatt tacaagtctt attcagcaca
      661 attaagaatg atgactcaat tgtaccagct ttaaaaagta caagtagtca aaatagcgac
      721 ggcacaatta agcgtgtcat gcgtttaatt gataatattc gccaatacgg gcatcttaaa
      781 gccgatattt atcctgtaaa tcctccaaaa aggaaacatg tacctaaatt agagattgaa
      841 gactttgatt tagatcaaca gactttggaa ggtatatcag caggaattgt ttcagatcac
      901 tttgccgaca tttatgataa tgcttatgaa gcaattttaa gaatggaaaa acgttacaaa
      961 ggaccaattg catttgagta tacacatatt aataacaata ccgaacgtgg ttggttaaaa
     1021 agaagaattg aaacgccata taaagtaacg ttaaataata acgaaaaaag ggcactattc
     1081 aaacaattag cgtatgttga agggtttgaa aaatatcttc ataaaaactt cgttggtgca
     1141 aagcgttttt caattgaagg ggtagacgca cttgtaccga tgttacaacg tactattacg
     1201 attgctgcga aagaaggtat taaaaatata caaataggca tggctcaccg tggacgttta
     1261 aacgttttaa cgcatgtctt agaaaaaccg tacgaaatga tgatttcaga atttatgcat
     1321 acagatccaa tgaaattctt acctgaagat ggtagcttgc agttaactgc tggatggact
     1381 ggtgatgtga aatatcacct tggtggcatt aaaactactg attcatacgg tacaatgcag
     1441 cgtattgcac tggctaacaa tccaagtcac ttggaaattg ttgcacctgt tgttgagggg
     1501 cgtacgagag cagcacaaga tgatacacaa cgagctgggg ctccgacgac tgatcatcat
     1561 aaagcaatgc caattattat acatggcgat gctgcttatc ctggtcaagg aattaacttc
     1621 gaaacaatga acttaggaaa cttgaaaggc tattctacgg gtggttcatt gcatattatt
     1681 actaacaata gaattggatt tactacagaa ccaattgatg cacgttcaac aacttattct
     1741 acagatgtgg ccaaaggtta tgatgtgcca atattccatg tcaatgcaga tgacgttgaa
     1801 gctactattg aagcaattga tattgcaatg gaatttagaa aagagtttca taaagacgtc
     1861 gttattgatt tagtaggtta tcgtcgtttc ggacataacg aaatggatga accatcaatt
     1921 actaatccag ttccttatca gaatattcgc aaacatgact ctgttgaata tgtgtttggt
     1981 aaaaagcttg ttaatgaagg tgtcatttca gaagatgaaa tgcattcatt tatagaacaa
     2041 gtccaaaagg aactaagaca agctcatgat aaaattaata aagctgataa aatggataat
     2101 ccagatatgg aaaagcctgc agatcttgca ttaccgttac aagcagacga acaatcattt
     2161 acttttgatc acttgaaaga aataaatgat gcattgttaa catatccgga tggctttaac
     2221 attttgaaaa agttaaacaa agttcttgag aagcgtcatg agccgtttaa taaagaagat
     2281 ggtttagttg attgggcaca agcagaacaa cttgcatttg cgacaatttt acaagatggt
     2341 acaccgattc gcttaactgg tcaagatagt gaacgtggta cattcagtca taggcatgcc
     2401 gtgttacatg atgagcaaac aggtgaaaca tatacacctt tacatcatgt tcctgatcaa
     2461 aaagcgacat ttgatataca caattctccg ctttcagaag cagcagtagt tggttttgaa
     2521 tacggctata atgtggaaaa caaaaaaagc ttcaatattt gggaagcaca atatggtgat
     2581 tttgcaaata tgtcacaaat gatttttgac aacttcttat tcagttctcg ctcaaaatgg
     2641 ggagaacgtt caggattaac attattctta cctcatgcat atgagggtca agggcctgaa
     2701 cattcatcag caagattaga gcgattttta caattagctg ctgaaaataa ttgcacagtt
     2761 gtcaacttat ctagttcaag taattatttc cacttattgc gtgcacaagc ggctagttta
     2821 gattctgaac aaatgcgacc attggttgtt atgtcaccaa aaagcttact gagaaataaa
     2881 acagttgcaa aaccaattga tgaatttact tctggtggat ttgagccaat tttgacagaa
     2941 tcatatcaag cggataaggt tacaaaagtt attttggcaa ctggtaaaat gttcattgat
     3001 ttaaaagaag cattagctaa aaatccagac gaatcagtat tactcgttgc gattgaaaga
     3061 ttgtatccat tcccagagga agagattgaa gcattactag cacaattgcc aaaccttgaa
     3121 gaagtgtcat gggtacaaga agaacctaaa aatcaaggtg catggttata tgtctatcca
     3181 tatgttaaag tgctagttgc agataaatat gatttaagtt attatggcag aattcaaagg
     3241 gctgctccag ctgaaggcga tggagaaatt cataaacttg ttcaaaataa aattatagaa
     3301 aatgcattaa aaaataacta gggggaaata agtcatgcca gaggttaaag ttccagaatt
     3361 agcagaatct attacagaag gtaccattgc agaatggttg aaaaacgtag gggatagcgt
     3421 agaaaaaggt gaagctattc ttgaattaga aactgataaa gttaatgtcg aagttgtatc
     3481 tgaagaagca ggtgtattat ctgaacaact tgcaagtgaa ggcgacactg tagaagttgg
     3541 acaagcaatt gctatcatcg gcgaaggtag tggcaatgct tctaaagaaa atagtaacga
     3601 caatactcca caacaaaatg aagaaacaaa taataaaaaa gaagaaacaa caaataattc
     3661 ggtagataaa gctgaagtaa atcaagcaaa tgatgacaat cagcaacgta ttaatgctac
     3721 gccttctgcg cgtcgatatg ctcgtgaaaa tggtgtgaat cttgctgaag taagtccgaa
     3781 aacaaatgat gtggttcgta aagaagatat tgataagaaa caacaggcac cggcatcaac
     3841 acaaacaaca caacaagcat ctgcaaaaga agagaaaaaa tacaatcaat atcctacaaa
     3901 accagtgatt cgtgaaaaaa tgtcacgtag aaagaaaaca gctgccaaaa aattattaga
     3961 ggtatctaat aatacagcta tgttaacaac atttaacgaa gttgacatga caaatgttat
     4021 ggaattgcgt aaacgtaaga aagaacaatt tatgaaagat catgatggta ctaaattagg
     4081 atttatgtca ttctttacta aagcttctgt agcagctttg aaaaagtatc cagaagttaa
     4141 tgcagaaatc gacggcgacg acatgattac gaaacaatat tatgatattg gtgtagctgt
     4201 ttctacagat gatggattat tagtaccatt tgtaagagat tgtgataaaa agaattttgc
     4261 agaaatcgaa gcagaaattg ctaatttagc agttaaagca cgagagaaaa aacttggctt
     4321 agatgatatg gttaatggtt catttacgat tacaaatggc ggtatttttg gatcaatgat
     4381 gagtacgcca attatcaatg gtaatcaagc tgcaatctta ggcatgcatt caattattac
     4441 aagaccaatt gcgattgatc aagatacaat cgaaaatcgt ccaatgatgt atattgcatt
     4501 aagctatgat catagaatta ttgacggtaa agaagcagtt ggattcttaa aaacaattaa
     4561 agaattaatt gaaaacccag aagacttatt attagaatct taatccacaa cacaaaatag
     4621 tttactattc ctaaaagcgg gattaaatca ataacaaaca gcagtaagat t
//
LOCUS       DALPQQ010000150         4573 bp    DNA     linear   BCT 22-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus strain K18-6-464
            SAMD00233528-rid16434743.denovo.151, whole genome shotgun sequence.
ACCESSION   DALPQQ010000150 DALPQQ010000000
VERSION     DALPQQ010000150.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMD00233528
            Sequence Read Archive: DRR236061
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 4573)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4573)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001543423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001543423.1
            Genome Coverage       :: 77x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/22/2022 17:09:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,811
            CDSs (total)                      :: 2,743
            Genes (coding)                    :: 2,689
            CDSs (with protein)               :: 2,689
            Genes (RNA)                       :: 68
            rRNAs                             :: 2, 4, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 4, 2 (16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 54
            CDSs (without protein)            :: 54
            Pseudo Genes (ambiguous residues) :: 0 of 54
            Pseudo Genes (frameshifted)       :: 27 of 54
            Pseudo Genes (incomplete)         :: 27 of 54
            Pseudo Genes (internal stop)      :: 10 of 54
            Pseudo Genes (multiple problems)  :: 10 of 54
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4573
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMD00233528-rid16434743.denovo.151"
                     /strain="K18-6-464"
                     /db_xref="taxon:1280"
                     /geo_loc_name="Japan: Niigata"
     gene            complement(<1..953)
                     /locus_tag="O7798_002362"
     CDS             complement(<1..953)
                     /locus_tag="O7798_002362"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499521.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bacteriocin-associated integral membrane family
                     protein"
                     /protein_id="HDC2864562.1"
                     /translation="MKWFKLILDVTIFILIAILLFVYTYKENEEILPDTKYPIAVTDW
                     NKKYSKNEIYKRIDQFAKNENVAIYKSTSNYTNKNVDKDIYVFNKSKAATITPFNAKY
                     NIHYLSDDEVLKKDIKGSYFVKDKNFDVSKFINFLKEYGVTAESYKIDHMMIAVGVIK
                     QMNIVVPLSSLLIVYFIYYIFEKNINFKAYAIKYLNGFTLRKIIFENFSKKCTYWVTL
                     IITQILLTTSVLWILNYTGNLDLFILRIVLLSCLFILTISVINLWTFLMLLNLNIANM
                     IKGKQHFKTIRFINTVCKSILLVLIANVMIENTSVIKDLNK"
     gene            complement(997..1269)
                     /locus_tag="O7798_002363"
     CDS             complement(997..1269)
                     /locus_tag="O7798_002363"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001790097.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lactococcin 972 family bacteriocin"
                     /protein_id="HDC2864563.1"
                     /translation="MFGTILYLTLALGLSTAAYASTEYAEGGTWSHGVGSKYVWSYYY
                     HGHKGHGATAIGKYRSFSGYTRAGVKAKASATKHNWWVNRAYYNIY"
     gene            complement(1279..1380)
                     /locus_tag="O7798_002364"
     CDS             complement(1279..1380)
                     /locus_tag="O7798_002364"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499520.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDC2864564.1"
                     /translation="MKFAANKLTLTIFRKFCINNEKEIWIKYEEVFL"
     gene            complement(1919..2064)
                     /locus_tag="O7798_002365"
                     /pseudo
     CDS             complement(1919..2064)
                     /locus_tag="O7798_002365"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500662.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="putative holin-like toxin"
     gene            complement(2297..2899)
                     /locus_tag="O7798_002366"
     CDS             complement(2297..2899)
                     /locus_tag="O7798_002366"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499518.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CPBP family intramembrane metalloprotease"
                     /protein_id="HDC2864565.1"
                     /translation="MNKISKALTWFIISFIIFHLILFIMWGEHQEYWYLYTGIMLIAG
                     ISYVFYQRDIESKRLLTSIGVGIITAIILIMLQLLFSLITSNLSYSSLIKELARTGVN
                     WKWQMLVTLLFVIPCHELYMRTVLQKELTHFSIPKWVAILITAICSSSLFIYLDNWWI
                     VTFIFVAQVILSLSYEYTRRIATTSVAQIVAIILLLIFNA"
     gene            complement(2914..3090)
                     /locus_tag="O7798_002367"
     CDS             complement(2914..3090)
                     /locus_tag="O7798_002367"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499517.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YkvS family protein"
                     /protein_id="HDC2864566.1"
                     /translation="MTVAEVGNIVEFMDGLRGRVEKINDNSVIVDLTIMENFNDLDLP
                     EKTVINHKRYKIVE"
     gene            3289..4275
                     /locus_tag="O7798_002368"
     CDS             3289..4275
                     /locus_tag="O7798_002368"
                     /EC_number="6.3.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499516.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoate--protein ligase"
                     /protein_id="HDC2864567.1"
                     /translation="MKFISNNNITDPTLNLAMEEYVLKNLPAEESYFLFYINRPSIIV
                     GKNQNTIEEVNQTYIDAHNIDVVRRISGGGAVYHDTGNLNFSFITDDDGNSFHNFQKF
                     TEPIVQALQSLGVNAELTGRNDIQVGQAKISGNAMVKVKNRMFSHGTLMLNSDLDEVQ
                     NALKVNPAKIKSKGIKSVRKRVANIQEFLNDPLEIEEFKKIILKTIFGETEVEEYKLT
                     DEDWENIEKLSNDKYRTWEWNYGRNPKYNFEREEKFEKGFVQIKFDVKRGKIEHAKIF
                     GDFFGVGDVTDLENALVGCLHDFEHIEEALSEYDLYHYFGDIDRHELIRLMS"
     gene            complement(4356..>4573)
                     /locus_tag="O7798_002369"
     CDS             complement(4356..>4573)
                     /locus_tag="O7798_002369"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499515.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="IDEAL domain-containing protein"
                     /protein_id="HDC2864568.1"
                     /translation="KYNTNVKHTTLEAFVTTVNDLGIELIINEALREVRKRQLIELID
                     DALVNKDEAAFNQYTAEYKNLEAFLGE"
BASE COUNT         1674 a          675 c          627 g         1597 t
ORIGIN      
        1 attttattca aatctttaat aacactagta ttttctatca ttacattagc tattagtact
       61 aagagaatac ttttacaaac tgtattaata aaacgaattg ttttaaagtg ctgcttacct
      121 ttaatcatat ttgcaatatt taaatttagt aacattaaga aagtccataa attaataaca
      181 ctaatcgtta aaatgaaaag acatgaaagc agaactattc ttaatatgaa taaatctaaa
      241 ttacccgtgt aatttaatat ccaaagtaca cttgtagtta aaagaatttg agttatgatt
      301 aacgttaccc aatacgtgca tttctttgaa aaattttcga aaattatttt tcttaatgta
      361 aaaccattta aatacttaat cgcatacgct ttgaaattaa tgttcttttc gaaaatataa
      421 taaataaaat aaacgattaa aagtgaggat aatggaacta ctatattcat ttgtttaatg
      481 acaccaacgg caatcatcat atgatctatt ttgtatgatt cagcagtaac accatattct
      541 tttaaaaaat ttatgaattt agacacgtca aaatttttgt cttttacaaa ataactccct
      601 ttgatatctt tttttaatac ttcgtcgtca cttaaataat gaatgttata tttagcatta
      661 aaaggagtga tagttgctgc ttttgattta ttaaatacat atatatcttt atctacgttt
      721 ttgtttgtat aatttgaagt tgatttatag attgctacgt tctcattttt agcgaattga
      781 tctatacgtt tataaatctc atttttacta tattttttat tccagtcagt taccgctata
      841 gggtatttag tatcaggcaa tatttcttcg ttttctttat atgtataaac aaataacaat
      901 atagcaatca gaatgaagat tgtaacatca agtattaatt tgaaccattt catgttgtac
      961 ctcttgcgtt gtttattttc tatgattttt tagtatttaa taaatgttat aatacgctct
     1021 attgacccac caattatgtt tagtagctga tgcttttgct tttacaccag ctcttgtata
     1081 accactaaat gatctatatt ttccaatagc tgttgcacca tgtcctttat gaccatgata
     1141 ataatacgac caaacatact tactgccgac accatgactc caagtgcctc cttctgcgta
     1201 ttctgtagat gcataagctg ctgttgataa tccaagtgct aaagttaaat ataatatagt
     1261 gccaaaaatt ttattcttct ataaaaacac ctcttcatat ttaatccata tctctttttc
     1321 gttatttata cagaattttc tgaaaatagt caaggttaat ttatttgctg caaatttcaa
     1381 ccactttatg ttaaatggac atcaaagtat aattgtatta ttattaaatt gtgcagtgta
     1441 taaatagacg atatgcagga acatgtcgcc tattgagccc gttaaaaaga cggtgactaa
     1501 atgagatttt ctttaaccat cattcgttgt caaagtttgg aaatgatggt tgttttttat
     1561 tgtttaaatt aatcattgcg acttctatat caatgaaagt tatattaata tatgaacttc
     1621 attacatatt caatagaaat cacttattta taagtactac catataatca taattgattt
     1681 ctaccacagt atgattttcc tttcaaatct gacatgttta gcaggcaata tacggaaaat
     1741 acttcaaaat tttgttacac atctaataaa aatagacaat taaataaaag atatgttact
     1801 ataaaaatgt aaaaagacga catgcaggaa catgtcgcct aatgagcccg ttaaaaagac
     1861 ggtgactaaa tgagattttc tttaaccatc attctatgtc aaagttttga aatgatggtt
     1921 attttttatt gcttaaattt attattgcta ctactatacc aatgaaagtg acgataaaca
     1981 taccgaaact taacattaaa tgtaatgcgt ttgcaataga tatcacaata ggcttttcct
     2041 ttcaaaagtg ttaagtaatg ccataggcac cacccccctt tactcagata gccaccatca
     2101 attcaacttg ctcaaaaata ttataccatt tttataaaat atttagtaat aaaaactgac
     2161 taaaacctaa tctcaataat aaccgcttgc tgttaaaaaa tattaccact ataatgaagc
     2221 atgcctcgaa tcttcgtatt gctattctta agcaaaaaag cttttcttag aacacatacg
     2281 tctaagaaaa gcttatttaa gcattaaaaa ttaataacaa tataatagct acaatttgtg
     2341 caacggatgt tgttgctata cgtcgagtat actcataact taatgataat atcacttgtg
     2401 caacaaatat aaatgttact atccaccaat tatctaaata aataaataat gaactagaac
     2461 aaattgcagt tattaatata gctacccatt tcggtattga aaaatgtgtt aattcttttt
     2521 gtaaaacagt tctcatatat aactcgtgac atggaatgac aaaaagtaaa gttactaaca
     2581 tttgccactt ccaattgaca cctgttcttg ctaattcttt aattaatgaa ctataactta
     2641 aattagaagt tataagtgag aataaaagtt gaagcataat taaaataatt gccgtaataa
     2701 taccaacacc aattgatgta agcaaccgct tagattcaat atctctttga taaaatacat
     2761 aactgatacc agcaattagc attatacctg tatataaata ccagtattct tggtgttcgc
     2821 cccacataat aaataatatg agatgaaata taatgaaact tataataaac caagttaaag
     2881 ccttcgagat tttattcatt ataacttacc ttcttattca acaatcttat atcgtttatg
     2941 attgataaca gttttttccg gtaaatcaag gtcattaaaa ttttccataa ttgttaagtc
     3001 aacaataaca gagttatcgt tgattttttc aacacgacct cttaatccat ccataaactc
     3061 aacaatgtta cccacttctg caacagtcat tttaagtcct ccttaaatca taactaaatt
     3121 atattgtact aaaattcact taacaaataa actattaaca atcaaaaata ataaaatgta
     3181 actttaagcc gatatttaga atgatttgtg agtatataat tggcattttg agcaaagtta
     3241 aggcataaat aagtagagaa tatatataga tataagggag agattgtaat gaaattcatt
     3301 agtaataata atattacaga tccaacttta aacttagcaa tggaagaata tgttttaaaa
     3361 aatttaccag cagaagaaag ttacttttta ttttacataa atagaccatc tatcattgtt
     3421 ggaaagaatc aaaatacgat agaggaagta aatcagacat atatcgatgc tcacaacatc
     3481 gatgtagtaa gaagaatttc tggtggtggc gctgtttatc atgatactgg caatttaaac
     3541 tttagtttta taacagatga tgatggtaac agtttccaca atttccaaaa attcactgaa
     3601 ccaattgttc aagcattaca atctttaggc gtaaatgctg aattaactgg tcgtaacgat
     3661 attcaagttg gacaagcgaa aatctcaggg aatgctatgg ttaaagttaa aaatagaatg
     3721 tttagtcatg gtacgttgat gttaaatagt gatttagacg aagttcagaa tgcactaaaa
     3781 gttaatccag ctaagattaa atcaaaaggt attaaatctg ttcgtaaacg ggtagcaaac
     3841 attcaagaat ttttaaatga ccctttagaa attgaagaat ttaaaaaaat catcttgaaa
     3901 actatctttg gagaaactga agtagaagaa tataaattaa cggatgaaga ttgggaaaat
     3961 attgaaaagt taagtaacga caaatataga acttgggaat ggaattatgg tagaaaccct
     4021 aaatataact ttgaacgcga ggaaaaattt gaaaaaggat ttgtacaaat taagtttgat
     4081 gttaaacgag gtaaaatcga acatgcaaaa atattcggtg atttctttgg tgtcggagat
     4141 gtcactgatc ttgaaaatgc attagttggc tgtctacacg actttgagca catagaagaa
     4201 gcactatcag aatatgattt atatcattat ttcggtgaca tagatagaca tgaattaatt
     4261 agattaatgt cataaacgat taaaggacta ttcttacatg tatgagatgt taagaatagt
     4321 ccttttatga ttgcgttatg gaattcgaat caatgttatt caccgagaaa tgcctccaaa
     4381 tttttgtatt ctgccgtata ttgattaaat gctgcttcat ctttattgac gagtgcgtca
     4441 tctataagtt ctatgagctg tcgttttctt acctctcgaa gtgcttcatt gataattaat
     4501 tcaataccca aatcattgac agttgtgaca aacgcttcta aagttgtatg tttaacatta
     4561 gtattgtatt tca
//
LOCUS       DALPQQ010000151         4559 bp    DNA     linear   BCT 22-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus strain K18-6-464
            SAMD00233528-rid16434743.denovo.152, whole genome shotgun sequence.
ACCESSION   DALPQQ010000151 DALPQQ010000000
VERSION     DALPQQ010000151.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMD00233528
            Sequence Read Archive: DRR236061
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 4559)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4559)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001543423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001543423.1
            Genome Coverage       :: 77x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/22/2022 17:09:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,811
            CDSs (total)                      :: 2,743
            Genes (coding)                    :: 2,689
            CDSs (with protein)               :: 2,689
            Genes (RNA)                       :: 68
            rRNAs                             :: 2, 4, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 4, 2 (16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 54
            CDSs (without protein)            :: 54
            Pseudo Genes (ambiguous residues) :: 0 of 54
            Pseudo Genes (frameshifted)       :: 27 of 54
            Pseudo Genes (incomplete)         :: 27 of 54
            Pseudo Genes (internal stop)      :: 10 of 54
            Pseudo Genes (multiple problems)  :: 10 of 54
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4559
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMD00233528-rid16434743.denovo.152"
                     /strain="K18-6-464"
                     /db_xref="taxon:1280"
                     /geo_loc_name="Japan: Niigata"
     gene            <1..176
                     /locus_tag="O7798_002370"
     CDS             <1..176
                     /locus_tag="O7798_002370"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499991.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="biotin--[acetyl-CoA-carboxylase] ligase"
                     /protein_id="HDC2864569.1"
                     /translation="IREEYTAASNIWNRTLLFTENDKQFKGQAIDLDYDGYLIVRDEA
                     GESHRLISADIDF"
     gene            200..2893
                     /locus_tag="O7798_002371"
     CDS             200..2893
                     /locus_tag="O7798_002371"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499990.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent helicase DinG"
                     /protein_id="HDC2864570.1"
                     /translation="MGMATYAVVDLETTGNQLDFDDIIQIGITFVRNNQIIDTYHSMI
                     RTNLEIPPFIQALTSIEENMLQQAPYFNQVAQEIYDKIKDCIFVAHNVDFDLNFIKKA
                     FKDCNIQYRPKKVIDTLEIFKIAFPTDKSYQLSELAEAHGITLANAHRADEDAATTAK
                     LMILAFEKFEKLPLDTLKQLYYLSKQLKYDLYDIFFEMVRQYDAKPLDKSYEKFEQII
                     YRKQVDFKKPTTNYNGSLKSLYSKAVDQLGLTYRPQQLYLAETILDQLMHSEKAMIEA
                     SLGSGKSLAYLLAALMYNIETGKHVMISTNTKLLQSQLLEKDIPAMNEALNFKINALL
                     IKSKSDYISLGLISQILKDDTSNYEVNILKMQLLIWITETPSGDIQELNLKGGQKMYF
                     DQKIETYVPARHDVHYYNFIKRNAQNIQIGITNHAHLIHSDVENSIYQLFDDCIVDEA
                     HRLPDYALNQVTNELSYADIKYQLGLIGKNENEKLLKAIDQLEKQRILEKLDIAPIDI
                     FGLKASMNEIHELNEQLFSTIFTIINDSDVYDDDIHRFHNVFTFETKDILKDLHAIID
                     KLNKTLEIFNGISHKTVKSLRKQLLYLKDKFKNIEQSLKAGHTSFISIKNLSQKSTIR
                     LYVKDYAVKDVLTKQVLEKFKSLIFISGTLKFNHSFEAFKQLFNKDVHFNTFEVNTSL
                     QSAKNTSVFIPSDVASYQYKNIDEYVASIVSYIIEYTTITSSKCLVLFTSYKMMHMVQ
                     DMLNELPEFEDYVVLTQQQNQNYKIVQQFNNFDKAILLGTSTFFEGFDFQANGIKCVM
                     IAKLPFMNKHNAKYWLMDSEFTSTFKEYVLPDAVTRFRQGLGRLIRNENDRGIIVSFD
                     DRLINSNYKNFFEQTLENYRQKKGDIQQFGKLLRQIQKKKK"
     gene            3215..4507
                     /gene="asnS"
                     /locus_tag="O7798_002372"
     CDS             3215..4507
                     /gene="asnS"
                     /locus_tag="O7798_002372"
                     /EC_number="6.1.1.22"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499989.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="asparagine--tRNA ligase"
                     /protein_id="HDC2864571.1"
                     /translation="MKTTIKQAKDHLNQDVTIGAWLTNKRSSGKIAFLQLRDGTGFMQ
                     GVVVKSEVDEEVFKLAKEITQESSLYVTGTITEDNRSDLGYEMQVKSIEVISEAHDYP
                     ITPKNHGTEFLMDHRHLWLRSKKQHAVMKIRNEVIRATYEFFNKDGFTKVDPPILTAS
                     APEGTSELFHTKYFDQDAFLSQSGQLYLEAAAMAHGKVFSFGPTFRAEKSKTRRHLIE
                     FWMIEGEMAFTNHAESLEIQEQYVTHVVKSVLENCKLELKILERDTSKLEKVATPFPR
                     ISYDDAIEFLKAEGFDDIEWGEDFGAPHETAIANHYDLPVFITNYPTKIKPFYMQPNP
                     ENEETVLCADLIAPEGYGEIIGGSERVDDLELLEQRVKEHGLDEEAYSYYLDLRRYGS
                     VPHCGFGLGLERTVAWISGVEHVRETAPFPRLLNRLYP"
BASE COUNT         1690 a          622 c          807 g         1440 t
ORIGIN      
        1 aaattcgtga agaatatact gcagcttcta atatttggaa tagaacgttg ctatttacag
       61 aaaatgataa acagtttaaa ggacaagcaa ttgatttaga ttacgatggc tatctaattg
      121 ttagagatga agcgggtgaa tcacaccgtt taattagtgc agatatagat ttttaacact
      181 aaagcaagga gagatagcta tgggtatggc aacctatgcc gttgtggatt tggaaacaac
      241 aggcaaccaa ttagattttg acgatatcat tcaaattggt ataacgtttg tgcgcaataa
      301 ccaaattatt gatacatatc attctatgat tagaacaaat ttagagattc cgccgttcat
      361 tcaagcgtta acatccattg aagaaaatat gctacaacaa gcgccatatt ttaatcaagt
      421 tgcacaagaa atctacgata agataaaaga ttgcattttt gtagctcata atgtagattt
      481 tgatttgaat tttattaaaa aggcatttaa agattgtaat attcaatatc gtcccaaaaa
      541 agttatagat acactagaaa tctttaaaat agcttttcct acagataaaa gctatcaatt
      601 aagtgaatta gcagaggcac atggtattac cttagcaaat gcccatcgag ctgacgaaga
      661 tgccgctact actgctaaat tgatgatatt agcttttgaa aaatttgaaa agttaccgtt
      721 agatactttg aagcaattat attatttaag taaacagttg aaatacgatt tgtatgatat
      781 tttctttgag atggttaggc aatatgatgc aaagccattg gataaatcgt acgaaaagtt
      841 cgaacagatt atctatcgta agcaagttga ttttaaaaag ccgacaacaa attataatgg
      901 cagcttgaag tctttatata gcaaagctgt agatcaactt ggcttaacat atcgaccgca
      961 acaattatat ttagcggaaa ctatattaga tcagctcatg catagtgaaa aagcaatgat
     1021 tgaagcatca ctaggcagtg gtaaatcatt agcatattta cttgcggcct tgatgtataa
     1081 tattgaaact gggaagcatg tcatgatttc taccaatact aaattactgc aaagtcaatt
     1141 gttagaaaaa gatattccag caatgaatga agcgttgaat tttaaaatta atgcactatt
     1201 gattaaaagt aaaagtgatt acatttcatt ggggcttatt agtcaaattt taaaagatga
     1261 cacaagtaat tacgaagtga atatcttgaa aatgcaattg ctgatttgga ttacagagac
     1321 gccgtccgga gatatacagg aattaaattt aaaaggtggt caaaagatgt attttgacca
     1381 gaaaattgaa acatatgtac cggcacgtca cgatgttcat tattataatt ttattaagcg
     1441 aaatgcacag aacattcaaa ttggtattac aaatcatgca catttaattc attctgatgt
     1501 tgaaaattca atatatcaat tgtttgatga ttgtatagtg gatgaagcac atcgcttacc
     1561 agactatgcc ttaaatcaag tgacaaatga gttgagttat gctgatatta aatatcagct
     1621 tggtttgatt ggtaaaaacg aaaatgaaaa attgttaaag gcaattgatc aactggaaaa
     1681 gcagcgaatt ttggaaaaat tagatattgc accaattgat atttttggct tgaaggctag
     1741 tatgaatgag attcatgagt taaatgagca attgttctca acgatattta cgattatcaa
     1801 tgattctgat gtttatgatg atgatattca tcgcttccat aatgtattta cttttgaaac
     1861 aaaagacatt ttgaaggatt tacatgcgat tatcgataag ttaaataaaa cgctagaaat
     1921 attcaatggc attagtcata aaacagttaa atcattacgg aaacagttgt tgtatttaaa
     1981 agataaattt aaaaatatcg aacaaagttt aaaagctgga catactagtt tcatttcgat
     2041 taaaaattta tctcaaaaat caacaatacg tttatatgtg aaagattacg ctgtaaaaga
     2101 tgtattaacg aaacaagtat tggaaaaatt taaatcactc atttttatat ctggtacttt
     2161 aaaatttaat cattcgtttg aagcttttaa acagttattc aacaaagatg ttcactttaa
     2221 tacatttgaa gttaacacgt cgttacaaag tgcaaaaaat acaagtgtat ttataccgag
     2281 tgatgtagca tcttatcaat ataaaaatat agatgagtat gtagcatcga ttgtaagcta
     2341 tattattgaa tatacgacta taacgtcatc aaaatgttta gtcttattta cgagttataa
     2401 aatgatgcat atggtacaag atatgctaaa tgaattgcca gaatttgaag attatgttgt
     2461 attaacacaa cagcagaacc aaaattataa aatagtacaa cagtttaata attttgataa
     2521 ggccatactg cttggtacgt caacattttt tgaaggtttt gattttcaag caaatggtat
     2581 taaatgtgtg atgatagcga agttaccgtt tatgaacaag cataatgcaa aatattggct
     2641 tatggattct gaattcactt caactttcaa ggaatatgta ttacctgatg cagttacacg
     2701 ttttagacaa ggacttggaa gattaattag aaatgaaaat gatcgcggca taatagtttc
     2761 atttgatgat cgactcataa acagtaatta taaaaacttt tttgaacaaa cacttgaaaa
     2821 ttatcgtcag aaaaaaggcg acattcaaca gtttggaaaa ttattaagac aaattcaaaa
     2881 aaagaaaaag tgaaatacaa agtaaaattc ttgtgacatg acatgtgcta tgttctgtta
     2941 caagaatttt tgtttggtcg tcaaaatttg agttttataa ttaaacttga atgttagcac
     3001 aaaaaacgac cttcatacta ataatattga ggctttatta tatattttgt ctgaaactga
     3061 tgattgtatt gtcttaatat aaattaatgt tcaaatctgt gcgtaaatca ttaccattta
     3121 cacgttatct tttagtctag ttctagaact tgaaagcgga ttttgttaaa atgaatgagt
     3181 attgtataac gaaaaaataa ataggagaat ggttatgaaa acaacgatta aacaagcgaa
     3241 agatcattta aaccaagacg ttacaattgg tgcttggtta acaaataaac gttcaagtgg
     3301 taaaatcgcc tttttacaat tacgtgatgg aacaggcttt atgcaaggcg tagtagttaa
     3361 atcagaagtt gatgaagagg tattcaaact tgcgaaagaa attactcaag aatcatctct
     3421 atacgttaca ggcacaatta cagaagataa tcgttctgac ttaggatacg aaatgcaagt
     3481 gaaatcaatt gaagttattt cagaagcaca tgactatccg attacaccta aaaatcatgg
     3541 tacagaattc ttaatggatc accgtcattt atggttacgt tctaaaaaac aacatgctgt
     3601 aatgaaaatt agaaatgaag ttattcgtgc aacgtatgaa tttttcaaca aagatggatt
     3661 tacaaaggtt gatccaccaa ttttgacagc aagtgcgcca gaaggtacaa gtgaattatt
     3721 ccatactaaa tactttgatc aagatgcgtt tttatctcaa agtggtcagt tatacttaga
     3781 agctgcagca atggcacacg gaaaagtatt ttcatttggt ccaactttca gagctgaaaa
     3841 atcaaaaaca cgtagacact tgatcgagtt ctggatgatt gaaggagaaa tggctttcac
     3901 aaatcatgct gaaagtttag aaattcaaga acaatatgta acacatgttg taaaatcagt
     3961 tttagaaaat tgtaaactag agttgaaaat tttagagcgt gatacatcaa aacttgaaaa
     4021 agttgcgaca ccattcccta gaatttcata tgatgatgca attgaattct taaaagcaga
     4081 aggctttgat gatattgaat ggggcgaaga ttttggtgcg ccacatgaaa cagccattgc
     4141 taatcattat gatttaccgg tgtttattac taattatcca actaaaatta agcctttcta
     4201 tatgcaacca aatcctgaaa atgaagaaac tgtattatgt gcagacttaa ttgcacctga
     4261 aggatacggt gaaattattg gtggatctga acgtgtggat gacttagaat tgttagaaca
     4321 acgcgttaaa gaacatggat tagacgaaga agcatatagt tactacttag acttacgtcg
     4381 ttatggtagt gtgccacact gtggatttgg tttaggttta gagcgtacag tagcatggat
     4441 ttctggtgtt gaacacgttc gtgaaacagc gccattccca agattattaa accgtttata
     4501 tccataagtt ttagggtcgt tacttaaaat atatattatg ataataaaaa gaatcgtcc
//
LOCUS       DALPQQ010000152         4523 bp    DNA     linear   BCT 22-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus strain K18-6-464
            SAMD00233528-rid16434743.denovo.153, whole genome shotgun sequence.
ACCESSION   DALPQQ010000152 DALPQQ010000000
VERSION     DALPQQ010000152.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMD00233528
            Sequence Read Archive: DRR236061
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 4523)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4523)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001543423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001543423.1
            Genome Coverage       :: 77x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/22/2022 17:09:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,811
            CDSs (total)                      :: 2,743
            Genes (coding)                    :: 2,689
            CDSs (with protein)               :: 2,689
            Genes (RNA)                       :: 68
            rRNAs                             :: 2, 4, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 4, 2 (16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 54
            CDSs (without protein)            :: 54
            Pseudo Genes (ambiguous residues) :: 0 of 54
            Pseudo Genes (frameshifted)       :: 27 of 54
            Pseudo Genes (incomplete)         :: 27 of 54
            Pseudo Genes (internal stop)      :: 10 of 54
            Pseudo Genes (multiple problems)  :: 10 of 54
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4523
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMD00233528-rid16434743.denovo.153"
                     /strain="K18-6-464"
                     /db_xref="taxon:1280"
                     /geo_loc_name="Japan: Niigata"
     gene            complement(287..1933)
                     /locus_tag="O7798_002373"
     CDS             complement(287..1933)
                     /locus_tag="O7798_002373"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499874.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BCCT family transporter"
                     /protein_id="HDC2864572.1"
                     /translation="MNSSSPENPNGKKYSPVFIYSAIVVAIVVLLGAFLPEQFNYVTN
                     NIKMWITEKLGWYYLILTTIIVFFCIFLIFSPIGKLKLGKPNDKPEFNTISWFAMLFS
                     AGMGIGLVFYGAAEPMAHFATPPTADPKTTEAYTEALRSTFFHWGFHAWAVYGVVALA
                     LAYSQFRKGEPGLLSRTLRPLLGDKVEGPIGIFIDVLSVFATIVGVAVSLGMGALQIN
                     GGLHYLFNVPNNTFVQAIIIIVVTILFIASAWSGLSKGIQYLSNLNIGLGTILMVAAL
                     IVGPTVLILNMLTSSTGSLLNTFLFNSFDTAALNPQKREWMSSWTLYYWGWWLSWSPF
                     VGVFIARVSKGRSIREFISGVLLVPAIVSFVWFSVFGVLGIETGKKHKEIFDMTPETQ
                     LFGVFNHVPFGIVLSLIALLLIASFFITSADSATFVLGMQTTFGSLNPSSMVKVVWGI
                     SQALIAFVLLLAGGGNGAEALNAIQSAAIISAFPFSFVVILMMVSFYKDANQERKFLG
                     LTLTPNKHRLQEYIKSQQEDYESDILEKRQSRRNIEKKDN"
     gene            2137..2499
                     /gene="mscL"
                     /locus_tag="O7798_002374"
     CDS             2137..2499
                     /gene="mscL"
                     /locus_tag="O7798_002374"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_008530241.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="large conductance mechanosensitive channel
                     protein MscL"
                     /protein_id="HDC2864573.1"
                     /translation="MLKEFKEFALKGNVLDLAIAVVMGAAFNKIISSLVENIIMPLIG
                     KIFGSVDFAKEWSFWGIKYGLFIQSVIDFIIIAFALFIFVKIANTLMKKEEAEEEAVV
                     EENVVLLTEIRDLLREKK"
     gene            complement(2570..3439)
                     /locus_tag="O7798_002375"
     CDS             complement(2570..3439)
                     /locus_tag="O7798_002375"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001810626.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SMC family ATPase"
                     /protein_id="HDC2864574.1"
                     /translation="MEMSRLNLTDDNDIDEIIAWRGEQEELEQKRDTYKKRYHEFEME
                     IARLESLTKDKELLDSDKLKDEYELKKGKMNTLIDEYSAVHYQCQNNINKTQSIVSHI
                     NYLNQELKDQQEIFQLAEIVSGKNNKNLTLENFVLIYYLDQIIAQANLRLATMSDNRY
                     QLIRREAVSHGLSGLEIDVFDLHSNKSRHISSLSGGETFQSSLALALGLSEIVQQQSG
                     GISLESIFIDEGFGTLDQETLETALDTLLNLKSTGRMVGIISHVSELKNRIPLVLEVK
                     SDQYQSSTRFKRN"
BASE COUNT         1485 a          793 c          610 g         1635 t
ORIGIN      
        1 attgatttat gtcccagcct gagttaattt tctataaaag tatatttaat ttgcgtttat
       61 accgtcaaac ttcactttag ctttgtcaaa cccctttcta ttaagttttc agaaataaac
      121 ctatcttaaa atataaaaaa atcgagaatt cgtagtttaa taacgaaatt ctcgttctta
      181 tccttttgaa tatactcaat tttccacaaa aacaaacaag tagtatatct gttctagcta
      241 ctagaatgac atactacttg ttattaaaat acttaactaa actttattag ttatcttttt
      301 tctctatatt tctacgtgac tgacgctttt caagaatgtc agattcataa tcttcttgtt
      361 gactcttgat atattcttgt aagcgatgtt tattcggagt caatgttaaa cctaggaatt
      421 tacgttcctg gttcgcatcc ttgtagaaac ttaccatcat gagtatgacg acaaaggaga
      481 atgggaatgc acttataatt gcagcacttt gaatcgcatt taaagcttca gcgccgttac
      541 cgccaccagc taataaaagt acaaatgcta ttaaggcctg tgaaattccc caaacaactt
      601 ttaccatact agatggattt aatgaaccaa atgttgtttg cattcctaat acaaatgttg
      661 ctgagtcagc agatgtaata aagaatgatg caattaataa taatgcaatc aacgataaaa
      721 caatgccaaa tggcacatga ttaaacactc caaatagctg tgtttcagga gtcatatcaa
      781 aaatttcttt gtgtttctta cctgtctcga tgcctaatac accaaagaca ctaaaccaaa
      841 caaaactaac aattgctgga actagcaaga caccagaaat gaactctcta attgaacgtc
      901 cttttgaaac tcgtgcaata aacactccaa cgaatggact ccaacttaac caccaacccc
      961 agtaataaag tgtccatgaa gacatccatt cacgtttttg aggatttaaa gctgctgtat
     1021 caaaactatt aaacaagaat gtgtttagta aactacccgt agagctagtt aacatattta
     1081 aaataagaac agttggtcca acaattaaag cagctaccat taaaatagta cctaaaccaa
     1141 tgttcaagtt acttaagtat tgaatacctt tacttaatcc agaccatgca cttgctataa
     1201 ataagatagt aacaacaatg atgataatcg cttgtacaaa cgtattgttt ggaacattga
     1261 acaagtaatg taaaccacca ttaatttgta gagcacccat acctaacgaa acggctaccc
     1321 caacgattgt cgcaaataca gataaaacgt caataaaaat cccaatagga ccttctactt
     1381 tatcacctaa aagaggacgt aaagttctag ataataaacc tggttcacct ttacggaatt
     1441 gcgaatatgc caacgctaac gcaacaacac cataaacagc ccaagcatgg aatccccaat
     1501 ggaaaaatgt tgaacgtaga gcttcagtat aagcttcagt agttttggga tctgctgtag
     1561 gtggcgtagc aaagtgcgcc atcggttcag ctgcaccata aaacaccaaa cctatcccca
     1621 taccagcact aaacaacata gcaaaccatg aaattgtatt aaactcaggt ttgtcatttg
     1681 gtttacctag tttaagtttt ccaataggac taaaaataag gaatatacag aagaacacga
     1741 taatcgtagt aagaataaga taataccaac ctaacttttc tgtaatccac attttaatat
     1801 tattggtaac atagttgaat tgttcaggta aaaatgcacc aagtaatacg actatagcaa
     1861 caacaattgc actatagatg aagactggtg aatacttctt tccatttgga ttctctggtg
     1921 aagaagaatt cataattaat tactcccttc aattctatat ttaattttat gtagtagaat
     1981 aaaaatatta tctaaacatt ttattcaata actcacgcac ctttatagga taacaaaggt
     2041 ctttgcgata atcaaatttt cttgaataat ctattttcta atttttttat ttgttgtata
     2101 attgaggtta catttaaaaa agagaggttg agtgtaatgt taaaagaatt caaagagttc
     2161 gccttaaaag gtaacgtctt agatttagca attgctgttg tgatgggtgc agctttcaac
     2221 aagattatat cttcattagt agaaaatatc attatgccat taattggtaa aattttcgga
     2281 tcagttgatt ttgctaaaga atggtcattc tggggtatta aatacggttt atttatccaa
     2341 tctgttatcg actttattat catcgcgttt gctttattca tctttgttaa gattgcaaat
     2401 acattaatga agaaagaaga agccgaagaa gaagcagttg tggaagaaaa tgttgtgtta
     2461 ttaactgaaa tcagagattt attacgtgag aaaaaataat ttttaaataa aaagagatgg
     2521 gctaaggttg ttctatacat tccaaagtac catctctatt ttttatgttt taatttcttt
     2581 tgaatcttgt tgaactctga tattgatctg atttcacttc taaaactaaa ggtattctat
     2641 ttttcaattc gctcacatgt gaaataatcc caaccattct accagttgat ttaagattta
     2701 ataaagtgtc taacgctgtt tcaagcgttt cttgatctaa tgtaccgaat ccttcatcaa
     2761 taaatattga ttctagtgaa atacctcctg attgctgctg tacaatttcg cttaacccta
     2821 aagctaatgc aagcgacgat tggaaagttt ctccacctga taacgagcta atatgtctag
     2881 acttatttga atgcaaatca aatacatcaa tttctaggcc actaagacca tgagaaaccg
     2941 cttctcgcct aattagttgg tatcgattat ctgacattgt tgctaatctc agatttgctt
     3001 gagcaataat ttgatctaaa tagtaaatta agacaaagtt ttccaatgta agatttttgt
     3061 tattcttacc actgacaatt tcagccaatt gaaatatttc ttgttgatcc tttaattctt
     3121 gatttaagta attaatatgc gaaactatag attgtgtttt attaatatta ttttgacatt
     3181 gataatgaac agcagagtat tcatctatca gtgtattcat ctttcctttt tttagctcat
     3241 attcatcttt taatttatca gagtccaata actctttatc cttagttaat gattctaacc
     3301 tagctatttc catttcaaat tcatgataac gttttttata agtatccctt ttctgctcta
     3361 attcctcttg ctcgcccctc caggctatta tttcatctat atcattgtca tcagttaaat
     3421 tcagcctcga catttccatt tcaatagact gttcattcaa ttctaagtca ttattgtaag
     3481 tttctagttg attttcataa tgatttagat tattttgctc aattaacttt ctttgagaca
     3541 attgcattaa cttatcttca atctcctttg agagttcttg atgctgattc acatcttgaa
     3601 catacttctt ataatccacc tcaaaattag tgatattatt atatttcgag agtgtttcaa
     3661 attcagtgat gagatctcga cataatttca actcagattc atttttattt agacgcaatt
     3721 gtttattatg aatttgcaac gttagattat ctttttcttc tttcatttgt tctataaatt
     3781 tattaagatc tctttgatta ttcaatgcat tttcattttc tagcagacgc ttattcaata
     3841 cttcaagtga aaaatcactt tgcgttttaa tattaatatt cgatattttt tcattaacaa
     3901 atttaatttc agaattatgc acagcaatat tcgattttat agcgtggata tttgcttcaa
     3961 tttctttaat ttcattttga cgtttagcaa tactgtcaaa atcaatatga tgccctaaat
     4021 cctgaatttc attaccacat atcggacatt gatctccaat atttacagca gatttaattt
     4081 cacttataaa gctttcttta tcatttaagt ccaattttgt tttatcgtag cgatctaatt
     4141 ttatttcgag attcttcaat atagatgttt cttcattaat ttgattctct aactcttgct
     4201 tactacctaa tagtttatct aattcagctt tagctttttc attttcttta attatattaa
     4261 tttcattatt tatgttcgtt atcgtattat ttagttcgat aattttctcg taatcacttt
     4321 ggttattacc tattgaatct tcgaccgttt ctaaaccttt aattagatca tttaattcat
     4381 cacctaattg ttcaccctca gttctcaagc gttcaatatt gagataactt tgttgatact
     4441 tattaatatc gttaaataat actctagttt tatcaataaa agagatttta ctttcaatta
     4501 aatctccatt ttcttctaac att
//
LOCUS       DALPQQ010000153         4413 bp    DNA     linear   BCT 22-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus strain K18-6-464
            SAMD00233528-rid16434743.denovo.154, whole genome shotgun sequence.
ACCESSION   DALPQQ010000153 DALPQQ010000000
VERSION     DALPQQ010000153.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMD00233528
            Sequence Read Archive: DRR236061
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 4413)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4413)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001543423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001543423.1
            Genome Coverage       :: 77x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/22/2022 17:09:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,811
            CDSs (total)                      :: 2,743
            Genes (coding)                    :: 2,689
            CDSs (with protein)               :: 2,689
            Genes (RNA)                       :: 68
            rRNAs                             :: 2, 4, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 4, 2 (16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 54
            CDSs (without protein)            :: 54
            Pseudo Genes (ambiguous residues) :: 0 of 54
            Pseudo Genes (frameshifted)       :: 27 of 54
            Pseudo Genes (incomplete)         :: 27 of 54
            Pseudo Genes (internal stop)      :: 10 of 54
            Pseudo Genes (multiple problems)  :: 10 of 54
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4413
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMD00233528-rid16434743.denovo.154"
                     /strain="K18-6-464"
                     /db_xref="taxon:1280"
                     /geo_loc_name="Japan: Niigata"
     gene            complement(232..2841)
                     /gene="adhE"
                     /locus_tag="O7798_002376"
                     /gene_synonym="adhC"
     CDS             complement(232..2841)
                     /gene="adhE"
                     /locus_tag="O7798_002376"
                     /gene_synonym="adhC"
                     /EC_number="1.1.1.1"
                     /EC_number="1.2.1.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498713.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional acetaldehyde-CoA/alcohol
                     dehydrogenase"
                     /protein_id="HDC2864575.1"
                     /translation="MLTIPEKENRGSKEQEVAIMIDALADKGKKALEALSKKSQEEID
                     HIVHQMSLAAVDQHMVLAKLAHEETGRGIYEDKAIKNLYASEYIWNSIKDNKTVGIIG
                     EDKEKGLTYVAEPIGVICGVTPTTNPTSTTIFKAMIAIKTGNPIIFAFHPSAQESSKR
                     AAEVVLEAAMKAGAPKDIIQWIEVPSIEATKQLMNHKGIALVLATGGSGMVKSAYSTG
                     KPALGVGPGNVPSYIEKTAHIKRAVNDIIGSKTFDNGMICASEQVVVIDKEIYKDVTN
                     EFKAHQAYFVKKDELQRLENAIMNEQKTGIKPDIVGKSAVEIAELAGIPVPENTKLII
                     AEISGVGSDYPLSREKLSPVLALVKAQSTKQAFQICEDTLHFGGLGHTAVIHTEDETL
                     QKDFGLRMKACRVLVNTPSAVGGIGDMYNELIPSLTLGCGSYGRNSISHNVSATDLLN
                     IKTIAKRRNNTQIFKVPAQIYFEENAIMSLTTMDKIEKVMIVCDPGMVEFGYTKTVEN
                     VLRQKTEQPQIKIFSEVEPNPSTNTVYKGLEMMVDFQPDTIIALGGGSAMDAAKAMWM
                     FFERPETSFFGAKQKFLDIGKRTYKIGMPENATFICIPTTSGTGSEVTPFAVITDSET
                     NVKYPLADFALTPDVAIIDPQFVMSVPKSVTADTGMDVLTHAMESYVSVMASDYTRGL
                     SLQAIKLTFEYLKSSVEKGDKVSREKMHNASTLAGMAFANAFLGIAHSIAHKIGGEYG
                     IPHGRANAILLPHIIRYNAKDPQKHALFPKYEFFRADTDYADIAKFLGLKGNTTEALV
                     ESLAKAVYELGQSVGIEMNLKSQGVSEEELNESIDRMAELAFEDQCTTANPKEALISE
                     IKDIIQTSYDYKQ"
     gene            complement(3291..3775)
                     /gene="tnpA"
                     /locus_tag="O7798_002377"
                     /pseudo
     CDS             complement(3291..3775)
                     /gene="tnpA"
                     /locus_tag="O7798_002377"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500412.1"
                     /note="frameshifted; internal stop; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS200/IS605 family transposase"
     gene            complement(4165..4380)
                     /locus_tag="O7798_002378"
     CDS             complement(4165..4380)
                     /locus_tag="O7798_002378"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000905717.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDC2864576.1"
                     /translation="MLIKIRGGNMKRDFFEKWSFILNLILFCAFLFLVVLMFYKDVDL
                     IYIFCTLLISLLPLLNIIKRYKKKTDN"
BASE COUNT         1307 a          833 c          640 g         1633 t
ORIGIN      
        1 tatttatatg aaattaaaaa taattatact ctaaagtagt aatagtttgt gaaatgagta
       61 tcaatcttaa tattttcttt atttaaaaaa atgattgtct agtttgtatc tctctgaaga
      121 tttggcaata aataaaagcc gataaccgta taatgattat cgacttaaag tttatgtggc
      181 attttttact tttgtaattt caggtgagtt agatgattat tatcagatag attattgctt
      241 ataatcatat gatgtttgaa tgatatcttt gatttcactg attagtgctt ctttaggatt
      301 agcagttgta cattgatctt caaatgcgag ctctgccatt ctatcaattg actcatttaa
      361 ttcttcttca gacacacctt gtgatttcaa attcatttca attccgactg attgacctaa
      421 ttcgtagaca gctttagcta atgattctac gagtgcttct gtcgtattac cttttaatcc
      481 taagaatttg gcaatatctg cataatctgt atctgctctg aagaactcat atttagggaa
      541 taatgcatgt ttttgcgggt ctttggcatt ataacggata atatgcggta gtaatatcgc
      601 attcgctcta ccatgcggaa taccatattc gccaccaatt ttatgcgcaa ttgagtgtgc
      661 aatgcctaag aatgcatttg caaatgccat accagccaaa gttgatgcgt tatgcatttt
      721 ctctcttgaa actttatcac ccttttcaac agatgatttt aaatattcga acgtcaattt
      781 aatcgcttgt agactcaaac ctcttgtgta gtctgaagcc attacagata catatgattc
      841 cattgcatgc gttagtacat ccattcctgt atctgctgta acgctttttg gcacactcat
      901 cacaaattga gggtcaataa ttgcaacgtc aggtgttaaa gcaaaatcag ccaacggata
      961 ttttacattt gtttcactat ctgtgataac tgcaaatggt gttacttctg aacctgtacc
     1021 tgatgtcgta gggatacaaa tgaacgtcgc attttcaggc atgcctattt tataagtacg
     1081 tttaccgatg tctaggaact tttgtttagc accgaagaat gatgtctcag ggcgttcaaa
     1141 gaacatccac attgcttttg cagcatccat cgctgaacca ccaccaagtg caatgattgt
     1201 atccggttgg aaatcaacca tcatttccag acctttatat actgtattag ttgatgggtt
     1261 cggttcgact tcgctaaata ttttaatttg aggctgttcc gttttttgtc ttaatacatt
     1321 ctcaactgtt tttgtataac cgaattctac cataccaggg tcacagacaa tcatcacttt
     1381 ttcaatcttg tccattgttg ttagactcat gattgcattt tcttcaaaat aaatttgagc
     1441 aggcaccttg aaaatttgag tattattacg tcgtttagca atcgttttaa tgtttaataa
     1501 atctgtcgca ctaacattat gtgaaattga gtttctaccg taggaaccac aacctaatgt
     1561 taaagacgga atcaattcgt tatacatatc accaatacct ccaaccgctg atggtgtatt
     1621 tacaagtaca cgacaagctt tcattcttag tccaaaatct ttttgtaatg tttcatcttc
     1681 tgtatggata acggctgtgt gtcctaatcc accaaaatgt agtgtgtctt cacaaatttg
     1741 aaatgcttgt tttgtagatt gggcttttac taaggctaat actggagata atttttcacg
     1801 agataacgga tagtctgaac ctacaccgct aatttcggct atgataagtt ttgtattttc
     1861 ggggacaggt atacctgcta attcagctat ttcaactgca gatttaccga caatatcagg
     1921 cttaatacct gttttttgtt cattcataat tgcattttct aagcgttgta attcatcttt
     1981 tttaacaaag tatgcttgat gtgctttaaa ttcattagta acatctttat aaatttcttt
     2041 atcaatgact acaacttgtt cagaagcaca aatcatacca ttatcaaatg tttttgaacc
     2101 aatgatatca tttactgcac gtttaatgtg tgctgttttt tcaatgtaag acggcacgtt
     2161 acctggtccc acacctaatg ccggtttgcc agttgaatat gcagacttaa ccatgcccga
     2221 accacctgtt gctagaacta atgcaatacc tttgtgattc attaattgtt ttgttgcttc
     2281 gatagaaggc acttcaatcc actgaataat atctttaggt gcacctgcct tcattgccgc
     2341 ttctaataca acttctgctg cacgcttcga cgattcttgt gcacttggat ggaatgcaaa
     2401 aatgattgga tttcctgtct taattgcaat catcgcttta aaaatagttg tcgacgtagg
     2461 atttgttgtt ggcgtaacac cacaaataac accaattggt tccgctacat acgttaatcc
     2521 tttttcttta tcttcaccaa taatccctac tgtcttattg tcttttattg aattccatat
     2581 atattcagaa gcgtataaat ttttaatcgc tttatcttcg tatatacctc ttccagtttc
     2641 ttcatgtgct aattttgcta gcaccatatg ttgatcaaca gctgctaagc tcatttgatg
     2701 aacaatatga tcaatttctt cttgtgactt tttagataat gcttctaatg cttttttccc
     2761 tttgtcagct agagcatcaa tcataattgc cacttcttgt tctttcgatc cacgattttc
     2821 tttttcaggt atagttaaca tatacaacca ctcctttata ctttgtgaat tatttcacaa
     2881 acattatagt acatgtctct caggatataa agaaaattct atacaaaaaa gtttaatttc
     2941 gaatattatt tgaacaaata tcaaatttta aaataaatgt tttcatgaaa tcattgttat
     3001 ttcggtgttt ttagaatgat tttataatca taattttttc aatgacataa tttattcata
     3061 attatatatt taattctgaa tattctttaa tagcctaaaa agcttgttat atcgcacaaa
     3121 acacaacatt aaaaggtcct tgtcgatacc tatcaacaga tgttacaaat aaaaaccacc
     3181 cgtgtgaacg ggtggtttgt tctgcggcta taagccttcc ttactggcca gccctaaaag
     3241 ggcactgaca agtcagccaa ctgcactact attccagcaa tcctaaaggt ttactctttt
     3301 ttctttcttt ttttattttt ctctccagtg aaaggatcta aatattcttc cattgaaatt
     3361 tcatctgcaa cgatatcctc ttgtaattga ttacgaatat aattttcaat cactttttta
     3421 tttctaccta ctgtatccac ataaaatcct ttacaccaaa actttctatt tccatatcta
     3481 tactttaagt tagcatgtct atcaaatatc attaaattac ttttcctttt aaatagccaa
     3541 caaatgatga taccccaagt ttgggtggta tacttactaa catatggata tgatctttac
     3601 atacctctgc ttcaattatc tctacacctt ttctttcata taattgacgt aatataatcc
     3661 ctatatcttt ttttattttt ccatatatcg cttgtcttct gtatttaggt gcaaagacaa
     3721 tatgttactt acaattccat ttcgtatgtg ctaaactgtt tgtgtcagat gacattaaat
     3781 agcatctcct cgtgttgatt attttggttg gctgaccaat atttactcta acatgtagag
     3841 atgcattttt ttgacaatgg tagaaccttt tctggggagt gggacagaaa tgatattttc
     3901 gcaaaattta tttcgccgtc ccaccccaac ttgcattgtc tgtagaaatt gggaatccaa
     3961 tttctctttg ttggggcccc gccccaactc gcattgcctg tagaatttct tttcgaaatt
     4021 ctctgtgttg gggcccctga ctagaattga aaaaagctta ttacaagcgc attttcgttc
     4081 agtcaattac tgccaatata acttcgtaga tcatagaaca ttgatttatt tcccagccta
     4141 ttcttttcat aaaaaaaaga cggattaatt atccgtcttt ttcttatatc tttttataat
     4201 atttagcaaa ggtaataatg atattaataa tgtacaaaaa atataaatca aatcgacatc
     4261 cttataaaac atcagaacca ctaaaaacaa aaaagcacaa aataaaatta aatttaaaat
     4321 aaacgaccac ttttcaaaaa aatctctttt catatttcca cccctaattt taataagcat
     4381 tattttatat tctcttttaa gtttattatt caa
//
LOCUS       DALPQQ010000154         4376 bp    DNA     linear   BCT 22-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus strain K18-6-464
            SAMD00233528-rid16434743.denovo.155, whole genome shotgun sequence.
ACCESSION   DALPQQ010000154 DALPQQ010000000
VERSION     DALPQQ010000154.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMD00233528
            Sequence Read Archive: DRR236061
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 4376)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4376)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001543423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001543423.1
            Genome Coverage       :: 77x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/22/2022 17:09:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,811
            CDSs (total)                      :: 2,743
            Genes (coding)                    :: 2,689
            CDSs (with protein)               :: 2,689
            Genes (RNA)                       :: 68
            rRNAs                             :: 2, 4, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 4, 2 (16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 54
            CDSs (without protein)            :: 54
            Pseudo Genes (ambiguous residues) :: 0 of 54
            Pseudo Genes (frameshifted)       :: 27 of 54
            Pseudo Genes (incomplete)         :: 27 of 54
            Pseudo Genes (internal stop)      :: 10 of 54
            Pseudo Genes (multiple problems)  :: 10 of 54
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4376
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMD00233528-rid16434743.denovo.155"
                     /strain="K18-6-464"
                     /db_xref="taxon:1280"
                     /geo_loc_name="Japan: Niigata"
     gene            57..1238
                     /locus_tag="O7798_002379"
     CDS             57..1238
                     /locus_tag="O7798_002379"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500379.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HDC2864577.1"
                     /translation="MNIPKSVWWLVIGMALNITGSSFLWPLNTIYMKQELGKSLTVAG
                     LVLMINSFGMVIGNLLGGSLFDKLGGYKTILIGTFTCLCSTTLLNFFHGWPWYAVWLV
                     MLGFGGGMIIPAIYAMAGAVWPNGGRQTFNAIYLAQNIGVAVGAAMGGFVAEFSFNYI
                     FLANLIMYVVFALVAVTQFNIEINAKVKYPTHLDITGKKNKARFISLVLICAMFAICW
                     VAYIQWESTIASFTQSINISMAQYSVLWTINGIMILVAQPLIKPILYLLKGNLKKQMF
                     VGIIIFMLSFFVTSFAENFTIFVVGMIILTFGEMFVWPAVPTIANQLAPDGKQGQYQG
                     FVNSAATVGKAFGPFLGGVLVDAFNMRMMFIGMMLLLVFALILLMVFKENNTQPKKID
                     A"
     gene            1526..3943
                     /locus_tag="O7798_002380"
     CDS             1526..3943
                     /locus_tag="O7798_002380"
                     /EC_number="6.1.1.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500378.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="leucine--tRNA ligase"
                     /protein_id="HDC2864578.1"
                     /translation="MLNYNHNQIEKKWQDYWDENKTFKTNDNLGQKKFYALDMFPYPS
                     GAGLHVGHPEGYTATDIISRYKRMQGYNVLHPMGWDAFGLPAEQYALDTGNDPREFTK
                     KNIQTFKRQIKELGFSYDWDREVNTTDPEYYKWTQWIFIQLYNKGLAYVDEVAVNWCP
                     ALGTVLSNEEVIDGVSERGGHPVYRKPMKQWVLKITEYADQLLADLDDLDWPESLKDM
                     QRNWIGRSEGAKVSFDVDNTEGKVEVFTTRPDTIYGASFLVLSPEHALVNSITTDEYK
                     EKVKAYQTEASKKSDLERTDLAKDKSGVFTGAYATNPLSGEKVQIWIADYVLSTYGTG
                     AIMAVSAHDDRDYEFAKKFDLPIIEVIEGGNVEEAAYTGEGKHINSGELDGLENEAAI
                     TKAIQLLEQKGAGEKKVNYKLRDWLFSRQRYWGEPIPVIHWEDGTMTTVPEEELPLLL
                     PETDEIKPSGTGESPLANIDSFVNVVDEKTGMKGRRETNTMPQWAGSCWYYLRYIDPK
                     NENMLADPEKLKHWLPVDLYIGGVEHAVLHLLYARFWHKVLYDLGIVPTKEPFQKLFN
                     QGMILGEGNEKMSKSKGNVINPDDIVQSHGADTLRLYEMFMGPLDAAIAWSEKGLDGS
                     RRFLDRVWRLMVNEDGTLSSKIVTTNNKSLDKVYNQTVKKVTEDFETLGFNTAISQLM
                     VFINECYKVDEVYKPYIEGFVKMLAPIAPHIGEELWSKLGHEESITYQPWPTYDEALL
                     VDDEVEIVVQVNGKLRAKIKIAKDTSKEEMQEIALSNDNVKASIEGKDIMKVIAVPQK
                     LVNIVAK"
     gene            3965..4276
                     /locus_tag="O7798_002381"
     CDS             3965..4276
                     /locus_tag="O7798_002381"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500377.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rhodanese-like domain-containing protein"
                     /protein_id="HDC2864579.1"
                     /translation="MKSITTDELKNKLLESKPVQIVDVRTDEETAMGYIPNAKLIPMD
                     TIPDNLNSFNKNEIYYIVCAGGVRSAKVVEYLEANGIDAVNVEGGMHAWGDEGLEIKS
                     I"
BASE COUNT         1504 a          578 c          899 g         1395 t
ORIGIN      
        1 tttaatgtta tagtgtttat tatagtttga caaaaaagag agaggaacta tgaaatatga
       61 atatacctaa atcagtctgg tggctagtaa ttggcatggc gttaaatatt actggttcca
      121 gttttttgtg gcctttaaat acaatttata tgaaacaaga acttggaaaa agtttaactg
      181 ttgctggttt agtgctaatg ataaattcat ttggcatggt tattggaaac ttattaggtg
      241 gttcactatt tgataaatta ggtggataca agacgatttt aattggaact ttcacttgtc
      301 tttgtagtac aacgctactt aatttctttc acgggtggcc ttggtatgct gtatggcttg
      361 taatgttagg gtttggtggc ggaatgatta ttcctgcgat atacgctatg gctggagcag
      421 tgtggccaaa tggcggaaga caaacgttta atgcgatata cttagcgcaa aatattggtg
      481 tggctgtcgg tgctgcaatg ggcggctttg tcgcagaatt tagctttaac tatatctttt
      541 tagccaatct tattatgtat gttgtgtttg cgcttgtcgc ggtaacgcaa tttaatattg
      601 aaattaatgc gaaagttaaa tatccaactc atttagatat tactggtaaa aagaataaag
      661 caagatttat ttcattagta ctaatttgtg caatgtttgc aatttgttgg gttgcatata
      721 ttcaatggga gtctacaatc gcttcattta cacaatctat taatatttca atggcacaat
      781 atagtgtttt atggacaatt aacggaataa tgattttagt agcacaacca ttaattaaac
      841 cgattctcta tctgttaaaa ggaaacttaa agaagcaaat gtttgtcggc atcatcattt
      901 ttatgttgtc gttctttgtc acgagttttg ccgaaaactt tacaatattt gttgtcggta
      961 tgattatttt aacttttgga gaaatgtttg tatggccagc agttccaact atagccaatc
     1021 agttagcgcc agatggtaag caaggacagt accaaggttt tgtgaattca gctgctacag
     1081 taggaaaagc atttggtcca tttcttggtg gtgtattagt tgatgcgttt aatatgcgca
     1141 tgatgtttat cggtatgatg ctactacttg tatttgcatt aatattatta atggttttca
     1201 aggagaataa tacgcaacct aaaaaaatag atgcataatg agtaaataga attaacgtta
     1261 tagacttgaa ataaatgtcg ttataacata atattaattt gtataattta atttcgtttg
     1321 gagcttttct acagaaagct agtgatgctg agagctagtg ttaaggacta aatgtaaatc
     1381 gtattaattt taaattgaat gaatgacatc tcttactatt aaaatgagtg cacaattttt
     1441 gtgaaatagg gtggtaacgc ggcaaatgtc gtccctatgt aaatagaata gttagaggtg
     1501 tcttttttat tgaataggag gaaatgtgtt gaattacaac cacaatcaaa ttgaaaagaa
     1561 atggcaagac tattgggacg aaaataaaac atttaaaaca aatgataact taggtcaaaa
     1621 gaaattttat gctttagaca tgtttccata tccatcaggt gctggtttac atgttggaca
     1681 tcctgagggc tatacagcaa cagatatcat ttcaagatat aaaagaatgc aaggatataa
     1741 tgtattacat ccgatggggt gggatgcatt cggattacca gcagagcaat atgctttaga
     1801 cactggcaac gacccacgtg aatttacaaa gaaaaatatc caaactttta aacgacaaat
     1861 taaagaatta gggttcagtt atgattggga tcgtgaagtt aatacaacag atccagaata
     1921 ctataaatgg acacagtgga ttttcataca gttatataac aaaggtttag catacgttga
     1981 tgaagttgca gttaactggt gtccagcatt aggcactgtt ttatctaacg aagaagtgat
     2041 tgatggtgtc tctgaacgtg gtggacatcc agtttatcgt aagccgatga aacaatgggt
     2101 acttaaaatc acagaatatg cagatcaatt attagcagat ttagatgatt tagattggcc
     2161 tgagtcttta aaagatatgc agcgcaattg gattggacgt tctgaaggag ccaaagtttc
     2221 atttgatgta gataatacgg aaggaaaagt agaagtattt acgactagac cagatacaat
     2281 ctatggtgca tcattcttag tcttaagtcc tgaacatgca ttagttaatt caattacaac
     2341 agatgaatat aaagaaaaag taaaagctta tcaaacagaa gcttctaaaa agtcagattt
     2401 agaacgtaca gatttagcaa aagataaatc aggtgtattt actggtgcat atgcaactaa
     2461 tcctttatct ggtgaaaaag tacaaatttg gattgctgat tatgtattat caacatatgg
     2521 tactggagca attatggcag tatcagcgca tgatgacaga gattatgaat ttgctaaaaa
     2581 gtttgatttg ccaatcattg aagtcatcga aggtggaaat gttgaagaag cagcatacac
     2641 tggtgaaggt aaacatatta attctggtga acttgatggt ttagaaaatg aagcggcaat
     2701 tactaaagct attcaattat tagagcaaaa aggtgctggc gaaaagaaag ttaattacaa
     2761 attaagagat tggttattca gtcgtcagcg ttattggggc gaaccaattc ctgtcattca
     2821 ttgggaagat ggaacaatga caactgttcc tgaagaagag ctaccattgt tgttacctga
     2881 aacagatgaa atcaagccat cagggactgg tgagtctcca ctagctaata ttgattcatt
     2941 tgtaaatgtt gtagatgaaa aaacaggtat gaaaggacgt cgtgaaacaa atacaatgcc
     3001 acaatgggca ggtagttgtt ggtattattt acgttacatc gatcctaaaa atgaaaatat
     3061 gttagcagat cctgaaaaat taaaacattg gttacctgtt gatttatata tcggtggagt
     3121 agaacatgcg gttcttcact tattatatgc aagattttgg cataaagtcc tttatgattt
     3181 gggtatcgta cctactaaag aacctttcca aaaattattt aaccaaggta tgattttagg
     3241 agaaggtaat gagaagatga gtaaatctaa aggaaatgta atcaatcctg atgatatagt
     3301 acagtctcat ggtgcagata ctttgcgtct ttacgaaatg tttatgggac ctttagatgc
     3361 tgcaattgca tggagtgaaa aaggattaga tgggtctcgt cgattcttag atcgcgtatg
     3421 gcgtttaatg gtaaatgaag atgggacatt gagttcaaaa attgtaacta caaataataa
     3481 atctttagat aaagtttata accaaactgt taaaaaggta acagaagact ttgaaacatt
     3541 aggatttaat actgctatta gtcaattaat ggtatttatt aatgagtgtt ataaagttga
     3601 tgaagtttat aaaccttaca ttgaaggctt cgttaaaatg ttagcaccta ttgcaccaca
     3661 tatcggtgaa gaattatggt caaaattagg acatgaagag tctattacgt accaaccttg
     3721 gccaacttat gacgaagcac tacttgtaga tgatgaagta gaaatcgttg ttcaagtgaa
     3781 tggtaaattg agagctaaaa ttaaaattgc taaagataca tcaaaagaag aaatgcaaga
     3841 aattgcctta tctaatgaca atgttaaagc gagtattgaa ggtaaagaca tcatgaaagt
     3901 catcgctgtt cctcaaaaat tagtcaatat tgtagctaaa taatgtttta aggaggactt
     3961 tgaaatgaag tcaattacta cagatgaatt aaaaaataaa cttttagaat ctaaaccagt
     4021 tcaaattgtt gatgttcgta ctgatgaaga aacagcaatg ggatatattc ctaatgcaaa
     4081 gttaattcca atggatacca ttccggataa tttaaattca tttaataaaa atgaaatata
     4141 ttatattgta tgtgctggtg gagttcgaag cgctaaagtt gtagaatatt tagaggcaaa
     4201 tggcattgat gccgtaaatg tcgaaggcgg catgcacgca tggggcgatg aaggtttgga
     4261 aataaaaagt atttaaagta gtgacataat ttaaaataat attacatttg taatgacacc
     4321 aagtaacgtt tcggttgctt ggtgtttttt ggtatgaatt actttctgtt acaaaa
//
LOCUS       DALPQQ010000155         4344 bp    DNA     linear   BCT 22-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus strain K18-6-464
            SAMD00233528-rid16434743.denovo.156, whole genome shotgun sequence.
ACCESSION   DALPQQ010000155 DALPQQ010000000
VERSION     DALPQQ010000155.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMD00233528
            Sequence Read Archive: DRR236061
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 4344)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4344)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001543423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001543423.1
            Genome Coverage       :: 77x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/22/2022 17:09:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,811
            CDSs (total)                      :: 2,743
            Genes (coding)                    :: 2,689
            CDSs (with protein)               :: 2,689
            Genes (RNA)                       :: 68
            rRNAs                             :: 2, 4, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 4, 2 (16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 54
            CDSs (without protein)            :: 54
            Pseudo Genes (ambiguous residues) :: 0 of 54
            Pseudo Genes (frameshifted)       :: 27 of 54
            Pseudo Genes (incomplete)         :: 27 of 54
            Pseudo Genes (internal stop)      :: 10 of 54
            Pseudo Genes (multiple problems)  :: 10 of 54
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4344
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMD00233528-rid16434743.denovo.156"
                     /strain="K18-6-464"
                     /db_xref="taxon:1280"
                     /geo_loc_name="Japan: Niigata"
     gene            <1..322
                     /gene="lpl5"
                     /locus_tag="O7798_002382"
     CDS             <1..322
                     /gene="lpl5"
                     /locus_tag="O7798_002382"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000835992.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="tandem-type lipoprotein Lpl5"
                     /protein_id="HDC2864580.1"
                     /translation="RIENFKFFGQYANFKDLENYNNGDVSINWNVPSYDVEYKMSNKD
                     ENVKQLRSRYNIPTDKAPMLKMHIDGDLKGSSVGYKRLEIDFSKEGRDISVIDYLSYK
                     PAKK"
     gene            354..1145
                     /gene="lpl6"
                     /locus_tag="O7798_002383"
     CDS             354..1145
                     /gene="lpl6"
                     /locus_tag="O7798_002383"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000456139.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tandem-type lipoprotein Lpl6"
                     /protein_id="HDC2864581.1"
                     /translation="MEYLKRLALLISVIILTIFIMGCDSQSDTAENPKEGSKEAQIKK
                     SFSKTLDMYPIKNLEDFYDKEGYRDGEFKKDDKGTWLIRSEIVKQPKGKVMKTRGMQL
                     YINRNTETAKGFFVLKEISENNNRVNKDKEEKYEVKMVGNKIIPTEQINDEKIKKEIE
                     NFKFFVQYGNFKNFEKYNNGEFSYNPEAPIYSAKYQLHNDDYNVRQLRKRYDISTKET
                     PKLLLKGGGDLKNSSVGQNDIEFTFVERKGENIYFNDSVEFIPSK"
     gene            1215..1991
                     /gene="lpl7"
                     /locus_tag="O7798_002384"
     CDS             1215..1991
                     /gene="lpl7"
                     /locus_tag="O7798_002384"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498990.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tandem-type lipoprotein Lpl7"
                     /protein_id="HDC2864582.1"
                     /translation="MKCFQKLYIFILILIVLMAGCESNKITGDSKETQIKKSFAKTLD
                     VYPTKNLEDFYDKEGYRDGEFKKGDKGKWVIRSEMTTELKNENMVSKGMVIRLNRNSR
                     TCTGEYFVRIVKEDSEGKVYSDERKYPVKMENNKIITLKPIDDEKVKKEIEEFKFFVQ
                     YGNFKELENYKDGEVTYNPEAPIYSAQYQLKNSDYNVEQLRKRYNITTKKAPKLLLKG
                     SGNLKGSSVGYKNIEFTFVENKEENIYFTDSINFNPSEDK"
     gene            2170..2982
                     /gene="lpl8"
                     /locus_tag="O7798_002385"
     CDS             2170..2982
                     /gene="lpl8"
                     /locus_tag="O7798_002385"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001797296.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tandem-type lipoprotein Lpl8"
                     /protein_id="HDC2864583.1"
                     /translation="MGYIKRMALYMSVFLLIIFIVGCRNMKDEQKKEEQTNKTDSKEE
                     QIKKSFEKTLDMYPIKNLEELYDKEGYRDGEFKKGDKGMWTIYTDFAKSNKQGGLSNE
                     GMVLYLDRNTRTAKGHYFVKTFYNKGKFPDRKNYKVEMKNNKIILLDKVEDTNLKKRI
                     ENFKFFGQYANLKELKNYNNGDVSINENVPSYDAKFKMSNKDENVKQLRSRYNIPTDK
                     APVLKMHIDGNLKGSSVGYKKLEIDFSKGGKSDLSVIDSLNFQPAKVDEDDE"
     gene            3001..3786
                     /gene="lpl9"
                     /locus_tag="O7798_002386"
     CDS             3001..3786
                     /gene="lpl9"
                     /locus_tag="O7798_002386"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498990.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tandem-type lipoprotein Lpl9"
                     /protein_id="HDC2864584.1"
                     /translation="MKSIKRIGLCISLLILIIFVTSCDGDNKIIGDSKEEQIKKSFAK
                     TLDIYPIKNLEDLYDKEGYRDGEFKKDDKGTWLIRSEMKIQLKGENLESRGAVLEINR
                     NTRTAKGHYIVREVVEDSDGMTHNHTKRYPVKMENNKMIPLKPIDDEKVKKEIEEFNF
                     FVQYGNFKELENYKEDEVSYNPEVPIYSAKYQLKNSDYNVEQLRKRYNIPTQKAPKLL
                     LKGSGNLKGSSVGYKNIEFTFIENKEENIYFTDSIYFNPSEDK"
     gene            3969..>4344
                     /gene="lpl10"
                     /locus_tag="O7798_002387"
     CDS             3969..>4344
                     /gene="lpl10"
                     /locus_tag="O7798_002387"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001801842.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tandem-type lipoprotein Lpl10"
                     /protein_id="HDC2864585.1"
                     /translation="MEYIKKIALYMSVLLLIIFIGGCGNMKDEQKKEEQTNKTDSKEE
                     QIKKSFAKTLDMYPIKNLEDLYDKEGYRDGEFKKGDKGTWTILTGFSKSNKPGVLDDE
                     GMVLYLNRNTKKATGYYFVNKVY"
BASE COUNT         1875 a          439 c          812 g         1218 t
ORIGIN      
        1 gagaatagaa aactttaaat ttttcggaca atatgcaaat tttaaggatt tggaaaatta
       61 caacaatggc gacgtgtcaa taaattggaa tgttccaagt tatgacgtgg aatataaaat
      121 gagcaataaa gatgaaaatg ttaaacaatt aagaagtcgt tataacattc ctactgataa
      181 agctccaatg ttaaaaatgc atattgacgg ggacttaaaa ggtagttctg ttggatataa
      241 aaggttagaa atagattttt caaaagaagg tagggatatt tcagtcattg attatttaag
      301 ttataagcca gcgaaaaaat agtactgata attaaatatt agggtgtgaa ggaatggaat
      361 atctaaaaag gcttgcattg ttaataagtg ttattatttt gaccattttt ataatgggtt
      421 gtgatagtca aagcgatact gcagaaaatc caaaagaagg ttcaaaagaa gcacaaatta
      481 aaaagagttt ttcgaaaacg ttagatatgt atccaattaa gaatctcgag gatttttatg
      541 acaaagaagg atatcgagat ggcgaattta aaaaagatga taaaggtact tggctaatta
      601 gatccgaaat agttaaacag ccaaagggca aagtgatgaa aacaagaggt atgcaattat
      661 atattaatag aaataccgaa acagccaaag gtttctttgt tttgaaagaa ataagtgaaa
      721 ataataatcg tgtaaataaa gataaggagg aaaaatacga agtgaaaatg gtaggaaata
      781 aaattattcc tactgaacaa attaatgacg agaaaataaa aaaagaaatt gaaaacttca
      841 agttttttgt gcaatatgga aactttaaaa atttcgaaaa atacaacaat ggtgagtttt
      901 catataatcc tgaagcacca atttattcgg ctaaatatca attacacaac gatgattaca
      961 atgtaaggca actacgtaaa agatatgaca tttcaacaaa agaaacaccg aagttacttt
     1021 tgaaaggtgg aggagattta aaaaattcct cagttggtca aaacgatatt gaatttactt
     1081 ttgttgaaag aaaaggtgag aatatttatt ttaacgatag tgttgaattc ataccaagta
     1141 agtaaagtta aattaaaatg tgtggttaga tgaaatgatc aaatatcaaa aaatgtgcaa
     1201 agagatgtga caagatgaag tgttttcaga aattatacat atttatatta attttaatcg
     1261 tattaatggc aggatgcgaa agtaataaga tcactggaga ttcgaaagaa acacagatca
     1321 aaaagagctt tgcgaaaaca ttagatgtat accctacgaa aaatctagaa gatttttatg
     1381 acaaagaagg atatcgagat ggcgaattta aaaagggtga caaagggaag tgggttatta
     1441 gatctgaaat gacaacagaa ctgaaaaatg aaaatatggt atctaaaggt atggtcatac
     1501 gtttaaatag aaatagtaga acatgcactg gtgaatattt tgtcaggata gttaaagaag
     1561 acagtgaggg caaggtatat agtgatgaac gaaaatatcc agtgaaaatg gaaaataata
     1621 aaatcattac attaaaacca atcgatgatg aaaaagtaaa aaaagaaatt gaagaattta
     1681 aattcttcgt acaatacggg aatttcaaag aattggaaaa ctataaagac ggagaagtga
     1741 catataaccc agaagcacca atatactctg cacaatatca attgaaaaat agtgattata
     1801 atgtagaaca actacgtaag cgatataata taacgacgaa aaaagcgcct aaattattat
     1861 tgaagggttc aggtaattta aaaggctcat cagttggata taaaaatatt gaatttacct
     1921 ttgttgaaaa taaggaagaa aatatttact tcacagatag tattaatttc aacccaagtg
     1981 aggataaata agtatattta gtattacaaa aacgttagaa aaattaataa taaagttaaa
     2041 ttaacaaact gtattaaatt catatagtca gttttgtttg atgacatgat agtagaaaaa
     2101 ttattatttt aataggttgt atgaactata caaatattta taaaaattaa aacagagaga
     2161 tgtgaaatga tggggtatat aaaaagaatg gctttataca tgagtgtatt tcttttaatc
     2221 atttttattg ttggatgtcg aaatatgaaa gatgaacaga aaaaagaaga acaaacaaat
     2281 aaaacagatt caaaagaaga acaaatcaaa aagagttttg agaaaacatt agatatgtat
     2341 ccaattaaga atctcgagga gttatacgac aaagaaggat accgagatgg cgaatttaaa
     2401 aagggtgata aagggatgtg gacgatatat acagatttcg ccaaaagtaa taaacaaggt
     2461 ggattgagta atgaaggtat ggtcttatac ttagatagaa atacacggac tgcaaaggga
     2521 cattattttg ttaagacatt ctataataag ggcaaattcc cagatagaaa aaattataaa
     2581 gttgaaatga aaaataataa aattatctta ttagataaag tagaagatac aaatctaaaa
     2641 aagagaatag aaaactttaa attttttgga caatatgcaa accttaaaga attgaaaaac
     2701 tacaacaatg gtgatgtctc aattaatgag aatgttccaa gttatgacgc aaaatttaaa
     2761 atgagcaata aagatgaaaa tgttaagcaa ttaagaagtc gttataatat tcctactgat
     2821 aaagcaccgg tattaaaaat gcatattgat ggtaatttga aaggaagttc tgtgggttat
     2881 aaaaagttgg aaattgactt ttcaaaaggt ggaaaaagcg atttgtcagt aatagattct
     2941 ttgaatttcc agccggcgaa ggtagatgaa gatgatgaat gatgaggatg gtgtgtaaca
     3001 atgaagtcta taaaaaggat tggattgtgc attagtttgt tgattttaat catctttgtt
     3061 acatcttgtg atggtgataa taagatcatt ggagattcaa aagaagaaca aatcaaaaag
     3121 agctttgcga aaacgttaga tatctaccct attaagaatc tcgaggattt atacgacaaa
     3181 gaaggatatc gagatggcga atttaaaaaa gatgataaag gtacttggct aattagatct
     3241 gaaatgaaaa tccaattaaa aggagaaaat ctggaatcta gaggagcagt tttagaaatt
     3301 aacagaaata ctagaacggc taaagggcat tatattgtta gagaagttgt tgaagatagc
     3361 gatggaatga cacacaatca tacaaaaaga tatcctgtga aaatggaaaa taataaaatg
     3421 attccattaa aaccaatcga tgacgaaaaa gtaaaaaaag aaatcgaaga atttaacttc
     3481 tttgtacaat acgggaattt caaagaattg gaaaactata aagaggacga agtgtcatat
     3541 aacccagaag taccaattta ctctgcaaaa tatcaattga aaaacagtga ttacaatgtt
     3601 gaacaattaa ggaagcgata taatatcccg acgcaaaaag cgcccaaatt attattgaaa
     3661 ggctcaggta atttaaaagg ttcatcagtc ggatataaaa atattgaatt tacctttatt
     3721 gaaaacaagg aagaaaatat ttacttcaca gatagtatct actttaatcc aagcgaggat
     3781 aaataaatat aattactaat ataaaaaata acgttagaac atttaataat aaagttaaaa
     3841 tgaattacat gtattaaatt gaataagtta gttttgtttg ataacataaa agttgaataa
     3901 tcactatttt aataagttgt atgaaatatt caaatgttta taaaattaaa acagagagat
     3961 gtgaaatgat ggagtatata aaaaaaattg ctttgtacat gagtgtatta cttttaatca
     4021 tttttattgg gggatgtgga aatatgaaag atgaacagaa aaaagaggaa caaacgaata
     4081 aaacagattc aaaagaagaa caaatcaaaa agagttttgc gaaaacgtta gatatgtatc
     4141 caattaagaa tctcgaggat ttatacgaca aagaaggata tcgagatggt gagtttaaaa
     4201 aaggcgataa aggtacgtgg actatactta caggtttttc aaaaagtaac aaaccaggag
     4261 tattagatga tgaaggcatg gtgttatatc ttaatagaaa taccaaaaag gcaacaggtt
     4321 attattttgt aaataaagtt tatg
//
LOCUS       DALPQQ010000156         4319 bp    DNA     linear   BCT 22-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus strain K18-6-464
            SAMD00233528-rid16434743.denovo.157, whole genome shotgun sequence.
ACCESSION   DALPQQ010000156 DALPQQ010000000
VERSION     DALPQQ010000156.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMD00233528
            Sequence Read Archive: DRR236061
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 4319)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4319)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001543423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001543423.1
            Genome Coverage       :: 77x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/22/2022 17:09:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,811
            CDSs (total)                      :: 2,743
            Genes (coding)                    :: 2,689
            CDSs (with protein)               :: 2,689
            Genes (RNA)                       :: 68
            rRNAs                             :: 2, 4, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 4, 2 (16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 54
            CDSs (without protein)            :: 54
            Pseudo Genes (ambiguous residues) :: 0 of 54
            Pseudo Genes (frameshifted)       :: 27 of 54
            Pseudo Genes (incomplete)         :: 27 of 54
            Pseudo Genes (internal stop)      :: 10 of 54
            Pseudo Genes (multiple problems)  :: 10 of 54
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4319
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMD00233528-rid16434743.denovo.157"
                     /strain="K18-6-464"
                     /db_xref="taxon:1280"
                     /geo_loc_name="Japan: Niigata"
     gene            complement(244..936)
                     /locus_tag="O7798_002388"
     CDS             complement(244..936)
                     /locus_tag="O7798_002388"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501440.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flavin reductase family protein"
                     /protein_id="HDC2864586.1"
                     /translation="MNYSPKQGVRSHGLPHDPFKSSTVPRPIGWISTVSKDGKDNLAP
                     YSQYQNLTWDPPMVMFAANQSVLGDHERKDTVKNAEETGWFVWNMATYDLREAVNLSS
                     KALPPEEDEFNFAGVTKEKCIEAPGYRVKESPVHFECEYVQTIRIPTGDPVSTVDIVI
                     GRVAQVHIDDKVILDNGKLDIKSIKPIARLGYYDYTVVNEIFEMKAPAASKEELAGLE
                     GRNFDNQSDEKI"
     gene            1172..1630
                     /locus_tag="O7798_002389"
                     /pseudo
     CDS             1172..1630
                     /locus_tag="O7798_002389"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001226788.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            1617..1919
                     /locus_tag="O7798_002390"
     CDS             1617..1919
                     /locus_tag="O7798_002390"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501442.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDC2864587.1"
                     /translation="MRTNDHITDLDAIELSSGWNYNSKLETGKNALLSDSLLRDIKVL
                     SSNAKGDADILETELRAVINSMSQNEGKSVDALKNSTASLKNNLTKLKEQLDKTTH"
     gene            2073..2432
                     /locus_tag="O7798_002391"
     CDS             2073..2432
                     /locus_tag="O7798_002391"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501443.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDC2864588.1"
                     /translation="MILRYATNLKLAKELYQASKPKLQEDKGMIELFEHTFGLQKELV
                     KYVGIAEATTAALYSASFINKNISRLASLSTIGILSVAAYKHFEAGQGKKGAQHALNL
                     LGLATLSLLDTFSCNKK"
     gene            complement(2517..3128)
                     /locus_tag="O7798_002392"
     CDS             complement(2517..3128)
                     /locus_tag="O7798_002392"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501444.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flavin reductase family protein"
                     /protein_id="HDC2864589.1"
                     /translation="MYTFDAQSLTARENYKLLIGSIIPRPIAFVTTLNQDASVNAAPF
                     SFFNIVNNHPPMIAIAVQRAGGKRKDTALNIERTGDFVVHITDEDNVQDINETAAPLA
                     YGDSELSRTELSLLTSTTIKTPGIKDAKMRFECKLSQMILLGDVLDGADLIIGEIVTY
                     HIDDSIYEGDFKINPHALQAVSRLAGNDYAKLGGIFTIKRPEK"
     gene            complement(3207..3683)
                     /locus_tag="O7798_002393"
     CDS             complement(3207..3683)
                     /locus_tag="O7798_002393"
                     /EC_number="1.8.4.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501445.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide-methionine (S)-S-oxide reductase"
                     /protein_id="HDC2864590.1"
                     /translation="MAVVYVAGGCLWGVEAFFATIPGIIHTEAGRANGRSSKLDGPYD
                     GYAECVKLHFDDRMLTITDIMNYLFEIIDPYSVNQQGNDIGQKYRTGLYSCVDDHLIE
                     ARQFIERRKDRDQIAVEVLPLSNYIKSAEEHQQHLEKYPEDMHMCHISKDLLNKYK"
     gene            complement(3686..4186)
                     /locus_tag="O7798_002394"
     CDS             complement(3686..4186)
                     /locus_tag="O7798_002394"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501446.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HDC2864591.1"
                     /translation="MVLRKVIMQDLDQIIALENIGFSPEEAATREALKLRIEQIQETF
                     IVAEKNDEVIGYINGPVIKERYISDDLFKNVSTNNSEGGYISVLGLVVAPNYQGQGIA
                     GRLLNYFETLAKNHHRHGVTLTCRESLISFYEKYGYRNEGVSESCHGGIKWYNLVKNI
                     KKDDEV"
BASE COUNT         1455 a          796 c          601 g         1467 t
ORIGIN      
        1 agttaattta caactaaacg ataaatatta tatgcaaaat acatctttaa tattaaagta
       61 ataccaatat tttttcaata aacctagtgt aatatatgtg taattctaaa agattcttct
      121 ttaaaaatat aaatgccacg acatattgct ttaacatttt catttataaa gcgaaaaaat
      181 gcatcgctac taagttgaat gtttagtaag gatgcattga attcactaaa atgattaaat
      241 tacttatatc ttttcatctg attgattatc gaaatttctt ccttctaaac ctgctaactc
      301 ttctttagaa gctgcaggtg ctttcatttc aaatatctca ttcactactg tgtaatcgta
      361 atatcctaat ctggcaatag gtttaatcga cttaatgtcc aatttaccat tatcaagaat
      421 aaccttatcg tcaatatgaa cttgggcaac tcttcctata acaatatcta cggtagatac
      481 tggatctcca gttggaatac gaatcgtttg aacgtactca cattcaaaat gaactggcga
      541 ttcttttaca cgatatcctg gagcttctat acatttttcc tttgttacac ctgcaaaatt
      601 aaattcatcc tcttctggtg gcaatgcttt cgatgataaa ttaactgctt ctcttaaatc
      661 atacgttgcc atattccaca caaaccaacc tgtctcttca gcatttttca ctgtatcttt
      721 acgttcgtga tcaccaagaa cggattgatt tgctgcgaac ataaccatag gcggatccca
      781 agttaagttt tgatactgac tataaggcgc taaattatct ttcccatctt tcgatacagt
      841 agagatccac cctattggac gtggtactgt actactttta aatgggtcgt gcggtaaacc
      901 atgacttctt acaccttgtt ttggcgaata attcatacta tcttcacccc ttataagtaa
      961 ttacatttaa ggttacgccc tctttacata agcgtctaat ataaataaac aatttattta
     1021 taagtagaaa ctatatatga cgtggttgct tataatttgc gttcttgatt cgaaaaattc
     1081 agataaggat ttatacaatt aatatttatg atatcttttg taaatttaat taattatagt
     1141 tacttcaatc atgattagtt tataataata aagtgaaatt gaaaaagaca gctattatgc
     1201 gatgagcgaa aaacttcaag taaaacaaga atttaacggc gttacaaggc aatacttgaa
     1261 tttcagaaca gatagtatcg atgatctgga taagttcaaa aaagaattca aacctgttat
     1321 gcacttaaaa ggtgatgcat tcaatcaaca gttacaatct ttgattaaca aatatccaca
     1381 aatacaaaaa aatatgaaat cagagttcat tgcttattat gataaagaaa aaaatagaga
     1441 aacagtaaaa aactatgctt ggaaccttca aaaatctata aatgacatta tgcaatcata
     1501 tcctagcaca aaatttgtac agttttataa agatgatgtt tccccgtcaa tggtagatgg
     1561 aaatggccgt ttaaaatcgg atactaatgt aatttccatc gagggaggaa agtatgatga
     1621 gaacaaatga tcatataacc gatttagatg ctattgagtt aagtagcggt tggaattaca
     1681 attcgaaatt ggagactggc aaaaatgcac tactatcaga tagcctttta agagatatta
     1741 aagtattaag ttctaatgct aaaggcgacg ctgacatact agaaacagaa cttcgtgctg
     1801 taataaactc aatgtctcaa aacgaaggta aatctgttga tgcacttaaa aatagtaccg
     1861 cttctctaaa aaacaatcta accaaattaa aagagcaact cgacaaaact acacattaat
     1921 ttcatacatt ttgagtgaac agaattatat ttccatagca aacattccta aactacacat
     1981 acgttacata attgattcat ttttatagaa acgggtaaaa atgataaagt aatcatcttt
     2041 cacaaaaaat caaatattgg gaggaattaa atatgatttt gcgttacgca acgaatttaa
     2101 aacttgcgaa agagctatac caagccagta aacctaaatt gcaagaagat aagggtatga
     2161 ttgaactgtt tgaacatact tttggcttgc aaaaagaact tgtaaaatac gtcggcattg
     2221 cagaagcaac tactgctgct ttatactcag ctagctttat caataaaaac atttctcgcc
     2281 ttgcatcact atcaacgata ggcattttaa gtgtagctgc ttacaaacat ttcgaagctg
     2341 gccaaggtaa aaaaggtgca caacatgcat taaatttatt aggtcttgct actttaagtt
     2401 tactagatac attttcttgt aataaaaaat agtcttcatt ttagaagcac atactttagc
     2461 acctgtgtac ttttgattca attcataaac ggtataccgc tatagcatgt gttttattat
     2521 ttttctggtc tctttatcgt aaatattccc cctaatttag cataatcatt tccggctaaa
     2581 cgagaaacag cctgtaatgc gtgtggattg attttaaaat caccctcata aatactgtca
     2641 tcaatatgat aagttacaat ttcacctatt attaaatcag ccccatctaa tacatctcca
     2701 agcaatatca tttgcgatag tttacattcg aatctcattt tcgcatcttt aattcctggc
     2761 gtcttaatcg ttgtagatgt taaaagtgat aattctgtac gactcaactc actgtcacca
     2821 tatgctaacg gcgctgcagt ctcattaata tcttgaacat tatcttcgtc tgtaatatgc
     2881 acaacaaagt ctccagtccg ttctatattt aatgcagtat cttttctctt acctcctgca
     2941 cgttgaactg caatagcaat cattggcgga tgattattaa caatattaaa aaagctaaat
     3001 ggtgctgcat ttactgatgc atcttgattt aatgttgtaa caaaagctat aggtcgtgga
     3061 ataattgaac caattaataa tttatagttt tctctagcag ttaatgattg tgcatcaaac
     3121 gtatacataa tacctacctc ttttctaagt atatctaggt atttctccga ttttggttaa
     3181 tttaaacatc tattctcctc tgaaaatcac ttgtatttat ttagcaaatc ttttgaaata
     3241 tgacacatat gcatatcttc tggatatttt tctaaatgtt gctgatgttc ttcagcactt
     3301 ttaatgtagt tagacagcgg taagacttcc actgcaattt gatctctgtc tttacgtcgt
     3361 tcaatgaact gacgcgcttc aattaagtgg tcatctacac aactatataa acccgttcga
     3421 tacttttgtc caatatcatt tccttgttga ttcacactgt aaggatcaat gatttcaaat
     3481 aaataattca taatgtctgt aattgttaac atacgatcat cgaaatgaag tttgacacat
     3541 tcagcataac catcatacgg accgtctaat ttagagcttc ttccatttgc tcttcctgct
     3601 tctgtatgta taattccagg tattgttgca aaaaatgctt caacacccca taaacatcct
     3661 cctgctacat aaacaactgc catatttaca cctcatcatc cttttttata tttttaacaa
     3721 ggttatacca tttaataccg ccatgacatg attctgatac accttcatta cgatacccat
     3781 atttttcata aaatgaaatt aatgattctc gacatgttaa cgttacacca tgtcgatgat
     3841 gattcttagc aagagtttca aaatagttta gtaagcgacc tgcaataccc tgaccttgat
     3901 aatttggtgc tacaacaaga cctaacacac taatatagcc accttcacta ttatttgtgg
     3961 agacattttt aaataaatca tcgctaatgt aacgctcttt tatgactgga ccgttgatgt
     4021 atccaattac ttcatcattc ttttcagcta caataaaagt ttcttgaatt tgttcaattc
     4081 tcaatttcaa tgcctctcgt gttgcagctt cttccggtga aaaaccaata ttttcaagtg
     4141 caataatttg atctaagtcc tgcatgatta cttttcttaa taccataaaa acacttcctt
     4201 agccctatat atcaaaagta ataccttcat ctttatattc attattttca aactaccttc
     4261 actataaaaa acgagtcttt ttattgaaag ccattcgcct taatcaatta gacaagttg
//
LOCUS       DALPQQ010000157         4225 bp    DNA     linear   BCT 22-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus strain K18-6-464
            SAMD00233528-rid16434743.denovo.158, whole genome shotgun sequence.
ACCESSION   DALPQQ010000157 DALPQQ010000000
VERSION     DALPQQ010000157.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMD00233528
            Sequence Read Archive: DRR236061
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 4225)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4225)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001543423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001543423.1
            Genome Coverage       :: 77x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/22/2022 17:09:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,811
            CDSs (total)                      :: 2,743
            Genes (coding)                    :: 2,689
            CDSs (with protein)               :: 2,689
            Genes (RNA)                       :: 68
            rRNAs                             :: 2, 4, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 4, 2 (16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 54
            CDSs (without protein)            :: 54
            Pseudo Genes (ambiguous residues) :: 0 of 54
            Pseudo Genes (frameshifted)       :: 27 of 54
            Pseudo Genes (incomplete)         :: 27 of 54
            Pseudo Genes (internal stop)      :: 10 of 54
            Pseudo Genes (multiple problems)  :: 10 of 54
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4225
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMD00233528-rid16434743.denovo.158"
                     /strain="K18-6-464"
                     /db_xref="taxon:1280"
                     /geo_loc_name="Japan: Niigata"
     gene            <1..484
                     /locus_tag="O7798_002395"
     CDS             <1..484
                     /locus_tag="O7798_002395"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000593194.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="DNA-protecting protein DprA"
                     /protein_id="HDC2864592.1"
                     /translation="SLEFLLSNDKSKYLTIVSGLAQGADAMAHQIALKYNLPTIAVLA
                     FGHQTHYPKSTLALRNKIEEKGLVISEYPPHTPIAKYRFPERNRIISGLSKGVLITEA
                     KEQSGSHITIDFALEQNRNVYVLPGSMFNPMTKGNLLRIQEGAKVVLNANDIFEDYYI
                     "
     gene            658..2733
                     /gene="topA"
                     /locus_tag="O7798_002396"
     CDS             658..2733
                     /gene="topA"
                     /locus_tag="O7798_002396"
                     /EC_number="5.6.2.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499758.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I DNA topoisomerase"
                     /protein_id="HDC2864593.1"
                     /translation="MTLADNLVIVESPAKAKTIEKYLGKKYKVIASMGHVRDLPRSQM
                     GVDTEDNYEPKYITIRGKGPVVKELKKHAKKAKNVFLASDPDREGEAIAWHLSKILEL
                     EDSKENRVVFNEITKDAVKESFKNPREIEMNLVDAQQARRILDRLVGYNISPVLWKKV
                     KKGLSAGRVQSVALRLVIDRENEIRNFKPEEYWTIEGEFRYKKSKFNAKFLHYKNKPF
                     KLKTKKDVEKITAALDGDQFEITNVTKKEKTRNPANPFTTSTLQQEAARKLNFKARKT
                     MMVAQQLYEGIDLKKQGTIGLITYMRTDSTRISDTAKVEAKQYITDKYGESYTSKRKA
                     SGKQGDQDAHEAIRPSSTMRTPDDMKSFLTKDQYRLYKLIWERFVASQMAPAILDTVS
                     LDITQGDIKFRANGQTIKFKGFMTLYVETKDDSDSEKENKLPKLEQGDKVTATQIEPA
                     QHYTQPPPRYTEARLVKTLEELKIGRPSTYAPTIDTIQKRNYVKLESKRFVPTELGEI
                     VHEQVKEYFPEIIDVEFTVNMETLLDKIAEGDITWRKVIDGFFSSFKQDVERAEEEME
                     KIEIKDEPAGEDCEICGSPMVIKMGRYGKFMACSNFPDCRNTKAIVKSIGVKCPKCND
                     GDVVERKSKKNRVFYGCSKYPECDFISWDKPIGRDCPKCNQYLVENKKGKTTQVICSN
                     CDYKEAAQK"
     gene            2889..4196
                     /gene="trmFO"
                     /locus_tag="O7798_002397"
     CDS             2889..4196
                     /gene="trmFO"
                     /locus_tag="O7798_002397"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499759.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methylenetetrahydrofolate--tRNA-(uracil(54)-
                     C(5))-methyltransferase (FADH(2)-oxidizing) TrmFO"
                     /protein_id="HDC2864594.1"
                     /translation="MTQTVNVIGAGLAGSEAAYQLAERGIKVNLIEMRPVKQTPAHHT
                     DKFAELVCSNSLRGNALTNGVGVLKEEMRRLNSIIIEAADKARVPAGGALAVDRHDFS
                     GYITETLKNHENITVINEEINAIPDGYTIIATGPLTTETLAQEIVDITGKDQLYFYDA
                     AAPIIEKESIDMDKVYLKSRYDKGEAAYLNCPMTEDEFNRFYDAVLEAEVAPVNSFEK
                     EKYFEGCMPFEVMAERGRKTLLFGPMKPVGLEDPKTGKRPYAVVQLRQDDAAGTLYNI
                     VGFQTHLKWGAQKEVIKLIPGLENVDIVRYGVMHRNTFINSPDVLNEKYELISQPNIQ
                     FAGQMTGVEGYVESAASGLVAGINLAHKILGKGEVVFPRETMIGSMAYYISHAKNNKN
                     FQPMNANFGLLPSLETRIKDKKERYEAQANRALDYLENFKKTL"
BASE COUNT         1611 a          628 c          807 g         1179 t
ORIGIN      
        1 gtctttagaa tttttattat caaatgataa aagcaaatat ttaacaattg tttccggcct
       61 tgctcaagga gctgatgcaa tggcacatca aatagcttta aaatacaatc tccctacaat
      121 tgcagtttta gcctttggcc atcaaacaca ttatcccaaa agtacattag cattaagaaa
      181 taaaatagaa gaaaaaggtt tagttatatc tgaatatcca ccacatacac caatcgctaa
      241 atatagattt cctgagcgca atagaattat cagcggtttg tcaaaagggg ttttaattac
      301 tgaggctaag gaacaaagtg gcagtcacat cacgatagat tttgcattag agcaaaatag
      361 aaatgtttat gttttacctg gatctatgtt taatcctatg acaaaaggta atttattacg
      421 tatccaagaa ggtgctaagg tagtattaaa cgctaatgat atatttgaag actactatat
      481 ttaaaactaa aaataacgag ttgcttcata tttcttttgt ttccctttgt aatttatttt
      541 ttaataaaat ctataaaaaa tagacaggga aaatgatttg tttagatata aaacgttgac
      601 aaaagcaaaa ttaagcgttt atcatttatc tttagtaatt agattagcga gggggaaatg
      661 acattggcag ataatttagt cattgttgaa tcgcctgcaa aagcaaaaac cattgaaaag
      721 tatttaggta agaaatataa agttatagct tcaatgggac acgtcagaga cttaccaaga
      781 agtcaaatgg gtgtcgacac tgaagataat tacgaaccaa aatatataac aatacgcgga
      841 aaaggtcctg ttgtaaaaga attgaaaaaa catgcaaaaa aagcgaaaaa cgtctttctc
      901 gcaagtgacc ccgaccgtga aggtgaagca attgcttggc atttatcaaa aattttagag
      961 cttgaagatt ctaaagaaaa tcgcgttgtt ttcaacgaaa taactaaaga cgctgttaaa
     1021 gaaagtttta aaaatcctag agaaattgaa atgaacttag tcgatgcaca acaagcgcgt
     1081 cgaatattag atagattagt tggctataac atctcgccag ttctttggaa aaaagtaaaa
     1141 aaagggttgt cagcgggtcg agttcaatct gttgcacttc gtttagtcat tgaccgtgaa
     1201 aatgaaattc gaaactttaa accagaagaa tattggacta ttgaaggaga atttagatac
     1261 aaaaaatcaa aattcaatgc taaattcctt cattataaaa ataaaccttt taaactaaaa
     1321 acgaaaaaag atgttgagaa aattacagct gcattagatg gagatcaatt cgaaattaca
     1381 aacgtgacta aaaaagaaaa aacgcgtaat ccagcaaacc catttacaac ttctacatta
     1441 caacaagagg cggcacgtaa attaaacttt aaagcaagaa aaacaatgat ggtcgcacaa
     1501 caattatatg aaggtataga tttgaaaaaa caaggtacga ttggtttaat aacatatatg
     1561 agaaccgatt ctacacgtat ttcagatact gccaaagttg aagcaaaaca gtatataact
     1621 gataaatacg gtgaatctta cacttctaaa cgtaaagcat cagggaaaca aggtgaccaa
     1681 gatgcccatg aggctattag accttcaagt actatgcgta cgccagatga tatgaagtca
     1741 tttttgacga aagaccaata ccgattatac aaattaattt gggaacgatt tgttgctagt
     1801 caaatggctc cagcaatact tgatacagtc tcattagaca taacacaagg tgacattaaa
     1861 tttagagcga atggtcaaac aatcaagttt aaaggattta tgacacttta tgtagaaact
     1921 aaagatgata gtgatagcga aaaggaaaat aaactgccta aattagagca aggtgataaa
     1981 gtcacagcaa ctcaaattga accagctcaa cactatacac aaccacctcc aagatatact
     2041 gaggcgagat tagtaaaaac actagaagaa ttgaaaattg ggcgaccatc aacttatgca
     2101 ccgacaatag atacgattca aaagcgtaac tatgtcaaat tagaaagtaa gcgttttgtt
     2161 cctactgagt tgggagaaat agttcatgaa caagtgaaag aatacttccc agagattatt
     2221 gatgtggaat tcacagtgaa tatggaaacg ttacttgata agattgcaga aggcgacatt
     2281 acatggagga aagtaatcga cggtttcttt agtagcttta aacaagatgt tgaacgtgct
     2341 gaagaagaga tggaaaagat tgaaatcaaa gatgagccag ccggtgaaga ctgtgaaatt
     2401 tgtggttctc ctatggttat aaaaatggga cgctatggta agttcatggc ttgctcaaac
     2461 ttcccggatt gtcgtaatac aaaagcgata gttaagtcta ttggtgttaa atgtccaaaa
     2521 tgtaatgatg gtgacgtcgt agaaagaaaa tctaaaaaga atcgtgtctt ttatggatgt
     2581 tcgaaatatc ctgaatgcga ctttatctct tgggataagc cgattggaag agattgtcca
     2641 aaatgtaacc aatatcttgt tgaaaataaa aaaggcaaga caacacaagt aatatgttca
     2701 aattgcgatt ataaagaggc agcgcagaaa taatattttt atttcctaga tacattttaa
     2761 gattgttaaa tagaatcatt agtgaatctt attttaaaga tagtaaagga ttaatctaaa
     2821 taagtgcgga taatataaac ataacaacat aattaaaaga cataaatgac aataaaagga
     2881 gtatagaaat gactcaaact gtaaatgtaa taggtgctgg tcttgccggt tcagaagcgg
     2941 catatcaatt agctgaaaga ggaattaaag ttaatctaat agagatgaga cctgttaaac
     3001 aaacaccagc gcaccatact gataaatttg cggaacttgt atgttccaat tcattacgcg
     3061 gaaatgcttt aactaatggt gtgggtgttt taaaagaaga aatgagaaga ttgaattcta
     3121 taattattga agcggctgat aaggcacgag ttccagctgg tggtgcatta gcagttgata
     3181 gacacgattt ttcaggttat attactgaaa cacttaaaaa tcatgaaaat atcacagtta
     3241 ttaatgaaga aattaatgcc attccagatg gatacacaat tatcgcaaca ggaccactta
     3301 ctacagaaac ccttgcgcaa gaaatagtgg acattactgg taaagatcaa ctttatttct
     3361 atgatgcggc tgctccaatt attgaaaaag aatctattga tatggataaa gtttacttaa
     3421 agtcccgtta tgataaaggt gaagctgcat atttaaactg tcctatgact gaggatgaat
     3481 ttaatcgctt ttatgatgca gtattagaag ctgaagttgc gcctgtaaat tcatttgaaa
     3541 aagaaaaata tttcgagggt tgtatgcctt ttgaagtaat ggcagaacgc ggacgcaaga
     3601 cattactatt tggaccaatg aaaccagtag gattagaaga tccaaagact gggaaacgtc
     3661 cttatgcggt ggttcaatta agacaagatg acgctgctgg tacactctac aatattgttg
     3721 gcttccaaac gcatttaaaa tggggagctc aaaaagaagt cattaaatta attccaggct
     3781 tagaaaatgt tgatattgtt agatatggtg tgatgcatag aaataccttc attaattcac
     3841 cggacgtatt aaacgagaaa tatgaattga tttcacaacc aaacatacag tttgcgggac
     3901 aaatgactgg tgttgaaggt tatgtagaaa gcgcagctag cggcttagtt gcaggtatca
     3961 atcttgcgca taaaatatta ggcaagggtg aggtagtatt tccgagagaa acaatgattg
     4021 gaagtatggc ttactatatt tctcatgcta aaaacaataa gaatttccaa cctatgaatg
     4081 ctaacttcgg gttattacca tctttagaaa ctagaattaa agataaaaaa gaacgctatg
     4141 aagcacaagc taatagagct ttggattact tagaaaattt caaaaaaact ttataaaata
     4201 gttagaaaga ctagatatgc tattc
//
LOCUS       DALPQQ010000158         4114 bp    DNA     linear   BCT 22-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus strain K18-6-464
            SAMD00233528-rid16434743.denovo.159, whole genome shotgun sequence.
ACCESSION   DALPQQ010000158 DALPQQ010000000
VERSION     DALPQQ010000158.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMD00233528
            Sequence Read Archive: DRR236061
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 4114)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4114)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001543423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001543423.1
            Genome Coverage       :: 77x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/22/2022 17:09:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,811
            CDSs (total)                      :: 2,743
            Genes (coding)                    :: 2,689
            CDSs (with protein)               :: 2,689
            Genes (RNA)                       :: 68
            rRNAs                             :: 2, 4, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 4, 2 (16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 54
            CDSs (without protein)            :: 54
            Pseudo Genes (ambiguous residues) :: 0 of 54
            Pseudo Genes (frameshifted)       :: 27 of 54
            Pseudo Genes (incomplete)         :: 27 of 54
            Pseudo Genes (internal stop)      :: 10 of 54
            Pseudo Genes (multiple problems)  :: 10 of 54
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4114
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMD00233528-rid16434743.denovo.159"
                     /strain="K18-6-464"
                     /db_xref="taxon:1280"
                     /geo_loc_name="Japan: Niigata"
     gene            198..821
                     /locus_tag="O7798_002398"
     CDS             198..821
                     /locus_tag="O7798_002398"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501121.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TetR/AcrR family transcriptional regulator"
                     /protein_id="HDC2864595.1"
                     /translation="MKEDRRIRKTKSSIKQAFTKLLQEKDLEKITIRDITTRADINRG
                     TFYLHYEDKYMLLADMEDEYISELTTYTQFDLLRGSSIEDIANTFVNNILKNIFQHIH
                     DNLEFYHTILQLERTSQLELKINEHIKNNMQRYISINHSIGGVPEMYFYSYVSGATIS
                     IIKYWVMDKQPISVDELAKHVHNIIFNGPLRIMAENRLHKSNLDSLT"
     gene            867..1811
                     /locus_tag="O7798_002399"
     CDS             867..1811
                     /locus_tag="O7798_002399"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501122.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="magnesium transporter CorA family protein"
                     /protein_id="HDC2864596.1"
                     /translation="MITSFRHSEDIDKHIIKTPLDHTASWINVVEPDREEIENLMEQY
                     NIPEDFIRDPLDSEESSRIEYDEDTGYSLIIIDLPIVNSTNRSVLSFVTIPLGIIIGN
                     GIIVTVCDAENEFLENLPKRDINLKFHSRFALEILTTIADHYNRNLRLLNKSRIRIEK
                     ELKNNITNKQLFKLMEVEKSLVYFLAALKGNDTIIKKLFRLPAIKRFEEDEELLEDLI
                     IENNQAIETTELHQRILESITTSYASLLSNDMNTIMKTLTLFTVLLTLPTLVFSFFGM
                     NVPLPIDDHSYISWIIVVGISLILVVIVSIFLWRKQKL"
     gene            complement(1897..3339)
                     /locus_tag="O7798_002400"
     CDS             complement(1897..3339)
                     /locus_tag="O7798_002400"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001666995.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS sucrose transporter subunit IIBC"
                     /protein_id="HDC2864597.1"
                     /translation="MNYKQSAEEILNAIGGEENLDAMAHCATRLRLVLNDESLVNEEA
                     LNNMDVVKGTFSTGGQYQIIIGSGTVNKVFSELEKLTGKEASTTSEVKAQSAKNMNPL
                     QRFVKMLSDIFVPIIPAIVAGGLLMGLNNILTAKDLFFSGKSLIDVYSQFAGLAEMIN
                     VFANAPFTLLPILIGFSAAKRFGGNPFLGAALGMILVHPSLMSAYDFPKAVEAGKAIP
                     YWDVFGLHINQVGYQGQVLPMLVAAYILASIEKGLRKVIPTVLDNLLTPLLSIFITAF
                     LTFSFVGPITRQLGYWLSDGLTWLYEFGGAIGGLIFGLLYAPIVITGMHHSFIAVETT
                     LIADATKTGGSFIFPIATMSNVAQGGAAIAAFFIIKQNKKLKGVASAAGISALLGITE
                     PAMFGVNLKLRYPFIGAIVGSGIGSAYIAFFKVKAIALGTAGLPGFISINPVHAGWLH
                     YFVGMTISFIIAITVTLILSKRKANKEVVE"
     gene            3522..3905
                     /locus_tag="O7798_002401"
     CDS             3522..3905
                     /locus_tag="O7798_002401"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501125.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YbgA family protein"
                     /protein_id="HDC2864598.1"
                     /translation="MKERGYIEQLWREEKYHVLLHSQQSYQMIRNALKTDLSLHQVQQ
                     MIDVALLIEPSIGSVCNAFDHMWGYLKKCANEEERQQSKLLKADFINGKIDTQTLLDF
                     LAELANKYDVQYLLQSRVLNTKRKR"
BASE COUNT         1454 a          701 c          600 g         1359 t
ORIGIN      
        1 gtgcaatcca taataattta tttttaaata tattcatttt attaattacc tccttattag
       61 acaatgtgtt gaatatttcg catgttgtct attataatat gtaagtggga ataaacaata
      121 cacaatgttc atcaatacgt tcattaatag acaaatacac ccacattgtt caataacaca
      181 aggaggttga tttatttttg aaagaagata ggcgaattag aaagacaaag tcctccatta
      241 aacaagcgtt cactaaatta ctacaagaaa aagatttaga aaagattacc attcgcgaca
      301 taacaacacg cgctgatatc aatagaggga cattttactt acattacgag gataaatata
      361 tgttactcgc agatatggaa gatgagtata tttcagaact aacgacatat actcaatttg
      421 atttgttacg cggttcttca attgaagaca ttgcgaatac ttttgtaaat aatatactca
      481 aaaatatttt ccaacatatt catgataatt tagagtttta tcatactatt ttacaattgg
      541 aacgcacgag tcaattagaa ttgaaaatca acgaacatat taaaaataat atgcaacgtt
      601 acattagtat caatcattct atcggaggcg ttccagagat gtatttttac agttacgttt
      661 ccggagcaac aatttcaatt attaaatact gggtaatgga caaacagccc atttcagttg
      721 atgaattagc taaacatgtg cataatatta tttttaatgg tccattaaga ataatggcag
      781 aaaaccgttt gcataaatca aaccttgatt cactaactta agtaatactc gcttttccta
      841 aatcctttag aaaggaacta tatatcatga ttacttcatt cagacattct gaagatatag
      901 ataaacatat tataaaaaca ccattagatc atacagcgtc atggattaat gtagtagaac
      961 cagaccgaga agaaattgaa aatcttatgg aacaatataa tatacctgaa gactttatac
     1021 gtgacccttt ggactcagaa gaaagttccc gtattgaata tgacgaagat actggttact
     1081 cattaatcat tattgattta cctatcgtca attcaactaa tcgtagcgtt ctatcttttg
     1141 taacgattcc attaggcatt attattggca acggtattat cgtaacagtt tgtgacgctg
     1201 aaaatgaatt tttagaaaat ttacctaagc gtgatattaa tttaaaattt cacagcagat
     1261 ttgcattaga aattttaact actattgccg accattataa tcgtaactta cgattactta
     1321 ataaaagtag aattcgtatt gagaaagaac taaaaaataa cattactaac aaacaacttt
     1381 tcaaattaat ggaagttgaa aaaagtttag tatacttttt agctgcctta aaaggtaacg
     1441 atacaattat taaaaagtta ttccgtttac ctgcaattaa acgttttgaa gaagatgaag
     1501 aattactaga agatttaatc attgaaaata accaagccat cgaaacaaca gaattacatc
     1561 aacgtatctt agaaagtatc acaacatcat acgcttcctt attatctaat gatatgaata
     1621 cgattatgaa gacattaaca cttttcacgg tactattaac gttaccaaca ctcgtattta
     1681 gtttcttcgg tatgaatgtg ccgttgccaa ttgatgacca tagttatata tcttggatta
     1741 ttgtggtagg tatttcatta attcttgtcg taattgttag tattttctta tggcgtaaac
     1801 agaaattata actaaattaa aaggtatgac agcttaaagt ttcatcctat tgcatttgca
     1861 atgactgata ctttgattac tgtcatacct ctttttttat tctacaactt ctttatttgc
     1921 ttttctttta gataaaatta aagtaactgt tatagcaatg atgaatgata ttgtcatacc
     1981 aacaaagtag tgtaaccatc ctgcatgtac tggattgatt gaaataaatc ctggcaatcc
     2041 agcagttcct aatgcgattg ctttaacctt gaagaaagca atatatgctg aaccaatacc
     2101 tgatccaacg atagcgccaa taaatggata tcttagtttt aagttaacac caaacatagc
     2161 cggttctgta ataccaagta atgctgaaat acctgcggca gatgccacac cttttaactt
     2221 cttattttgt ttaataataa agaacgctgc aattgctgca ccaccttgtg caacattaga
     2281 cattgtcgca atcgggaata taaatgatcc acccgtttta gtggcatctg caattaatgt
     2341 cgtttctaca gctataaagc tatgatgcat acctgtaata acaatcggag catacaataa
     2401 tccgaatatt aatccaccaa ttgcaccacc aaattcataa agccatgtta aaccatctga
     2461 taaccagtaa cctaattgtc gagtgattgg acctacaaat gaaaatgtta gaaatgctgt
     2521 tataaaaata gataacaatg gtgttaacaa attatctaac accgttggaa taactttgcg
     2581 taaccctttt tcaattgagg ctaagatata agctgctaca agcataggta acacttgtcc
     2641 ttgataacct acttgattaa tatgcaaacc aaaaacatcc caatatggaa tagccttacc
     2701 tgcttcaact gcttttggga aatcgtatgc gctcattagc gatggatgaa ctagtatcat
     2761 acctaatgca gcacctaaaa atggattgcc accaaagcgt tttgctgcac taaatccaat
     2821 taaaattggt aataatgtaa atggtgcatt cgcaaaaaca tttatcattt cagctaatcc
     2881 agcaaattga ctatatacat ctatcaatga tttacctgaa aagaataaat ctttcgcagt
     2941 caaaatgtta tttaacccca ttaataaacc accagcaacg atggctggta taatcggaac
     3001 aaagatatct gaaagcattt ttacaaatcg ctgtaacgga ttcatatttt tagcagattg
     3061 tgctttgact tccgaagtgg ttgatgcttc ttttccagtt aatttttcca gttcactaaa
     3121 tactttattg actgtaccag acccaataat aatttggtat tgtcccccag tagaaaacgt
     3181 ccctttaact acatccatat tgtttagcgc ctcttcattt actaaacttt catcatttaa
     3241 aactaatcgt agtctcgttg cacaatgcgc cattgcatct aaattctctt ctccgcctat
     3301 cgcgttcaaa atttcttctg cggattgctt ataattcata tatttagcct cctaattaga
     3361 accggttcca tttattccac tttattgtaa ccggttccaa aaatatttgc aacactctat
     3421 tatcatttta tataaacacc tacaccattt ttgatagcgc attcattttt attgctatac
     3481 tacatgcatg tatattaaca ttaattatcg gaggtaattt tatgaaagaa cgtggctata
     3541 tcgaacagct ttggcgtgag gaaaaatatc atgtattgtt acacagtcaa cagtcttacc
     3601 aaatgataag gaatgcttta aaaacggatt tatcacttca tcaagttcaa caaatgattg
     3661 atgttgcttt gttaattgaa ccgagtatag gaagtgtatg taatgctttt gatcatatgt
     3721 ggggatattt aaaaaaatgt gcgaatgaag aagaaagaca acaatcaaaa ctacttaaag
     3781 ctgattttat taatggtaaa atcgacaccc aaactttatt agatttttta gcagaacttg
     3841 ctaataaata tgatgttcaa tatttactac aaagtcgtgt tttaaacaca aaaagaaaga
     3901 gatagattga aactttagtt gtaacggaca aatagtagtc attggagttc agcaattcat
     3961 actttgtact aaagtttact ataatctatc tctcaaggtt taaatgtaca tatctatatt
     4021 aaaatgcgtt tcatgatgtt agaagatacc atacacattt aattagttac agcataaatc
     4081 aatttatacc cttaattatt acattgttta tatt
//
LOCUS       DALPQQ010000159         4092 bp    DNA     linear   BCT 22-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus strain K18-6-464
            SAMD00233528-rid16434743.denovo.160, whole genome shotgun sequence.
ACCESSION   DALPQQ010000159 DALPQQ010000000
VERSION     DALPQQ010000159.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMD00233528
            Sequence Read Archive: DRR236061
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 4092)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4092)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001543423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001543423.1
            Genome Coverage       :: 77x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/22/2022 17:09:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,811
            CDSs (total)                      :: 2,743
            Genes (coding)                    :: 2,689
            CDSs (with protein)               :: 2,689
            Genes (RNA)                       :: 68
            rRNAs                             :: 2, 4, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 4, 2 (16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 54
            CDSs (without protein)            :: 54
            Pseudo Genes (ambiguous residues) :: 0 of 54
            Pseudo Genes (frameshifted)       :: 27 of 54
            Pseudo Genes (incomplete)         :: 27 of 54
            Pseudo Genes (internal stop)      :: 10 of 54
            Pseudo Genes (multiple problems)  :: 10 of 54
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4092
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMD00233528-rid16434743.denovo.160"
                     /strain="K18-6-464"
                     /db_xref="taxon:1280"
                     /geo_loc_name="Japan: Niigata"
     gene            complement(132..1115)
                     /gene="lukD"
                     /locus_tag="O7798_002402"
     CDS             complement(132..1115)
                     /gene="lukD"
                     /locus_tag="O7798_002402"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500453.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bi-component leukocidin LukED subunit D"
                     /protein_id="HDC2864599.1"
                     /translation="MKMKKLVKSSVASSIALLLLSNTVDAAQHITPVSEKKVDDKITL
                     YKTTATSDNDKLNISQILTFNFIKDKSYDKDTLVLKAAGNINSGYKKPNPKDYNYSQF
                     YWGGKYNVSVSSESNDAVNVVDYAPKNQNEEFQVQQTLGYSYGGDINISNGLSGGLNG
                     SKSFSETINYKQESYRTTIDRKTNHKSIGWGVEAHKIMNNGWGPYGRDSYDPTYGNEL
                     FLGGRQSSSNAGQNFLPTHQMPLLARGNFNPEFISVLSHKQNDTKKSKIKVTYQREMD
                     RYTNQWNRLHWVGNNYKNQNTVTFTSTYEVDWQNHTVKLIGTDSKETNPGV"
     gene            complement(1117..2052)
                     /gene="lukE"
                     /locus_tag="O7798_002403"
     CDS             complement(1117..2052)
                     /gene="lukE"
                     /locus_tag="O7798_002403"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_114304764.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bi-component leukocidin LukED subunit E"
                     /protein_id="HDC2864600.1"
                     /translation="MFKKKMLAATLSVGLIAPLASPIQESRANTNIENIGDGAEVIKR
                     TEDVSSKKWGVTQNVQFDFVKDKKYNKDALIVKMQGFINSRTSFSDVKGSGYELTKRM
                     IWPFQYNIGLTTKDPNVSLINYLPKNKIETTDVGQTLGYNIGGNFQSAPSIGGNGSFN
                     YSKTISYTQKSYVSEVDKQNSKSVKWGVKANEFVTPDGKKSAHDRYLFVQSPNGPTGS
                     AREYFAPDNQLPPLVQSGFNPSFITTLSHEKGSSDTSEFEISYGRNLDITYATLFPRT
                     GIYAERKHNAFVNRNFVVRYEVNWKTHEIKVKGHN"
     gene            2852..3391
                     /locus_tag="O7798_002404"
     CDS             2852..3391
                     /locus_tag="O7798_002404"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500455.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDC2864601.1"
                     /translation="MVVYASHLSFLLFSNKKVLKINAYTGTDMAKLDLNSLDDEHVKL
                     LINELKYPETHIDVNELKTIVASRINERQEIISFKLGIKYLLTIKRGNIEKDRFSISI
                     IFKDTYHTLVRIDINGGTHDNPDGTIAPKSHIHIYNDKYDKKDRFAYEINLKDFPDIY
                     NLYNVYMSFLEYNNIKDLE"
     gene            3404..>4092
                     /locus_tag="O7798_002405"
     CDS             3404..>4092
                     /locus_tag="O7798_002405"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500456.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1828 domain-containing protein"
                     /protein_id="HDC2864602.1"
                     /translation="MTTFDAKKLKKEYLDWYNQTLEFSNLSNNVVRIDTPFKDNSLDN
                     LIIYALYDQSRDMITLTDDGYTIFDLENNGISLNKSKKRKKIFEEHLSAYGIKYNDKT
                     HEIFVQTNFKNFNKSKHNLLQCLIFVNDMYLLSNPKSQNIFTEDVANKLDEHNIYYGR
                     DLPIIGSSGVVHNFDFFISAKKNQKEKFINAISNPNNSMIIKSKITDAMQAKKIKRHR
                     QNEFIFILNDS"
BASE COUNT         1397 a          625 c          547 g         1523 t
ORIGIN      
        1 tgtaaatcgt cattaatttt atggtactat tgttagttta aacaaataat gtaacttctt
       61 tttttaatat gttgtgaata ttttttgttt aactcttaaa tttcgggttt aacttcctct
      121 atttctaaca gttatactcc aggattagtt tctttagaat ccgtaccgat taatttaaca
      181 gtatggtttt gccagtcaac ttcataagta gatgtaaacg ttactgtatt ttgatttttg
      241 tagttattac caacccagtg tagtcgattc cattgattag tatatctatc catttctctt
      301 tggtaagtta ctttgatttt agattttttt gtatcatttt gtttatgaga aagtacgctt
      361 ataaattctg ggttaaagtt accacgcgcc aataaaggca tttgatgtgt tggcaagaaa
      421 ttttgaccag catttgaact actttgtcta ccacctaaaa acagttcatt accatatgtt
      481 gggtcataac tatctctacc atatggtccc caaccattat tcataatttt gtgcgcctca
      541 acaccccagc caattgattt atgatttgtt tttctatcaa tcgtagttct gtaactttct
      601 tgtttataat ttatcgtttc tgaaaatgat tttgatccat ttaatccacc tgataagcca
      661 ttagatatat taatatctcc gccataagaa taacctaatg tttgttgaac ttggaattct
      721 tcattttgat ttttaggtgc atagtcaaca acatttacag catcatttga ttctgaacta
      781 accgaaacat tatacttacc gccccaataa aactgtgagt aattgtaatc ttttggatta
      841 ggctttttat aacctgaatt aatgtttccg gctgccttaa gtactaacgt atctttgtca
      901 taacttttat ccttaatgaa attaaacgtt aaaatttgag aaatattcaa tttatcatta
      961 tcagatgttg ctgttgtttt gtataaagtg attttgtcat ctactttttt ctcgcttaca
     1021 ggtgtgatat gttgagctgc atcaactgta ttcgatagca aaagcagtgc aattgatgaa
     1081 gcaactgatg atttgactaa ttttttcatt ttcatattaa ttatgtcctt tcactttaat
     1141 ttcgtgtgtt ttccaattaa cttcatatct aactacaaag tttctattta caaatgcatt
     1201 atgctttctt tctgcgtaaa taccagttct agggaataaa gtcgcatatg taatatctaa
     1261 gtttctacca tatgaaattt caaattcact cgtatcactt gaaccttttt catgtgatag
     1321 tgtagtgata aacgatggat taaagccact ttgaactaaa ggtggcaatt gattatcagg
     1381 agcaaaatat tctcttgctg aacctgttgg accatttgga ctttgtacga ataaatatct
     1441 atcatgcgca gatttttttc catcaggcgt aacaaattcg tttgctttaa caccccattt
     1501 aacagatttt gagttttgct tgtctacttc actgacataa ctcttttggg tataactaat
     1561 tgttttagaa taattaaatg agccattgcc acctatagat ggtgctgact ggaaattacc
     1621 tccaatgtta tatcctaatg tttgaccaac atcagtagtt tctattttgt ttttaggaag
     1681 gtaattgatt aagctaacat ttggatcttt agtcgtcagt cctatattat attggaatgg
     1741 ccaaatcatt cgtttagtta attcatatcc actacccttc acatctgaaa atgaagttct
     1801 ggaattaata aaaccttgca ttttaacaat taaagcgtct ttgttatatt ttttatcttt
     1861 tacaaagtcg aattggacat tttgagtaac gccccatttc ttactactta catcctccgt
     1921 acgtttgatt acttcggcac catcaccaat attttcaata ttagtatttg ctctagattc
     1981 ttgaatcgga gatgctaaag gtgcaatcag tcctactgac aaagttgcag ctaacatttt
     2041 tttcttaaac ataagtttca ctttctttct atataaattt ttaatacaaa tttattctag
     2101 attatttcac ttatttataa aattaactgt tcattaaaaa ataaaatgct ataaaatatt
     2161 aaaaatgaca caatttattc atttatgctg ctgaaaaccg gtcattttgg cgcaaccttc
     2221 attaccttta aatagttccc tttatattcg aacaatatga taaaattacc gatactcaat
     2281 cttttctctg taaaaataaa aacgaacttt aatcaaatct tcaaaaataa tgtttgtatt
     2341 atcacaaata atctataatt gaatttaaaa ttaactgatt attaactatt gtccgttaaa
     2401 cgaagatgat tacttcgtat actgttataa ctgaaatgtt ctatatatca tttcgtaata
     2461 tcgcttactt catctaaaaa aatttaatgc tatgatttag tctaattaaa aacatatata
     2521 tatttactat gaactaaaat ttcactttaa aaataaaaaa ccatgatttc gaagtcttca
     2581 taaactgaag cttctactct catggcaatt tatactatga tattcaatta taatgcctag
     2641 tctcatagta aacggctact acattcgcat gtacttcgtt ttactgtcca cgcatggtcg
     2701 ttgacttatt tatattataa tataaatatt ttatttttca atacttaatt ttaaaaattc
     2761 cctatgaaaa tgttgatgag ctacatcttt aaatcttatt atacattgta taaaattata
     2821 ttgcgaggta gtaaattgat attatacact tttggttgtg tatgcatctc acctatcttt
     2881 tttgcttttt tcaaataaga aagtattaaa aattaatgcc tatacaggaa cagacatggc
     2941 taaacttgat ttaaatagtc ttgacgacga gcacgtaaaa ttattaataa atgaattaaa
     3001 atatccagaa actcatatcg atgtaaatga attaaaaaca atagttgcta gtcgaataaa
     3061 tgaaaggcaa gaaataataa gttttaagtt aggaataaag tacttattaa caataaaaag
     3121 agggaacata gaaaaagata ggttttcaat ttcaatcatt ttcaaagata cctatcacac
     3181 cctagttaga atagatatta acggtggtac tcacgataat ccagatggaa caatcgctcc
     3241 gaaaagtcat attcacatat ataatgataa gtatgataaa aaggataggt ttgcttatga
     3301 aattaacttg aaagatttcc ccgacatcta taacttgtat aatgtgtata tgtcgttttt
     3361 agagtataat aatataaaag accttgaata aaggagggat aatatgacta catttgatgc
     3421 taaaaaatta aaaaaagaat atcttgattg gtataatcag accttagagt tttctaattt
     3481 atcaaacaat gtagtaagaa tagatactcc ttttaaagat aattctttag ataatttaat
     3541 aatttacgct ttatacgatc agtccagaga catgattaca ctgacagatg acggctatac
     3601 tatatttgat ttagaaaata atggtatttc tttaaataaa tcaaaaaaac gtaaaaagat
     3661 ttttgaagag cacctttcag cttacggtat taaatataac gataaaactc acgaaatttt
     3721 tgttcaaact aactttaaaa attttaataa atcgaaacat aatttattac agtgccttat
     3781 atttgttaat gatatgtact tactttctaa tcctaagtca cagaacatat ttacagaaga
     3841 tgttgcaaac aaattggatg aacataacat ttattacgga agagatttac ctattatagg
     3901 aagcagtggt gttgttcata atttcgactt ttttattagc gctaagaaaa atcaaaaaga
     3961 aaaatttatc aatgctattt ctaaccctaa taattctatg attattaagt cgaaaataac
     4021 ggatgctatg caagcaaaaa aaataaaaag acacaggcaa aatgagttta tttttatttt
     4081 aaatgactca aa
//
LOCUS       DALPQQ010000160         3996 bp    DNA     linear   BCT 22-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus strain K18-6-464
            SAMD00233528-rid16434743.denovo.161, whole genome shotgun sequence.
ACCESSION   DALPQQ010000160 DALPQQ010000000
VERSION     DALPQQ010000160.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMD00233528
            Sequence Read Archive: DRR236061
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 3996)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3996)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001543423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001543423.1
            Genome Coverage       :: 77x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/22/2022 17:09:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,811
            CDSs (total)                      :: 2,743
            Genes (coding)                    :: 2,689
            CDSs (with protein)               :: 2,689
            Genes (RNA)                       :: 68
            rRNAs                             :: 2, 4, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 4, 2 (16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 54
            CDSs (without protein)            :: 54
            Pseudo Genes (ambiguous residues) :: 0 of 54
            Pseudo Genes (frameshifted)       :: 27 of 54
            Pseudo Genes (incomplete)         :: 27 of 54
            Pseudo Genes (internal stop)      :: 10 of 54
            Pseudo Genes (multiple problems)  :: 10 of 54
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3996
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMD00233528-rid16434743.denovo.161"
                     /strain="K18-6-464"
                     /db_xref="taxon:1280"
                     /geo_loc_name="Japan: Niigata"
     gene            56..763
                     /gene="splA"
                     /locus_tag="O7798_002406"
     CDS             56..763
                     /gene="splA"
                     /locus_tag="O7798_002406"
                     /EC_number="3.4.21.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500442.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine protease SplA"
                     /protein_id="HDC2864603.1"
                     /translation="MNKNVMVKGLTALTILTSLGFAENISNQPHSIAKAEKNVKEITD
                     ATKEPYNSVVAFVGGTGVVVGKNTIVTNKHIAKSNDIFKNRVSAHHSSKGKGGGNYDV
                     KDIVEYPGKEDLAIVHVHETSTEGLNFNKNVSYTKFADGAKVKDRISVIGYPKGAQTK
                     YKMFESTGTINHISGTFMEFDAYAQPGNSGSPVLNSKHELIGILYAGSGKDESEKNFG
                     VYFTPQLKEFIQNNIEK"
     gene            888..1610
                     /gene="splB"
                     /locus_tag="O7798_002407"
     CDS             888..1610
                     /gene="splB"
                     /locus_tag="O7798_002407"
                     /EC_number="3.4.21.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500441.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine protease SplB"
                     /protein_id="HDC2864604.1"
                     /translation="MNKNVVIKSLAALTILTSVTGIGTTLVEEVQQTAKAENNVTKVK
                     DTNIFPYTGVVAFKSATGFVVGKNTILTNKHVSKNYKVGDRITAHPNSDKGNGGIYSI
                     KKIINYPGKEDVSVIQVEERAIERGPKGFNFNDNVTPFKYAAGAKAGERIKVIGYPHP
                     YKNKYVLYESTGPVMSVEGSSIVYSAHTESGNSGSPVLNSNNELVGIHFASDVKNDDN
                     RNAYGVYFTPEIKKFIAENIDK"
     gene            1668..2387
                     /gene="splC"
                     /locus_tag="O7798_002408"
     CDS             1668..2387
                     /gene="splC"
                     /locus_tag="O7798_002408"
                     /EC_number="3.4.21.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500440.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine protease SplC"
                     /protein_id="HDC2864605.1"
                     /translation="MNKNIVIKSMAALAILTSVTGINAAVVEETQQIANAEKNVTQVK
                     DTNIFPYNGVVSFKDATGFVIGKNTIITNKHVSKDYKVGDRITAHPNGDKGNGGIYKI
                     KSISDYPGDEDISVMNIEEQAVERGPKGFNFNENVQAFNFAKDAKVDDKIKVIGYPLP
                     AQNSFKQFESTGTIKRIKDNILNFDAYIEPGNSGSPVLNSNNEVIGVVYGGIGKIGSE
                     YNGAVYFTPQIKDFIQKHIEQ"
     gene            2508..3227
                     /gene="splF"
                     /locus_tag="O7798_002409"
     CDS             2508..3227
                     /gene="splF"
                     /locus_tag="O7798_002409"
                     /EC_number="3.4.21.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500436.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine protease SplF"
                     /protein_id="HDC2864606.1"
                     /translation="MNKNIIIKSIAALTILTSITGVGTTMVEGIQQTAKAENTVKQIT
                     NTNVAPYSGVTWMGAGTGFVVGNHTIITNKHVTYHMKVGDEIKAHPNGFYNNGGGLYK
                     VTKIVDYPGKEDIAVVQVEEKSTQPKGRKFKDFTSKFNIASEAKENEPISVIGYPNPN
                     GNKLQMYESTGKVLSVNGNIVSSDAIIQPGSSGSPILNSKHEAIGVIYAGNKPSGEST
                     RGFAVYFSPEIKKFIADNLDK"
     gene            3292..3426
                     /locus_tag="O7798_002410"
     CDS             3292..3426
                     /locus_tag="O7798_002410"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500435.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDC2864607.1"
                     /translation="MHYLICIKANQRLIFTNSIVDWFYLCMNEQLFDIIKNINDFESI
                     "
     gene            3590..>3996
                     /locus_tag="O7798_002411"
     CDS             3590..>3996
                     /locus_tag="O7798_002411"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000028656.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I restriction-modification system subunit M
                     N-terminal domain-containing protein"
                     /protein_id="HDC2864608.1"
                     /translation="MSITEKQRQQQAELHKKLWSIANDLRGNMDASEFRNYILGLIFY
                     RFLSEKAEQEYADALSGEDITYQEAWADEEYREDLKAELIDQVGYFIEPQDLFSAMIR
                     EIETQDFDIEHLATAIRKVETSTLGEESENDFIG"
BASE COUNT         1563 a          576 c          712 g         1145 t
ORIGIN      
        1 taaatgtgta tctagataca ttaactataa aaataaattt ggaaggaggt aaaatatgaa
       61 taaaaatgta atggttaaag gtttaactgc tttaactatt ttaacatctc ttggttttgc
      121 tgaaaatatt tctaatcagc ctcattcaat tgccaaagca gaaaagaatg tcaaagaaat
      181 taccgatgca actaaggaac catacaattc agtggtagca tttgtgggtg gtactggtgt
      241 agttgttggt aaaaatacaa tcgtaactaa caaacatatc gctaaaagta atgatatttt
      301 taaaaataga gtatcagcac atcattcgag taaaggtaaa ggcggaggaa actacgacgt
      361 taaagacatt gtagaatatc ccggaaaaga agaccttgcg atagttcatg ttcatgaaac
      421 aagtacagaa ggtttgaatt ttaataagaa cgttagttat acaaaatttg cagacggagc
      481 aaaagtgaaa gatagaattt ctgttattgg ttatccaaag ggtgcacaaa caaaatataa
      541 aatgtttgaa tcgacaggaa cgattaacca tatcagtgga acgtttatgg aatttgatgc
      601 gtatgcacaa ccaggtaatt caggatctcc tgtattgaat tctaaacatg aactgattgg
      661 tattttatat gcaggtagtg gaaaagatga atctgaaaag aatttcggtg tttatttcac
      721 accacaatta aaagaattta ttcaaaataa tattgaaaaa taagtatcat caattcattc
      781 gtgaagttga ttttttaaag agtgattaag aaaacggtta cataattaac taaatatact
      841 gaattatgta tctagatatc aaaataatta aaagagagga acttaaaatg aacaaaaacg
      901 tagtcatcaa gagtttagca gcattaacaa ttttaacatc tgtaacaggt attggaacaa
      961 cattggttga ggaagtacaa caaactgcca aagcagaaaa taatgtcaca aaagttaaag
     1021 atactaatat ttttccatat actggtgtag ttgcttttaa aagtgcaact ggatttgtag
     1081 ttggaaagaa tactatttta acaaataaac atgtgtcgaa aaattacaaa gtgggcgatc
     1141 gtattactgc acatccaaat agtgataaag gtaatggtgg tatttattcg attaaaaaga
     1201 ttattaatta tccaggtaaa gaagatgtat cagtcattca agttgaagag cgtgcaatag
     1261 aacgtggacc aaaaggcttt aattttaatg ataatgtaac gccattcaaa tatgcggcag
     1321 gggctaaagc tggtgagcga attaaagtga ttggttatcc acacccatac aaaaataaat
     1381 atgttttata tgagtcaact ggccctgtga tgtcagtaga aggtagcagt attgtatatt
     1441 cagcgcatac tgaaagcgga aactctggat cacctgtatt aaacagcaac aacgaattag
     1501 ttggtattca ttttgcttct gatgtaaaaa atgatgataa cagaaatgca tatggcgtct
     1561 actttacacc agaaattaaa aaattcattg cagaaaacat agataaataa acaaattgac
     1621 tttaaacgag cgttgcaaca tatctcgaat tgtaaaggag cttgaaaatg aataaaaata
     1681 tagtcattaa aagcatggca gcattagcca ttctaacctc agtaactgga ataaatgctg
     1741 cagtcgttga agagacacaa caaatagcaa atgcagagaa gaatgttacg caagttaaag
     1801 atacaaatat ttttccatat aatggcgtcg tttcatttaa agatgcgaca ggttttgtaa
     1861 ttggaaaaaa tacaattatc accaataaac atgtatcaaa agattataaa gttggcgata
     1921 gaattactgc ccatccaaac ggtgacaaag gaaatggtgg tatatataaa attaaaagca
     1981 tttctgatta tccgggtgat gaagacatct ctgtcatgaa tattgaagaa caagcagtcg
     2041 aacgtggacc aaaaggcttt aattttaatg aaaatgtcca agcattcaat tttgcgaaag
     2101 atgctaaagt tgatgacaaa attaaagtta ttggttaccc attacctgct caaaatagtt
     2161 ttaaacagtt tgaatctaca ggaactataa aaagaatcaa agacaatatt ttaaattttg
     2221 atgcatacat tgaacccggg aattcaggat caccagttct aaattctaac aatgaggtca
     2281 taggtgtggt gtatggcggt attggaaaaa ttggttctga atataatggt gccgtatact
     2341 ttacgcctca aatcaaagat tttattcaaa agcacattga acaataaaca aatttaaata
     2401 tacaccatga gcatgtgttc aataatttta atgaaaaaca tcggtcgaat ataacataaa
     2461 aaaacgtcta tatcaaaagc atcatgaata aacagaggag cagaaaaatg aataaaaata
     2521 taatcatcaa aagtattgca gcattgacga ttttaacatc aataactggt gtcggcacaa
     2581 caatggttga aggtattcaa caaacagcca aagccgaaaa tactgttaaa caaattacaa
     2641 atacaaatgt tgcaccatac agtggtgtta catggatggg cgctggaaca ggatttgtag
     2701 ttggaaatca tacaatcatt accaataaac atgttaccta tcacatgaaa gtcggtgatg
     2761 aaatcaaagc acatcctaat ggtttttata ataacggtgg tggactttat aaagttacta
     2821 agattgtaga ttatcctggt aaagaagata ttgcggttgt acaagttgaa gaaaaatcaa
     2881 cacaaccaaa aggtagaaaa ttcaaagatt tcactagtaa atttaatata gcatcagaag
     2941 ctaaagaaaa tgaacctata tcagtcattg gttatccaaa tcctaatgga aataaactac
     3001 aaatgtatga atcaactggt aaagtattat cagtgaatgg gaatatagtg tcatcggatg
     3061 caattattca gcctggtagc tctggttcac ctatattaaa tagtaaacac gaagctattg
     3121 gtgtaatcta tgccggtaat aagccatcag gtgaaagcac aagaggattt gctgtttatt
     3181 tctctcctga aattaagaaa ttcattgcag ataatttaga taaataatta aaacttagac
     3241 attcacccaa tcctgacaaa atatactata actaacattt attaatatat attgcattat
     3301 ttaatatgca tcaaagccaa tcaacgattg attttcacca actcaattgt tgattggttt
     3361 tatttatgta tgaatgaaca actttttgac atcattaaga atataaatga ttttgaaagc
     3421 atttgaaagc tacaacattt ctataaaatt tttcaataac aattgcgcca ctaaaactca
     3481 aaatttccac caccaacatc caaattatca acatcgcaac ataaccaaat gttataataa
     3541 atctattaca caaagagata aattacttat gcaaaggcgg aggaatcaca tgtctattac
     3601 tgaaaaacaa cgtcagcaac aagctgaatt acataaaaaa ttatggtcga ttgcgaatga
     3661 tttaagaggg aacatggatg cgagtgaatt ccgtaattac attttaggct tgattttcta
     3721 tcgcttctta tctgaaaaag ccgaacaaga atatgcagat gccttgtcag gtgaagacat
     3781 cacgtatcaa gaagcatggg cagatgaaga atatcgtgaa gacttaaaag cagaattaat
     3841 tgatcaagtc ggttacttca ttgagccaca agatttattc agtgcgatga ttcgtgaaat
     3901 tgaaacgcaa gatttcgata tagaacatct agcgacggcg attcgcaaag ttgaaacatc
     3961 tacattaggt gaagaaagtg aaaatgactt tatcgg
//
LOCUS       DALPQQ010000161         3940 bp    DNA     linear   BCT 22-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus strain K18-6-464
            SAMD00233528-rid16434743.denovo.162, whole genome shotgun sequence.
ACCESSION   DALPQQ010000161 DALPQQ010000000
VERSION     DALPQQ010000161.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMD00233528
            Sequence Read Archive: DRR236061
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 3940)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3940)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001543423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001543423.1
            Genome Coverage       :: 77x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/22/2022 17:09:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,811
            CDSs (total)                      :: 2,743
            Genes (coding)                    :: 2,689
            CDSs (with protein)               :: 2,689
            Genes (RNA)                       :: 68
            rRNAs                             :: 2, 4, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 4, 2 (16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 54
            CDSs (without protein)            :: 54
            Pseudo Genes (ambiguous residues) :: 0 of 54
            Pseudo Genes (frameshifted)       :: 27 of 54
            Pseudo Genes (incomplete)         :: 27 of 54
            Pseudo Genes (internal stop)      :: 10 of 54
            Pseudo Genes (multiple problems)  :: 10 of 54
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3940
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMD00233528-rid16434743.denovo.162"
                     /strain="K18-6-464"
                     /db_xref="taxon:1280"
                     /geo_loc_name="Japan: Niigata"
     gene            complement(65..304)
                     /locus_tag="O7798_002412"
     CDS             complement(65..304)
                     /locus_tag="O7798_002412"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500937.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDC2864609.1"
                     /translation="MCVVIMRDVGLIDVEDCYDIFGMWCLVNGGLKLSFYGGLKMLFY
                     VGLEFVVLWRYKKPQQDLDLTVTYTFHTYIYRLVL"
     gene            537..2201
                     /gene="alsS"
                     /locus_tag="O7798_002413"
     CDS             537..2201
                     /gene="alsS"
                     /locus_tag="O7798_002413"
                     /EC_number="2.2.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500936.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetolactate synthase AlsS"
                     /protein_id="HDC2864610.1"
                     /translation="MTDKKYTAADMVIDTLKNNGVEYVFGIPGAKIDYLFNALIDDGP
                     ELIVTRHEQNAAMMAQGIGRLTGKPGVVLVTSGPGVSNLTTGLLTATSEGDPVLALGG
                     QVKRNDLLRLTHQSIDNAALLKYSSKYSEEVQDPESLSEVMTNAIRIATSGKNGASFI
                     SIPQDVISSPVESKAISLCQKPNLGVPSEQDINDVIEAIKNASFPVLLAGMRSSSAEE
                     TNAIRKLVERTNLPVVETFQGAGVISRELENHFFGRVGLFRNQVGDELLRKSDLVVTI
                     GYDPIEYEASNWNKELETQIINIDEVQAEITNYMQPKKELIGNIAKTIEMISEKVDEP
                     FINQQHLDELEQLRTHIDEETGIKATHEEGILHPVEIIGSMQKVLTDDTTVTVDVGSH
                     YIWMARNFRSYNPRHLLFSNGMQTLGVALPWAISAALVRPNTQVVSVAGDGGFLFSSQ
                     DLETAVRKNLNIIQLIWNDGKYNMVEFQEEMKYKRSSGVDFGPVDFVKYAESFGAKGL
                     RVTNQEELEAAIKEGYETDGPVLIDIPVNYKDNIKLSTNMLPDVFN"
     gene            2238..2942
                     /gene="budA"
                     /locus_tag="O7798_002414"
     CDS             2238..2942
                     /gene="budA"
                     /locus_tag="O7798_002414"
                     /EC_number="4.1.1.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500935.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetolactate decarboxylase"
                     /protein_id="HDC2864611.1"
                     /translation="MTNVLYQHGTLGTLMAGLLKGTASINELLQHGDLGIATLTGSNG
                     EVIFLDGKAYHANEHKEFVELKGDELTPYATVTKFVADTSYETKDKSSEAVFAEIKEK
                     MLSENLFSAVKISGLFKKMHVRMMPAQEPPYTRLIDSARRQPEQTETYVKGSVVGFFT
                     PELFHGIGSAGFHVHFANDDRNFGGHVLDFEVEDVKVEIQNIETFEQHFPIQDKDFTK
                     ANIDYKDIADEIREAE"
     gene            complement(3306..3731)
                     /locus_tag="O7798_002415"
     CDS             complement(3306..3731)
                     /locus_tag="O7798_002415"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000769702.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MAP domain-containing protein"
                     /protein_id="HDC2864612.1"
                     /translation="MKLKSFVTATLALGLLSTVGAALPSHEASADSNNGYKEMTVDGY
                     HTVPYTISVDGITALHRTYFIFPENKNVLYQEIDSKVKNELASQRGVTTEKINNAQTA
                     TYTLTLNDGNKKVVNLKKNDDAKNSIDPSTIKQIQIVVK"
BASE COUNT         1401 a          587 c          688 g         1264 t
ORIGIN      
        1 acttttctat atatttaatg agtatcttct taatttgttt aggaactgct tctatcattt
       61 ataactataa aaccaatcga taaatataag tatgaaatgt ataagtcaca gttagatcta
      121 agtcttgctg tggcttttta tatctccata aaacgacaaa ttcaagcccg acataaaaca
      181 gcattttcag cccaccataa aacgacaatt tcagcccgcc attgactaaa caccacatcc
      241 caaaaatatc gtaacaatcc tctacatcaa tcaatccaac atccctcata atcacaacgc
      301 acaaaatcta ttcatgcatt tttggaatac ttagtattac aaataacgat ttttattcat
      361 ctaacaaagg ttatataatg tactgaaggc aatttttatg tattacaaat ctaatcgtac
      421 atgtaaaatt ttgataaaca tcattaattt tgcgtaacta tcattagatt acaaatcaca
      481 aagtaattac atgtaataca catctataca tcacatttga agggaaatga atataaatga
      541 ctgataaaaa gtacactgca gccgatatgg ttattgatac tttgaaaaat aatggggtag
      601 aatatgtttt tggtattccg ggtgcaaaga ttgactatct atttaatgct ttaattgatg
      661 atggtcctga acttattgtc actcgtcatg aacaaaacgc cgcaatgatg gcgcaaggta
      721 ttggaagatt aacaggcaaa ccgggtgtag tacttgttac aagtggtcct ggtgtaagta
      781 atttaactac tggattatta accgcaacat ctgaagggga tcctgtatta gcgttaggtg
      841 gccaagtgaa acgtaatgat ttattacgat taacgcatca aagtattgat aatgctgcgc
      901 tattaaaata ttcatcaaaa tatagtgaag aagtacaaga tcctgaatca ttatcagaag
      961 ttatgacaaa tgcaattcga attgctactt caggaaaaaa tggcgcaagt tttattagta
     1021 ttccgcaaga cgttatttct tcaccagttg aatctaaagc tatatcactt tgccaaaaac
     1081 caaatttagg agtaccgagt gaacaagata ttaatgatgt cattgaagcg attaaaaatg
     1141 catcatttcc tgttttatta gctggtatga gaagttcaag tgcagaagaa acaaatgcca
     1201 ttcgcaaatt agttgagcgc acgaatttac cagttgtaga aacattccaa ggtgcaggtg
     1261 taattagtcg tgaattagaa aatcatttct tcggtcgtgt gggcttattc cgcaatcaag
     1321 ttggtgatga attattacgt aaaagtgatt tagttgttac aatcggttat gatccaattg
     1381 aatacgaagc tagtaactgg aataaagaat tagaaacaca aattatcaat attgacgaag
     1441 ttcaagctga aattactaat tatatgcaac cgaaaaaaga gttgattggt aatattgcta
     1501 aaacgattga aatgatttct gaaaaagtgg atgagccatt tataaatcaa caacatttag
     1561 acgaattaga acaattaaga acacatattg atgaagaaac tggtattaaa gcgacgcatg
     1621 aagaaggaat tctacatcca gtggaaatta ttggatctat gcaaaaggta ttaactgatg
     1681 atactactgt aacagttgat gttggaagtc actatatttg gatggcacgt aatttcagaa
     1741 gttacaatcc aagacattta ttatttagca atggtatgca aacgcttggt gtagcattac
     1801 cgtgggcaat ttcagctgca cttgtgcgcc ctaatacgca agttgtgtcc gttgctggcg
     1861 atggtggctt tttattttca tcacaagatt tagaaacggc cgtacgtaaa aatttaaata
     1921 tcatccagct tatttggaat gatggaaaat ataacatggt tgaattccaa gaagaaatga
     1981 aatataaacg ttcgtcaggt gtagacttcg gtcctgtaga ttttgtaaaa tatgcagaat
     2041 catttggcgc gaaaggttta cgagttacta atcaagaaga attagaagcg gcaattaaag
     2101 agggctatga aacagatggt ccagtattaa ttgatatacc tgtaaattac aaagataata
     2161 tcaaactttc aacaaatatg ttacctgacg tatttaacta aaataaagat aaatgttaaa
     2221 gaggagtggg agattttatg actaatgttt tataccaaca tggtacatta ggcacattaa
     2281 tggcaggatt attaaaagga actgcatcaa taaatgaatt attgcaacat ggtgacttag
     2341 gtatcgctac actaacaggt tcaaacggtg aggtaatctt tttagatgga aaagcttacc
     2401 atgcaaatga acataaagaa tttgtagaat taaaaggtga cgagttaaca ccatatgcaa
     2461 ctgtaactaa atttgtagca gatacaagct atgaaacgaa agataaatct tcagaagcag
     2521 tttttgcaga aattaaggaa aagatgttga gtgaaaattt attttcagca gtaaaaattt
     2581 caggcttatt taaaaaaatg catgtacgta tgatgccggc tcaagaacca ccttatacac
     2641 gtttaatcga ttcagctaga agacaacctg aacaaactga aacgtatgtc aaaggttcag
     2701 tcgttggttt ctttacacca gaattattcc atggtatcgg atcagcagga tttcatgtac
     2761 actttgcgaa tgatgatcgt aactttggtg gacatgtctt agattttgaa gtagaagatg
     2821 ttaaagtaga aatccaaaat atagaaacat ttgaacagca ttttccaatt caagataaag
     2881 atttcactaa agcaaatatt gactataaag atattgcaga cgaaattaga gaagctgaat
     2941 aatgaatcca gaaatataat gacggtttat gaaaattgac ttcataatgc gcgatttaga
     3001 aatgatagtt tgtaaatatg attaaccatg actacaatag aacaaatata tttataatta
     3061 cgtctaagta ataaaataaa tcccttcact attagcagta gtgaggggat ttattaggtt
     3121 ccagatattt gagatttgct gttatgttta gattataaat tgtggtacac actcatataa
     3181 aatttactat tgtataggcc aatctgttac tacgagaagc aaacaacaat aatttacaag
     3241 ttcaataact aaaaagacaa acgccaattt ttcagcgctt gccctataaa actattttca
     3301 aattattatt taactacaat ttgtatctgt ttgattgtac ttggatcaat tgaattttta
     3361 gcgtcgtcat ttttctttag attcactact tttttattac catcattcaa agtaagcgta
     3421 taagttgctg tttgggcatt attaattttt tctgttgtaa caccacgttg agaagctaat
     3481 tcatttttta ctttactgtc aatttcttga taaagaacat ttttattttc tgggaagata
     3541 aagtaagttc gatgtaatgc agtaatacca tctactgaaa ttgtgtaagg aacagtgtga
     3601 taaccatcca cagtcatttc tttatagccg ttattactat ctgcagatgc ttcgtgactc
     3661 ggtaatgcag ctccgaccgt tgataataat cccaatgcta aagtggcagt aacaaatgat
     3721 tttagtttca tatctcaatc tccttttcgg gttgtatgat attacactat ttgtataaca
     3781 cgtttcataa agtttaaaac atactttttg cattttttat attttaattt ttagtaatag
     3841 tttttaacga gggatatgac tcgtgcattt tgaaaagtgg taagcaatgt ttttagttta
     3901 tagggattga ttagttgtat ataataatca tgaaaagcat
//
LOCUS       DALPQQ010000162         3897 bp    DNA     linear   BCT 22-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus strain K18-6-464
            SAMD00233528-rid16434743.denovo.163, whole genome shotgun sequence.
ACCESSION   DALPQQ010000162 DALPQQ010000000
VERSION     DALPQQ010000162.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMD00233528
            Sequence Read Archive: DRR236061
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 3897)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3897)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001543423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001543423.1
            Genome Coverage       :: 77x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/22/2022 17:09:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,811
            CDSs (total)                      :: 2,743
            Genes (coding)                    :: 2,689
            CDSs (with protein)               :: 2,689
            Genes (RNA)                       :: 68
            rRNAs                             :: 2, 4, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 4, 2 (16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 54
            CDSs (without protein)            :: 54
            Pseudo Genes (ambiguous residues) :: 0 of 54
            Pseudo Genes (frameshifted)       :: 27 of 54
            Pseudo Genes (incomplete)         :: 27 of 54
            Pseudo Genes (internal stop)      :: 10 of 54
            Pseudo Genes (multiple problems)  :: 10 of 54
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3897
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMD00233528-rid16434743.denovo.163"
                     /strain="K18-6-464"
                     /db_xref="taxon:1280"
                     /geo_loc_name="Japan: Niigata"
     gene            <1..112
                     /locus_tag="O7798_002416"
     CDS             <1..112
                     /locus_tag="O7798_002416"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000148374.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="DNA primase"
                     /protein_id="HDC2864613.1"
                     /translation="QCNVDIEPLRVLIGDNKNGDVFTERDWEATVRSASR"
     gene            99..371
                     /locus_tag="O7798_002417"
     CDS             99..371
                     /locus_tag="O7798_002417"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001149387.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pathogenicity island protein"
                     /protein_id="HDC2864614.1"
                     /translation="MQAVKEDYNLDEQAQRIGLITGISNEIYYCSISYLSTVYLEYID
                     NTWTAWRESYIPKLNKRTSYKVIASGSFELVLARLKSYLNYIKRSK"
     gene            373..1014
                     /locus_tag="O7798_002418"
     CDS             373..1014
                     /locus_tag="O7798_002418"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012990921.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pathogenicity island protein"
                     /protein_id="HDC2864615.1"
                     /translation="MNIETIVNQFETRAGTLLRYYTGLLEHSKVQPCCFKLYNDPFDM
                     VYVMMNGKLFGHVYIKDCKVRQSFELASPKHTEGLIRSIEGHYVGYELHDGKQLSISD
                     MMASQLFEDEYFMYGLQTYAESNNSDVFEYLENGFDTDTLEGIQSSNTDVIANIEMLY
                     QLATGINEPAPELVEVLRLVTEFVQDENATQEDYKALECKLNNLKASYYSLSK"
     gene            1361..1702
                     /locus_tag="O7798_002419"
     CDS             1361..1702
                     /locus_tag="O7798_002419"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001668138.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pathogenicity island protein"
                     /protein_id="HDC2864616.1"
                     /translation="MQGIVEKETYHLPTEHLQVFNVIKNTSNKYITKTKILNQLGYEY
                     NSSNERWLRKVINSLVYDYGYPIGCSYKPSERGYYIITTEQEKQQAMISIKKLADGSM
                     KRYEALKRIEV"
     gene            1714..2292
                     /locus_tag="O7798_002420"
     CDS             1714..2292
                     /locus_tag="O7798_002420"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000846286.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pathogenicity island protein"
                     /protein_id="HDC2864617.1"
                     /translation="MKTESYFKEYNQFVLDQRKAIQELEQERNALESKIKLDKSTYKQ
                     LIMDGQDDKADNLYQGTDADEKKLKALNKRLETKKSVSKEVKYQKTIELLKHQSELSS
                     LYESEKQSALGKLKKVVDAYNEIIDEIEDINDRYEDEHQQYASIYSQEQLYDDKEARE
                     ALNGYFRENIFTSYINGNDLPYEHNNKLFLKR"
     gene            2310..2528
                     /locus_tag="O7798_002421"
     CDS             2310..2528
                     /locus_tag="O7798_002421"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001662729.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="capsid morphogenesis B protein"
                     /protein_id="HDC2864618.1"
                     /translation="METKYELNNTKKVANAFGLNEEDTNLLINAVDLDIKNNMQEISS
                     ELQQSEQSKQKQYGTTLQNLAKQNRIIK"
     gene            2579..3106
                     /locus_tag="O7798_002422"
     CDS             2579..3106
                     /locus_tag="O7798_002422"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017804627.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="spore coat protein"
                     /protein_id="HDC2864619.1"
                     /translation="MKLLKTKNCLYYRNGDNKLSDYQLLTQFNPAFINKKIKMCEFQI
                     ESMYHMSASTTTCDEIMGVVSVSYPIEKLVIKIIETKAGLQNYKNRSISNMVLLKTVL
                     NHYTEKEQKQVVKYMRSNGRYKPYNVIERLQVDLYQASIKQRSERQKQRNTAIENSKI
                     ARVNEYHQSSYVKVV"
     gene            3109..3450
                     /locus_tag="O7798_002423"
     CDS             3109..3450
                     /locus_tag="O7798_002423"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000358773.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pathogenicity island protein"
                     /protein_id="HDC2864620.1"
                     /translation="MDKKQIKDFVCDYHKRTRSDVLIDDEINTDEFFSIGDENSNEWM
                     ADDNIDDHIVKNHLEMIVDQVANDKEFYIFDSLIQGRSFKDISNVLECSEQSVRLWYE
                     TLLDKIVEVIE"
     gene            3447..>3897
                     /locus_tag="O7798_002424"
     CDS             3447..>3897
                     /locus_tag="O7798_002424"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500733.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="terminase small subunit"
                     /protein_id="HDC2864621.1"
                     /translation="MSELTAKQARFVNEYIRTLNVTQSAIKAGYSANSAHVTGCRLLK
                     KPHIKQYIQEQKDKVIDENVLTAKELLHVLTNAAVGDETETKEVVVKRGEYKENPQSG
                     KVQLVYNEHVELVEVPIKPSDRLKARDMLGKYHKLFTEKHDKNGNVPI"
BASE COUNT         1538 a          472 c          781 g         1106 t
ORIGIN      
        1 tcaatgtaac gtagatattg agccgttacg tgtattgatt ggagataata aaaacggcga
       61 tgtatttacg gagagagatt gggaggcgac tgttagaagt gcaagccgtt aaagaggatt
      121 acaatttaga cgaacaagct caaaggattg gtttaataac tggtatatct aacgaaatat
      181 actattgttc aataagttat ttatcaacgg tttatttaga atatattgat aacacttgga
      241 ctgcatggcg tgagagttat attcctaaat taaataaaag aacaagttac aaagttatag
      301 cttcaggaag ttttgaatta gtgctagcta gattaaagag ttatttaaat tatataaaaa
      361 ggagtaagtg atatgaacat agaaactatt gtaaaccaat ttgaaacacg agcaggcacg
      421 ttactaaggt actacacagg attattagaa catagtaaag tgcaaccgtg ttgctttaag
      481 ttatacaatg atccatttga tatggtttat gtgatgatga atgggaagtt attcggtcat
      541 gtatatatta aagattgtaa agtaaggcaa tcatttgaat tagcgtcacc taagcacact
      601 gaggggctta taagaagtat agaaggtcat tatgtaggtt atgaattaca tgacggtaaa
      661 cagctttcta ttagtgatat gatggccagt caattatttg aagatgagta ttttatgtat
      721 ggattacaaa catatgcaga atcaaataat agtgatgtgt ttgagtacct agaaaatgga
      781 tttgataccg atacacttga gggcattcaa tcgagtaata ctgatgtgat agcgaatatt
      841 gaaatgttgt atcagttagc tacaggaatc aatgaaccag caccagagtt agttgaggtg
      901 ttgagattag taactgagtt tgtacaagat gagaatgcga cacaagagga ttacaaggct
      961 ttagaatgta aattgaataa tctaaaagcg tcttactata gcttgagtaa ataatgttat
     1021 gaggggtcac atgtagtgtg tggctcctaa taaaaataat aaggttatag caatgtatac
     1081 gaattttggt gatgctaata caagctaaag tttgtgtttt tggtatagtc taaaagttaa
     1141 gtttgttcgc aatttgttcg ctctattata tcgaacttaa gttctgtatt gctgtgatgt
     1201 aaaaggctct ttattaatta tttaatgtgg ttttataagc gttatatgcg acaagctaaa
     1261 caactgataa aacgcgactc aaagcgaacg taagtttgtt ttagacctgt aaaaatggta
     1321 taatttaggt atggaataat caaaagaaag aggtgtagaa atgcaaggta tcgtagaaaa
     1381 agagacgtat catttaccca ccgaacacct gcaagttttc aatgtgataa aaaatacgtc
     1441 caataagtat attactaaaa ctaaaatctt aaatcaatta ggatatgaat ataattcaag
     1501 caatgaacga tggttaagaa aagtaatcaa ttcattagta tatgattatg gctatcctat
     1561 cggatgtagt tataaaccta gtgaacgtgg ttactacatt attacgacag aacaagaaaa
     1621 gcaacaagcg atgataagta ttaaaaagct agctgatggc agtatgaaac gctatgaagc
     1681 tttgaaacga attgaagtgt aaaggggata aaaataaaaa ctgaatcgta ctttaaagaa
     1741 tacaaccaat ttgtattaga tcaacgcaag gctatacaag aattggaaca agagcgtaat
     1801 gcattggaaa gtaaaataaa gttagataag tccacataca aacagttaat catggatgga
     1861 caagatgaca aggcagataa cctatatcaa ggaacagatg ctgatgaaaa gaaactaaaa
     1921 gcacttaata aacgcttaga gacaaagaaa agtgtatcga aagaagttaa atatcaaaag
     1981 acaattgagt tattaaaaca tcaaagcgag ttgtcatcat tatatgaatc agaaaaacaa
     2041 tcagctttag gtaaattaaa aaaggtagtc gatgcatata atgagatcat tgatgaaata
     2101 gaagatatta atgatagata tgaagatgag catcagcaat atgcgagtat ttatagtcaa
     2161 gaacaattat atgatgataa agaggctagg gaagcattga atggctactt tagagaaaat
     2221 atatttacat catatattaa tggtaatgat ttgccatacg aacacaataa caagttgttt
     2281 ttaaaacgtt aaaaagaaag ggtaattaaa tggaaacaaa atacgagtta aataatacta
     2341 aaaaggtcgc aaatgcattt ggtttaaatg aagaagatac aaatctatta ataaatgcag
     2401 ttgatttgga tattaaaaac aatatgcagg agatttcaag tgagttacaa caatcagaac
     2461 agtctaagca aaagcaatat ggtacaacgc tacaaaattt agctaagcaa aacaggatta
     2521 ttaaatagca atgattgcct atccaattcg ggtaggctct gtttataggg gtgaataaat
     2581 gaaactgctt aaaacgaaga attgtttata ttatcgtaat ggtgacaata aattatctga
     2641 ttatcaacta ttaacgcaat ttaacccagc atttattaat aagaaaatta agatgtgtga
     2701 attccaaatt gaaagtatgt accatatgag tgcgtcgacc acaacatgtg atgaaataat
     2761 gggggtcgtg tctgtctcat atccgattga aaaattagtt atcaaaatta ttgaaacaaa
     2821 agcagggtta caaaactata aaaatcgatc tataagtaat atggtgttgt tgaaaacggt
     2881 actaaatcat tatacagaaa aagagcagaa gcaagttgta aaatatatgc gttcaaatgg
     2941 acgatataag ccctacaacg tcattgaacg cttacaagtt gatttgtatc aagcaagtat
     3001 taaacaacgt tcagaacgtc aaaaacaaag aaatacagca attgaaaaca gtaagattgc
     3061 acgagtaaat gaatatcacc aatcttcata tgtaaaagtg gtgtaacaat ggataaaaag
     3121 caaataaaag acttcgtttg tgattatcat aagcgaacta gaagtgatgt gttgatagat
     3181 gatgaaataa ataccgatga attcttttca ataggtgatg aaaattctaa tgaatggatg
     3241 gcagacgata acattgatga tcatattgta aagaatcact tagaaatgat tgttgaccaa
     3301 gtagctaatg ataaagagtt ttatattttc gattctttaa tacaaggacg tagttttaaa
     3361 gatattagca atgtcttaga gtgttcagaa caatctgtaa gattatggta tgaaacctta
     3421 ttagataaaa ttgtggaggt gatagaatga gtgagttaac ggcaaaacaa gcgcgttttg
     3481 tgaatgagta tataagaaca cttaatgtaa cacaaagtgc cataaaagca ggctatagcg
     3541 caaatagcgc acatgtgaca gggtgtaggt tattgaagaa gccacacatc aagcaatata
     3601 tacaagaaca aaaagataag gttatagatg agaatgtatt aaccgcaaaa gagttactac
     3661 atgtgcttac gaatgcggca gtcggtgatg aaacagaaac gaaagaagtt gtggtcaaac
     3721 gtggagaata taaagagaat ccacaaagtg gcaaagtaca gttagtctat aacgaacatg
     3781 ttgaactggt agaggtgcca attaagccaa gtgatcgttt aaaagctcgt gatatgttgg
     3841 gtaaatacca taagttattt acagaaaagc atgataaaaa cggtaatgta cctatat
//
LOCUS       DALPQQ010000163         3877 bp    DNA     linear   BCT 22-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus strain K18-6-464
            SAMD00233528-rid16434743.denovo.164, whole genome shotgun sequence.
ACCESSION   DALPQQ010000163 DALPQQ010000000
VERSION     DALPQQ010000163.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMD00233528
            Sequence Read Archive: DRR236061
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 3877)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3877)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001543423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001543423.1
            Genome Coverage       :: 77x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/22/2022 17:09:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,811
            CDSs (total)                      :: 2,743
            Genes (coding)                    :: 2,689
            CDSs (with protein)               :: 2,689
            Genes (RNA)                       :: 68
            rRNAs                             :: 2, 4, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 4, 2 (16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 54
            CDSs (without protein)            :: 54
            Pseudo Genes (ambiguous residues) :: 0 of 54
            Pseudo Genes (frameshifted)       :: 27 of 54
            Pseudo Genes (incomplete)         :: 27 of 54
            Pseudo Genes (internal stop)      :: 10 of 54
            Pseudo Genes (multiple problems)  :: 10 of 54
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3877
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMD00233528-rid16434743.denovo.164"
                     /strain="K18-6-464"
                     /db_xref="taxon:1280"
                     /geo_loc_name="Japan: Niigata"
     gene            269..376
                     /locus_tag="O7798_002425"
                     /pseudo
     CDS             269..376
                     /locus_tag="O7798_002425"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000649608.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="Csa1 family protein"
     gene            488..1282
                     /locus_tag="O7798_002426"
     CDS             488..1282
                     /locus_tag="O7798_002426"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501243.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tandem-type lipoprotein"
                     /protein_id="HDC2864622.1"
                     /translation="MIHSKKLTLGICLVLLIILIVGYVIMTKTNGRNAQIKDTFNQTL
                     KLYPTKNLDDFYDKEGFRDQEFKKGDKGTWIVNSEMVIEPKGKDMETRGMVLYINRNT
                     RTTKGYYFISEMTDDSNGRPKDDEKRYPVKMEHNKIIPTKPLPNDKLKKEIENFKFFV
                     QYGNFKDINDYKDGDISYNPNVPSYSAKYQLNNDDYNVQQLRKRYDIPTKQAPKLLLK
                     GDGDLKGSSVGSRSLEFTFVENKEENIYFTDSVQYTPSEDTRYESN"
     gene            complement(1286..1408)
                     /locus_tag="O7798_002427"
     CDS             complement(1286..1408)
                     /locus_tag="O7798_002427"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501242.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDC2864623.1"
                     /translation="MSYIIKFTFKFFEMATYISQLTLDIELVSSELLVILPGFI"
     gene            1843..2034
                     /locus_tag="O7798_002428"
     CDS             1843..2034
                     /locus_tag="O7798_002428"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501241.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDC2864624.1"
                     /translation="MRKEIEALIFSDVSSYDIYVNTGVNQGLIGDIKDGYLTIDSMPY
                     IDAERLYHFAMERKSLVTN"
     gene            complement(2173..2358)
                     /locus_tag="O7798_002429"
     CDS             complement(2173..2358)
                     /locus_tag="O7798_002429"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501240.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDC2864625.1"
                     /translation="MLYILITALNVILNKLKMKDSNIISFIYSRHDRILYVNLVGNRF
                     KNNISMTKATSNIGRGF"
     gene            complement(2294..2575)
                     /locus_tag="O7798_002430"
     CDS             complement(2294..2575)
                     /locus_tag="O7798_002430"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501239.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="single-stranded DNA-binding protein"
                     /protein_id="HDC2864626.1"
                     /translation="MTYHERVLALRAESKRTAFDFRFEDLFSKEEWLSMSLAERQKAE
                     KAFRHEVKNMDDVRMPFSSVHDAQVKLYNVVYSYNGIKRNFKQVENEGF"
     gene            2864..3559
                     /locus_tag="O7798_002431"
     CDS             2864..3559
                     /locus_tag="O7798_002431"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501238.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HDC2864627.1"
                     /translation="MTVLTDKVAVVTGAGSGIGEAIATLLHEEGAKVVLAGRNKEKLQ
                     NVANQLSQDSVKVVPTDVTNKEEVDELIKIAQQTFGGLDIVINSAGQMLSSKITDYQV
                     DEWDSMIDVNIKGTLYTAQAALPTMLEQSSGHLINIASISGFEVTKSSTIYSATKAAV
                     HTITQGLEKELAKTGVKVTSISPGMVDTAITAAYNPTDRKKLEPQDIAEAVLYALTQP
                     KHVNVNEITVRPV"
BASE COUNT         1429 a          530 c          675 g         1243 t
ORIGIN      
        1 gaattatata gttcataatt tcgactataa gtggctatta gccattattt ttcgggatct
       61 atgtcaaatc ggactaatga attcaataat ggaagttaag caaccaatct ttgtttaact
      121 tcttttttat tttttggaaa ataaagtttt gaacataata aaatttgatt atgttttaac
      181 gaattttgat gtttcttgaa ctatatatca tctagtcgtc atttacaatt ggtaaatatg
      241 acttcaaact gtatgaaggt gatggcgatt aaaaggctca tccgtaggtt ctaaagaact
      301 agaatttaac tttataagaa ataaagaaga aaatgtgtat ttttctgata gtattaattt
      361 caaacctact gaatagggtt aatagaagtt tgaaataaaa atttcataaa gtgttcaaaa
      421 taatttttcg ctttagttgt aaatattaaa aactgagtca atattaaaaa tataaggtgg
      481 agaaatgatg attcattcaa agaaattaac gctcggtata tgcttggtat tactcattat
      541 attgattgta ggttatgtca ttatgacaaa aacaaatggt cgaaacgccc aaattaaaga
      601 cacatttaat caaacattaa aattatatcc aaccaaaaat ctcgatgatt tttacgataa
      661 agaaggcttt cgagatcaag aatttaaaaa gggtgataaa ggtacttgga tagttaattc
      721 tgaaatggta atcgagccaa aaggtaagga tatggaaacg agaggaatgg tgctctatat
      781 caatcgcaat actagaacca caaaagggta ttattttata agtgaaatga cagatgacag
      841 taacggcaga ccaaaggatg atgaaaaaag gtatccggta aaaatggaac ataataaaat
      901 cataccaacg aagccactac cgaatgacaa gttaaaaaaa gagattgaaa actttaagtt
      961 ctttgtacaa tatggcaact ttaaagatat taatgattat aaagatggtg atatttcata
     1021 taatcctaat gtaccaagtt attcggcaaa atatcaattg aataatgatg attataatgt
     1081 ccaacagtta agaaaaagat atgatattcc aaccaaacaa gcgccgaaac tattattgaa
     1141 aggcgatgga gatttaaaag gttcatccgt aggttctaga agtcttgaat ttacctttgt
     1201 cgaaaataaa gaagaaaaca tttattttac agattctgta caatatactc caagtgagga
     1261 tacaaggtat gagtcaaact gaatatcaaa taaaacctgg taatataaca agtaactctg
     1321 aagaaacaag ttcgatatct aaagtgagct gtgaaatata ggtagccatt tcaaaaaatt
     1381 taaaggtgaa tttgataatg tagctcaagg agattgggtt aaaaaggcga agaatgaact
     1441 ggatgatatt agtaagaaat taaaaaatat tcaaagaacg gaagtttaat agcttatatg
     1501 attcttggag ctaagacagc atgcgttcat tcatgccatt attaatataa gcaccgcaac
     1561 aaaaaagctt ctaatgtgat acaggaacct catattccgt atcatgttag aagcttttaa
     1621 tgtctaaaga acatctacat tttatcatat tttctgactt attaaacttt tatataatta
     1681 aatatttctt aattttccaa aatagtgata aatttgtgaa atacatcaca aatcccttta
     1741 tttatttgga aattcatgta atattagact tgtaagaagt taataaatag agagagacga
     1801 gagagtttat ataaatacta tataaacatt ggagtgatga ttatgagaaa agagattgaa
     1861 gcgcttattt tctcagacgt aagtagctat gatatttacg tgaacactgg tgtaaatcaa
     1921 ggattaattg gtgacatcaa agatggttac ctaactattg attctatgcc ttacattgat
     1981 gctgagcgtt tgtatcactt tgctatggaa cgtaaatcgt tagtcactaa ctagttctta
     2041 ttgccaatga ttactacccc tagtcggcgg caattgaagt gtgattgatg taacttgccc
     2101 tcgttggtga gcaattgagg gcagacccct ttaattaagt aaaccctaac tccccacaaa
     2161 tctggaacga tactaaaagc cacgtcctat attggatgtg gctttagtca tacttatatt
     2221 atttttaaaa cgattaccta caagatttac atataaaatt ctatcatgtc tgctatatat
     2281 aaacgaaatg atattagaat ccttcatttt caacttgttt aaaattacgt ttaatgccgt
     2341 tataagaata tacaacatta tataatttta cttgggcgtc atggacactt gagaagggca
     2401 ttcttacatc gtccatattt ttaacttcgt gtcgaaatgc tttttcagct ttttgtcttt
     2461 ctgcaagaga catacttagc cattcttctt tgctaaataa atcttcgaat cgaaaatcaa
     2521 atgcggttct tttactttct gctcttaatg ctaaaacacg ctcatgatat gtcacgtttt
     2581 attcctccct ctaatcattc aatcgaatga taaatcacag tattaacttt attactaata
     2641 taatgttttt acaataaaga agtgacgatt tttcaacatt tttaaaaata aaaaatataa
     2701 gcaacgatta attgtatgtt tcgaatggct tgtaatgtaa tttatctatg aaaatgaagc
     2761 gagttattat gaccgttata tgaattgtga tacgcttttt aaaagtaata tgtatttatg
     2821 atttaccctg aaaaaataaa aagaatcaaa ggagtcgatc attatgacag tattaacaga
     2881 taaagtagca gtagttacag gtgcaggtag tggtattgga gaagcaattg caacattact
     2941 acatgaagaa ggggcaaaag ttgtcttagc aggtagaaat aaagaaaaat tacaaaacgt
     3001 agcgaatcaa ttgtcacaag atagtgtgaa ggtagtgcca acagatgtaa cgaataaaga
     3061 agaagtcgat gaattgataa aaattgcaca acaaacattc ggtggtttgg atattgttat
     3121 caatagtgcg gggcaaatgt tgtcgtctaa gattactgat tatcaagtag atgagtggga
     3181 tagtatgatt gatgtgaata tcaaaggcac tttatatacg gcacaggctg cattaccaac
     3241 tatgttagaa caatcaagtg gccatcttat taacattgca tctatttctg gctttgaagt
     3301 aacgaaaagt agtacgattt atagtgcgac gaaagcagca gttcacacta ttactcaagg
     3361 attagaaaaa gagttggcaa agacaggcgt taaagtaaca agcatttctc caggaatggt
     3421 agatacagcc ataactgccg catacaatcc aacagatcgt aaaaaacttg aaccacaaga
     3481 tattgcagaa gcagtattat atgcattaac acaaccaaag cacgttaacg tgaatgaaat
     3541 tacagtgcgt cctgtataaa aaggtgtttg aggtctgggg tataggcatt taatgtaata
     3601 gctatcgatt ttgttaatgt tagtaaggca ataattacat gagggcataa taggcaatta
     3661 ttccttgtac aattctcagt aattgctgat tttaacaatc aagttaatga aggcgacgat
     3721 gttagtgtta tggtttataa tctgtaatgt tcataattat agattataaa aattttttca
     3781 ttttccacca cattttagga gttactttaa tgaacaaaaa acatgttttt ataattattg
     3841 gtgtcatttt atgtatatgt atagttgcat cagtcat
//
LOCUS       DALPQQ010000164         3780 bp    DNA     linear   BCT 22-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus strain K18-6-464
            SAMD00233528-rid16434743.denovo.165, whole genome shotgun sequence.
ACCESSION   DALPQQ010000164 DALPQQ010000000
VERSION     DALPQQ010000164.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMD00233528
            Sequence Read Archive: DRR236061
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 3780)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3780)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001543423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001543423.1
            Genome Coverage       :: 77x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/22/2022 17:09:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,811
            CDSs (total)                      :: 2,743
            Genes (coding)                    :: 2,689
            CDSs (with protein)               :: 2,689
            Genes (RNA)                       :: 68
            rRNAs                             :: 2, 4, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 4, 2 (16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 54
            CDSs (without protein)            :: 54
            Pseudo Genes (ambiguous residues) :: 0 of 54
            Pseudo Genes (frameshifted)       :: 27 of 54
            Pseudo Genes (incomplete)         :: 27 of 54
            Pseudo Genes (internal stop)      :: 10 of 54
            Pseudo Genes (multiple problems)  :: 10 of 54
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3780
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMD00233528-rid16434743.denovo.165"
                     /strain="K18-6-464"
                     /db_xref="taxon:1280"
                     /geo_loc_name="Japan: Niigata"
     gene            complement(323..523)
                     /locus_tag="O7798_002432"
     CDS             complement(323..523)
                     /locus_tag="O7798_002432"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001059082.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cold-shock protein"
                     /protein_id="HDC2864628.1"
                     /translation="MNNGTVKWFNAEKGFGFIEREDGSDVFVHFSAIAEDGYKSLEEG
                     QKVEFDIVEGDRGEQAANVVKM"
     gene            complement(880..1566)
                     /locus_tag="O7798_002433"
     CDS             complement(880..1566)
                     /locus_tag="O7798_002433"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499373.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thermonuclease family protein"
                     /protein_id="HDC2864629.1"
                     /translation="MTEYLLSAGICMAIVSILLIGMAISNVSKGQYAKRFFYFATSCL
                     VLTLVVVSSLSSSANASQTDNGVNRSGSEDPTVYSATSTKKLHKEPATLIKAIDGDTV
                     KLMYKGQPMTFRLLLVDTPETKHPKKGVEKYGPEASAFTKKMVENAKKIEVEFDKGQR
                     TDKYGRGLAYIYADGKMVNEALVRQGLAKVAYVYKPNNTHEQLLRKSEAQAKKEKLNI
                     WSEDNADSGQ"
     gene            complement(1907..2377)
                     /locus_tag="O7798_002434"
     CDS             complement(1907..2377)
                     /locus_tag="O7798_002434"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499372.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDC2864630.1"
                     /translation="MKRKVLVLTMGVICATQLWHSNHANALVTESGANDTKQFTEIVS
                     EEKVITVEHAQINIFQSNSNSNLMEFNILTMGGKSGAMVGYSEIDSSHFTDRDKRVIR
                     RDHVKEAQSLVENYKDTQSADARMKAKQKVNTLSKPHQNYFNKQIDKVYNGLQR"
     gene            complement(2712..3734)
                     /gene="emp"
                     /locus_tag="O7798_002435"
     CDS             complement(2712..3734)
                     /gene="emp"
                     /locus_tag="O7798_002435"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499371.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="extracellular matrix protein-binding adhesin
                     Emp"
                     /protein_id="HDC2864631.1"
                     /translation="MKKKLLVLTMSTLFATQIMNSNHAKASVTESVDKKFVVPESGIN
                     KIIPAYDEFKNSPKVNVSNLTDNKNFVASEDKLNKIADSSAASKIVDKNFVVPESKLG
                     NIVPEYKEINNRVNVATNNPASQQVDKHFVAKGPEVNRFITQNKVNHHFITTQTHYKK
                     VITSYKSTHVHKHVNHAKDSINKHFIVKPSESPRYTHPSQSLIIKHHFAVPGYHAHKF
                     VTPGHASIKINHFCVVPQINSFKVIPPYGHNSHRMHVPSFQNNTTATHQNAKVNKAYD
                     YKYFYSYKVVKGVKKYFSFSQSNGYKIGKPSLNIKNVNYQYAVPSYSPTHYVPEFKGS
                     LPAPRV"
BASE COUNT         1161 a          614 c          527 g         1478 t
ORIGIN      
        1 cgatgtggta tcctattatt gttaaacatt ttgagtgttt aacattactt cttgttatcg
       61 ccatatacag actttaattc tcgtcattat taaagttctg tattggcgct tttttatatt
      121 caaaatcaaa agtcggacag atgaaaagta aaaaactttt ccatcagttc gatttatttt
      181 agaaccatta tatattgtta aatctccaac taaatttatt ggacaaaaaa aataacggct
      241 agtgctttta ccacaccaac tgttatcgat ttaaagcata aaaaaacagc cctatagtaa
      301 ggactgtttg aataagttaa aattacattt taactacgtt tgcagcttgc tcgccacggt
      361 cgccttcaac gatgtcgaat tcaacttttt ggccttcttc taatgatttg tatccatctt
      421 cagcgattgc tgagaagtgt acgaatacgt cgctaccatc ttctctttcg atgaaaccaa
      481 aacctttttc tgcattaaac catttaactg taccgttatt catattgaat acctccgtcg
      541 tgcttttgca ctaaatattt tgtaacaaat tcataaatga aaaggagaat attctatata
      601 aataactcac atttttcttc acgctcttta ttacttaact ttcattatac acttttaaat
      661 atagaagtaa agcattattt tattttctgt gataatacac attgaactat atagtaacat
      721 tccattttaa tactaaattt aaaattttta ttttctaata ttaaatacac ttacttttga
      781 tactatttac ttttttaatt ctgaattgat aataaatcat atcgtgatct aaaaattata
      841 aaagtgccac tagcagcagt gacactttta caatgagcat tattgacctg aatcagcgtt
      901 gtcttcgctc caaatattta atttctcttt ttttgcttgt gcttcacttt ttcttaaaag
      961 ttgttcatgt gtattgttag gtttataaac ataagcaact ttagccaagc cttgacgaac
     1021 taaagcttcg tttaccattt ttccatcagc ataaatatac gctaagccac gtccatattt
     1081 atcagttctt tgacctttgt caaactcgac ttcaattttc tttgcatttt ctaccatttt
     1141 tttcgtaaat gcacttgctt caggaccata tttctctaca ccttttttag gatgctttgt
     1201 ttcaggtgta tcaaccaata atagtctgaa tgtcattggt tgacctttgt acattaattt
     1261 aaccgtatca ccatcaatcg ctttaattaa tgtcgcaggt tctttatgta attttttagt
     1321 tgaagttgca ctatatactg ttggatcttc agaaccactt ctatttacgc cattatctgt
     1381 ttgtgatgca tttgctgagc tacttagact tgaaactaca actaaagtta acactaaaca
     1441 actagtagcg aaatagaaaa acctctttgc gtattgccct ttcgaaacat tactgatagc
     1501 catccctata agtaatattg aaacgattgc catacatatg ccagcactta ataagtattc
     1561 tgtcataact aacacctctt tctttttagt taattttaat attaaacgtt aattaattat
     1621 aattctacat ttttacaatt aattaataaa aatttaataa ttataataaa ataactatac
     1681 ttacttttat gtattttcta tattttaggt gccagaactt atatatttag ccttatttgt
     1741 aaaattaaaa agcctacaac atgaatcgtt gcagactatc atatcgagac aaagaggttt
     1801 attagtgtct ctatatctat gtggaatttg aaaagattat ttataatatt tacggggata
     1861 aattgtcatt taaaaacgag atgtataact tataatttac tttggattag cgttgtaatc
     1921 cattataaac cttatcaatt tgtttattga aatagttttg atgcggtttg cttaatgtgt
     1981 taactttttg tttggctttc atcctagcat cagcactttg tgtatcttta tagttctcta
     2041 ctaagctttg tgcttcttta acatgatcac gtctaataac gcgtttgtca cggtctgtga
     2101 aatgtgatga gtcaatttca ctataaccaa ccatagctcc tgatttaccg cccattgtta
     2161 atatgttgaa ctccatcaag tttgaattgc tattagattg aaaaatatta atttgagcat
     2221 gttcaactgt tataactttc tcttccgata caatttcagt aaattgctta gtatcatttg
     2281 cgccactctc tgttactaat gcgtttgcgt gattagaatg ccataattga gttgcacaaa
     2341 ttacacccat tgttagtact aatactttcc ttttcatttg tttatgctcc cttatttgct
     2401 ttgatataaa aaccgacttt ttcaccctgt tttcttcgcc attgaaaatt atataccaat
     2461 attttagaaa caataattaa cttgcgatga acaaactatt aacaataatc ttgagtatta
     2521 tatttatctt aattaataat atatttattt aagattatgt tacttccaac tttcaaagta
     2581 gaaaaacggt ataatttgtt gatgggtgtt tattgataaa ctgcaaaaaa tacagcctac
     2641 aaccacatag attgtagact atatttaaaa taataggtat ttatcatatc tcgtaaactt
     2701 agtgccattt tttatactcg tggtgctggt aagctaccct taaattcagg aacgtagtgt
     2761 gtagggctat aacttggaac agcatattga taatttacat ttttgatatt taatgatggt
     2821 ttcccaattt tataaccatt tgattgtgaa aatgagaaat atttcttcac acctttaact
     2881 actttataag aatagaagta tttatagtca tatgctttat ttactttagc attttgatgt
     2941 gttgctgttg tgttattttg gaaacttggt acatgcatac gatgtgaatt gtgaccatat
     3001 ggtggaatta ccttgaaact atttatttgt ggcacaacac aaaagtgatt aattttaatg
     3061 ctagcatgcc ctggtgtaac aaatttatgc gcgtgatatc caggaactgc aaaatgatgc
     3121 ttgataatta aagattgaga tggatgtgta tatctaggcg attctgatgg tttaacaata
     3181 aagtgtttat taatagaatc ctttgcatga tttacatgtt tatgtacatg tgttgatttg
     3241 tatgaagtaa taactttctt gtagtgggtt tgcgtagtaa tgaagtggtg gtttactttg
     3301 ttttgcgtaa taaatctatt tacttctggg cctttagcaa caaaatgctt atcaacttgt
     3361 tgtgaagctg gattgtttgt tgctacattc acgcgattat tgatttcttt gtactctggc
     3421 acaatgtttc ctaactttga ttctggtacg acaaagtttt tatctacaat tttactagct
     3481 gccgatgaat ctgcaatctt attcaattta tcttcagaag ctacaaagtt tttattgtca
     3541 gttaaattac taacatttac ttttggcgaa ttcttaaatt catcgtaagc tggaataatt
     3601 ttattaattc ctgattctgg aactacaaat tttttgtcaa cactctctgt cactgatgct
     3661 ttagcgtgat ttgaattcat aatttgtgta gcaaatagcg tgctcatagt taaaactaat
     3721 aatttctttt tcatctgtta tttctccttt atatagactc aatattataa ccaatataat
//
LOCUS       DALPQQ010000165         3752 bp    DNA     linear   BCT 22-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus strain K18-6-464
            SAMD00233528-rid16434743.denovo.166, whole genome shotgun sequence.
ACCESSION   DALPQQ010000165 DALPQQ010000000
VERSION     DALPQQ010000165.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMD00233528
            Sequence Read Archive: DRR236061
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 3752)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3752)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001543423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001543423.1
            Genome Coverage       :: 77x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/22/2022 17:09:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,811
            CDSs (total)                      :: 2,743
            Genes (coding)                    :: 2,689
            CDSs (with protein)               :: 2,689
            Genes (RNA)                       :: 68
            rRNAs                             :: 2, 4, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 4, 2 (16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 54
            CDSs (without protein)            :: 54
            Pseudo Genes (ambiguous residues) :: 0 of 54
            Pseudo Genes (frameshifted)       :: 27 of 54
            Pseudo Genes (incomplete)         :: 27 of 54
            Pseudo Genes (internal stop)      :: 10 of 54
            Pseudo Genes (multiple problems)  :: 10 of 54
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3752
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMD00233528-rid16434743.denovo.166"
                     /strain="K18-6-464"
                     /db_xref="taxon:1280"
                     /geo_loc_name="Japan: Niigata"
     gene            165..938
                     /locus_tag="O7798_002436"
     CDS             165..938
                     /locus_tag="O7798_002436"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000835976.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tandem-type lipoprotein"
                     /protein_id="HDC2864632.1"
                     /translation="MIHSKRLRLWLYLVLLAVFIGACGMKKEESSKDKQIKENFNKTL
                     SLYPTKNLEDFYDKEGFRDQEFEKGDKGTWIIHSKMTIETNGKNMESRGLVLYVDRNT
                     RTTKGEFIVRELWEDKKGYSRSKEKEYPVKMEHNKIIPTKPIADDKLRKEIENFKFFV
                     QYGDFKDINDYKDGDISYNPNVPSYSAKYQLSNDDYNVKQLRKRYDIPTKKAPKLLIK
                     GDGDLKGSSIGHKNLEFTFIENKEENIYFTDSINFKPTE"
     gene            1050..1834
                     /locus_tag="O7798_002437"
                     /pseudo
     CDS             1050..1834
                     /locus_tag="O7798_002437"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501248.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="tandem-type lipoprotein"
     gene            1831..3155
                     /locus_tag="O7798_002438"
                     /pseudo
     CDS             1831..3155
                     /locus_tag="O7798_002438"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001619610.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            3155..3481
                     /locus_tag="O7798_002439"
     CDS             3155..3481
                     /locus_tag="O7798_002439"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501245.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDC2864633.1"
                     /translation="MFTTYKNINELENAYDEERKQLNDAFNQIDELRHQTRKKCEQMY
                     DHFLYLKHKMNYSEDSMIRMTRIIESFDRETNQRIRHHEMKLEDYKDELRREYLKQSD
                     RIEGDE"
     gene            3484..>3752
                     /locus_tag="O7798_002440"
     CDS             3484..>3752
                     /locus_tag="O7798_002440"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501244.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDC2864634.1"
                     /translation="MGLDFSGLPDLAVLEQMKEKEQISEVIAPEHVRMHHDHQNKLKS
                     DEKILLDQMVSHFKKFEDDFKNAAQGAWVKNATDELKDISNDLEK"
BASE COUNT         1555 a          481 c          696 g         1020 t
ORIGIN      
        1 taaagatatt tgcgcttttt aaataatttg tgatgttgat atgtgaaaaa tacaactaac
       61 aattaaaatc cacgaggatt taatcataaa atttcctcta atattattaa tattggaatt
      121 tgaacttaac tttgcatcaa aaataaaaat ggggatgtga aatgatgatt cactcaaaaa
      181 ggttgaggct ctggctgtat ttagtattat tagctgtttt tataggggct tgcggaatga
      241 aaaaggaaga aagcagtaaa gataaacaaa ttaaagaaaa cttcaacaaa acgttgagcc
      301 tgtatccaac taaaaatctt gaagactttt atgataagga aggctttcga gatcaagagt
      361 ttgaaaaggg cgacaaaggc acttggataa ttcactctaa aatgacaata gaaacaaatg
      421 gaaagaatat ggaatccaga ggattggtcc tgtatgtaga ccgcaatacc agaacgacaa
      481 aaggtgaatt tattgtgagg gaattatggg aagataaaaa aggatactca cgtagtaaag
      541 aaaaagaata tccagtaaaa atggaacata ataaaattat cccaaccaaa ccgatagctg
      601 atgataaatt aagaaaagaa atcgaaaact ttaaattctt tgtacaatac ggtgacttta
      661 aagatattaa tgattataaa gatggtgaca tttcatataa tccgaatgtg ccaagttatt
      721 cagcaaagta tcaattaagt aatgatgact acaatgtgaa gcaacttaga aagaggtatg
      781 atataccaac taagaaagca cctaaattat taataaaagg cgatggtgat ttaaaaggat
      841 catctatagg acacaaaaat ttagagttta catttataga aaataaagaa gaaaacatct
      901 attttacgga tagtattaat ttcaaaccta ctgaataggg ttaatagaag tttgaaatga
      961 aaatttcata aagtgttcaa aataattttt cgctttagtt gtgtaaatta aagattgagt
     1021 cagtattaaa aatataaggt ggagaaatga tgattcattc aaagaaatta acgctcggta
     1081 tatgtttggt attactcatt atattgattg gaggttgtgt cattatgaca aaaacaaatg
     1141 gtcgaaacgc tcaaattaaa gaaaatttca acaaaacatt aagtgtatat ccaaccaaga
     1201 atctcgatga tttttacgat aaggaaggtt ttcgagatca agaatttgat aaaagagata
     1261 aagggacttg gattatttat tctgaaatgg ttatcgaacc aaaagggaaa aatatggaat
     1321 cgagaggaat ggtgctctat atcaatcgca atactagaac aacgaagggt aattttattg
     1381 tcaccgaaat aactgaagat agtaaaggat attcacgtag taaagaaaaa aatatcctgt
     1441 caagatggaa aataatcgaa ttattccaac aaagcctata ccggatgaca agttaaaaaa
     1501 agagattgaa aactttaagt tctttgtaca atatggaaat tttaaagatt ttaaagatta
     1561 taaaaatggt gatatttcat ataatcctaa tgtgccaagt tattctgcaa agtatcaatt
     1621 gaataatgat gactataatg ttcaacagtt aagaaaacga tatcatattc caaccaaaca
     1681 agcgcccgaa ttaaaattga aaggatccgg caatttaaaa ggctcatccg taggatctaa
     1741 ggatctagaa tttacgtttg tagaaaatca agaagagaat atctattttt cagattcggt
     1801 cgaatttaca cctagcgagg atgataaatc atgagtcaaa cggaatatca aataaaatct
     1861 ggcaatataa aaggtaactc tgaagaaaca agtacagtat ctaatataag ttatgaaata
     1921 gaaaacgcaa ataacagtgg tttaaaacaa aataaaattg ataaacaaat taaaaagtta
     1981 caagaaaaaa ataaattccc taaaaatctt tcatatctta aaagttatac ggaccccaaa
     2041 acaggcacga ctacaagcgc ctttttaaat aaagacactg gcaaagttac tttaggtatg
     2101 acaggtacta atgtacacaa agacgcaata ttaaaacaaa catttggtgt tccttcttat
     2161 caaggatata tagatgtgag tgaaacgcta aaggatattg gggccgatgt caatattggc
     2221 cttcattccg tcacagataa agatccacat tataaaaata cccaagactt tatcaaaaat
     2281 atcaaaaaag actatgatat tgatattatt accggacatt cgctgggcgg tagagatgcg
     2341 atgattttag gtatgagtaa tgatattaaa catatcgttg tgtataatcc agctccatta
     2401 gcgatcaaag atgtgagcgg cctttatgcc gatcaagaag aacttaaaaa attgattgaa
     2461 aagtacgatg gtcacattgt aagatttgtg tctgatgaag acgaattaga tgcaggtgtc
     2521 cgcaatcatt tatatgaaac tgctggagaa aaaatagtac ttaaaaatgg agaaggccat
     2581 gcaatgagtg gtattttaat gagcagaaca caggctataa tcttagctga attaaacaaa
     2641 gttaaaggct accaagacga aaataataaa gcattaaaat ccgttcgtaa acaaacgagg
     2701 catagattac ataaagtaga gacgttaaga gcgaattgga ttcaaacaac gggtggatca
     2761 ctctcttcct cccaacaaca attattagaa gctttaacag cactaaccat tgccgaaggc
     2821 ttaaatcaat tagtgaatga agaaagccaa catttgaaaa aatgtatcac gcgatggcac
     2881 ataaatttgg agacaactgg aaaaaagcgc aagaagttgg aaatgaaatt ggtgaaaaat
     2941 taacctctga agaggttata gatgaattaa gaaaaggtgg cgcgtatgaa agtaaacttg
     3001 aaacagatcc caaaagaaaa attgatgata agataaagaa attaaatgat gtttataaaa
     3061 attgtaatgg ctatatcgca aaaattaaac agagtatcga agcaattgtt tctaatgacc
     3121 aaatgttagc gagccagatt gatgggatga tgtaatgttt actacgtata aaaatattaa
     3181 tgaacttgaa aatgcctatg atgaagaaag aaaacaattg aatgatgcat tcaatcaaat
     3241 tgatgaatta agacatcaaa cacgcaagaa atgtgaacaa atgtatgatc atttcttata
     3301 tctcaaacat aaaatgaatt atagtgaaga ctctatgatc aggatgacac gtattataga
     3361 atctttcgat agagaaacga atcaacgtat ccgacatcac gaaatgaaat tagaagatta
     3421 taaagatgag ttaagaagag aatatctaaa acaatctgac agaattgaag gagatgaata
     3481 agcgtgggac ttgattttag tggtttacca gatttagcag tattggaaca aatgaaggaa
     3541 aaagaacaga ttagtgaggt tattgcgcct gaacatgttc gtatgcatca tgatcatcaa
     3601 aataagctga aaagtgatga gaaaatatta cttgaccaaa tggtaagtca tttcaaaaaa
     3661 tttgaagatg attttaaaaa tgcggcacaa ggggcttggg tgaaaaatgc cacagacgaa
     3721 ttaaaagata ttagtaatga tttagaaaaa at
//
LOCUS       DALPQQ010000166         3727 bp    DNA     linear   BCT 22-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus strain K18-6-464
            SAMD00233528-rid16434743.denovo.167, whole genome shotgun sequence.
ACCESSION   DALPQQ010000166 DALPQQ010000000
VERSION     DALPQQ010000166.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMD00233528
            Sequence Read Archive: DRR236061
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 3727)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3727)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001543423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001543423.1
            Genome Coverage       :: 77x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/22/2022 17:09:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,811
            CDSs (total)                      :: 2,743
            Genes (coding)                    :: 2,689
            CDSs (with protein)               :: 2,689
            Genes (RNA)                       :: 68
            rRNAs                             :: 2, 4, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 4, 2 (16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 54
            CDSs (without protein)            :: 54
            Pseudo Genes (ambiguous residues) :: 0 of 54
            Pseudo Genes (frameshifted)       :: 27 of 54
            Pseudo Genes (incomplete)         :: 27 of 54
            Pseudo Genes (internal stop)      :: 10 of 54
            Pseudo Genes (multiple problems)  :: 10 of 54
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3727
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMD00233528-rid16434743.denovo.167"
                     /strain="K18-6-464"
                     /db_xref="taxon:1280"
                     /geo_loc_name="Japan: Niigata"
     gene            35..2818
                     /gene="clfA"
                     /locus_tag="O7798_002441"
     CDS             35..2818
                     /gene="clfA"
                     /locus_tag="O7798_002441"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499368.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MSCRAMM family adhesin clumping factor ClfA"
                     /protein_id="HDC2864635.1"
                     /translation="MNMKKKEKHAIRKKSIGVASVLVGTLIGFGLLSSKEADASENSV
                     TQSDSASNESKSNDSSSVSAAPKTDDTNVSDTKTSSNTNNGETSVAQNPAQQETTQSS
                     STNATTEETPVTGEATTTTTNQANTPATTQSSNTNAEELVNQTSNETTSNDTNTVSSV
                     NSPQNSTNAENVSTTQDTSTEATPSNNESAPQSTDASNKDVVNQAVNTSAPRMRAFSL
                     AAVAADAPAAGTDITNQLTNVTVGIDSGTTVYPHQAGYVKLNYGFSVPNSAVKGDTFK
                     ITVPKELNLNGVTSTAKVPPIMAGDQVLANGVIDSDGNVIYTFTDYVNTKDDVKATLT
                     MPAYIDPENVKKTGNVTLATGIGSTTANKTVLVDYEKYGKFYNLSIKGTIDQIDKTNN
                     TYRQTIYVNPSGDNVIAPVLTGNLKPNTDSNALIDQQNTSIKVYKVDNAADLSESYFV
                     NPENFEDVTNSVNITFPNPNQYKVEFNTPDDQITTPYIVVVNGHIDPNSKGDLALRST
                     LYGYNSNIIWRSMSWDNEVAFNNGSGSGDGIDKPVVPEQPDEPGEIEPIPEDSDSDPG
                     SDSGSDSNSDSGSDSGSDSTSDSGSDSASDSDSASDSDSASDSDSASDSDSASDSDSD
                     NDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSD
                     SDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSD
                     SDSDSDSDSDSDSDSDSDSDSDSDSDSASDSDSDSDSDSDSDSDSDSDSDSDSDSDSD
                     SDSDSDSDSESDSDSDSDSDSDSDSDSDSDSDSASDSDSGSDSDSSSDSDSESDSNSD
                     SESGSNNNVVPPNSPKNGTNASNKNEAKDSKEPLPDTGSEDEANTSLIWGLLASIGSL
                     LLFRRKKENKDKK"
     gene            3039..>3727
                     /locus_tag="O7798_002442"
     CDS             3039..>3727
                     /locus_tag="O7798_002442"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000791729.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="coagulase"
                     /protein_id="HDC2864636.1"
                     /translation="MKNKLLVLSLGALCVSQIWESNRASAVVSGEKNPYVSESLKLTN
                     NKNKSRTVEEYKKSLDDLIWSFPNLDNERFDNPEYKEAMKKYQQRFMAEDEALKKFFS
                     EEKKIKNGNTDNLDYLGLSHERYESVFNTLKKQSEEFLKEIEDIKKDNPELKDFNEEE
                     QLKCDLELNKLENQILMLGKTFYQNYRDDVESLYSKLDLIMGYKDEERANKKAVNKRM
                     LENKKEDLETI"
BASE COUNT         1388 a          595 c          755 g          989 t
ORIGIN      
        1 aatataaaat gactttttaa aaagagggaa taaaatgaat atgaagaaaa aagaaaaaca
       61 cgcaattcgg aaaaaatcga ttggcgtggc ttcagtgctt gtaggtacgt taatcggttt
      121 tggactactc agcagtaaag aagcagatgc aagtgaaaat agtgttacgc aatctgatag
      181 cgcaagtaac gaaagcaaaa gtaatgattc aagtagcgtt agtgctgcac ctaaaacaga
      241 cgacacaaac gtgagtgata ctaaaacatc gtcaaacact aataatggcg aaacgagtgt
      301 ggcgcaaaat ccagcacaac aggaaacgac acaatcatca tcaacaaatg caactacgga
      361 agaaacgccg gtaactggtg aagctactac tacgacaacg aatcaagcta atacaccggc
      421 aacaactcaa tcaagcaata caaatgcgga ggaattagtg aatcaaacaa gtaatgaaac
      481 gacttctaat gatactaata cagtatcatc tgtaaattca cctcaaaatt ctacaaatgc
      541 ggaaaatgtt tcaacaacgc aagatacttc aactgaagca acaccttcaa acaatgaatc
      601 agctccacag agtacagatg caagtaataa agatgtagtt aatcaagcgg ttaatacaag
      661 tgcgcctaga atgagagcat ttagtttagc ggcagtagct gcagatgcac cggcagctgg
      721 cacagatatt acgaatcagt tgacgaatgt gacagttggt attgactctg gtacgactgt
      781 gtatccgcac caagcaggtt atgtcaaact gaattatggt ttttcagtgc ctaattctgc
      841 tgttaaaggt gacacattca aaataactgt acctaaagaa ttaaacttaa atggtgtaac
      901 ttcaactgct aaagtgccac caattatggc tggagatcaa gtattggcaa atggtgtaat
      961 cgatagtgat ggtaatgtta tttatacatt tacagactat gtaaatacta aagatgatgt
     1021 aaaagcaact ttgaccatgc ccgcttatat tgaccctgaa aatgttaaaa agacaggtaa
     1081 tgtgacattg gctactggca taggtagtac aacagcaaac aaaacagtat tagtagatta
     1141 tgaaaaatat ggtaagtttt ataacttatc tattaaaggt acaattgacc aaatcgataa
     1201 aacaaataat acgtatcgtc agacaattta tgtcaatcca agtggagata acgttattgc
     1261 gccggtttta acaggtaatt taaaaccaaa tacggatagt aatgcattaa tagatcagca
     1321 aaatacaagt attaaagtat ataaagtaga taatgcagct gatttatctg aaagttactt
     1381 tgtgaatcca gaaaactttg aggatgtcac taatagtgtg aatattacat tcccaaatcc
     1441 aaatcaatat aaagtagagt ttaatacgcc tgatgatcaa attacaacac cgtatatagt
     1501 agttgttaat ggtcatattg atccgaatag caaaggtgat ttagctttac gttcaacttt
     1561 atatgggtat aactcgaata taatttggcg ctctatgtca tgggacaacg aagtagcatt
     1621 taataacgga tcaggttctg gtgacggtat cgataaacca gttgttcctg aacaacctga
     1681 tgagcctggt gaaattgaac caattccaga ggattcagat tctgacccag gttcagattc
     1741 tggcagcgat tctaattcag atagcggttc agattcgggt agtgattcta catcagatag
     1801 tggttcagat tcagcgagtg attcagattc agcaagtgat tcagactcag cgagtgattc
     1861 agattcagca agcgattccg actcagcgag cgattccgac tcagacaatg actcggattc
     1921 agatagcgat tctgactcag acagtgactc agattccgac agtgactcag attcagatag
     1981 cgattctgac tcagacagtg actcagattc agatagcgat tcagattcag atagcgattc
     2041 agattccgac agtgattccg actcagacag cgattctgac tccgacagtg attccgactc
     2101 agacagcgat tcagattccg acagtgattc cgactcagat agcgattccg actcagatag
     2161 cgactcagat tcagacagcg attcagattc agacagcgat tcagattcag atagcgattc
     2221 agattccgac agtgactcag attccgacag tgactcggat tcagatagcg attcagattc
     2281 cgacagtgac tcagattccg acagtgactc agactcagac agtgattcgg attcagcgag
     2341 tgattcggat tcagatagtg attccgactc cgacagtgac tcggattcag atagcgactc
     2401 agactcggat agcgactcgg attcagatag cgattcggac tcagatagcg attcagaatc
     2461 agacagcgat tcagattcag acagcgactc agacagtgac tcagattcag atagtgactc
     2521 ggattcagcg agtgattcag actcaggtag tgactccgat tcatcaagtg attccgactc
     2581 agaaagtgat tcaaatagcg attccgagtc aggttctaac aataatgtag ttccgcctaa
     2641 ttcacctaaa aatggtacta atgcttctaa taaaaatgag gctaaagata gtaaagaacc
     2701 attaccagat acaggttctg aagatgaagc aaatacgtca ctaatttggg gattattagc
     2761 atcaataggt tcattactac ttttcagaag aaaaaaagaa aataaagata agaaataagt
     2821 aataatgata ttaaattaat catatgattc atgaagaagc caccttaaaa ggtggctttt
     2881 ttacttggat tttccaaata tattgtttga atataattaa taattaattc atcaacagtt
     2941 aattatttta aaaaggtaga tgttatataa tttggcttgg cgaaaaaata gggtgtaagg
     3001 taggttgtta attagggaaa attaaggaga aaatacagtt gaaaaataaa ttgctagttt
     3061 tatcattggg agcattatgt gtatcacaaa tttgggaaag taatcgtgcg agtgcagtgg
     3121 tttctgggga gaagaatcca tatgtatctg agtcgttgaa actgactaat aataaaaata
     3181 aatctagaac agtagaagag tataagaaaa gcttggatga tttaatatgg tcctttccaa
     3241 acttagataa tgaaagattt gataatcctg aatataaaga agctatgaaa aaatatcaac
     3301 agagatttat ggctgaagat gaggctttga agaaattttt tagtgaagag aaaaaaataa
     3361 aaaatggaaa tactgataat ttagattatc taggattatc tcatgaaaga tatgaaagtg
     3421 tatttaatac tttgaaaaaa caaagtgagg agttcttaaa agaaattgaa gatataaaaa
     3481 aagataaccc tgaattgaaa gactttaatg aagaggagca attaaagtgc gacttagaat
     3541 taaacaaatt agaaaatcag atattaatgt taggtaaaac attttatcaa aactatagag
     3601 atgatgttga aagtttatat agtaagttag atttaattat gggatataaa gatgaagaaa
     3661 gagcaaataa aaaagcagtt aacaaaagga tgttagaaaa taaaaaagaa gacttagaaa
     3721 ccataat
//
LOCUS       DALPQQ010000167         3725 bp    DNA     linear   BCT 22-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus strain K18-6-464
            SAMD00233528-rid16434743.denovo.168, whole genome shotgun sequence.
ACCESSION   DALPQQ010000167 DALPQQ010000000
VERSION     DALPQQ010000167.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMD00233528
            Sequence Read Archive: DRR236061
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 3725)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3725)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001543423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001543423.1
            Genome Coverage       :: 77x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/22/2022 17:09:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,811
            CDSs (total)                      :: 2,743
            Genes (coding)                    :: 2,689
            CDSs (with protein)               :: 2,689
            Genes (RNA)                       :: 68
            rRNAs                             :: 2, 4, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 4, 2 (16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 54
            CDSs (without protein)            :: 54
            Pseudo Genes (ambiguous residues) :: 0 of 54
            Pseudo Genes (frameshifted)       :: 27 of 54
            Pseudo Genes (incomplete)         :: 27 of 54
            Pseudo Genes (internal stop)      :: 10 of 54
            Pseudo Genes (multiple problems)  :: 10 of 54
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3725
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMD00233528-rid16434743.denovo.168"
                     /strain="K18-6-464"
                     /db_xref="taxon:1280"
                     /geo_loc_name="Japan: Niigata"
     gene            69..1016
                     /locus_tag="O7798_002443"
     CDS             69..1016
                     /locus_tag="O7798_002443"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500184.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PhoH family protein"
                     /protein_id="HDC2864637.1"
                     /translation="MPGIIQIDDMNQSQALIGNNDEHLKAIEESFDVVIHARGQEVAV
                     KGTKIENVEKAESVLINLLKVIDLGNNITIKDVEAAIKMAHNNTIQHLLDLYDEEITK
                     DAFGKTIRAKTMGQRIYVNAMKNNDLVFGIGPAGTGKTFLAVVYAAKQLRKGAVKRIV
                     LTRPAVEAGESLGFLPGDLKEKVDPYLRPLYDGLYTVLGREQTERFIERGIIEIAPLA
                     YMRGRTLEDAFVILDEAQNTTHAQMKMFLTRLGFGSKMVVTGDQTQIDLPKGVKSGLK
                     EAVSRLHNVKGISILKLDQSDVVRHPLVSKIIEHYEGEN"
     gene            1017..1484
                     /gene="ybeY"
                     /locus_tag="O7798_002444"
     CDS             1017..1484
                     /gene="ybeY"
                     /locus_tag="O7798_002444"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500183.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rRNA maturation RNase YbeY"
                     /protein_id="HDC2864638.1"
                     /translation="MFTIDFSDHTGLVKDAWYKQIEDLLEFAKKEEHIEDDAELSVTF
                     VDKQEIQEINRTYRDKDKVTDVISFALEEDEPEIDFSGLDIPRVLGDIIICTDVAQEQ
                     ANNYGHSFERELGFLALHGFLHLLGYDHMTEADEKEMFGRQDTILNAYGLTRD"
     gene            1487..1831
                     /locus_tag="O7798_002445"
     CDS             1487..1831
                     /locus_tag="O7798_002445"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500182.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="diacylglycerol kinase"
                     /protein_id="HDC2864639.1"
                     /translation="MKRFKYALDGLKILIQKDYKFLLHVFAMIVAIVFGLVLNINRIE
                     WIFILIAIALVLTVEALNTAIEYVVDLVTVEYHDLAKYAKDIAAFSVLIVSILAFIIG
                     LIVFLPHFIALF"
     gene            1842..2246
                     /gene="cdd"
                     /locus_tag="O7798_002446"
     CDS             1842..2246
                     /gene="cdd"
                     /locus_tag="O7798_002446"
                     /EC_number="3.5.4.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500181.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytidine deaminase"
                     /protein_id="HDC2864640.1"
                     /translation="MSYQPHYFQEVRKAQQESYSPYSQFKVGAYLKTKDGRTFYGTNV
                     ENASYPLSICAERASLVSAISQGYRPGDFESITVTVDADKPSSPCGACRQVLKELCDD
                     DMPVYMTNHKGDMVMMTVAELLPFGFSGKDLE"
     gene            2247..3146
                     /gene="era"
                     /locus_tag="O7798_002447"
     CDS             2247..3146
                     /gene="era"
                     /locus_tag="O7798_002447"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000134760.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GTPase Era"
                     /protein_id="HDC2864641.1"
                     /translation="MTEHKSGFVSIIGRPNVGKSTFVNRVIGHKIAIMSDKAQTTRNK
                     IQGVMTRDDAQIIFIDTPGIHKPKHKLGDYMMKVAKNTLSEIDAIMFMVNANEEIGRG
                     DEYIIEMLKNVKTPVFLVLNKIDLVHPDELMPKIEECQSYMDFTEIVPISALEGLNVD
                     HFIDVLKTYLPEGPKYYPDDQISDHPEQFVVGEIIREKILHLTSEEIPHAIGVNVDRM
                     VKESEDRVHIEATIYVERDSQKGIVIGKGGKKLKEVGKRARRDIEMLLGSKVYLELWV
                     KVQRDWRNKVNFIRQIGYVEDQD"
     gene            3174..>3725
                     /gene="recO"
                     /locus_tag="O7798_002448"
     CDS             3174..>3725
                     /gene="recO"
                     /locus_tag="O7798_002448"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500178.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA repair protein RecO"
                     /protein_id="HDC2864642.1"
                     /translation="MRQKGIIIKAVDYGESDKIITILNEHGAKVPLMARRAKKVKTGL
                     QAQTQLFVYGLFIYNQWRGMGTLNSVDVISQHYKLQMDLYVSSYAALAAETIERSMDE
                     GDIAPYNYQLLQFVLEKIESGTSAQLMSVVVMLKCMKRFGFTASFNRCAVSGNDTQAD
                     LIGYSFKFDGAISRQEASKDVHAV"
BASE COUNT         1329 a          489 c          771 g         1136 t
ORIGIN      
        1 gatataatta agtagatatt aaagcatcat agaatgaata taaatgatat atgaaaagga
       61 gcgcgtgtat gcctggaatt atacaaatag acgatatgaa ccaatctcaa gctttaattg
      121 gaaataatga tgaacattta aaagcaattg aagagagttt cgatgttgtc atccatgcaa
      181 gaggacaaga agttgccgtt aaaggtacaa aaatagaaaa cgtagaaaaa gcggaatcag
      241 tattaatcaa tttgctgaag gttattgatt taggtaataa tattacaatt aaagatgttg
      301 aagcagctat taaaatggcg cataataaca caattcaaca tctgttagat ttatatgatg
      361 aagagataac taaagatgca tttggtaaga cgattcgtgc gaaaacgatg gggcaacgta
      421 tatatgttaa tgccatgaaa aataatgatt tagtatttgg tataggtcct gctggtacag
      481 gtaagacatt cttagctgta gtttatgcag caaagcaact ccgtaaaggt gctgttaaac
      541 gtattgtatt aacaagacct gctgttgaag caggagagtc acttggattt ttaccaggag
      601 atttgaaaga aaaggtagat ccatatttaa gacctttata tgatggtcta tatactgttc
      661 ttgggcgtga acaaacagag cgatttattg aaagaggcat tatcgaaata gcgccacttg
      721 catatatgcg cggacgaaca ttagaagatg catttgtaat tcttgatgag gcgcagaata
      781 cgacacatgc gcaaatgaaa atgtttttaa caagactagg ttttggctca aaaatggtag
      841 ttactggtga ccaaactcaa atcgatttac ctaaaggtgt taaaagtgga cttaaggaag
      901 cggtcagtag gttacacaac gttaaaggta taagtatatt gaaattagat cagagcgatg
      961 tagtcagaca tccattggta agtaagatca ttgaacatta tgaaggagag aattaaatgt
     1021 ttacgataga ttttagcgat cacacaggct tagttaaaga tgcttggtat aaacaaattg
     1081 aagatttatt agaatttgct aaaaaagaag agcatataga agacgatgct gagctttctg
     1141 ttacatttgt agataaacaa gaaatacaag aaattaatcg aacatataga gataaagata
     1201 aagttacaga tgtaatctca tttgctttag aagaagatga gccagagatt gattttagtg
     1261 gtcttgatat accacgtgtt ttaggggata taattatctg tacggatgta gcgcaagaac
     1321 aagcaaacaa ttacggacat tcttttgaac gagaattagg atttttagca ttacatggat
     1381 ttttgcatct attaggttat gatcatatga ctgaagcgga tgaaaaggaa atgtttggtc
     1441 gacaagatac aatattaaac gcatatggat taacacgaga ctaattatga aaaggtttaa
     1501 atatgcactt gatgggctga aaatcttaat tcaaaaagac tataaatttc ttttacatgt
     1561 gtttgcaatg attgttgcta ttgtctttgg tctcgtacta aatattaatc ggattgagtg
     1621 gatatttata ctcattgcta ttgcattagt tctcactgtt gaagctttaa acactgctat
     1681 tgaatatgtt gtcgatttag tgaccgttga atatcatgat ttagctaaat acgctaaaga
     1741 tattgcggct tttagtgtac ttatagtttc aatattagca tttattatag gtttaatagt
     1801 atttttacca cattttatag cgttatttta gggaggcata tatgagttat caacctcatt
     1861 attttcaaga agttagaaaa gcacaacaag aatcatattc gccatacagt caatttaaag
     1921 taggggctta tttaaaaacg aaagacggta gaacttttta tggtaccaat gtagaaaatg
     1981 cttcttatcc attatcgata tgtgctgaac gagctagttt ggtatcggca atttctcaag
     2041 gatacagacc aggtgatttt gaatcaataa ctgtaaccgt agatgcagat aaaccgtcat
     2101 caccttgtgg tgcatgtcgt caagttttga aggaattatg tgatgatgat atgcctgtgt
     2161 atatgacaaa tcataaagga gatatggtta tgatgacagt cgcagagtta ctaccatttg
     2221 gattttcagg aaaggattta gaataaatga cagaacataa atcaggattt gtttcaatta
     2281 taggtagacc aaatgtagga aagtcaacat ttgttaatag agtgatcggc cataaaatag
     2341 caatcatgtc cgataaagct caaacaacta gaaataaaat tcaaggtgtt atgacaagag
     2401 atgacgcgca aattatattc attgatacgc caggtattca taaacctaaa cacaaattag
     2461 gtgactatat gatgaaagtc gctaaaaata cattatctga gatagatgca atcatgttta
     2521 tggttaatgc caatgaggaa attggacgag gcgatgaata tattatagaa atgttgaaaa
     2581 atgttaagac accagtattt ttagtattaa ataaaataga tttagtgcat ccagatgaat
     2641 taatgccaaa gattgaagaa tgtcaaagtt atatggactt tacagagatt gtacctattt
     2701 cagcattaga agggctaaat gtcgatcatt ttattgatgt tttaaagacg tatttacccg
     2761 aaggacctaa atattatcca gatgatcaaa tttcagacca tcctgaacaa tttgtagtgg
     2821 gtgaaatcat tcgtgaaaaa atccttcatc ttacaagtga agaaatccct catgcgattg
     2881 gtgttaatgt ggaccgtatg gttaaagaaa gcgaagatcg tgttcatatc gaagcaacta
     2941 tatatgttga aagagattcg caaaaaggaa ttgtcattgg aaaaggcggt aaaaagttaa
     3001 aagaagtagg aaaacgtgcg agacgtgata tagaaatgct tctaggctct aaagtttact
     3061 tagaattatg ggtcaaagtt caaagagact ggcgaaacaa agttaacttt attcgccaaa
     3121 ttggttatgt tgaagaccaa gattaatctt aaaagtggtg aagataattg ttaatgcgcc
     3181 aaaaagggat tatcatcaaa gcagttgatt atggtgaatc tgataaaatt atcacgattt
     3241 taaatgagca tggtgcaaaa gtaccactta tggcaaggcg tgctaaaaaa gttaagacgg
     3301 gtttacaagc gcaaacgcaa ttgtttgttt atggtttgtt tatttacaat cagtggcgag
     3361 gtatgggaac gttaaattct gtagatgtta ttagtcaaca ttataaatta caaatggacc
     3421 tttacgtaag cagttatgcc gctctggcag ctgaaactat tgagcgctca atggatgaag
     3481 gtgacattgc accatataac tatcaattat tacaatttgt tcttgaaaaa atagaatcag
     3541 gtacatctgc acagttaatg tcagtcgtag ttatgttaaa gtgcatgaaa cgatttggtt
     3601 ttactgcatc atttaatcgc tgtgctgtga gtggtaatga cacacaagca gatttaatag
     3661 gttatagttt taagtttgac ggtgcgattt caaggcaaga ggcttctaaa gatgtacatg
     3721 cagtt
//
LOCUS       DALPQQ010000168         3725 bp    DNA     linear   BCT 22-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus strain K18-6-464
            SAMD00233528-rid16434743.denovo.169, whole genome shotgun sequence.
ACCESSION   DALPQQ010000168 DALPQQ010000000
VERSION     DALPQQ010000168.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMD00233528
            Sequence Read Archive: DRR236061
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 3725)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3725)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001543423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001543423.1
            Genome Coverage       :: 77x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/22/2022 17:09:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,811
            CDSs (total)                      :: 2,743
            Genes (coding)                    :: 2,689
            CDSs (with protein)               :: 2,689
            Genes (RNA)                       :: 68
            rRNAs                             :: 2, 4, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 4, 2 (16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 54
            CDSs (without protein)            :: 54
            Pseudo Genes (ambiguous residues) :: 0 of 54
            Pseudo Genes (frameshifted)       :: 27 of 54
            Pseudo Genes (incomplete)         :: 27 of 54
            Pseudo Genes (internal stop)      :: 10 of 54
            Pseudo Genes (multiple problems)  :: 10 of 54
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3725
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMD00233528-rid16434743.denovo.169"
                     /strain="K18-6-464"
                     /db_xref="taxon:1280"
                     /geo_loc_name="Japan: Niigata"
     gene            286..675
                     /locus_tag="O7798_002449"
     CDS             286..675
                     /locus_tag="O7798_002449"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499460.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YisL family protein"
                     /protein_id="HDC2864643.1"
                     /translation="MLHLHILSWVLAIILFIATYLNISKNQGRSPFFKPLHMILRLFM
                     LLTLISGFWILIQSFMNGGANHMLLTLKMLCGVAVVGLMEVSIAKRKRHEQSHTMFWI
                     TIALIIITMVLGVILPLGPISKLFGIG"
     gene            complement(846..2162)
                     /locus_tag="O7798_002450"
     CDS             complement(846..2162)
                     /locus_tag="O7798_002450"
                     /EC_number="1.8.1.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499461.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CoA-disulfide reductase"
                     /protein_id="HDC2864644.1"
                     /translation="MPKIVVVGAVAGGATCASQIRRLDKESDIIIFEKDRDMSFANCA
                     LPYVIGEVVEDRRYALAYTPEKFYDRKQITVKTYHEVIAINDERQTVSVLNRKTNEQF
                     EESYDKLILSPGASANSLGFESDITFTLRNLEDTDAIDQFIKANQVDKVLVVGAGYVS
                     LEVLENLYERGLHPTLIHRSDKINKLMDADMNQPILDELDKREIPYRLNEEINAINGN
                     EITFKSGKVEHYDMIIEGVGTHPNSKFIESSNIKLDRKGFIPVNDKFETNVPNIYAIG
                     DIATSHYRHVDLPASVPLAWGAHRAASIVAEQIAGNDTIEFKGFLGNNIVKFFDYTFA
                     SVGVKPNELKQFDYKMVEVTQGAHANYYPGNSPLHLRVYYDTSNRQILRAAAVGKEGA
                     DKRIDVLSMAMMNQLTVDELTEFEVAYAPPYSHPKDLINMIGYKAK"
     gene            complement(2214..3038)
                     /locus_tag="O7798_002451"
     CDS             complement(2214..3038)
                     /locus_tag="O7798_002451"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499462.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Cof-type HAD-IIB family hydrolase"
                     /protein_id="HDC2864645.1"
                     /translation="MQPHLICLDLDGTLLNDNKEISSYTKQVLNELQQRGHQIMIATG
                     RPYRASQMYYHELNLTTPIVNFNGAYVHHPKDKNFKTCHEILDLGIAQNIIQGLQQYQ
                     VSNIIAEVKDYVFINNHDPRLFEGFSMGNPRIQTGNLLVHLKESPTSILIEAEESKIP
                     EIKNMLTHFYADHIEHRRWGAPFPVIEIVKLGINKARGIEQVRQFLNIDRNNIIAFGD
                     EDNDIEMIEYARHGVAMENGLQELKDVANNITFNNNEDGIGRYLNDFFNLNIRYYC"
     gene            3152..3460
                     /locus_tag="O7798_002452"
     CDS             3152..3460
                     /locus_tag="O7798_002452"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002465312.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metal-sulfur cluster assembly factor"
                     /protein_id="HDC2864646.1"
                     /translation="MEEALKDSILGALEMVIDPELGIDIVNLGLVYKVNVDDEGVCTV
                     DMTLTSMGCPMGPQIIDQVKTVLAEIPEIQDTEVNIVWSPPWTKDMMSRYAKIALGVS
                     "
BASE COUNT         1179 a          587 c          625 g         1334 t
ORIGIN      
        1 ttttttcttg cttttctaaa aaggtgttaa agataaatta tttataatgt taccattttg
       61 agatgaaagt gaaatattga tattaagaag tagttgatta ttttacagca gattcacaat
      121 attctaataa ggaataaaat gtcatgttct tcctctcaaa tatagaagtg tggtagaata
      181 tatattcgtg tataatcaaa tcatgattaa attacaagca agtgggtatt aatcccaaga
      241 agctttaatt taataatata aataattaaa gtggggggaa tcagtatgtt acatttacat
      301 atattaagtt gggtattagc gattatttta tttatcgcta catacttaaa catttcaaaa
      361 aatcaaggca gatcaccatt tttcaaaccg ttgcacatga ttttacgctt atttatgctg
      421 ttgacgttaa tttcaggatt ttggatatta attcagtcat ttatgaatgg cggggcaaat
      481 catatgttgc ttacattgaa aatgctgtgt ggtgttgcag tagttggatt gatggaagtg
      541 tcgattgcta aaagaaagag acatgaacaa agtcacacaa tgttttggat aacaattgca
      601 ttaattatca tcacaatggt attaggtgtc attctaccgt tagggcctat atcaaaatta
      661 ttcggtattg gctaattgat aagacatata gtatatgaca taaggcatgg acaattatta
      721 gtccaagacc ttatgtcttt tttgattcta aaaatgttaa acatcaaaaa tggactggat
      781 agtagtacca gtccaacata attctaacct agacaattaa gattagattg aatcgcatga
      841 ttcatttatt tagctttgta accaatcata ttgattaaat ctttagggtg gctatatggt
      901 ggtgcataag ccacttcaaa ctcagttaac tcatctacag ttagctggtt catcattgcc
      961 atcgatagta catcaatacg tttatctgca ccttcttttc ctactgcagc tgctcttaaa
     1021 atctgacggt ttgaagtgtc ataatatact cttaagtgta aaggggaatt tcctgggtaa
     1081 taattcgcgt gtgcaccttg agtgacttct accattttat agtcaaattg ctttagttcg
     1141 tttggtttaa cgccgacact cgcaaatgta taatcaaaga acttcacaat attgttgcct
     1201 aagaagcctt tgaattcaat agtgtcattt ccagcaattt gttcggcaac aatacttgct
     1261 gcacggtgag cgccccaagc taaaggaaca ctagccggta gatcgacatg tcgataatgt
     1321 gatgttgcaa tatcgcctat tgcataaatg tttggaacat ttgtttcaaa tttatcgttt
     1381 accggtatga aaccttttcg atcaagtttg atatttgaac tttcgataaa ttttgaattg
     1441 gggtgagtac cgacaccttc aataatcata tcgtaatgtt caacttttcc tgatttaaat
     1501 gtaatttcat ttccattgat agcattaatt tcctcattta aacggtatgg aatctcccgc
     1561 ttatctaatt catcaagtat aggttgattc atgtcggcat ccattaattt atttatctta
     1621 tcagatcgat gaattaaagt agggtgtaaa ccacgttcat aaagattttc aagaacttct
     1681 aatgaaacat aacctgcacc tacaaccaat actttatcaa cttgatttgc tttgatgaat
     1741 tgatcgatag catcagtgtc ttctaaattt ctaagtgtaa atgtaatatc actttcaaag
     1801 ccaaggctat ttgcacttgc accagggctt aaaatgagtt tatcgtaaga ttcttcaaat
     1861 tgttcgtttg tctttctatt taatacagat acagtttgtc tttcatcatt gattgcaata
     1921 acttcatgat aagtttttac tgtaatttgc tttctatcat aaaatttttc aggtgtatac
     1981 gctaaagcat atcttctatc ttcaacaact tcgccaatga cataaggcaa tgcacaatta
     2041 gcaaagctca tatcacgatc tttttcaaaa ataataatgt cactttcttt atctaaacgt
     2101 cgaatttggc tggcacatgt tgcaccgcca gcgactgctc cgactacgac tattttgggc
     2161 atcgtaactt acctcctatt gttttaaaat attataaaat gattagttat aaattaacag
     2221 taatatctaa tatttaaatt aaagaaatca ttcaaatatc gaccaatgcc atcttcatta
     2281 ttgttgaatg taatattgtt cgctacatct ttaagttctt gcaaaccatt ttccatagca
     2341 acaccgtgac gcgcgtactc aatcatttca atatcattat cttcatcacc gaatgcaata
     2401 atattatttc ggtcaatatt taaaaattgt ctaacttgct caatgcctct tgctttatta
     2461 ataccaagtt ttacaatttc aatgacaggg aatggtgcgc cccagcgtcg atgctcaata
     2521 tgatcggcat aaaaatgagt aagcatattt ttgatttcag gtattttact ttcttcggct
     2581 tcaattaaaa ttgaggtagg ggattctttc aagtggacaa gtaaattacc agtttgaatt
     2641 cttggattac ccattgaaaa accttcaaat aatcttggat catgattgtt aatgaaaaca
     2701 taatctttca cttctgctat aatattcgat acttgatatt gttgtaatcc ttgaataatg
     2761 ttttgtgcga tgcctaaatc taaaatttca tggcaagttt tgaagttttt atctttaggg
     2821 tgatgtacgt aagcgccatt aaaattaaca attggtgtcg ttaaatttaa ttcatgataa
     2881 tacatttgac ttgcacgata aggtctgcca gtcgcaatca taatttggtg tccacgttgt
     2941 tgtaattcat ttaatacttg tttagtatat gatgaaattt ctttgttatc gtttaataat
     3001 gttccgtcta agtctagaca tattaaatgt ggttgcatat ctctctcctc ataagttgct
     3061 tagttcatat agatacatca tagcatttta ttggcgtttt gtcggatatt tgatatatta
     3121 tgaataatat gacattaaag aggtgatatg gatggaagag gcattgaaag atagtatctt
     3181 aggtgcatta gaaatggtaa ttgaccctga attaggaatt gatatcgtta atttgggttt
     3241 agtatacaaa gtgaatgttg atgatgaagg cgtatgtaca gttgatatga ctttaacatc
     3301 aatgggatgt ccaatgggac ctcaaattat tgatcaagtt aaaacagtat tagcagagat
     3361 tcctgaaatt caggatactg aagtgaatat cgtatggagt ccaccttgga caaaagatat
     3421 gatgtcacgt tacgctaaga ttgcacttgg tgtgagctaa cataaacttg cattgcctgt
     3481 agaatttctt ttcgaaattc tctgtgtttg ggcccgcagt caatataaca ttgtagagta
     3541 taattcattg tgaataagct cccttcaaag tagacattga aaaatgaaaa ttttgaaggg
     3601 agccttattt atgttctagt ttctgatttt attttgaaaa tttatatcta acttgtttca
     3661 aaaaatatga attaagacag tgacttgcac ttccaagagt gcacaattca ttttctattt
     3721 gaata
//
LOCUS       DALPQQ010000169         3651 bp    DNA     linear   BCT 22-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus strain K18-6-464
            SAMD00233528-rid16434743.denovo.171, whole genome shotgun sequence.
ACCESSION   DALPQQ010000169 DALPQQ010000000
VERSION     DALPQQ010000169.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMD00233528
            Sequence Read Archive: DRR236061
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 3651)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3651)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001543423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001543423.1
            Genome Coverage       :: 77x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/22/2022 17:09:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,811
            CDSs (total)                      :: 2,743
            Genes (coding)                    :: 2,689
            CDSs (with protein)               :: 2,689
            Genes (RNA)                       :: 68
            rRNAs                             :: 2, 4, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 4, 2 (16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 54
            CDSs (without protein)            :: 54
            Pseudo Genes (ambiguous residues) :: 0 of 54
            Pseudo Genes (frameshifted)       :: 27 of 54
            Pseudo Genes (incomplete)         :: 27 of 54
            Pseudo Genes (internal stop)      :: 10 of 54
            Pseudo Genes (multiple problems)  :: 10 of 54
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3651
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMD00233528-rid16434743.denovo.171"
                     /strain="K18-6-464"
                     /db_xref="taxon:1280"
                     /geo_loc_name="Japan: Niigata"
     gene            38..994
                     /locus_tag="O7798_002453"
     CDS             38..994
                     /locus_tag="O7798_002453"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498705.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate/phosphite/phosphonate ABC transporter
                     substrate-binding protein"
                     /protein_id="HDC2864647.1"
                     /translation="MKNFKCLFVLMLAVIVFAAACGNSSSLDNQKNASNDSDSKSGGY
                     KPKELTVQFVPSQNAGTLEAKAKPLEKLLSKELGIPVKVSVSTNYNTIVEAMKSKKVD
                     VGFLPPTAYTLAHDQKAADLLLQAQRFGVKEDGSASKELVDSYKSEILVKKDSKIKSL
                     KDLKGKKIALQDVTSTAGYTFPLAMLKNEAGINATKDMKIVNVKGHDQAVISLLNGDV
                     DAAAVFNDARNTVKKDQPNVFKDTRILKLTQAIPNDTISVRPDMDKDFQEKLKKAFID
                     IAKSKEGHKIISEVYSHEGYTETKDSNFDIVREYEKLVKDMK"
     gene            1208..1981
                     /gene="phnC"
                     /locus_tag="O7798_002454"
     CDS             1208..1981
                     /gene="phnC"
                     /locus_tag="O7798_002454"
                     /EC_number="7.3.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498704.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphonate ABC transporter ATP-binding protein"
                     /protein_id="HDC2864648.1"
                     /translation="MSQIEFKNVSKVYPNGHVGLKNINLNIEKGEFAVIVGLSGAGKS
                     TLLRSVNRLHDITSGEIFIQGKSITKAHGKALLEMRRNIGMIFQHFNLVKRSSVLRNV
                     LSGRVGYHPTWKMVLGLFPKEDKIKAMDALERVNILDKYNQRSDELSGGQQQRISIAR
                     ALCQESEIILADEPVASLDPLTTKQVMDDLRKINQELGITILINLHFVDLAKEYGTRI
                     IGLRDGEVVYDGPASEATDDVFSEIYGRTIKEDEKLGVN"
     gene            1983..2783
                     /gene="phnE"
                     /locus_tag="O7798_002455"
     CDS             1983..2783
                     /gene="phnE"
                     /locus_tag="O7798_002455"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498703.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphonate ABC transporter, permease protein
                     PhnE"
                     /protein_id="HDC2864649.1"
                     /translation="MPLEIPTKYDSLLKKKVSLKTSFTFMLIIVLIIWSFIYTGFNFG
                     DLMIGIPQIGDLFKQMIPPDFEYLQQITTPMLDTIRMAIVSTVLGSIVSIPIALLCAS
                     NIVHQKWISIPSRFILNIVRTIPDLLLAAIFVAVFGIGQIPGILALFILTICIIGKLL
                     YESLETIDPGPMEAMTAVGANKIKWIVFGVVPQAISSFMSYVLYAFEVNIRASAVLGL
                     VGAGGIGLFYDQTLGLFQYPKTATIILFTLVIVVVIDYISTKVRAHLA"
     gene            2780..3595
                     /gene="phnE"
                     /locus_tag="O7798_002456"
     CDS             2780..3595
                     /gene="phnE"
                     /locus_tag="O7798_002456"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498702.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphonate ABC transporter, permease protein
                     PhnE"
                     /protein_id="HDC2864650.1"
                     /translation="MTQEIAKYNVHTKAHKRKLIKRWLIAIVVLAIIIWAFAGVPSLE
                     LKSKSLEILKSIFSGLFHPDISYIYIPDGEDLLRGLLETFAIAVVGTFIAAIICIPLA
                     FLGANNMVKLRPVSGVSKFILSVIRVFPEIVMALIFIKAVGPGSFSGVLALGIHSVGM
                     LGKLLAEDIEGLDFSAVESLKASGANKIKTLVFAVIPQIMPAFLSLILYRFELNLRSA
                     SILGLIGAGGIGTPLIFAIQTRSWDRVGIILIGLVLMVAIVDLISGSIRKRIV"
BASE COUNT         1259 a          578 c          663 g         1151 t
ORIGIN      
        1 attacacgat taagaatgtg aaggggacag ttatcaaatg aaaaatttta agtgtttatt
       61 tgtattaatg ttagcagtca ttgtttttgc agcagcatgt ggaaactcaa gttctttaga
      121 taatcaaaag aacgctagta atgattcgga ttctaaatca ggaggataca aacctaaaga
      181 attaaccgtt caatttgtac cttcgcaaaa tgctggaaca ttagaagcta aagcaaaacc
      241 attagaaaaa ttactatcta aagaattagg gattccagtt aaagtgtctg tatcaactaa
      301 ctacaataca attgttgaag ctatgaagtc taaaaaagtt gatgttggtt tcttaccacc
      361 aacggcatac acattagcac atgatcaaaa agcagctgat ttattattac aagcacaacg
      421 tttcggtgta aaagaagatg gttcagcaag taaagaactt gtagatagtt ataaatcaga
      481 aattcttgtt aaaaaagact caaaaattaa aagcttgaaa gatttaaaag gtaagaaaat
      541 tgccttacaa gatgtaacat caactgctgg atatacattc ccacttgcga tgttaaaaaa
      601 cgaagcaggt attaatgcaa ctaaagatat gaaaattgtg aatgttaaag gtcatgacca
      661 agcagttatc tcattattaa atggagatgt agatgctgcg gctgtattta acgatgcacg
      721 taatactgtg aaaaaagacc aaccaaatgt atttaaagac acacgaattt taaaattaac
      781 acaagctatt ccgaatgaca caatttctgt aagaccagat atggataaag attttcaaga
      841 aaaattgaaa aaagctttta tagacattgc taaatcaaaa gaaggtcaca aaattattag
      901 cgaagtttat tcacatgaag gatacacaga aacgaaagat tcaaatttcg acattgtaag
      961 agagtacgaa aaattagtta aagatatgaa ataatcatta tttaacaaat gaatcattag
     1021 cgaatttggt attaaaagct ttcgttcaat agatatattc tagattaata ttgaaaagct
     1081 aggcgctaaa ctgaaacaga tatagaaagg tgtcgctgta catttgaaac catttgtaca
     1141 cagaaaccca atgtctatga tatttcagtt taccttggct tttctttatt aaagaaaggt
     1201 gtcaaacatg agtcaaatcg aatttaaaaa cgtcagtaaa gtctatccta acggtcatgt
     1261 aggcttgaaa aatattaact taaatattga aaaaggtgaa tttgcagtta ttgtcggact
     1321 atctggtgct gggaaatcca cgttattaag atctgtaaat cgtttgcatg atatcacgtc
     1381 aggtgaaatt ttcatccaag gtaaatcaat cactaaagcc catggtaaag cattattaga
     1441 aatgcgccga aatataggta tgattttcca acattttaat ttagttaaac ggtcaagtgt
     1501 attacgaaat gtactaagtg gacgtgtagg ttatcaccct acttggaaaa tggtattagg
     1561 tttattccca aaagaagaca aaattaaggc aatggatgca ctagaacgcg tcaatatctt
     1621 agataaatat aatcaacgct ctgatgaatt atcaggtggc caacaacaac gtatatctat
     1681 tgcacgtgcg ctatgccaag aatctgaaat tattcttgca gatgaaccag ttgcttcatt
     1741 agacccatta actacgaaac aggttatgga tgatttaaga aaaatcaacc aagaattagg
     1801 catcacaatt ttaattaatt tacattttgt tgacttggca aaagaatatg gcacacgcat
     1861 cattggttta cgtgatggtg aagttgtcta tgatggtcct gcatctgaag caacagatga
     1921 cgtatttagt gaaatatatg gacgtacaat taaagaagat gaaaagctag gagtgaacta
     1981 acatgccttt agaaatacct acaaagtatg actccctttt aaagaaaaag gtttctttaa
     2041 aaacgagttt taccttcatg ttaatcattg tgcttatcat ttggagcttc atttatacgg
     2101 gatttaattt tggagattta atgataggaa tacctcaaat aggtgatcta ttcaaacaaa
     2161 tgattccacc tgatttcgag tatttacaac aaattacaac gccaatgtta gataccattc
     2221 gaatggctat cgtaagtaca gtattaggta gcatcgtttc aataccaatt gcgttattat
     2281 gtgctagcaa tatcgttcat caaaagtgga tttcaatacc ctcgcgcttt attttaaata
     2341 tagttcgtac tattccagat ttgttattag cagcaatctt tgtggctgta tttggaatcg
     2401 gtcaaattcc agggatatta gcactgttta ttttaactat ctgtattatt ggaaaattat
     2461 tatatgaatc attggaaacg atagatccag gtccaatgga agcaatgacg gctgttggcg
     2521 ctaataaaat aaaatggatt gttttcggtg ttgtaccaca agccatatcg tcatttatgt
     2581 catacgtatt atatgcattt gaagtaaata tacgtgcttc agctgtgctt ggattagtcg
     2641 gcgctggcgg tattggattg ttttatgatc aaacacttgg tttatttcaa tatccaaaaa
     2701 cagcaacgat tattttattt actttagtta tcgtcgtcgt cattgattac atcagtacga
     2761 aagtgagggc acatctcgca tgacacagga aatagcaaaa tataatgttc acacaaaagc
     2821 acacaaacga aaattgatta aaagatggct tattgcaatt gtcgtcttag ctattatcat
     2881 ctgggcattt gcaggtgtac caagtttaga acttaaaagt aaatcattag aaatcttaaa
     2941 atccatattc agcggattat tccatcctga tatcagctat atctatatac cagatggcga
     3001 agacttatta cgtggtttac ttgaaacctt tgcgatagcc gttgtaggta ctttcatcgc
     3061 cgcaattatc tgtattccat tagcatttct aggtgcaaat aatatggtaa agctacgccc
     3121 agtttcaggt gttagcaaat ttattttaag tgttatacgt gtcttcccag aaattgtaat
     3181 ggcacttata tttatcaaag ctgttggccc aggttcattt tcaggtgtat tagctttagg
     3241 tatccattcc gtaggtatgc ttgggaaact tttagctgaa gatattgaag gtctagattt
     3301 cagtgctgta gaatcattaa aggccagtgg tgcgaataag attaaaacac tcgtatttgc
     3361 agtcatacca caaattatgc ctgcctttct atcactcata ctttatcgct ttgaactaaa
     3421 cttacgttca gcttctatac tggggctaat tggggctggt ggtatcggga caccactcat
     3481 atttgccatt caaacacgtt cttgggaccg tgtaggtatt atattaatcg gtttagtact
     3541 aatggtcgca attgtcgatt taatttccgg ttcaatccga aaacgtattg tttaacatta
     3601 aatcaggata ctcctaaata agaagtccta ccgtcttacg tttctctatt a
//
LOCUS       DALPQQ010000170         3548 bp    DNA     linear   BCT 22-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus strain K18-6-464
            SAMD00233528-rid16434743.denovo.172, whole genome shotgun sequence.
ACCESSION   DALPQQ010000170 DALPQQ010000000
VERSION     DALPQQ010000170.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMD00233528
            Sequence Read Archive: DRR236061
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 3548)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3548)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001543423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001543423.1
            Genome Coverage       :: 77x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/22/2022 17:09:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,811
            CDSs (total)                      :: 2,743
            Genes (coding)                    :: 2,689
            CDSs (with protein)               :: 2,689
            Genes (RNA)                       :: 68
            rRNAs                             :: 2, 4, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 4, 2 (16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 54
            CDSs (without protein)            :: 54
            Pseudo Genes (ambiguous residues) :: 0 of 54
            Pseudo Genes (frameshifted)       :: 27 of 54
            Pseudo Genes (incomplete)         :: 27 of 54
            Pseudo Genes (internal stop)      :: 10 of 54
            Pseudo Genes (multiple problems)  :: 10 of 54
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3548
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMD00233528-rid16434743.denovo.172"
                     /strain="K18-6-464"
                     /db_xref="taxon:1280"
                     /geo_loc_name="Japan: Niigata"
     gene            complement(115..327)
                     /locus_tag="O7798_002457"
                     /pseudo
     CDS             complement(115..327)
                     /locus_tag="O7798_002457"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001625397.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="zinc peptidase"
     gene            complement(402..1937)
                     /locus_tag="O7798_002458"
     CDS             complement(402..1937)
                     /locus_tag="O7798_002458"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498707.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional metallophosphatase/5'-nucleotidase"
                     /protein_id="HDC2864651.1"
                     /translation="MSNIAFYVVSDVHGYIFPTDFTSRNQYQPMGLLLANHVIEQDRR
                     QYDQSFKIDNGDFLQGSPFCNYLIAHSGSSQPLVDFYNRMAFDFGTLGNHEFNYGLPY
                     LKDTLRRLNYPVLCANIYENDSTLTDNGVKYFQVGDQTVGVIGLTTQFIPHWEQPEHI
                     QSLTFHSAFEILQQYLPEMKRHADIIVVCYHGGFEKDLESGTPTEVLTGENEGYAMLE
                     AFSKDIDIFITGHQHRQIAERFKQTAVIQPGTRGTTVGRVVLSTDEYENLSVESCELL
                     PVIDDSTFTIDEDDQHLRKQLEDWLDYEITTLPYDMTINHAFEARVAPHPFTNFMNYA
                     LLEKSDADVACTALFDSASGFKQVVTMRDVINNYPFPNTFKVLAVSGAKLKEAIERSA
                     EYFDVKNDEVSVSADFLEPKPQHFNYDIYGGVSYTIHVGRPKGQRVSNMMIQGHAVDL
                     KQTYTICVNNYRAVGGGQYDMYIDAPVVKDIQVEGAQLLIDFLSNNNLMRIPQVVDFK
                     VEK"
     gene            complement(1988..3532)
                     /locus_tag="O7798_002459"
     CDS             complement(1988..3532)
                     /locus_tag="O7798_002459"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498706.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding protein"
                     /protein_id="HDC2864652.1"
                     /translation="MKKIYKSLTVSAIVATVSLSALPQSLAITHESQPTKQQRTVLFD
                     RSHGQTAGAADWVSDGAFSDYADSIQKQGYDVKAIDGHSNITEASLKSSKIFVIPEAN
                     IPFKESEQAAIVKYVKQGGNVVFISDHYNADRNLNRIDSSEAMNGYRRGAYEDMSKGM
                     NAEEKSSTAMQGVKSSDWLSTNFGVRFRYNALGDLNTSNIVSSKESFGITEGVKSVSM
                     HAGSTLAITNPEKAKGIVYTPEQLPAKSKWSHAVDQGIYNGGGKAEGPYVAISKVGKG
                     KAAFIGDSSLVEDSSPKYVREDNGEKKKTYDGFKEQDNGKLLNNITAWMSKDNDGKSL
                     KASSLTLDTKTKLLDFERPERSTEPEKEPWSQPPSGYKWYDPTTFKAGSYGSEKGADP
                     QPNTPDDHTPPNQNEKVTFDIPQNVSVNEPFEMTIHLKGFEANQTLENLRVGIYKEGG
                     RQIGQFSSKDNDYNPPGYSTLPTVKADENGNVTIKVNAKVLESMEGSKIRLKLGDKTL
                     ITTDFK"
BASE COUNT         1063 a          718 c          536 g         1231 t
ORIGIN      
        1 aaaaaaacag gaaaacaaat ttcaagtaaa agaataccca tacaaagagg ataaaataaa
       61 aaacctcgaa ctgaaatgat gatcttttca gctcgaggtt taaatattgg tgccttattt
      121 atatagattc gttatattat attctctatt ttcattaaca taatccttaa agagttttaa
      181 attaatacct gctagatgat tcaaaaatgt ttcatcaact tttaaataat tcaataattt
      241 ttgtggtgtc agtaaatttc tatcaaaata caactttaat aaactattca ttttgacagg
      301 acgtgacatt tcaatcacgt cgtctaaaga taatactttc tcgctttaaa caaaaacaaa
      361 aacttacccg attaaaatca agtaagtttt acatatatcc gtcacttttc aactttaaaa
      421 tcaacaactt gcgggatgcg catcaaatta ttatttgata aaaaatcaat aagtaattgt
      481 gcgccttcaa cttgaatatc ttttacaact ggcgcgtcga tatacatatc atactgacca
      541 ccgcctactg cacgataatt atttacacaa attgtatatg tctgctttaa atcaactgcg
      601 tgaccttgaa tcatcatatt gctcacacgt tgtccctttg gtcttccaac atgaatggta
      661 taacttacgc caccatatat atcataatta aagtgttgtg gtttgggttc aaggaagtct
      721 gcgctcacac taacttcatc atttttcacg tcaaaatatt ctgctgatcg ttcaatggct
      781 tctttaagtt tggcaccact tacagctaaa actttaaatg tatttggaaa tgggtaattg
      841 ttaataacat ctcgcatcgt cacgacttgc ttgaaaccac tagcagaatc aaacaaagct
      901 gtacaggcaa catctgcgtc acttttttct aataaagcgt aattcataaa atttgtaaaa
      961 ggatgcggtg ccacacgtgc ctcaaatgca tgattaatcg tcatatcata tggcaatgta
     1021 gtaatttcgt aatctaacca gtcctctaac tgctttcgta aatgttggtc atcttcatca
     1081 atagtaaatg tggaatcatc tataacagga agtaattcac atgattcaac ggatagattt
     1141 tcatattcat cagtactcaa gactactctg cctacagttg tacctctcgt accaggttga
     1201 atcacagccg tttgcttaaa cctttcagca atttgtcgat gttggtgacc cgtaataaag
     1261 atatctatat ctttagaaaa cgcttctaac atggcatatc cttcattttc acccgttaat
     1321 acttcggtcg gcgtaccact ttctaaatcc ttttcaaatc caccatggta acaaaccaca
     1381 atgatatctg catgtcgctt catttcaggt aagtattgtt gaagtatttc aaaagcacta
     1441 tgaaacgtaa gtgactgaat atgctctggt tgttcccaat ggggaataaa ttgtgtcgtt
     1501 aaacctatca caccaacagt ttgatctcca acctgaaaat acttcacacc gttatcagtc
     1561 aatgtactat cattttcata tatattagcg cacaaaactg gataattgag tctgcgtaaa
     1621 gtgtctttta agtatggtaa tccataatta aattcatgat taccaagcgt accaaagtcg
     1681 aatgccattc gattataaaa atcaactaaa ggctggctac tgccgctatg cgcgattaag
     1741 taattacaaa atggtgaccc ttgcaaaaaa tcaccattat ctattttaaa actttggtca
     1801 tactgccttc tgtcttgttc tataacatga ttcgctagta acaatcccat aggttgatat
     1861 tgatttctac tcgtaaaatc tgttgggaaa atataaccat gtacgtcact cacgacataa
     1921 aatgctatgt ttgacatcct cactcactcc ttcaatcaca aacatctttc ttatttctat
     1981 tatatattta tttgaagtct gttgtaatca aggttttgtc accgagtttt aaacgaatct
     2041 ttgaaccttc catactttca agtactttag cattgacctt aattgtgaca tttccgtttt
     2101 catctgcttt aactgttggc aaagtactgt aacctggtgg gttataatcg ttatctttac
     2161 ttgaaaattg tccgatttga cgtccgcctt ctttgtaaat accaactcta agattttcaa
     2221 gtgtttgatt tgcttcaaat ccttttaaat gtattgtcat ttcaaatggc tcatttacag
     2281 aaacattttg cgggatatca aatgttactt tttcgttctg atttggtggt gtatgatcat
     2341 ctggtgtgtt tggctgagga tctgcgcctt tttcgctgcc ataactacct gctttaaatg
     2401 ttgttggatc ataccattta taaccactcg gcggttgtga ccatggctct ttttcaggct
     2461 cagttgaacg ctctggtcgt tcaaaatcaa gcaacttagt ctttgtatct aatgttaggc
     2521 tactcgcctt aagtgatttc ccatcattat ctttagacat ccaagccgtt atattattta
     2581 atagcttacc gttgtcttgt tctttaaaac catcatatgt tttcttcttt tctccattat
     2641 cttctcttac atatttgggc gaactatctt ccacaagtga tgaatcaccg ataaatgctg
     2701 ctttaccttt tccaacttta gaaattgcta cataggggcc ttctgcttta ccgcccccat
     2761 tataaatacc ttgatctaca gcatgtgacc atttactttt cgctggcaat tgttctggtg
     2821 tatacacaat accttttgct ttctctggat tagtaattgc taatgtcgat ccggcatgca
     2881 tagagacaga tttcacacct tcagtaatac cgaaactttc ttttgaagaa acaatattgc
     2941 tcgtatttaa atcacctagt gcattatatc gaaaacgtac gccaaagttt gtagataacc
     3001 aatctgaact tttcacacct tgcattgcag tagaactttt ttcttctgca ttcatacctt
     3061 tcgacatatc ttcatatgct ccacgtcgat aaccattcat tgcctccgat gaatcaatac
     3121 gatttaaatt tcggtcagca ttgtaatgat ctgaaataaa gacaacattg ccaccttgtt
     3181 tcacatattt aacaattgct gcctgttctg attctttgaa aggaatgtta gcctcaggaa
     3241 ttacaaatat tttggaactt ttcaaacttg cttctgttat gttcgaatga ccatcaatag
     3301 ctttaacgtc ataaccttgt ttttgtattg aatccgcata atctgaaaat gcaccatcac
     3361 taacccaatc tgcagcacca gctgtttgac catgagaacg atcgaataat accgttcgct
     3421 gttgctttgt aggttgcgat tcatgcgtta tagctaaaga ttgcggtaaa gcacttaatg
     3481 ataccgttgc aacaattgca gagacagtta atgacttata tatttttttc attttgtgag
     3541 gctccttt
//
LOCUS       DALPQQ010000171         3542 bp    DNA     linear   BCT 22-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus strain K18-6-464
            SAMD00233528-rid16434743.denovo.173, whole genome shotgun sequence.
ACCESSION   DALPQQ010000171 DALPQQ010000000
VERSION     DALPQQ010000171.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMD00233528
            Sequence Read Archive: DRR236061
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 3542)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3542)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001543423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001543423.1
            Genome Coverage       :: 77x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/22/2022 17:09:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,811
            CDSs (total)                      :: 2,743
            Genes (coding)                    :: 2,689
            CDSs (with protein)               :: 2,689
            Genes (RNA)                       :: 68
            rRNAs                             :: 2, 4, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 4, 2 (16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 54
            CDSs (without protein)            :: 54
            Pseudo Genes (ambiguous residues) :: 0 of 54
            Pseudo Genes (frameshifted)       :: 27 of 54
            Pseudo Genes (incomplete)         :: 27 of 54
            Pseudo Genes (internal stop)      :: 10 of 54
            Pseudo Genes (multiple problems)  :: 10 of 54
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3542
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMD00233528-rid16434743.denovo.173"
                     /strain="K18-6-464"
                     /db_xref="taxon:1280"
                     /geo_loc_name="Japan: Niigata"
     gene            141..866
                     /locus_tag="O7798_002460"
     CDS             141..866
                     /locus_tag="O7798_002460"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499670.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="superantigen-like protein SSL14"
                     /protein_id="HDC2864653.1"
                     /translation="MKKNIMNKLVLSTALLLLETTSTQLPKTPISFSSEAKAYNISEN
                     ETNINELIKYYTQPHFSLSGKWLWQKPNGSIHATLQTWVWYSHIQVFGSESWGNINQL
                     RNKYVDIFGTKDEDTVEGYWTYDETFTGGVTPAATSSDKPYRLFLKYSDKQQTIIGGH
                     EFYKGNKPVLTLKELDFRIRQTLIKNKKLYNGEFNKGQIKITADGNNYTIDLSKKLKL
                     TDTNRYVKNPRNAEIEVILEKSN"
     gene            961..1686
                     /locus_tag="O7798_002461"
     CDS             961..1686
                     /locus_tag="O7798_002461"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499669.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="superantigen-like protein SSL13"
                     /protein_id="HDC2864654.1"
                     /translation="MNNNITKKIILSTTLLLLGTASTQFPNTPINSSSEAKAYYINQN
                     ETNVNELTKYYSQKYLTFSNSTLWQKDNGTIHATLLQFSWYSHIQVYGPESWGNINQL
                     RNKSVDIFGIKDQETIDSFALSQETFTGGVTPAATSNDKHYKLNVTYKDKAETFTGGF
                     PVYEGNKPVLTLKELDFRIRQTLIKSKKLYNNSYNKGQIKITGADNNYTIDLSKRLPS
                     TDANRYVKKPQNAKIEVILEKSN"
     gene            1794..2510
                     /locus_tag="O7798_002462"
     CDS             1794..2510
                     /locus_tag="O7798_002462"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499668.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="superantigen-like protein SSL12"
                     /protein_id="HDC2864655.1"
                     /translation="MSKNITKNIILTTTLLLLGTVLPQNQKPVFSFYSEAKAYSIGQD
                     ETNINELIKYYTQPHFSFSNKWLYQYDNGNIYVELKRYSWSAHISLWGAESWGNINQL
                     KDRYVDVFGLKDKDTDQLWWSYRETFTGGVTPAAKPSDKTYNLFVQYKDKLQTIIGAH
                     KIYQGNKPVLTLKEIDFRAREALIKNKILYNENRNKGKLKITGGGNNYTIDLSKRLHS
                     DLANVYVKNPNKITVDVLFD"
     gene            complement(3067..3291)
                     /locus_tag="O7798_002463"
     CDS             complement(3067..3291)
                     /locus_tag="O7798_002463"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499667.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDC2864656.1"
                     /translation="MLIQERGLKMTELNNIINSLQSLFESESGYKISKNSGVPYQTVQ
                     DLRNGKTKLEDARFRTIIKLYSYYVSLKEH"
     gene            complement(3248..3394)
                     /locus_tag="O7798_002464"
     CDS             complement(3248..3394)
                     /locus_tag="O7798_002464"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499666.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDC2864657.1"
                     /translation="MKLFYIVFLIIIWLNIFLGNEIIHTLTVLITTLYIVNSRKGIKN
                     DRVE"
BASE COUNT         1320 a          549 c          507 g         1166 t
ORIGIN      
        1 aaacttaaaa atgataagtt ttgcttaaat aacactacta actgtttaag tttatttaac
       61 atagttttag cttttattta attccgaatc ggtgtaatag cttatatact ttgggtaatt
      121 cacgcaaagg agattttcat atgaaaaaga acatcatgaa taaattagtt ttatcaacag
      181 cattgttact tttagaaact acatcaacac aacttcctaa aacaccaatc agtttttcat
      241 ctgaagcaaa agcctataat atcagtgaaa acgagactaa tatcaatgaa ctaatcaaat
      301 attacactca gccgcatttt tcattatctg gaaaatggtt atggcaaaag cccaatggta
      361 gcattcatgc aacattgcaa acgtgggttt ggtatagtca tattcaagtg tttggatccg
      421 agagttgggg aaacattaat cagttaagaa ataaatacgt tgatatattt ggaactaaag
      481 atgaggacac agttgaaggt tactggactt atgatgaaac atttactggt ggtgttacgc
      541 cagcagctac ttcatctgat aagccttata gactattttt aaaatatagt gataaacaac
      601 aaactatcat cggtggacat gaattttaca aaggaaataa accagtatta actttaaaag
      661 aattagattt ccgtattcgt caaacattaa taaaaaataa aaagttatat aacggagaat
      721 ttaataaagg tcaaattaag ataactgctg atggaaataa ttacacgatt gatttaagta
      781 aaaagttaaa attaactgac acaaaccgtt atgttaaaaa tcctcgtaat gcagaaattg
      841 aagtcatact cgaaaaatct aactaaccta ttaccttttg taaatgcgga taatttcaat
      901 tatctaatta accccttttt ataattaaac attccaacaa tactcaaagg agaaattcga
      961 atgaacaata acatcacgaa aaaaattatt ttatcaacaa cattgttact attaggtaca
     1021 gcatctacac aatttcctaa tacacctatc aattcttcat ctgaagcgaa agcttattat
     1081 ataaatcaaa acgaaactaa cgttaatgag ttaactaaat attactcgca aaaatattta
     1141 accttctcta acagtacgtt atggcaaaaa gataacggta cgattcatgc aacgttgtta
     1201 cagttttctt ggtatagtca tattcaagtt tatggacctg aaagttgggg caatatcaac
     1261 caattaagaa ataaaagcgt tgatattttt ggcataaaag accaagaaac cattgattct
     1321 tttgcattat ctcaagaaac gtttactggt ggtgttactc ctgcagcaac atctaacgat
     1381 aaacactata aactgaatgt aacatataaa gataaagcag aaacgtttac tggcggattt
     1441 ccagtttatg aaggcaataa gcctgtttta actttaaaag aattagattt tcgtattcgt
     1501 caaacattaa ttaaaagtaa aaaattatat aataattctt ataataaagg acaaattaaa
     1561 ataacaggtg cagacaataa ctacacaata gatttaagta aaaggttgcc atcaactgat
     1621 gcaaatagat atgttaaaaa acctcaaaat gcaaaaattg aagttatcct cgaaaaatca
     1681 aactaacaat aataatggag ttaataaaaa taatcgcaaa tactatattg acttcgctca
     1741 catttaaatt tcttattcct cgtatcatga ttcctctgaa aggagatgtt ctaatgagta
     1801 agaacatcac gaaaaatata attttaacga caacattatt actattaggt actgtattac
     1861 ctcaaaatca aaaaccagta tttagttttt actctgaagc taaagcttat agcattggtc
     1921 aagatgaaac taacatcaat gaattaatta aatattacac acagcctcat ttttcatttt
     1981 caaataaatg gctatatcaa tatgataatg gaaacattta tgttgaactt aagagatatt
     2041 catggtcagc acatatatct ttatggggcg ctgaaagttg gggaaatatt aatcagttaa
     2101 aagatcgtta cgtagatgtg tttggactaa aagacaaaga tactgatcag ttatggtggt
     2161 cttatagaga gacatttaca ggtggcgtta caccagccgc aaaaccttct gataaaactt
     2221 ataatctttt tgtgcaatac aaagataaac tacaaacgat tattggtgcg cataaaatat
     2281 accaaggcaa taaaccagta ttaacattga aagaaatcga tttccgtgca cgagaagcgt
     2341 taataaaaaa taaaatatta tataacgaaa atcgtaataa aggtaagctt aagatcaccg
     2401 gtggcggtaa taactacact attgatttaa gcaaaagatt acattcagat ctagcaaatg
     2461 tttatgttaa aaatcctaat aaaataactg ttgacgtcct ctttgattag tatatgaagg
     2521 tgacttatac ttcatgcact ttaattccaa atcagattat ttaaatgata atttttaaag
     2581 tgtatgatgt atataatagg taaaattttc tatatattta aatggaattg ggagtaggaa
     2641 tgtgacagaa atagtatttt ataaaattta tttcgttgtc actccccaac ttgcacatta
     2701 ttgtaagctg actttccgcc agcttctatg ttggggcccc gccaacttgc attgtctgta
     2761 gaaattggga atccaatttc actatgttgg ggccccgcca acttgcacat tattgtaagc
     2821 tgacttttcg tcagcttctg tgttggggcc caccccaact tgcattgtct gtagaatttc
     2881 tttttgaaat tctctatgtt ggggccccgc ctataattga aaaatgcttg ttacatgggc
     2941 attttcattc ggtcaactac taccaatata atattgtaga gcctaagaca ttgatttatt
     3001 atgtcttagg ctctattcct tcatttaatg attaaattat tatagcaata ctttattgtc
     3061 ccatgattag tgttctttta atgagacata gtaactataa agtttaataa tcgttctaaa
     3121 tctagcatct tctagtttgg ttttcccatt tcttaaatct tgtactgttt gatatggaac
     3181 tcctgaattt ttcgaaattt tatagcctga ttcagactca aacaaagatt gaagagagtt
     3241 tataatatta ttcaactctg tcatttttaa tcccctttct tgaattaaca atatacaatg
     3301 ttgttattaa aacagtcagt gtatggatga tttcatttcc taaaaatata ttcagccata
     3361 taataataag aaatacgata taaaatagtt tcattttaat cccctatcat atttttatta
     3421 atcaaatttc aataagattc ataattaaaa gctaacctat actcaaaatt ttcttataat
     3481 gcctctaact aaaaacctac attttatttt acatataata ttttacacta tattaaaaat
     3541 ac
//
LOCUS       DALPQQ010000172         3441 bp    DNA     linear   BCT 22-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus strain K18-6-464
            SAMD00233528-rid16434743.denovo.174, whole genome shotgun sequence.
ACCESSION   DALPQQ010000172 DALPQQ010000000
VERSION     DALPQQ010000172.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMD00233528
            Sequence Read Archive: DRR236061
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 3441)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3441)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001543423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001543423.1
            Genome Coverage       :: 77x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/22/2022 17:09:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,811
            CDSs (total)                      :: 2,743
            Genes (coding)                    :: 2,689
            CDSs (with protein)               :: 2,689
            Genes (RNA)                       :: 68
            rRNAs                             :: 2, 4, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 4, 2 (16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 54
            CDSs (without protein)            :: 54
            Pseudo Genes (ambiguous residues) :: 0 of 54
            Pseudo Genes (frameshifted)       :: 27 of 54
            Pseudo Genes (incomplete)         :: 27 of 54
            Pseudo Genes (internal stop)      :: 10 of 54
            Pseudo Genes (multiple problems)  :: 10 of 54
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3441
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMD00233528-rid16434743.denovo.174"
                     /strain="K18-6-464"
                     /db_xref="taxon:1280"
                     /geo_loc_name="Japan: Niigata"
     gene            277..777
                     /locus_tag="O7798_002465"
     CDS             277..777
                     /locus_tag="O7798_002465"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015581778.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR01741 family protein"
                     /protein_id="HDC2864658.1"
                     /translation="MTFEEKLSEIYNKIANEISGMIPVEWDQVFTIAYVNDRGGEIVF
                     NYTKPGSDELNYYTYIPREYNVSEKVFYDLWTDLYRLFKKLRNAFKEEDLEPWTSCEF
                     DFTRDGKLNVVFDYVDWMNSEFGPIAKENYYMYKKFGVLPETEYEINKVKEIDQYVKE
                     QDEAEL"
     gene            789..1289
                     /locus_tag="O7798_002466"
     CDS             789..1289
                     /locus_tag="O7798_002466"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498868.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR01741 family protein"
                     /protein_id="HDC2864659.1"
                     /translation="MTFEEKLSQMYNKIASEISGMIPVEWEQVFTIAYVTDQAGEVIF
                     NYTKPGSDELNYYSDIPKDCNVSKDIFKNSWFKVYRMFDELRETFKEEELEPWTSCEF
                     DFTRDGKLNVSFDYIDWVNSEFGPMGREHYYMYKKFGIWPEKEYAINWVEKIKDYVKE
                     QDEAEL"
     gene            1300..1800
                     /locus_tag="O7798_002467"
     CDS             1300..1800
                     /locus_tag="O7798_002467"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498867.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR01741 family protein"
                     /protein_id="HDC2864660.1"
                     /translation="MTFEGKLSQMYNEIANEISGMIPVEWEQVFTIAYVTDQAGEVIF
                     NYTKPGSDDLNYYTDIPKEYNISVQVFDDLWMDLYDLFEELRDLFKEEGLEPWTSCEF
                     DFTSEGKLKVSFDYIDWINTEFDQLGRENYYMYKKFGVLPEMEYEMEEIKEIDQYIKE
                     QDEAEI"
     gene            1811..2311
                     /locus_tag="O7798_002468"
     CDS             1811..2311
                     /locus_tag="O7798_002468"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498868.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR01741 family protein"
                     /protein_id="HDC2864661.1"
                     /translation="MTFEEKISKLYNEIANEISSMIPVEWEKVYTMAYIDDGGGEVFF
                     NYTKPGSEDLNYYTDIPKEYNVSVQVFDDLWMDLYDLFKNLRNLFKEEGLEPWTSCEF
                     DFTRDGKLNVSFDYIDWANSEFGQMGREHYYMYKKFGIWPEKEYAINWVKKIKDYVKE
                     QDEAEL"
     gene            2322..2822
                     /locus_tag="O7798_002469"
     CDS             2322..2822
                     /locus_tag="O7798_002469"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498869.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR01741 family protein"
                     /protein_id="HDC2864662.1"
                     /translation="MTFEEKLSQMYNEIANEISGMIPVEWENIYTIAYVTDQGGEVIF
                     NYTKPGSDELNYYTYIPREYNVSEKVFYDLWTDLYRLFKKLRETFKEEGLEPWTSSEF
                     DFTSEGKLKVSFDYIDWINTEFDQLGRENYYMYKKFGVLPEMEYEMEEVKEIEQYIKE
                     QDEAEL"
     gene            2833..3321
                     /locus_tag="O7798_002470"
     CDS             2833..3321
                     /locus_tag="O7798_002470"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498870.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="antitoxin YezG family protein"
                     /protein_id="HDC2864663.1"
                     /translation="MTFEEKLSQMYNEIANEISGMIPVEWEKVYTIAYVDDEGGEVVF
                     NYTKPGSEDLNYYSDIPKDCNVSKDIFKNSWFKVYRMFDELRETFKKEDLEPWTSCEF
                     DFTRKGNLKVSFDYIDWIKLGFGPSGKENYYMYKKFGILPDMEYEMEEIRAVEKYVKE
                     QE"
BASE COUNT         1352 a          328 c          712 g         1049 t
ORIGIN      
        1 attataaata gttaaataaa tagaaagaca aaataatgag taggagtttt agggctatta
       61 tttacaaata atataatact gcaaagactc gaaattattt agaattccag ttatcgtaac
      121 aatagttgca gttattttag ttccattagt gtatttaggt ttaaaatgag taatattaat
      181 ttgaagaagc attaagcgac gtagaggtgt tgtttagtgc tttttattta acggaaatga
      241 aaccaatatc tattttgaaa atataggggc gataacatga ctttcgaaga aaaactaagt
      301 gaaatataca acaagattgc gaatgagatt agtgggatga taccagtaga atgggaccaa
      361 gtatttacga tagcttatgt aaatgataga ggtggagaga tcgtttttaa ttatactaaa
      421 ccaggtagcg atgaattgaa ttattacaca tatatcccta gagagtataa tgtctctgaa
      481 aaagtatttt atgatttgtg gacggattta tatagattgt ttaagaagtt aagaaacgca
      541 tttaaagaag aagatttaga accatggaca tcatgtgaat ttgactttac aagagatggt
      601 aaattgaatg ttgtatttga ttatgttgat tggatgaatt cagaatttgg tccaatagca
      661 aaagaaaatt attatatgta caaaaagttt ggtgttttac cagaaacgga atatgaaatt
      721 aataaagtta aagaaatcga tcaatatgtt aaagagcaag atgaagctga actatagggg
      781 gagataacat gactttcgaa gagaaactaa gtcaaatgta caataaaatt gcaagtgaga
      841 tcagtggaat gataccagta gaatgggagc aagtatttac aatagcttat gtaactgatc
      901 aagctgggga agtcattttt aattatacta aaccaggtag tgatgaatta aattattatt
      961 cagacatacc taaagattgc aatgtctcaa aagatatttt taagaattca tggtttaaag
     1021 tttatcgaat gtttgatgag ttaagagaaa cttttaaaga agaagagctt gaaccatgga
     1081 catcatgcga atttgacttt acaagagatg gcaaattgaa tgtatctttt gattatattg
     1141 attgggtgaa ttcagaattt ggaccaatgg gaagagaaca ttattatatg tataaaaaat
     1201 ttggaatttg gcctgaaaaa gaatatgcca taaattgggt tgaaaaaata aaagattatg
     1261 ttaaagagca agatgaagct gaactatagg ggagataata tgactttcga aggaaaacta
     1321 agtcaaatgt acaacgagat tgcgaatgag attagtggga tgataccggt agaatgggag
     1381 caagtattta caatagctta tgtaactgat caagctggag aagtcatctt taattatact
     1441 aaaccaggta gtgatgactt gaattattac accgatatac ctaaggagta taacatctct
     1501 gtgcaagtat ttgatgattt atggatggat ttatatgatt tgtttgagga attaagagat
     1561 ttatttaaag aagaaggact tgaaccatgg acatcatgtg aatttgactt tacaagcgaa
     1621 ggtaaattaa aagtttcatt tgattatata gattggataa atacagagtt tgatcaatta
     1681 ggccgtgaaa attattatat gtataaaaaa tttggggttt taccagaaat ggaatatgaa
     1741 atggaagaaa ttaaagaaat cgatcaatat attaaagagc aagatgaagc tgaaatatag
     1801 gggagataac atgactttcg aagagaaaat aagcaaatta tataatgaga ttgcgaatga
     1861 gattagcagt atgataccgg tagagtggga aaaagtatat acaatggctt atatagatga
     1921 tggaggaggt gaagtattct ttaattatac taaaccagga agtgaagatt tgaattatta
     1981 taccgatata cctaaggagt ataatgtttc tgtgcaagta tttgatgatt tatggatgga
     2041 tttatatgat ttgtttaaga atttaagaaa tttatttaaa gaagaaggac ttgaaccatg
     2101 gacatcatgt gaatttgact ttacaagaga cggcaaattg aatgtttcat ttgattatat
     2161 tgattgggcg aattcagagt ttggacaaat gggaagagaa cattattaca tgtataaaaa
     2221 atttggaatt tggcctgaaa aagaatatgc cataaattgg gtaaaaaaaa taaaagatta
     2281 tgttaaagag caagatgaag ctgaactata ggggcgataa tatgactttc gaagaaaaac
     2341 taagtcaaat gtacaatgaa attgcaaatg aaatcagtgg aatgatacca gttgaatggg
     2401 aaaatatata tacaattgcc tatgtaactg atcaaggtgg agaggtcatt tttaattata
     2461 ctaaaccagg tagcgatgaa ttgaattatt acacatatat ccctagagag tataatgtct
     2521 ctgaaaaagt attttatgat ttgtggacgg atttatatag attgtttaag aagttaagag
     2581 aaacttttaa agaagaaggg cttgaaccat ggacatcaag tgaatttgac tttacaagcg
     2641 aaggtaaatt aaaagtttca tttgattata ttgattggat aaatacagag tttgatcaat
     2701 taggccgtga aaactattat atgtataaaa agtttggtgt tttaccagaa atggaatacg
     2761 aaatggaaga agttaaagaa atcgagcaat atattaaaga gcaagatgaa gctgaactat
     2821 aggggcgata acatgacttt cgaagaaaag ctaagtcaaa tgtacaatga aattgcaaat
     2881 gaaatcagtg gaatgatacc agtagaatgg gaaaaagtat atacaattgc ctacgtagat
     2941 gatgaaggtg gagaggttgt ttttaattat actaaaccag gaagtgaaga tttgaattat
     3001 tattcagata ttcctaaaga ttgcaatgtc tcaaaagata tttttaagaa ttcatggttt
     3061 aaagtttatc gaatgtttga tgagttaaga gaaactttta aaaaagaaga tttagaaccg
     3121 tggacatcat gtgaatttga ctttacaaga aagggaaatt taaaagtatc atttgattat
     3181 atagattgga ttaaattagg ttttggccca tcaggaaagg aaaactacta tatgtacaaa
     3241 aaatttggta ttttaccaga tatggaatat gaaatggaag aaattcgagc agtagagaag
     3301 tatgttaaag agcaagagta gcagacatgt tataaaagac tgtgcaaaat caccctcgtt
     3361 ttacatttga ttcaaagaag aaggtaaaag ataagattat ttgcaactta aaaagtcaat
     3421 tagcttatcg gtatccatac a
//
LOCUS       DALPQQ010000173         3427 bp    DNA     linear   BCT 22-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus strain K18-6-464
            SAMD00233528-rid16434743.denovo.175, whole genome shotgun sequence.
ACCESSION   DALPQQ010000173 DALPQQ010000000
VERSION     DALPQQ010000173.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMD00233528
            Sequence Read Archive: DRR236061
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 3427)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3427)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001543423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001543423.1
            Genome Coverage       :: 77x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/22/2022 17:09:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,811
            CDSs (total)                      :: 2,743
            Genes (coding)                    :: 2,689
            CDSs (with protein)               :: 2,689
            Genes (RNA)                       :: 68
            rRNAs                             :: 2, 4, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 4, 2 (16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 54
            CDSs (without protein)            :: 54
            Pseudo Genes (ambiguous residues) :: 0 of 54
            Pseudo Genes (frameshifted)       :: 27 of 54
            Pseudo Genes (incomplete)         :: 27 of 54
            Pseudo Genes (internal stop)      :: 10 of 54
            Pseudo Genes (multiple problems)  :: 10 of 54
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3427
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMD00233528-rid16434743.denovo.175"
                     /strain="K18-6-464"
                     /db_xref="taxon:1280"
                     /geo_loc_name="Japan: Niigata"
     gene            103..2625
                     /gene="mprF"
                     /locus_tag="O7798_002471"
     CDS             103..2625
                     /gene="mprF"
                     /locus_tag="O7798_002471"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499886.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional lysylphosphatidylglycerol
                     flippase/synthetase MprF"
                     /protein_id="HDC2864664.1"
                     /translation="MNQEVKNKIFSILKITFATALFIFVAITLYRELSGINFKDTLVE
                     FSKINRMSLVLLFIGGGASLVILSMYDVILSRALKMDISLGKVLRVSYIINALNAIVG
                     FGGFIGAGVRAMVYKNYTHDKKKLVHFISLILISMLTGLSLLSLLIVFHVFDASLILD
                     KITWVRWVLYVVSFFLPLFIIYSMVRPPDKNNRFVGLYCTLVSCVEWLAAAVVLYFCG
                     VIVDAHVSFMSFIAIFIIAALSGLVSFIPGGFGAFDLVVLLGFKTLGVPEEKVLLMLL
                     LYRFAYYFVPVIIALILSSFEFGTSAKKYIEGSKYFIPAKDVTSFLMSYQKDIIAKIP
                     SLSLAILVFFTSMIFFVNNLTIVYDALYDGNHLTYYILLAIHTSACLLLLLNVVGIYK
                     QSRRAIIFAMISILLITVATFFTYASYILITWLAIIFVLLIVAFRRARRLKRPVRMRN
                     IVAMLLFSLFILYVNHIFIAGTLYALDIYTIEMHTSVLRYYFWLTILIIAIIIGMIAW
                     LFDYQFSKVRISSKIEDCEEIINQYGGNYLSHLIYSGDKQFFTNENKTAFLMYRYKAS
                     SLVVLGDPLGDENAFDELLEAFYNYAEYLGYDVIFYQVTDQHMPLYHNFGNQFFKLGE
                     EAIIDLTQFSTSGKKRRGFRATLNKFDELNISFEIIEPPFSTEFINELQHVSDLWLDN
                     RQEMHFSVGEFNEEYLSKAPIGVMRNEENEVIAFCSLMPTYFNDAISVDLIRWLPELD
                     LPLMDGLYLHMLLWSKEQGYTKFNMGMATLSNVGQLHYSYLRERLAGRVFEHFNGLYR
                     FQGLRRYKSKYNPNWEPRFLVYRKDNSLWESLSKVMRVIRHK"
     gene            complement(2828..3337)
                     /gene="msrA"
                     /locus_tag="O7798_002472"
     CDS             complement(2828..3337)
                     /gene="msrA"
                     /locus_tag="O7798_002472"
                     /EC_number="1.8.4.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499887.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide-methionine (S)-S-oxide reductase MsrA"
                     /protein_id="HDC2864665.1"
                     /translation="MNINTAYFAGGCFWCMTKPFDTFDGIEKVTSGYMGGHIENPTYE
                     QVKSGTSGHLETVEIQYDVALFSYNKLLEIFFSVIDPLDTGGQYQDRGPQYQTAIFYT
                     NDHQKELAETYIEQLKNTINADKAIATKILPASQFYKAEDYHQDFYKKNPERYAEEQK
                     IRQEYKNKQ"
BASE COUNT         1043 a          470 c          593 g         1321 t
ORIGIN      
        1 acaaaagtgt tatataaatc aaaggtaaat gatatgctat ttttatggtt tatatgatat
       61 attttgattt ataacagaaa taattagaat tgatgtgaaa aaatgaatca ggaagttaaa
      121 aacaaaatat tttcaatctt aaaaattacg tttgctacag ctttatttat ttttgtagca
      181 atcacattgt atcgggagtt atctggtatt aactttaaag atacgttggt tgaatttagt
      241 aagattaacc gtatgtcctt agtgttacta tttattggtg gtggggcatc gcttgttatt
      301 ctatcaatgt atgatgtgat tttatctaga gctttaaaaa tggatatatc cttaggcaaa
      361 gttttaagag taagttatat catcaatgca ttgaatgcga ttgtaggttt cggtggcttt
      421 attggtgcag gcgttagagc aatggtttat aaaaactata cgcatgataa aaagaaatta
      481 gttcacttta tatccttaat acttatttca atgttgacag gtttaagctt attatcattg
      541 ctaattgtat tccatgtttt cgatgcatct ttaatcttag ataagattac atgggtaaga
      601 tgggtattat atgtagtgtc atttttctta ccattattca ttatttattc aatggttaga
      661 ccacccgata aaaacaatcg ttttgtagga ttgtactgca ctttagtgtc gtgtgttgaa
      721 tggttagcag ctgcagttgt attatatttc tgtggtgtaa ttgttgacgc tcatgtatca
      781 ttcatgtcct ttattgcaat atttatcatt gctgcattat caggtttagt cagctttatt
      841 cctggtggtt tcggcgcttt cgatttagtt gtattactag gatttaaaac tttaggtgtc
      901 cctgaggaaa aagtattatt aatgctactt ctatatcgtt ttgcgtacta ttttgtaccg
      961 gtaattattg cattaatttt atcatcattt gaatttggta catcagctaa gaagtacatt
     1021 gagggatcta aatactttat tcctgctaaa gatgttacgt catttttaat gtcttatcaa
     1081 aaggatatta ttgctaaaat tccatcatta tcattagcaa ttttagtatt ctttacaagt
     1141 atgatctttt ttgtaaataa cttaacgatt gtttacgatg ctttatatga tggaaatcac
     1201 ttaacgtatt atattctatt ggcaattcat actagtgctt gtttattact tttactgaat
     1261 gtagttggta tttataagca aagtagacgt gccattatct ttgctatgat ttcaatttta
     1321 ttaatcacag tggcgacatt cttcacttac gcttcatata ttttaataac atggttagct
     1381 attatttttg ttctgcttat tgtagctttc cgtagagcac gtaggttgaa acgcccagta
     1441 agaatgagaa atatagttgc aatgctttta ttcagtttat ttattttata tgttaaccat
     1501 atatttattg ctggaacgtt atatgcatta gatatttata cgattgaaat gcatacatct
     1561 gtattgcgct attacttctg gcttacgatt ttaatcatcg ctatcatcat aggtatgatt
     1621 gcatggttgt ttgattatca atttagcaaa gtacgtattt cttctaaaat tgaagattgc
     1681 gaggagatta ttaatcagta cggcggtaat tatttgagtc acttgatata tagtggtgac
     1741 aagcagtttt tcactaatga aaataaaaca gcatttttaa tgtatcgtta taaagcaagt
     1801 tcattagtgg ttcttggaga tccgttaggt gatgaaaatg cctttgatga attgttagaa
     1861 gcattctata attacgctga gtatttaggc tatgatgtta tattctatca agttacagat
     1921 caacacatgc ctttatatca taatttcggt aaccaatttt tcaaattagg tgaagaagca
     1981 attattgatt taacgcaatt ttcaacttca ggtaaaaaac gccgtggatt tagagcgact
     2041 ttaaataaat tcgatgaact taatatttcg ttcgaaatta ttgaaccacc gttttcaact
     2101 gaatttataa atgaacttca acatgtaagt gatttatggc tagataatcg tcaggaaatg
     2161 catttctctg ttggtgaatt taatgaagaa tacttatcta aagcgccaat tggtgtaatg
     2221 cgaaatgaag aaaatgaagt aattgcattt tgtagtttaa tgccaacata ctttaatgat
     2281 gccatttcag tcgatttaat tagatggttg ccagagttag atttaccatt aatggatggt
     2341 ctatacttgc atatgttact ttggagtaaa gaacaaggtt atacaaaatt taatatgggt
     2401 atggcaacgt tatcgaacgt tggtcaattg cattattcat atttaagaga acgacttgca
     2461 ggccgtgtct ttgaacattt caacggtcta tatcgtttcc aaggattacg tcgttataaa
     2521 tctaaatata atccgaattg ggaaccacgc tttttagttt atcgtaaaga taattcgctt
     2581 tgggaatcac tttctaaagt aatgcgtgta atacgtcaca aataattaaa atccaagtgc
     2641 taagaggtat acagttatgc ctgatgcgct tggatttttt ggtttctata aagaatgatt
     2701 tataaaaaac ggtacagata agaatattta agtttcctat ctgtaccgta ttttaatatt
     2761 gaaatgagct aaagttaagt cgcctaactt ttattatcag tccaatcagt ttcatcaagt
     2821 ataaatgtta ttgcttattt ttgtattctt ggcgtatttt ttgttcttct gcatagcgct
     2881 ctggattttt cttataaaaa tcttggtgat agtcttcggc tttgtaaaat tgtgacgctg
     2941 gtaatatttt tgttgcaatt gccttatcag cattaatcgt atttttaagc tgctcgatat
     3001 aagtctcagc gagttctttt tgatgatcat tagtgtagaa aatagctgtt tgatattgag
     3061 gaccacggtc ttgatattga ccacctgtat ctaatgggtc aatgactgag aaaaatattt
     3121 ctaataactt attgtatgag aataatgcaa catcatattg aatttcaaca gtttctaaat
     3181 gaccactcgt acctgatttt acttgttcgt aagtaggatt ttcaatatgt ccgcccatat
     3241 atccagaagt tactttttct atgccgtcaa aggtgtcaaa tggtttcgtc atacaccaaa
     3301 agcaacctcc ggcaaaataa gctgtattaa tattcatttt tgacatcctt tcattagacc
     3361 ttagtacgat ttattaagaa atcacttgct ttttgaattg tttttatata acgttaatat
     3421 gtgatta
//
LOCUS       DALPQQ010000174         3422 bp    DNA     linear   BCT 22-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus strain K18-6-464
            SAMD00233528-rid16434743.denovo.176, whole genome shotgun sequence.
ACCESSION   DALPQQ010000174 DALPQQ010000000
VERSION     DALPQQ010000174.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMD00233528
            Sequence Read Archive: DRR236061
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 3422)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3422)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001543423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001543423.1
            Genome Coverage       :: 77x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/22/2022 17:09:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,811
            CDSs (total)                      :: 2,743
            Genes (coding)                    :: 2,689
            CDSs (with protein)               :: 2,689
            Genes (RNA)                       :: 68
            rRNAs                             :: 2, 4, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 4, 2 (16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 54
            CDSs (without protein)            :: 54
            Pseudo Genes (ambiguous residues) :: 0 of 54
            Pseudo Genes (frameshifted)       :: 27 of 54
            Pseudo Genes (incomplete)         :: 27 of 54
            Pseudo Genes (internal stop)      :: 10 of 54
            Pseudo Genes (multiple problems)  :: 10 of 54
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3422
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMD00233528-rid16434743.denovo.176"
                     /strain="K18-6-464"
                     /db_xref="taxon:1280"
                     /geo_loc_name="Japan: Niigata"
     gene            295..2106
                     /locus_tag="O7798_002473"
     CDS             295..2106
                     /locus_tag="O7798_002473"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501338.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetyltransferase"
                     /protein_id="HDC2864666.1"
                     /translation="MDTKDFKRLEKMYSPRYLPGLDGLRAFAVIGIIIYHLNAQWLSG
                     GFLGVDTFFVISGYLITSLLISEYYRTQKIDLLEFWKRRLKRLIPAVLFLICVVLTFT
                     LIFKPELIIQMKRDAIAAIFYVSNWWYISQNVDYFNQFAIEPLKHLWSLAIEEQFYLL
                     FPLVITFLLHRFKPRNIIQTLFIVSLISLGLMIVIHFITGDNSRVYFGTDTRLQTLLL
                     GCILAFIWPPFALKKDISKKIVVSLDIIGISGFAVLMTLFFIVGDQDQWIYNGGFYII
                     SFATLFIIAIAVHPSSLFAKFLSMKPLLIIGKRSYSLYLWHYPIIVFVNSYYVQGQIP
                     VYVYIIEILLTALMAEISYRFIETPIRKKGFKAFAFLPKKKGQFARTVLVILLLVPSI
                     VVLSGQFDALGKQHEAEKKEKKTEFKTTKKKVVKKDKQEDKQTANSKEDIKKSSPLLI
                     GDSVMVDIGNVFTKKIPNAQIDGKVGRQLVDATPIVKSQYKDYAKKGQKVVVELGTNG
                     AFTKDQLNELLDSFGKADIYLVSIRVPRDYEGRINKLIYEAAEKRSNVHLVDWYKASA
                     GHPEYFAYDGIHLEYAGSKALTDLIVKTMETHATNKK"
     gene            2467..3234
                     /locus_tag="O7798_002474"
     CDS             2467..3234
                     /locus_tag="O7798_002474"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501337.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CHAP domain-containing protein"
                     /protein_id="HDC2864667.1"
                     /translation="MKKIVTATIATAGLATIAFAGHDAQAAEQNNNGYNSNDAQSYSY
                     TYTIDAQGNYHYTWTGNWNPSQLTQNNTYYYNNYNTYSYNNASYNNYYNHSYQYNNYT
                     NNSQTATNNYYTGGSGASYSTTSNNVHVTTTAAPSSNGRSISNGYASGSNLYTSGQCT
                     YYVFDRVGGKIGSTWGNASNWANAAASSGYTVNNTPKVGAIMQTTQGYYGHVAYVEGV
                     NSNGSVRVSEMNYGHGAGVVTSRTISANQAGSYNFIH"
BASE COUNT         1212 a          488 c          602 g         1120 t
ORIGIN      
        1 agatgcataa aatataaaac gaaccttttt tgtaaaaata taatgaaaat aacagttatt
       61 ttgctaaaaa ttcaagaatc tatgataatc tatgttatgt agtaaaatcg acaaatttat
      121 atgtggtttg cagtaatgaa atcaactgta ataattgttt tctacttaat aaaaaattta
      181 aaactatctt aattaagggt taaatcaatt aatgaaaatc agtgcaatat tttattttca
      241 aaaatattgt gatatgctac aaaatagaga aaaataaatg gggcgtttat taacatggat
      301 acaaaagact ttaaacgttt agaaaaaatg tattccccgc gatacttacc tggattagat
      361 ggattgaggg cattcgcagt tataggaatc attatttatc acttgaatgc acaatggtta
      421 agtgggggct ttttaggagt agatacattc ttcgttattt caggttattt aataacaagt
      481 ttgttgataa gtgagtatta tcggacgcaa aaaatcgatt tgctagagtt ttggaagcga
      541 cgattgaaac gactcattcc ggcagtgtta tttttaatct gtgtcgtgct tacgttcaca
      601 ctgatattta aaccggaatt gattatacaa atgaaacgag atgctattgc agctatattc
      661 tatgtttcaa actggtggta catttcacag aatgtagatt attttaacca atttgctatt
      721 gaaccactca aacatttatg gtctttagcc attgaagaac aattttactt gcttttccca
      781 ttggttatca cgttcttatt acatagattt aaaccgagaa atattattca aacgctattt
      841 attgtatcgt tgatttcttt aggacttatg atagtgattc atttcatcac tggagataat
      901 tcacgtgtgt attttgggac agatacacga ctgcaaactt tattgcttgg ttgtatatta
      961 gcatttattt ggcctccgtt tgctttgaaa aaagatattt ctaaaaagat tgtcgtatca
     1021 ttagatatta tagggatatc tggttttgcg gttctaatga ctttgttctt tatagttgga
     1081 gaccaagatc aatggatcta taatggagga ttttacatta tatcatttgc aactttattc
     1141 attattgcaa ttgcggtaca tccttctagt ttatttgcta aatttttaag tatgaaacct
     1201 ttactaatta taggtaaacg atcatatagc ttatacttat ggcattatcc tatcattgtt
     1261 tttgtgaaca gttattacgt acaaggacaa ataccggtat acgtttatat tatagaaatt
     1321 ttgttaacag cgttaatggc tgaaatttcg tatcgcttta ttgaaacacc tatacgtaaa
     1381 aaaggattta aagcttttgc atttttacct aaaaagaagg ggcaatttgc tagaacagtg
     1441 ttagttatcc tattattggt tccgtctatc gttgtgctca gtggacagtt tgatgcactt
     1501 ggcaaacaac atgaagccga gaagaaagag aagaagacgg aatttaaaac aacgaagaaa
     1561 aaagtcgtta aaaaagataa gcaagaggat aagcagacag cgaatagcaa agaggatatt
     1621 aaaaagtcat caccactatt aattggtgac tcggtcatgg tggatattgg taatgtcttt
     1681 actaagaaaa taccaaatgc acaaattgat ggtaaagttg gacggcaact cgttgatgct
     1741 acaccaattg tgaaatcgca atataaagac tatgctaaaa aaggtcaaaa agttgtagta
     1801 gagcttggta caaatggggc atttacgaaa gatcaattaa atgaactatt ggatagtttt
     1861 ggaaaagcag acatatattt agtttctatt agagtaccta gagattatga aggtagaata
     1921 aataaattaa tttatgaggc agctgaaaag cgctctaatg tacatctagt cgattggtat
     1981 aaagcttctg caggtcatcc ggaatacttt gcatatgacg gtattcactt agaatatgca
     2041 ggtagtaaag cgctgactga tttgattgta aaaacgatgg aaacacatgc tacaaataag
     2101 aaataatttg atgcactaaa cttttgaaat attacattac ttctgatatt tattatcaaa
     2161 aatgatgtat ttcattaaaa gtttagtgct tttttatttt caaatcccat agtaacggtg
     2221 cagaaaaagt gttgtaaaca ttctaattgg tatattacat tcaatgaagc tttattagga
     2281 acagattaca ttatgataac aaagcccgca agacacctaa tctctgttat agtttgtttt
     2341 gtcgcaaaac tataaaagtt ataattgttt gcatactaaa aaaataaaaa atataaaatt
     2401 taaaataatt gagtcgctaa tgactatatg tatagagtgt tttgattatt gggaggatat
     2461 ttaattatga aaaaaatcgt tacagctaca atcgctacag caggacttgc cactatcgca
     2521 tttgcaggac atgatgcaca agccgcagaa caaaataaca atggatataa ttctaatgac
     2581 gctcaatcat acagctatac gtatacaatt gatgcacaag gtaattatca ttacacttgg
     2641 acaggaaatt ggaatccaag tcaattaacg caaaacaaca catactacta caacaactac
     2701 aatacttata gttataacaa tgcatcttac aataactact ataatcattc atatcaatac
     2761 aataactata caaacaatag tcaaacagca acaaataact attatactgg tggttcaggt
     2821 gcaagttata gcacaacaag taataatgtt catgtgacta caactgcagc gccatcttca
     2881 aatggtcgtt caatttctaa tggttatgca tcaggaagta acttatatac ttcaggacaa
     2941 tgtacttatt atgtatttga tcgtgttggt gggaaaattg gttcaacatg gggtaacgca
     3001 agtaattggg ctaacgcagc tgcatcatct ggctatacag tgaacaatac accaaaagtt
     3061 ggtgctatca tgcaaacaac acaaggctat tacggtcatg ttgcttacgt tgaaggcgtt
     3121 aacagcaacg gttctgttcg tgtttcagaa atgaactatg gacatggtgc tggtgtggtt
     3181 acgtctcgta caatttcagc aaaccaagca ggttcatata atttcattca ttaatcaaat
     3241 gtaaatcaaa tgacgtcaat attctctaac atgagagtat tggcgttttt gttttatata
     3301 aatataaatg agagcggttt attcactgat ctttagggaa ctaagtaata aagtgataat
     3361 ttatactatg tcagtatgat tgagagtgat tcaatttaga tgaaaaccat gaaaaaatat
     3421 at
//
LOCUS       DALPQQ010000175         3406 bp    DNA     linear   BCT 22-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus strain K18-6-464
            SAMD00233528-rid16434743.denovo.177, whole genome shotgun sequence.
ACCESSION   DALPQQ010000175 DALPQQ010000000
VERSION     DALPQQ010000175.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMD00233528
            Sequence Read Archive: DRR236061
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 3406)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3406)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001543423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001543423.1
            Genome Coverage       :: 77x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/22/2022 17:09:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,811
            CDSs (total)                      :: 2,743
            Genes (coding)                    :: 2,689
            CDSs (with protein)               :: 2,689
            Genes (RNA)                       :: 68
            rRNAs                             :: 2, 4, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 4, 2 (16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 54
            CDSs (without protein)            :: 54
            Pseudo Genes (ambiguous residues) :: 0 of 54
            Pseudo Genes (frameshifted)       :: 27 of 54
            Pseudo Genes (incomplete)         :: 27 of 54
            Pseudo Genes (internal stop)      :: 10 of 54
            Pseudo Genes (multiple problems)  :: 10 of 54
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3406
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMD00233528-rid16434743.denovo.177"
                     /strain="K18-6-464"
                     /db_xref="taxon:1280"
                     /geo_loc_name="Japan: Niigata"
     gene            complement(<1..84)
                     /locus_tag="O7798_002475"
     CDS             complement(<1..84)
                     /locus_tag="O7798_002475"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_047335196.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Csa1 family protein"
                     /protein_id="HDC2864668.1"
                     /translation="MGYLKRFALYISVMILIFAIAGCGKGNE"
     gene            452..760
                     /gene="spn"
                     /locus_tag="O7798_002476"
     CDS             452..760
                     /gene="spn"
                     /locus_tag="O7798_002476"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498988.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="myeloperoxidase inhibitor SPIN"
                     /protein_id="HDC2864669.1"
                     /translation="MKFKKVLVATAMVGVLATGVVGYGNQADAKVYSQNGLVLHDDAN
                     FLEHELSYIDVLLDKNADQATKDNLRSYFADKGLHSIKDIINKAKQDGFDVSKYEHVK
                     "
     gene            complement(864..2372)
                     /locus_tag="O7798_002477"
     CDS             complement(864..2372)
                     /locus_tag="O7798_002477"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498987.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FKLRK protein"
                     /protein_id="HDC2864670.1"
                     /translation="MRENFKLRKMKVGLVSVAITMLYIMTNGQAEASENQNALISNIN
                     VDNQEKQNNVNQAVQPQNNTNETSKVPANFVKLNDIKPGDTSIQGTTLPNQFILLTID
                     KKDVSSVEDSDSSFVMSDKDGNFKYDLNGRKIVHNQEIEVSSSDPYLGDDEEDEEVEE
                     TSTEEVGAEEESTEAKATYTTPRYEKAYEIPKEQLKEKDGHHQVFIEPITEGSGIIKG
                     HTSVKGKVALSINNKFINFETNANGGPNKEEAKSGSEGIWMPIDDKGYFNFDFKTKRF
                     DDLELKKNDEISLTFAPDDEDEALKSLIFKTKVTSLEDIDKAETKYDHTKVEKVKVLK
                     DVKEDLHVDEIYGSLYHTEKGKGILDKEGTKVIKGKTKFANAVVKVDSELGEGQEFPD
                     LQVDEKGEFSFDVDHAGFRLQNGETLNFTVVDPITGELLSGNFVSKNIDIYESPEEKA
                     DREFDERMENTPAYHKLHGDKIVGYDTNGFPITWFYPLGEKKVERKAPKLEK"
     gene            complement(2394..3071)
                     /locus_tag="O7798_002478"
     CDS             complement(2394..3071)
                     /locus_tag="O7798_002478"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498986.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="superantigen-like protein SSL11"
                     /protein_id="HDC2864671.1"
                     /translation="MKLKNIAKASLALGILTTGMITTTAQPVKASTLEVRSQATQDLS
                     EYYNRPFFEYTNQSGYKEEGKVTFTPNYQLIDVTLTGNEKQNFGEDISNVDIFVVREN
                     SDRSGNTASIGGITKTNGSNYIDKVKDVNLIITKNIDSVTSTSTSSTYTINKEEISLK
                     ELDFKLRKHLIDKHNLYKTEPKDSKIRITMKDGGFYTFELNKKLQTHRMGDVIDGRNI
                     EKIEVNL"
BASE COUNT         1041 a          599 c          413 g         1353 t
ORIGIN      
        1 ttcattacct ttgccacaac ctgctatcgc aaatattaaa atcataacgc ttatgtacaa
       61 tgcaaacctt tttaaatatc ccatcgcttc acgtctctct gttttatact tcatttatat
      121 tctcttttca tataaataat taattatttt gtatatttct cttttacgtt accaaaatat
      181 acatatacaa tcaatttaat ttcttaatta aatttgtact tattattata ttgcgtcatt
      241 tttttattat tgtttcattt gatttaaacc ctttttgaaa tcaaggtttt attaggaaaa
      301 accctcaagc atcgtattaa agattaattg catttaaaca atatttgtca ctttaactat
      361 ttattaaaaa ttattaaatc gacttaataa acgtaatttt cttaatattc agtgttatga
      421 tggagttaca atttttagag gagtgataga tatgaaattt aaaaaggttt tagtagctac
      481 ggcaatggta ggtgttttag caactggcgt tgttggatat ggtaatcaag cagatgcgaa
      541 agtttattct caaaatggac tcgtactaca tgatgatgca aacttcttag aacatgaatt
      601 aagttatatt gatgtgttat tagataagaa tgctgaccaa gctacaaaag acaacttaag
      661 atcatacttc gccgataaag gactacattc aatcaaagac attatcaaca aagctaaaca
      721 agacggcttt gatgtttcaa aatatgaaca cgtaaaataa attcaataat gctttgtaac
      781 aaagcacaaa aaaacagctc aatgacgtag aagtcagtga ttaactcact aatttcatta
      841 catcattaag ctgttttatt taattatttt tctaattttg gtgccttacg ttcaactttc
      901 ttttcaccta atggataaaa ccaggtaatc gggaatccgt tagtatcgta gccgacaatt
      961 ttatcaccat gtaatttatg atatgcaggt gtgttttcca ttctttcatc aaactcacga
     1021 tctgcttttt cttcaggaga ttcataaata tctatgtttt tagaaacaaa atttccactt
     1081 aataattcac ctgtaatagg atcaactact gtgaagttta gtgtttctcc attttgtaat
     1141 ctaaatccag catgatctac atcaaagctg aattcacctt tttcatcgac ttgcaaatca
     1201 gggaattctt gaccttcacc tagttcagag tctaccttca caactgcatt tgcgaattta
     1261 gtcttacctt taattacttt agtaccttct ttatcaagaa tacctttacc tttttctgta
     1321 tgatataagc ttccgtaaat ttcatctaca tgtaaatctt ctttaacatc tttcaatact
     1381 tttacttttt ccactttagt atggtcatat ttagtttctg ctttatcaat atcttctaaa
     1441 ctcgttacct tagttttgaa aattaatgac ttcaatgcct catcttcgtc atcaggtgca
     1501 aatgttaatg agatctcatc atttttcttt aactctaaat catcgaaacg tttcgttttg
     1561 aagtcaaaat taaagtatcc tttgtcatca ataggcatcc agattccttc tgatccagat
     1621 ttcgcttctt ctttatttgg accaccatta gcatttgtct caaagttaat aaatttatta
     1681 ttaatagata gagcaacttt accttttaca gaggtatggc ctttaataat acctgaacct
     1741 tcagtaatag gttcgataaa aacttggtga tgtccatctt tttcttttag ctgttctttc
     1801 ggtatttcat acgctttttc atatcgcggt gttgtatatg tagctttagc ttctgtactt
     1861 tcttcctcag caccaacttc ttcagttgaa gtttcttcta cttcttcatc ttcttcatcg
     1921 tcacctaaat agggatctga tgaagacact tcaatttctt gattatgaac aattttgcga
     1981 ccatttaagt catacttaaa attcccatct ttatcagaca taacaaagct gctgtcagaa
     2041 tcttcaactg agctcacatc ttttttatca atagttaata gtataaattg atttggtaaa
     2101 gttgttcctt gtatagaagt atcacctggt ttaatatcat tcaatttgac aaaattagcc
     2161 ggtacttttg atgtttcatt agtattattt tgaggctgaa cagcttgatt tacattattc
     2221 tgtttttcct gattgtctac atttatatta gagattaaag cgttttgatt ttcagatgct
     2281 tctgcttgtc cgtttgtcat aatatataac attgtaattg caacagatac taaaccgact
     2341 ttcattttac gtaacttaaa attttccctc atgatatgct ccctcgaata attttataaa
     2401 ttcacttcaa ttttttctat atttctgcca tcaataacat cacccatacg gtgtgtttgt
     2461 aactttttat tcaattcaaa tgtgtagaac ccaccatctt tcatagtaat tcgaatttta
     2521 ctgtctttag gttctgtctt ataaaggtta tgtttatcaa ttaaatgctt tcttaattta
     2581 aaatcaagtt cttttaatga aatttcttct ttattaattg tatatgtaga tgatgttgac
     2641 gttgatgtaa cactatcgat gtttttagta attattaaat ttacatcttt tactttatca
     2701 atataatttg aaccgtttgt tttagtaata ccaccaattg aagctgtatt accagatcta
     2761 tcagaatttt ctcttacaac aaatatatct acattagaaa tatcttcacc aaaattttgc
     2821 ttttcattcc cagttaaagt tacatctata agttgataat taggagtaaa cgtcactttt
     2881 ccttcctctt tatatcctga ctgatttgta tactcaaaga acggtctatt ataatattca
     2941 ctcaagtctt gagtagcttg tgatctaacc tctaatgtac ttgcttttac tggctgagca
     3001 gtagttgtaa tcatccctgt tgttaaaatc cctagtgcta aacttgcttt agcaatattt
     3061 tttaatttca taattctatg ctcccaattt ttagtctatt tgatttattc tattacgcaa
     3121 tacgaacaat cctcattcat tataatgagc aatggtcgtg cttcacatta aacttacttt
     3181 aactaaaaat taatcattat taagtaattt aataaatagt taactaatat cattcaattc
     3241 ctatcgatct actctctttt atttacgaat aacactttat ctcaacttaa tctttattta
     3301 actacttatt ctgtacacaa tttcgacaca aaaaagacac tgcgctttca cagtgcctaa
     3361 atttaatgtt cgtttttaat tcactttact tttacaactt ttatgt
//
LOCUS       DALPQQ010000176         3371 bp    DNA     linear   BCT 22-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus strain K18-6-464
            SAMD00233528-rid16434743.denovo.178, whole genome shotgun sequence.
ACCESSION   DALPQQ010000176 DALPQQ010000000
VERSION     DALPQQ010000176.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMD00233528
            Sequence Read Archive: DRR236061
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 3371)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3371)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001543423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001543423.1
            Genome Coverage       :: 77x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/22/2022 17:09:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,811
            CDSs (total)                      :: 2,743
            Genes (coding)                    :: 2,689
            CDSs (with protein)               :: 2,689
            Genes (RNA)                       :: 68
            rRNAs                             :: 2, 4, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 4, 2 (16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 54
            CDSs (without protein)            :: 54
            Pseudo Genes (ambiguous residues) :: 0 of 54
            Pseudo Genes (frameshifted)       :: 27 of 54
            Pseudo Genes (incomplete)         :: 27 of 54
            Pseudo Genes (internal stop)      :: 10 of 54
            Pseudo Genes (multiple problems)  :: 10 of 54
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3371
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMD00233528-rid16434743.denovo.178"
                     /strain="K18-6-464"
                     /db_xref="taxon:1280"
                     /geo_loc_name="Japan: Niigata"
     gene            <1..276
                     /locus_tag="O7798_002479"
     CDS             <1..276
                     /locus_tag="O7798_002479"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001036448.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1433 domain-containing protein"
                     /protein_id="HDC2864672.1"
                     /translation="QKERITIYMKYNVKGYKNISFANFKENPMDGYSISGYINNDKKL
                     SFTAGIRSVDDFQFDTDISYTDELGRKFNKNPKSVSEIKKEQNTSNK"
     gene            470..646
                     /locus_tag="O7798_002480"
                     /pseudo
     CDS             470..646
                     /locus_tag="O7798_002480"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001066885.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
     gene            complement(624..725)
                     /locus_tag="O7798_002481"
     CDS             complement(624..725)
                     /locus_tag="O7798_002481"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500430.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDC2864673.1"
                     /translation="MQGFKEKHQELKKALCQIGLMRSISEVKQLNIA"
     gene            complement(848..943)
                     /gene="pepA1"
                     /locus_tag="O7798_002482"
     CDS             complement(848..943)
                     /gene="pepA1"
                     /locus_tag="O7798_002482"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001801861.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I toxin-antitoxin system Fst family toxin
                     PepA1"
                     /protein_id="HDC2864674.1"
                     /translation="MMLIFVHIIAPVISGCAIAFFSYWLSRRNTK"
     gene            1146..1289
                     /locus_tag="O7798_002483"
     CDS             1146..1289
                     /locus_tag="O7798_002483"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000251965.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HDC2864675.1"
                     /translation="MTRERRSFSSEFKLQMVRLYKNGKPRNEIIREYDFTPSTFVNGG
                     YKM"
     gene            1893..2276
                     /locus_tag="O7798_002484"
     CDS             1893..2276
                     /locus_tag="O7798_002484"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500427.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDC2864676.1"
                     /translation="MSNQNLFDELEKKGYKLEDIFTKEEIKKYKAEDQLRAGKTQYVE
                     TGKDTATLYLSSAYTKTIAALGAGAISVISALTGGLVGAGVGGFLGSIAASNIDTSKG
                     IYIKLKTKKNAAGEYVLTGEKWGYQ"
     gene            2287..2463
                     /locus_tag="O7798_002485"
     CDS             2287..2463
                     /locus_tag="O7798_002485"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500426.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDC2864677.1"
                     /translation="MDRLKYSLKVGILALLLFCTLNYLVPMQSNAFSIIIYSAIFAVL
                     LMLLVYIFLGILKK"
     gene            2465..2650
                     /locus_tag="O7798_002486"
     CDS             2465..2650
                     /locus_tag="O7798_002486"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDC2864678.1"
                     /translation="MKQISIGYEEIYGDRIFHSHFLKEHEVKNWKTVNQIIEKEHLDK
                     NEYEAEPPLFFFSGSLD"
     gene            2764..>3371
                     /locus_tag="O7798_002487"
     CDS             2764..>3371
                     /locus_tag="O7798_002487"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500424.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ImmA/IrrE family metallo-endopeptidase"
                     /protein_id="HDC2864679.1"
                     /translation="MFTPIVINLLNDVGSIFLVRVGNQLKVIEKVHYEDILESKIVRL
                     FQAFIKDKMDQLFITSEHFAIDIDKLLFQLNLNVRYIKMEGNTSGYLSGRTIYINNNH
                     SINNTRFSIARELGRYLFKNTDLMRDSNDNSLKNLHEMIYESDVNQFSVDLLMPKKQI
                     EALVYNFYEVNNINLSSGLSEKERNKLLNLISTKLEVSKVAAG"
BASE COUNT         1287 a          416 c          569 g         1099 t
ORIGIN      
        1 caaaaagaaa gaataacgat ttatatgaag tacaatgtga aaggttataa aaatataagc
       61 ttcgctaatt ttaaagaaaa cccaatggat ggttattcta ttagtggtta tataaataat
      121 gataaaaagt tatcatttac agctggtata agatctgttg atgattttca atttgatacc
      181 gatatttctt atacagatga attgggtaga aaatttaata aaaatcctaa gtcagtttct
      241 gaaataaaaa aagagcaaaa tacgtccaat aaataattgt tcatattgtg atgaaacaaa
      301 aatataagtc attagatgag tttaactatg ttataaatat ttgtagtatc tataaaaatc
      361 tcgacactat taaaatgata aagtgccgag gttttcttac ttatttagtt aattcaaagt
      421 ttatgccaga ttcataagaa tttgtgacac ttttaatagt gtaaccattg attattacaa
      481 tttatcaaat ggtcctttag aaggtataaa taacaaaata aaattaatta aacgtacatc
      541 ttttggttat ggaagttaca atcatttgcg caatcgaata ttattatgtt caaaacttta
      601 cgctccaaaa agtaaaaagg aagttaagca atgtttagtt gcttaacttc ggatattgaa
      661 cgcatcagtc caatttgaca tagagccttt tttagttctt gatgtttctc tttaaaacct
      721 tgcatatttt acaaaaagaa aaattagcag tataattaag acaacgaaaa taagtattta
      781 cttatacacc aatcccctca ctatttgcgg tagtgagggg atttttattg gtgcggctat
      841 atgtcaccta ttttgtattg cgtctactta gccaataaga aaaaaacgca atggcacagc
      901 cactgatgac tggtgctatg atgtgaacga aaataagcat caccttatac acctcctctc
      961 tgcgtctaaa ttgacgcctg agagataggc gactctacta ttatatcatc ggcaaatata
     1021 caagcacagt cacttgcttc tgataagtta tatgattcta gctgatagat tgaatcgtct
     1081 acacttaatt ggacaaattc tatgagaata gatattgtta atttaagaaa gtaggcgatt
     1141 ttattatgac aagagaaaga agatcattta gttcagagtt taagttacaa atggttagat
     1201 tatataaaaa tggtaagcct aggaatgaaa ttatacgcga gtatgatttc acaccttcga
     1261 cgtttgtaaa tggcggttat aaaatgtagg aaaatggata aagcaacatc aaaacacggg
     1321 tacattcaat caccaagata acttatcgga tgaagaaaaa gagctgatta aattacgcaa
     1381 agaagttcaa catttaaaaa tggagaacga tattttaaag caagtagcgc tgattatggg
     1441 gcaaaaatag aagtcattca aaagaatgca catcaatatt cagtatcagc aatgtgtaaa
     1501 gtcctgataa tactaagaag tacctattat gattctataa aaagaaaaga taataaaatc
     1561 actaaagatg attcaaacat agaacatgcc gtcataaata tttttaattc taatagaaaa
     1621 gtctttggta caagacgaat taaaaatcat ttaaatgaca agggtctcac tgtatctgga
     1681 caaaagatag gtcgatcatg aaaaaatcta gtttctgttt atacgaaatc taaatacaaa
     1741 aatcatctaa aagaaactaa tgaaaaacga attaaaaatc tttattatta gctgctggtg
     1801 tattatttgt tagtccaatt tcattatctt ataattcaga tgtagctcat gctgaagata
     1861 agttagacca ttctcaagca aaggtaatat atttgagtaa ccaaaattta tttgatgaac
     1921 ttgagaaaaa aggttataaa ctggaagata tatttacaaa agaagaaata aaaaaatata
     1981 aagctgaaga ccaattgaga gcgggtaaaa ctcaatatgt agaaacaggt aaagatactg
     2041 caacattata tctttcttct gcatatacaa aaacaatagc tgctttaggt gcgggggcta
     2101 ttagcgttat ttctgcacta acaggaggtt tagttggcgc aggtgttggt ggtttccttg
     2161 gatctatagc tgcatcgaat attgatacta gtaagggaat atatataaaa ttaaaaacta
     2221 aaaagaatgc agccggggaa tacgttctga caggagaaaa atggggatat cagtaagggt
     2281 gattttatgg atagattaaa atattcactt aaagttggaa ttttagcatt attattattt
     2341 tgtactttaa attatttagt tccaatgcaa agcaatgctt tttcaataat tatatattcg
     2401 gcaatttttg ctgtgttact tatgctttta gtttatatat ttttaggaat tttaaagaaa
     2461 tgacatgaaa caaattagca ttggctatga agaaatctat ggggatagaa tttttcatag
     2521 ccatttttta aaagagcatg aagtaaaaaa ttggaaaacc gtcaatcaaa taattgaaaa
     2581 agaacacttg gacaaaaatg aatatgaagc ggaaccgccg ttatttttct tttcaggatc
     2641 gttagattag attcggttgt atagtataat gaaaaatatt ataataaatt tataaaaaag
     2701 gtattttatt ttgaaatcat gtcccttcgt tacatatagt agtagagggg ttttatttta
     2761 ataatgttta cacctatagt tataaattta ttaaatgatg taggttcgat ttttttagtt
     2821 agggtgggga atcaattgaa agttattgag aaagttcatt atgaagatat tttagaatca
     2881 aaaatagttc gattatttca ggcatttata aaggacaaaa tggatcaact ttttattact
     2941 tctgaacact ttgctattga catagacaag ctattatttc aacttaattt aaatgttaga
     3001 tatattaaaa tggagggtaa tacttcgggt tatttaagtg gaagaacaat ctatattaat
     3061 aataatcact cgattaataa tacaagattt tcaatagctc gtgaattggg ccgttattta
     3121 tttaaaaata cagacttaat gagagatagt aacgataata gtctaaagaa tttacatgaa
     3181 atgatttatg aaagcgacgt aaatcagttt tcagtcgact tacttatgcc taaaaagcaa
     3241 atagaggcat tagtctataa tttttatgaa gtcaataata tcaatttaag ttctggttta
     3301 tctgaaaagg aacgaaacaa actattgaac cttatatcaa ctaagttgga agtttcgaaa
     3361 gtagctgctg g
//
LOCUS       DALPQQ010000177         3164 bp    DNA     linear   BCT 22-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus strain K18-6-464
            SAMD00233528-rid16434743.denovo.179, whole genome shotgun sequence.
ACCESSION   DALPQQ010000177 DALPQQ010000000
VERSION     DALPQQ010000177.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMD00233528
            Sequence Read Archive: DRR236061
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 3164)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3164)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001543423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001543423.1
            Genome Coverage       :: 77x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/22/2022 17:09:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,811
            CDSs (total)                      :: 2,743
            Genes (coding)                    :: 2,689
            CDSs (with protein)               :: 2,689
            Genes (RNA)                       :: 68
            rRNAs                             :: 2, 4, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 4, 2 (16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 54
            CDSs (without protein)            :: 54
            Pseudo Genes (ambiguous residues) :: 0 of 54
            Pseudo Genes (frameshifted)       :: 27 of 54
            Pseudo Genes (incomplete)         :: 27 of 54
            Pseudo Genes (internal stop)      :: 10 of 54
            Pseudo Genes (multiple problems)  :: 10 of 54
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3164
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMD00233528-rid16434743.denovo.179"
                     /strain="K18-6-464"
                     /db_xref="taxon:1280"
                     /geo_loc_name="Japan: Niigata"
     gene            36..1598
                     /locus_tag="O7798_002488"
     CDS             36..1598
                     /locus_tag="O7798_002488"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500912.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BCCT family transporter"
                     /protein_id="HDC2864680.1"
                     /translation="MKNKSVSLVFWVSLVICTIFVAFGAIFPKQLEKLTQNITTFIAL
                     HFSWYYLLLVLVILFVCVYILFSRYANITLGEEGEDPEFSLPSWFAMLFSAGMGIGLV
                     FWTTAEPISHAFKLTPIHKAGTQSAINDAMQFSFFHWGIHAWAVYGIVALVFAYFSFH
                     KGYLGLVSATLTPLLGEKAMRGPLGGAIDVLAVIATVTGVAATLGFGALQINEGLHFL
                     FNVPSNFTMQVILIVIATILFTWSAWSGIDKGIKTLSNINMLLAFVVLIGLFIVGPTL
                     YILNTFTNGLGNYIANFFSMSLRIPTGGQKFQWLQNWTIFYWAWWISWAPFVGIFIAR
                     VSKGRTIKEFILGVLFVPALVCFIFFAVFGASAIYLQDNHIADIAKAATETATFATLQ
                     HYPLGFVLSLITLLVIMIFFVTSADSATYVLGMLSSSGDINPKSFVKVSWGIIMALFA
                     IIMIYTGGTQAIQNLLIIAALPFSVVIIAMIWSLIKSLSEEKPRNSNKVLIKHRDPDI
                     LEYRSSKHIDEN"
     gene            1773..2309
                     /gene="amaP"
                     /locus_tag="O7798_002489"
     CDS             1773..2309
                     /gene="amaP"
                     /locus_tag="O7798_002489"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500911.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alkaline shock response membrane anchor protein
                     AmaP"
                     /protein_id="HDC2864681.1"
                     /translation="MKRLKNFILGLLIVVIVGFLLFMYIQDGRITEYQDYFLQFEWFQ
                     PLLISLAALLILIGLILVFSIFKPTHRKPGLYKDFDDGHVYVSRKAVEKTAFDTVAKY
                     DQVRQPNVVAKLYNKKNKSYIDIKTDFFVPNNVQVQSLTEAIRSDIKKNVEYFTEMPV
                     RKLEVNVRDQKTSGPRVL"
     gene            2322..2561
                     /locus_tag="O7798_002490"
     CDS             2322..2561
                     /locus_tag="O7798_002490"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500910.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2273 domain-containing protein"
                     /protein_id="HDC2864682.1"
                     /translation="MANNHNQNGQDSTQQVINFLKVFKWRIVGFLAFLLIAILFLTLG
                     FWKTVLIIVLCLIGVGIGYMKDRKQDFMNFLNRWS"
     gene            2624..3133
                     /locus_tag="O7798_002491"
     CDS             2624..3133
                     /locus_tag="O7798_002491"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500909.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Asp23/Gls24 family envelope stress response
                     protein"
                     /protein_id="HDC2864683.1"
                     /translation="MTVDNNKAKQAYDNQTGVNEKEREERQKQQEQNQEPQFKNKLTF
                     SDEVVEKIAGIAAREVKGILDMKGGLTDTFTNAFSSGNNVTQGVSVEVGEKQAAVDLK
                     VILEYGESAPKIFRKVTELVKEQVKYITGLDVVEVNMQVDDVMTQKEWKQKHEKNNEN
                     NNQERQGLQ"
BASE COUNT         1057 a          455 c          594 g         1058 t
ORIGIN      
        1 atgaacttac cattacacag aaagggtttg tatttatgaa aaataaatca gtaagtctag
       61 tgttttgggt atctttagtg atatgtacga tatttgttgc ttttggagca atatttccga
      121 aacagttaga aaaactcacg caaaacatta ctacatttat tgcgctacat ttttcttggt
      181 attatttatt gctcgtttta gttattttat ttgtctgtgt gtatatttta ttttcgagat
      241 acgcaaacat tacattaggt gaagaaggcg aagatcctga attctcattg ccgtcttggt
      301 ttgctatgtt atttagtgct ggtatgggaa taggacttgt gttctggaca acggcagaac
      361 caatcagtca tgccttcaaa ttaacgccta ttcataaagc tggcacgcaa tctgcaatta
      421 atgatgcaat gcagttttca tttttccatt gggggattca tgcatgggca gtctatggta
      481 ttgtcgcgct agtgtttgca tattttagct ttcataaagg atatcttggc ttagtcagcg
      541 ctacattgac gcctttatta ggtgaaaagg caatgcgtgg acctttaggt ggtgccattg
      601 atgtattggc agtcatagct acagtaacag gcgttgctgc aacattaggt ttcggtgcat
      661 tgcaaataaa cgaaggttta cattttttat ttaatgtacc gagtaacttc acgatgcaag
      721 taatcttgat tgtcattgca accatattat ttacttggtc agcatggtca ggtatcgata
      781 aaggtatcaa aacgttgagt aatatcaaca tgttacttgc ttttgtagta cttattggtc
      841 tttttattgt tgggccaacg ctatacattt taaatacatt tacgaatggt ctaggtaatt
      901 atattgcaaa tttctttagt atgagtttac gcattccgac aggtggtcaa aaattccaat
      961 ggttacaaaa ttggacaatc ttttactggg catggtggat atcttgggca ccatttgtag
     1021 gtatatttat tgcacgtgtg tcaaaaggac gtacgattaa agaatttatt ctaggtgtac
     1081 tttttgtccc ggcgttagtt tgctttatat tctttgcggt attcggcgcg tcagcaattt
     1141 acttacaaga taatcatatt gccgatattg ctaaagctgc gacagaaaca gcaacttttg
     1201 cgacgctaca acattatccg ctaggttttg tattaagctt aattacttta cttgttatta
     1261 tgattttctt tgttacatca gcggattcgg caacttatgt tttaggtatg ttgagttcaa
     1321 gtggtgatat taatccgaag tcatttgtca aagtgagttg gggtatcatt atggcattat
     1381 ttgcaatcat catgatttac acaggtggta ctcaagcaat tcaaaattta ttaatcattg
     1441 ctgcgttacc attttccgtg gtcattatag cgatgatatg gtcgcttata aaatctttga
     1501 gtgaggagaa accgagaaat agtaataagg ttttaattaa acatcgtgac ccagatattt
     1561 tagaatatcg ttcttcaaaa catattgacg aaaattaatt aataatgagg ttttatttac
     1621 aaaaactagg gaatatatta ctaaatggta cttcatctta tatattaaaa ataaatttaa
     1681 agttattaat ttattatgtt taagaaaaaa actgatgggt acatatttaa tatgttttta
     1741 aattaacttt aactaaggag gtgtcgttag gggtgaaacg acttaaaaac tttatccttg
     1801 gcttattaat agtagtaatc gtggggttcc tgttattcat gtatatccaa gatggacgta
     1861 taactgaata tcaagactac ttccttcaat ttgaatggtt ccaaccatta cttatttcac
     1921 ttgctgcact attgatatta ataggtctta tattagtatt tagtatcttc aaacctacgc
     1981 atcgaaaacc tggattatac aaagacttcg atgatggtca tgtttacgta tctcgtaaag
     2041 ctgttgaaaa gacggcattc gatacggttg caaaatatga tcaagtaaga caaccaaatg
     2101 tagttgcgaa actatataac aaaaaaaata aatcttatat cgacattaaa actgactttt
     2161 tcgtaccaaa taatgttcaa gttcaatctt taactgaagc aattcgttcg gatattaaaa
     2221 agaatgtaga atatttcaca gaaatgccag tacgtaagtt agaagttaat gtgagagatc
     2281 agaaaacttc tggtccacga gtgttgtaag ggaggtatat catggctaac aatcataacc
     2341 aaaacggaca agactctaca caacaagtga ttaatttttt aaaagtattt aaatggagaa
     2401 tcgttggttt cctagcgttt ctattaatcg cgatattatt cttaacgtta ggtttttgga
     2461 aaacagtact tatcatcgtt ttatgtttaa ttggtgtagg tattgggtat atgaaagacc
     2521 gtaagcaaga ttttatgaat tttttaaatc gatggagtta attcatcaat ttagaattta
     2581 attaaaaaaa tataaaaatt aacaagtaaa aggagaatct attatgactg tagataacaa
     2641 taaagcaaaa caagcatacg acaatcaaac tggtgttaac gaaaaagaaa gagaagagcg
     2701 tcaaaaacaa caagaacaaa atcaggagcc tcaattcaaa aacaaattaa cattctctga
     2761 tgaagttgtt gaaaaaattg ctggtatcgc tgcacgtgaa gttaaaggta tcttagatat
     2821 gaaaggtggc ttaactgata cattcactaa tgcattctca agtggcaaca atgttactca
     2881 aggtgtatct gttgaagttg gtgaaaaaca agctgctgta gacttaaaag taatcttaga
     2941 atatggtgaa tcagcaccaa aaatcttccg taaagtaact gaattagtta aagaacaagt
     3001 taaatatatt actggtttag atgtagttga agttaacatg caagttgacg atgtaatgac
     3061 tcaaaaagag tggaaacaaa aacacgaaaa aaataacgaa aacaataacc aagaaagaca
     3121 aggtttacaa taagttattc gataaaaagg gcttgggaca ttaa
//
LOCUS       DALPQQ010000178         3162 bp    DNA     linear   BCT 22-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus strain K18-6-464
            SAMD00233528-rid16434743.denovo.180, whole genome shotgun sequence.
ACCESSION   DALPQQ010000178 DALPQQ010000000
VERSION     DALPQQ010000178.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMD00233528
            Sequence Read Archive: DRR236061
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 3162)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3162)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001543423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001543423.1
            Genome Coverage       :: 77x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/22/2022 17:09:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,811
            CDSs (total)                      :: 2,743
            Genes (coding)                    :: 2,689
            CDSs (with protein)               :: 2,689
            Genes (RNA)                       :: 68
            rRNAs                             :: 2, 4, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 4, 2 (16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 54
            CDSs (without protein)            :: 54
            Pseudo Genes (ambiguous residues) :: 0 of 54
            Pseudo Genes (frameshifted)       :: 27 of 54
            Pseudo Genes (incomplete)         :: 27 of 54
            Pseudo Genes (internal stop)      :: 10 of 54
            Pseudo Genes (multiple problems)  :: 10 of 54
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3162
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMD00233528-rid16434743.denovo.180"
                     /strain="K18-6-464"
                     /db_xref="taxon:1280"
                     /geo_loc_name="Japan: Niigata"
     gene            complement(87..1223)
                     /locus_tag="O7798_002492"
     CDS             complement(87..1223)
                     /locus_tag="O7798_002492"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499935.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="toxic anion resistance protein"
                     /protein_id="HDC2864684.1"
                     /translation="MTENKSFKESHPLDDFISDKELSNTTIQKEKLTIEQQKQVDTIS
                     KQINPLDNEGLLAFGSDLQKQISQFSHQMLDEVQSKDVGPIGDTLSDLMSKLKSVNPN
                     ELNTDKPSMLKRIFSRAKSSINEIFSRMQSVSAQVDRITIQLQKHQTHLTRDIELLDT
                     LYDKNKQYFDDLSLHIIAAQQKKLQLENEKLPQLQQQAQQSTNQMDIQQVADMQQFID
                     RLDKRIYDLQLSRQIALQTAPQIRMIQNVNQALAEKIQSSILTSIPLWKNQMAIALTL
                     MRQRNAVAAQRAVTDTTNDLLTANAEMLKQNAIETATENERGIVDLDTLKRTQRNIIE
                     TIEETLIIQQHGREERQLAEKELQQLEQDLKSHLVNIKGPNKQS"
     gene            complement(1255..1884)
                     /locus_tag="O7798_002493"
     CDS             complement(1255..1884)
                     /locus_tag="O7798_002493"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499934.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5-bromo-4-chloroindolyl phosphate hydrolysis
                     family protein"
                     /protein_id="HDC2864685.1"
                     /translation="MTVRYNISHIFGVLVGIPVAFLTSIFGMIALDVSFLIDMSIGIV
                     GFLMTYLPIQKLTSRKYLNEIGLTRKDYRYIRNQLNHTHQKLRGILKTYVNIRSIKDF
                     RQINDIYQISRSIYTTVRQRPASFYKVEGFFYSHIDNALNLVDAYTRLAKMPKKSINE
                     QQKLEQTRITLDEVKRTLIADLKRLNEDDYERLDIEMELNKLHQKHHQD"
     gene            complement(1903..2172)
                     /locus_tag="O7798_002494"
     CDS             complement(1903..2172)
                     /locus_tag="O7798_002494"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499933.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acylphosphatase"
                     /protein_id="HDC2864686.1"
                     /translation="MRHIHLQVFGRVQGVGFRYFTQRIAMNYNIVGTVQNVDDYVEIY
                     AQGDDADIERFIQGVIEGASPASNVTSHQLEELELNQKLSDFRSI"
     gene            2335..2643
                     /locus_tag="O7798_002495"
     CDS             2335..2643
                     /locus_tag="O7798_002495"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499932.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1033 family protein"
                     /protein_id="HDC2864687.1"
                     /translation="MWTVTKIRADYEGWWLFSDWPENIVEKYQYQDFDDMFKHYQQLI
                     NQCKVQFDNYVTGKYNIYAFYNNCDMNYCEDCEEDLQIFYSFIVLQNNEVYYKLPIID
                     "
     gene            2814..3014
                     /gene="cspA"
                     /locus_tag="O7798_002496"
     CDS             2814..3014
                     /gene="cspA"
                     /locus_tag="O7798_002496"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015900294.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cold shock protein CspA"
                     /protein_id="HDC2864688.1"
                     /translation="MKQGTVKWFNAEKGFGFIEVEGENDVFVHFSAINQDGYKSLEEG
                     QAVEFEVVEGDRGPQAANVVKL"
BASE COUNT          974 a          480 c          503 g         1205 t
ORIGIN      
        1 taatagaaat cagctttttt acattgccta agaactttaa ggaacttaat gtcccaagct
       61 cttttttgtt atatctaatt cgtaatttat gattgtttat tcggtccttt gatgttcact
      121 aaatgtgact ttaaatcttg ttctaattgt tgtaattctt tttcagctaa ttgtcgttct
      181 tcgcgaccgt gttgttgaat aattaatgtt tcttcaattg tctcaataat gttacgctgt
      241 gtacgtttca atgtatcaag atcaacaatg ccacgctcat tttctgttgc agtttcaatc
      301 gcattttgtt tcaacatttc agcatttgct gttaataaat cattagttgt atcagtgaca
      361 gctcgttgtg cagcaactgc attacgctgt ctcattaatg taagcgcaat ggccatttga
      421 tttttccata gtggaatact tgtcaaaatt gaactttgta tcttctcggc aagtgcttga
      481 ttaacatttt gaatcatacg aatttgtggc gcagtttgca aagctatttg tcttgaaagc
      541 tgtaagtcat atatgcgttt atctagtcta tctataaatt gctgcatatc tgcaacttgt
      601 tgaatatcca tttgattagt ggattgctgc gcttgctgtt gcaattgtgg tagcttttca
      661 ttttctaatt gcaacttttt ttgctgtgca gcaatgatat gcaatgataa gtcatcaaag
      721 tattgtttgt ttttatcata tagcgtatct aataattcaa tatctcttgt taaatgtgtt
      781 tgatgtttct gcagttgaat cgttatgcga tcgacttgag cactaactga ttgcattctt
      841 gaaaagattt cattgataga cgactttgct ctgctaaaaa ttctttttaa catagatggt
      901 ttatcagtat ttaactcatt tggattaact gactttagtt ttgacattag atctgacaaa
      961 gtatctccaa taggaccaac atctttactt tgtacttcat ccaacatttg atgtgaaaat
     1021 tgagatattt gtttctgtaa atcagaacca aacgctaata aaccttcatt gtctaaaggg
     1081 ttaatttgtt tactgattgt gtctacctgt ttttgttgtt caattgttaa cttttctttt
     1141 tgaatagtag tattcgataa ttctttatcg cttataaaat catctagtgg atggctttct
     1201 ttgaaacttt tattttcagt catcaatcat ctctccaata gttgctattt tacatcaatc
     1261 ttgatgatgt ttttgatgta acttatttaa ttccatttca atatctaaac gttcataatc
     1321 atcttcgttg agacgcttta aatcagcgat taatgttcgt ttgacctcat ccaaagtaat
     1381 tcgtgtttgt tctaactttt gctgttcatt aattgatttt ttgggcattt ttgctagacg
     1441 tgtatatgca tcaaccaaat ttaaagcatt atcaatatga gaataaaaaa agccttcaac
     1501 tttataaaat gatgcaggtc tctgtctaac tgtcgtataa atagaacgtg aaatttggta
     1561 tatatcatta atctgcctaa aatctttaat tgatcttata ttgacatacg tttttaaaat
     1621 acctctaagt ttttggtgtg tatgatttaa ctgatttcga atatagcgat agtcttttct
     1681 agtcaaacca atttcgttta aatatttgcg tgaagtgagt ttttgtatcg gtaggtatgt
     1741 cattaaaaag ccaacaatac caatagacat atcaattaaa aaagatacat caagtgcaat
     1801 catcccaaat atgcttgtta aaaacgctac aggaattccc actaacaccc caaatatatg
     1861 agaaatatta tatctcactg tcatcttcct ttatttagca ttttatattg atcgaaaatc
     1921 cgataatttt tgatttagtt ctaactcttc aagttgatgg cttgttacat ttgatgctgg
     1981 tgaggcacct tcaattacac cttgaataaa tctctctata tctgcgtcat ccccttgtgc
     2041 atatatctct acatagtcat ctacattttg aacagtaccg acaatgttat agttcattgc
     2101 aatgcgttgt gtaaaatatc taaatccgac gccttgaacg cgtccgaata cttgtaaatg
     2161 tatatgtctc atttttacca cctcataatg ttattatacg tagttttact taaaaaaact
     2221 aataattact atagttacta ctttgtttgt ttcaagtcgt caaacttgat tttcagagga
     2281 taaaggtata aaaataagta tagagttttt gaagtatgga aggggtcttt aataatgtgg
     2341 acagttacca aaattagagc cgattatgag ggatggtggt tattcagtga ctggccagaa
     2401 aacattgttg aaaaatatca atatcaagat tttgatgaca tgtttaagca ctatcaacaa
     2461 ttgattaatc aatgtaaagt tcagttcgat aactatgtca caggcaaata taatatttat
     2521 gcattttata ataattgtga catgaactat tgcgaagatt gtgaagagga tttacaaata
     2581 ttttatagtt tcattgtttt acaaaataat gaagtatatt ataaactacc aataattgat
     2641 taaatgaata ttttttatta ttgtattgca atttggtaat aactgcacta taatacaagt
     2701 taagcagatg attattccat attgcaaaga atatttgagt gaaatttgca tgtatttttt
     2761 gtaatatgcg aataagcata ttgaatgaat tttagtcttg gaggtttcag attatgaaac
     2821 aaggtacagt taaatggttt aacgctgaaa aaggattcgg ctttatcgaa gttgaaggag
     2881 aaaatgacgt attcgtacat ttttcagcaa ttaaccaaga tggttacaaa tcattagaag
     2941 aaggtcaagc tgttgagttt gaagtagttg aaggcgaccg cggtccacaa gctgcaaacg
     3001 ttgttaaact ataattctta gatttgaatc attgatttta actaacacct taccaagaag
     3061 taaggtgttt ttatatgctt attacaaata cttaacgcga tgagtttctc aaccaaattg
     3121 agaactcttt ttttatatca ccaacattgt ttgcaataga aa
//
LOCUS       DALPQQ010000179         3161 bp    DNA     linear   BCT 22-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus strain K18-6-464
            SAMD00233528-rid16434743.denovo.181, whole genome shotgun sequence.
ACCESSION   DALPQQ010000179 DALPQQ010000000
VERSION     DALPQQ010000179.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMD00233528
            Sequence Read Archive: DRR236061
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 3161)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3161)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001543423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001543423.1
            Genome Coverage       :: 77x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/22/2022 17:09:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,811
            CDSs (total)                      :: 2,743
            Genes (coding)                    :: 2,689
            CDSs (with protein)               :: 2,689
            Genes (RNA)                       :: 68
            rRNAs                             :: 2, 4, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 4, 2 (16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 54
            CDSs (without protein)            :: 54
            Pseudo Genes (ambiguous residues) :: 0 of 54
            Pseudo Genes (frameshifted)       :: 27 of 54
            Pseudo Genes (incomplete)         :: 27 of 54
            Pseudo Genes (internal stop)      :: 10 of 54
            Pseudo Genes (multiple problems)  :: 10 of 54
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3161
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMD00233528-rid16434743.denovo.181"
                     /strain="K18-6-464"
                     /db_xref="taxon:1280"
                     /geo_loc_name="Japan: Niigata"
     gene            64..2052
                     /gene="tkt"
                     /locus_tag="O7798_002497"
     CDS             64..2052
                     /gene="tkt"
                     /locus_tag="O7798_002497"
                     /EC_number="2.2.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001661967.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transketolase"
                     /protein_id="HDC2864689.1"
                     /translation="MFNEKDQLAVDTLRALSIDTIEKANSGHPGLPMGAAPMAYTLWT
                     RHLNFNPQSKDYFNRDRFVLSAGHGSALLYSLLHVSGSLELEELKQFRQWGSKTPGHP
                     EYRHTDGVEVTTGPLGQGFAMSVGLALAEDHLAGKFNKEGYNVVDHYTYVLASDGDLM
                     EGISHEAASFAGHNKLSKLVVLYDSNDISLDGELNKAFSENTKARFEAYGWNYLLVKD
                     GNDLEEIDKAITTAKSQEGPTIIEVKTTIGFGSPNKAGTNGVHGAPLGEVERKLTFEN
                     YGLDPEKRFNVSEEVYEIFQNTMLKRANEDESQWNSLLEKYAETYPELAEEFKLAISG
                     KLPKNYKDELPRFELGHNGASRADSGTVIQAISKTVPSFFGGSADLAGSNKSNVNDAT
                     DYSSETPEGKNVWFGVREFAMGAAVNGMAAHGGLHPYGATFFVFSDYLKPALRLSSIM
                     GLNATFIFTHDSIAVGEDGPTHEPIEQLAGLRAIPNMNVIRPADGNETRVAWEVALES
                     ESTPTSLVLTRQNLPVLDVPEDVVEEGVRKGAYTVYGSEETPEFLLLASGSEVSLAVE
                     AAKDLEKQGKSVRVVSMPNWNAFEQQSEEYKESVIPSSVTKRVAIEMASPLGWHKYVG
                     TAGKVIAIDGFGASAPGDLVVEKYGFTKENILNQVMSL"
     gene            2330..2572
                     /locus_tag="O7798_002498"
     CDS             2330..2572
                     /locus_tag="O7798_002498"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011275855.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YneF family protein"
                     /protein_id="HDC2864690.1"
                     /translation="MATWLAIIFIVAALILGLIGGFLLARKYMMDYLKKNPPINEEML
                     RMMMMQMGQKPSQKKINQMMTMMNKNMDQNMKSAKK"
     gene            2559..2657
                     /locus_tag="O7798_002499"
     CDS             2559..2657
                     /locus_tag="O7798_002499"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499868.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDC2864691.1"
                     /translation="MRKSKFAIDRGYFPDMEMASFYNQINKNKYVY"
     gene            2751..>3161
                     /locus_tag="O7798_002500"
     CDS             2751..>3161
                     /locus_tag="O7798_002500"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001566616.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1453 family protein"
                     /protein_id="HDC2864692.1"
                     /translation="MLYLIFSIIVALFMGTIVIVIRMKAQNYPVNEKKIVLPPFFMAT
                     GALMYVVPYFRLTGSEMLEAFIIGLLFSTVLIWTSRFEVKGTEIYMKRSKAFPVILIS
                     LLIIRTVMKIFISNEIDPGELGGMFFLLAFCMIVP"
BASE COUNT         1088 a          440 c          617 g         1016 t
ORIGIN      
        1 tctttttatt ttaaaataag ttataatgta tttgataaaa ttgaagaagg gaagatacac
       61 aagatgttta atgaaaaaga tcaattagct gttgatacgc tacgtgcact aagtatcgac
      121 acaatcgaaa aagcgaattc tggtcatcca ggattaccta tgggagctgc cccaatggct
      181 tacactttgt ggacacgtca tctgaatttt aatccacaat ctaaagatta cttcaataga
      241 gaccgtttcg tattatctgc agggcatggt tcagcattat tgtatagctt gttacatgtt
      301 tctggtagtt tagaattaga agaattaaag caatttagac aatggggttc taaaacacca
      361 ggtcatcctg aatacagaca tacagatggt gtagaagtta ctaccggacc acttggacaa
      421 ggttttgcta tgtcagtagg attagcttta gcagaagatc acctagcagg gaaatttaat
      481 aaagaaggat ataatgttgt agatcattac acatatgtat tagcttctga cggtgattta
      541 atggaaggta tatcgcatga agcagcttca tttgctggac ataataaatt aagtaaatta
      601 gttgttttat acgattcaaa tgatatttca ttagatggcg aattaaacaa agctttttct
      661 gaaaacacaa aagctcgttt tgaagcatat ggttggaatt acttactagt taaagatggt
      721 aatgatttag aagaaattga taaagcgatt actacagcta aatctcaaga aggaccaacg
      781 attattgaag ttaaaacaac aatcggattt ggttcaccga ataaagcagg aactaatggt
      841 gttcatgggg cacctttagg tgaagttgaa agaaaattaa cattcgaaaa ttacggttta
      901 gatcctgaaa aacgttttaa tgtttcagaa gaggtatacg aaattttcca aaatactatg
      961 ttaaaacgtg ctaatgaaga tgaatctcaa tggaattcat tattagaaaa atatgcagaa
     1021 acatatcctg aattagcaga agaatttaaa ttagcgatta gtggtaaatt gcctaaaaat
     1081 tataaggatg aattaccacg ttttgaactg ggtcataatg gtgcatctcg tgctgattct
     1141 ggtactgtta ttcaagcaat cagtaaaact gtcccttcat tctttggtgg atcagcagac
     1201 cttgctggtt caaacaaatc caatgtaaat gatgcaactg attatagttc tgaaacacct
     1261 gaaggtaaaa atgtgtggtt tggtgtacgt gaatttgcta tgggtgctgc tgtaaatggt
     1321 atggctgcac atggaggttt acatccatat ggtgcaacat tcttcgtatt tagtgattat
     1381 ttaaaaccag cgttacgttt atcatcaatt atgggattaa atgcaacgtt catcttcaca
     1441 catgattcaa ttgcagtagg tgaagatggt cctactcatg aaccaattga gcaattagct
     1501 ggattaagag ccattccaaa tatgaatgtt atccgtcctg ctgatggtaa tgaaacaaga
     1561 gtagcatggg aagttgcctt agaatctgaa tctacaccta cttcattagt attgacacgt
     1621 caaaacttac cggtattaga tgtaccagaa gatgtagttg aagaaggcgt tcgaaaaggt
     1681 gcctatacag tttatggctc tgaagagaca ccagaattcc tattattagc ttcaggttca
     1741 gaagttagtc ttgcagttga agctgctaaa gatcttgaaa aacaaggtaa atcagtacgt
     1801 gttgtttcaa tgcctaactg gaatgcattt gaacaacaat ctgaagaata taaagaatca
     1861 gttattccat caagcgtaac aaaacgtgtt gcgattgaaa tggcttcacc gcttggatgg
     1921 cataaatatg taggtactgc aggtaaagtt attgctattg acggctttgg cgcaagtgca
     1981 cctggcgatt tagtagttga aaaatatgga tttacaaaag aaaatatctt aaaccaagtt
     2041 atgagcttat aagaataatt tataaagcga gtatgtttag aagtctagga tgcataatct
     2101 taggcttctt ttaaagtgtt gaaatttaga gtatagcact taaactacat cataagtgat
     2161 aagttatgaa agtatactat ttcagattaa tctttaaaag ctctgttata acagcatgat
     2221 ttttgatatt atttttagta tcgatattaa aatacttgaa taaactagtt cttgaaataa
     2281 tgtgatgaat ttagtaaaat tcagtaggat aaagaaagcg ggtgaaacaa tggcaacttg
     2341 gttagcaatt atttttatag tagctgcatt aattttaggt ttaattggag gtttcctttt
     2401 agctagaaaa tatatgatgg actacttgaa gaaaaaccca ccaatcaacg aagaaatgct
     2461 tcgtatgatg atgatgcaaa tgggtcaaaa accttctcag aagaaaatta atcaaatgat
     2521 gacgatgatg aataaaaata tggatcaaaa tatgaagagt gcgaaaaagt aaattcgcaa
     2581 ttgatagagg ctattttcca gatatggaaa tggcctcttt ttataatcaa attaataaga
     2641 ataaatatgt ttattaaaat taaagttaac aaaatgacga atagactgag aaatgctata
     2701 attcattttg tatgatttac agagagttta tttaacgaga aggtgtctgc gtgctctatt
     2761 taatattttc aatcattgta gctttattta tgggaactat agttatagtt attcgtatga
     2821 aagctcaaaa ttatccggta aatgagaaaa aaatagtttt gccaccgttt tttatggcga
     2881 ccggtgcatt gatgtacgtc gttccatatt ttaggctaac aggatcggaa atgctagaag
     2941 cctttataat tggtttgctt ttttctacag ttctaatttg gacttctcga tttgaagtca
     3001 aaggtacaga aatttatatg aaacgatcta aagcatttcc agttattttg atttcattac
     3061 ttatcattcg tactgtgatg aaaatattca ttagtaatga aatagatcct ggagaattag
     3121 gcggcatgtt ctttttatta gcattctgta tgattgttcc t
//
LOCUS       DALPQQ010000180         3090 bp    DNA     linear   BCT 22-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus strain K18-6-464
            SAMD00233528-rid16434743.denovo.182, whole genome shotgun sequence.
ACCESSION   DALPQQ010000180 DALPQQ010000000
VERSION     DALPQQ010000180.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMD00233528
            Sequence Read Archive: DRR236061
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 3090)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3090)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001543423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001543423.1
            Genome Coverage       :: 77x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/22/2022 17:09:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,811
            CDSs (total)                      :: 2,743
            Genes (coding)                    :: 2,689
            CDSs (with protein)               :: 2,689
            Genes (RNA)                       :: 68
            rRNAs                             :: 2, 4, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 4, 2 (16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 54
            CDSs (without protein)            :: 54
            Pseudo Genes (ambiguous residues) :: 0 of 54
            Pseudo Genes (frameshifted)       :: 27 of 54
            Pseudo Genes (incomplete)         :: 27 of 54
            Pseudo Genes (internal stop)      :: 10 of 54
            Pseudo Genes (multiple problems)  :: 10 of 54
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3090
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMD00233528-rid16434743.denovo.182"
                     /strain="K18-6-464"
                     /db_xref="taxon:1280"
                     /geo_loc_name="Japan: Niigata"
     gene            <1..185
                     /locus_tag="O7798_002501"
     CDS             <1..185
                     /locus_tag="O7798_002501"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_047335196.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="Csa1 family protein"
                     /protein_id="HDC2864693.1"
                     /translation="KELRSRYNISTEKSPILKMHIDGDLKGSSVGYRKLEIDFSKREN
                     SKLSVIEFLSYKPAKK"
     gene            216..1016
                     /gene="lpl2"
                     /locus_tag="O7798_002502"
     CDS             216..1016
                     /gene="lpl2"
                     /locus_tag="O7798_002502"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001269759.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tandem-type lipoprotein Lpl2"
                     /protein_id="HDC2864694.1"
                     /translation="MRYLKKLAWFISVIILGIFIIGCDSSSDTGEKAKEDSKEEQIKK
                     SFAKTLDMYPIKNLEDLYDKEGYRDSEFKKGDKGMWTIYTDFAKSNKPGVLDNEGMIL
                     NLDRNTRTAKGYYFVDTIYDNHENSYSKNYRVEMKNNKIILLDKVEDQKLKERIENFK
                     FFGQYADFKSLKSYNNGDVSINSNVPSYDAKFKMSNKDENVKQLRSRYNIPTEKAPIL
                     KMHIDGDLKGSSVGYKKLEIDFSKEENSELSVVDSLNFQPAKKNKDDE"
     gene            1035..1842
                     /locus_tag="O7798_002503"
                     /pseudo
     CDS             1035..1842
                     /locus_tag="O7798_002503"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000269700.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="tandem-type lipoprotein"
     gene            1891..2691
                     /gene="lpl4"
                     /locus_tag="O7798_002504"
     CDS             1891..2691
                     /gene="lpl4"
                     /locus_tag="O7798_002504"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001797296.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tandem-type lipoprotein Lpl4"
                     /protein_id="HDC2864695.1"
                     /translation="MGYLKRLVLYIVIMVMSVFIIGCDKSSDTAEKSKEDSKETQIKK
                     SFAKTLDMYSIKNLEELYDKEGYRDGEFEKGDKGMWTIYTDFAKSNKPGELSNEGMVL
                     YLDRNTRTAKGYYFVRTFYRKDKLPDRKNYKVEMKNNKIILLDKVEDKKLKQKIENFK
                     FFSQYANLKELKNYSNGDVSINENVPSYDVKYKMSNKDENVKQLRSRYNIPTDKSPVL
                     KMHIDGNLKGSSVGDRKLEIDFSKRENSHLSVIDSLDYQPAKTNKDDE"
     gene            2710..>3090
                     /gene="lpl5"
                     /locus_tag="O7798_002505"
     CDS             2710..>3090
                     /gene="lpl5"
                     /locus_tag="O7798_002505"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000835992.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tandem-type lipoprotein Lpl5"
                     /protein_id="HDC2864696.1"
                     /translation="MKSIKRIGLCISLLILSIFVTSCDGDNKITGDSKETQIKKSFSK
                     TLDMYPIKNLEDLYDKEGYRDGEFKKGDKGMWTIYTDFAKGNKSDELDDEGMVLNLDR
                     NTRTAKGYYFVKKFYEKDKLPDRKN"
BASE COUNT         1299 a          315 c          612 g          864 t
ORIGIN      
        1 ttaaggaatt aagaagtcgt tataatattt cgactgaaaa atcacctata ttaaaaatgc
       61 atattgatgg ggacctgaaa ggcagttctg taggttatag aaagttagaa attgactttt
      121 caaaacgtga aaacagcaaa ttatcagtca ttgaattttt aagttataaa ccagcgaaaa
      181 aatagtattg ataaggaata ttagggtgtg aaaaaatgcg atatctaaaa aagcttgcat
      241 ggttcataag tgttattatt ttgggcattt ttataatagg ttgtgatagt tcaagcgata
      301 ctggggaaaa agcaaaagaa gattcaaagg aagaacaaat caaaaagagc tttgcgaaaa
      361 cattagatat gtatccaatt aagaatctcg aggacttata tgacaaagaa ggatatcgag
      421 atagcgaatt taaaaaaggt gacaaaggga tgtggacgat atatacagat ttcgccaaaa
      481 gtaataaacc gggtgtatta gataatgaag gtatgatttt aaatttggat agaaatacac
      541 gtacggccaa gggatattat tttgtagata ctatatatga caatcatgaa aactcttata
      601 gtaaaaatta tagagttgag atgaaaaaca ataaaattat tttattagac aaggtggaag
      661 atcaaaaact taaagaaaga atagaaaact ttaaattttt cggacaatat gccgatttca
      721 agagtttgaa aagttacaac aatggcgacg tttcaattaa tagtaatgtt ccaagttatg
      781 acgcgaaatt taaaatgagt aataaagatg aaaatgttaa gcaattaaga agtcgttata
      841 acattcctac tgaaaaagct ccaatattaa aaatgcatat tgatggggac ttaaaaggca
      901 gttccgttgg atataaaaag ttagaaatag acttttcaaa agaagaaaat agcgaattat
      961 cagtagtcga ttcattaaat tttcagcctg ccaaaaaaaa taaagatgat gaatgatagg
     1021 gaggatgtga aacaatgtgg tcaataaaaa gaattggaat gtacacaaat gttataattt
     1081 tgagcgtttt tataataggt tgtgatagtt caagcaataa tgcagaaaat caaagagaag
     1141 actcaaaaga agaacaaatc aaaaagagct ttgcgaaaac gttagatatg taccctatta
     1201 agaatctcga ggatttatat gacaaagaag gatatcgtga tggtgagttt gaaaaaggcg
     1261 ataaggggac gtgggtattg tattcagcta tggtatcaca accaaaaggc gagagtttaa
     1321 aatcacgagg aatgatatta aagttagata gaaataagag aactgctaaa ggaagttata
     1381 ttattagaga attgaaagaa gataaaaatc atgatgttca aaaaaatgaa aagaaatatc
     1441 cagtgaaatt ggtgaataat aggatagttt tgataaaaga tgttaaagac aaaaagttaa
     1501 aaaaatgaaa tagagtcgtt tgaattattt tcacaatatg gaaactttaa tcattttgat
     1561 cggaatgaga ttactaatat ttcatataat cctaatgctc ccaattactc tgcagaatat
     1621 aaaatgaaga aaaatgacag aaacattcaa cagttgaaaa agagatttaa tctaaaaact
     1681 agcaagacac caaaattatt gtttaaggga tctggagata taaaggggtc ttctgtagga
     1741 tataaggaaa tagaaatcat atttagtaga agtaaagaag aaagcattta ttatgttgac
     1801 agcgttgagt tcgttccaag taacaaaata acaaaaagtt gatattagtc aacaaaagca
     1861 aatattgaga ataaagagag ttgtgaaatg atgggttatt taaaaagact tgtattgtat
     1921 atagttatta tggttatgag tgtttttata ataggttgtg ataaatcaag cgatactgca
     1981 gaaaaatcaa aagaagactc gaaagaaaca caaatcaaaa agagttttgc gaaaacgtta
     2041 gatatgtatt caattaagaa tctcgaggaa ctatatgaca aagaaggcta tcgagatggc
     2101 gaatttgaaa aaggtgacaa agggatgtgg acgatatata cagatttcgc caaaagtaat
     2161 aaaccgggtg aactaagtaa tgaaggcatg gtcttgtact tagatagaaa cacacgcaca
     2221 gctaaggggt actactttgt caggacgttt tatcgcaagg ataaattacc tgatagaaaa
     2281 aattataaag ttgaaatgaa aaataataaa atcattttat tagataaagt agaagataaa
     2341 aagcttaaac aaaaaataga aaattttaaa tttttcagtc aatatgcaaa tcttaaagaa
     2401 ttgaaaaact acagcaatgg tgatgtctca attaatgaga atgttccaag ttatgacgtg
     2461 aaatataaaa tgagtaataa agatgaaaat gttaagcaat taagaagtcg ttataatatt
     2521 cctactgata aatcaccggt attaaaaatg catattgatg gtaatttgaa aggaagttcc
     2581 gttggagata ggaagttaga aattgatttt tcgaaacgtg aaaatagcca tttatcagta
     2641 atagattctt tggattacca gccagcgaaa actaataaag atgatgaata atgaggatgg
     2701 tgtgtaacaa tgaagtctat aaaaaggatt ggattgtgca taagtctgtt gattttaagc
     2761 atttttgtaa catcttgcga tggtgataat aagatcactg gagattcaaa agaaacacaa
     2821 atcaaaaaga gcttttcgaa aacgttagat atgtatccaa ttaagaatct cgaggactta
     2881 tatgataaag aaggataccg tgatggcgaa tttaaaaagg gcgacaaagg aatgtggact
     2941 atatatacag attttgctaa aggcaataaa tcagacgaat tggatgatga aggtatggtt
     3001 ttaaatctgg atagaaatac tcgaacggct aagggatatt attttgttaa gaaattttat
     3061 gaaaaggata aattacctga tagaaaaaat
//
LOCUS       DALPQQ010000181         3068 bp    DNA     linear   BCT 22-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus strain K18-6-464
            SAMD00233528-rid16434743.denovo.183, whole genome shotgun sequence.
ACCESSION   DALPQQ010000181 DALPQQ010000000
VERSION     DALPQQ010000181.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMD00233528
            Sequence Read Archive: DRR236061
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 3068)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3068)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001543423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001543423.1
            Genome Coverage       :: 77x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/22/2022 17:09:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,811
            CDSs (total)                      :: 2,743
            Genes (coding)                    :: 2,689
            CDSs (with protein)               :: 2,689
            Genes (RNA)                       :: 68
            rRNAs                             :: 2, 4, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 4, 2 (16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 54
            CDSs (without protein)            :: 54
            Pseudo Genes (ambiguous residues) :: 0 of 54
            Pseudo Genes (frameshifted)       :: 27 of 54
            Pseudo Genes (incomplete)         :: 27 of 54
            Pseudo Genes (internal stop)      :: 10 of 54
            Pseudo Genes (multiple problems)  :: 10 of 54
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3068
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMD00233528-rid16434743.denovo.183"
                     /strain="K18-6-464"
                     /db_xref="taxon:1280"
                     /geo_loc_name="Japan: Niigata"
     gene            <1..71
                     /locus_tag="O7798_002506"
     CDS             <1..71
                     /locus_tag="O7798_002506"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001293091.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="terminase small subunit"
                     /protein_id="HDC2864697.1"
                     /translation="VQEVSNANPNHTVIVDDIPLED"
     gene            complement(226..930)
                     /gene="tst"
                     /locus_tag="O7798_002507"
     CDS             complement(226..930)
                     /gene="tst"
                     /locus_tag="O7798_002507"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_111772164.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="toxic shock syndrome toxin TSST-1"
                     /protein_id="HDC2864698.1"
                     /translation="MNKKLLMNFFIVSPLLLATIATDFTPVPLSSNQIIKTAKASTND
                     NIKDLLDWYSSGSDTFTNSEVLDNSLGSMRIKNTDGSISLIIFPSPYYSPAFTKGEKV
                     DLNTKRTKKSQHTSEGTYIHFQISGVTNTEKLPTPIELPLKVKVHGKDSPLKYWPKFD
                     KKQLAISTLDFEIRHQLTQIHGLYRSSDKTGGYWKITMNDGSTYQSDLSKKFEYNTEK
                     PPINIDEIKTIEAEIN"
     gene            complement(1807..2367)
                     /locus_tag="O7798_002508"
     CDS             complement(1807..2367)
                     /locus_tag="O7798_002508"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001035616.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4888 domain-containing protein"
                     /protein_id="HDC2864699.1"
                     /translation="MNKKLLTKTLIASALVLTTVGSGFHSSSNYNGINNVAKAEQTTD
                     NALWKNVRDALKDANIIDKTDNENVKVTYKIENGGENTIEGTANLENISTSNNPKINP
                     QNVTKINITRKNSNYPNIDANNTWKKLTEKLKEKNIVNNGDNVSILSTDPKDETVFGK
                     VGEDKSNVSNRYINPKDINEIQITKK"
BASE COUNT         1049 a          400 c          466 g         1153 t
ORIGIN      
        1 cggtacaaga ggtatctaac gctaatccta atcatactgt gattgtggat gatataccgt
       61 tagaggattg attacagtaa aaacgattat catattgagt tagtgaggat tagtttacta
      121 attcacccta gctttatatt aaagcgttat aaagataaaa gggagaacgc ttattataat
      181 taacggactc cctttattaa taattattac agaaaaagtg gtaaattaat taatttctgc
      241 ttctatagtt tttatttcat caatatttat aggtggtttt tcagtattgt attcaaactt
      301 tttagataaa tcactttgat atgtggatcc gtcattcatt gttattttcc aataaccacc
      361 cgttttatcg cttgaacgat ataatccatg tatttgagtt agctgatgac gaatttcaaa
      421 gtctaaagtt gatatagcta attgtttttt atcgaacttt ggccaatact ttaaggggct
      481 atctttacca tgaaccttaa cttttaaagg tagttctatt ggagtaggta atttttcagt
      541 atttgtaacg ccacttattt ggaaatggat ataagttcct tcgctagtat gttggctttt
      601 tttagttctt tttgtgttta agtcaacttt ttcccctttt gtaaaagcag ggctataata
      661 aggactcgga aaaattataa ggctgatgct gccatctgtg ttttttatac gcatagatcc
      721 taaggaatta tctaaaactt cactatttgt aaaagtgtca gacccactac tataccagtc
      781 tagcaaatcc tttatattat cgtttgtaga tgcttttgca gttttgatta tttgattaga
      841 tgataaggga acaggggtaa aatctgtagc gattgtcgca agcaacaaag ggcttacgat
      901 aaaaaaattc attagtaatt ttttattcat ttttaattct ccttcattca aatgtgtaaa
      961 cgtttacata tagaatgtat aaatattatt taaatgaatc aattaaccat ctctaaatta
     1021 ttgtttaaat atatattaat taaaaagtgt ttgttacata gggagctata tcaaaaaaat
     1081 atagatttaa acaacatttt aaagttacaa atagcaaaaa acaaagtgtg agtggtcatt
     1141 taaagaatat taattaatat aagtttgaat tagttatatt ctttaaagtc actttctagt
     1201 ggcgtttttt acgctgagaa acgtcctgtg ttgcagtaag gtataatatt gtgtaagtag
     1261 atatgtttat cgtaaatgtg gatccgtgaa atatgacttt aaacatcgct ggtcaatcta
     1321 tctttgagat tggccgtaga ttaaaaccat atgaaacaaa atgacttagt ggatggggaa
     1381 tttacgctat ggcttgaaaa ttggattaag caaattatca gataatagat ttatgaaaat
     1441 agctgaaaat ccagaattaa atgtcctacc attggaatat atgggcgcat gtattttata
     1501 ctaattagca acattaccgc aagaagagaa aggataagag tatttcacta aaggtgagaa
     1561 gtaaaaaaac aattgatatg actaggagag aattagaata ccttaaaaag gaattgaaac
     1621 aacgcgatga aaaaacgcac aactccaatc acaaatgaaa aagcacaact ttttgaggag
     1681 atagagagaa agtaattaaa ggaagttaaa ggtaaagaat ctgaagtaat tgagtgttac
     1741 atagatccag aagattatca ctgttcaaaa gaaaagaggc aggagtaatc tgcctctcga
     1801 aaaaagttat tttttagtga tttgaatttc atttatatct ttaggattga tgtatctatt
     1861 gcttacgttt gatttatctt ctcctacttt accgaataca gtctcatctt tagggtctgt
     1921 acttaagatt gaaacattgt cgccgttgtt cactatattt ttttctttca atttttctgt
     1981 taattttttc catgtattat tagcatcaat attaggatag ttcgaatttt ttctagttat
     2041 attaattttt gtaacatttt gagggtttat tttaggattg tttgaagtac taatattttc
     2101 taaattagct gttccttcta tggtattttc tccaccattt tctattttat acgtaacctt
     2161 gacattttca ttatctgttt tatcgataat attcgcgtct tttaaagcgt ctcttacatt
     2221 tttccacaat gcgttatctg tcgtttgctc agcttttgca acgttattaa taccattata
     2281 atttgaagaa gaatgaaaac ctgaacctac tgttgttaaa actaaagcac ttgctatcaa
     2341 tgtttttgtt aatagttttt tattcatttt atttcctcct ataacttatt tgcaatcaat
     2401 tacaaagtaa ttttacaatt attatttatg taaatcaatt aaataattat taacaaatcc
     2461 ataaaatttt atcattaaaa tataataatt ttgagctaga agtattcgtc atttatgcta
     2521 taatcatttt agacacagca atgtgttcaa attttcatct attcgtaagt tagccttcgg
     2581 gctgactttt tatttccatt attattcaca tgttaatctt gttgatattt aggcaagtac
     2641 ttcggtactt gcctattatt atatctctat acgataggaa tcgactatat gacttactaa
     2701 gttttatagc aaaataggca attaacgcat atggcattta acattgagtt gttatagtag
     2761 ttgtataata tatagctagt tccttataac agcaaaaaaa taattttgac tataagatta
     2821 aatatatgaa tataaaatta acagtagaaa ccaattttag aatttgcaaa aatgaatgca
     2881 ttaattataa aagtgtgaat atataaacaa tgttattaat tcaagatgct tagaaatcct
     2941 ctgtttttcc tagagaaaga gttttgtata taagttcaaa tgaaatatag ttaattaatt
     3001 ttcaaagcat aacttagttc ctataaataa agagaaatca ttaaatataa ttaattttct
     3061 tttaatat
//
LOCUS       DALPQQ010000182         3062 bp    DNA     linear   BCT 22-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus strain K18-6-464
            SAMD00233528-rid16434743.denovo.184, whole genome shotgun sequence.
ACCESSION   DALPQQ010000182 DALPQQ010000000
VERSION     DALPQQ010000182.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMD00233528
            Sequence Read Archive: DRR236061
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 3062)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3062)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001543423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001543423.1
            Genome Coverage       :: 77x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/22/2022 17:09:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,811
            CDSs (total)                      :: 2,743
            Genes (coding)                    :: 2,689
            CDSs (with protein)               :: 2,689
            Genes (RNA)                       :: 68
            rRNAs                             :: 2, 4, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 4, 2 (16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 54
            CDSs (without protein)            :: 54
            Pseudo Genes (ambiguous residues) :: 0 of 54
            Pseudo Genes (frameshifted)       :: 27 of 54
            Pseudo Genes (incomplete)         :: 27 of 54
            Pseudo Genes (internal stop)      :: 10 of 54
            Pseudo Genes (multiple problems)  :: 10 of 54
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3062
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMD00233528-rid16434743.denovo.184"
                     /strain="K18-6-464"
                     /db_xref="taxon:1280"
                     /geo_loc_name="Japan: Niigata"
     gene            81..2354
                     /gene="recJ"
                     /locus_tag="O7798_002509"
     CDS             81..2354
                     /gene="recJ"
                     /locus_tag="O7798_002509"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500251.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="single-stranded-DNA-specific exonuclease RecJ"
                     /protein_id="HDC2864700.1"
                     /translation="MIKPKYKWKLTKPAEYISDELTSKLKLTPIVKKILESKSIIDEQ
                     AIESIISDTDINHDALQLSDMTKTIERIKRAIANDEKILVYGDYDADGVTATTILVIT
                     LQLLGAQVGWHIPNRFTEGYGPNELAFRNAHDEGITLIITVDNGIQGHNEIKMVQDLG
                     VDVIVTDHHEIGSTLPEAYAIVHPMHPSFNYPFQQLCGAGVAYKLAQALIENVPDYFK
                     ALVAIGTIADLVSLTDENRSLVKQGLKVLNDQCPTSVKALLKEAGYNDNIDEETIGFI
                     IGPRLNAVGRLDDASLACELLMTDVEEEAAFLAEQVEHFNRERKDIVATITEEAMAMA
                     ETKVKKGDLFLLLAKENWHEGVLGIVASKIVETFALPTLILNIDREQNHAKGSARSID
                     QVSMFEILSAHQELIAKFGGHHMAAGMTMDIENIESLAEGLNKWMKELSKTTSLDPVK
                     QVDVLLTENDITIKNIRDMNRLRPFGTDFSRPIFEMDDLSVSSVKAIGQQKNHLKLTL
                     GESNIAALFWQNGHLEPELQDEQPINILGSVQINEWNGNQSPQIIIQDIAMNEQQILD
                     YRSKRKSLPFTENDENIVVLIHPKSDKVNANEYYYGEEIKQQTDKVVLRDLPTSMEDL
                     SNSLQQLQFSQLYIVLQHNHSIYFDGIPNMDIFKKCYKALITKQETNIQKEGMLLCQH
                     LSVKPDTLKFMLKVFLDLKFVTQEDGLIRINQQPDKRSIDSSKVYQLRQQRMDVEKQL
                     LYQDFSEIKNWIKSQLS"
     gene            2376..2894
                     /locus_tag="O7798_002510"
     CDS             2376..2894
                     /locus_tag="O7798_002510"
                     /EC_number="2.4.2.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009559512.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adenine phosphoribosyltransferase"
                     /protein_id="HDC2864701.1"
                     /translation="MDLKQYVSEVQDWPKPGVSFKDITTIMDNGEAYGYATDKIVEYA
                     KDRDVDIVVGPEARGFIIGCPVAYSMGIGFAPVRKEGKLPREVIRYEYDLEYGTNVLT
                     MHKDAIKPGQRVLITDDLLATGGTIEAAIKLVEKLGGIVVGIAFIIELKYLNGIEKIK
                     DYDVMSLISYDE"
BASE COUNT         1149 a          406 c          568 g          939 t
ORIGIN      
        1 gtcttgatta tttagataag tgctttttat ttaaagtaat tttagatata atgtcttttg
       61 gaaatgaggc gtaaatatat atgattaaac cgaagtataa gtggaaatta actaaaccag
      121 ctgaatacat aagtgatgaa ttaacatcaa aattaaagtt aacgccaatc gtaaaaaaaa
      181 tattagaaag taaatcgatt attgatgaac aagcaataga atccatcatt tcagatacag
      241 atatcaatca tgatgcactg caattgagcg atatgactaa gactattgaa agaattaaaa
      301 gagcgatagc gaatgatgag aaaatcctag tttatggtga ttacgatgcc gacggtgtta
      361 ccgcaactac aattttagtg ataacattac aacttttagg tgcacaagta ggatggcata
      421 ttcctaaccg ctttaccgaa ggatatggac caaacgaact agcatttaga aatgctcatg
      481 atgaaggcat aacattaatc ataactgttg ataatggcat acaaggtcat aatgaaatta
      541 aaatggttca agatttagga gttgatgtca ttgtaactga tcatcatgaa attggtagta
      601 cattaccaga agcatatgca atcgtacatc caatgcatcc atcgtttaat tatccgttcc
      661 aacaattgtg tggtgcaggt gttgcataca aattagcaca agcattgatt gaaaatgtac
      721 ctgattattt taaagcatta gttgcgatag gtaccattgc ggatttagta tccttaactg
      781 atgaaaatcg atcattagtg aaacaaggat taaaagtctt aaatgatcaa tgtccgacct
      841 ctgttaaagc attgctaaaa gaagcgggat acaatgacaa tattgatgaa gaaacaattg
      901 gttttattat tggacctaga cttaatgctg taggtcgttt agatgacgca tcattagctt
      961 gcgaattgtt gatgactgac gtcgaagaag aagctgcatt tttagcagaa caagttgaac
     1021 attttaaccg tgaaagaaaa gatattgtag caactatcac agaagaagca atggctatgg
     1081 cagaaacgaa agttaaaaag ggagatttat ttttactttt agcaaaagaa aattggcatg
     1141 aaggtgtctt aggtattgtt gcttcgaaaa ttgtcgaaac atttgctttg ccaacattaa
     1201 ttttaaatat tgatagggag caaaatcatg caaaaggctc cgccagatca attgatcaag
     1261 tgtcgatgtt tgaaatacta tcagcacatc aagagttaat cgctaaattt ggcggccatc
     1321 atatggctgc aggtatgacg atggatattg aaaatataga atcgttagct gaaggtttaa
     1381 ataaatggat gaaagaatta tctaaaacaa cttcgttaga tcccgtaaag caagtagatg
     1441 tattattaac agaaaatgat ataacgatta aaaatattcg tgatatgaat cgtttaagac
     1501 ccttcggaac agatttttct agacctattt ttgaaatgga tgatttatca gtttcttcag
     1561 ttaaggcgat aggtcaacaa aaaaatcatc taaaattgac acttggtgaa agtaatatcg
     1621 ccgcgctatt ttggcaaaat ggacacttag aacctgagtt acaagatgaa cagccaatta
     1681 atatattagg atctgttcaa atcaacgaat ggaatggtaa tcaatcaccg caaataatta
     1741 ttcaagatat tgcgatgaat gaacagcaaa tattagatta tagaagtaag cgaaaaagtt
     1801 taccttttac agaaaatgat gaaaatattg tcgtgcttat tcatcctaaa agtgataaag
     1861 taaatgcgaa tgaatattat tatggtgaag aaattaaaca acaaactgat aaagtagtat
     1921 taagagattt accaacgtca atggaagact tgtctaattc cttgcaacaa ctgcaatttt
     1981 ctcaacttta tatagttttg caacataatc attcgattta cttcgatggt atacctaata
     2041 tggatatttt taaaaagtgt tataaagcat taataactaa acaagaaaca aatatccaga
     2101 aagagggtat gttattgtgt caacatttaa gtgtgaaacc agatacactt aaattcatgt
     2161 tgaaagtttt cttagactta aaatttgtaa cacaagaaga tggtttaatt cgaatcaatc
     2221 aacaacctga taaaagatcg attgattcca gcaaagtata tcaattaaga caacaacgta
     2281 tggatgttga aaagcaatta ttatatcaag atttttcaga aataaaaaat tggataaagt
     2341 cacaattgtc gtgagcaatt taggaggaaa tattaatgga tttaaagcaa tacgtatcag
     2401 aagttcaaga ttggccgaaa ccaggtgtta gtttcaagga tattactaca attatggata
     2461 atggtgaagc atatggctat gcaacagata aaattgtaga atacgcaaaa gacagagatg
     2521 ttgatatcgt tgtaggacct gaagcgcgtg gctttatcat tggctgtcct gtagcttatt
     2581 caatggggat tggctttgca cctgttagaa aagaagggaa attacctcgt gaagtcattc
     2641 gttatgagta tgacctagaa tatggtacaa atgttttaac aatgcacaaa gatgcaatta
     2701 aaccaggtca acgtgtgtta attacagatg atttattagc tactggtggt acgattgaag
     2761 cagcaataaa attagttgaa aaattaggcg gtatcgtagt aggtattgca tttataattg
     2821 aattgaaata tttaaatggt attgaaaaaa ttaaagatta cgatgttatg agtttaatct
     2881 catacgacga ataataaata atataatttt atcaaatgaa atccttcatc aaatgtataa
     2941 gaaccaatga cttaattaaa aaagttgttt aagttttctt aacatgagat gttaggattt
     3001 tttatttact gaaaatgtta gatgattgag cattatacct taataacatc gtttatttat
     3061 tt
//
LOCUS       DALPQQ010000183         2924 bp    DNA     linear   BCT 22-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus strain K18-6-464
            SAMD00233528-rid16434743.denovo.185, whole genome shotgun sequence.
ACCESSION   DALPQQ010000183 DALPQQ010000000
VERSION     DALPQQ010000183.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMD00233528
            Sequence Read Archive: DRR236061
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 2924)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2924)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001543423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001543423.1
            Genome Coverage       :: 77x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/22/2022 17:09:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,811
            CDSs (total)                      :: 2,743
            Genes (coding)                    :: 2,689
            CDSs (with protein)               :: 2,689
            Genes (RNA)                       :: 68
            rRNAs                             :: 2, 4, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 4, 2 (16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 54
            CDSs (without protein)            :: 54
            Pseudo Genes (ambiguous residues) :: 0 of 54
            Pseudo Genes (frameshifted)       :: 27 of 54
            Pseudo Genes (incomplete)         :: 27 of 54
            Pseudo Genes (internal stop)      :: 10 of 54
            Pseudo Genes (multiple problems)  :: 10 of 54
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2924
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMD00233528-rid16434743.denovo.185"
                     /strain="K18-6-464"
                     /db_xref="taxon:1280"
                     /geo_loc_name="Japan: Niigata"
     gene            <1..1235
                     /locus_tag="O7798_002511"
     CDS             <1..1235
                     /locus_tag="O7798_002511"
                     /EC_number="3.1.11.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500134.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="exodeoxyribonuclease VII large subunit"
                     /protein_id="HDC2864702.1"
                     /translation="FKKHSSGHLYFNVKDKESVISAMMFKGSASKLNFEPKEGDEVLL
                     EARVSVFERRGNYQIYVNKMQLDGIGNLYQKLEALKKKLTEEGCFDKANKKSIPKFPK
                     KIAVLTASTGAAIRDIHSTINSRFPLAEQIQISTLVQGEKAKDDIIEKIEYADSLGVD
                     TIIVGRGGGSIEDLWNFNEEAVVRAIYNCKTPIISAVGHETDFTLSDFAADIRAATPT
                     QAAVIATPDQYELLQQIQQYQFTLTRFIKKHLEQQRKHVEHLSSYYKFKQPTLLYDQQ
                     IQRRDDLEKRLKQQIQATFEQQRHRLMLLQQRYNLKALLSSVNQEQQNNLQLTNQLVK
                     LLNSKILSYKNDLKNKVENLNNLSPTNTMLRGYAIVNKKDEVITSTKDLTENDQLTLT
                     MKDGLVDAKVTKVRCNND"
     gene            1228..1458
                     /locus_tag="O7798_002512"
     CDS             1228..1458
                     /locus_tag="O7798_002512"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500133.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="exodeoxyribonuclease VII small subunit"
                     /protein_id="HDC2864703.1"
                     /translation="MTKETQSFEEMMQELEQIVQKLDNETVSLEESLDLYQRGMKLSA
                     ACDTTLKNAEKKVNDLIKEEAEDVKNDESTDE"
     gene            1436..2317
                     /locus_tag="O7798_002513"
     CDS             1436..2317
                     /locus_tag="O7798_002513"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500132.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polyprenyl synthetase family protein"
                     /protein_id="HDC2864704.1"
                     /translation="MTNLPMNKLIDEVNNELSVAINKSVMDTQLEESMLYSLNAGGKR
                     IRPVLLLLTLDSLNTEYELGMKSAIALEMIHTYSLIHDDLPAMDNDDYRRGKLTNHKV
                     YGEWTAILAGDALLTKAFELISSDDRLTDEVKIKVLQRLSIASGHVGMVGGQMLDMQS
                     EGQPIDLETLEMIHKTKTGALLTFAVMSAADIANVDDTTKEHLESYSYHLGMMFQIKD
                     DLLDCYGDEAKLGKKVGSDLENNKSTYVSLLGKDGAEDKLTYHRDAAVDELTQIDEQF
                     NTKHLLEIVDLFYSRDH"
     gene            2749..>2924
                     /locus_tag="O7798_002514"
     CDS             2749..>2924
                     /locus_tag="O7798_002514"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500131.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arginine repressor"
                     /protein_id="HDC2864705.1"
                     /translation="MPKKSVRHIKIREIISNEQIETQDELVKRLNDYDLNVTQATVSR
                     DIKELQLIKVPIPSG"
BASE COUNT         1149 a          387 c          523 g          865 t
ORIGIN      
        1 atttcaaaaa gcattcaagt ggtcatttat actttaatgt gaaagataaa gaaagcgtta
       61 taagtgccat gatgttcaaa ggtagtgctt ctaaattaaa cttcgaacct aaagaaggag
      121 atgaagtctt attagaagca cgtgtttctg tttttgaacg tcgtggaaac tatcaaattt
      181 atgtaaataa aatgcaatta gatggtatag ggaacttata tcaaaaatta gaagcattaa
      241 agaaaaaatt aactgaagaa ggttgttttg ataaagcgaa taagaaatca atacctaagt
      301 ttcctaaaaa aattgcagtt ttaacagcga gtacaggtgc cgcaattcga gatatccatt
      361 caacgataaa tagtcgtttt ccattagctg aacaaataca aattagtact ttggttcaag
      421 gtgaaaaagc aaaagacgac attattgaaa aaattgaata tgcagatagt ttaggtgtag
      481 ataccattat tgtaggtcga ggcggtggat ccatagaaga tttatggaat ttcaacgaag
      541 aagctgtcgt ccgtgcaata tataattgta agacaccgat tatatcagca gttggtcatg
      601 aaacagactt tacattaagt gattttgctg cagacatcag agctgcgact ccaactcaag
      661 ctgctgttat tgcaacacca gaccaatatg aattgctgca acaaatacag caatatcagt
      721 ttacattgac tcgtttcatc aagaaacatt tagaacaaca acgtaaacat gttgaacatt
      781 tgtcatcgta ttacaagttt aaacaaccaa ctttattgta tgatcaacag atacaacgtc
      841 gagatgattt agaaaagaga ctgaaacaac aaattcaggc aacttttgaa caacagagac
      901 atcgattaat gctgttgcaa caacgttata atttaaaagc attactaagt agtgttaatc
      961 aagaacaaca aaataatctt caattgacaa accaacttgt taaattattg aattctaaga
     1021 tattaagtta taaaaatgat ttgaaaaata aagtagaaaa cttaaacaat ttaagtccaa
     1081 ctaatacaat gttgcgtgga tatgcaattg ttaataaaaa agacgaagtc attacgagta
     1141 ctaaagattt aacagaaaat gatcaattga cgttaacaat gaaagatggc ttagtagatg
     1201 caaaagttac gaaagtaagg tgtaataatg actaaagaaa cgcaaagttt tgaagaaatg
     1261 atgcaagaat tagagcaaat tgttcaaaaa ttagataatg aaacagtatc tttagaggaa
     1321 tcattagatt tatatcaacg tggtatgaaa ctatcagcag cttgtgacac aactttaaaa
     1381 aatgccgaaa aaaaggtgaa tgacttaata aaagaagaag ctgaggatgt aaaaaatgac
     1441 gaatctaccg atgaataaat taatagatga agtcaataat gaattatcgg ttgcgataaa
     1501 taaatcagta atggatactc agctagaaga aagtatgttg tattcattaa atgctggagg
     1561 taaacgcatc cgaccagttc tgttattact cactttagat tcactaaata ccgagtatga
     1621 gttaggtatg aagagcgcaa ttgcactaga aatgattcat acatattcac ttattcatga
     1681 tgacctacca gcgatggata atgatgatta tcgacgagga aaattaacaa atcataaagt
     1741 atatggtgag tggactgcga tattagcagg tgatgcttta ttaactaaag catttgaact
     1801 tatttcaagt gatgatagat taactgatga agtaaaaata aaagttctac aacggctgtc
     1861 aatagcaagt ggtcatgttg gaatggtcgg cggtcaaatg ttagatatgc aaagcgaagg
     1921 ccaaccaatt gatcttgaaa ctttggaaat gatacacaaa acaaaaacag gagcattatt
     1981 aacttttgcg gttatgagtg cagcagatat cgctaatgtc gatgatacaa ctaaagaaca
     2041 tttagaaagt tatagttatc atttaggtat gatgttccag attaaagatg atttattaga
     2101 ctgctatggt gatgaagcaa agttaggtaa aaaagtgggc agcgatcttg aaaataataa
     2161 aagtacgtac gtgagtttat tagggaaaga tggcgcagaa gataaattga cttatcatag
     2221 agacgcagca gtggatgaac taacgcaaat tgatgaacaa ttcaatacaa aacacttatt
     2281 agaaatcgtt gatttatttt atagcaggga tcactaaaag caaatatatc gattagcaac
     2341 aattgtaaag tttgaaatgt ctcaaaaggc atattcaact gacgttgttt gttaatcgat
     2401 ttttctcatg ttgaaactta aaattatgtt gaagactttc atttaaaaaa tagaattttc
     2461 aatttctata cgacaatatt cgtatctgtg atatcaatgt gattttaatt aaatatgttc
     2521 aaacaattga cgcttattaa atctaataat tagcaagttt attacacata tattcatttt
     2581 tatacatatt ttaagcaatt gttatgcgta atatgaaaaa tatttataaa tagataacca
     2641 agatagataa accatgttta ccctttttac gtaaaggtgt ttagtagtcg taaatcagtg
     2701 catgtgttaa aataaatgta taaatattcg taatcagagg tgtttactgt gcccaaaaaa
     2761 tcggttaggc atataaaaat tagagaaatt atttcaaatg aacagataga gacacaagat
     2821 gaattagtta aacgattaaa cgattatgat ttaaatgtca ctcaagcaac tgtttctcgt
     2881 gatattaaag aactacaact tattaaagta cctatacctt cagg
//
LOCUS       DALPQQ010000184         2917 bp    DNA     linear   BCT 22-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus strain K18-6-464
            SAMD00233528-rid16434743.denovo.186, whole genome shotgun sequence.
ACCESSION   DALPQQ010000184 DALPQQ010000000
VERSION     DALPQQ010000184.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMD00233528
            Sequence Read Archive: DRR236061
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 2917)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2917)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001543423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001543423.1
            Genome Coverage       :: 77x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/22/2022 17:09:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,811
            CDSs (total)                      :: 2,743
            Genes (coding)                    :: 2,689
            CDSs (with protein)               :: 2,689
            Genes (RNA)                       :: 68
            rRNAs                             :: 2, 4, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 4, 2 (16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 54
            CDSs (without protein)            :: 54
            Pseudo Genes (ambiguous residues) :: 0 of 54
            Pseudo Genes (frameshifted)       :: 27 of 54
            Pseudo Genes (incomplete)         :: 27 of 54
            Pseudo Genes (internal stop)      :: 10 of 54
            Pseudo Genes (multiple problems)  :: 10 of 54
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2917
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMD00233528-rid16434743.denovo.186"
                     /strain="K18-6-464"
                     /db_xref="taxon:1280"
                     /geo_loc_name="Japan: Niigata"
     gene            <1..1916
                     /gene="rsp"
                     /locus_tag="O7798_002515"
     CDS             <1..1916
                     /gene="rsp"
                     /locus_tag="O7798_002515"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501126.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="AraC family transcriptional regulator Rsp"
                     /protein_id="HDC2864706.1"
                     /translation="IELMIPVFYFYQQDDDFFNGYLDRHLLQSSNYIKSLIADLISTP
                     TSSSLMGKNIGQSIIDTLLKEAFIRIDHEYLPNIALSNPVFIDCVNYIHDNIDAHLSL
                     KDIAMHCNISESYCSNLFVRYLSMNFKDYFTSIKLVNAINLLLSTKHSITTVSELAGF
                     NSHTNFANQFKNYLHFSPKQFRSLVSKITEPPQIHFQQDNVSQFTELISTIDLTAQLA
                     TNTTDIHIDDFNPKDRSQRAKVFVRFSNFNELFQFIFNEYYDINFEHLPKPVVFIDDI
                     HDIEISQTNYNLLNRCFEKLFEKNIGLAIAIKSTQQFETMKQLILTFLQGNQDYKTSK
                     KLVKFMLVFCSNSMTAEEIHLCHLKIKNKNKEIKYSVTVDGFLETYSTVEQVYDVMQR
                     LKFHYYFIDIENSKTATHLITKNQHYHQTDTHFEQYKKFILDSGISSTQFVYNNLSVS
                     GFKYTNDGKNPIQLSDIVYHLIALLRYGGGISYQLLDDHSNYISLYNKYGSPLPLMHL
                     YKMFRPFVNEDIEITNNYVLSRKDNNYHFLLFNKINDRYMSDVKQDFIFHNELPQDSL
                     MIIKTLNHEHGSIQHLLPISDQLVYIEKEILDELDKTNYPKTELAVQEETGRTFELKL
                     NHDEVKYICFKPS"
     gene            1987..2409
                     /locus_tag="O7798_002516"
     CDS             1987..2409
                     /locus_tag="O7798_002516"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501127.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxamine 5'-phosphate oxidase family
                     protein"
                     /protein_id="HDC2864707.1"
                     /translation="MSNSQAIQAIENVLATSKVGVLSTAYNNKPNSRYMVFYNDGLTL
                     YTKTNIHSAKVKEIKDNPAAYVLLGYNDTTNRSFVEMEATIEIVTEQEVIDWLWETQD
                     KSFFSSKEDPELCVLRVVPQSIKLMNDKSLDTPIKIDL"
     gene            2674..>2917
                     /locus_tag="O7798_002517"
     CDS             2674..>2917
                     /locus_tag="O7798_002517"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501128.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4889 domain-containing protein"
                     /protein_id="HDC2864708.1"
                     /translation="MKKKKGFGLGISLIAIMLIVCIVLVIMMMTGGKKDTYYGIMKDN
                     TTIEKMISEKDESIEKNVKLPSDSDVKVKKGDFVIVY"
BASE COUNT         1090 a          420 c          414 g          993 t
ORIGIN      
        1 taatcgaatt aatgataccc gttttttatt tttatcaaca agatgatgat ttctttaatg
       61 gttatttaga tcgtcattta ttacaatcaa gtaattatat taagtcatta attgccgatt
      121 taatcagtac accaacaagt tcttctttaa tggggaaaaa tataggtcaa agtattatag
      181 acactttact taaagaagct tttataagaa tagatcatga atatttacca aatattgctt
      241 taagcaatcc ggtgttcata gactgtgtaa actatattca tgacaatatt gatgcgcact
      301 tgtctttaaa agatatagcg atgcattgca acatctctga atcatattgt tctaatcttt
      361 ttgttcgata tttgagtatg aattttaaag attattttac aagtattaaa cttgttaacg
      421 ccatcaattt attactttct acaaaacatt ctattacaac tgtttctgaa ttggccggtt
      481 ttaacagtca tacaaatttt gcaaatcaat ttaagaatta cttgcatttt agtcctaaac
      541 agttccgttc actcgtttcc aagattactg aaccaccaca aatacacttc caacaagata
      601 acgtatcaca attcactgag ttaatttcaa caattgattt aacagctcaa ctggctacaa
      661 atacaacaga tattcatata gatgatttta atccgaaaga tcgaagtcag cgtgccaaag
      721 tatttgttcg atttagtaat ttcaatgaac tatttcaatt tattttcaat gaatattacg
      781 atattaactt tgagcactta ccaaaacctg tcgttttcat tgacgatatt cacgatattg
      841 agattagcca aacgaattac aacctgttaa atagatgttt tgaaaagctt ttcgaaaaaa
      901 atataggttt agcaatcgct attaaatcaa cacaacaatt cgaaacgatg aagcaattaa
      961 tactaacatt tttacaaggc aatcaagact ataagacaag caagaaatta gttaaattta
     1021 tgctcgtatt ttgctctaat tctatgacag cagaagaaat tcatttatgt catcttaaaa
     1081 ttaaaaacaa aaataaagaa attaaatata gtgtgacagt cgatggcttt ttagaaactt
     1141 attcaaccgt ggaacaagtt tatgatgtca tgcagcgtct taaattccat tattacttta
     1201 ttgatattga aaattcaaaa actgcaacac atcttatcac taaaaaccaa cactatcatc
     1261 aaactgacac tcattttgaa cagtataaga aatttatttt agattcaggt atatcatcaa
     1321 cacaatttgt atataataac ctgtctgtaa gcggatttaa atatactaat gatggtaaga
     1381 atccaattca attatctgac atagtgtatc acttaatcgc attattacga tatggcggtg
     1441 gcattagcta tcaattatta gatgaccatt caaattatat ttccttgtac aacaaatatg
     1501 gtagccccct accattaatg catttatata aaatgtttag accttttgtt aatgaagata
     1561 ttgaaattac aaataattat gtattgagtc gtaaagataa taactaccat ttcttattat
     1621 tcaataaaat taatgatcga tatatgtcag acgtaaaaca agatttcatt ttccataatg
     1681 aattacctca agactctttg atgattatta aaacattgaa tcatgaacat ggttcaattc
     1741 aacatttgct tccaataagc gatcaacttg tttatataga aaaagaaatt ttagatgaat
     1801 tagacaaaac gaattaccct aaaacggagc ttgcagttca agaagaaact ggtcgtacat
     1861 ttgaactcaa gttaaatcac gacgaggtta aatatatttg ctttaaacca agctaaatac
     1921 taacagtcct cttgtgttta gtttcttacg ttaaaggcta tttatatcat aaggagatga
     1981 tttgtaatga gtaactcaca agcaattcaa gcaattgaaa acgtgttagc aacgtcaaaa
     2041 gttggtgtat tatcaactgc atataataat aaacctaata gtagatatat ggtcttttat
     2101 aatgatggtc ttactttata tactaaaacg aatatccatt ctgctaaggt caaagaaatt
     2161 aaagataatc cagcagcata tgttttgtta ggctataacg acacaactaa tcgtagtttc
     2221 gttgagatgg aagcgacaat cgaaatcgtt acagaacaag aagtgattga ttggctatgg
     2281 gaaacacaag acaaaagctt tttcagttca aaagaagacc cagagttatg tgttttaaga
     2341 gtagttccgc aatccattaa gctaatgaat gataaatcat tagatacacc tatcaaaatc
     2401 gatttataac acaaagtgta tataggaaat aacttttatg aattctagat ataacaatgt
     2461 taaatactta aaataactcg ctataattaa agtgtttaat atgtttacaa ttcaatttgc
     2521 aatatattgt tttttagaca cactttattc acatttaacg tgattagggt gtgtcttttt
     2581 aaattaattt tatgtaatat aaatactgca tttgcaaact gttgcacttt taggtataac
     2641 agaattaact acatttaagg agattgatga accatgaaaa agaaaaaagg ttttggtctt
     2701 ggtattagtt taatcgccat catgttaatt gtatgtattg tattagtaat catgatgatg
     2761 actggcggaa agaaagatac atactatgga attatgaaag ataatactac tattgaaaaa
     2821 atgattagtg aaaaagatga aagtattgaa aaaaatgtta aattaccttc agattcagat
     2881 gttaaagtta aaaaaggtga ttttgtaatt gtttata
//
LOCUS       DALPQQ010000185         2883 bp    DNA     linear   BCT 22-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus strain K18-6-464
            SAMD00233528-rid16434743.denovo.187, whole genome shotgun sequence.
ACCESSION   DALPQQ010000185 DALPQQ010000000
VERSION     DALPQQ010000185.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMD00233528
            Sequence Read Archive: DRR236061
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 2883)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2883)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001543423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001543423.1
            Genome Coverage       :: 77x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/22/2022 17:09:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,811
            CDSs (total)                      :: 2,743
            Genes (coding)                    :: 2,689
            CDSs (with protein)               :: 2,689
            Genes (RNA)                       :: 68
            rRNAs                             :: 2, 4, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 4, 2 (16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 54
            CDSs (without protein)            :: 54
            Pseudo Genes (ambiguous residues) :: 0 of 54
            Pseudo Genes (frameshifted)       :: 27 of 54
            Pseudo Genes (incomplete)         :: 27 of 54
            Pseudo Genes (internal stop)      :: 10 of 54
            Pseudo Genes (multiple problems)  :: 10 of 54
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2883
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMD00233528-rid16434743.denovo.187"
                     /strain="K18-6-464"
                     /db_xref="taxon:1280"
                     /geo_loc_name="Japan: Niigata"
     gene            197..2347
                     /locus_tag="O7798_002518"
     CDS             197..2347
                     /locus_tag="O7798_002518"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500775.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA-binding transcriptional accessory protein"
                     /protein_id="HDC2864709.1"
                     /translation="MDNQLINSIIEKYQFSKKQIEAVLTLLEEKNTVPFIARYRKEQT
                     GGLDEVQIKQIDDEYQYMVNLQKRKEEVIKNIEQQGLLTEELKKDILKQNKLQRVEDL
                     YRPFKQKKKTRATEAKRKGLEPLAIWMKARKHEVSIEEKAQQFINEEVQSVEDAIKGA
                     QDIIAEQISDNPKYRTKILKDMYHQGVLTTSKKKNAEDEKGIFEMYYAYSEPIKRIAN
                     HRVLAVNRGEKEKVLSVKFEFDTTSVEDFIARQEINHNNVNRSYILEAIKDSLKRLIV
                     PSIEREIHADLTEKAENHAIDVFSENLRNLLLQPPMKGKQILGVDPAFRTGCKLAVIN
                     PFGTFIAKGVIYPHPPVSKKEAAEKDFVQMVKAYDVQLIAIGNGTASRETEQFVADLI
                     KKHQLPVQFIIVNEAGASVYSASEIARDEFPDFQVEERSAVSIGRRVQDPLSELVKID
                     PKSIGVGQYQHDVNQKALENALTFVVETAVNQVGVDVNTASSSLLQYVSGLSSQIAKN
                     IIAYREENGAIKHNKELSKIKRLGAKTFEQSIGFLRIVDGSEPLDNTSIHPESYKVTY
                     QLLDKLGFGGNDLGSDALKAKLNSLDMDELAIELQVGVPTLEDIIKSLKAPNRDPRDE
                     FETPILKSDVLSIEDLQEGMKLSGTVRNVVDFGAFVDIGVKQDGLVHVSKLSKKFVKN
                     PMDIVSVGDIVDVWIYSIDKNKDKVSLTMIDPHE"
     gene            2340..2795
                     /locus_tag="O7798_002519"
     CDS             2340..2795
                     /locus_tag="O7798_002519"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500774.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SprT family protein"
                     /protein_id="HDC2864710.1"
                     /translation="MNNDKLQRMVENLSEEKFGRTFRHCAYFNKRLRTTGGRYLLKSH
                     DIEINPKQYEHYGEDAVVKIILHELCHYHLHIAGKGYQHKDQDFKRLSQQVGALRFCN
                     SIESYQQRANYEYYCTKCHAKYIRIRKVDTNRMRCGHCNGKLRMKRQLK"
BASE COUNT         1105 a          374 c          564 g          840 t
ORIGIN      
        1 cttagattat gaaatttaga aatgatggtg tgtcattttc aataatctta gtgcgtttta
       61 aaatatagta tgacctaatc attcgtttta aatgttttgg aagtgaaaat tacattaagt
      121 atcatacctt aatagaagta ttttagaata tgttaaaata aatgagtaaa tttaagaaaa
      181 agtgtgggtt aagtaaatgg acaatcaatt gattaattca atcatagaga aatatcaatt
      241 tagtaaaaaa caaattgaag cagtattaac actgctagaa gaaaaaaata cagtaccatt
      301 tattgcgagg tatcgaaaag agcaaactgg tggactagat gaagttcaaa taaagcaaat
      361 tgatgacgaa taccaatata tggtcaattt acaaaaacgt aaagaagaag ttatcaaaaa
      421 tatagaacag caaggattac ttactgagga attaaagaag gatattttaa aacagaacaa
      481 attacaacgt gttgaagacc tatataggcc ttttaaacaa aagaaaaaga caagggcaac
      541 tgaggcgaaa cgtaaagggt tagagccatt agcgatatgg atgaaggcac gtaaacatga
      601 agtctcaatt gaagaaaaag cacaacaatt tataaatgaa gaagtgcaat cggttgaaga
      661 tgctatcaaa ggtgcacaag atattattgc ggaacaaatt tcagataatc ctaaatatag
      721 aacaaaaatt ttaaaagata tgtatcatca aggtgtgtta actacatcta aaaagaaaaa
      781 tgctgaagat gaaaaaggta tttttgaaat gtactatgca tatagtgagc caattaaacg
      841 cattgctaat catagagttt tagctgttaa tcgtggtgaa aaagagaaag tattatctgt
      901 aaagtttgaa ttcgatacga catcagtaga ggatttcatt gcacgtcaag aaatcaatca
      961 taataatgta aatcgcagtt atattttaga ggcgattaaa gatagcttga aacgcttaat
     1021 tgtcccttcg atagagcgtg aaatccatgc tgatttaact gaaaaagctg aaaatcatgc
     1081 aatagatgtt tttagtgaaa acttaagaaa tctattactg caacctccaa tgaaaggtaa
     1141 acaaatatta ggcgtagatc cagcatttag aacaggttgt aaattagcag tcattaaccc
     1201 attcggtact tttatagcaa aaggtgtgat ttatccgcat ccaccagttt ctaaaaaaga
     1261 ggcagcagag aaggattttg tacaaatggt taaagcgtat gatgtgcaat taattgcaat
     1321 tggcaatggt actgcaagtc gtgaaacaga acaatttgtt gcagatttaa ttaaaaagca
     1381 tcagttgcca gtacaattca tcattgtcaa tgaagcgggc gcttcagtat actcagcatc
     1441 agaaattgct agagatgaat ttcctgattt tcaagtggaa gaaagaagtg ccgtatcaat
     1501 tggacgacgc gttcaagatc cattaagtga attagttaaa atcgatccta aatctattgg
     1561 tgtcggacaa taccagcatg atgttaatca aaaagcacta gaaaatgcat taactttcgt
     1621 tgttgaaaca gcagttaacc aagtaggtgt tgatgtcaat acagcatcat catcattatt
     1681 acaatatgtg tctggtctaa gttcgcaaat tgctaaaaat ataattgcat atagagaaga
     1741 aaatggcgca ataaagcata ataaagagtt aagcaagatt aagcgtttgg gtgctaaaac
     1801 ttttgagcag agtataggat ttttaagaat agtagacggt tcagagccat tggataatac
     1861 atcgattcat cccgaaagct ataaagtaac gtatcagtta ttagataaac tcggatttgg
     1921 tggcaatgat ttaggtagtg atgcattaaa agctaaatta aattcattgg atatggatga
     1981 actggcgatt gaattacaag tcggtgtacc tacattagag gatattatta aatccttgaa
     2041 agcacctaat cgagatccaa gggacgagtt tgaaacacca atccttaaat ccgatgtgct
     2101 atcaattgaa gatttacaag aaggaatgaa attgagtggt acagttagaa atgtagtaga
     2161 ttttggagca tttgtagata taggtgttaa acaagatgga cttgtccatg tttcgaaact
     2221 ttctaagaag ttcgtaaaaa atccaatgga tattgtcagt gttggtgata tcgttgacgt
     2281 ttggatttac agtattgaca aaaataaaga caaagtatca ttaacgatga ttgatccaca
     2341 tgaataatga caaacttcag cgaatggttg agaatctttc ggaagaaaaa tttggacgta
     2401 cgtttcgaca ttgtgcatat tttaataaaa ggttacgtac aacaggcgga cgttatcttt
     2461 taaagtccca tgatattgaa attaatccaa aacaatatga gcattatgga gaagatgctg
     2521 ttgtaaaaat tatactgcac gaattgtgtc attatcactt gcatattgct ggtaaaggtt
     2581 atcaacataa agatcaagat tttaaacgat tgagccaaca ggttggagcg cttagatttt
     2641 gtaacagcat tgaaagctat caacaacggg caaattatga atattattgc actaaatgtc
     2701 atgcaaaata tatacgtatc cgtaaagttg atacgaatcg tatgcgttgc ggacattgca
     2761 atggaaaatt aagaatgaaa agacaattga aataagtaca atacaaatag agctaattcg
     2821 tgtatatgta agattattta tgagttgtat ggaatttata tagaatttat cagtgagtta
     2881 ttt
//
LOCUS       DALPQQ010000186         2873 bp    DNA     linear   BCT 22-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus strain K18-6-464
            SAMD00233528-rid16434743.denovo.188, whole genome shotgun sequence.
ACCESSION   DALPQQ010000186 DALPQQ010000000
VERSION     DALPQQ010000186.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMD00233528
            Sequence Read Archive: DRR236061
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 2873)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2873)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001543423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001543423.1
            Genome Coverage       :: 77x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/22/2022 17:09:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,811
            CDSs (total)                      :: 2,743
            Genes (coding)                    :: 2,689
            CDSs (with protein)               :: 2,689
            Genes (RNA)                       :: 68
            rRNAs                             :: 2, 4, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 4, 2 (16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 54
            CDSs (without protein)            :: 54
            Pseudo Genes (ambiguous residues) :: 0 of 54
            Pseudo Genes (frameshifted)       :: 27 of 54
            Pseudo Genes (incomplete)         :: 27 of 54
            Pseudo Genes (internal stop)      :: 10 of 54
            Pseudo Genes (multiple problems)  :: 10 of 54
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2873
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMD00233528-rid16434743.denovo.188"
                     /strain="K18-6-464"
                     /db_xref="taxon:1280"
                     /geo_loc_name="Japan: Niigata"
     gene            complement(<1..661)
                     /locus_tag="O7798_002520"
     CDS             complement(<1..661)
                     /locus_tag="O7798_002520"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498980.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="superantigen-like protein SSL8"
                     /protein_id="HDC2864711.1"
                     /translation="MKFTVIAKAIFILGILTTSVMITENQSVNAKGKYEKMNRLYDTN
                     KLHQYYSGPSYELTNVSGQSQGYYDSNVLLFNQQNQKFQVFLLGKDENKYKEKTHGLD
                     VFAVPELVDLDGRIFSVSGVTKKNVKSIFESLRTPNLLVKKIDDKDGFSIDEFFFIQK
                     EEVSLKELDFKIRKLLIKKYKLYEGSADKGRIVINMKDENKYEIDLSDKLDFERMADV
                     IN"
     gene            complement(1005..1700)
                     /locus_tag="O7798_002521"
     CDS             complement(1005..1700)
                     /locus_tag="O7798_002521"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498979.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="superantigen-like protein SSL7"
                     /protein_id="HDC2864712.1"
                     /translation="MKLKTLAKATLALGLLTTGVITSEGQAVQAKEKQERVQHLYDIK
                     DLHRYYSSESFEFSNISGKVENYNGSNVVRFNQENQNHQLFLLGKDKEKYKEGIEGKD
                     VFVVKELIDPNGRLSTVGGVTKKNNKSSETNTHLFVNKVYGGNLDASIDSFSINKEEV
                     SLKELDFKIRQHLVKNYGLYKGTTKYGKITINLKDGEKQEIDLGDKLQFERMGDVLNS
                     KDINKIEVTLKQI"
     gene            complement(2121..2816)
                     /locus_tag="O7798_002522"
     CDS             complement(2121..2816)
                     /locus_tag="O7798_002522"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498978.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="superantigen-like protein SSL6"
                     /protein_id="HDC2864713.1"
                     /translation="MKLKTLAKATLVLGLLATGVITTESQTVKAAESTQGQHNYKSLK
                     YYYSKPSIELKNLDGLYRQKVTDKGVYVWKDRKDYFVGLLGKDIEKYPQGEHDKQDAF
                     LVIEEETVNGRQYSIGGLSKTNSKEFSKEVDVKVTRKIDESSEKSKDSKFKITKEEIS
                     LKELDFKLRKKLMEEEKLYGAVNNRKGKIVVKMEDDKFYTFELTKKLQPHRMGDTIDG
                     TKIKEINVELEYK"
BASE COUNT          873 a          530 c          303 g         1167 t
ORIGIN      
        1 tattaatgac atctgccata cgctcgaaat ctaatttatc acttaaatca atttcatact
       61 tattttcatc tttcatatta ataacaattc tacctttatc agctgaccct tcatacagtt
      121 tgtatttttt aatcaacagt tttcttattt taaaatcaag ttccttcaat gacacttctt
      181 ccttttgaat aaagaaaaat tcatcaatag aaaaaccgtc tttatcgtct atttttttaa
      241 ctagtaagtt cggcgttctt agagactcaa atattgattt tacgtttttc tttgttacac
      301 cactaacact aaatattctt ccatctaaat ctactaattc tggtaccgca aagacatcta
      361 aaccatgtgt tttttctttg tatttatttt catcttttcc caataaaaac acttggaact
      421 tttgattttg ttggttaaaa agcaaaacgt tagagtcata ataaccttga ctttggccac
      481 taacatttgt taactcataa ctaggtcctg aatagtattg atgtaacttg tttgtatcat
      541 ataaacggtt cattttttca tactttcctt ttgcattaac cgattgattt tctgttatca
      601 ttacacttgt tgttaatatt cctaatataa atatcgcttt agctatcact gtaaatttca
      661 tattcatgtg ctccaatctt aatatattgg attgctttta ttacgtaatt tgaataatac
      721 acctttatta taaagggcat tgagacagac tgacattaac actcgtttaa ttaaacttaa
      781 atcattgtta atgaagagct aattaatatt caatgggcat cactttcaag agcaatgtaa
      841 atttttagta tgctcactca taacctgcgt tataaaacgt aaaaaaaagc ctaacgacaa
      901 ggttgtttta aatacgctcc ttaatgtaag gtgtacgtat ctattcaaca tttcatcgtt
      961 aagctgcttc aaatttatta ctttagagtc attgattact tactttaaat ttgtttcaaa
     1021 gtcacttcaa tcttattaat atccttacta ttcaacacat cacccatgcg ctcgaattgc
     1081 aatttatcac ctaaatcaat ttcttgcttt tctccatctt tcaaattgat agtgatctta
     1141 ccgtatttag tcgtaccttt atataaacca taatttttaa ctaaatgttg tctaattttg
     1201 aaatcaagtt ctttcagtga aacttcttct ttattaattg aaaatgagtc aattgatgca
     1261 tctaaatttc cgccatacac tttattaaca aataaatgtg tattagtttc agaagatttg
     1321 ttatttttct tagtcacacc accaacagta gataatctac cgtttggatc aattaattct
     1381 tttaccacaa agacatcttt gccttcaatg ccttctttat atttctcttt atctttacct
     1441 aataagaata attggtgatt ttgattttct tggttaaagc gtacaacgtt agaaccgtta
     1501 taattttcaa ccttaccact aatattactg aattcaaaac tttctgatga gtagtatcga
     1561 tgtaagtctt taatatcata taaatgttgt actctctctt gcttttcttt tgcttgaact
     1621 gcttggcctt ctgatgtaat cacaccagta gttaataagc ctaatgccaa tgttgcttta
     1681 gctaacgttt ttaatttcac agtactattc tcccaatcta tttataaatt tgtcttaata
     1741 tatttttata tgattaattc aattacgtaa tacgaacaat ctactatcat tatataagtg
     1801 agatactgcg ctatgaatta acctcttttt aactattttt gaaccaacgt taagttagtt
     1861 aatgaaatcc taacagtatt aattattttt tataacacaa tactaatttt ttaactattc
     1921 acactttccc tcaatttaat tatgttttcc acattgtttc atgtcacgaa aaggacaacg
     1981 cgcgactata agtatcaacc gtttttccaa aaacttgatc ataaacccgc tccttttttc
     2041 atcataacaa aataaaaaag aagctaagca atatgttatc gcttaacttc cctacaatta
     2101 ctagtctgct tgtccaaaga ttatttatat tctagctcaa cattaatttc tttgattttg
     2161 gtaccatcta tcgtgtcacc catgcgatgc ggttgtagtt tttttgtaag ttcgaaagta
     2221 taaaacttat catcttccat tttaactaca attttacctt ttctattatt aacagcacca
     2281 tataattttt cttcttccat caattttttt cttaatttaa agtccaactc ttttaacgag
     2341 atttcttctt tagtaatttt aaatttacta tctttagact tttccgatga ttcatcaatt
     2401 tttcttgtta ctttaacatc gacttcttta ctaaattctt tactatttgt cttacttaaa
     2461 ccaccaattg aatattgtct tccattaaca gtttcctcct cgatgactaa aaatgcatct
     2521 tgcttatcat gctcaccttg agggtatttt tcaatatctt taccaagcaa gccaacaaaa
     2581 taatcttttc gatccttcca aacatatact cctttatctg tcactttctg tctatacaaa
     2641 ccatcaagat tttttaactc tatacttggc ttgctatagt agtattttaa cgatttataa
     2701 ttgtgttgac cttgagttga ttctgccgct tttactgttt gactttctgt tgttattaca
     2761 ccagtagcta acaatcccaa tactaatgtt gctttagcta acgtttttaa tttcatagta
     2821 ctattctccc aatctattta taaattttgt cttaatatat ttttatatga tta
//
LOCUS       DALPQQ010000187         2863 bp    DNA     linear   BCT 22-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus strain K18-6-464
            SAMD00233528-rid16434743.denovo.189, whole genome shotgun sequence.
ACCESSION   DALPQQ010000187 DALPQQ010000000
VERSION     DALPQQ010000187.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMD00233528
            Sequence Read Archive: DRR236061
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 2863)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2863)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001543423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001543423.1
            Genome Coverage       :: 77x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/22/2022 17:09:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,811
            CDSs (total)                      :: 2,743
            Genes (coding)                    :: 2,689
            CDSs (with protein)               :: 2,689
            Genes (RNA)                       :: 68
            rRNAs                             :: 2, 4, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 4, 2 (16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 54
            CDSs (without protein)            :: 54
            Pseudo Genes (ambiguous residues) :: 0 of 54
            Pseudo Genes (frameshifted)       :: 27 of 54
            Pseudo Genes (incomplete)         :: 27 of 54
            Pseudo Genes (internal stop)      :: 10 of 54
            Pseudo Genes (multiple problems)  :: 10 of 54
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2863
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMD00233528-rid16434743.denovo.189"
                     /strain="K18-6-464"
                     /db_xref="taxon:1280"
                     /geo_loc_name="Japan: Niigata"
     gene            complement(<1..459)
                     /locus_tag="O7798_002523"
     CDS             complement(<1..459)
                     /locus_tag="O7798_002523"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499939.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDC2864714.1"
                     /translation="MSDRFIKFNDEQLDAKQVMMLQDLARLLLKNEQTQVKIQKFPYY
                     NPVQNVLITSWFWSHRPSHIEMAGLKTDVMLAAYGYHMMDVQIVNEVVQDKTFKHPKF
                     YQQLFKLLEDMRVLNSIKVERPSTAKLIDLRLDTRISYTESQIKVYRTKTQ"
     gene            complement(473..1264)
                     /locus_tag="O7798_002524"
     CDS             complement(473..1264)
                     /locus_tag="O7798_002524"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499940.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MoxR family ATPase"
                     /protein_id="HDC2864715.1"
                     /translation="MALKHYKNSDSTVFNDAKALFDLNKNILLKGPTGSGKTKLAETL
                     SEVVDTPMHQVNCSVDLDTESLLGFKTIKTNAEGQQEIVFVDGPVIKAMKEGHILYID
                     EINMAKPETLPVLNGVLDYRRQITNPYTGEVIKAVPGFNVIAAINEGYVGTLPMNEAL
                     KNRFVVIHVDYIDGDILKNVIKEQSLLQDDKQIEQIIKFNEDLRTMSKQGQISEEAAS
                     IRALLDLCDLITVMPVERAIKRTIIDKLEDEREQQAIYNAVELNF"
     gene            complement(1445..1648)
                     /locus_tag="O7798_002525"
     CDS             complement(1445..1648)
                     /locus_tag="O7798_002525"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499941.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDC2864716.1"
                     /translation="MLHETWKERTPIKKVEVINTDAKKFTVSDMLTVGKQYDVINETE
                     EYYQIIDNSGLVGGYYKTYFKEV"
     gene            complement(1677..2486)
                     /locus_tag="O7798_002526"
     CDS             complement(1677..2486)
                     /locus_tag="O7798_002526"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499942.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HDC2864717.1"
                     /translation="MCGLRSITLGTTNIEQTKHFIVDILGLNYEELLENSIRFGDADI
                     SPGTRLQFIQVPSEQLEESHFVGIGLRTPTDSGLEEYAEILSNKDIPFTTVKELNGNK
                     YFSLEDNNGHIFSIYSNENNYGVGLGMPSFESAVNPLHQVQGLGPVILKVNHVDITGQ
                     ILTNIFGLEVFAEYQPFDNADYHVQVFKVGTGGLGGEIHLMPVETEMTMPEYGAVDQV
                     EFETKDADFFNQAKSRLDEVEIPYQTLEQDDIESIRITENSGLSFIFTLQK"
BASE COUNT          890 a          493 c          395 g         1085 t
ORIGIN      
        1 ttgtgtttta gtacgataca ctttaatttg agattccgta tatgatatac gtgtatctaa
       61 gcgaagatca attaatttag cagtacttgg gcgctcaact ttaatagaat ttaatacgcg
      121 catatcttct aataatttaa aaagttgttg ataaaattta gggtgtttaa aagttttatc
      181 ttgtactact tcatttacaa tttgtacatc catcatatga taaccgtaag cagctaacat
      241 aacatctgtt tttaaaccag ccatttcgat atggcttggt cgatgtgacc aaaaccaact
      301 cgtaatcaaa acattttgaa caggattata gtaagggaat ttttggattt taacttgtgt
      361 ttgttcattt tttaataaga gtcgagctaa gtcttgcaac atcattactt gcttggcatc
      421 taactgttcg tcattaaatt ttatgaaacg atcactcatg ttttatccct ctttaaaagt
      481 ttagttctac agcattatat attgcttgtt gttcacgttc atcttccaat ttatcaataa
      541 ttgtacgttt aattgcacgt tcaactggca ttacagtgat taaatcacac aagtctaata
      601 atgcacggat actagcggct tcttcagaaa tttgtccctg cttagacata gtacgtaaat
      661 cttcattaaa cttaataatt tgttcgattt gtttatcatc ttgtaataaa ctttgctctt
      721 taatcacatt ttttaaaatg tccccatcaa tataatcaac gtgaataaca acaaagcgat
      781 tttttagtgc ttcattcatt ggcaaagtac caacataacc ttcatttatc gctgctataa
      841 cgttaaatcc tggtacagct ttgattactt caccagtgta tggattcgta atttgacgac
      901 gataatctaa gaccccattt aatacaggca atgtttcagg tttagccata tttatttcat
      961 caatatataa aatatgcccc tctttcatag ctttaataac tggaccatct acaaagacaa
     1021 tttcttgttg accttccgca tttgttttaa ttgttttaaa gcctaataag ctttctgtat
     1081 ctaaatcaac agaacaattg acttgatgca tgggtgtatc aacaacttca cttaatgttt
     1141 ctgccaactt tgttttccct gaacctgttg gacctttaag taaaatattt ttatttaaat
     1201 caaataatgc cttcgcatca ttgaaaactg ttgaatctga attcttataa tgttttagtg
     1261 ccattttaaa acgttctcct ttaaataaat taaaaaacta agacatggaa taagttctcc
     1321 aaatgcctta gtttactatt ctattctgat ataaaacgca atgcttagta tgcgaattgt
     1381 ttatatttta ccaaatttac taattgaaaa tctcatatta ggcttcattt caataattat
     1441 gcgtttaaac ttctttgaaa tatgttttat agtaaccgcc aactaatcca gaattatcta
     1501 ttatttgata atattcttca gtttcgttga taacatcata ttgtttgcca accgttaaca
     1561 tgtcagaaac tgtaaatttc tttgcatctg tattaatgac ttctactttc ttgattggtg
     1621 tacgttcttt ccaagtttca tgtaacataa attttgtcct cgctatcgta aaaaaattat
     1681 ttttgtaaag tgaatataaa cgataatcca ctgttttcag taattctaat tgattcaata
     1741 tcatcttgct caagcgtttg atatggtatt tccacttcat ctaagcgcga tttcgcttga
     1801 ttaaagaaat ctgcatcttt cgtttcaaac tcaacttgat cgactgcgcc atattccggc
     1861 attgtcattt cggtttctac aggcattaaa tgtatttcgc cacctagacc acccgttcca
     1921 actttgaata cttggacatg atagtcagca ttgtcgaagg gttggtattc tgcaaatact
     1981 tcaagtccga atatatttgt taaaatttga cctgtaatat ctacatgatt cactttaaga
     2041 atcactggtc ctaaaccttg cacttgatgt aacggattga ccgcactctc aaaagaaggc
     2101 atacctaaac caacgccata attattctcg tttgaatata ttgagaaaat atgaccattg
     2161 ttatcttcga gactgaaata tttattgcca tttaattctt taactgttgt aaatggaata
     2221 tccttattcg ataatatttc cgcatactcc tctaaacctg agtcagttgg tgtacgtaat
     2281 ccaataccca caaagtgaga ttcttctaat tgctcacttg gaacttgtat aaattgaagt
     2341 cttgttcctg ggcttatatc tgcatcgccg aaacgaattg agttttcaag aagttcttca
     2401 taatttaatc ctaatatgtc aactatgaaa tgttttgtct gttctatatt tgttgtacct
     2461 aatgttatac ttctaagtcc acacattata gccacctcta tctttatctt tactattata
     2521 ttataactta ttttaatcat aaattataga atatcggtca gttgattttg attatagatt
     2581 aatatgtgaa aaatgtattt ctttaaaaga actatttcat ttaaataggt aacataatat
     2641 tgttatggtt gctattgagt gtgtcattaa tgaatatctg tatatagcaa ttgaatattt
     2701 cgttttttgt aggacatgaa aaacatatat atgtcgtgtc cataaagcga atttacatca
     2761 tgttcagatg attttaaatt aactaaaggc gcttatagaa ttcatatatt tcatcgtttg
     2821 ttattatcta aaatgcattc attagcatat tgaaacacgc tat
//
LOCUS       DALPQQ010000188         2839 bp    DNA     linear   BCT 22-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus strain K18-6-464
            SAMD00233528-rid16434743.denovo.190, whole genome shotgun sequence.
ACCESSION   DALPQQ010000188 DALPQQ010000000
VERSION     DALPQQ010000188.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMD00233528
            Sequence Read Archive: DRR236061
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 2839)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2839)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001543423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001543423.1
            Genome Coverage       :: 77x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/22/2022 17:09:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,811
            CDSs (total)                      :: 2,743
            Genes (coding)                    :: 2,689
            CDSs (with protein)               :: 2,689
            Genes (RNA)                       :: 68
            rRNAs                             :: 2, 4, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 4, 2 (16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 54
            CDSs (without protein)            :: 54
            Pseudo Genes (ambiguous residues) :: 0 of 54
            Pseudo Genes (frameshifted)       :: 27 of 54
            Pseudo Genes (incomplete)         :: 27 of 54
            Pseudo Genes (internal stop)      :: 10 of 54
            Pseudo Genes (multiple problems)  :: 10 of 54
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2839
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMD00233528-rid16434743.denovo.190"
                     /strain="K18-6-464"
                     /db_xref="taxon:1280"
                     /geo_loc_name="Japan: Niigata"
     gene            306..2456
                     /locus_tag="O7798_002527"
     CDS             306..2456
                     /locus_tag="O7798_002527"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499232.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HDC2864718.1"
                     /translation="MAKSCLHILTNNEYATTRCQDGIVLFWPIDGEIELQKFRKSKII
                     EDDIYIINHLDVFSIKNNKKTIMLYLSSDWFAELGFTFFNYHYTAKLIKSSYNLKCLL
                     LKLTYRYLDNQPLNDADIRKLQDIIKIIAKEASMDKKIAQNQYRYAYYGDLRDELEYI
                     YQNVNQRLTLKSVADKLFVSKSNLSSQFHLLMGMGFKKYIDTLKIGKSIEILLTTDST
                     ISNISEHLGFSSSSTYSKMFKSYMDITPNEYRNLSKYNKCLMLKPEPLVGKMVQEVKE
                     IILNYIEHYKNHLTDVIHIDEDKFETPKLFQTVIQINTYTEMKLVFLEGIFKTLLNKN
                     SQVVFFIMPSILKSKNTMSEEEKFTIIKTIIESDLKIAFNINNIETTYFVEEAFMSVF
                     RQISPNELSNHNNYEVHFVFDLSLMEIRTIYRMILKLHNIMLNVKLGLNITCLFEKPS
                     VFKSLVSQIKRLKFDSLIIDNANLSSPYLMGESDELLLKNILHFKNLKQVINELDIEQ
                     EKLIFLNVENHKLLNNKERDLSNSAPLIYKTLSALYHNFDGFGLNIFDNHQAFNAMHL
                     YDKNGFKTTLGLILEKFIEYVSKPKYENSYYSIFDIENYYCLVIYDWRVIESETIMSN
                     FEDSQVYINFKNNVLNDKYLIVIETLDENSGNINHLISKELRDKYEWNPSLLSKIDNY
                     LKPAIEIKEHNFSDNSLNINVTFNALYIIKIGKK"
     gene            2602..>2839
                     /gene="sarX"
                     /locus_tag="O7798_002528"
     CDS             2602..>2839
                     /gene="sarX"
                     /locus_tag="O7798_002528"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001090984.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HTH-type transcriptional regulator SarX"
                     /protein_id="HDC2864719.1"
                     /translation="MNTEKLETLLGFYKQYKALSEYIDKKYKLSLNDLAVLDLTMKHC
                     KDEKVLMQSFLKTAMDELDLSRTKLLVSIRRLNEK"
BASE COUNT         1137 a          313 c          427 g          962 t
ORIGIN      
        1 taaattgaaa atgaatatat aactaacaaa agataatagt aatacgttgt agatgtggtc
       61 atttaaaatt attttgaaaa tactaaaaag tagtatgttt tcaattggat agtttaatta
      121 aactgactac atctattttt gtaatattta aatgattgat atataagttt aaaaattaac
      181 cattatatag ttttatttat ttttgatttg gtattcgtat tgtgttaaat ttacgtttaa
      241 ttaaataagt taaatattat agggaatgat aaaagtggta cttaaatata gaaagaggta
      301 aagttatggc aaaatcatgc ttgcatatac ttactaataa tgaatatgcg acaacgcgtt
      361 gccaagatgg catagtctta ttttggccaa ttgacgggga aatcgaacta caaaaatttc
      421 gtaaaagtaa aataattgaa gatgatatat atattattaa tcatctggat gtatttagta
      481 ttaagaataa taaaaaaacg atcatgttgt atttgagtag cgattggttt gcggaattag
      541 gctttacttt ctttaattac cactatacag caaagttgat taaatcatcc tataatttga
      601 aatgtctact attaaaattg acatatcgat accttgataa tcagcctctt aatgacgctg
      661 atattagaaa attacaggat attattaaaa tcattgcaaa agaagcaagt atggataaaa
      721 agattgcaca aaatcaatat cgatatgcgt attatggtga tttgcgtgat gagctcgaat
      781 atatttatca aaatgtaaat caacgattga cattaaaaag tgtcgctgat aaattatttg
      841 tctcaaagtc aaatttgtca tcacaattcc acttacttat gggcatgggt tttaaaaaat
      901 atattgatac tttgaaaatt ggtaaatcga ttgaaattct acttactact gatagtacta
      961 ttagcaacat aagtgaacat ttaggtttta gtagtagctc cacttactct aaaatgttta
     1021 aaagttatat ggatataaca ccgaatgaat atcgtaattt atcaaaatat aataaatgtt
     1081 taatgctaaa gccagaacca ctagtaggca aaatggtgca agaagtaaaa gaaatcatat
     1141 tgaattatat tgaacattat aaaaaccacc taactgatgt tatacatatt gatgaagaca
     1201 aatttgaaac acctaaattg tttcaaacgg ttattcaaat aaatacttat acagaaatga
     1261 aattagtttt cttagaagga atctttaaaa ccttattgaa taagaacagt caagttgtct
     1321 ttttcatcat gccatcgatt ctaaaaagta aaaataccat gtccgaagaa gaaaaattca
     1381 caatcattaa aacaataatt gaaagtgatc taaagatagc atttaatata aataatattg
     1441 aaacaactta ttttgttgaa gaagctttta tgagtgtttt cagacaaata tctccaaacg
     1501 aattaagtaa tcataataat tacgaagtgc attttgtttt tgatttatca ttgatggaaa
     1561 ttagaacaat ttatcgaatg atattaaaat tacataacat catgttgaat gtgaaattag
     1621 gattgaacat tacctgttta tttgaaaaac cttcagtttt taaatcacta gtatcacaaa
     1681 taaagcgact taaattcgat tcgttaataa tagataatgc aaatttaagt agcccttatt
     1741 tgatggggga aagtgatgag ttactattga aaaatatttt gcattttaaa aatttaaaac
     1801 aagtaattaa tgaattggat attgaacaag aaaagctgat ttttctaaat gttgaaaatc
     1861 ataaactgct taataataaa gaacgagatc taagtaatag tgctccatta atttataaga
     1921 cattaagtgc gctgtatcac aactttgatg gctttggatt aaacattttt gacaatcatc
     1981 aagcatttaa tgcgatgcat ctatatgaca aaaatggatt taaaacaaca ctaggtctta
     2041 tattagaaaa gtttatcgaa tatgtctcga aaccaaaata cgaaaacagt tattattcta
     2101 tttttgatat agagaattat tattgtcttg ttatttatga ttggcgagtg atagagagcg
     2161 agacaattat gagtaatttt gaggatagtc aagtttatat aaattttaaa aacaatgttt
     2221 taaacgataa atatctaatt gtaatagaaa cattggacga aaatagtggc aacattaatc
     2281 atttgatttc taaagaatta agagataaat atgaatggaa ccctagttta ctatctaaaa
     2341 ttgacaacta ccttaaacca gcaatagaga ttaaagagca taattttagt gataattcct
     2401 tgaatattaa cgttactttt aatgcgttat acataattaa aataggaaaa aaataacacc
     2461 ttgatatgta ttgcaaaatt taatttgcat ttgttggtaa ttttgacaac gtattaaaaa
     2521 caaatgagaa agacaatggc tgaaaaattt aagataataa tgacagaagc attgtcttta
     2581 tatatttggg ggtgcaacat tttgaatact gagaaattag aaacattgct tggcttctat
     2641 aaacaatata aagcattatc tgaatatatt gataaaaaat ataagttgtc gctaaatgat
     2701 ttagcagtct tagatttaac gatgaagcat tgcaaagatg aaaaagtact tatgcaatca
     2761 tttttaaaaa ctgcaatgga tgagctagat ttaagtagga caaaattatt agtttctata
     2821 agaagactaa atgaaaaag
//
LOCUS       DALPQQ010000189         2809 bp    DNA     linear   BCT 22-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus strain K18-6-464
            SAMD00233528-rid16434743.denovo.191, whole genome shotgun sequence.
ACCESSION   DALPQQ010000189 DALPQQ010000000
VERSION     DALPQQ010000189.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMD00233528
            Sequence Read Archive: DRR236061
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 2809)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2809)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001543423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001543423.1
            Genome Coverage       :: 77x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/22/2022 17:09:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,811
            CDSs (total)                      :: 2,743
            Genes (coding)                    :: 2,689
            CDSs (with protein)               :: 2,689
            Genes (RNA)                       :: 68
            rRNAs                             :: 2, 4, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 4, 2 (16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 54
            CDSs (without protein)            :: 54
            Pseudo Genes (ambiguous residues) :: 0 of 54
            Pseudo Genes (frameshifted)       :: 27 of 54
            Pseudo Genes (incomplete)         :: 27 of 54
            Pseudo Genes (internal stop)      :: 10 of 54
            Pseudo Genes (multiple problems)  :: 10 of 54
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2809
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMD00233528-rid16434743.denovo.191"
                     /strain="K18-6-464"
                     /db_xref="taxon:1280"
                     /geo_loc_name="Japan: Niigata"
     gene            392..1090
                     /locus_tag="O7798_002529"
     CDS             392..1090
                     /locus_tag="O7798_002529"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498981.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="superantigen-like protein SSL9"
                     /protein_id="HDC2864720.1"
                     /translation="MKLTTIAKATLALGILTTGVFTAESQTGHAKVELDETQRKYYIN
                     MLHQYYSEESFEPTNISVKSEDYYGSNVLNFKQRNKAFKVFLLGDDKNKYKEKTHGLD
                     VFAVPELIDIKGGIYSVGGITKKNVRSVFGFVSNPSLQVKKVDAKNGFSINELFFIQK
                     EEVSLKELDFKIRKLLIEKYRLYKGTSDKGRIVINMKDEKKHEIDLSEKLSFERMFDV
                     MDSKQIKNIEVNLN"
     gene            1456..2139
                     /locus_tag="O7798_002530"
     CDS             1456..2139
                     /locus_tag="O7798_002530"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498982.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="superantigen-like protein SSL10"
                     /protein_id="HDC2864721.1"
                     /translation="MKFTALAKATLALGILTTGTLTTEVHSGHAKQNQKSVNKHDKEA
                     LYRYYTGKTMEMKNISALKHGKNNLRFKFRGIKIQVLLPGNDKSKFQQRSYEGLDVFF
                     VQEKRDKHDIFYTVGGVIQNNKTSGVVSAPILNISKEKGEDAFVKGYPYYIKKEKITL
                     KELDYKLRKHLIEKYGLYKTISKDGRVKISLKDGSFYNLDLRSKLKFKYMGEVIESKQ
                     IKDIEVNLK"
     gene            complement(2224..2325)
                     /locus_tag="O7798_002531"
     CDS             complement(2224..2325)
                     /locus_tag="O7798_002531"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498983.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDC2864722.1"
                     /translation="MENFDVGGGNFTFMEIGIGFMTHKPKRLNDDID"
     gene            2403..>2809
                     /locus_tag="O7798_002532"
     CDS             2403..>2809
                     /locus_tag="O7798_002532"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000028656.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I restriction-modification system subunit M
                     N-terminal domain-containing protein"
                     /protein_id="HDC2864723.1"
                     /translation="MSITEKQRQQQAELHKKLWSIANDLRGNMDASEFRNYILGLIFY
                     RFLSEKAEQEYADALSGEDITYQEAWADEEYREDLKAELIDQVGYFIEPEDLFSAMIR
                     EIETQDFDIEHLATAIRKVETSTLGEESENDFIG"
BASE COUNT         1134 a          353 c          491 g          831 t
ORIGIN      
        1 aatttgaaat aatcaatgat atatatagaa tgaaagctta agaagcggtt taataatccc
       61 atgtttaatg attttgatac gtgtttttat aataaaaaca tatcgaacat tgactacgtt
      121 attaagctgc ttttttgtac actttataac caatagctta agatttaaaa ctaatcggaa
      181 agaacaatga ttcaccaaaa aaatatttat gttgctatta aaaatcagtt aatacgaatg
      241 ttaaaatacg tttgattttc attaataatg attcaagttt atttaaatga gcgttaatgt
      301 cagtctgttt tgatgcacct tataataaag acagatagtt caaattacgt aataataaca
      361 atccaataca ttaagattgg agcaaaaaaa tatgaaatta acaacgatag ctaaagcaac
      421 attagcatta ggaatattaa ctacaggtgt gtttacagca gaaagtcaaa ctggtcacgc
      481 gaaagtagaa cttgatgaga cacaacgcaa atattatatc aatatgctac atcaatacta
      541 ttctgaagaa agttttgaac caacaaacat tagtgttaaa agcgaagatt actatggctc
      601 taacgtttta aactttaaac aacgaaataa agcttttaaa gtatttttac ttggtgacga
      661 taaaaataaa tataaagaaa aaacacatgg ccttgatgtc tttgcagtac ctgaattaat
      721 agatataaaa ggtggcatat atagcgttgg cggtataaca aagaaaaatg tgagatcagt
      781 gtttggattt gtaagtaatc caagtctaca agttaaaaaa gttgatgcta aaaatggctt
      841 ttcgataaac gagttgtttt ttattcaaaa ggaagaagta tcattgaagg aactggactt
      901 taaaataaga aaactcttaa tcgaaaaata tagattgtat aaaggaacgt ctgataaagg
      961 tagaattgtt atcaatatga aagacgaaaa gaagcatgaa attgatttaa gtgaaaaatt
     1021 aagttttgaa cgtatgtttg atgtaatgga tagtaagcaa attaaaaata ttgaagtgaa
     1081 tttgaattag ttcgagttaa tagcataata gcttaagaag cggcttaacg acaaaatgtg
     1141 aattggcatt tgtgtcctta tataaggaac tgtgttaaat acattactgt tgttaagttg
     1201 tttttgtaat tcaaagagca gaacagagta acatcatcag ttgtagtaaa cgataatccg
     1261 gtaaaacaac taaatgaaat aatgaaagtc atttaacctg aacattaaaa tatatttgtt
     1321 tttcattaag aataattcaa gtatatttaa atcgaggtta attatcgtat gaaacgatgc
     1381 acgttataat aaaaatgtat gattcaaatt acgtaatgaa aacaatccaa tatattaaga
     1441 ttggagcaaa taaatatgaa atttacagca ttagcaaaag cgacattagc tttaggaatt
     1501 ttaacaacag gaactttaac aacagaagtt cattcaggtc atgcaaaaca aaatcaaaag
     1561 tcagtaaata aacatgacaa ggaagcatta taccgatact acactggaaa gactatggaa
     1621 atgaaaaata ttagtgcttt gaaacatggt aaaaacaact tacgttttaa gtttagaggt
     1681 attaagattc aagttttact gcctggaaat gataaaagta aatttcaaca gcgtagttat
     1741 gaggggttag atgttttctt tgttcaagaa aaaagagata agcacgatat attttatact
     1801 gttggtggtg taatacagaa taataaaaca tctggagttg tcagtgcacc aatattaaat
     1861 atttcaaaag aaaagggtga agatgctttt gtgaaaggtt acccttatta cattaaaaaa
     1921 gaaaaaataa cactaaaaga actggattat aagttgagaa agcatctaat tgaaaaatac
     1981 ggactttata aaacaatctc aaaagatggt agggtcaaaa ttagcttgaa agatggcagt
     2041 ttttataacc ttgatttaag atctaaatta aaatttaaat atatggggga agtcatagaa
     2101 agcaaacaaa ttaaagatat tgaagttaac ttaaagtaaa tcattacgaa taattaaaag
     2161 taattgaagc ggcttaacgg tgaaatgtaa attggtgcgc atagcttata caaaaaggat
     2221 gcatcaatcg atatcgtcgt taagccgttt tggtttgtgt gtcatgaatc ctatcccaat
     2281 ctccataaag gtaaaatttc caccaccaac atcaaaattc tccacatcgc aacataacca
     2341 aatgttataa taaatctatt acacaaagag ataaattact tattcaaagg cggaggaatc
     2401 acatgtctat tactgaaaaa caacgtcagc aacaagctga attacataaa aaattatggt
     2461 cgattgcgaa tgatttaaga gggaatatgg atgcgagtga attccgtaat tacattttag
     2521 gcttgatttt ctatcgcttc ttatctgaaa aagcggaaca agaatatgca gatgccttgt
     2581 caggtgaaga catcacgtat caagaagcat gggcagacga agaataccgt gaagacttaa
     2641 aagcagaatt aattgaccaa gtcggttact tcattgagcc agaagattta ttcagtgcga
     2701 tgattcgtga aattgaaacg caagatttcg atatcgaaca cctggcgacg gcaattcgta
     2761 aagttgaaac atcaacatta ggtgaagaaa gtgaaaatga ctttatcgg
//
LOCUS       DALPQQ010000190         2748 bp    DNA     linear   BCT 22-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus strain K18-6-464
            SAMD00233528-rid16434743.denovo.192, whole genome shotgun sequence.
ACCESSION   DALPQQ010000190 DALPQQ010000000
VERSION     DALPQQ010000190.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMD00233528
            Sequence Read Archive: DRR236061
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 2748)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2748)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001543423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001543423.1
            Genome Coverage       :: 77x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/22/2022 17:09:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,811
            CDSs (total)                      :: 2,743
            Genes (coding)                    :: 2,689
            CDSs (with protein)               :: 2,689
            Genes (RNA)                       :: 68
            rRNAs                             :: 2, 4, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 4, 2 (16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 54
            CDSs (without protein)            :: 54
            Pseudo Genes (ambiguous residues) :: 0 of 54
            Pseudo Genes (frameshifted)       :: 27 of 54
            Pseudo Genes (incomplete)         :: 27 of 54
            Pseudo Genes (internal stop)      :: 10 of 54
            Pseudo Genes (multiple problems)  :: 10 of 54
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2748
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMD00233528-rid16434743.denovo.192"
                     /strain="K18-6-464"
                     /db_xref="taxon:1280"
                     /geo_loc_name="Japan: Niigata"
     gene            171..374
                     /locus_tag="O7798_002533"
     CDS             171..374
                     /locus_tag="O7798_002533"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499380.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sterile alpha motif-like domain-containing
                     protein"
                     /protein_id="HDC2864724.1"
                     /translation="MTFYNFIMGFQNDNTPFGILAEHVSEDKAFPRLEERHQVIRAYV
                     MSNYTDHQLIETTNRAISLYMAN"
     gene            complement(371..607)
                     /locus_tag="O7798_002534"
     CDS             complement(371..607)
                     /locus_tag="O7798_002534"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499381.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDC2864725.1"
                     /translation="MDNHNQCNYVNPQNVSLDWECFIISKSEMLLDGVPNELINTWLD
                     KDIITPFSIRNDEINFKTKDIWDALIHHNWYYSN"
     gene            831..1412
                     /locus_tag="O7798_002535"
     CDS             831..1412
                     /locus_tag="O7798_002535"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001140698.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidine phosphatase family protein"
                     /protein_id="HDC2864726.1"
                     /translation="MAKTLYLMRHGQTLFNFKGLIQGFGDSPLTELGIAQAQKARSYY
                     ETKGINFDLYASSTQERASDTLENVAPNQSYQRFKGLKEWHFGIFEGESVYLFDNLYK
                     PEDLFGDRIVPFKGEARQQVEERIVKTLHDIMSQTKNNALVVSHGTIMGVFLRYCLKL
                     DEALKHNIGNCNILKFEYDNGTFKFVELIDPNL"
     gene            complement(1485..2102)
                     /locus_tag="O7798_002536"
     CDS             complement(1485..2102)
                     /locus_tag="O7798_002536"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499383.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid transporter"
                     /protein_id="HDC2864727.1"
                     /translation="MVTAIIHGFILAIGLILPLGAQNVFIFNQGANQPKYRYVLPAII
                     TAGLSDSLLIIIAVVGVSIIIMSLPVLQAIIYIVGLIFLMYMAWTIWHDKPSTDGETQ
                     IMSPMKQVSFALSVSLLNPHAILDTIGVIGSSAALYSGSNKIAFTIACISVSWLWFFL
                     LAILGKMVGSIDKTGKLLTIINKISSIIIIIVALMILQKLIQLLF"
     gene            complement(2257..2748)
                     /locus_tag="O7798_002537"
     CDS             complement(2257..2748)
                     /locus_tag="O7798_002537"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000695603.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HDC2864728.1"
                     /translation="MEIKTLTNNDFNEYKRLVSTVNEEFTQDSHYSQTMTDTLIHDIL
                     NQGSPKCIVFGCYENETLIATAALEQIRYVGKEHKSLIKYNFVTNNDKSINSELINFI
                     INYARQNNYESLLTSIVSNNIGAKVFYSALGFDILGFEKNAIKIGNTYFDEHWLFYDL
                     INK"
BASE COUNT          995 a          410 c          413 g          930 t
ORIGIN      
        1 aatatttaca tactaaaaac tcttaaagtt gtataattcg ttaatatttt tagaatcaga
       61 tatcaaaaaa atgtgcaaaa tcacttttgc acatttacaa atactagttt tctgataaga
      121 ttaataataa cactttaaat agcgcttaat aaatgaaggg ggcaagtctt atgacgtttt
      181 acaatttcat catgggtttt caaaatgata acacaccatt tggtatattg gccgaacacg
      241 ttagtgaaga taaagcattc cctcgattag aagaaagaca ccaagtaatt agagcatatg
      301 tgatgtctaa ttacacagat catcaattaa ttgaaactac aaatagagct attagcttat
      361 atatggcaaa ttaatttgag tagtaccaat tatgatgtat tagtgcatcc caaatatctt
      421 ttgttttaaa gtttatttca tcatttctta tcgaaaatgg tgtaataatg tctttatcta
      481 accaagtgtt gataagttca tttggtacac catctaacaa catttcactt ttactaatta
      541 taaaacattc ccagtcaagt gaaacatttt gtggattcac ataattacat tgattatgat
      601 tatccataaa cactcactcc tttaaaattc tgtactcttc attgcgtttt accccgtcac
      661 attatctttt aaactaaaat catcattact tatgaaaaaa tgtacatcaa aagcaaaggt
      721 tttcgctacc gaaaaagttt aaataatggt ttaatatatt tggtactcat tttaataaaa
      781 agagaataca ttttgagcta tcaatacttt ttattgaaga ggtgttattg ttggctaaaa
      841 cgttatattt aatgcgccac ggacaaactt tgtttaattt taagggacta attcagggat
      901 ttggagattc gccgctaaca gaacttggaa ttgctcaagc tcaaaaggca cgtagttatt
      961 atgaaactaa ggggataaac ttcgatttat atgcatcatc aacgcaagaa cgcgcaagtg
     1021 acacacttga aaatgttgca cctaaccaat cgtatcaacg ttttaaggga ctgaaggaat
     1081 ggcattttgg aatatttgaa ggtgagtcag tctatctatt tgataatcta tacaagcctg
     1141 aggacttatt cggagatcga attgttcctt tcaaaggaga ggcaaggcaa caagttgaag
     1201 aacgcattgt gaaaacttta catgacatta tgtctcaaac aaagaataat gcattagtcg
     1261 tgagtcatgg aacaataatg ggagtatttt taagatattg ccttaaacta gatgaagcat
     1321 taaagcataa tatcggtaat tgtaatatcc tgaaatttga atatgacaat ggaacattta
     1381 aatttgttga gttaattgat ccaaatttat aataaataaa gcgttataca tagacacaag
     1441 tatgtctttt gtataacgct tttaaaatac aactacataa cgctttagaa taataattga
     1501 ataagttttt gtaatatcat cagagcaaca ataataatta ttatgcttga tattttattg
     1561 attattgtta ataattttcc ggttttatca attgatccaa ccatttttcc taaaattgcg
     1621 agtaaaaaga accataacca tgaaacgcta atacaagcga ttgtaaacgc aattttattg
     1681 ctgccactat ataatgcagc actactacca attactccaa ttgtatctaa aatagcatgt
     1741 ggattgagta atgaaactga taaagcaaaa cttacttgtt tcattggaga cataatttga
     1801 gtttctccat ctgttgaggg tttatcatgc caaatggtcc aagccatata catcaagaaa
     1861 attaaaccaa ctatataaat aattgcttga agtacaggta aagacataat aatgatagat
     1921 actcctacca ctgcaataat aataagtaag ctgtctgaca acccggctgt aattattgca
     1981 ggcaatacat atctatattt tggttgatta gctccttggt taaaaataaa tacattttgt
     2041 gcacctaaag gtaaaattag accaatcgct aagataaatc catgaataat tgcggttacc
     2101 attaagtttt gacaccccta aaacatagaa tattctgaaa aaacttattg ttatcatatc
     2161 aaataaaaaa caactactca atagtagagt agttgtatga aaaatagaac ctatatgatt
     2221 tgaatttatg agaaatgtag aatatataaa actgtattac ttattaatca aatcataaaa
     2281 aagccaatgt tcatcgaaat aggtatttcc gattttaatt gcatttttct caaaaccaag
     2341 aatgtcgaat cctagtgcac tatagaaaac tttagcacct atgttgtttg acacaattga
     2401 tgtaagtaaa gattcgtaat tgttctgccg tgcataatta ataatgaaat taatgagctc
     2461 gctattaatc gatttatcgt tattagtaac aaagttgtat ttaattaatg atttatgttc
     2521 ttttccaacg tatcgaattt gttctaaggc agctgttgcg ataagtgttt cgttttcata
     2581 acagccaaat acaatacatt tcggtgaacc ttgatttaaa atgtcatgta ttaaggtgtc
     2641 agtcattgtt tgactataat gtgaatcttg agtgaattct tcattgactg tcgaaacaag
     2701 tctcttatac tcattaaaat cattattcgt taatgtttta atttcaat
//
LOCUS       DALPQQ010000191         2714 bp    DNA     linear   BCT 22-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus strain K18-6-464
            SAMD00233528-rid16434743.denovo.193, whole genome shotgun sequence.
ACCESSION   DALPQQ010000191 DALPQQ010000000
VERSION     DALPQQ010000191.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMD00233528
            Sequence Read Archive: DRR236061
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 2714)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2714)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001543423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001543423.1
            Genome Coverage       :: 77x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/22/2022 17:09:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,811
            CDSs (total)                      :: 2,743
            Genes (coding)                    :: 2,689
            CDSs (with protein)               :: 2,689
            Genes (RNA)                       :: 68
            rRNAs                             :: 2, 4, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 4, 2 (16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 54
            CDSs (without protein)            :: 54
            Pseudo Genes (ambiguous residues) :: 0 of 54
            Pseudo Genes (frameshifted)       :: 27 of 54
            Pseudo Genes (incomplete)         :: 27 of 54
            Pseudo Genes (internal stop)      :: 10 of 54
            Pseudo Genes (multiple problems)  :: 10 of 54
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2714
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMD00233528-rid16434743.denovo.193"
                     /strain="K18-6-464"
                     /db_xref="taxon:1280"
                     /geo_loc_name="Japan: Niigata"
     gene            complement(1..1180)
                     /locus_tag="O7798_002538"
                     /pseudo
     CDS             complement(1..1180)
                     /locus_tag="O7798_002538"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002500317.1"
                     /note="frameshifted; incomplete; missing C-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            complement(1185..1550)
                     /locus_tag="O7798_002539"
     CDS             complement(1185..1550)
                     /locus_tag="O7798_002539"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000410574.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HDC2864729.1"
                     /translation="MEKFNRQEQLKQLHAERKVKTEKKVDKAINDLVQKNKAINFNIV
                     SKHSKVSKATLYKNNKIRKKIEKLREQNREIFVHKNKNDGKDALISSLKRKVNSLEKE
                     KKMLKEEISVLYSRLYEDI"
     gene            complement(1559..>2714)
                     /locus_tag="O7798_002540"
     CDS             complement(1559..>2714)
                     /locus_tag="O7798_002540"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000026849.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="tyrosine-type recombinase/integrase"
                     /protein_id="HDC2864730.1"
                     /translation="REELKTIRRFLNDIITQNYAIAPYQDIRFLIYPQDLPKHEKKNS
                     SQIDYIPDFVLEQLFEHINDLHKDLIPVVWIAFKTGLRISDVLTLQNNCLAKVNGKYS
                     IITDIAKTFVKGHRIPIDNKLADIIAVLIADSKSKSTKDNNPNNYIFAIYKGKRKGMP
                     FTQHMVRAHLNHLSKTKNIIDEQGEIFHFKTHQFRHTYAVKLLNGGADILTIQELLAH
                     SSPEMTLRYAKLLDDTKRKAFESVIDQGAFSFDVDGKIKNIQHSSELSEKALNSLWQE
                     HKLNAMDNPYGTCHARLSGDCPYMEAPPCLTCNSGKPCKDLAIGFSDLDVEKYELHIK
                     STVKSIELAKNNNRQDMVEKHINILNKYEEILGNIKDGNIIFGRSNRIKV"
BASE COUNT          851 a          417 c          306 g         1140 t
ORIGIN      
        1 aattcttctt tgtttaattc ttcaatatat tgtggagatt taaaatcatt attattcttt
       61 agatacaaat ataaatataa actaggtaaa agctctgttc tataaataat tgcaatagat
      121 ctcttgaaat ttagtatcca ttgtctaaaa tatagggctt ctttttttcc atttaaatta
      181 tattgttgaa acccatacaa ttgtaattca tttaacatag tttctaagaa aaagaaatta
      241 gcagaactat tgaaataaag tgccatttta gaacattgtt ctaaaacatc tccttcttgc
      301 tcatccatcc aaactacaaa aacagatgct ttattcaaga agtttatata attatcgcta
      361 taaccatctt gcctaaagtg tttacttttt ccttcaaatg aaaaaatagg cgcatttact
      421 aaccactctt gaatcttcac gtcctcatag aaaggatcat cagtaaattc attttcatta
      481 gctaaataat aaacttcaaa acccatattt ttagatactt tatattcaaa aatatcctta
      541 ctattaattt ttataattct attaatttgc ctagaaacat ctctaatatt tttacaatgt
      601 ctattaccat acaattgata ctgtctttgt ctattatttt tttcttgatt aattagagga
      661 tatatcttat cttttacaca tgagaaagta ctatacaagt cgcttccaaa gtttatactc
      721 tctaagtctt caatgatttc tataacaaat gtaccattgt taaatatagt taaggttaaa
      781 aaaataaatt caaagtgttc tcatgagtaa tttcaatatg tggagtgaat atatattttt
      841 tatatttgta tccatgtata ttattttgat caaacaatcc atcattaata tttgcattag
      901 tagcaaattt ttctaaaaat ttttctagtt tttcgtgata ttcttttgta tgtcttttat
      961 atcttccagg taaaatccaa taatcataat ttaccggggg attgtcagga gataaaatgc
     1021 gtataactcc ttttacattc aatagaattt cctcaatttt ttcaaaccaa gggttcatgt
     1081 tattatcttt tatatttata gcagtagcat attgatatgt tactttatag ccttgtaatt
     1141 tattaatatc ttcaagaatc ttttcaattt tattgtccat tattttaaat atcctcatat
     1201 agcctagaat ataaaacgct aatttcttct ttcaacattt ttttctcttt ttctaaagaa
     1261 tttacttttc tttttaaaga ggagattaac gcatctttac cgtcattttt atttttatga
     1321 acaaatattt ctctgttttg ttcacgtaac ttctctattt tctttcgaat tttattattt
     1381 ttatataatg tagctttcga aacttttgaa tgtttagaaa cgatgttaaa gttaattgct
     1441 ttattttttt gaactaaatc atttattgct ttatcaactt ttttctcggt tttaactttt
     1501 cgttctgcat gcaactgttt taattgttct tgtctattaa atttttccat cttaacctct
     1561 atacttttat tctattactt ctcccgaata taatgtttcc atcttttata ttacctagta
     1621 tttcttcata tttatttaat atatttatat gcttttcaac catatcttgt ctattattat
     1681 ttttagctaa ttctatagat ttgaccgttg atttgatatg taattcatat ttttcaacat
     1741 ctaaatcaga aaatccaata gctaaatcct tacatggttt cccagaatta caagtcaggc
     1801 atggcggagc ttccatgtat gggcaatcac cactcaatct agcatgacaa gtgccataag
     1861 gattgtccat tgcgtttaat ttatgttctt gccataaaga attcaatgct ttttcagata
     1921 gttcactact atgctgtata tttttaattt taccgtcaac atcaaaacta aaagctcctt
     1981 gatcaataac tgattcaaaa gcctttcttt ttgtatcatc aagtaactta gcatatctta
     2041 gagtcatttc tggtgaggag tgtgctaata attcttgtat cgttaatata tctgctccac
     2101 catttaacaa ttttactgca taggtatgtc taaattgatg agttttgaaa tggaagattt
     2161 ctccttgttc atcaataata tttttagtct ttgataaatg atttaagtgt gctctgacca
     2221 tatgttgtgt aaagggcatt ccctttcttt ttcctttata aatagcaaaa atataattat
     2281 taggattatt atcttttgta cttttacttt tagaatcggc tattaaaact gctattatat
     2341 cagctaattt attatcaatt ggtattctat gtcctttaac aaaagtttta gcaatatctg
     2401 tgattattga atactttcca ttaacttttg caaggcaatt attttgtaat gtcaatacat
     2461 cagaaattct taatcctgtt ttaaaagcta tccaaactac aggtattaaa tctttatgca
     2521 aatcatttat atgctcaaaa agctgttcca atacaaaatc tgggatataa tcaatttggc
     2581 tactattttt cttttcgtgt ttaggtaagt cttgaggata aattaaaaat cgtatatctt
     2641 ggtacggtgc tatagcatag ttttgagtta taatatcgtt taagaacctt ctaattgttt
     2701 ttaattcttc tctc
//
LOCUS       DALPQQ010000192         2633 bp    DNA     linear   BCT 22-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus strain K18-6-464
            SAMD00233528-rid16434743.denovo.194, whole genome shotgun sequence.
ACCESSION   DALPQQ010000192 DALPQQ010000000
VERSION     DALPQQ010000192.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMD00233528
            Sequence Read Archive: DRR236061
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 2633)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2633)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001543423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001543423.1
            Genome Coverage       :: 77x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/22/2022 17:09:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,811
            CDSs (total)                      :: 2,743
            Genes (coding)                    :: 2,689
            CDSs (with protein)               :: 2,689
            Genes (RNA)                       :: 68
            rRNAs                             :: 2, 4, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 4, 2 (16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 54
            CDSs (without protein)            :: 54
            Pseudo Genes (ambiguous residues) :: 0 of 54
            Pseudo Genes (frameshifted)       :: 27 of 54
            Pseudo Genes (incomplete)         :: 27 of 54
            Pseudo Genes (internal stop)      :: 10 of 54
            Pseudo Genes (multiple problems)  :: 10 of 54
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2633
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMD00233528-rid16434743.denovo.194"
                     /strain="K18-6-464"
                     /db_xref="taxon:1280"
                     /geo_loc_name="Japan: Niigata"
     gene            <1..790
                     /locus_tag="O7798_002541"
     CDS             <1..790
                     /locus_tag="O7798_002541"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499398.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="MetQ/NlpA family ABC transporter
                     substrate-binding protein"
                     /protein_id="HDC2864731.1"
                     /translation="TFAVVLAACGNGNKSGSDDKKITVGASPAPHAEILEKAKPLLEK
                     KGYELDIKTINDYTTPNKLLDKGEIDANYFQHTPYLNTEKKDKGYKIVSAGDVHLEPM
                     AVYSKKYKSLKELPKGATVYVSNNPAEQGRFLKFFVDAGLIKIKKGVKIEDAKFSDIT
                     ENKKDIKFNNKQSAEFLPKIYQNEDADAVIINSNFAIEQKLNPKKDSIAVESAKDNPY
                     ANLIAVKEGHQDDKKIKALIEVLQSKDIQDFINEKYNGAVIPAK"
     gene            1144..1338
                     /locus_tag="O7798_002542"
     CDS             1144..1338
                     /locus_tag="O7798_002542"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499399.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CsbD family protein"
                     /protein_id="HDC2864732.1"
                     /translation="MADESKFEQAKGNVKETVGNVTDNKNLENEGKEDKASGKAKEFV
                     ENAKEKATDFIDKVKGNKGE"
     gene            complement(1571..2422)
                     /locus_tag="O7798_002543"
     CDS             complement(1571..2422)
                     /locus_tag="O7798_002543"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499400.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF368 domain-containing protein"
                     /protein_id="HDC2864733.1"
                     /translation="MQQFKWINILKGFAMGTSDLVPGVSGGTIALLLGIYNQFIASIS
                     GIFSRRFWPSFTFLIPIIIGMLLAMGSLSNLFNYLLSQHHIPTMFFFGGLIIGIVPYL
                     LKISNYKTSFTTKHYMMVIAGIAILIVITLMNNGDKHAGETLTLSTSLIIKYFIAGMC
                     ASSAMLLPGISGSFMLLVFGVYGTVMLAISEVVKLNFAGLPILLAVGFGVLAGFIISS
                     KIIQYFLTHHKLMTFALIIGFVVGSLFAVFPGLPTNIVMWFVSLVVFIIGFIVSLTLG
                     RITAENE"
BASE COUNT         1059 a          380 c          411 g          783 t
ORIGIN      
        1 aacatttgca gttgtattag cagcttgcgg taatggaaac aaaagtggca gtgacgacaa
       61 gaaaataaca gtaggtgctt caccagcacc acatgctgaa attttagaaa aagcaaaacc
      121 attattagag aaaaaaggtt atgaactaga tattaaaaca attaacgatt acactacacc
      181 taataaatta ctagacaaag gtgaaattga cgcaaactat ttccaacata caccatattt
      241 aaacacagag aaaaaggata aaggttacaa aatcgtaagt gccggtgatg ttcacttaga
      301 acctatggct gtatactcta aaaagtataa aagtttaaaa gaattaccaa aaggtgcaac
      361 agtctatgtg tctaataatc cagctgaaca aggacgtttc ttaaaattct tcgttgatgc
      421 aggtttaatt aaaatcaaaa aaggcgtaaa aattgaagat gctaagttta gtgatattac
      481 agagaataaa aaagatatta agtttaataa taaacaatca gcagaattct tacctaaaat
      541 ttatcaaaat gaagacgctg atgctgttat cattaattcg aactttgcaa tcgaacaaaa
      601 actaaatcct aaaaaagatt ctattgctgt agaaagtgcg aaagataatc cttatgcaaa
      661 cttaattgct gttaaagaag gacatcaaga tgataagaaa atcaaagcat taattgaagt
      721 attacaatct aaagatattc aagacttcat taatgaaaaa tacaatggtg cagttattcc
      781 tgctaaataa atcatattaa tggctcagta acgtgatgtt gctgggcttt ttaatttaaa
      841 caggtattta tatgatattt aggaatgaga tgctattacg gataaagtaa aatcctatat
      901 gcatgcgtgc tactcattta ttcttatttt taatttcaca tggctagtga ctaatacatc
      961 ataaatcatt agtgattctt tattatttca gtcccactcc ctcaagttaa tgatgaatct
     1021 atttcgctag ttataaaatg acgtcaaatc aatatcaaaa attatttaag taaaatgttt
     1081 agataatttt tcagtgggta agtattatat ataacattta attattccga ggaggcattt
     1141 attatggcag acgaaagtaa atttgaacaa gcaaaaggta atgttaaaga aacagtaggt
     1201 aatgttactg ataataaaaa tttagaaaac gaaggtaaag aagataaagc ttctggtaaa
     1261 gcgaaagaat tcgttgaaaa tgcaaaagaa aaagcaactg attttattga taaagtaaaa
     1321 ggtaacaaag gcgagtaatt ttacttttta ttcctaatac actgcacatg ccacttagtc
     1381 ggtataacca tcggctaggt ggtttttgta ttaaaaaagt ggataccaaa atttattaat
     1441 aattatttta atgttagaaa aaaactaaat aaaaactcgc taatgatatc caataatatg
     1501 tatacaaaac gagacatata ttgcatatga ttaacgagat actgaaaata ttttatcacc
     1561 cctaaaatga ttattcattt tcagcggtaa ttcgacctaa agtcaaactt acaataaaac
     1621 cgatgataaa tactactaat gaaacgaacc acatcacgat attagttggt aaacctggaa
     1681 atactgcaaa gagggagcca acaacaaaac caatgattaa tgcaaaagtc attagtttat
     1741 gatgtgttag gaaatactgg ataattttgc ttgaaataat gaatccagca agcacgccaa
     1801 atccgactgc aagtaatata ggaagacctg caaagttaag tttaacaact tcagatattg
     1861 ctagcatgac cgtaccatag acgccaaata ctaataacat aaatgaccct gaaatacctg
     1921 ggagtaacat agcactagat gcacacatac ctgcaataaa atatttaata ataagactag
     1981 ttgatagagt aagtgtttct ccagcatgtt tatcaccatt attcattaat gtaataacaa
     2041 ttaagatagc gataccagct ataaccatca tgtaatgttt agttgtaaat gacgttttat
     2101 agttagaaat tttcaataaa tatggaacga taccaatgat taatccacca aagaaaaaca
     2161 tagttggaat atggtgttgg cttaataaat aattaaaaag attacttagt gatcccattg
     2221 ccagtaacat tccaattata atggggatta aaaatgtaaa acttggccaa aaacgtcgtg
     2281 agaatatgcc gctaattgaa gcgataaatt gattgtaaat acctaacaat aatgcgatag
     2341 tcccaccgct aacaccaggt accaagtcac tcgttcccat agcaaaacct tttagaatat
     2401 taatccattt aaattgttgc atgaataact cctttcaaac gattggaata aaatcataaa
     2461 tagcatcata ccatattaca aatgtcctag tgaaatgata acatatttta aattcataaa
     2521 atccattgag aaattatgtg cacttattat catttatatt tttaaagaga gcggattaga
     2581 gttgtacttt agagttatta aaaataataa aaagggttta agttgtttat att
//
LOCUS       DALPQQ010000193         2633 bp    DNA     linear   BCT 22-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus strain K18-6-464
            SAMD00233528-rid16434743.denovo.195, whole genome shotgun sequence.
ACCESSION   DALPQQ010000193 DALPQQ010000000
VERSION     DALPQQ010000193.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMD00233528
            Sequence Read Archive: DRR236061
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 2633)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2633)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001543423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001543423.1
            Genome Coverage       :: 77x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/22/2022 17:09:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,811
            CDSs (total)                      :: 2,743
            Genes (coding)                    :: 2,689
            CDSs (with protein)               :: 2,689
            Genes (RNA)                       :: 68
            rRNAs                             :: 2, 4, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 4, 2 (16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 54
            CDSs (without protein)            :: 54
            Pseudo Genes (ambiguous residues) :: 0 of 54
            Pseudo Genes (frameshifted)       :: 27 of 54
            Pseudo Genes (incomplete)         :: 27 of 54
            Pseudo Genes (internal stop)      :: 10 of 54
            Pseudo Genes (multiple problems)  :: 10 of 54
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2633
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMD00233528-rid16434743.denovo.195"
                     /strain="K18-6-464"
                     /db_xref="taxon:1280"
                     /geo_loc_name="Japan: Niigata"
     gene            102..1466
                     /gene="radA"
                     /locus_tag="O7798_002544"
     CDS             102..1466
                     /gene="radA"
                     /locus_tag="O7798_002544"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499080.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA repair protein RadA"
                     /protein_id="HDC2864734.1"
                     /translation="MAKKKVIFECMACGYQSPKWMGKCPNCGAWNQMEEIVEKAANPK
                     HGVKTKELAGKVQKLNSIKHETTPRVLTDSAEFNRVLGGGIVSGSLVLIGGDPGIGKS
                     TLLLQICASLSQKKKVLYITGEESLSQTKLRAERLDEDSSELQVLAETDLEVIYQTVK
                     EEQPDLLVVDSIQTIYHPEISSAPGSVSQVRESTQSLMNIAKQMNIATFIVGHVTKEG
                     QIAGPRLLEHMVDTVLYFEGDEHHAYRILRAVKNRFGSTNEMGIFEMKQSGLKGVNNP
                     SEMFLEERSTNVPGSTIVATMEGTRPLLIEVQALVTPTTFNNPRRMATGIDHNRLSLL
                     MAVLEKKENYLLQQQDAYIKVAGGVKLTEPAVDLSVIVATASSFKDKAVDGLDCYIGE
                     VGLTGEVRRVSRIEQRVQEAAKLGFKRVIIPKNNIGGWTYPEGIQVIGVTTVHEVLSF
                     ALHS"
     gene            1491..2564
                     /locus_tag="O7798_002545"
     CDS             1491..2564
                     /locus_tag="O7798_002545"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017328539.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PIN/TRAM domain-containing protein"
                     /protein_id="HDC2864735.1"
                     /translation="MNIVKLMVIIIYLIIGSALGIIIIPEIANDLGLQNSSFLKNHYV
                     DGIIGSIFMFLIFGVFIRRVTNAIKGLEHFIMRRSAVEILFATIGLIIGLLISVMVSF
                     ILESIGNSIFNHFIPVIITILLCYFGFQFGLKKRDEMLMFLPENIARSMSQHTKSATP
                     KIIDTSAIIDGRILEVIRCGFIDGNILIPQGVINELQIVADSNDSVKREKGKRGLDIL
                     NELYDLDYPTKVIHPTKTHSDIDTMLLKLAKQYHASIITTDFNLNKVCHVHGIKALNV
                     NDLSEAIKPNVHQGDQLHILLTKMGKEPGQAVGYLDDGTMVVVDNAKNLIGSHVNLEV
                     VSLLQTSSGRIVFAKKIEDTVSL"
BASE COUNT          928 a          360 c          526 g          819 t
ORIGIN      
        1 agtcatgtta aaatacaaac aaatgtaact cacatttaat ttgtcataat gggaatgtgc
       61 gtttaaaata gatttgttca aaggaaagtg gaggtgcaat tttggccaag aaaaaagtga
      121 tttttgaatg tatggcttgt ggttatcaat ctcctaaatg gatggggaaa tgtcctaatt
      181 gtggcgcttg gaatcaaatg gaggaaattg ttgaaaaagc agccaatcct aaacatggag
      241 ttaaaaccaa ggaattagca ggtaaagtac aaaaattaaa tagtattaaa catgaaacaa
      301 cgccgagagt gttaacagat tcagcagaat tcaaccgtgt attaggtgga ggtattgtga
      361 gcggatcgtt agtacttatt ggtggggatc caggtattgg taagtcaacg ttacttttac
      421 aaatttgtgc atcgttatct caaaagaaaa aagtactata tattactgga gaagaatcgc
      481 ttagtcagac taaattacgt gcagagcgat tagatgaaga ttcaagtgaa ttgcaagtat
      541 tagctgaaac agatcttgaa gttatttatc aaacagtaaa agaagaacaa cctgatttat
      601 tagtagtgga ttcgattcaa acaatatatc atcctgaaat cagctctgcg ccaggttctg
      661 tttcacaagt tcgtgaaagt acacaaagtt taatgaatat tgctaaacaa atgaacattg
      721 caacttttat agtgggtcat gtaacgaaag aaggtcaaat tgctggccca agattgctag
      781 aacacatggt tgatactgtg ctttattttg aaggcgatga acaccacgca tatcgaattt
      841 tgcgagctgt taaaaaccgt tttggttcaa ctaatgaaat gggaatcttc gaaatgaagc
      901 aaagtggatt aaaaggtgta aataatccat ctgaaatgtt tttagaagaa cgttcaacaa
      961 atgttccagg ttcaacaatt gttgcaacca tggagggaac cagaccactt ttaatagaag
     1021 ttcaagcgct ggtaactcca acgactttta acaatccgag acgaatggca acagggattg
     1081 atcataatcg attaagtttg ttgatggctg ttttggaaaa gaaagaaaat tatctattac
     1141 aacaacaaga tgcttatatc aaagtagctg gcggtgtaaa gttaacggag ccagcagttg
     1201 atttaagtgt aattgtagca actgcatcta gctttaaaga taaagctgtc gacggattag
     1261 attgctatat tggagaagtt ggtttaacgg gtgaggtacg tcgtgtatct cggatagaac
     1321 aacgcgtgca agaggctgca aaactaggtt tcaaacgtgt aattattcct aaaaataata
     1381 taggcggatg gacatatcct gaaggtatac aagtaatagg tgtaactact gtacatgaag
     1441 tattgtcatt tgctcttcat tcataaaaca tcaagaaagg aggacattgt gtgaatatcg
     1501 ttaaactaat ggttattatt atttacttaa ttattgggag cgcattagga ataattatta
     1561 ttcctgaaat tgcaaatgat cttggattac aaaactccag ctttttaaaa aatcactatg
     1621 tagatggcat tatcggtagt atttttatgt tcttaatttt tggtgtattt attagacgag
     1681 ttactaacgc tataaaaggt ttagaacatt ttattatgcg tagaagtgct gttgaaatac
     1741 tattcgcaac aataggttta ataatcggat tacttatttc tgttatggtg tcgtttatat
     1801 tagaatcaat tggcaactct atttttaatc atttcattcc tgtcataatt acgatattac
     1861 tatgttattt cggtttccaa tttggcctta aaaaacgaga tgaaatgtta atgtttttac
     1921 ctgagaatat agcgcgttcc atgtcacaac atactaaaag tgctacgcca aaaattatcg
     1981 acacaagcgc aattattgat ggtcgtattt tagaagtcat tcgttgcggt tttatcgatg
     2041 gcaatatttt aattccacaa ggtgttatta atgaattaca aattgttgca gattcaaatg
     2101 acagtgttaa acgtgaaaag ggtaaaagag gcttagatat tttaaatgaa ttgtatgatt
     2161 tagactatcc tacaaaggtt atacatccaa ctaaaacaca tagtgatatt gatacgatgt
     2221 tattaaaatt agcaaaacaa tatcatgcaa gtattataac gacagatttc aacctaaata
     2281 aagtttgtca tgtacatggt atcaaagcat taaatgttaa tgatttatca gaagcaatca
     2341 aacctaatgt acatcaaggt gatcaactgc atattttact gacaaaaatg ggtaaggagc
     2401 ctggtcaggc agtaggatat ctagatgatg gtacgatggt agttgttgat aatgctaaaa
     2461 atcttattgg cagtcatgtc aatttagaag tagtcagctt attgcaaaca tcttcaggaa
     2521 gaattgtttt tgctaaaaaa atcgaagata cagtatcatt ataaaaactg tagttgacga
     2581 aaacaaaata gatattaaaa ggtatatgaa atggcgaagt ttgtaatttg aag
//
LOCUS       DALPQQ010000194         2621 bp    DNA     linear   BCT 22-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus strain K18-6-464
            SAMD00233528-rid16434743.denovo.196, whole genome shotgun sequence.
ACCESSION   DALPQQ010000194 DALPQQ010000000
VERSION     DALPQQ010000194.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMD00233528
            Sequence Read Archive: DRR236061
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 2621)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2621)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001543423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001543423.1
            Genome Coverage       :: 77x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/22/2022 17:09:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,811
            CDSs (total)                      :: 2,743
            Genes (coding)                    :: 2,689
            CDSs (with protein)               :: 2,689
            Genes (RNA)                       :: 68
            rRNAs                             :: 2, 4, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 4, 2 (16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 54
            CDSs (without protein)            :: 54
            Pseudo Genes (ambiguous residues) :: 0 of 54
            Pseudo Genes (frameshifted)       :: 27 of 54
            Pseudo Genes (incomplete)         :: 27 of 54
            Pseudo Genes (internal stop)      :: 10 of 54
            Pseudo Genes (multiple problems)  :: 10 of 54
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2621
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMD00233528-rid16434743.denovo.196"
                     /strain="K18-6-464"
                     /db_xref="taxon:1280"
                     /geo_loc_name="Japan: Niigata"
     gene            complement(82..1290)
                     /locus_tag="O7798_002546"
     CDS             complement(82..1290)
                     /locus_tag="O7798_002546"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499885.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AI-2E family transporter"
                     /protein_id="HDC2864736.1"
                     /translation="MNENEKNIRKNFLKFTESRYMKFVGGNDLVFSLIALVLLGIVIF
                     IFEKVSYVFDPFIIVFKTIAAPIIVSLILFYLFNPIVNMMERYRIPRVAGISIIYLAV
                     VGVITLIVNLLIPIIGSQVDSLVKNSPQYLEKLINSIDKIANNTFFSSYYSQINDWLN
                     SLPKKIPSMLSEFTDGFGSKIATFAETIANIGVVIVTTPFVLFFMLKDGHHFKEFSTN
                     IMPPKFRKDFHDLLEKMSVQVGSYIQGQIIVSFCIGILLFIGYSVIGLKYSLVLASIA
                     AVTSVVPYLGPTIAISPAIVIAAITSPWMLLKLAVVWTLVQFVEGHFISPNIMGKTLK
                     IHPLTIIFILLCAGKLLGIVGVILGIPGYAILKVLVTHLFQLFKRRYNRFYGNDVGEY
                     DIKESNKIVE"
     gene            complement(1283..1450)
                     /locus_tag="O7798_002547"
     CDS             complement(1283..1450)
                     /locus_tag="O7798_002547"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499884.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDC2864737.1"
                     /translation="MKKGLINPKLSVLHGRFVTVKGICMVSLMLVILHKWTVFIQHLM
                     NILSGGESIIE"
     gene            complement(1425..2276)
                     /locus_tag="O7798_002548"
     CDS             complement(1425..2276)
                     /locus_tag="O7798_002548"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499883.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcription antiterminator"
                     /protein_id="HDC2864738.1"
                     /translation="MGEYIVTKTLNNNVVVCTNNDQEVILIGKGIGFNKKEGMALNDQ
                     TITIEKIYKLESEQQKAHYKSLVEIADDNVLQVIIDSLNFISNTAMNVDSKQLVVSLT
                     DHIIFAYKRLKQNQVISNPFVMETMQLYSDAYHIAKQVIDQLNAALDVHFPEDEIGFI
                     ALHIASNTEDLSMHEMTLINNVIKKGIDIIESDLVTTVDKESLQYQRFIRHVQFLIRR
                     LRRKEYIHAQDDFVSMIKNHYPICYNTAYKILTMIQKQFDVNISESEIIYLTLHIHHF
                     EERINQS"
BASE COUNT          959 a          436 c          317 g          909 t
ORIGIN      
        1 taatcataaa tgtaactgcc caacattata agcaccataa aaaataccaa caaacatata
       61 gtcattggta ttttttatta cttattcaac tattttatta ctttctttaa tatcatattc
      121 acctacatca ttaccataga aacgattgta tcgacgttta aataattgga ataaatgagt
      181 aactaatact tttaaaatag catatcccgg aatacctaaa ataacgccta caataccaag
      241 caatttgcct gcacacagta aaatgaaaat gattgtaagt ggatgaatct taagtgtttt
      301 acccatgata tttggtgaaa tgaagtgccc ttcaacaaat tgtactaaag tccatactac
      361 tgctaatttt aagagcatcc acggcgatgt tatagcagct attacaatag ctggagaaat
      421 cgctatagta ggccctaaat atggtacaac acttgtaact gccgcaatac tagctaatac
      481 taagctatat ttcaacccga taaccgaata accgataaac aacagtatac cgatacagaa
      541 tgaaacgata atttgtcctt gaatgtatga accaacttga acactcattt tttcaagtag
      601 atcatgaaaa tcttttcgga atttcggtgg cataatattc gttgaaaatt ctttgaagtg
      661 atgtccatct ttaagcataa agaatagtac aaatggtgtt gtgacaatca caacgccaat
      721 attagcaatc gtttctgcaa acgttgcaat tttagaccca aagccatctg taaattcact
      781 taacatagat ggtattttct taggtaaaga atttaaccaa tcattaattt gactataata
      841 cgaagagaaa aacgtattat ttgctatttt atcaatagaa ttaattaatt tttctagata
      901 ttgcggtgaa tttttaacta aactatctac ttgcgaacca ataataggta tcaataaatt
      961 aacaattaac gtaataacac ctactacagc tagataaata atagaaatac ctgcaactct
     1021 tggtattcta taacgttcca tcatatttac gattgggtta aatagataga atagaattaa
     1081 agagacgatg ataggtgctg ctatcgtctt aaaaacgatg ataaaaggat caaaaacata
     1141 tgatactttt tcgaaaataa aaataacaat acccaacaat actagcgcta ttaatgagaa
     1201 gactaaatca ttcccaccaa caaacttcat ataccgtgat tcggtaaatt ttaaaaaatt
     1261 ctttcttata ttcttttcat tttcattcaa ttatagattc accaccactt aaaatattca
     1321 taagatgttg tataaaaaca gtccacttat gtaaaattac taacatcaat gataccatac
     1381 aaataccctt tacagtaacg aaacgcccgt gtaatacact taatttagga ttgattaatc
     1441 ctttcttcaa aatgatgaat gtgtaatgtt aaatatataa tttcagactc actgatatta
     1501 acatcaaatt gtttttgtat catagttaaa attttatatg ctgtgttata gcaaatcgga
     1561 tagtgatttt taatcataga cacaaaatca tcttgtgcat gtatatattc ttttcttctt
     1621 aatcggcgaa ttaaaaattg tacgtgcctt ataaaacgtt ggtattgtaa tgattcctta
     1681 tcaacagttg tcacaaggtc tgattcaatg atatctatac cttttttaat aacattattg
     1741 atcaaggtca tctcatgcat agataaatct tctgtattag atgcaatatg taatgcaata
     1801 aatcctatct catcttcagg aaaatgtaca tctaatgctg catttaactg atcaatcacc
     1861 tgtttagcaa tatgatatgc atcactatat aactgcatag tttccataac aaatggattg
     1921 ctaataactt gattttgttt taagcgttta taagcaaata taatatgatc cgttaatgaa
     1981 actacaagtt gttttgaatc aacattcatc gcagtattag aaataaaatt caacgaatca
     2041 ataattactt gtaatacatt atcatcagcg atttcaacta aacttttata atgtgctttt
     2101 tgttgctcac tttctaattt ataaattttc tctattgtaa tagtttggtc gtttaacgcc
     2161 attccctctt ttttgttaaa accaatacct ttaccgatta aaataacttc ttgatcatta
     2221 ttagtacata ctacgacatt gttgttcaat gttttagtaa caatatattc tcccattatc
     2281 atcacctatt tttctattat taagattata tatcggaaat gtctaacttg aaagtataat
     2341 aatttaaata cttgtgttct attacacgcc tatcctatat gatatatctt aatttaattt
     2401 cgatgtctct caaagtggaa taactataat aaaaaaatct gactcccata tttacaaata
     2461 attctattta tttatatatt atctgaatta atactcaata caaactaaaa cgtactatta
     2521 aattgtgcaa agctaaaaca aatttatatt catctatcca acaatatgtc ttatcaatgg
     2581 tatagtcttt gcacaccaat ggaggaaata aatctcaacc t
//
LOCUS       DALPQQ010000195         2572 bp    DNA     linear   BCT 22-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus strain K18-6-464
            SAMD00233528-rid16434743.denovo.197, whole genome shotgun sequence.
ACCESSION   DALPQQ010000195 DALPQQ010000000
VERSION     DALPQQ010000195.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMD00233528
            Sequence Read Archive: DRR236061
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 2572)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2572)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001543423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001543423.1
            Genome Coverage       :: 77x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/22/2022 17:09:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,811
            CDSs (total)                      :: 2,743
            Genes (coding)                    :: 2,689
            CDSs (with protein)               :: 2,689
            Genes (RNA)                       :: 68
            rRNAs                             :: 2, 4, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 4, 2 (16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 54
            CDSs (without protein)            :: 54
            Pseudo Genes (ambiguous residues) :: 0 of 54
            Pseudo Genes (frameshifted)       :: 27 of 54
            Pseudo Genes (incomplete)         :: 27 of 54
            Pseudo Genes (internal stop)      :: 10 of 54
            Pseudo Genes (multiple problems)  :: 10 of 54
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2572
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMD00233528-rid16434743.denovo.197"
                     /strain="K18-6-464"
                     /db_xref="taxon:1280"
                     /geo_loc_name="Japan: Niigata"
     gene            <1..79
                     /locus_tag="O7798_002549"
     CDS             <1..79
                     /locus_tag="O7798_002549"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499837.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="LSM domain protein"
                     /protein_id="HDC2864739.1"
                     /translation="NSIEIDTGRITYDISENKIKTIVLQ"
     gene            complement(628..1653)
                     /locus_tag="O7798_002550"
     CDS             complement(628..1653)
                     /locus_tag="O7798_002550"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499838.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="low specificity L-threonine aldolase"
                     /protein_id="HDC2864740.1"
                     /translation="MISFENDYLEGAHEKVLKRLVDTNLVQASGYGFDQFTAQAIEKI
                     KDTIDCPNATIRFLVGGTQTNQVVINSMLESYEGVISADTGHVAVHEGGAIEYSGHKV
                     ITIPSKEGKVSASDVETYMETFKSDFKKDHMVFPGMIYISHPTEYGTLYSKSELEELC
                     KVCKQYQLPLFMDGARLGYGLMSDQSDMTIKDIAKYCDVFYIGGTKIGALCGEAIVFT
                     KNNEPKQFTTRIKHHGALLAKGRLTGIQFLELFTDNLYFNISRHAIEMANKMKDGFKN
                     KGYRLYFDSPTNQQFFILSNEKIAELEQKVKFAVWEKYDDQHRVVRFATSWATTEENL
                     NKLLELI"
     gene            1923..2120
                     /locus_tag="O7798_002551"
     CDS             1923..2120
                     /locus_tag="O7798_002551"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_008530240.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDC2864741.1"
                     /translation="MEQIKLKTFTAETLELLEKNINAFLSSEEATNLKLVNITIKAIE
                     ERTFPNNEEEFNAILTLSVNK"
     gene            2178..>2572
                     /locus_tag="O7798_002552"
     CDS             2178..>2572
                     /locus_tag="O7798_002552"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499840.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PLDc N-terminal domain-containing protein"
                     /protein_id="HDC2864742.1"
                     /translation="MRFTFSNDLGTLFTIILAIGFIINLVLAFIIIFLERNRRTASST
                     WAWLFVLFVLPLIGFILYLFFGRTVSARKLNKNNGNVLTDFDGLLKQQIESFDKGNYG
                     TDNKQVQKHHDLVRMLLMDQDGFLTENNKV"
BASE COUNT          913 a          415 c          343 g          901 t
ORIGIN      
        1 taattcgata gaaattgata caggtagaat tacatatgat atatcagaaa ataaaattaa
       61 aactattgtt ttacaataat agcatccttt ctacacagat aaagagaaag cggtgctatt
      121 ttttgcgctt ttataacaac taaggataca agacacataa cttcaacaat atcctcatct
      181 aaacctatcg atttcctaag ctcaatttta aacacaaagt ttatttgaaa tgatgcacac
      241 ctataaaaat cttaatcatc gaaaagtcac aaacatctcc atattaaaaa cttaaatagt
      301 gcattccatt taaactaaac atcgatattc ctaccaatat agacttagta attcgattgt
      361 taatacatta ctttcataaa ataactacaa ccatcataat acttctcaaa tgtcgtcaaa
      421 ttaaagtaaa tacagcacaa attaacattt ttaaatatat aaaataaaac aagatactca
      481 ataatctgta gtaccttgtt ttggaataat gtaattttat atcatcaacg gctacaaatg
      541 agcagtttca tatataaata aacacatcta ctcaactgat cttaattaat taataaatga
      601 tttaccagat gacatataac agcattatta gattaattct aatagtttat ttaaattttc
      661 ttcggttgtc gcccaactgg ttgcgaatct aacaacacga tgttgatcat cgtatttttc
      721 ccaaacagca aatttaactt tttgttctaa ctctgctatt ttctcgttac ttaaaataaa
      781 aaattgttga ttggttggag aatcaaagta aagacgatag cctttatttt taaacccgtc
      841 tttcatctta tttgccattt cgatagcatg tctgcttata ttaaaatata aattgtccgt
      901 aaataattct aaaaattgta tgcctgttaa ccgtcctttt gctaaaaggg caccgtgatg
      961 cttgattcga gtggtaaatt gtttcggttc attatttttc gtaaaaacaa tggcttcccc
     1021 gcataatgca cctatcttcg taccacctat ataaaataca tcacaatatt tagcgatgtc
     1081 tttaatagtc atatctgatt ggtcactcat caatccatac cctaatcgtg caccatccat
     1141 aaataatgga agctgatatt gcttacatac tttgcataac tcttccaatt ctgatttaga
     1201 gtataatgtg ccatattctg taggatgaga aatatatatc attcctggga ataccatatg
     1261 gtccttttta aaatcacttt taaatgtctc catgtaagtt tcaacatctg aagcactaac
     1321 ttttccttcc ttagagggta tagtaattac tttatgtcca ctatattcaa ttgcaccgcc
     1381 ctcatgcaca gcaacatgac cagtgtctgc tgaaatgacc ccttcgtaac tttctaacat
     1441 tgaattaata acaacctgat tggtttgtgt tccacctact aaaaaacgaa ttgtagcatt
     1501 tggacagtca attgtatctt taatcttttc aattgcctga gctgtgaatt gatcaaagcc
     1561 atatcccgaa gcttgtacaa gatttgtatc tactaatcgt tttaatactt tttcatgagc
     1621 accttctaaa taatcatttt cgaatgaaat cactacattt ccccctaaaa ctaatatcaa
     1681 cattttaata agataaacca atttcaaaac tagttcgata tttaaaatgt attatgaatg
     1741 gttaaagttt gtatcgcatt atcgcgaagt tgaataaata tattatacat caaacaatac
     1801 attatgaaaa ttaattattt ttttatcaca gcgacttttc atgctggaac acatgtatta
     1861 atgattgaat tttactgtta aaagttctat gatttaggaa atagagaaaa gaggggattt
     1921 aaatggaaca aattaaactt aaaactttta cagctgagac tttagagtta ttagaaaaaa
     1981 acattaatgc ttttttaagt tctgaagaag ctacaaattt aaaattagta aatattacta
     2041 ttaaagcaat agaagaaaga acattcccaa ataatgaaga agaattcaat gcaattttaa
     2101 ctttatctgt gaataaataa tatgacgtga aaggtgcaaa atgttttttt gtgcctttct
     2161 ttataggaga aaagactatg cgatttacat tttcaaacga tttaggaacg ttatttacta
     2221 ttattttagc cattggattc atcattaatt tagtattggc ttttattatt atctttttag
     2281 aaagaaatag gcgtacagcg agttcaactt gggcatggct atttgtactt tttgtcttac
     2341 cattgattgg ttttattctt tacttgtttt ttggtagaac cgtttcggca cgcaaattga
     2401 ataaaaacaa tggtaacgtg ttaacggatt tcgatggact tttaaaacaa caaatagaaa
     2461 gctttgataa aggtaattat ggtactgata acaaacaagt tcaaaaacat catgatttag
     2521 tacgtatgct tttgatggat caagatggtt ttttaactga aaataataaa gt
//
LOCUS       DALPQQ010000196         2520 bp    DNA     linear   BCT 22-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus strain K18-6-464
            SAMD00233528-rid16434743.denovo.198, whole genome shotgun sequence.
ACCESSION   DALPQQ010000196 DALPQQ010000000
VERSION     DALPQQ010000196.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMD00233528
            Sequence Read Archive: DRR236061
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 2520)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2520)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001543423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001543423.1
            Genome Coverage       :: 77x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/22/2022 17:09:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,811
            CDSs (total)                      :: 2,743
            Genes (coding)                    :: 2,689
            CDSs (with protein)               :: 2,689
            Genes (RNA)                       :: 68
            rRNAs                             :: 2, 4, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 4, 2 (16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 54
            CDSs (without protein)            :: 54
            Pseudo Genes (ambiguous residues) :: 0 of 54
            Pseudo Genes (frameshifted)       :: 27 of 54
            Pseudo Genes (incomplete)         :: 27 of 54
            Pseudo Genes (internal stop)      :: 10 of 54
            Pseudo Genes (multiple problems)  :: 10 of 54
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2520
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMD00233528-rid16434743.denovo.198"
                     /strain="K18-6-464"
                     /db_xref="taxon:1280"
                     /geo_loc_name="Japan: Niigata"
     gene            224..589
                     /locus_tag="O7798_002553"
     CDS             224..589
                     /locus_tag="O7798_002553"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501130.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3139 domain-containing protein"
                     /protein_id="HDC2864743.1"
                     /translation="MKKKKNAIKVIIILFISLIVAVAFFFGLKTYQGHKNIQLIDSYL
                     EEKNLKDKIKSEKTEYSAKKGLFYKEVTFKDEPGVTYVVQPISTNKGLFVEGFDTETK
                     KSLKTAKHKYFNQNYKPSK"
     gene            771..2048
                     /locus_tag="O7798_002554"
     CDS             771..2048
                     /locus_tag="O7798_002554"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501129.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cation:dicarboxylase symporter family
                     transporter"
                     /protein_id="HDC2864744.1"
                     /translation="MALFKRKISLPMQVVIALVLGVVVGLLLYGQENVANYIKPFGDV
                     FLNLIKMIVIPVVFCSLALSISNVGESKTVGRYGWKTILYFEIITTIAIGLGIIFGNL
                     FKPGAGLDPTKLPKGDISKYQSTAHAAEQSTYGNHFIDTIVHIIPTNFFEALNKGELL
                     PIIFFAVFFGLGLAAVGKKAEPVKEFLSGSLEAVFWMINKILKLAPLGVFAFICTTII
                     TFGASALLPLLKLVLVVVFAMVFFVFAILGLVAWMCGINIMNIIRILKSELLLAFSTS
                     SSEAVLPVMMKKMENFGSPKEITSFVIPIGYTFNLDGSALYQSIAALFVAQMYGMHLT
                     LSEQIVLMLTLMITSKGMAAVPGTSIVVLLTTLGAMGLPAQGLALIIGVDRILDMVRT
                     CVNVIGNALSTIVIAKWENVYDKAKGQEYLKSI"
     gene            complement(2452..>2520)
                     /locus_tag="O7798_002555"
     CDS             complement(2452..>2520)
                     /locus_tag="O7798_002555"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501128.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4889 domain-containing protein"
                     /protein_id="HDC2864745.1"
                     /translation="HDDVPHGLMMKIHDMGKMHMKH"
BASE COUNT          858 a          351 c          464 g          847 t
ORIGIN      
        1 gaaaaaaatg taattgtatc atccttaatt gttaaaagta gtcaattatt ttgatagata
       61 gtaaaataaa atttgttatt aaatttttta aaagcatcgt gtatgtaatt cgatttctat
      121 aataatattg agaataaaaa aatttgttac aatctggtaa aaactcttta ttaaataaat
      181 tgattcgttc atactgaata gataagcaaa aaggagttac ataatgaaga agaaaaaaaa
      241 cgcgattaaa gttatcatta tattatttat ttcattaatt gttgcagtag catttttctt
      301 tggtctgaaa acatatcaag gccataagaa tattcaacta attgacagtt acttggaaga
      361 gaaaaatcta aaagataaaa ttaaatcaga aaaaacagag tatagtgcta aaaaaggtct
      421 cttctataag gaagttacat ttaaagatga acctggtgta acttatgttg tgcaaccaat
      481 cagtactaat aaaggattat ttgttgaagg ctttgataca gagactaaga aaagtttgaa
      541 aactgcaaag cataaatatt tcaatcaaaa ttataaacca tcaaaatagt gaaacgttaa
      601 actggtgaag cagtttagtg ccttcaattt taattatttg aggtaaacag tttttgtatg
      661 gaaattagtg atttttgaca tctataaaag ataaatattt taatttttta tagataatta
      721 tcaattttct gatataattg agtgatgtca gatgaagggg agtttgtact atggctctat
      781 tcaagagaaa aattagccta cctatgcaag ttgttattgc attagtgtta ggtgttgtcg
      841 taggactttt attatatgga caagaaaacg tagcaaatta cattaaacca tttggtgacg
      901 tatttttaaa tttaattaaa atgatcgtta taccagttgt attttgctca ctagcgcttt
      961 ctatttcgaa cgttggggaa tcgaaaactg tagggcgtta tggctggaaa acaattttat
     1021 actttgaaat tattacaaca atcgcaatag gtttagggat tatcttcggt aacctattta
     1081 aaccaggtgc tggattagac ccaacaaaat tacctaaagg tgatatttct aaatatcaat
     1141 caactgcaca tgcagcagaa caatctacat atggaaatca ttttattgat accattgtac
     1201 atattattcc gacaaacttt tttgaagctt taaataaggg tgaattatta cctattatct
     1261 tcttcgcagt attctttgga ttaggattag ctgctgtagg taaaaaagca gaaccagtta
     1321 aagaattttt aagcggatcg cttgaagctg tgttctggat gattaataaa attttaaaat
     1381 tagcaccact tggagtgttt gcattcattt gtactacaat tattacattt ggtgcatccg
     1441 cattattacc actattaaaa ttagtattag ttgttgtctt tgcaatggtg ttctttgtat
     1501 tcgctatact aggactagtt gcatggatgt gtggtattaa tatcatgaat attattagaa
     1561 tcttgaaaag tgaattgctt ttagcatttt ctacatcaag ttcggaagct gtacttcctg
     1621 taatgatgaa gaaaatggaa aacttcggtt ctccaaaaga aattacttct tttgttatac
     1681 caattggtta tacgtttaac ttagatggat cagcacttta tcaatctatt gcagcattat
     1741 tcgttgcaca gatgtatgga atgcacttaa cattatcaga gcaaattgtg ttgatgttaa
     1801 cattaatgat tacgtctaaa ggtatggcgg cagtaccagg aacttcaatc gttgttttat
     1861 taacaacatt aggtgccatg ggcttaccgg cacaaggttt agcattaatt attggtgttg
     1921 accgtatctt agatatggta cgtacatgtg taaacgttat tggtaatgca ttatcaacaa
     1981 tcgttatagc taaatgggaa aacgtatatg acaaagcaaa aggtcaagaa tatttaaaat
     2041 caatttaaaa aatactatct gacatttaaa gccccttaca acctttggtt gttaggggct
     2101 tttatgcatg cgctaaagcg caggcgaacg gaagcgtagt gacctcaggt tgttagggac
     2161 ttttatgcat gcgctaaagc gcaggcgaac cgaagcgtag tgacctcagg ttgttagggg
     2221 cttttatgca tgcgctaaag cgcaggcgaa ccggagcgca gtgacctcag gttgttaggg
     2281 gcttttatgc atgcgcaaag cgcaggcgaa cggcaagtgg agctattcaa tatgaaagta
     2341 tttcaaatat aaaaagcagc agtaaaatga ttccaaattg gaaatcaact taccgctgct
     2401 tttactcgta tataccttga tggcaactaa aatttgtaat ttaaattaca attagtgttt
     2461 catgtgcatt ttgcccatgt catgaatttt catcattaaa ccatgtggta catcgtcatg
//
LOCUS       DALPQQ010000197         2519 bp    DNA     linear   BCT 22-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus strain K18-6-464
            SAMD00233528-rid16434743.denovo.199, whole genome shotgun sequence.
ACCESSION   DALPQQ010000197 DALPQQ010000000
VERSION     DALPQQ010000197.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMD00233528
            Sequence Read Archive: DRR236061
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 2519)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2519)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001543423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001543423.1
            Genome Coverage       :: 77x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/22/2022 17:09:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,811
            CDSs (total)                      :: 2,743
            Genes (coding)                    :: 2,689
            CDSs (with protein)               :: 2,689
            Genes (RNA)                       :: 68
            rRNAs                             :: 2, 4, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 4, 2 (16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 54
            CDSs (without protein)            :: 54
            Pseudo Genes (ambiguous residues) :: 0 of 54
            Pseudo Genes (frameshifted)       :: 27 of 54
            Pseudo Genes (incomplete)         :: 27 of 54
            Pseudo Genes (internal stop)      :: 10 of 54
            Pseudo Genes (multiple problems)  :: 10 of 54
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2519
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMD00233528-rid16434743.denovo.199"
                     /strain="K18-6-464"
                     /db_xref="taxon:1280"
                     /geo_loc_name="Japan: Niigata"
     gene            92..910
                     /locus_tag="O7798_002556"
     CDS             92..910
                     /locus_tag="O7798_002556"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499808.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aquaporin family protein"
                     /protein_id="HDC2864746.1"
                     /translation="MNVYLAEFLGTAILILFGGGVCANVNLKRSAANGADWIVITAGW
                     GLAVTMGVFAVGQFSGAHLNPAVSLALALDGSFDWSLVPGYIVAQMLGAIVGATIVWL
                     MYLPHWKATEEAGAKLGVFSTAPAIKNYFANFLSEIIGTMALTLGILFIGVNKIADGL
                     NPLIVGALIVAIGLSLGGATGYAINPARDLGPRIAHAILPIAGKGGSNWSYAIVPILG
                     PIAGGLLGAVVYAVFYKHTFNIGCAIAIVVVIITLILGYILNKSSKKGDIESIY"
     gene            1039..>2519
                     /gene="glpK"
                     /locus_tag="O7798_002557"
     CDS             1039..>2519
                     /gene="glpK"
                     /locus_tag="O7798_002557"
                     /EC_number="2.7.1.30"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499809.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycerol kinase GlpK"
                     /protein_id="HDC2864747.1"
                     /translation="MEKYILSIDQGTTSSRAILFNQKGEIAGVAQREFKQYFPQSGWV
                     EHDANEIWTSVLAVMTEVINENDVRADQIAGIGITNQRETTVVWDKHTGRPIYHAIVW
                     QSRQTQSICSELKQQGYEQTFRDKTGLLLDPYFAGTKVKWILDNVEGAREKAENGDLL
                     FGTIDTWLVWKLSGKAAHITDYSNASRTLMFNIHDLEWDDELLELLTVPKNMLPEVKA
                     SSEVYGKTIDYHFYGQEVPIAGVAGDQQAALFGQACFERGDVKNTYGTGGFMLMNTGD
                     KAVKSESGLLTTIAYGIDGKVNYALEGSIFVSGSAIQWLRDGLRMINSAPQSESYATR
                     VDSTEGVYVVPAFVGLGTPYWDSEARGAIFGLTRGTEKEHFIRATLESLCYQTRDVME
                     AMSKDSGIDVQSLRVDGGAVKNNFIMQFQADIVNTSVERPEIQETTALGAAFLAGLAV
                     GFWESKDDIAKNWKLEEKFDPKMDEGEREKLYRGWKKAVEATQV"
BASE COUNT          816 a          364 c          556 g          783 t
ORIGIN      
        1 aaaagttaat acatagaata gagacgggag atttctacga gccaaactgc tagtgtagga
       61 atctctttgt ctttttggga ggacatttaa tatgaatgta tatttagcag aattcctagg
      121 aactgcaatc ttaatccttt ttggtggtgg cgtttgtgcc aatgtcaatt taaagagaag
      181 tgctgcgaat ggtgctgatt ggattgtcat cacagctgga tggggattag cggttacaat
      241 gggtgtgttt gctgtcggtc aattctcagg tgcacattta aacccagcgg tgtctttagc
      301 tcttgcatta gacggaagtt ttgattggtc attagttcct ggttatattg ttgctcaaat
      361 gttaggtgca attgtcggag caacaattgt atggttaatg tacttgccac attggaaagc
      421 gacagaagaa gctggcgcga aattaggtgt tttctctaca gcaccggcta ttaagaatta
      481 ctttgccaac tttttaagtg agattatcgg aacaatggca ttaactttag gtattttatt
      541 tatcggtgta aacaaaattg ccgatggttt aaatccttta attgtcggag cattaattgt
      601 tgcaatcgga ttaagtttag gcggtgctac tggttatgca atcaacccag cacgtgattt
      661 aggtccgaga attgcacatg cgattttacc aatagctggt aaaggtggtt caaattggtc
      721 atatgcaatc gttcctatct taggaccaat tgccggtggt ttattaggtg cagtggtata
      781 cgctgtattt tataaacata catttaatat tggttgtgca attgcaattg ttgtagttat
      841 tattactttg attttaggtt acattttaaa taaatcatca aaaaaaggtg atatcgaatc
      901 aatttactaa aataaaaaga aacgtaaata gcataattta acatgtttga ttcatggatt
      961 atgctatttt ttcgccaaaa tttaacagat tttgtacaat gggttagcga ttatttttta
     1021 ataaaggaga tactactaat ggaaaaatat attttatcta tagaccaagg aacaacaagc
     1081 tcaagagcga ttttattcaa tcaaaaaggg gaaattgcag gggtagcaca acgtgagttt
     1141 aagcaatatt ttccacaatc aggttgggtt gaacatgatg caaatgaaat ttggacatct
     1201 gtgttagctg taatgacgga agtaattaat gaaaatgatg ttagagctga tcaaattgca
     1261 ggtatcggta ttacaaacca acgtgaaaca acggttgttt gggacaaaca tactggccgc
     1321 ccaatttatc acgcaattgt ttggcaatca cgtcaaacac aatcaatttg ttcagaatta
     1381 aaacaacaag gatatgaaca aacatttaga gataagacag gattactttt agatccgtat
     1441 tttgcaggta caaaagttaa atggattcta gacaatgttg aaggtgcacg agaaaaagca
     1501 gaaaatggcg atctattatt tggaacgatt gatacttggt tagtatggaa attatcagga
     1561 aaagctgcgc atattactga ttattcaaat gcgagtcgta cattaatgtt taatatccat
     1621 gatttagaat gggacgatga gttattagaa ctacttacag tacctaaaaa tatgttgcca
     1681 gaagttaaag cttcgagtga agtatatggt aagacaattg attaccactt ctatggtcaa
     1741 gaagtaccaa tcgctggagt agctggtgat caacaagcag cattatttgg acaagcttgc
     1801 ttcgaacgtg gtgacgtgaa aaacacatat ggaactggtg gcttcatgtt aatgaataca
     1861 ggtgacaaag cggttaaatc tgaaagtggt ttattaacaa caattgctta tggtattgat
     1921 ggaaaagtaa attatgcgct tgaaggttcc atctttgttt cgggttcagc aatccaatgg
     1981 ttacgtgatg gattaagaat gattaattca gcaccacaat cagaaagtta tgcgacacga
     2041 gttgactcta ctgagggtgt ttatgttgtt ccagcttttg taggtttagg aacaccatat
     2101 tgggattctg aagcacgtgg tgcgattttc ggtttaacac gtggaactga aaaagagcac
     2161 tttatccgtg caactttaga atcactatgt taccaaactc gtgacgttat ggaagcaatg
     2221 tcaaaagact ctggtattga tgtccaaagt ttacgtgtcg atggtggtgc agttaaaaat
     2281 aactttatta tgcagttcca agcagacatt gttaatactt ctgttgaaag acctgaaatt
     2341 caagaaacta cagctttagg tgctgcattt ttagcaggtt tagcagttgg attctgggag
     2401 agtaaagatg atatcgctaa aaactggaaa ttagaagaaa aattcgatcc gaaaatggat
     2461 gaaggcgaaa gagaaaaatt atatagaggt tggaaaaaag ctgttgaagc aacacaagt
//
LOCUS       DALPQQ010000198         2519 bp    DNA     linear   BCT 22-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus strain K18-6-464
            SAMD00233528-rid16434743.denovo.200, whole genome shotgun sequence.
ACCESSION   DALPQQ010000198 DALPQQ010000000
VERSION     DALPQQ010000198.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMD00233528
            Sequence Read Archive: DRR236061
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 2519)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2519)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001543423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001543423.1
            Genome Coverage       :: 77x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/22/2022 17:09:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,811
            CDSs (total)                      :: 2,743
            Genes (coding)                    :: 2,689
            CDSs (with protein)               :: 2,689
            Genes (RNA)                       :: 68
            rRNAs                             :: 2, 4, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 4, 2 (16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 54
            CDSs (without protein)            :: 54
            Pseudo Genes (ambiguous residues) :: 0 of 54
            Pseudo Genes (frameshifted)       :: 27 of 54
            Pseudo Genes (incomplete)         :: 27 of 54
            Pseudo Genes (internal stop)      :: 10 of 54
            Pseudo Genes (multiple problems)  :: 10 of 54
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2519
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMD00233528-rid16434743.denovo.200"
                     /strain="K18-6-464"
                     /db_xref="taxon:1280"
                     /geo_loc_name="Japan: Niigata"
     gene            91..486
                     /gene="spxA"
                     /locus_tag="O7798_002558"
     CDS             91..486
                     /gene="spxA"
                     /locus_tag="O7798_002558"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499487.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator Spx"
                     /protein_id="HDC2864748.1"
                     /translation="MVTLFTSPSCTSCRKAKAWLQEHDIPYTERNIFSEHLTIDEIKQ
                     ILKMTEDGTDEIISTRSKTYQKLNVDIDSLPLQDLYSIIQDNPGLLRRPIILDNKRLQ
                     VGYNEDEIRRFLPRKVRTFQLQEAQRMVD"
     gene            857..1576
                     /gene="mecA"
                     /locus_tag="O7798_002559"
     CDS             857..1576
                     /gene="mecA"
                     /locus_tag="O7798_002559"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499488.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adaptor protein MecA"
                     /protein_id="HDC2864749.1"
                     /translation="MRIERVDDTTVKLFITYSDIEARGFSREDLWTNRKRGEEFFWSM
                     MDEINEEEDFVVEGPLWIQVHAFEKGVEVTISKSKNEDMMNMSDDDATDQFDEQVQEL
                     LAQTLEGEDQLEELFEQRTKEKEAQGSKRQKSSARKNTRTIIVKFNDLEDVINYAYHS
                     NPITTEFEDLLYMVDGTYYYAVYFDSHVDQEVINDSYSQLLEFAYPTDRTEVYLNDYA
                     KIIMSHNVTAQVRRYFPETTE"
     gene            1697..>2519
                     /locus_tag="O7798_002560"
     CDS             1697..>2519
                     /locus_tag="O7798_002560"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499489.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="competence protein CoiA"
                     /protein_id="HDC2864750.1"
                     /translation="MLVALNEEKERVLATTALRKTQYFCPVCGKQVILKRGLKVISHF
                     AHKHLAEQKCFNNETIKHYKSKLILAQMIQQQGCKVEIEPFLKEIKQIPDILINNKYV
                     IELQYSPIPYKQILQRTEGLKKMGYKVSWLLNDVDYCHNKVKFNHFQSMFINPFTRKL
                     HTFNLEKKQIMMFQQIQYLGGHKYVAEKRNAKISELFNEAPCDYHAVYKLSKFAINQY
                     IKYCRWQNSVLEPTLSAMYQLQLTDQEVVHNYGYIFPEQIYIKNHPIEWQLQVDLW"
BASE COUNT          946 a          318 c          429 g          826 t
ORIGIN      
        1 ttaagaattt tagaaaaaaa tgttttttct tgatctataa ctaaatttta agcaatgaat
       61 tttattcatt caaataggag agtgagatgt atggtaacat tatttacttc accaagttgc
      121 acatcttgcc gtaaagcgaa agcatggtta caagaacatg acattccgta tacggagcgt
      181 aatatttttt ctgaacattt aacaattgat gaaattaagc aaatattaaa aatgactgaa
      241 gacggtactg atgaaatcat ttctacacgt tctaaaacat accaaaaatt aaatgttgat
      301 attgattcac taccattaca agacttatat tcaatcattc aagataatcc tggcttatta
      361 cgtcgtccaa ttattttaga taataaacga ctacaagttg gttataatga ggacgagatt
      421 cgacgtttct tacctagaaa agttcgtacg ttccaattac aagaagcaca acgtatggtt
      481 gactaataac catttaacta tgtgtcatac tttactaaaa gatatgtcaa gcaacactat
      541 ttctatagtg ttgctttttt ggttttaatt ttacaataat tgcttagtat cttttaaatc
      601 aaatgtgcaa ttgttaatat agctctatat tagagtgttt tggatgaaac atttgctatg
      661 ataaggtaaa attaaattaa gaaagtgctt taatgcttta actgtataaa tcatttaaat
      721 agttttgcta caacgaatat gttattataa gttaccaaaa tattttagag aaagaaatca
      781 aacaaataaa ttgtattttg tttgatgctt taatacaatg tggatactat tcatcgactg
      841 taaggagtga gatgatatga gaatagaacg agtagatgat acaactgtaa aattgtttat
      901 aacatatagc gatatcgagg cccgtggatt tagtcgtgaa gatttatgga caaatcgcaa
      961 acgtggcgaa gaattctttt ggtcaatgat ggatgaaatt aacgaagaag aagattttgt
     1021 tgtagaaggt ccattatgga ttcaagtaca tgcctttgaa aaaggtgtcg aagtcacaat
     1081 ttctaaatct aaaaatgaag atatgatgaa tatgtctgat gatgatgcaa ctgatcaatt
     1141 tgatgaacaa gttcaagaat tgttagctca aacattagaa ggtgaagatc aattagaaga
     1201 attattcgag caacgaacaa aagaaaaaga agctcaaggt tctaaacgtc aaaagtcttc
     1261 agcacgtaaa aatacaagaa caatcattgt gaaatttaac gatttagaag atgttattaa
     1321 ttatgcatat catagcaatc caataactac agagtttgaa gatttgttat atatggttga
     1381 tggtacttat tattatgctg tatattttga tagtcatgtt gatcaagaag tcattaatga
     1441 tagttacagt caattgcttg aatttgctta tccaacagac agaacagaag tttatttaaa
     1501 tgactatgct aaaataatta tgagtcataa cgtaacagct caagttcgac gttattttcc
     1561 agagacaact gaataacgat attaattaag caacgcacta tgaaaggaga ctctttggag
     1621 tctctttttt tattgatttc aaaagctgaa aaagtaatag tagttaaact tacgtgtaat
     1681 attttgaggt gaagatatgt tagtagcttt aaatgaagaa aaggaacgcg tattagcaac
     1741 tactgcattg agaaagacac aatatttttg tccggtgtgt ggcaagcaag ttattttaaa
     1801 gcgtgggctc aaagtaatta gtcattttgc acataaacat ttagcggaac aaaaatgttt
     1861 taataatgaa acgattaaac attataaaag taaattgatt ttagcacaga tgatacagca
     1921 acaaggatgt aaagtagaga tagagccatt tttaaaagaa ataaaacaaa ttccggatat
     1981 tttgattaat aataaatatg ttattgagct acagtattcg ccaattcctt ataaacagat
     2041 tcttcaacga acggaaggtt taaagaaaat gggatataaa gtaagttggt tattaaatga
     2101 tgttgattat tgtcataata aagtgaagtt caatcatttt caaagtatgt ttattaatcc
     2161 attcactcga aaacttcata cgttcaattt agagaaaaaa caaataatga tgtttcaaca
     2221 aatacaatat ttaggcgggc acaaatatgt cgctgaaaaa agaaatgcca aaattagtga
     2281 gttgtttaat gaggcgcctt gtgattatca tgctgtttat aaattatcaa agttcgcaat
     2341 taatcaatat atcaaatatt gtcgctggca aaattctgtt ttagaaccca ctttaagtgc
     2401 aatgtatcaa ttacagttaa ctgatcaaga agtagtgcac aattatggtt atatttttcc
     2461 agagcaaatt tatattaaaa atcatcctat tgagtggcaa ttacaagttg atttatggt
//
LOCUS       DALPQQ010000199         2488 bp    DNA     linear   BCT 22-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus strain K18-6-464
            SAMD00233528-rid16434743.denovo.202, whole genome shotgun sequence.
ACCESSION   DALPQQ010000199 DALPQQ010000000
VERSION     DALPQQ010000199.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMD00233528
            Sequence Read Archive: DRR236061
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 2488)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2488)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001543423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001543423.1
            Genome Coverage       :: 77x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/22/2022 17:09:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,811
            CDSs (total)                      :: 2,743
            Genes (coding)                    :: 2,689
            CDSs (with protein)               :: 2,689
            Genes (RNA)                       :: 68
            rRNAs                             :: 2, 4, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 4, 2 (16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 54
            CDSs (without protein)            :: 54
            Pseudo Genes (ambiguous residues) :: 0 of 54
            Pseudo Genes (frameshifted)       :: 27 of 54
            Pseudo Genes (incomplete)         :: 27 of 54
            Pseudo Genes (internal stop)      :: 10 of 54
            Pseudo Genes (multiple problems)  :: 10 of 54
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2488
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMD00233528-rid16434743.denovo.202"
                     /strain="K18-6-464"
                     /db_xref="taxon:1280"
                     /geo_loc_name="Japan: Niigata"
     gene            <1..621
                     /locus_tag="O7798_002561"
     CDS             <1..621
                     /locus_tag="O7798_002561"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500944.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helicase"
                     /protein_id="HDC2864751.1"
                     /translation="NLVNKDETFISWTRGLTQKFSKGKNISINPERIVKFMHRPFTKK
                     WIVYDKNIMEMPSRYYNIMENTGQVIYIQGQGMNKEFSAMITDILPNFQFIGNGKGFA
                     TYKGKDSLRLVDNISNSFKKKINLNSEEIVYYIYAILHHKYYVNKYSSDLSKGFPRIP
                     ILKDVYGFVEIGRELVELHLNYEKQLNWDGVEIIYNNMNPNYKVEK"
     gene            642..911
                     /locus_tag="O7798_002562"
     CDS             642..911
                     /locus_tag="O7798_002562"
                     /inference="COORDINATES: protein motif:HMM:NF037202.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helicase"
                     /protein_id="HDC2864752.1"
                     /translation="MDTVIYNTDITVTNIPNKVYNYIVNGKPAIEWIIDQYNVSIDKK
                     SGILDDPNEFSEDPNYILNLLLSVITVSMKTLGLIDKLPDFEVLD"
     gene            972..1715
                     /locus_tag="O7798_002563"
     CDS             972..1715
                     /locus_tag="O7798_002563"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000365049.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDC2864753.1"
                     /translation="MDLLQIEKKGNLTKTVQLMHDEKGSASGESKVNMEFGKQSAVKQ
                     IFDSLLGMSASASASAGINGNITGERVAKTILENTLIYDFLDTVEFRKKKTIIDISEG
                     FKLNIQQDTMTYFATITPIASMFEGSKHLDEEELSFDVSKMNEAIRSIKGYFELIGTR
                     GNENRVFRFNIESFKNNYRIQDLKFMNLTLYSVLVGEISKENLNYDKEFDLNQGAKPS
                     GIGKFKGIRSEATKEDKYQVYDVILAGVK"
     gene            1716..>2488
                     /locus_tag="O7798_002564"
     CDS             1716..>2488
                     /locus_tag="O7798_002564"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500940.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HDC2864754.1"
                     /translation="MEIHVYTGPLCGFNEYINSEVKEYHRFMELIREYNIIVRASDTF
                     GTHDVDGIFDTEIENLVIFSNDFASVTTHVITNFINIVTLGRNIKKIYIQNPPKRVFQ
                     SLNSFHDSEIIEINYEYTTLKKDDVINFYKEQMAGSKIIGQTDAKKQMSIDLYKHTSL
                     ENNKPTVMLYYGPSGVGKTELAKEIAKKYKGNITRIQFSMMQNDESFNYIFGDEHAKV
                     SLSKDLVDRETNVVLIDEFDKVLPIYYNVFYQMFDEGII"
BASE COUNT          992 a          277 c          441 g          778 t
ORIGIN      
        1 aatttagtga acaaagatga aacatttatt agttggacac gaggacttac ccaaaaattt
       61 tctaaaggaa aaaatatttc aattaatcca gagagaattg ttaaatttat gcatagacca
      121 tttacaaaaa aatggatagt gtacgacaaa aatattatgg aaatgccaag tagatattat
      181 aatataatgg agaatactgg acaggtgatt tatatacaag gacagggaat gaataaagaa
      241 ttctcggcta tgatcacgga catattacct aatttccaat ttattggtaa tggcaaaggc
      301 tttgctacat acaaaggtaa agatagtttg aggcttgtag ataatatttc taattctttt
      361 aaaaagaaaa taaatcttaa ttcagaagag atagtatatt atatatatgc aattttgcat
      421 cataaatatt atgtgaacaa atattcaagt gatttgagta aaggttttcc gcgaataccg
      481 atattaaagg atgtatatgg atttgttgaa attggtaggg agttagtgga attacattta
      541 aattatgaaa aacaactcaa ttgggatggt gtagaaataa tttataataa tatgaatccg
      601 aattataaag ttgaaaaatg aagcacccta aaaagggcgt gttggataca gtaatataca
      661 ataccgatat tacagttact aacattccaa ataaagtata taattatatt gtgaatggca
      721 agcctgctat tgaatggatt atagatcagt acaacgtaag catcgacaag aaatctggaa
      781 tattagatga tcctaatgaa tttagtgaag atccgaatta cattttaaat ctgcttttat
      841 cagttattac tgtaagtatg aaaactcttg gattaataga taaattacca gattttgaag
      901 tattagatta aggagaggat atattgacaa atactatcaa aaaaataatt tattttgatg
      961 aactatcagc aatggattta ttacagatag agaagaaagg taaccttact aaaacagttc
     1021 agttgatgca tgatgaaaaa ggtagtgcaa gtggtgaatc taaagtgaac atggaatttg
     1081 gtaagcaaag cgctgtaaaa caaatttttg attctttact tgggatgtca gcgagtgctt
     1141 cggctagtgc aggtataaat ggaaatataa ctggagagcg agtagccaaa acaattttag
     1201 agaatacatt aatatatgat tttttggata cagtagagtt tagaaagaaa aaaactatta
     1261 ttgatatttc agaggggttt aaactaaata ttcaacaaga tacgatgaca tatttcgcga
     1321 ctattacccc catagcaagt atgtttgaag gatctaaaca tctagacgag gaggagctat
     1381 catttgatgt ttcaaaaatg aatgaagcga ttagaagtat taaaggctat tttgaattaa
     1441 taggaacaag agggaatgaa aacagagttt ttagatttaa tatagaatct tttaaaaata
     1501 actatagaat acaagattta aaatttatga atttaacact ctactcagta cttgttggtg
     1561 aaataagcaa agaaaatcta aattacgata aagagtttga tctaaatcaa ggtgccaaac
     1621 ctagtggaat tggaaagttt aagggaatta gatcagaagc aactaaagaa gataaatatc
     1681 aagtgtatga tgttattctt gcaggagtga aataaatgga aattcatgtt tatacgggac
     1741 cgctttgtgg atttaatgaa tatattaatt ctgaagttaa agaatatcac cgcttcatgg
     1801 aattaatcag agaatacaat atcatagtgc gagcaagtga tacatttgga actcatgatg
     1861 ttgatggtat ttttgatact gagatagaaa atcttgtgat attttcaaac gactttgctt
     1921 ctgtaacaac tcatgttatt actaatttta taaatatcgt tactttaggt agaaatatta
     1981 agaaaatcta tattcagaat cctccaaaaa gagtatttca atcactaaat agttttcacg
     2041 attctgaaat aatagaaata aactatgaat atacaacatt aaaaaaagat gatgtaataa
     2101 atttttataa agagcagatg gctggttcta aaataatagg tcaaacagac gctaaaaaac
     2161 aaatgagcat agatttatat aaacatactt ccttagaaaa taataaaccg accgtaatgc
     2221 tttactatgg tccatcaggt gttggaaaaa cagaattagc caaagaaata gcaaaaaaat
     2281 ataaaggtaa tatcactaga atacaatttt ctatgatgca gaatgatgaa tcttttaatt
     2341 atatctttgg agatgaacat gccaaagtat cattgtcaaa agatttagta gatcgtgaaa
     2401 ctaatgttgt tttaattgat gaatttgata aggtattacc aatctattac aatgttttct
     2461 atcaaatgtt tgatgaaggt attattga
//
LOCUS       DALPQQ010000200         2482 bp    DNA     linear   BCT 22-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus strain K18-6-464
            SAMD00233528-rid16434743.denovo.203, whole genome shotgun sequence.
ACCESSION   DALPQQ010000200 DALPQQ010000000
VERSION     DALPQQ010000200.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMD00233528
            Sequence Read Archive: DRR236061
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 2482)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2482)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001543423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001543423.1
            Genome Coverage       :: 77x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/22/2022 17:09:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,811
            CDSs (total)                      :: 2,743
            Genes (coding)                    :: 2,689
            CDSs (with protein)               :: 2,689
            Genes (RNA)                       :: 68
            rRNAs                             :: 2, 4, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 4, 2 (16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 54
            CDSs (without protein)            :: 54
            Pseudo Genes (ambiguous residues) :: 0 of 54
            Pseudo Genes (frameshifted)       :: 27 of 54
            Pseudo Genes (incomplete)         :: 27 of 54
            Pseudo Genes (internal stop)      :: 10 of 54
            Pseudo Genes (multiple problems)  :: 10 of 54
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2482
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMD00233528-rid16434743.denovo.203"
                     /strain="K18-6-464"
                     /db_xref="taxon:1280"
                     /geo_loc_name="Japan: Niigata"
     gene            <1..710
                     /locus_tag="O7798_002565"
     CDS             <1..710
                     /locus_tag="O7798_002565"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499479.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HDC2864755.1"
                     /translation="IRKRKDLLKFNKKIQMIFQDPYASLNPRLKVMDIVAEGIDIHHL
                     ATDKRDRKKRVYDLLETVGLSKEHANRYPHEFSGGQRQRIGIARALAVEPEFIIADEP
                     ISALDVSIQAQVVNLLLKLQRERGITFLFIAHDLSMVKYISDRIAVMHFGKIVEIGPA
                     EEIYQNPLHDYTKSLLSAIPQPDPESERSRKRFSYIDDEANNHLRQLHEIRPNHFVFS
                     TEEEAAQLRENKLVTQN"
     gene            729..2384
                     /locus_tag="O7798_002566"
     CDS             729..2384
                     /locus_tag="O7798_002566"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499480.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide ABC transporter substrate-binding
                     protein"
                     /protein_id="HDC2864756.1"
                     /translation="MTRKFRTLILILIATIALSGCANDDGIYSDKGQVFRKILSSDLT
                     SLDTSLITDEISSEVTAQTFEGLYTLGKGDKPVLGVAKAFPEKSKDGKTLKVKLRSDA
                     KWSNGDKVTAQDFVYAWRKTVDPKTGSEFAYIMGDIKNASDISTGKKPVEQLGIKALN
                     DETLQIELEKPVPYINQLLALNTFAPQNEKVAKKYGKNYGTSADRAVYNGPFKVDDWK
                     QEDKTLLSKNQYYWDKKNVKLDKVNYKVIKDLQAGASLYDTESVDDAVITADQVNKYK
                     DNKGLNFVLTTGTFFVKMNEKQYPDFKNKNLRLAIAQAIDKKGYVDSVKNNGSIPSDT
                     LTAKGIAKAPNGKDYASTMNSPLKYNPKEARAHWDKAKKELGKNEVTFSMNTEDTPDA
                     KISAEYIKSQVEKNLPGVTLKIKQLPFKQRVSLELSNNFEASLSGWSADYPDPMAYLE
                     TMTTGSAQNNTDWGNKEYDQLLKVARTKLALQPNERYENLKKAEEMFLGDAPVAPIYQ
                     KGVAHLTNPQVKGLIYHKFGPNNSLKHVYIDKSIDKETGKKKK"
BASE COUNT          968 a          365 c          459 g          690 t
ORIGIN      
        1 agattcgtaa acgtaaagat ttgcttaaat ttaataaaaa gatacagatg atttttcaag
       61 acccatatgc gtctttaaat cctaggttaa aagtaatgga tatagtagct gaaggtattg
      121 atatccatca tttagcaact gataagcgtg accgaaaaaa acgtgtctat gatttacttg
      181 aaactgttgg attaagtaaa gaacatgcca atcgctatcc tcatgaattt tcaggtggac
      241 aacgccaacg tattggaatt gcccgtgcat tagccgttga accagaattc attatcgcgg
      301 acgaaccaat atcggcattg gatgtttcaa tccaagctca agtagttaat ttattattaa
      361 aattacaacg tgaaagaggg attacgttcc tatttatagc tcatgatcta tcaatggtga
      421 agtatatttc agatcgtatt gcagtcatgc attttgggaa aatagttgaa attggaccgg
      481 cagaagaaat ttatcaaaat ccattacacg attatactaa gtctttatta tcagccattc
      541 cacaacctga tcctgaatca gaacgcagtc gcaaacgatt tagttatatt gatgatgaag
      601 caaataatca tttaagacaa ttacatgaaa ttagaccgaa tcactttgtc tttagtactg
      661 aagaagaagc ggcacaacta cgagaaaata aattggtgac acaaaattaa ggggaagggg
      721 gaaatgcaat gacgagaaaa tttagaacac ttattttaat tttgattgct acaattgcat
      781 taagtggttg tgctaatgac gatggtattt attcagataa aggtcaagta ttcagaaaaa
      841 ttttgtcatc agacttaaca tcccttgata catcattaat aacggatgaa atatcttctg
      901 aagtgactgc gcaaacattc gaaggtttat acacattagg aaaaggtgac aaaccggtgt
      961 taggtgttgc gaaagctttt cctgaaaaga gtaaagatgg taaaacttta aaggttaaat
     1021 taagaagcga tgctaaatgg agcaatggtg acaaagtgac tgcacaagac tttgtttatg
     1081 cttggagaaa aacagttgac cctaaaacag gttctgaatt tgcatacatt atgggggaca
     1141 ttaaaaatgc gagtgatatt agtactggta agaaacctgt agagcaatta ggtatcaaag
     1201 cattaaatga tgaaacatta caaattgaat tagaaaagcc ggttccatat attaatcaat
     1261 tattagcact taataccttt gcacctcaaa atgaaaaagt tgccaaaaaa tatggtaaaa
     1321 attacggtac gtcagctgat agagcggtat acaatggtcc atttaaagtt gatgattgga
     1381 aacaagaaga taaaacctta ctatctaaaa atcagtatta ttgggataaa aagaatgtaa
     1441 aattagataa agtgaattat aaagttatta aagacttaca agccggtgca tcattgtatg
     1501 atactgaatc agtagatgac gcagttatta ctgcagatca agtaaataaa tataaagaca
     1561 acaaaggatt aaactttgtg ttaacgactg ggacattttt tgtaaaaatg aatgaaaaac
     1621 aatatcctga ttttaaaaac aaaaatttaa gattggctat cgcacaagca atagataaaa
     1681 aaggatacgt tgattcagtg aaaaacaatg gctcaattcc ttccgataca ctaacagcca
     1741 aaggaattgc gaaagcgcct aatggcaaag attatgcgag taccatgaat tcgcctttaa
     1801 aatataatcc taaagaagca agagcacact gggacaaagc taaaaaagag ttaggtaaaa
     1861 atgaagtgac attttcaatg aacacagaag atacgccaga tgcaaaaata tctgctgaat
     1921 atatcaaatc gcaagttgag aaaaatttac caggagttac tttgaaaatt aagcaattac
     1981 cgtttaaaca aagagtatca ctagaactga gtaacaattt tgaagcatca cttagtggtt
     2041 ggtctgcaga ttaccctgat cctatggctt atttagaaac aatgaccaca ggtagcgcac
     2101 aaaataatac agactggggt aataaagaat atgatcaatt acttaaagta gcaagaacca
     2161 aattggcact tcaaccgaac gaacgatatg aaaacttgaa aaaagcagaa gaaatgttcc
     2221 taggagatgc accggtagca ccaatttatc aaaaaggtgt tgcacattta acaaatcctc
     2281 aagtaaaagg attaatttac cataaatttg gtccaaataa ctcacttaaa catgtatata
     2341 ttgataaatc gatagataaa gaaacaggta agaagaaaaa ataatatgct ttgtaaatta
     2401 ggctggagac atatctccag tctttttgtg ttggataaaa actttgggaa taaaaattta
     2461 aaataagtcg ttttttaaat ta
//
LOCUS       DALPQQ010000201         2477 bp    DNA     linear   BCT 22-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus strain K18-6-464
            SAMD00233528-rid16434743.denovo.204, whole genome shotgun sequence.
ACCESSION   DALPQQ010000201 DALPQQ010000000
VERSION     DALPQQ010000201.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMD00233528
            Sequence Read Archive: DRR236061
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 2477)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2477)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001543423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001543423.1
            Genome Coverage       :: 77x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/22/2022 17:09:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,811
            CDSs (total)                      :: 2,743
            Genes (coding)                    :: 2,689
            CDSs (with protein)               :: 2,689
            Genes (RNA)                       :: 68
            rRNAs                             :: 2, 4, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 4, 2 (16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 54
            CDSs (without protein)            :: 54
            Pseudo Genes (ambiguous residues) :: 0 of 54
            Pseudo Genes (frameshifted)       :: 27 of 54
            Pseudo Genes (incomplete)         :: 27 of 54
            Pseudo Genes (internal stop)      :: 10 of 54
            Pseudo Genes (multiple problems)  :: 10 of 54
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2477
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMD00233528-rid16434743.denovo.204"
                     /strain="K18-6-464"
                     /db_xref="taxon:1280"
                     /geo_loc_name="Japan: Niigata"
     gene            <1..>2477
                     /locus_tag="O7798_002567"
     CDS             <1..>2477
                     /locus_tag="O7798_002567"
                     /inference="COORDINATES: protein motif:HMM:NF020018.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDC2864757.1"
                     /translation="STKEEQPSAEEVGKEAQSSTEESTKEEQPSAEEVENDTSDISQV
                     KDEATAATYYKEVANVSDEKAEEVIRDLGLDTESMSEQELQLALIKYLANKQKESQPL
                     ATALRAASPNNSESINVASNELINTLAVSSNEIIDADAIASGKITKGSDLQVTKGIVS
                     GWLDVATNNYTPGVNGSQTALNDYKVYLQWMDKDGTVSPVYQATTHDLGGTRAGQGGN
                     GTYAFDIGDGWTDANGKLHKPDFQSVSRQKYKMWLAPGQKSENGNEYFTYRKQPGNST
                     GFSGAVVPTGEFILANHSIQRTAVYVYEKPSNVTMTTPESEWKYDDKGPDSNPSYLPD
                     SINKKDRYAVSGKVWWETTTTGTTYPTSAGESFVDQTLEEAKDGFRVVTSVLTPEGKQ
                     ALSTTNGIDDVNERIKAQQELIKTNPEYIQQTVVAPIVDGSYTARFDDKFDVNYMYQY
                     VMDKDGNVVPGYTGYSSPVFTSPNDYAGSVPFIASNNSYAYNVHFALVADPAKYDIDI
                     TNFDAIDNIAHPGDTAISNVSSMYYPGEKTEIVWLDTSGDKPVELSRTEVNNEAEAEQ
                     AAQFTVPEDIDSRKTYTVQLVVNGNVIGADSFAADNIVQPEIDPIDDQTVVEGNPITE
                     VNVNTNKPDAEVTVEGLPEGVTYDPETGIISGTPVVNDWKDNWDPSNSSASTFEEERD
                     FPVTVTLTDENGTTTSEDFVIKVQRDTDKDGNPDINDNDDDGDGVQDDDEINESTNPK
                     DSENHLGDNDRYDPTVEEVNKDHGTPTTEEDVTGAVTVPDYPSEGEQPVITVDDPNQL
                     PDGNTPGTTEVDVTVTYPDGTKDHVKVP"
BASE COUNT          946 a          398 c          492 g          641 t
ORIGIN      
        1 tcaacaaaag aagaacaacc aagtgctgaa gaagtaggta aagaagcgca atcaagtact
       61 gaagaatcaa caaaagaaga acaaccaagt gctgaagaag ttgaaaatga cacttcagac
      121 atttcgcaag tgaaagatga agcaacagct gctacatatt ataaagaagt tgctaatgtt
      181 tcggatgaaa aagctgaaga agtcattcgc gacttaggtc tagatacaga aagcatgagt
      241 gaacaagaat tacagcttgc attaattaaa tatttagcta ataaacaaaa agaaagtcag
      301 ccattagcaa cagcattgag agctgcttca cctaacaata gtgaatcaat taatgttgct
      361 tcaaacgaac ttatcaatac attagctgta tcgtcaaatg aaattattga tgctgatgca
      421 attgcttcag gaaagattac aaaaggttct gacctccaag taacaaaagg tatcgttagt
      481 ggatggttag atgttgctac aaataactat actcctggtg ttaatggctc acaaacagca
      541 ttaaatgatt ataaagttta tttacagtgg atggataaag atggaactgt atctcctgta
      601 tatcaagcaa cgacacatga tttaggtggt acaagagctg gacaaggtgg taatggaaca
      661 tacgcatttg atataggcga tggctggaca gatgcaaatg gtaagttaca caaaccagac
      721 tttcaatctg tatcaaggca aaaatataaa atgtggttag cgccaggtca aaaatcagaa
      781 aatggaaatg aatactttac ttatagaaaa caaccaggta attcaacagg attttctggt
      841 gcagtagtgc caacaggtga atttattcta gcaaatcata gtattcaaag aacggctgtt
      901 tatgtatatg aaaaaccaag taacgtaacg atgacaacac cggaatctga gtggaaatac
      961 gacgataaag gaccagacag taacccttct tatctaccag actcaataaa caagaaagat
     1021 cgttatgctg taagtggtaa ggtttggtgg gaaacaacca ctactggaac gacttatcct
     1081 acttcagctg gtgaatcatt tgtagaccaa actttagaag aagctaagga tggctttaga
     1141 gtagtaacaa gcgtgttaac tcctgaagga aaacaagctc tttctactac aaatggcata
     1201 gacgatgtaa atgaacgtat taaagcacaa caagaattaa tcaaaacaaa tccagaatac
     1261 attcaacaaa cagtagttgc accaatcgta gatggtagtt atactgcaag atttgatgac
     1321 aaatttgatg ttaattatat gtatcaatat gtaatggata aagatggtaa tgtagttcct
     1381 ggttatactg gctactcatc tccagtattc acttctccta atgactatgc tggttcagta
     1441 ccatttattg catctaataa ttcatatgct tataatgtac attttgcatt agtagctgat
     1501 ccagctaaat atgatattga tattactaat tttgatgcta ttgataatat agctcatcct
     1561 ggtgatacag ctataagtaa tgtaagttca atgtattatc caggtgaaaa aactgaaatt
     1621 gtttggttag atacatcagg tgataaacct gtagaacttt caagaactga agtaaataat
     1681 gaagctgaag cagagcaagc agcacaattt acagttcctg aagatattga tagtagaaaa
     1741 acatatactg ttcaattagt agttaatggt aatgtaatcg gagcagattc atttgcagct
     1801 gataatatcg tacaacctga aattgatcca attgatgatc aaacagttgt tgaaggtaat
     1861 ccaattacag aagtcaatgt aaatactaat aaacctgacg cagaggttac agttgaaggg
     1921 ctaccagaag gtgtaacata tgaccctgaa acaggaatta tttctggcac accagtagta
     1981 aatgactgga aagataattg ggacccaagt aattcatcag caagtacatt tgaagaagag
     2041 cgtgatttcc ctgtaactgt tacattaact gatgaaaatg gaacaactac cagtgaagat
     2101 tttgttatta aagttcaaag agatacagat aaagacggaa atccagacat taatgataat
     2161 gatgatgatg gcgatggtgt acaagacgat gacgagatta atgaatcaac aaatcctaaa
     2221 gactcagaaa atcatttagg agataatgat cgttacgacc caacagtaga agaagttaac
     2281 aaagatcacg gcacaccaac aacagaagaa gacgtaacag gagcagtaac agtgccagat
     2341 tatccaagtg aaggtgagca accagtcatc acagtggatg atccgaacca attaccagac
     2401 ggtaatacac caggaacaac agaagtagat gtgacagtaa cgtatccaga tggaacaaaa
     2461 gatcatgtta aagttcc
//
LOCUS       DALPQQ010000202         2470 bp    DNA     linear   BCT 22-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus strain K18-6-464
            SAMD00233528-rid16434743.denovo.205, whole genome shotgun sequence.
ACCESSION   DALPQQ010000202 DALPQQ010000000
VERSION     DALPQQ010000202.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMD00233528
            Sequence Read Archive: DRR236061
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 2470)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2470)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001543423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001543423.1
            Genome Coverage       :: 77x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/22/2022 17:09:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,811
            CDSs (total)                      :: 2,743
            Genes (coding)                    :: 2,689
            CDSs (with protein)               :: 2,689
            Genes (RNA)                       :: 68
            rRNAs                             :: 2, 4, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 4, 2 (16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 54
            CDSs (without protein)            :: 54
            Pseudo Genes (ambiguous residues) :: 0 of 54
            Pseudo Genes (frameshifted)       :: 27 of 54
            Pseudo Genes (incomplete)         :: 27 of 54
            Pseudo Genes (internal stop)      :: 10 of 54
            Pseudo Genes (multiple problems)  :: 10 of 54
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2470
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMD00233528-rid16434743.denovo.205"
                     /strain="K18-6-464"
                     /db_xref="taxon:1280"
                     /geo_loc_name="Japan: Niigata"
     gene            <1..980
                     /locus_tag="O7798_002568"
     CDS             <1..980
                     /locus_tag="O7798_002568"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499521.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="bacteriocin-associated integral membrane family
                     protein"
                     /protein_id="HDC2864758.1"
                     /translation="DYYTIEFAPYHETKQSLIDNMVRSEQLVKASEAENNAILFKPKG
                     DSVDNDNFSPDEGNVILVNNQFWSIYYKQFQPDIPIKNQKNNVEVIIPQKFHAMRNEI
                     NQAYHSWFEFVQNKNNKENKLSIQFINKNYCRIFSFDARDSRHLSFIEAPIIVNVQAS
                     DLSNDFYYAMISQGGYLFKNYDALVKNIEKYHLDGEISGITNYKDSVMEMYHENNLKL
                     TVLNFSQIIIAIILIIIILFDVKYYFEQHRKLLVIKKLYGYSTLRANYQYLLINNIVV
                     IFIGILTNVILHSHYIMMLFATILVVQILLQICSLYYHGRRFNEVIKEF"
     gene            983..1303
                     /locus_tag="O7798_002569"
     CDS             983..1303
                     /locus_tag="O7798_002569"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499522.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YxeA family protein"
                     /protein_id="HDC2864759.1"
                     /translation="MKFIIAILLGLILSITIAFTIIHHPILDRFNPFLKTEYSYAKVP
                     KGTQQYVNITAYSERGEKLDYKLTFNGFSPSRTYVEIKHKGQYVISITYVEKEDTPKE
                     VRQE"
     gene            1300..1941
                     /locus_tag="O7798_002570"
     CDS             1300..1941
                     /locus_tag="O7798_002570"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499523.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HDC2864760.1"
                     /translation="MIELKDLTIQKGNTHILKKLNLKFQCGKSYALIGKSGCGKSTLL
                     NTIAGLEKTGKQYVYFNGQLEQFKSNFYRDKLGYLFQNYGLIDNLTVNENLDIGLAYK
                     KISKKEKEQIKIRYIEQFGLSNSLKRKVHTLSGGEQQRVALIRMMLKDPIVMLADEPT
                     GALDPKTGQMIIQSLFGLVDENKVLILATHDMAIANQCDEIIDLEQYRKVAYM"
     gene            complement(2029..2319)
                     /locus_tag="O7798_002571"
     CDS             complement(2029..2319)
                     /locus_tag="O7798_002571"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499524.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDC2864761.1"
                     /translation="MFYACHFKVKIGGVILTRTYNIIGILSCLISFIIMALPMIWYTA
                     SALWFFPGAIMILLLSLVIVFCYIKTKNQLHLLLIVLNIIILLFFSLPLLLS"
BASE COUNT          980 a          307 c          395 g          788 t
ORIGIN      
        1 atgattatta cacgattgaa tttgcacctt atcacgaaac aaaacaaagt ttgattgata
       61 atatggtgcg atcagaacaa ttagtaaagg ctagtgaagc agaaaataat gcgattttat
      121 tcaaaccaaa gggtgactcc gttgacaatg acaacttttc gcctgatgag gggaatgtaa
      181 tattagtaaa taatcagttc tggtcgattt attacaagca gtttcaacct gatattccga
      241 taaaaaatca aaaaaataat gtcgaagtaa ttattccaca aaagtttcat gcaatgcgta
      301 atgaaatcaa tcaagcatat cattcatggt ttgaatttgt acaaaataaa aataataaag
      361 agaataagtt atctatacag tttatcaaca aaaattattg tcgaattttt tcatttgatg
      421 cacgagatag tcgccatttg tcatttatag aggcgccaat cattgtgaat gttcaggcat
      481 cagatttatc gaatgatttt tattatgcca tgatcagtca aggcgggtat ttattcaaaa
      541 attatgacgc gctagtaaaa aatattgaaa agtatcatct tgatggggaa atcagtggaa
      601 taaccaatta taaagatagc gtgatggaaa tgtatcatga aaacaatttg aaattaacag
      661 tactcaactt ttcacaaatc attatcgcaa tcattttaat aattattatt ttatttgatg
      721 tgaaatatta ttttgaacag catcgaaaat tactcgtaat caaaaagcta tatggttatt
      781 caacattaag agccaattac caatacttat taataaataa tatagttgtt atttttattg
      841 gaatattgac gaatgtaatt ttacattctc actatataat gatgttattt gcaacgattc
      901 ttgtcgttca aatattattg cagatttgca gcctatacta tcatggccga cgttttaatg
      961 aagttatcaa ggagttttaa ctatgaaatt tatcattgca atattattag gattaatatt
     1021 atccattact attgctttta caatcataca tcatcctata cttgatcgtt ttaatccttt
     1081 cttaaaaacg gagtatagtt atgccaaagt gccaaaaggt acgcaacaat atgttaatat
     1141 tacggcttat agtgaaagag gggaaaagct tgattataaa ttaacattta atggattttc
     1201 acctagtaga acgtatgtcg aaataaagca taaagggcaa tatgtcatat cgatcacata
     1261 tgttgaaaaa gaggatacac caaaagaggt aagacaagaa tgatagaatt aaaagattta
     1321 accatacaaa aaggtaatac acatattttg aagaaactta atttgaaatt tcaatgtgga
     1381 aaatcatatg cacttattgg taaaagtgga tgcggtaaat ctacattatt aaatactatt
     1441 gctggacttg aaaaaacagg aaaacaatat gtctatttta atggtcaatt agaacaattt
     1501 aaatctaatt tttacagaga taaattagga tatttatttc aaaattatgg attaatcgat
     1561 aatttgacag taaatgaaaa tttagatatt ggattagcat ataaaaaaat aagtaagaaa
     1621 gaaaaagaac aaataaagat acgttatata gaacagtttg gtctgtcaaa cagtttaaaa
     1681 agaaaagttc atacgctaag tggaggtgaa caacaacgtg tcgctttaat tagaatgatg
     1741 ttaaaagatc cgattgttat gttagctgat gaaccaacgg gtgcgttaga tcctaaaaca
     1801 ggacagatga ttattcaatc attatttggt ttggtcgatg aaaataaagt gctgatttta
     1861 gcaacacatg atatggctat tgcaaatcaa tgtgacgaaa taatagattt agaacagtat
     1921 agaaaagtag catatatgtg atatccaaaa gataaaatta aaagccaatc aatgggaaat
     1981 gttgacttca acactccgtt tgattggctt ttatactgtg ttactaagtt atgaaagtaa
     2041 caacggcaaa ctgaaaaaaa gcaatataat aatatttaat acgattagta ataaatgtaa
     2101 ttgatttttc gttttaatat agcaaaaaac aatgactaaa gataacaaca atatcatgat
     2161 tgcacctggg aagaaccata atgctgaagc tgtgtaccaa atcattggta acgccataat
     2221 aataaaagat ataagacaag aaaggatacc aataatatta taagttctag tcaaaattac
     2281 acctccaatt ttcactttaa aatgacatgc gtaaaacaat cattttaaat acattataca
     2341 ataaaattaa attgtgcggt agaagaattt gaaattaaat tgaattgttt ttggtagttg
     2401 gtatatttat aacactctgc aaaagaatgt agcaaaatta gataaattag attatttaaa
     2461 attatgcgtg
//
LOCUS       DALPQQ010000203         2462 bp    DNA     linear   BCT 22-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus strain K18-6-464
            SAMD00233528-rid16434743.denovo.206, whole genome shotgun sequence.
ACCESSION   DALPQQ010000203 DALPQQ010000000
VERSION     DALPQQ010000203.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMD00233528
            Sequence Read Archive: DRR236061
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 2462)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2462)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001543423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001543423.1
            Genome Coverage       :: 77x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/22/2022 17:09:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,811
            CDSs (total)                      :: 2,743
            Genes (coding)                    :: 2,689
            CDSs (with protein)               :: 2,689
            Genes (RNA)                       :: 68
            rRNAs                             :: 2, 4, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 4, 2 (16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 54
            CDSs (without protein)            :: 54
            Pseudo Genes (ambiguous residues) :: 0 of 54
            Pseudo Genes (frameshifted)       :: 27 of 54
            Pseudo Genes (incomplete)         :: 27 of 54
            Pseudo Genes (internal stop)      :: 10 of 54
            Pseudo Genes (multiple problems)  :: 10 of 54
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2462
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMD00233528-rid16434743.denovo.206"
                     /strain="K18-6-464"
                     /db_xref="taxon:1280"
                     /geo_loc_name="Japan: Niigata"
     gene            complement(397..1131)
                     /gene="erm(C)"
                     /locus_tag="O7798_002572"
     CDS             complement(397..1131)
                     /gene="erm(C)"
                     /locus_tag="O7798_002572"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011282421.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA (adenine(2058)-N(6))-methyltransferase
                     Erm(C)"
                     /protein_id="HDC2864762.1"
                     /translation="MNEKNIKHSQNFITSKHNIDKIMTNIRLNEHDNIFEIGSGKGHF
                     TLELVQRCNFVTAIEIDHKLCKTTENKLVDHDNFQVLNKDILQFKFPKNQSYKIFGNI
                     PYNISTDIIRKIVFDSIADEIYLIVEYGFAKRLLNTKRSLALFLMAEVDISILSMVPR
                     EYFHPKPKVNSSLIRLNRKKSRISHKDKQKYNYFVMKWVNKEYKKIFTKNQFNNSLKH
                     AGIDDLNNISFEQFLSLFNSYKLFNK"
     gene            complement(1192..1251)
                     /gene="ermCL"
                     /locus_tag="O7798_002573"
     CDS             complement(1192..1251)
                     /gene="ermCL"
                     /locus_tag="O7798_002573"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002497446.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA methylase leader peptide ErmCL"
                     /protein_id="HDC2864763.1"
                     /translation="MGIFSIFVISTVHYQPNKK"
     gene            complement(1935..2411)
                     /locus_tag="O7798_002574"
     CDS             complement(1935..2411)
                     /locus_tag="O7798_002574"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000664727.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="replication/maintenance protein RepL"
                     /protein_id="HDC2864764.1"
                     /translation="MKERYGTVYKGSQRLIDEESGEVIEVDKLYRKQTSGNFVKAYIV
                     QLISMLDMIGGKKLKIVNYILDNVHLSNNTMIATTREIAKATGTSLQTVITTLKILEE
                     GNIIKRKTGVLMLNPELLMRGDDQKQKYLLLEFGNFEQEANEKQENALSDYYSFKD"
BASE COUNT          749 a          387 c          371 g          955 t
ORIGIN      
        1 aaaaaaaaaa gaacatttgt taaaagaaat tagaacaaaa tgagtgaaaa attagaacaa
       61 acaaattcct tataaacctt atcatctcaa cctatattaa gattttacct agttgaatct
      121 tcttttctat ataaagcgtc ggagcatatc agggggttat ctaacgtaaa tgctaccctt
      181 cggctcgctt tcgctcggca ttgacgtcag atactgcacc ccctgaaccc ccatgctcca
      241 acagcaaaaa ggaaactttt tgctgctttt ccgacgctta ttagcttcgc tcatatttat
      301 atagaaaaga agtgaatgcg caaaagacat aatcgattca caaaaaatag gtacacgaaa
      361 aacaagttaa gggatgcata aactgcatcc cttaacttac ttattaaata atttatagct
      421 attgaaaaga gataagaatt gttcaaagct aatattgttt aaatcgtcaa ttcctgcatg
      481 ttttaaggaa ttgttaaatt gattttttgt aaatattttc ttgtattctt tgttaaccca
      541 tttcataacg aaataattat acttctgttt atctttgtgt gatattcttg atttttttct
      601 atttaatctg ataagtgagc tattcacttt aggtttagga tgaaaatatt ctcttggaac
      661 catacttaat atagaaatat caacttctgc cattaaaaat aatgccaatg agcgttttgt
      721 atttaataat cttttagcaa acccgtattc cacgattaaa taaatctcat cagctatact
      781 atcaaaaaca attttgcgta ttatatccgt acttatgtta taaggtatat taccaaatat
      841 tttataggat tggtttttag gaaatttaaa ctgcaatata tccttgttta aaacttggaa
      901 attatcgtga tcaacaagtt tattttctgt agttttgcat aatttatggt ctatttcaat
      961 ggcagttacg aaattacacc tctgtactaa ttcaagggta aaatgccctt ttcctgagcc
     1021 gatttcaaag atattatcat gttcatttaa tcttatattt gtcattattt tatctatatt
     1081 atgttttgaa gtaataaagt tttgactgtg ttttatattt ttctcgttca ttataaccct
     1141 ctttaatttg gttataatga attttgctta ttaacgattc attataacca cttatttttt
     1201 gtttggttga taatgaactg tgctgattac aaaaatacta aaaatgccca tattttttcc
     1261 tccttataaa attagtataa ttatagcacg agctctgata aatatgaaca tgatgagtga
     1321 tcgttaaatt tatactgcaa tctgatgcga ttattgaata aaagatatga gagatttatc
     1381 tagtttcttt ttttacaaga aaaaagaaag ttcttaaagg ttttatactt ttggtcgtag
     1441 agcacacggt ttaacgactt aattacgaag taaataagtc tagtgtgtta gactttaatg
     1501 tttttttaag gcattagtgc atttaagcgt cagagcatgg ctttatgccg agaaaactat
     1561 tggttggaat ggcgtgtgtg ttagccaaag ctttggcgag ttggttgggg gtttcatggg
     1621 attaatccca tgaaagtacc aactcaacaa cacactaacg cctgttggtt ccaaccaata
     1681 ggaaattgga ataagcaatt agtataatgt tggtataacg ttagtataat gatgcttttt
     1741 ttcattatat tttttatgta ctttaaacct gcacgcttat gtgaattaga aaaagcttaa
     1801 tcgcatttca tagattgacc tcccaataac tacgtggtgt tattgggagg tcaatctatt
     1861 tcatttgcgt taagcttttg atctacatta agcgtgcagg ttttttgtct atttgtagac
     1921 gattttatgt tatactagtc cttgaaagaa taataatcag ataatgcatt ttcttgtttt
     1981 tcatttgcct cttgctcaaa gttcccaaat tcgagtaaga ggtatttttg tttttggtcg
     2041 tcgcctctca ttagtagttc agggtttaac attaatactc cagtttttct ttttataata
     2101 tttccttctt ctaagatttt aagtgttgtt attactgttt gtagacttgt tcctgtagct
     2161 tttgctattt ctcttgttgt agctatcatt gtattgttac ttaagtggac attatctagg
     2221 atatagttaa cgattttaag tttttttccg ccaatcatat ctaacatact tattaattgc
     2281 actatatatg cctttacgaa gttaccagac gtttgtttac ggtataactt gtctacctct
     2341 atgacttctc cactttcttc gtctatgagc ctctgagagc ctttatagac tgttccatat
     2401 ctttctttca tctttttctc actccttatt ttaaactatt ctaactatat cataactgtt
     2461 ct
//
LOCUS       DALPQQ010000204         2458 bp    DNA     linear   BCT 22-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus strain K18-6-464
            SAMD00233528-rid16434743.denovo.207, whole genome shotgun sequence.
ACCESSION   DALPQQ010000204 DALPQQ010000000
VERSION     DALPQQ010000204.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMD00233528
            Sequence Read Archive: DRR236061
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 2458)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2458)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001543423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001543423.1
            Genome Coverage       :: 77x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/22/2022 17:09:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,811
            CDSs (total)                      :: 2,743
            Genes (coding)                    :: 2,689
            CDSs (with protein)               :: 2,689
            Genes (RNA)                       :: 68
            rRNAs                             :: 2, 4, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 4, 2 (16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 54
            CDSs (without protein)            :: 54
            Pseudo Genes (ambiguous residues) :: 0 of 54
            Pseudo Genes (frameshifted)       :: 27 of 54
            Pseudo Genes (incomplete)         :: 27 of 54
            Pseudo Genes (internal stop)      :: 10 of 54
            Pseudo Genes (multiple problems)  :: 10 of 54
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2458
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMD00233528-rid16434743.denovo.207"
                     /strain="K18-6-464"
                     /db_xref="taxon:1280"
                     /geo_loc_name="Japan: Niigata"
     gene            <1..67
                     /locus_tag="O7798_002575"
     CDS             <1..67
                     /locus_tag="O7798_002575"
                     /inference="COORDINATES: protein motif:HMM:NF017210.1"
                     /note="Members of this family are produced with retention
                     of the N-formyl-methionine at the N-terminus; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="delta-lysin family phenol-soluble modulin"
                     /protein_id="HDC2864765.1"
                     /translation="ISTIGDLVKWIIDTVNKFTKK"
     gene            complement(664..1449)
                     /locus_tag="O7798_002576"
     CDS             complement(664..1449)
                     /locus_tag="O7798_002576"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500741.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbon-nitrogen family hydrolase"
                     /protein_id="HDC2864766.1"
                     /translation="MKVQIYQLPIVFGDSSKNETQITQWFEKNMNAEVDVVVLPEMWN
                     NGYDLEHLNEKADNNLGQSFSFIKHLAEKYKVDIVAGSVSNIRNNQIFNTAFSVNKSG
                     QLINEYDKVHLVPMLREHEFLTAGEYVAEPFQLSDGTYVTQLICYDLRFPELLRYPAR
                     SGAKIAFYVAQWPMSRLQHWHSLLKARAIENNMFVIGTNSTGFDGNTEYAGHSIVINP
                     NGDLVGELNESADILTVDLNLNEVEQQRENIPVFKSIKLDLYK"
     gene            complement(1810..2436)
                     /locus_tag="O7798_002577"
     CDS             complement(1810..2436)
                     /locus_tag="O7798_002577"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500740.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitroreductase family protein"
                     /protein_id="HDC2864767.1"
                     /translation="MGLFKKDKKAMTFDNAMEERRSIYNLKDSISISDDELESMIAHA
                     VKHVPSSFNSQSTRIVLLLNDNNNKFWDNTKAILKEVMGENRDFEPTEQKIDNFKHSY
                     GTILFYEDQDVVSGLQEQMPNYYDNFAIWSTQTNAMHQFAIWTALATKGIGASLQHYN
                     PLVDEMTSNEFNIPKSWKLIAQMPFGDIREAAGEKTFNPVEDRFVIKK"
BASE COUNT          827 a          410 c          351 g          870 t
ORIGIN      
        1 catttcaaca atcggtgact tagtaaaatg gattatcgac acagtgaaca aattcactaa
       61 aaaataagat gaataattaa ttactttcat tgtaaatttg ttatcttcgt atagtactaa
      121 aagtatgagt tattaagcca tcccaactta ataaccatgt aaaattagca agtgagtaac
      181 atttgctagt agagttagtt tccttggact cagtgctatg tatttttctt aattatcatt
      241 acagataatt atttctagca tgtaagctat cgtaaacaac atcgatttat cattatttga
      301 taaataaaat ttttttcata attaataaca tccccaaaaa tagattgaaa aaataactgt
      361 aaaacattcc cttaataata agtatggtcg tgagcccctc ccaagctcgc ggcctttttt
      421 gtaatgaaga agggatgagt taatcatcat tatgagaccc gccgttaaaa tatatgaata
      481 agtctaatgt tggaaaaggt caaaaaatta atcaatttaa ttaagaaaat cattcatttg
      541 caaagggcga aatgggttct tactgagtta tctattataa aaaaataaac atagacttat
      601 gaaaaatctc tcataaatct atgtttagtc atgacatgtg ttaaatatta tttcgggcgc
      661 ttcttattta tacaaatcta atttaatact tttaaataca ggtatatttt cgcgttgctg
      721 ttctacttca tttaagttta aatctacagt caaaatatct gcggattcat ttaattctcc
      781 aactaaatct ccatttgggt ttataactat cgaatgacca gcatattctg tgttaccatc
      841 gaatccagtg ctattagttc caatgacaaa catattattt tcaattgcac gtgcctttag
      901 taatgaatgc caatgttgaa gacgtgacat aggccattgc gccacataaa atgcaatttt
      961 agcaccacta cgagcaggat atcttaataa ttctggaaaa cgtaaatcat aacagataag
     1021 ttgggtcaca taagtaccgt cagacaattg aaagggttca gctacgtatt cgccagcggt
     1081 taaaaattca tgctctctta acataggaac taaatgaact ttgtcgtatt cattaatcag
     1141 ctggccactt ttattcacac taaaagctgt attaaatatt tgattgtttc taatgttaga
     1201 aactgaccca gctacgatat cgactttata tttttcagct aaatgtttaa taaatgaaaa
     1261 actttgtcct agattattat ctgctttttc atttaaatgc tctaaatcat agccattatt
     1321 ccacatttca ggtaaaacga ctacatctac ttcagcattc atattttttt cgaaccattg
     1381 cgttatttga gtttcatttt tagaactatc tccaaaaaca atcggtaatt gataaatttg
     1441 gactttcata acatcacatc cttgatagat cttatatata acttactaaa agttatgttg
     1501 aaacgcaaaa aacgagcaca agacataaaa tcaaagtcct aggctctaca aagttatatt
     1561 gacagtagtt gatggggccc caacatagag aaattggaac accaatttct acagacaatg
     1621 caagttgggg tgggctctaa cataaagaaa tactttttct ttagaaatta gtatttctta
     1681 tacatgagtt ttactcatgt attcctattc ttaagtgcac attagcagcg gctaatgtgt
     1741 aagaactact acataatgaa taactaatga ttctttatca tttctgtccc attcctaaca
     1801 atatattgat tattttttta ttacgaaacg atcttccact ggattaaatg ttttttcgcc
     1861 agcagcttca cgaatatcac caaatggcat ttgagcaata agtttccaac ttttaggaat
     1921 attaaattca tttgaagtca tctcatcaac aagtggatta tagtgttgta atgaagcacc
     1981 tatgccttta gtagctaatg cagtccaaat tgcaaattga tgcatggcat ttgtttgagt
     2041 tgaccatatt gcaaaattat catagtagtt tggcatttgt tcttgtaaac cacttacaac
     2101 atcttgatct tcataaaaca aaattgtacc gtatgaatgt ttgaagttat caattttttg
     2161 ttcagttggc tcgaaatcac gattctctcc catgacttct tttaaaattg cttttgtgtt
     2221 atcccaaaat ttattattgt tgtcatttaa caagagaaca attctagttg attgagaatt
     2281 aaatgatgaa ggaacatgtt taactgcatg tgcaatcatt gattctaatt cgtcatcgct
     2341 aattgatatc gaatctttca aattatatat tgaacgtctt tcttccattg cattgtcaaa
     2401 agtcattgct tttttatctt ttttaaataa gcccataatt attgctcctt ctttagta
//
LOCUS       DALPQQ010000205         2451 bp    DNA     linear   BCT 22-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus strain K18-6-464
            SAMD00233528-rid16434743.denovo.208, whole genome shotgun sequence.
ACCESSION   DALPQQ010000205 DALPQQ010000000
VERSION     DALPQQ010000205.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMD00233528
            Sequence Read Archive: DRR236061
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 2451)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2451)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001543423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001543423.1
            Genome Coverage       :: 77x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/22/2022 17:09:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,811
            CDSs (total)                      :: 2,743
            Genes (coding)                    :: 2,689
            CDSs (with protein)               :: 2,689
            Genes (RNA)                       :: 68
            rRNAs                             :: 2, 4, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 4, 2 (16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 54
            CDSs (without protein)            :: 54
            Pseudo Genes (ambiguous residues) :: 0 of 54
            Pseudo Genes (frameshifted)       :: 27 of 54
            Pseudo Genes (incomplete)         :: 27 of 54
            Pseudo Genes (internal stop)      :: 10 of 54
            Pseudo Genes (multiple problems)  :: 10 of 54
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2451
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMD00233528-rid16434743.denovo.208"
                     /strain="K18-6-464"
                     /db_xref="taxon:1280"
                     /geo_loc_name="Japan: Niigata"
     gene            complement(41..391)
                     /gene="scn"
                     /locus_tag="O7798_002578"
     CDS             complement(41..391)
                     /gene="scn"
                     /locus_tag="O7798_002578"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500655.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="complement inhibitor SCIN-A"
                     /protein_id="HDC2864768.1"
                     /translation="MKIRKSILAGTLAIVLASPLVTNLDKNEAQASTSLPTSNEYQNE
                     KLANELKSLLDELNVNELATGSLNTYYKRTIKISGQKAMYALKSKDFKKMSEAKYQLQ
                     KIYNEIDEALKSKY"
     gene            complement(902..1237)
                     /locus_tag="O7798_002579"
                     /pseudo
     CDS             complement(902..1237)
                     /locus_tag="O7798_002579"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500032.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="SH3 domain-containing protein"
     gene            complement(1888..2379)
                     /gene="sak"
                     /locus_tag="O7798_002580"
     CDS             complement(1888..2379)
                     /gene="sak"
                     /locus_tag="O7798_002580"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500658.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="staphylokinase"
                     /protein_id="HDC2864769.1"
                     /translation="MLKRSLLFLTVLLLLFSFSSITNEVSASSSFDKGKYKKGDDASY
                     FEPTGPYLMVNVTGVDGKGNELLSPHYVEFPIKPGTTLTKEKIEYYVEWALDATAYKE
                     FRVVELDPSAKIEVTYYDKNKKKEETKSFPITEKGFVVPDLSEHIKNPGFNLITKVVI
                     EKK"
BASE COUNT          823 a          423 c          342 g          863 t
ORIGIN      
        1 tatctagaaa attaaaacca cccttttacg ggtggttttt ttaatattta ctttttagtg
       61 cttcgtcaat ttcattataa atcttttgaa gttgatattt tgcttctgac attttcttaa
      121 agtcttttga cttaagagca tacattgctt tttgacctga aatttttata gttcgcttat
      181 aataagtgtt taaacttcca gtagctaatt cattaacatt tagttcatct aataacgatt
      241 ttaattcatt agctaacttt tcgttttgat attcattcga tgttggcaag cttgtgctag
      301 cttgtgcctc atttttatct agattagtta ctagtggtga tgctaaaacg attgctaaag
      361 ttcccgcaag tatagatttt ctaattttca ttttttattc tccttagtaa ttagtactaa
      421 tttattttaa tgactaacta aaaaaaagta cattaattat tcattaacta tatagatctt
      481 cttattaaat gaaaattaat aaattatcaa attgacatac cttattgtat ttatagaaaa
      541 acaaaaaaag gtaagcaccg aaatgcttac ctacttccca taaacaatat aacacatata
      601 cattgatttg gaaagcgcaa aaataaattt aatatactag cccgaagggg agcaatacat
      661 aaaaaatgaa aggcgctcct tgaaaacgcc caaggtaata ttaacataaa atggctacta
      721 ttgcattatc taattttatt taattaaaac aaatatatag cacaaaaaaa ctagcccgaa
      781 ggctagctta tgaatagatg aaaatttgaa cacattgctg tgtctaaaat gattatagca
      841 taatttcaaa ctattctata ataaattaat taacttcata tgaaacttta cacacttttt
      901 ttcaaagtgc gctaaaatta ccaaaactgc ttattctatt acctgccttg tctacctctc
      961 ctgtcgctat ataacaacgt tgtccattat tagcaatata agtaatccat ctatagccat
     1021 taatgcaata tgcgccgtca tatttgatcg ttgcgttatt gggtaataca cctgtaattc
     1081 ttgaattagt tgaatagcca tccctcacgt tattaccttt aacattggca actgtgtaat
     1141 aaccagtctc ttttttatac ggtacattgt ttttatcgag tgtataacct gctggcactg
     1201 gtgaattctt ttcattttta gctggtgttt taacattact gatacctgat acacacttcc
     1261 aataaaaata accacaccat ttaagatgcg gtgtagcgac tgtaatattt ctatgttgtt
     1321 gagatatatg tatcgagtga agggcaaaaa ggatatcaat tgcaggataa gtgttaggtt
     1381 actaggccac ttaacaggct atatagttca ctcctactat atacacttaa ttataacata
     1441 aaaagcaccc cgtaaactat tatacgggaa tgctaaagtc atatatacta cgggggagta
     1501 gtatgaaaac catgctctct atcataagaa aaaaacaccc agtgacatgc ttgggtgaac
     1561 aaggatagat gtaaatagtt gatgcatgtg taacacatca tagcaaaaaa ctagcccgaa
     1621 agctagctat aacatacaat ctaaaaagac gtcctttgaa tacgtctaga aagattataa
     1681 cataaaaaaa taggcaagta ccgaagtacc tgcctaaaaa aggattatcc actttttcat
     1741 cctaactgat ttctccccat aagtcaccta atatctgatt aggtggggaa gaaccattcg
     1801 tgcatgaatg agaatttgat gaaagataat tttcactaca catattcaat caagacattg
     1861 ctttctataa taaacaacta ttttgtttta tttcttttct ataacaacct ttgtaattaa
     1921 gttgaatcca gggtttttaa tatgctctga taaatctggg acaacaaaac ctttttctgt
     1981 tatagggaaa gacttcgttt cttctttttt cttattctta tcataataag tgacttcgat
     2041 ctttgcgctt ggatctaatt caactactct aaactcttta tatgctgtcg catctaatgc
     2101 ccattcgaca tagtattcaa ttttttcttt tgtaagtgta gtcccaggtt taataggaaa
     2161 ctcgacataa tgaggggata gcaattcatt tcctttacca tcaactccag tcacatttac
     2221 catcaaatac gggcctgttg gttcaaaata actcgcgtca tcgccttttt tatattttcc
     2281 tttgtcgaat gaacttgatg cacttacctc attagtaatt gaagaaaatg agaataataa
     2341 caataaaaca gttaaaaata ataaacttct tttgagcatg gcgcttcctc caaatataat
     2401 atatttgttt ttatttatct ctttttatag ctaacaccct tatttaagat g
//
LOCUS       DALPQQ010000206         2440 bp    DNA     linear   BCT 22-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus strain K18-6-464
            SAMD00233528-rid16434743.denovo.209, whole genome shotgun sequence.
ACCESSION   DALPQQ010000206 DALPQQ010000000
VERSION     DALPQQ010000206.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMD00233528
            Sequence Read Archive: DRR236061
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 2440)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2440)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001543423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001543423.1
            Genome Coverage       :: 77x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/22/2022 17:09:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,811
            CDSs (total)                      :: 2,743
            Genes (coding)                    :: 2,689
            CDSs (with protein)               :: 2,689
            Genes (RNA)                       :: 68
            rRNAs                             :: 2, 4, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 4, 2 (16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 54
            CDSs (without protein)            :: 54
            Pseudo Genes (ambiguous residues) :: 0 of 54
            Pseudo Genes (frameshifted)       :: 27 of 54
            Pseudo Genes (incomplete)         :: 27 of 54
            Pseudo Genes (internal stop)      :: 10 of 54
            Pseudo Genes (multiple problems)  :: 10 of 54
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2440
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMD00233528-rid16434743.denovo.209"
                     /strain="K18-6-464"
                     /db_xref="taxon:1280"
                     /geo_loc_name="Japan: Niigata"
     gene            113..2392
                     /gene="secDF"
                     /locus_tag="O7798_002581"
     CDS             113..2392
                     /gene="secDF"
                     /locus_tag="O7798_002581"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500252.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein translocase subunit SecDF"
                     /protein_id="HDC2864770.1"
                     /translation="MKKSSRIIAFLLLVVLLFAGMAATYKSVIKNVNLGLDLQGGFEV
                     LYQVDPLNKGDKIDKKALQSTAQTLENRVNVLGVSEPKIQVEEPNRIRVQLAGVTDQN
                     EARKILSSQANLTIRDAEDKVKLSGSDIKQGSAKQEFKQETNQPTVTFKVKDKNKFKK
                     VTEEISKKRDNVMVVWLDFKKGDSYKKEAQKKNPKFISAASVDQPINSDSVEISGGFK
                     GQEGVKKAKQIAELLNAGSLPVDLKEIYSNSVGAQFGQDALDKTVFASFIGVALIYLF
                     MLGFYRLPGLVAIIALTTYIYLTLVAFNFISGVLTLPGLAALVLGVGMAVDANIIMYE
                     RIKDELRIGRTIKQAFSKANKSSFLTIFDSNLTTVIAAAVLFFFGESSVKGFATMLLL
                     GILMIFVTAVFLSRFLLSLLVSSNIFKNQFWLFGVKKNKRHDINEGVDVHDLKTSFEK
                     WNFVKLAKPLIGVSILIVVVGLVILYIFKLNLGIDFSSGTRVDFQSKQAITQQKVEQV
                     VKDSGLKADQIQINGKDNKVATVQFKDDLTRAQDNKLSDNIKSKFGDTPQINTVSPII
                     GQELAKNAMLALIYASIGIIIYVSLRFEWRMGLSSVLALLHDVFIIVAIFSLFRIEVD
                     LTFIAAVLTIVGYSINDTIVTFDRVRENLQKVKVITTTEQIDDIVNRSIRQTMTRSIN
                     TVLTVIVVVVAILFFGAPTIFNFTLALFIGLISGVFSSIFIAVPLWGIMKKRQLKKSP
                     KHKLVVYKEKKSNDEKILV"
BASE COUNT          865 a          346 c          442 g          787 t
ORIGIN      
        1 tctagtatgt taatatgtat aaggctaata aattttgtaa gaaagattta acttgcgtta
       61 taaaatagta ttcaagtatt ctaaatacat acgtaaataa tgaggtgttc atgtgaagaa
      121 aagtagtaga ataattgcgt tcttgctttt agtcgtattg ttgtttgccg gaatggctgc
      181 aacttataaa agtgttataa agaatgtcaa tttaggactt gatttgcaag gtggatttga
      241 ggtgctttat caagtcgatc ctttaaataa aggcgacaaa atagataaaa aagccttaca
      301 atcaacagcg caaacattag aaaatcgtgt taacgtttta ggtgtttcgg aacctaaaat
      361 tcaagttgaa gaacctaata gaattagagt acaacttgct ggtgtaacag accagaatga
      421 agcacgtaaa attttatctt ctcaagctaa tttaacaatt cgcgatgcag aagataaagt
      481 aaaattaagc ggttctgata ttaaacaggg atctgccaaa caagaattta aacaggagac
      541 aaaccagcct acagttactt ttaaagtaaa agacaaaaac aaatttaaaa aagtaacgga
      601 agaaatctct aagaaacgtg ataatgtcat ggttgtttgg ttagatttca aaaaaggtga
      661 cagctataaa aaagaagcac aaaagaaaaa ccctaaattt atttctgcag caagtgttga
      721 tcaaccaatc aattctgata gcgtagaaat ctcgggtgga tttaaaggac aagaaggcgt
      781 taaaaaagca aaacaaatcg ccgaattgtt aaatgcaggt tctttaccag ttgacttgaa
      841 agaaatttat tcaaactcag taggtgccca atttggtcaa gatgcattag ataaaactgt
      901 gtttgcatcg tttattggtg tagcattaat ttatttattc atgcttggat tctaccgatt
      961 acctggttta gtagcgatta ttgcattgac aacttatatc tatctaacgt tagtagcatt
     1021 taatttcatt tccggggttc taactttacc aggattagcg gcgttggtat taggtgtagg
     1081 tatggctgta gatgccaata ttatcatgta tgagcgtatt aaggatgaac ttcgaatagg
     1141 tagaacgata aagcaagcct tttctaaagc aaacaaaagt tcattcctaa caatttttga
     1201 ttctaactta acaacagtta tcgccgcagc agtattattc ttcttcggtg aaagttcagt
     1261 taaaggtttc gcgacaatgt tattattagg tattctaatg atctttgtta cagccgtgtt
     1321 cttatcaaga ttcttattat cattacttgt ttcatcaaat atattcaaaa atcaattttg
     1381 gttatttggt gttaaaaaga ataaacgaca tgatattaat gaaggtgtag atgttcatga
     1441 ccttaaaact tcattcgaga aatggaattt tgttaaatta gctaagccat taattggagt
     1501 aagtatttta attgtagttg tcggtttagt tattctttat atcttcaagt taaacttagg
     1561 aattgatttc tcaagtggta cacgcgtaga tttccaatct aaacaagcaa ttactcaaca
     1621 aaaggtagag caagttgtaa aagatagtgg acttaaagcg gatcaaattc agatcaatgg
     1681 taaagacaat aaagtagcaa ctgttcaatt taaagacgat ttaacgcgtg ctcaagataa
     1741 taaattgagt gataatatta aatcgaaatt cggtgacaca cctcaaatta acactgtatc
     1801 accaattatt ggacaggaat tagcaaaaaa tgcaatgctt gcattaatct atgcatcgat
     1861 aggtatcatc atctatgtat cattacgatt tgaatggcgc atgggtcttt catctgtatt
     1921 ggcattatta catgatgtat tcattatagt agcgattttc agtttattta gaattgaagt
     1981 agatttaaca tttatcgccg ctgtattaac aattgtcggt tattcaatta atgatacaat
     2041 cgtaacgttt gaccgtgtac gcgaaaactt acaaaaggtt aaagtgatta cgacaacaga
     2101 acaaattgat gatatcgtta atagatcaat tagacagaca atgacacgtt caattaatac
     2161 agtattaaca gttattgtag tagtagttgc tatactattc ttcggtgctc ctacgatatt
     2221 caactttact ttagcattat ttatcggatt gatttctggt gtattctctt caatcttcat
     2281 tgccgttccg ctatggggaa taatgaaaaa acgtcagttg aaaaaatcgc cgaaacacaa
     2341 attagttgta tataaagaaa agaaatcgaa cgatgaaaag attttagttt aaaatgaatt
     2401 aagcggtatg tgaaacaata aagagttcac ataccgcttt
//
LOCUS       DALPQQ010000207         2204 bp    DNA     linear   BCT 22-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus strain K18-6-464
            SAMD00233528-rid16434743.denovo.211, whole genome shotgun sequence.
ACCESSION   DALPQQ010000207 DALPQQ010000000
VERSION     DALPQQ010000207.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMD00233528
            Sequence Read Archive: DRR236061
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 2204)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2204)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001543423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001543423.1
            Genome Coverage       :: 77x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/22/2022 17:09:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,811
            CDSs (total)                      :: 2,743
            Genes (coding)                    :: 2,689
            CDSs (with protein)               :: 2,689
            Genes (RNA)                       :: 68
            rRNAs                             :: 2, 4, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 4, 2 (16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 54
            CDSs (without protein)            :: 54
            Pseudo Genes (ambiguous residues) :: 0 of 54
            Pseudo Genes (frameshifted)       :: 27 of 54
            Pseudo Genes (incomplete)         :: 27 of 54
            Pseudo Genes (internal stop)      :: 10 of 54
            Pseudo Genes (multiple problems)  :: 10 of 54
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2204
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMD00233528-rid16434743.denovo.211"
                     /strain="K18-6-464"
                     /db_xref="taxon:1280"
                     /geo_loc_name="Japan: Niigata"
     gene            complement(311..1318)
                     /locus_tag="O7798_002582"
     CDS             complement(311..1318)
                     /locus_tag="O7798_002582"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="inorganic phosphate transporter"
                     /protein_id="HDC2864771.1"
                     /translation="MSYIIIVTIAVVIFSLIFDFINGFHDTANAVATAVSTRALTPKT
                     AILMAAVMNFIGALTFTGVAGTITKDIVDPFKLENGLVVVLAAILAAIIWNLATWFYG
                     IPSSSSHALIGSIAGAAIASEGSFGVLHYQGFTKIIIVLIVSPIIAFCVGFLMYSIFK
                     VIFKNANLTRANRNFRFFQIFTAALQSFSHGTNDAQKSMGIITLALIVANVQNDGSVE
                     PQLWVKFACATAMGLGTAIGGWKIIKTVGGNIMKIRPANGAAADLSSALTIFVASSLH
                     FPLSTTHVVSSSILGVGASNRAKGVKWSTAQRMIITWVITLPISALLAGLLFYILNLF
                     F"
     gene            complement(1334..1951)
                     /locus_tag="O7798_002583"
     CDS             complement(1334..1951)
                     /locus_tag="O7798_002583"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499228.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF47 domain-containing protein"
                     /protein_id="HDC2864772.1"
                     /translation="MFSKKKDKFMVQLEEMVFNLDRAAIEFGKMDFNTHLDLKAYSDN
                     IKTYESHGDELVHQVITDLNQTFITPIEREDILSLCDAIDDVLDAIEETAAMFEMYSI
                     EYTDEYMAEFVDNIQKAVAEMKLAVGLLVDKKLSHMRIHSINIKEFETNCDGILRQSI
                     KHIFNSETDPITLIKIKDIYESMEEIADKCQIVANNFETIIMKNS"
BASE COUNT          764 a          392 c          300 g          748 t
ORIGIN      
        1 catatacaaa tttatattaa ataaagccca atacaattta ggttaattaa acaagttgat
       61 aactatttaa ttattccttc attgaagaat ataaaccatt aaatcattat tttgctctta
      121 catatatttt aatgacctaa ctgattatgt tccatggaat acatttataa tatagcctcc
      181 taattaaaat gctttgtctt ggtcattcta cgtaaattct ataaaatatg ttatctactt
      241 acataaaaaa ctgaacttca ataccaccat atgtttgtga tactgaagtt cagtttagtt
      301 ttattttcaa ttagaaaaat aagttaagta tatagaatag taaacctgct aacaatgctg
      361 aaataggtaa tgtaatcacc catgtaatga tcattcgttg cgcagtgctc cattttacac
      421 ctttagctcg gttagaagca ccaacaccta agattgatga tgacacaacg tgagttgttg
      481 ataatgggaa atgtagcgat gatgcaacaa aaattgttaa tgcagatgat aaatcggccg
      541 cagcaccatt tgctggacgt attttcataa tattaccacc tacagttttg ataattttcc
      601 agccaccaat tgcagtacca agccccattg ctgtcgcaca ggcaaatttt acccataact
      661 gtggttcaac actgccatca ttctgtacat tagcgacaat caatgccaac gtaataatac
      721 ccattgattt ttgcgcatca ttcgtaccgt gagagaatga ttgtaacgct gctgtgaaaa
      781 tttggaaaaa tctaaagtta cgattcgctc ttgttaaatt tgcattttta aagataactt
      841 taaaaattga atacatcaag aaaccaacac aaaatgcgat aatcggtgaa acgattaata
      901 caataataat ttttgtgaaa ccttggtaat gtaacactcc aaatgagcct tcagatgcga
      961 ttgctgcacc cgcaattgaa cctataagtg catgtgaaga cgaacttgga attccgtaaa
     1021 accaagtagc taaattccaa ataatagccg caagtattgc agctaacaca acaactaatc
     1081 cattttccaa tttaaatgga tcgacaatgt ctttagtaat ggtgcctgca acgcccgtaa
     1141 atgttaaagc acctataaag ttcatcactg ctgccattaa aattgccgtt ttaggcgtta
     1201 acgctctagt agatacagca gtagctactg cattggctgt atcatggaat ccattgataa
     1261 agtcaaatat cagcgagaaa ataactacag ctatagtgac gatgattata tatgacataa
     1321 atatatactc cccttagcta tttttcataa taatagtttc aaaattattt gctacgattt
     1381 gacatttatc agcgatttct tccatgcttt cataaatatc ttttatttta attaaagtga
     1441 ttggatctgt ttcgctattg aaaatatgtt taattgactg tcttaaaata ccatcacagt
     1501 ttgtttcaaa ttctttaata ttaattgaat gaatacgcat atgtgataat tttttatcga
     1561 ctaataagcc gacagcaagt ttcatttctg caactgcttt ttgaatgtta tcaacaaact
     1621 cagccatata ttcatctgtg tattcgattg aatacatttc aaacatagct gccgtttctt
     1681 caattgcatc taaaacatca tcaattgcat cacataatga taaaatatct tcacgttcaa
     1741 ttggtgtgat aaatgtttga tttaaatcag taattacttg atgtactaat tcgtcaccat
     1801 gtgactcata agttttaatg ttgtctgagt atgcttttaa atctaaatgt gtattgaaat
     1861 ccattttacc gaattcaata gcagcacgat ccagattgaa aaccatctct tctaattgaa
     1921 ccataaactt atcttttttc ttactaaaca tttaaaatcc tccatttaag cgattgtcac
     1981 caatcacatt cagttataat ttgtttcaaa ttaagacaag tgaatttaca aactaatgat
     2041 acaaatttgt tattatcaat cgtcagtata attttagtgt actgatatta atttcaaaaa
     2101 tgcctcacag taaacaattt actgtatttg cccttatatg aaaatagcac aaaatttaca
     2161 atcccacaat tcaatttaca aatttttaac aattccgaaa ctta
//
LOCUS       DALPQQ010000208         2194 bp    DNA     linear   BCT 22-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus strain K18-6-464
            SAMD00233528-rid16434743.denovo.212, whole genome shotgun sequence.
ACCESSION   DALPQQ010000208 DALPQQ010000000
VERSION     DALPQQ010000208.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMD00233528
            Sequence Read Archive: DRR236061
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 2194)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2194)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001543423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001543423.1
            Genome Coverage       :: 77x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/22/2022 17:09:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,811
            CDSs (total)                      :: 2,743
            Genes (coding)                    :: 2,689
            CDSs (with protein)               :: 2,689
            Genes (RNA)                       :: 68
            rRNAs                             :: 2, 4, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 4, 2 (16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 54
            CDSs (without protein)            :: 54
            Pseudo Genes (ambiguous residues) :: 0 of 54
            Pseudo Genes (frameshifted)       :: 27 of 54
            Pseudo Genes (incomplete)         :: 27 of 54
            Pseudo Genes (internal stop)      :: 10 of 54
            Pseudo Genes (multiple problems)  :: 10 of 54
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2194
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMD00233528-rid16434743.denovo.212"
                     /strain="K18-6-464"
                     /db_xref="taxon:1280"
                     /geo_loc_name="Japan: Niigata"
     gene            20..226
                     /locus_tag="O7798_002584"
     CDS             20..226
                     /locus_tag="O7798_002584"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499284.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDC2864773.1"
                     /translation="MIIVYIVLLLILVYVNYRLVNRLLSENRIYVVRLIATITTVISF
                     ILVYALIHELMPFVVRAMDLMYHQ"
     gene            314..1024
                     /locus_tag="O7798_002585"
     CDS             314..1024
                     /locus_tag="O7798_002585"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499285.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="allophanate hydrolase subunit 1"
                     /protein_id="HDC2864774.1"
                     /translation="MKIYSQGDQAIVVAIEKEVSKSLTEDLLTLRSYLIEQNYPFIIE
                     IVPSESDMMIVYDARDMIKHHNIQSPFLYMKALIESIHLNIKHDFNQQDLIEIPIVYG
                     SKYGPDLESLLKHYKIKLETFIELHSKAQYFVSMMGYSPGFPYLTGLNKKLYINHTSK
                     QKKFIPAGSVVLEGKKCGIVTTDTINDWLVIGYTPLSLFNPKESDFARLKLGDNIKFR
                     PINENELEVGAFKDVNHN"
     gene            1008..2012
                     /locus_tag="O7798_002586"
     CDS             1008..2012
                     /locus_tag="O7798_002586"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499286.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="biotin-dependent carboxyltransferase family
                     protein"
                     /protein_id="HDC2864775.1"
                     /translation="MSIIIEKSGLFSSFQDFGRRGYEHDGVIPCGALDTLAHEIANRL
                     VANDKNEATLEMTNKMATIRFTEPTLIALAGGNVKAYTEHMTISPYKLYLLDKGDVLK
                     FRETSYTSRVYLAVGGGFELDAWLGSNSTDFNVKIGGFKGRTLQDGDEIKLKRDYTAR
                     HHKLFENLAHTKQTDWGIDGYALSFNYMSDVFHVVKNKGTEDFKEDAIQRFVKHDYKV
                     TSKANRMGMMLEGEKIKAFYEDMPPYQTVKKGTIQIKRDGTPIILLNDHYTLGSYPQI
                     GTIASYHLTKLAQKPQGSRLKFQFIDILTAEKNLVKYSNWLNQLFHGIEYRMQLEMMK
                     "
BASE COUNT          797 a          299 c          397 g          701 t
ORIGIN      
        1 aaattaaatg gggccaaata tgattattgt ttatattgtg ctgttgttaa ttcttgtata
       61 cgtaaattat cgattagtga atcgattgct atctgaaaat agaatatatg ttgttcgttt
      121 gatagcaaca attactactg ttataagctt tatccttgta tacgcattaa ttcacgaact
      181 tatgcctttt gttgtgcggg caatggattt aatgtaccac cagtaaattt agtgagtagg
      241 taaaatgaac tattcaatcg attctataat taaaaatgaa agtaaagtaa ccaaatattg
      301 aagaggtgta caaatgaaaa tatatagtca aggtgaccaa gccattgtag tcgcaattga
      361 aaaagaagta tctaaaagtt taaccgaaga tttattaaca cttcgctcat atttaattga
      421 acaaaattat ccatttatta tagaaattgt gccatcagaa tcagacatga tgattgtcta
      481 tgacgcaagg gatatgatta aacaccataa tatacaatca ccttttttat acatgaaagc
      541 actaatagaa tcgattcatt taaacataaa acatgatttt aaccagcaag atttgattga
      601 aataccaatt gtgtatggtt cgaaatatgg tccggattta gaatcacttt taaaacatta
      661 caaaatcaag ctagaaactt ttattgaatt acattctaag gcgcaatatt ttgtttcgat
      721 gatgggatat tcacctgggt ttccttattt aactggatta aataagaaat tgtatattaa
      781 tcacacgagt aaacagaaaa aattcattcc agctggttct gtagtacttg aagggaaaaa
      841 atgcggtatt gtaactacgg atacaattaa tgattggtta gttattggtt atacaccatt
      901 atcacttttt aatccgaaag aatcagattt cgcacgctta aagttaggcg ataatattaa
      961 atttagacct atcaatgaaa atgaattaga agtaggagcg tttaaagatg tcaatcataa
     1021 ttgaaaaaag tggcttattc agtagctttc aggactttgg cagaagggga tatgaacatg
     1081 atggtgtaat tccatgtggt gcacttgata ctttagcaca tgaaattgct aatcgattag
     1141 ttgcaaatga caagaatgaa gcaactttgg aaatgactaa taaaatggca acgattcgtt
     1201 ttacagaacc tacgctgatt gcattagcag ggggtaatgt caaagcttac actgagcata
     1261 tgactatatc tccatataaa ttgtatttgt tagataaagg cgatgtttta aagtttagag
     1321 aaacaagtta tacatcgcga gtgtatttag ctgtgggagg cggatttgaa ttagatgcat
     1381 ggttaggatc taactcaacc gactttaatg taaaaattgg tggttttaaa ggtagaacat
     1441 tacaagatgg cgatgaaata aagcttaaga gagattatac agctcgtcat cataagttat
     1501 ttgaaaacct tgctcacacg aaacaaacag attggggtat tgatggatac gccttgtcat
     1561 ttaattatat gtctgatgta tttcatgtcg ttaaaaataa aggtacggaa gattttaaag
     1621 aagatgccat tcaaagattt gtgaaacatg attataaagt aacgagcaaa gcaaatcgca
     1681 tggggatgat gcttgaaggt gaaaaaatca aagcttttta tgaagatatg ccaccgtatc
     1741 agactgtcaa aaaaggaacg atacaaatta agcgtgatgg cacacctatt atcctattaa
     1801 atgatcatta tacgctaggt agctacccgc aaatcggtac aatcgcaagt tatcatttaa
     1861 cgaaattagc acaaaaaccg caaggatcac gtttgaaatt tcaatttata gatattttaa
     1921 cggctgaaaa gaaccttgtt aagtatagta actggttaaa ccaattattc catggaatag
     1981 aatatagaat gcaattagaa atgatgaaat aatatttggt acgtagctca tactcgagtc
     2041 cgatgcaaat aatttcctcc taatgtataa tgaaataata ctgtgtttta tctgcgaaat
     2101 gtatcatttt ctaattcgtt tcacagtaaa atgaaaagat aaagtgtgtt tttacttgaa
     2161 ttttgactaa aattactcta tatttattaa ttga
//
LOCUS       DALPQQ010000209         2158 bp    DNA     linear   BCT 22-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus strain K18-6-464
            SAMD00233528-rid16434743.denovo.213, whole genome shotgun sequence.
ACCESSION   DALPQQ010000209 DALPQQ010000000
VERSION     DALPQQ010000209.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMD00233528
            Sequence Read Archive: DRR236061
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 2158)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2158)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001543423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001543423.1
            Genome Coverage       :: 77x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/22/2022 17:09:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,811
            CDSs (total)                      :: 2,743
            Genes (coding)                    :: 2,689
            CDSs (with protein)               :: 2,689
            Genes (RNA)                       :: 68
            rRNAs                             :: 2, 4, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 4, 2 (16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 54
            CDSs (without protein)            :: 54
            Pseudo Genes (ambiguous residues) :: 0 of 54
            Pseudo Genes (frameshifted)       :: 27 of 54
            Pseudo Genes (incomplete)         :: 27 of 54
            Pseudo Genes (internal stop)      :: 10 of 54
            Pseudo Genes (multiple problems)  :: 10 of 54
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2158
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMD00233528-rid16434743.denovo.213"
                     /strain="K18-6-464"
                     /db_xref="taxon:1280"
                     /geo_loc_name="Japan: Niigata"
     gene            <1..807
                     /locus_tag="O7798_002587"
     CDS             <1..807
                     /locus_tag="O7798_002587"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499841.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HDC2864776.1"
                     /translation="LIGKNGAGKSTLIDILIGNVNANSGEIFDKDKLLQSENRSIMFQ
                     KTMFPDQLKVIEIINLYQSFYENPLPLEEIIELTKFDSSQLNQFVNKLSGGQQRLLDF
                     VLSLIGQPQLILLDEPTSTMDIEIREYFWSIIENLKEDNRTILYTSHYIEEVERMSDK
                     IILIENGEIILNDSTSHIRTNQQSQITLSDEYIRKLKLDKDDLVIQKNHNGTIKIITS
                     NVNDTILYLQQLHINLDDIEIQKVSIVDSYFNNKKQRGSNYDTKLLENRI"
     gene            776..1507
                     /locus_tag="O7798_002588"
     CDS             776..1507
                     /locus_tag="O7798_002588"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499842.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HDC2864777.1"
                     /translation="MILSYLKIEFKVIMRKKTTLILSILFPVIFYILFTSILELPEDV
                     KPKFYKEYMYSMTVYSLLSFSLLTFPLDIINEKQNEWRQRLMVTPFTFTSYYISKVVK
                     TMLQFAIAILVIFMVGHFYKGVAMSAVQWLESGIFLWLGASLLITFGILFSLLNDIQK
                     TSALANIVTIGLAVLGGLWFPINTFPNWLQHVAHVLPSYHLRKLGVDIASNHHINLIS
                     FAIILLYALGSIIAVYCISHFKRAE"
     gene            1511..>2158
                     /locus_tag="O7798_002589"
     CDS             1511..>2158
                     /locus_tag="O7798_002589"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499843.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sensor histidine kinase"
                     /protein_id="HDC2864778.1"
                     /translation="MKFLKDTSIAEISSILYLIFPIAGIFFNEVYGPKWLYIISVIVF
                     SLSYLILVIVNNRLNTLMFYILLIIHYFIICYFVFSVHPMLSLFFFYSAFAVPFTFKN
                     NVKKTATNLFILTMIICTIITYLLYNNYFVAMMVYYVVISLIMLDNFKKMKNREYQKE
                     IAEKNRHINTLIAEQERHRIGQDLHDTLGHVFASLSLKSELAYKLIDADVEKIKAE"
BASE COUNT          787 a          261 c          320 g          790 t
ORIGIN      
        1 ttaattggaa aaaatggtgc tggaaagtca acgttaattg atatattaat tggtaatgtt
       61 aatgctaatt ctggtgagat atttgataaa gacaagttat tacaaagtga aaatcgcagt
      121 ataatgttcc aaaaaacgat gtttccagat caattaaaag ttattgagat tatcaactta
      181 tatcaatcat tttacgaaaa tccattacca ttggaagaaa taatagaact gacgaaattt
      241 gattctagtc aactgaacca atttgtaaat aaactttctg gtggtcaaca acgattactc
      301 gattttgtat tatctttaat cggacaacca caattgatct tattagatga accaacatcg
      361 actatggata tagaaattag agaatatttt tggtcaatta ttgaaaattt aaaagaagat
      421 aatcgaacga tactctatac atcgcactat attgaagaag tcgaacgtat gtcagacaaa
      481 attattctca ttgaaaatgg agaaataata cttaatgatt caacgtcaca tattagaacc
      541 aatcagcaat ctcagattac gttatccgat gaatatataa gaaagttaaa actagataaa
      601 gatgatttag ttattcaaaa aaatcataat ggcactatca aaattattac ttcaaatgta
      661 aatgatacga ttttatatct tcaacaactt catattaatt tggatgatat tgaaatacaa
      721 aaagtctcaa ttgttgattc atacttcaac aataaaaagc aaaggggatc taattatgat
      781 actaagttac ttgaaaatcg aatttaaagt tataatgcgt aaaaaaacaa cattaatatt
      841 atctatttta tttcctgtta tattctatat attatttact tcgatattgg aattgccgga
      901 agatgttaaa cctaaatttt ataaagagta tatgtatagt atgacggttt atagtttgtt
      961 aagttttagt ttactaactt ttccattaga tattattaat gaaaaacaaa atgaatggcg
     1021 ccaaagatta atggtaacac catttacttt tactagttat tatatttcaa aagtagtgaa
     1081 aactatgctg caatttgcaa tagcgatatt agttattttt atggttggac atttttataa
     1141 aggtgttgca atgagtgcag ttcaatggtt agagtcagga atatttttat ggttaggtgc
     1201 gtctctatta ataacttttg gcatattatt ttctttgtta aatgatattc aaaaaacaag
     1261 tgctttagct aatatcgtaa caattggttt agcagtatta ggtggattgt ggtttccgat
     1321 aaacacattt ccaaattggc ttcaacatgt tgctcatgtc ttaccgagct atcatttgcg
     1381 taaactaggt gtagatattg cttcaaatca tcatatcaat ttaatatcat ttgctataat
     1441 actcttgtat gctttaggga gtataatagc agtatattgt attagtcatt ttaaaagggc
     1501 ggaataaaat atgaaatttt taaaagatac ttcaattgct gaaatatcgt ctatacttta
     1561 tctgattttt cctattgccg gtatattttt taatgaagta tatggtccca aatggttgta
     1621 tattatatca gtcattgtct tttcgttgtc gtatcttata ttagttatag taaataatag
     1681 acttaataca ttaatgtttt acattttgtt gattattcat tattttatta tttgttattt
     1741 tgttttcagt gtacatccaa tgctaagttt gtttttcttt tatagtgctt ttgccgttcc
     1801 atttactttt aaaaataatg ttaaaaaaac ggcaactaat cttttcatac taacaatgat
     1861 tatatgtaca ataataacgt acttattgta taacaactat tttgttgcaa tgatggttta
     1921 ttatgtcgtt atatcgttaa taatgctaga taattttaaa aaaatgaaaa accgtgaata
     1981 tcaaaaagaa atagcagaaa aaaatagaca tattaataca ttaattgctg aacaagagcg
     2041 acatagaatt ggtcaagact tacatgatac gttagggcat gtgtttgcaa gtttatcatt
     2101 aaaatcagaa ttagcttata aactaataga tgctgatgta gaaaaaataa aagctgaa
//
LOCUS       DALPQQ010000210         2151 bp    DNA     linear   BCT 22-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus strain K18-6-464
            SAMD00233528-rid16434743.denovo.214, whole genome shotgun sequence.
ACCESSION   DALPQQ010000210 DALPQQ010000000
VERSION     DALPQQ010000210.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMD00233528
            Sequence Read Archive: DRR236061
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 2151)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2151)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001543423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001543423.1
            Genome Coverage       :: 77x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/22/2022 17:09:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,811
            CDSs (total)                      :: 2,743
            Genes (coding)                    :: 2,689
            CDSs (with protein)               :: 2,689
            Genes (RNA)                       :: 68
            rRNAs                             :: 2, 4, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 4, 2 (16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 54
            CDSs (without protein)            :: 54
            Pseudo Genes (ambiguous residues) :: 0 of 54
            Pseudo Genes (frameshifted)       :: 27 of 54
            Pseudo Genes (incomplete)         :: 27 of 54
            Pseudo Genes (internal stop)      :: 10 of 54
            Pseudo Genes (multiple problems)  :: 10 of 54
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2151
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMD00233528-rid16434743.denovo.214"
                     /strain="K18-6-464"
                     /db_xref="taxon:1280"
                     /geo_loc_name="Japan: Niigata"
     gene            151..768
                     /locus_tag="O7798_002590"
     CDS             151..768
                     /locus_tag="O7798_002590"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000882165.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF443 family protein"
                     /protein_id="HDC2864779.1"
                     /translation="MLCETEIINKNPKYRVIKYDDEYLMVDVIRTWLVYFFPFINWFI
                     PKRCAKISREEYEKLNTVKPVKNKNFWPVVGGTILLGATSRKYIHLLNIQLEKRSVIF
                     ICFVVFLCILIFFVLLNRKLKLKVFDNKKEEQKIILVPTLKNAVLILYGYLLIGGMSI
                     LALSMLLTLENQNLITFIAWGMGLMLFFLMNITLIVNKTVKVIKR"
     gene            843..1472
                     /locus_tag="O7798_002591"
     CDS             843..1472
                     /locus_tag="O7798_002591"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499155.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF443 domain-containing protein"
                     /protein_id="HDC2864780.1"
                     /translation="MLCESRVINQNPKYRIIKYNNEYFMVDLVSTWIAYFLPMINWFI
                     PKKYAKISREEFESLNIVKPAKNNTFWPVAGFAVLLTTLTRKYIYLLNIHLEKEIVIL
                     TCCMILLGVFALFIYINTKLKLHIFDKNKSNNEKIILIPTFKNICLSLFAYILFGGLS
                     TMALSMLVTSSPQNIIEFLALIGMTACFFLLNMSSVLDKKIHVILKTNK"
     gene            1529..1645
                     /locus_tag="O7798_002592"
     CDS             1529..1645
                     /locus_tag="O7798_002592"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499156.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDC2864781.1"
                     /translation="MILNRGAILEQGNKTAKVIKSELITNYIMLATLQIKNN"
     gene            1668..>2151
                     /locus_tag="O7798_002593"
     CDS             1668..>2151
                     /locus_tag="O7798_002593"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000882081.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF443 family protein"
                     /protein_id="HDC2864782.1"
                     /translation="MLCESKIINKNPKYRIIKYNDEYLMIDIISTWISLFFPFINWFI
                     PKRYVKISREEFENLNIVKPAKKNVFWPVAGISTLFAVTLRKYTHLLDTQLDRKLVIA
                     ICCITFIGILTFYVRLIKKSSLNIYNTKNKRSKIILIPTLKNFCLTLFRYAFFILWTV
                     I"
BASE COUNT          817 a          249 c          320 g          765 t
ORIGIN      
        1 aatatgtctt caataataga caaaaagatt catgttatat atttaaggtc atataaatat
       61 taattttgat acaaaagggc acaagtgttt tgagaaacag aaacgataat atagctgtgt
      121 gaatttgtta ttaataggaa gtgataatta ttgctttgtg aaaccgaaat tatcaataaa
      181 aatccgaaat acagagttat taagtatgat gatgagtatt taatggtcga tgtaataaga
      241 acttggcttg tatacttttt tccatttatt aattggttca ttccaaaaag gtgcgccaaa
      301 attagtagag aagagtatga aaaactgaac actgttaagc cagttaaaaa taaaaatttt
      361 tggcctgttg taggaggaac aatcctacta ggtgctactt ccagaaagta catacactta
      421 cttaatattc aattagaaaa aagatcggtt atatttatat gcttcgttgt atttctatgt
      481 attttaatct tttttgtgct tctgaatcga aaattaaaat tgaaagtttt cgataataaa
      541 aaagaagaac aaaaaataat tttagtacca acattaaaaa atgctgttct tatattatat
      601 ggctatttgt tgattggagg catgtcaata ttagctttaa gcatgttgct gacattagaa
      661 aaccagaatt taataacttt tatagcttgg ggtatggggt taatgttgtt tttcttgatg
      721 aatataacac tcattgtcaa taaaacagtc aaagttataa aaaggtgaat aaataactaa
      781 ttatattgta ttggccgttc ttcaaataaa aaataatttg aataaggtgg aagtgataaa
      841 cagtgctttg cgaatctaga gtcattaatc aaaaccctaa atatagaatt attaaataca
      901 ataatgaata tttcatggtt gatttagtaa gtacttggat tgcttatttt ttgcccatga
      961 ttaattggtt tattcccaaa aagtacgcga aaattagtag agaagaattt gaaagtttaa
     1021 atattgtcaa acccgctaaa aataatactt tctggcctgt tgcaggattt gcagtgttat
     1081 taacaacctt aacaagaaaa tatatctatt tgcttaacat ccatttagaa aaagaaatag
     1141 ttatattaac atgctgtatg atacttctag gtgttttcgc attgtttata tatataaata
     1201 caaaattgaa gttacatatt tttgataaaa ataaaagtaa taacgaaaag atcatattaa
     1261 tacctacatt taaaaatatt tgtttatcct tatttgctta tatattattt ggtggattgt
     1321 caacaatggc tctgagtatg ttagtaactt catcccctca aaatataata gaatttcttg
     1381 ctttaattgg catgactgca tgcttctttc tactgaatat gtcatcggtt ctagataaaa
     1441 aaattcatgt tattttaaaa acaaataagt agtaaaattg attaacttag gtagtatcgg
     1501 atacttaaat gttggttcat aaaaagcaat gattttaaat cgaggagcta tcttagaaca
     1561 gggaaataaa acagccaaag ttataaaaag tgaattaata actaattata ttatgttagc
     1621 cacgcttcaa ataaaaaata attagaataa ggtgggattg ataatcaatg ctatgcgaat
     1681 ctaaaatcat caataaaaac cccaaatata gaattattaa atataatgat gagtacttaa
     1741 tgatcgatat aataagcact tggattagtt tattttttcc ttttattaat tggttcatcc
     1801 ccaaaagata cgtcaaaatt agtagagaag agtttgaaaa tttaaatatt gtgaaacctg
     1861 ctaaaaagaa tgttttttgg ccagttgcag gtatctctac tttattcgca gttacattaa
     1921 gaaagtatac acatttactt gacactcaac ttgatagaaa attagttatt gctatatgtt
     1981 gtatcacatt tatagggatt ttaacatttt atgtacgcct aattaaaaaa tcatctttaa
     2041 atatttataa tactaaaaat aaaaggtcaa aaattatctt aataccaaca ctaaaaaatt
     2101 tttgtttaac attgtttaga tatgcttttt ttattttatg gacagtgatt t
//
LOCUS       DALPQQ010000211         2117 bp    DNA     linear   BCT 22-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus strain K18-6-464
            SAMD00233528-rid16434743.denovo.215, whole genome shotgun sequence.
ACCESSION   DALPQQ010000211 DALPQQ010000000
VERSION     DALPQQ010000211.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMD00233528
            Sequence Read Archive: DRR236061
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 2117)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2117)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001543423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001543423.1
            Genome Coverage       :: 77x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/22/2022 17:09:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,811
            CDSs (total)                      :: 2,743
            Genes (coding)                    :: 2,689
            CDSs (with protein)               :: 2,689
            Genes (RNA)                       :: 68
            rRNAs                             :: 2, 4, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 4, 2 (16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 54
            CDSs (without protein)            :: 54
            Pseudo Genes (ambiguous residues) :: 0 of 54
            Pseudo Genes (frameshifted)       :: 27 of 54
            Pseudo Genes (incomplete)         :: 27 of 54
            Pseudo Genes (internal stop)      :: 10 of 54
            Pseudo Genes (multiple problems)  :: 10 of 54
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2117
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMD00233528-rid16434743.denovo.215"
                     /strain="K18-6-464"
                     /db_xref="taxon:1280"
                     /geo_loc_name="Japan: Niigata"
     gene            complement(57..308)
                     /locus_tag="O7798_002594"
     CDS             complement(57..308)
                     /locus_tag="O7798_002594"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500199.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S20"
                     /protein_id="HDC2864783.1"
                     /translation="MANIKSAIKRVKTTEKAEARNISQKSAMRTAVKNAKTAVSNNAD
                     NKNELVSLAVKLVDKAAQSNLIHSNKADRIKSQLMTANK"
     gene            654..>2117
                     /gene="lepA"
                     /locus_tag="O7798_002595"
     CDS             654..>2117
                     /gene="lepA"
                     /locus_tag="O7798_002595"
                     /EC_number="3.6.5.n1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500198.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor 4"
                     /protein_id="HDC2864784.1"
                     /translation="MDNEQRLKRRENIRNFSIIAHIDHGKSTLADRILENTKSVETRD
                     MQDQLLDSMDLERERGITIKLNAVRLKYEAKDGNTYTFHLIDTPGHVDFTYEVSRSLA
                     ACEGAILVVDAAQGIEAQTLANVYLALDNELELLPVINKIDLPAAEPERVKQEIEDMI
                     GLDQDDVVLASAKSNIGIEEILEKIVEVVPAPDGDPEAPLKALIFDSEYDPYRGVISS
                     IRIVDGVVKAGDKIRMMATGKEFEVTEVGINTPKQLPVDELTVGDVGYIIASIKNVDD
                     SRVGDTITLASRPASEPLQGYKKMNPMVYCGLFPIDNKNYNDLREALEKLQLNDASLE
                     FEPESSQALGFGYRTGFLGMLHMEIIQERIEREFGIELIATAPSVIYQCVLRDGSEVT
                     VDNPAQMPDRDKIDKIFEPYVRATMMVPNDYVGAVMELCQRKRGQFINMDYLDDIRVN
                     IVYELPLAEVVFDFFDQLKSNTKGYASFDYEFIENKES"
BASE COUNT          737 a          282 c          401 g          697 t
ORIGIN      
        1 ctatctttat aaaaaataaa agttcaagca tgcgcttgaa cttttattta aaaagattat
       61 ttatttgcag tcattaattg tgatttaata cggtcagctt tgtttgaatg tattaaatta
      121 ctttgagcag ctttgtctac taacttaact gctaagctta ctaattcatt tttattatca
      181 gcgttatttg aaacagctgt tttagcgttt ttaactgctg tacgcattgc actcttttgt
      241 gaaatgttgc gtgcttcagc tttttcagtt gtttttacac gtttaattgc agatttgata
      301 tttgccattt ctgtcacctc ctaaaagtga gttcatctta tcaaaatttt atttgattac
      361 aacaagaaat attttaacaa aagtctaacc gttgtgcaat catttatttg atggggttag
      421 cttaaaattt tgcagattta ataaattgtg ttggaaacac aatcaatacg ttttataatt
      481 ataagtacgt aattaacata ttaacatatc gcaagtatgt atttaaataa agattgttat
      541 aatttcaaag ttcatccaag attatggcgt ttgcatttac ctattaaaaa cgttattata
      601 tcaaagatgc gaaagataat acgggtttat tttatgaaag tgagaaggat aaaatggata
      661 atgagcaacg cttaaaaaga agagagaata taaggaattt ctcgattata gcacatattg
      721 accacggaaa atctacattg gctgatagaa ttttagaaaa taccaaatca gttgaaacaa
      781 gagatatgca agatcagtta ctagattcaa tggatttaga aagagaacgt ggtattacaa
      841 tcaaattaaa cgcagtacgt ttaaagtacg aagctaaaga tggaaatact tatacattcc
      901 atttaatcga tacgcctgga cacgtcgatt ttacatatga agtgtcacgt tctttggcag
      961 cttgtgaggg cgcgatttta gtagtagatg cggctcaagg tatcgaagca caaacattag
     1021 caaatgttta tttagcatta gataatgagt tagagttatt gcctgttatt aacaaaattg
     1081 atttacctgc tgcagaacct gaacgcgtga aacaagaaat tgaagatatg ataggtttag
     1141 accaagacga tgttgtttta gcaagtgcta aatctaacat tggaattgaa gagatactag
     1201 agaaaatagt tgaagttgtg ccagctccag atggtgaccc agaagcacca ctaaaagcgt
     1261 taatatttga ttctgagtat gatccatata gaggggtaat ttcatcgata agaattgtgg
     1321 acggtgttgt taaagccgga gataaaattc gaatgatggc cactggtaaa gagttcgaag
     1381 taacagaagt tggaattaat acacctaagc agcttccagt tgatgaatta acagttggtg
     1441 atgttggtta tattattgca agtattaaaa atgttgatga ttctagggtt ggtgacacca
     1501 tcacattagc tagtagacct gcatcagaac cattgcaagg ttataagaaa atgaatccaa
     1561 tggtatattg cggactgttc ccaatagata acaaaaatta taatgattta agagaagcat
     1621 tagaaaaatt acaattgaat gatgcatcat tagaatttga gcctgaatcg tcacaagcat
     1681 taggttttgg ttatagaact ggtttcttag gtatgttaca catggaaata attcaagaaa
     1741 gaattgaaag agaatttggt attgaattaa ttgcaactgc accatctgta atttatcaat
     1801 gtgttttaag ggacggttca gaagtgacgg ttgataaccc agcacaaatg ccagatcgtg
     1861 ataaaattga taaaatattt gagccatatg ttcgtgcaac tatgatggtt ccaaatgact
     1921 atgtcggtgc agtaatggaa ttatgtcaac gtaaacgtgg acaatttata aatatggact
     1981 atttagatga tattcgtgta aatattgttt atgaattacc tttagctgaa gttgtatttg
     2041 atttcttcga tcaacttaaa tctaatacta aaggatatgc atcatttgat tatgaattca
     2101 tcgaaaataa agaaagt
//
LOCUS       DALPQQ010000212         2076 bp    DNA     linear   BCT 22-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus strain K18-6-464
            SAMD00233528-rid16434743.denovo.216, whole genome shotgun sequence.
ACCESSION   DALPQQ010000212 DALPQQ010000000
VERSION     DALPQQ010000212.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMD00233528
            Sequence Read Archive: DRR236061
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 2076)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2076)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001543423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001543423.1
            Genome Coverage       :: 77x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/22/2022 17:09:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,811
            CDSs (total)                      :: 2,743
            Genes (coding)                    :: 2,689
            CDSs (with protein)               :: 2,689
            Genes (RNA)                       :: 68
            rRNAs                             :: 2, 4, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 4, 2 (16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 54
            CDSs (without protein)            :: 54
            Pseudo Genes (ambiguous residues) :: 0 of 54
            Pseudo Genes (frameshifted)       :: 27 of 54
            Pseudo Genes (incomplete)         :: 27 of 54
            Pseudo Genes (internal stop)      :: 10 of 54
            Pseudo Genes (multiple problems)  :: 10 of 54
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2076
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMD00233528-rid16434743.denovo.216"
                     /strain="K18-6-464"
                     /db_xref="taxon:1280"
                     /geo_loc_name="Japan: Niigata"
     gene            <1..137
                     /locus_tag="O7798_002596"
     CDS             <1..137
                     /locus_tag="O7798_002596"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499489.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="competence protein CoiA"
                     /protein_id="HDC2864785.1"
                     /translation="DNLNYFKLKKFIVALESKTAIIEKLINNYLNICSDKGNDVQILF
                     "
     gene            185..1993
                     /gene="pepF"
                     /locus_tag="O7798_002597"
     CDS             185..1993
                     /gene="pepF"
                     /locus_tag="O7798_002597"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499490.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="oligoendopeptidase F"
                     /protein_id="HDC2864786.1"
                     /translation="MSQQLSREEQERKYPEYTWDLTTIFKDDEAFEAAFKEVENELGK
                     EEQFKGHIGDSAETLYNALELEDTLGTKLEKVYVYAHLKQDQDTTNDKYTGMESRAHQ
                     LIIKFSSAWSFLVPEILQIDEDKIQSFVNSYDKLQKFAFDLKLINEKRPHILDAETEK
                     LLTEAQDALSTPSNVYGMFSNADLVFEDAIDKDGNAHPLTQGTFIKYLETDDRKLRES
                     AFRNVYKAYGAHNNTLGATLAGEVKKNVFNARTHNYKTAREKALSNNHIPENVYDNLV
                     KTVHKYLPLLHRYTELRKELLGLDDLKMYDLYTPLIKDIKFEMPYEEAKEWMLKALEP
                     MGEEYLNVVKEGLNNRWVDVYENKGKRSGGYSSGAHLTNPFILLNWSNTISDLYTLVH
                     EFGHSAHSYFSRKFQPSNSSDYTIFVAEVASTCNEALLSDYMDKHLDDEKRLLLLNQE
                     LERFRATLFRQTMFAEFEHKIHAIEEAGEPLTPTRMNEEYAKLNKLYFGDSVETDEDI
                     SKEWSRIPHFYMNYYVYQYATGYSAAQSLSHQILTEGKPAVDRYINEFLKKGSSNYPI
                     EILKNAGVDMTTPEPIEQACEVFEQKLNAFEKLMKA"
BASE COUNT          811 a          277 c          365 g          623 t
ORIGIN      
        1 atgacaatct taattatttt aaactgaaaa aatttattgt tgctctagaa agtaaaacag
       61 caattataga aaaacttatt aacaattatt taaatatttg ttcagataaa ggtaatgacg
      121 tgcaaatttt gttctaaaat gagaaaatta tatcaattat attttattag gaggtttact
      181 acatatgagt caacaattat cgagagaaga acaggaacgt aaatatcctg aatatacatg
      241 ggacttaaca acaattttca aagatgatga agcttttgag gctgcattta aagaagttga
      301 aaatgagtta ggcaaagaag aacaatttaa aggacacatt ggtgatagtg ctgagacatt
      361 atacaatgcg ttagaattag aagatacatt aggtactaaa ttagaaaaag tatatgtata
      421 cgcgcaccta aaacaagacc aagatacaac gaacgacaag tatactggta tggagtcaag
      481 agcacatcaa ttaattatta aatttagctc ggcatggagt ttcttagtgc cagagatttt
      541 acaaattgat gaagataaaa ttcaatcatt tgtaaattca tatgataaat tacaaaaatt
      601 cgcatttgat ttgaagttga ttaatgaaaa acgtcctcat attttagatg ctgaaactga
      661 aaagttatta acagaagcgc aggacgcgtt atcaacgcca tcaaatgtat acggtatgtt
      721 tagcaacgct gatttagtat ttgaagatgc gatagataaa gatggaaatg cacacccgtt
      781 aacacaaggt acatttatta agtatttaga aacagatgat cgcaaactaa gagaaagtgc
      841 ttttagaaat gtatataaag catatggtgc tcataataat acgcttggcg ctacgctagc
      901 aggtgaagtg aagaaaaatg tatttaatgc tcgtacacac aattacaaaa ctgcaagaga
      961 aaaagcattg agtaataatc atattccaga aaatgtatat gacaatctag taaaaactgt
     1021 acataaatat ttaccattgc tacatagata tactgaattg cgcaaagaat tgctaggttt
     1081 agatgacttg aaaatgtatg atttatatac accattaatt aaagatatta agtttgaaat
     1141 gccttatgaa gaagctaaag agtggatgtt aaaagcatta gaaccaatgg gtgaagaata
     1201 tttaaatgta gttaaagaag gcttaaacaa tcgttgggtc gatgtctatg agaataaagg
     1261 taaacgttca ggtggctatt catcaggtgc acatttaact aatccattta ttctacttaa
     1321 ctggtctaat actatttcag acttatacac attagttcat gaatttgggc attcagcaca
     1381 tagttacttc agtagaaaat tccaaccgtc aaattctagt gactacacta tttttgtcgc
     1441 tgaagttgca tcaacttgta acgaagcact tttaagtgat tatatggata aacatcttga
     1501 tgatgaaaaa cgcttattat tattaaacca agaattagaa cgtttcagag ctacattatt
     1561 ccgacaaaca atgttcgcag aatttgagca taaaattcat gcaattgaag aagcaggtga
     1621 accattaacg ccaactagaa tgaatgaaga atatgccaaa ttaaataaat tatacttcgg
     1681 tgattctgta gaaactgatg aagatattag taaggaatgg tcacgtattc cacacttcta
     1741 tatgaattat tatgtatatc aatacgcaac tggttacagt gcagctcaaa gcttaagtca
     1801 tcaaatttta acagaaggta agccagcagt agatagatat attaatgaat tcttgaaaaa
     1861 aggtagctca aattatccaa ttgagatatt aaaaaatgct ggtgtagata tgacaacacc
     1921 tgaaccaatt gaacaagctt gtgaagtttt tgaacaaaaa ttgaacgctt ttgaaaaatt
     1981 aatgaaagct tagtactatt gtattcgctt acattatgaa cagattgtga caatttaaat
     2041 taagtactat taaaaggttg aaatggtaga gatagc
//
LOCUS       DALPQQ010000213         2046 bp    DNA     linear   BCT 22-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus strain K18-6-464
            SAMD00233528-rid16434743.denovo.217, whole genome shotgun sequence.
ACCESSION   DALPQQ010000213 DALPQQ010000000
VERSION     DALPQQ010000213.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMD00233528
            Sequence Read Archive: DRR236061
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 2046)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2046)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001543423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001543423.1
            Genome Coverage       :: 77x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/22/2022 17:09:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,811
            CDSs (total)                      :: 2,743
            Genes (coding)                    :: 2,689
            CDSs (with protein)               :: 2,689
            Genes (RNA)                       :: 68
            rRNAs                             :: 2, 4, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 4, 2 (16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 54
            CDSs (without protein)            :: 54
            Pseudo Genes (ambiguous residues) :: 0 of 54
            Pseudo Genes (frameshifted)       :: 27 of 54
            Pseudo Genes (incomplete)         :: 27 of 54
            Pseudo Genes (internal stop)      :: 10 of 54
            Pseudo Genes (multiple problems)  :: 10 of 54
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2046
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMD00233528-rid16434743.denovo.217"
                     /strain="K18-6-464"
                     /db_xref="taxon:1280"
                     /geo_loc_name="Japan: Niigata"
     gene            complement(<1..1199)
                     /locus_tag="O7798_002598"
     CDS             complement(<1..1199)
                     /locus_tag="O7798_002598"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498985.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="restriction endonuclease subunit S"
                     /protein_id="HDC2864787.1"
                     /translation="MSNTQKKNVPELRFPGFEGEWEEKQLGDLTDRVIRKNKNLESKK
                     PLTISGQLGLIDQTEYFSKSVSSKNLENYTLIKNGEFAYNKSYSNGYPLGAIKRLTRY
                     DSGVLSSLYICFSIKSEMSKDFMEAYFDSTHWYREVSGIAVEGARNHGLLNVSVNDFF
                     TILIKYPSLEEQQKIGKFFSKLDRQIELEEQKLELLQQQKKGYMQKIFSQELRFKDEN
                     GEDYPDWENSKIEKYLKERNERSDKGQMLSVTINSGIIKFSELDRKDNSSKDKSNYKV
                     VRKNDIAYNSMRMWQGASGKSNYNGIVSPAYTVLYPTQNTSSLFIGYKFKTHRMIHKF
                     KINSQGLTSDTWNLKYKQLKNINIDIPVLEEQEKIGDFFKKMDILISKQKMKIEILEK
                     EKQSFLQ"
     gene            complement(1192..>2046)
                     /locus_tag="O7798_002599"
     CDS             complement(1192..>2046)
                     /locus_tag="O7798_002599"
                     /EC_number="2.1.1.72"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000028656.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I restriction-modification system subunit
                     M"
                     /protein_id="HDC2864788.1"
                     /translation="GSLLLRVGKETQVYRYFGQERNNTTYNLARMNMLLHDVRYENFD
                     IRNDDTLENPAFLGNTFDAVIANPPYSAKWTADSKFENDERFSGYGKLAPKSKADFAF
                     IQHMVHYLDDEGTMAVVLPHGVLFRGAAEGVIRRYLIEEKNYLEAVIGLPANIFYGTS
                     IPTCILVFKKCRQQDDNVLFIDASNDFEKGKNQNHLSDAQVERIIDTYKRKETIDKYS
                     YSATLQEIADNDYNLNIPRYVDTFEEEAPIDLDQVQQDLKNIDKEIAEIEQEINAYLK
                     ELGVLKDE"
BASE COUNT          571 a          389 c          282 g          804 t
ORIGIN      
        1 ttttgtaaaa aggattgttt ctctttttct aatatttcaa ttttcatttt ctgtttactt
       61 atcaatatat ccattttttt aaagaaatca cctatctttt cttgttcctc caatacaggt
      121 atatctatat ttatattttt taattgttta tattttaagt tccatgtatc tgatgttaat
      181 ccttgtgaat taattttaaa tttatgaatc attctatgtg ttttaaactt atatccaata
      241 aataatgagc tagtattttg tgttggataa agcacagtat atgcagggct aacaatccca
      301 ttataatttg atttaccact agccccttgc cacattctca tagaattata tgcaatatca
      361 tttttcctaa ctactttata attactttta tctttacttg aattatcttt tctatccaat
      421 tcactaaatt ttataatgcc actatttata gttactgaaa gcatttgccc tttgtcagaa
      481 cgttcgtttc tctcttttaa atatttttct attttgctat tttcccaatc tggataatct
      541 tcaccattct catctttgaa tcgcagttcc tgtgagaaaa ttttctgcat atagcctttt
      601 ttctgttgtt gaagtaattc aagcttttgt tcttctaatt caatttgtcg gtcgagtttg
      661 ctgaagaact tgcctatttt ttgctgttct tctaaacttg gatatttaat tagaatagta
      721 aaaaaatcat tcacagaaac atttaataat ccgtgatttc ttgcaccctc aactgcaatt
      781 ccagaaactt ctctatacca gtgtgtcgaa tcaaaatatg cttccatgaa gtctttagac
      841 atttcacttt taatagaaaa acaaatatac aaagaggaca atacaccact atcatatcta
      901 gttaatcttt taatagcccc taatgggtat ccattagaat aacttttgtt atacgcgaat
      961 tctccattct ttattagtgt ataattttct agatttttcg acgaaactga tttactaaaa
     1021 tattctgttt gatcaattaa acctaactgt ccggatattg ttaaaggctt tttcgattct
     1081 aagtttttat ttttcctaat tactctatct gtaagatccc ctaactgctt ctcttcccat
     1141 tcgccttcaa accctgggaa cctcaattct ggcacatttt tcttttgtgt attactcatc
     1201 tttcaacacc ccaagttctt tcaggtatgc attgatttct tgctcaattt ctgcgatttc
     1261 tttatcgata tttttcaaat cttgttggac ttgatctaaa tcaatcggtg cttcttcttc
     1321 gaatgtatcg acatatctcg gtatatttag gttgtaatcg ttatcggcaa tctcttgtag
     1381 tgtcgcgctg tagctatatt tatcaattgt ttccttacgc ttatatgtgt ctataatacg
     1441 ttcgacttgg gcatcgctta aatgattttg attttttcct ttttcaaaat cattggatgc
     1501 atcgataaat agtacgttgt cgtcttgttg gcgacatttt ttaaatacta aaatacatgt
     1561 tggaatactt gtcccataga aaatattcgc tggcaaacca atcacagctt ctaagtagtt
     1621 cttttcttca attaaataac gacgaatgac accttctgca gcacctcgga ataatacacc
     1681 atgtgggagt acaacggcca tggtaccttc atcgtctagg taatgtacca tgtgttgaat
     1741 aaaggcaaag tctgctttag acttaggcgc aagtttgccg taaccactga atcgttcgtc
     1801 attttcaaac tttgaatctg cagtccattt cgcactatac ggtgggttcg caataaccgc
     1861 atcaaatgta ttgcctaaaa aggctgggtt ttccaatgtg tcatcattac ggatatcgaa
     1921 gttctcataa cgcacatcat gtaataacat attcatgcgt gctaagttgt atgtagtatt
     1981 gttacgttct tgaccgaaat aacgatacac ttgtgtttct ttaccaacac gtaacaacag
     2041 tgaacc
//
LOCUS       DALPQQ010000214         2042 bp    DNA     linear   BCT 22-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus strain K18-6-464
            SAMD00233528-rid16434743.denovo.218, whole genome shotgun sequence.
ACCESSION   DALPQQ010000214 DALPQQ010000000
VERSION     DALPQQ010000214.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMD00233528
            Sequence Read Archive: DRR236061
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 2042)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2042)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001543423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001543423.1
            Genome Coverage       :: 77x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/22/2022 17:09:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,811
            CDSs (total)                      :: 2,743
            Genes (coding)                    :: 2,689
            CDSs (with protein)               :: 2,689
            Genes (RNA)                       :: 68
            rRNAs                             :: 2, 4, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 4, 2 (16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 54
            CDSs (without protein)            :: 54
            Pseudo Genes (ambiguous residues) :: 0 of 54
            Pseudo Genes (frameshifted)       :: 27 of 54
            Pseudo Genes (incomplete)         :: 27 of 54
            Pseudo Genes (internal stop)      :: 10 of 54
            Pseudo Genes (multiple problems)  :: 10 of 54
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2042
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMD00233528-rid16434743.denovo.218"
                     /strain="K18-6-464"
                     /db_xref="taxon:1280"
                     /geo_loc_name="Japan: Niigata"
     gene            20..151
                     /locus_tag="O7798_002600"
     CDS             20..151
                     /locus_tag="O7798_002600"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499947.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDC2864789.1"
                     /translation="MLLPSSKSHIEMMCEMFKLRSFCENKDNNYSFYNSEKSVYDNN"
     gene            413..1072
                     /gene="arlR"
                     /locus_tag="O7798_002601"
     CDS             413..1072
                     /gene="arlR"
                     /locus_tag="O7798_002601"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499946.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor ArlR"
                     /protein_id="HDC2864790.1"
                     /translation="MTQILIVEDEQNLARFLELELTHENYNVDTEYDGQDGLDKALSH
                     YYDLIILDLMLPSINGLEICRKIRQQQSTPIIIITAKSDTYDKVAGLDYGADDYIVKP
                     FDIEELLARIRAILRRQPQKDIIDVNGITIDKNAFKVTVNGAEIELTKTEYDLLYLLA
                     ENKNHVMQREQILNHVWGYNSEVETNVVDVYIRYLRNKLKPYDRDKMIETVRGVGYVI
                     R"
     gene            1069..>2042
                     /gene="arlS"
                     /locus_tag="O7798_002602"
     CDS             1069..>2042
                     /gene="arlS"
                     /locus_tag="O7798_002602"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499945.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sensor histidine kinase ArlS"
                     /protein_id="HDC2864791.1"
                     /translation="MTKRKLRNNWIIVTTMITFVTIFLFCLIIIFFLKDTLHNSELDD
                     AERSSSDINNLFHSKPVKDISALDLNASLGNFQEIIIYDEHNNKLFETSNDNTVRVEP
                     GYEHRYFDRVIKKRYKGIEYLIIKEPITTQDFKGYSLLIHSLENYDNIVKSLYIIALA
                     FGVIATIITATISYVFSTQITKPLVSLSNKMIEIRRDGFQNKLQLNTNYEEIDNLANT
                     FNEMMSQIEESFNQQRQFVEDASHELRTPLQIIQGHLNLIQRWEKKDPAVLEESLNIS
                     IEEMNRIIKLVEELLELTKGDVNDISSEAQTVHINDEIRSRIHSLKQL"
BASE COUNT          793 a          265 c          342 g          642 t
ORIGIN      
        1 tgaattcata cattatgaaa tgttacttcc aagttcaaaa tcgcacattg aaatgatgtg
       61 tgaaatgttt aaactacggt cattttgtga aaataaagat aataactatt cattttacaa
      121 tagtgaaaag tcagtatatg acaacaatta atattgcggt aaggccttgt gttacagtat
      181 tctatattta agtactgcaa tcagaattaa cagaatgcca ttaactgatt attaaatatt
      241 tgagttaata aataattaat gattgtagct tgaaaaattt aaaacatggt tattgatttg
      301 tgataaaatt taaacgtaaa caaactaatt taaaaagcaa ctattgtata gaaaaataca
      361 aaatttaaaa tatattacct tattagaaaa agtcgtaata tgaggtgtac aaatgacgca
      421 aattttaata gtagaagatg aacaaaactt agcaagattt cttgaattgg aactcacaca
      481 tgaaaattac aatgtggaca cagagtatga tggacaagac ggtttagata aagcgcttag
      541 ccattactat gatttaatca tattagattt aatgttgccg tcaattaatg gcttagaaat
      601 ttgtcgcaaa attagacaac aacaatctac acctatcatt ataattacag cgaaaagtga
      661 tacgtatgac aaagttgctg ggcttgatta cggtgcagac gattatatag ttaagccgtt
      721 tgatattgaa gaacttttag caagaattcg tgcaatttta cgtcgtcagc cacaaaagga
      781 tattatcgat gtcaacggta ttacaattga taagaacgct tttaaagtga cggtaaatgg
      841 cgcagaaatt gaattaacaa aaacagagta tgatttacta tatcttctag ctgaaaataa
      901 aaaccatgtt atgcaacggg aacaaatttt aaatcatgta tggggttata atagtgaagt
      961 agaaacaaat gtcgtagatg tttatataag atatttacga aacaagttaa aaccatacga
     1021 tcgtgacaaa atgattgaaa cagttcgtgg cgttgggtat gtgatacgat gacaaaacgt
     1081 aaattgcgca ataactggat tattgttacc acgatgatta cgtttgtcac gatatttttg
     1141 ttttgtttaa ttattatttt tttcttgaaa gatacactgc ataatagtga gcttgatgat
     1201 gcagaacgaa gctcaagcga tattaataat ttatttcatt ctaagcctgt taaagatata
     1261 tctgcattag acttgaatgc atctttaggt aattttcaag agataattat ttatgatgag
     1321 cataataata aattatttga gacatcgaat gataacacag tgagagttga accaggttat
     1381 gaacaccgtt attttgaccg cgtaataaaa aaacgctata aaggcattga atatttaatt
     1441 attaaagaac caattacaac gcaagatttc aaagggtata gcttgttaat tcattcacta
     1501 gaaaattatg ataacatcgt aaaatcattg tatatcattg cgctggcatt tggagtgatt
     1561 gcaacaatta taactgccac aatcagttat gtattttcaa cacaaattac taaaccgctt
     1621 gtcagtttat caaataaaat gattgagatt cgacgagatg gttttcaaaa taaattgcaa
     1681 ttaaatacaa attatgaaga aatagataat ttagcaaata cgtttaatga gatgatgagc
     1741 caaattgaag aatcatttaa tcaacaaaga caatttgttg aagatgcgtc acatgaatta
     1801 cgaacaccat tacaaattat tcaaggtcat ttaaatttga ttcagcgatg ggaaaaaaaa
     1861 gacccagcag tattagaaga atcgttaaat atttctattg aagaaatgaa tcgtatcata
     1921 aaattagtcg aagaattact tgaattgact aaaggagatg taaatgacat ttcttctgaa
     1981 gcacagaccg tgcatattaa tgatgaaatt cgctcgcgaa tacactcatt aaaacaattg
     2041 ca
//
LOCUS       DALPQQ010000215         2030 bp    DNA     linear   BCT 22-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus strain K18-6-464
            SAMD00233528-rid16434743.denovo.219, whole genome shotgun sequence.
ACCESSION   DALPQQ010000215 DALPQQ010000000
VERSION     DALPQQ010000215.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMD00233528
            Sequence Read Archive: DRR236061
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 2030)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2030)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001543423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001543423.1
            Genome Coverage       :: 77x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/22/2022 17:09:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,811
            CDSs (total)                      :: 2,743
            Genes (coding)                    :: 2,689
            CDSs (with protein)               :: 2,689
            Genes (RNA)                       :: 68
            rRNAs                             :: 2, 4, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 4, 2 (16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 54
            CDSs (without protein)            :: 54
            Pseudo Genes (ambiguous residues) :: 0 of 54
            Pseudo Genes (frameshifted)       :: 27 of 54
            Pseudo Genes (incomplete)         :: 27 of 54
            Pseudo Genes (internal stop)      :: 10 of 54
            Pseudo Genes (multiple problems)  :: 10 of 54
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2030
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMD00233528-rid16434743.denovo.219"
                     /strain="K18-6-464"
                     /db_xref="taxon:1280"
                     /geo_loc_name="Japan: Niigata"
     gene            complement(<1..811)
                     /locus_tag="O7798_002603"
     CDS             complement(<1..811)
                     /locus_tag="O7798_002603"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000477478.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDC2864792.1"
                     /translation="MFKVNKDEKQLVKAVVHLLNIASENLEFKEEVFVSSNQILSEPF
                     ITNKISIEIKDDFKHIINQYGAHAGSVLILNRLFDALYKFLKYNYDQEMLDEQFEQVK
                     EEIISYFIDKESVTRYLEYCLLQDNLINLSDKETKNIKIAITFGGSKESLDHRFHLIP
                     IVNNIESVVARLKQLSQSNMKNAKTYSQYENIRLSKLTKYLADTSEFNPNSHFYSDIQ
                     FKRKDIQISYYATMKSYISSTSSIKMPTKEDLYKDINNLMKNVAKEQDNSFT"
     gene            complement(1009..1209)
                     /locus_tag="O7798_002604"
                     /pseudo
     CDS             complement(1009..1209)
                     /locus_tag="O7798_002604"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500395.1"
                     /note="internal stop; incomplete; partial in the middle of
                     a contig; missing N-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="arsenate reductase"
     gene            complement(1187..1524)
                     /locus_tag="O7798_002605"
                     /pseudo
     CDS             complement(1187..1524)
                     /locus_tag="O7798_002605"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002434474.1"
                     /note="frameshifted; internal stop; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
     gene            1582..1755
                     /locus_tag="O7798_002606"
                     /pseudo
     CDS             1582..1755
                     /locus_tag="O7798_002606"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_089205030.1"
                     /note="The YSIRK form of extended signal peptide directs
                     nascent proteins to the cross-wall site, while signal
                     peptides lacking YSIRK direct proteins instead to the cell
                     pole. A large fraction of YSIRK proteins are surface
                     proteins anchored by sortase-mediated processing of a
                     C-terminal LPXTG motif.; incomplete; partial in the middle
                     of a contig; missing C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="YSIRK-type signal peptide-containing protein"
BASE COUNT          725 a          282 c          295 g          728 t
ORIGIN      
        1 tagtaaagct attatcttgt tctttagcaa catttttcat taaattatta atatctttat
       61 ataggtcttc cttagtaggc atttttattg atgaagttga gctaatataa cttttcatcg
      121 tcgcataata gcttatttga atatcttttc gtttaaactg aatatcgcta tagaaatgac
      181 tatttggatt gaattcacta gtatcagcta agtatttagt taatttactt aatcgaatat
      241 tttcatattg gctataagtt tttgcatttt tcatattaga ttgggagagt tgttttaatc
      301 ttgcaacaac agattcaata ttatttacaa taggaatcaa atgaaatcga tggtctaaag
      361 attcctttga tccgccgaaa gtaatggcta tctttatatt ttttgtttct ttatcactta
      421 aattaattaa gttatcttgt agtaagcaat attctaaata acgagtaacg ctttctttat
      481 caataaaata agatataatt tcttctttta cttgttcgaa ttgttcatct agcatttctt
      541 gatcgtaatt atatttcaaa aatttatata aagcgtcgaa taatcggtta agtattaata
      601 cagaaccagc gtgtgcaccg tattgattga taatatgttt gaaatcatct tttatttcaa
      661 tgcttatttt attagtgata aaaggctcac tcagtatttg gtttgagctc acgaatactt
      721 cttctttaaa ttctaaattt tcagatgcta tattaagcaa atgaactact gctttaacta
      781 gttgcttttc atctttatta actttaaaca ttcttaaatc cttttctatt tttctctaaa
      841 tatacaataa attctaagta aatagataag aaaaattact aatcctggag ataaataaaa
      901 aagtataaaa taattaataa taaaaaagcg tcctaattat attgagacgc ttaaagttta
      961 tctagcatta aataattcta tggctccttt gatttcatct ctaacacgct agaattctaa
     1021 ccaaggtttg ccagcaggat cgtcaaatct ccaatgttac ttctttacat taggcgacaa
     1081 tacaggacag ttttgatctg catagctaca tagagttact actaaatcgg attgatttag
     1141 tatatttttg tcaattaaat tagaagtatg gttcgatata tcaactctaa cttctttcat
     1201 cgcttcgata tttacattca cttgtcttta tctttttaca catacattgt tgagtaggag
     1261 aactaatata agttaattca ttgttgattg aatctaaaga cttatgatta agtcggtaca
     1321 tgcgcttagt accgtctttt cgtgtaggat actaattcat tatctactag aattttcata
     1381 tgatgactta atgtgggttg tgaaaattga aaatacgcta ataaatcaca attacatagt
     1441 tcaccgcaag attagcttta tgttcaaaat tagtatttgt aaagtatata tatacaattt
     1501 ttttgaaagt taataatatt gcataactat attgacatac tttctaaaaa attacataat
     1561 taaactaagc atattttaat tatgtatagt tatgtttttt acaaaaagga ggatgtatat
     1621 gaaaaaaata agttagactt tttaccgaat aaactaaata agtattctat tcgtaaattt
     1681 acagttggga cagcatcatt gttaatagga gcaacgttag tatttggtat tggaaatgaa
     1741 gcgaaagcag acgaggtgtc aacttctaca gagcaggtat cttcaggtga taaaaattct
     1801 gacaacacag aaaatatgac atctgctcaa tcaactgaat tagaaaatac accaagtact
     1861 gaagaatcaa caaaagaaga acaaccaagt gctgaagaag taggtaaaga agcgcaatca
     1921 agtactgaag aatcaacaaa agaagcgcaa tcaagtactg aagagtcaac aaaagaagaa
     1981 caaccaagtg ctgaagaagt aggtaaagaa gcgcaatcaa gtactgaaga
//
LOCUS       DALPQQ010000216         2030 bp    DNA     linear   BCT 22-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus strain K18-6-464
            SAMD00233528-rid16434743.denovo.220, whole genome shotgun sequence.
ACCESSION   DALPQQ010000216 DALPQQ010000000
VERSION     DALPQQ010000216.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMD00233528
            Sequence Read Archive: DRR236061
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 2030)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2030)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001543423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001543423.1
            Genome Coverage       :: 77x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/22/2022 17:09:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,811
            CDSs (total)                      :: 2,743
            Genes (coding)                    :: 2,689
            CDSs (with protein)               :: 2,689
            Genes (RNA)                       :: 68
            rRNAs                             :: 2, 4, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 4, 2 (16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 54
            CDSs (without protein)            :: 54
            Pseudo Genes (ambiguous residues) :: 0 of 54
            Pseudo Genes (frameshifted)       :: 27 of 54
            Pseudo Genes (incomplete)         :: 27 of 54
            Pseudo Genes (internal stop)      :: 10 of 54
            Pseudo Genes (multiple problems)  :: 10 of 54
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2030
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMD00233528-rid16434743.denovo.220"
                     /strain="K18-6-464"
                     /db_xref="taxon:1280"
                     /geo_loc_name="Japan: Niigata"
     gene            complement(1..1183)
                     /locus_tag="O7798_002607"
                     /pseudo
     CDS             complement(1..1183)
                     /locus_tag="O7798_002607"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500433.1"
                     /note="frameshifted; incomplete; missing C-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="restriction endonuclease subunit S"
     gene            complement(1176..>2030)
                     /locus_tag="O7798_002608"
     CDS             complement(1176..>2030)
                     /locus_tag="O7798_002608"
                     /EC_number="2.1.1.72"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000028656.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I restriction-modification system subunit
                     M"
                     /protein_id="HDC2864793.1"
                     /translation="GSLLLRVGKETQVYRYFGQERNNTTYNLARMNMLLHDVRYENFE
                     IRNDDTLENPAFLGNTFDAVIANPPYSAKWTADSKFENDERFSGYGKLAPKSKADFAF
                     IQHMVHYLDDEGTMAVVLPHGVLFRGAAEGVIRRYLIEEKNYLEAVIGLPANIFYGTS
                     IPTCILVFKKCRQQDDNVLFIDASNDFEKGKNQNHLSDAQVERIIDTYKRKATIDKYS
                     YSATLQEIADNDYNLNIPRYVDTFEEEAPIDLDQVQQDLKNIDKEIAEIEQEINAYLK
                     ELGVLKDE"
BASE COUNT          549 a          384 c          300 g          797 t
ORIGIN      
        1 ttttgtaata gtcctttttt acgttctttt aataactcaa ttctattcat ttgattattc
       61 attttattgt ctatagattt taacaatgca cttactttat cttgttcagt gagacaaggt
      121 attttaagat ttatattgca taagttcgca tgagttaatt tagctggtgc attacctgtg
      181 acaaatgctc gtagttcttt aaaatttaaa taataattca taaaaaacaa attatgatca
      241 ttacttttaa ctacatgcgc atgattattt acccagtatt gcccattagc aataaagcta
      301 ctcgtctcaa actgccccca ttttgcacca tcttctccta ttagtaatcg ttcttcatta
      361 ttgaataaat aatcttttac gtaatcaata attccagttg caccatagta agggtataac
      421 cccttttctc ttaatgaaga agtaattggt tttcttctat tattttcaaa gataaagatg
      481 tcttttatga atttgttttc ccactctgga tattcttcac cattctcatc tttgaatcgc
      541 aattcttgtg tgaagatttt ctgcatatag ccttttttct gttgttgaag caattcaagt
      601 ttttgttctt ctaattcaat ttgtcggtcg agtttgctga agaacttgcc tattttttgc
      661 tgttcttcaa atatagttgg ggtgaagatt tttaaattag caatttcttt gaagtttaga
      721 ccttctcgac tacctccact ttgtgcaagg aaaattttcc ttttaccttt tcttgataat
      781 agatactgtc caaaaaaatt ataataatac tcttttttca atctaataat acatgttgat
      841 ttaaattagc atgcgtttca actatcgaat taatggctgt tctacctatt gatgctcctg
      901 taatatttaa aagaacatca ccatagtacg ttctactatt tttcatctca tcatctatat
      961 ctttactaat ataaactaag tcattaagat ttaatttacc atttctaata ttttgactcc
     1021 ttaaaaatgg tatgcctttg tttgtatagt tttcacttcc acctttggga gtctttccac
     1081 tacctatttt ggtagtaaga ttccctaact tcttctcttc ccattcgcct tcaaatcctg
     1141 ggaatctcaa ctctggcaca tttttcgttt gtgtattact catctttcaa caccccaagt
     1201 tctttcaggt atgcattgat ttcttgttca atttctgcga tttctttgtc gatatttttc
     1261 aaatcttgtt ggacttgatc taaatcaatt ggtgcttctt cttcgaatgt atcaacatat
     1321 cgcggtatgt ttaagttgta atcgttatcg gcgatctctt gtaatgtcgc gctgtagcta
     1381 tatttatcaa tcgttgcttt acgcttatat gtgtctataa tacgttcgac ttgggcatcg
     1441 cttaaatggt tttgattttt tcctttttca aaatcattgg atgcatcgat aaatagtacg
     1501 ttgtcgtctt gttggcgaca ttttttaaat actaaaatac atgttggaat acttgtccca
     1561 tagaaaatat tggctggtaa cccaatcacg gcttctaagt agttcttttc ttctattaaa
     1621 tagcgacgaa tcacaccttc tgcggcacca cggaataata caccatgtgg gagtacgact
     1681 gccatggtac cttcatcgtc taggtaatgt accatgtgtt gaataaaggc aaagtctgct
     1741 ttggattttg gcgcaagctt gccgtaacca ctgaatcgtt catcattttc aaattttgaa
     1801 tctgctgtcc atttcgcact gtatggtggg ttcgcaataa ccgcatcaaa tgtattgcct
     1861 aaaaaggctg gattttccaa tgtgtcatca ttacggatct cgaagttctc ataacgcaca
     1921 tcatgtaata acatattcat gcgtgctaag ttgtatgtag tattgttacg ttcttgtccg
     1981 aaataacgat acacttgcgt ttctttacca acacgtaaca acaatgaacc
//
LOCUS       DALPQQ010000217         1999 bp    DNA     linear   BCT 22-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus strain K18-6-464
            SAMD00233528-rid16434743.denovo.221, whole genome shotgun sequence.
ACCESSION   DALPQQ010000217 DALPQQ010000000
VERSION     DALPQQ010000217.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMD00233528
            Sequence Read Archive: DRR236061
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 1999)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1999)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001543423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001543423.1
            Genome Coverage       :: 77x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/22/2022 17:09:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,811
            CDSs (total)                      :: 2,743
            Genes (coding)                    :: 2,689
            CDSs (with protein)               :: 2,689
            Genes (RNA)                       :: 68
            rRNAs                             :: 2, 4, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 4, 2 (16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 54
            CDSs (without protein)            :: 54
            Pseudo Genes (ambiguous residues) :: 0 of 54
            Pseudo Genes (frameshifted)       :: 27 of 54
            Pseudo Genes (incomplete)         :: 27 of 54
            Pseudo Genes (internal stop)      :: 10 of 54
            Pseudo Genes (multiple problems)  :: 10 of 54
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1999
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMD00233528-rid16434743.denovo.221"
                     /strain="K18-6-464"
                     /db_xref="taxon:1280"
                     /geo_loc_name="Japan: Niigata"
     gene            <1..339
                     /locus_tag="O7798_002609"
     CDS             <1..339
                     /locus_tag="O7798_002609"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499364.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF5067 domain-containing protein"
                     /protein_id="HDC2864794.1"
                     /translation="YLLSDKKYKDWTEHNQDQIKKGKTAQAMFIYELRGDGNINLNVH
                     KYSEDKTVDSKSFKFSKLKTEDFSHRAETREEVEKKEKEFEEEYKKEQEREKEKEKQK
                     DDDHSGLDEV"
     gene            566..889
                     /locus_tag="O7798_002610"
     CDS             566..889
                     /locus_tag="O7798_002610"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499362.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDC2864795.1"
                     /translation="MNNEELEMRLLLMKQSIEQLQEELAPNLKTRDLVLLRYMYSYKE
                     INMLDSYLFQLATNKEQITKKQFKTKLENIREVPEIPIRQVNDILEGYKNSELYVELI
                     NSILK"
BASE COUNT          803 a          280 c          294 g          622 t
ORIGIN      
        1 tatcttttaa gtgataaaaa atataaagat tggacagaac ataaccaaga tcaaattaaa
       61 aaaggcaaaa ctgcacaagc catgtttatc tatgagttaa gaggtgatgg aaatattaat
      121 ttaaatgtcc ataaatactc agaagataaa acagttgatt ctaaatcatt caaatttagt
      181 aaacttaaaa ccgaagattt ttctcataga gcggaaacaa gagaagaagt agaaaagaaa
      241 gaaaaagaat ttgaagaaga gtacaaaaaa gaacaagaac gagagaaaga aaaagaaaag
      301 caaaaagatg acgaccacag tggtttagat gaagtataaa tttggtttgt tgattgtctt
      361 acattcagtt atttaatttt tagagaaact gacttattta tagcttagcc aacatgatac
      421 tataaagcta tgattaaaaa taaaaaatct gtgtttaatg gtgttaaaga aatcagtccc
      481 cgtgccggaa aatcataaaa aaaagatggg ataaatttgt aaatcccgcg ttggtcaagc
      541 attaatataa aaagagtgtg ataaaatgaa taatgaagaa ttagaaatga gattgttatt
      601 aatgaaacaa tcaatagaac aattacaaga agaactagcg cctaacttaa aaactagaga
      661 tttagtgtta ttaagatata tgtattcata taaagaaatt aatatgctag attcttactt
      721 gttccaattg gctacaaata aagagcaaat aacaaaaaaa caatttaaaa caaaattgga
      781 aaacattaga gaagtaccag aaatacctat tagacaagtt aatgatatat tagaaggtta
      841 taaaaatagt gagttatatg ttgagttgat aaatagcatc ctaaaataaa aataaacata
      901 ctaagattag ctatgaagga atctatgacg atagattttt tcatagctat tttttatagt
      961 tataaagagg agtagtctgt tctgactctt ggattttaaa tatgtataat aaacaagtaa
     1021 gctttactct cgccttttaa aattcgtttg tagtatgttg ggttcttaaa atcgtgaata
     1081 ggaaaatgca atgagaaagg ttaagtaaag tttttaactt ctcatttatt caatggaaaa
     1141 ttttttatcg attacttaga cattaatatt agtaaaagaa gtagtgtagt tgcaaattat
     1201 aaaaactaaa aattccaaaa agagtttatc atccaaaaca ataaaaatgg ctacaatggt
     1261 atgttgtgaa atgcatttct taactacgac ttcttttatt tccgtctcgt caactattgc
     1321 tgattgtgtt aataggcata ttgattctaa tgaaaatatc aaaactcggc tcatctcttt
     1381 ataactacac ccacttagtg acgtaacaaa aatgaaaagt tctttttcag tagccattta
     1441 tccaattaag tgtagacgat tcacattttt atattgacat atataacatg gagaattttt
     1501 tgcgtataaa gaagtttctt catgaacaat gttgaatgta aaactcagaa tccaactttt
     1561 ttgacactta tttgacacac atcactgtcc ccttatatct caaaaactaa ttcataatca
     1621 cttattactc tttcctccat caaataaaca cctatacaaa cactgctata tcaatactca
     1681 caacaaattc tgcaatgcat tatcccctga aaaacacaaa ataaaaaagc ccacaaccac
     1741 aaaggctgta ggctacaaat atggagacgg cgggagttca ttaaagcgtt tatctattca
     1801 tgtataactc gctataagca ttgtcatatc aacgtttaaa ttggctactc tattgtgtgt
     1861 aaaatgttaa aattgataaa actatataaa tttgtgcacc caacatcacc tcataattaa
     1921 cgtattcaaa tacgtattca ctgcctgcaa cgtgtgggat gatacatatt tttctataac
     1981 tcttccttta taacctttt
//
LOCUS       DALPQQ010000218         1981 bp    DNA     linear   BCT 22-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus strain K18-6-464
            SAMD00233528-rid16434743.denovo.222, whole genome shotgun sequence.
ACCESSION   DALPQQ010000218 DALPQQ010000000
VERSION     DALPQQ010000218.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMD00233528
            Sequence Read Archive: DRR236061
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 1981)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1981)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001543423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001543423.1
            Genome Coverage       :: 77x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/22/2022 17:09:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,811
            CDSs (total)                      :: 2,743
            Genes (coding)                    :: 2,689
            CDSs (with protein)               :: 2,689
            Genes (RNA)                       :: 68
            rRNAs                             :: 2, 4, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 4, 2 (16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 54
            CDSs (without protein)            :: 54
            Pseudo Genes (ambiguous residues) :: 0 of 54
            Pseudo Genes (frameshifted)       :: 27 of 54
            Pseudo Genes (incomplete)         :: 27 of 54
            Pseudo Genes (internal stop)      :: 10 of 54
            Pseudo Genes (multiple problems)  :: 10 of 54
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1981
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMD00233528-rid16434743.denovo.222"
                     /strain="K18-6-464"
                     /db_xref="taxon:1280"
                     /geo_loc_name="Japan: Niigata"
     gene            complement(<1..595)
                     /locus_tag="O7798_002611"
     CDS             complement(<1..595)
                     /locus_tag="O7798_002611"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499231.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Bax inhibitor-1/YccA family protein"
                     /protein_id="HDC2864796.1"
                     /translation="MSQNTNHSYYHQNQHAQSISKVWLYFMYYWIIFGIGCYLGQFLP
                     LSWRQPLSFGLLIIILATLVFERARRFGLIISHIYAVVIGLLSYATFTTYLQNLGPDI
                     FYKNIALAIFAFIAFGIIGYFFVGDASSIGKYLFVTLITLIIASLIGIFLQNPIFYTI
                     ITVVSLLLFLLYTLYDFNRLKRGDYSPREMGFNLFINL"
     gene            956..1753
                     /locus_tag="O7798_002612"
     CDS             956..1753
                     /locus_tag="O7798_002612"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499230.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysM peptidoglycan-binding domain-containing
                     protein"
                     /protein_id="HDC2864797.1"
                     /translation="MKKLAFAITATSGAAAFLTHHDAQASTQHTVQSGESLWSIAQKY
                     NTSVESIKQNNQLDNNLVFPGQVISVGGSDAQNTSNTSPQAGSASSHTVQAGESLNII
                     ASRYGVSVDQLMAANNLRGYLIMPNQTLQIPNGGSGGTTPTATTGSNGNASSFNHQNL
                     YTAGQCTWYVFDRRAQAGSPISTYWSDAKYWAGNAANDGYQVNNTPSVGSIMQSTPGP
                     YGHVAYVERVNGDGSILISEMNYTYGPYNMNYRTIPASEVSSYAFIH"
BASE COUNT          747 a          331 c          281 g          622 t
ORIGIN      
        1 acaaattaat aaatagatta aatcccattt ctcttggtga atagtcacct ctttttaaac
       61 gattaaaatc atacaaagta taaagtagaa ataacaacag actaacgacg gtaataatag
      121 tgtaaaaaat aggattttga agaaaaatac caattagact cgcaataatt aatgttatta
      181 atgtaacgaa taaatatttg cctatactcg atgcatctcc aacgaagaaa taaccaataa
      241 taccaaatgc tataaatgca aaaattgcta atgcgatatt tttatagaaa atatctggtc
      301 ctaaattttg taaatacgtg gtaaacgttg cgtatgacaa taagccaatc actacagcgt
      361 aaatatgtga aataattaaa ccgaaccgtc tcgctctttc aaaaacaagt gttgctaaaa
      421 taataatcag taatccaaat gacaagggtt gtcgccaact taatggtaaa aactgaccta
      481 gatagcatcc tatgccaaat ataatccaat aatacataaa ataaagccac actttactta
      541 ttgattgagc atgctggttt tgatgataat atgaatgatt tgtattttgc gacaaaataa
      601 ttcctccttc taccgtcgtt ttatgcgtca aattttacag taaattttgc ttcatcaaaa
      661 gaaataacct ttaacaagta tagtaatttt acattttaca atgttacaaa atataatttt
      721 ttataattag ttaaaatcac taaaacgctt ttatacacta tcaaatcagc atttataaaa
      781 atatgaaccg atatcctaaa atgttaataa tattacaaga taataacaaa ccacacaaag
      841 ctacttattt ttgataatat ggaaatcgta atataaaacg aaaacttaat ttactatata
      901 aattgtctta ataattttta aaagtagtaa aacataattt taaggaggag tccctttgaa
      961 aaaattagca tttgcaataa cagcaacatc tggtgcagct gcatttttaa cgcatcatga
     1021 tgcacaagct tctacacaac atacagtaca atctggtgaa tcattatgga gtattgctca
     1081 aaaatacaac acttcagtag agagtattaa acaaaataac caattagata acaacttggt
     1141 attccctggt caagttatct cagtaggtgg aagtgatgca caaaatacgt caaacacttc
     1201 tccacaagct ggttcagcat catctcatac tgtacaagct ggtgaatcat taaatatcat
     1261 tgctagcaga tatggtgttt cagttgatca attaatggca gccaataact tacgtggtta
     1321 tttaattatg cctaaccaaa cattacaaat tcctaatggt ggatcaggtg gtacaacacc
     1381 aacagctaca acaggtagca atggcaatgc atcatctttt aatcaccaaa atttatacac
     1441 tgctggtcaa tgtacatggt acgtatttga ccgtcgtgct caagctggta gtccaattag
     1501 cacatattgg tcagacgcta agtattgggc tggtaacgca gctaatgatg gttaccaagt
     1561 aaacaacaca ccatcagttg gttcaattat gcaaagcaca cctggtccat atggtcatgt
     1621 tgcttatgtt gaacgtgtca atggtgatgg tagtatcttg atttctgaaa tgaattacac
     1681 atatggtcca tacaatatga actaccgtac aattccagct tcagaagttt ctagctatgc
     1741 attcatccat taattaaata aattgtactg atatatacta gcaattcaca tcatgtgaga
     1801 ttgctagttt tttatttttg aaaaaaattt tcattttggt acaaaaaatt atctcaccct
     1861 tccctatcat acatatttat attttgtatg aatggtagtt aggtaaaaat taacaaccta
     1921 cctatttgat taaattaaat gcataatata ttaaaaatca aaataatgca actaagttga
     1981 c
//
LOCUS       DALPQQ010000219         1957 bp    DNA     linear   BCT 22-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus strain K18-6-464
            SAMD00233528-rid16434743.denovo.223, whole genome shotgun sequence.
ACCESSION   DALPQQ010000219 DALPQQ010000000
VERSION     DALPQQ010000219.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMD00233528
            Sequence Read Archive: DRR236061
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 1957)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1957)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001543423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001543423.1
            Genome Coverage       :: 77x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/22/2022 17:09:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,811
            CDSs (total)                      :: 2,743
            Genes (coding)                    :: 2,689
            CDSs (with protein)               :: 2,689
            Genes (RNA)                       :: 68
            rRNAs                             :: 2, 4, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 4, 2 (16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 54
            CDSs (without protein)            :: 54
            Pseudo Genes (ambiguous residues) :: 0 of 54
            Pseudo Genes (frameshifted)       :: 27 of 54
            Pseudo Genes (incomplete)         :: 27 of 54
            Pseudo Genes (internal stop)      :: 10 of 54
            Pseudo Genes (multiple problems)  :: 10 of 54
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1957
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMD00233528-rid16434743.denovo.223"
                     /strain="K18-6-464"
                     /db_xref="taxon:1280"
                     /geo_loc_name="Japan: Niigata"
     gene            139..852
                     /locus_tag="O7798_002613"
     CDS             139..852
                     /locus_tag="O7798_002613"
                     /EC_number="2.2.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500402.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transaldolase"
                     /protein_id="HDC2864798.1"
                     /translation="MAKLNVEVFADGADIEEMKAAYKNKQVDGFTTNPSLMAKAGVTD
                     YKAFAEEAVKEIPDASISFEVFADDLETMEKEAAILKQYGENVFVKIPIVNTKGESTI
                     PLIKKLSADNVRLNVTAVYTIEQVKEITEAVTEGVPTYVSVFAGRIADTGVDPLPLMK
                     EAVKVTHSKDGVKLLWASCRELFNVIQADEIGADIITCPADVVKKVNTNLGRDINELS
                     VDTVKGFAKDIQSSGLSIL"
     gene            complement(1292..1927)
                     /gene="sdpA"
                     /locus_tag="O7798_002614"
     CDS             complement(1292..1927)
                     /gene="sdpA"
                     /locus_tag="O7798_002614"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500401.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CPBP family intramembrane metalloprotease SdpA"
                     /protein_id="HDC2864799.1"
                     /translation="MQKFKDFFYDDLSVTRGNYFLTLMAAFFITIILFIGIVVSEVHL
                     LYSMLIVLVGLILLRLFKINLFSFKKLTLSQVIYIIGGALLIYGLDNLYLYFHDVPAN
                     EQQLEQAIRNTPFYISIFTVTIIPAIVEEIVFRGMIIRVIFRKHLFLGLIVSSLVFAS
                     LHESDTWIGYLPYLYSGLIFGLIYIKTKRLEVVIFMHFLNNLLALLFIIWR"
BASE COUNT          767 a          253 c          322 g          615 t
ORIGIN      
        1 attagctata tattataaaa gcgtgatata aatgttttat ataacaaaga aataaaaatc
       61 attttttaca aatggttgta agaaaaagac atgcagatgt tgttaaaatt ttaataagaa
      121 tcaaggaggc tatattatat ggctaaacta aatgtagaag tatttgcgga cggtgcagat
      181 attgaagaaa tgaaagcagc ttataaaaac aaacaagtgg atggttttac aacaaatcct
      241 agtttaatgg ctaaagcggg cgtaacagat tacaaagctt ttgctgaaga agctgtgaaa
      301 gaaattccag atgcttcaat ttcatttgaa gtatttgcag acgatttaga aactatggaa
      361 aaagaagcag caattttaaa acaatatggc gaaaatgtat ttgttaaaat tcctattgta
      421 aatacaaaag gtgaatcaac gattccttta attaaaaaac tttcagctga caatgtgaga
      481 ttaaacgtta cggctgttta cacaattgaa caagttaaag aaataactga agcagtaact
      541 gaaggtgtgc caacatatgt ttcagtattt gcaggacgta ttgcagatac aggcgtagat
      601 ccattaccat taatgaaaga ggctgtaaaa gttacgcata gtaaagacgg cgttaaatta
      661 ttatgggcaa gttgccgcga attattcaat gtgattcaag ctgatgaaat tggtgcagat
      721 attattacat gcccagcaga tgttgtgaaa aaagtgaata caaacttagg tcgcgatatt
      781 aacgaattat cagtagatac agttaaaggc tttgcgaaag atattcaatc ttcaggtctt
      841 tctattctat aatatataaa tatatttaaa ccctcatagg cattgtgctt atgggggttt
      901 ttccatcata gttattaatg aagaagaagt caaaattcag ctaagtaaaa gctcgagtta
      961 taaaaaagtc taaattgatt caacaggagt agaaaaggaa attagtcttg catattttag
     1021 aaaatgaata aaaacagtta ctatatgcaa ctcaagaatt aaatattatt taagccacat
     1081 acctattaga gtacaaaata tacaagttgt acttatatct aggtatgtga cttttgattt
     1141 taagcgtaaa gtaaaagttt ttatgtttgt attagttcta aattattttg cacttgatga
     1201 cacgtatttt tgagtttaag tggtgactca agttcaataa aataaatatc agatagataa
     1261 tttgaaaata atatgaaagg ttatctcaaa attatctcca tattataaag agcagagcta
     1321 acaagttatt taagaagtgc atgaatatta caacttctaa tcgttttgtt tttatataaa
     1381 ttaggccaaa aatcaaacca gaatataagt aaggtaaata accaatccaa gtgtcagatt
     1441 cgtgtaatga tgcaaaaact aaactagaca caattaaccc taaaaacaag tgttttctga
     1501 agataaccct tattatcata ccgcgaaaaa caatttcttc cacaatagcg gggatgatgg
     1561 taacagtgaa aatagaaata tagaatggtg tatttcgtat tgcttgctct aattgttgtt
     1621 catttgccgg tacgtcatga aaatataaat aaagattatc taacccataa attaatagtg
     1681 caccgcctat aatataaata acttgagaca atgttaattt tttaaaagag aataaattga
     1741 ttttgaatag cctcaataga attaaaccta ctaatacaat tagcatgcta taaagtaaat
     1801 gtacttcact gacaactatg ccgataaata aaatgatagt aataaaaaat gctgccatta
     1861 aagttaaaaa ataatttcct cgtgtaaccg ataaatcatc gtaaaaaaag tctttgaatt
     1921 tttgcatgct aaatcctttc ttttcatttt ttaaaat
//
LOCUS       DALPQQ010000220         1954 bp    DNA     linear   BCT 22-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus strain K18-6-464
            SAMD00233528-rid16434743.denovo.224, whole genome shotgun sequence.
ACCESSION   DALPQQ010000220 DALPQQ010000000
VERSION     DALPQQ010000220.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMD00233528
            Sequence Read Archive: DRR236061
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 1954)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1954)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001543423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001543423.1
            Genome Coverage       :: 77x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/22/2022 17:09:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,811
            CDSs (total)                      :: 2,743
            Genes (coding)                    :: 2,689
            CDSs (with protein)               :: 2,689
            Genes (RNA)                       :: 68
            rRNAs                             :: 2, 4, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 4, 2 (16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 54
            CDSs (without protein)            :: 54
            Pseudo Genes (ambiguous residues) :: 0 of 54
            Pseudo Genes (frameshifted)       :: 27 of 54
            Pseudo Genes (incomplete)         :: 27 of 54
            Pseudo Genes (internal stop)      :: 10 of 54
            Pseudo Genes (multiple problems)  :: 10 of 54
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1954
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMD00233528-rid16434743.denovo.224"
                     /strain="K18-6-464"
                     /db_xref="taxon:1280"
                     /geo_loc_name="Japan: Niigata"
     gene            56..1363
                     /locus_tag="O7798_002615"
     CDS             56..1363
                     /locus_tag="O7798_002615"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500730.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TrkH family potassium uptake protein"
                     /protein_id="HDC2864800.1"
                     /translation="MNKVHKPLYFYLMLFFSTTIIGALLLYLPFTGKKPISFLDALFI
                     ASSAFTVTGLSPVDIGSQFNILGEIVILLLIQIGGLGIVTVTLLTLVFLNRKISMKNR
                     FLIMVTWNIDEPGGVIKLIKHLAIYSLVTELIGMICLCLSFIPKFGIGKGLFLSLFTS
                     VSAFNNAGFALFKNNLIDYSSDPIVIITISILIIFGGIGHFVVIDFINCKKLSKLSLH
                     SKLVLTTTSILIIIGAITFFLLEQFNTMQHMGLVEKIGNSFFQSVTTRTAGFNSIDIA
                     SINKSTALMLMLLMFIGGAPLSAAGGIKITTFAVAFIFVLNYIRKENNVSVFNKEISD
                     KHIKLSIVTINISFLFISIITFILSIINPNISLIKLLFEVVSAFGTVGLSMNLTTEYH
                     GITKIIIIFVMLCGKVGLLTLLRTFIPPKSPKNYRYTKGQIYL"
BASE COUNT          682 a          302 c          254 g          716 t
ORIGIN      
        1 catttatgat attatctaat tattaattta taatataaag gagtatgaaa ttaaaatgaa
       61 caaagtccac aaacctttat atttttattt aatgcttttc ttctctacaa ctatcatagg
      121 tgcactttta ttgtatttac cttttactgg taaaaagcca atatcttttt tagatgccct
      181 atttatagct tcaagtgcat ttacagttac tggcttgtcc ccagttgata taggatcaca
      241 gtttaatata cttggtgaga tagtaatact attattaatt caaataggtg gtctgggtat
      301 cgtgaccgta accctattga cactagtatt tttaaataga aagatatcaa tgaaaaatag
      361 attcttgatt atggttacat ggaatattga cgaacctggt ggtgttatta agctaattaa
      421 acacttggct atttatagtt tagtcactga attaattggt atgatttgtt tgtgtttatc
      481 ttttatacca aaatttggta taggcaaagg tttattttta agcttattca catcagtatc
      541 agcttttaat aatgctggat ttgccctttt taagaataac ttaatagatt attctagtga
      601 tccaattgtc attattacaa tctcaatact cataatattt ggaggtattg gacattttgt
      661 cgtgatagac tttattaatt gtaaaaaatt gagtaaatta tctttacatt ctaaattagt
      721 cttaactaca actagtatcc taataattat aggagctatt acattctttt tattagaaca
      781 gtttaatact atgcaacata tgggactagt tgaaaaaatc ggaaattctt ttttccaatc
      841 agtaacaaca cgaacagcgg gttttaacag tatagatata gcaagcatta acaaatctac
      901 cgcattaatg ttaatgctac ttatgtttat tggtggtgcc cctctcagtg cagctggagg
      961 aattaaaata actacttttg cagttgcgtt tatttttgta ctaaattata tacgtaaaga
     1021 aaataatgtt tcagtattca ataaagaaat atctgacaaa catataaaac tatctattgt
     1081 taccattaat atctcatttc tatttatcag catcattact tttatattat cgataattaa
     1141 tccgaacata tcattaatca agttattatt cgaagtggtt tctgcattcg gaacagtagg
     1201 gttaagtatg aaccttacca cagaatatca tggtattact aaaataatta ttatattcgt
     1261 tatgctttgc ggtaaagtag gactattaac tttattaaga acatttatac caccaaaaag
     1321 tcctaaaaat taccgctaca ctaaaggaca aatttatcta taaaataact atccatcttt
     1381 aataagaaat gaactagtgt tttaatctat tacattaaaa aaactaccta aacaggtagt
     1441 tttttattta ttttaggccg attaaatgtc ttatgtcttt aattaagtaa aatgcacaag
     1501 tacaccttta aaaagattta ctcaaaacta aactatacct agttaaccgc ttgtgattaa
     1561 gaaattttaa atgtggtttc ttttaattat gtcaaccacc cataaggatt ttaatcaagc
     1621 actcattcat tcctgcactc gcaatatgca ttacttatag aagtggatgc actctcatat
     1681 tatggcaata ccataactcc cgcaccataa tgatttaaat accattatga atctcaatta
     1741 caaattagca cataaaaaag acgcctccca taagtctagt caccaaatgg aaaacgtctc
     1801 gtaattaaaa tatatttgcg tgcattctaa tttgtactta gaatacatca tactcgttca
     1861 taatgtaatt ttctaattag tcaaaactat atacagtttt acatcattcc cggcattatg
     1921 cactaataaa aacttacttt aatacacgct ttaa
//
LOCUS       DALPQQ010000221         1879 bp    DNA     linear   BCT 22-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus strain K18-6-464
            SAMD00233528-rid16434743.denovo.225, whole genome shotgun sequence.
ACCESSION   DALPQQ010000221 DALPQQ010000000
VERSION     DALPQQ010000221.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMD00233528
            Sequence Read Archive: DRR236061
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 1879)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1879)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001543423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001543423.1
            Genome Coverage       :: 77x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/22/2022 17:09:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,811
            CDSs (total)                      :: 2,743
            Genes (coding)                    :: 2,689
            CDSs (with protein)               :: 2,689
            Genes (RNA)                       :: 68
            rRNAs                             :: 2, 4, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 4, 2 (16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 54
            CDSs (without protein)            :: 54
            Pseudo Genes (ambiguous residues) :: 0 of 54
            Pseudo Genes (frameshifted)       :: 27 of 54
            Pseudo Genes (incomplete)         :: 27 of 54
            Pseudo Genes (internal stop)      :: 10 of 54
            Pseudo Genes (multiple problems)  :: 10 of 54
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1879
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMD00233528-rid16434743.denovo.225"
                     /strain="K18-6-464"
                     /db_xref="taxon:1280"
                     /geo_loc_name="Japan: Niigata"
     gene            159..1034
                     /locus_tag="O7798_002616"
     CDS             159..1034
                     /locus_tag="O7798_002616"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002454936.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDC2864801.1"
                     /translation="MLTHAYTMYRKMKLIQAEKWFLLKDFGRSGKGLFMATFEKLMTV
                     NKVNFDSLISGGFESANEWMNFYGADIAHANETGEITKQMMRILRKIATGETISGRGI
                     GRNAFTFKNNAVLILDTNESVDTGEITANTTRTVKISLKDRPINETDEERYQIFKPYW
                     DFIQPNGNTSVNASVSFLITSLEYLKENGREFKFKDVTLKYYFNEDELTETQITMIRL
                     LSKQGFILAGDETLQRLIEQDYSSLRYKNAKEDMRKIGISINNQKKIDGVNTKVHKVG
                     NIELFNMALELISEH"
     gene            1210..>1879
                     /locus_tag="O7798_002617"
     CDS             1210..>1879
                     /locus_tag="O7798_002617"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000148374.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional DNA primase/polymerase"
                     /protein_id="HDC2864802.1"
                     /translation="MTGYHVAKHLLSKNIEVIPLNNHKKPTVSFADKDITDEFIEYNS
                     NIYHKTNVLGVLTRGVWCIDIDVDHENGKNGFNSLKQIPYYEELVTNAQNTLVQTTAS
                     GGKHIIFKKRSNIEYGQKIGYLPSVDIKAHPNNYFVLAGSQTAKGIYTHNGVNVTEYQ
                     GEFEKRIFSKAGNYTQQVLEPYSIRRALPNYSFSHVRGGKGGEGKRAYQRIIDGQSEY
                     RNNDL"
BASE COUNT          735 a          253 c          338 g          553 t
ORIGIN      
        1 tatatgattg ccaaaattta acgcttacag aacaaaaatt aaaaagtgat gagctctact
       61 caattaaata tgacgtagat attaaagata tcaatttaga aatacccaga aacttctttg
      121 atttagtaac tgacaatgaa aagagtaaaa acaatttaat gctaacacac gcttatacaa
      181 tgtatcgaaa aatgaaattg atacaagcag aaaagtggtt tttacttaaa gattttggtc
      241 gttctggaaa aggtttgttt atggctacat ttgaaaaatt gatgacagtg aacaaagtta
      301 attttgatag ccttatttct ggtggttttg aatcggcaaa tgagtggatg aatttttacg
      361 gtgcagatat agctcatgct aatgagacag gtgaaatcac taaacaaatg atgcgcatat
      421 taagaaaaat agcaacaggt gaaacaattt ctggacgtgg cattggaaga aacgcattta
      481 catttaaaaa taacgccgta ttaatactag atacaaatga aagtgtcgat actggtgaaa
      541 ttacagctaa tacaacacga acagttaaaa tatcactaaa agatagacct ataaatgaaa
      601 ctgatgaaga acgttatcag atatttaagc cgtattggga ttttatacaa cctaatggca
      661 acacttcagt taatgcgtct gtgtcattct taataacgag tttggaatat ttaaaagaaa
      721 atgggcgaga atttaaattt aaagatgtaa cgctcaagta ttattttaat gaagatgaat
      781 tgactgaaac tcaaattact atgatcagat tgttatcaaa acaaggcttt atattagcag
      841 gtgatgaaac attacaacgc ttaatagaac aagattactc aagtttacgt tacaagaacg
      901 ctaaagaaga tatgaggaaa attggcatta gtatcaataa tcaaaagaaa atagacgggg
      961 taaatacaaa agttcataaa gttggaaaca ttgaattatt taacatggct ttagaactaa
     1021 tttctgaaca ctaaggttac tgtaactctt ggtaacttat atagtaactc taaaaatggc
     1081 gttataacaa ttggtaacct atataactct tattactgta acattaatcg ataactttta
     1141 atgttgttga tgatataggt aaaaataaga gttattagag ttactggcta tctacaaagg
     1201 aggtatacaa tgacaggtta tcatgtagcg aaacacttat taagtaagaa tattgaagtt
     1261 ataccactaa ataatcacaa aaagccaact gtttcatttg ctgataaaga tattaccgat
     1321 gaattcattg aatataattc taatatttat cataaaacaa atgtattagg cgtattaaca
     1381 cgaggtgtat ggtgtatcga tattgatgta gatcatgaaa atggtaagaa tggtttcaat
     1441 agtttgaaac aaataccata ttacgaagaa cttgttacca atgcacaaaa tacattagta
     1501 cagacaacgg caagtggtgg gaaacatatc atctttaaga aacgtagcaa tatcgaatat
     1561 ggtcagaaga taggttattt accgtctgtt gatatcaaag cacatcccaa caattatttt
     1621 gtgcttgcag gtagtcaaac agctaaaggt atatacactc ataatggtgt caatgtaact
     1681 gagtatcaag gagagttcga gaaacgaata ttttctaaag ctggtaatta cacacaacaa
     1741 gtattagaac cgtattccat tcgacgagca ttacctaatt acagttttag ccacgtaaga
     1801 ggtggcaaag gtggagaggg aaaacgcgca tatcaacgta tcatagacgg tcaaagtgaa
     1861 tataggaaca atgatttat
//
LOCUS       DALPQQ010000222         1815 bp    DNA     linear   BCT 22-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus strain K18-6-464
            SAMD00233528-rid16434743.denovo.226, whole genome shotgun sequence.
ACCESSION   DALPQQ010000222 DALPQQ010000000
VERSION     DALPQQ010000222.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMD00233528
            Sequence Read Archive: DRR236061
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 1815)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1815)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001543423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001543423.1
            Genome Coverage       :: 77x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/22/2022 17:09:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,811
            CDSs (total)                      :: 2,743
            Genes (coding)                    :: 2,689
            CDSs (with protein)               :: 2,689
            Genes (RNA)                       :: 68
            rRNAs                             :: 2, 4, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 4, 2 (16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 54
            CDSs (without protein)            :: 54
            Pseudo Genes (ambiguous residues) :: 0 of 54
            Pseudo Genes (frameshifted)       :: 27 of 54
            Pseudo Genes (incomplete)         :: 27 of 54
            Pseudo Genes (internal stop)      :: 10 of 54
            Pseudo Genes (multiple problems)  :: 10 of 54
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1815
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMD00233528-rid16434743.denovo.226"
                     /strain="K18-6-464"
                     /db_xref="taxon:1280"
                     /geo_loc_name="Japan: Niigata"
     gene            45..602
                     /locus_tag="O7798_002618"
     CDS             45..602
                     /locus_tag="O7798_002618"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001669025.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1700 domain-containing protein"
                     /protein_id="HDC2864803.1"
                     /translation="MNKITYLNELETALDALPRHLRDQKMYEYERYFYEQELNGVDEG
                     EILKKLKDPQDVAAETKARSVIDYAESKPTFENISRAVAASLSLGILSIFVILIPVSI
                     VGLFVLALFLISLLLLFCPIILLASAISRGIVDSISNVFFAISYSGLGLVFIIVIFKI
                     LEYIYRLILKYLLWYIKTVKGSVRK"
     gene            599..1441
                     /locus_tag="O7798_002619"
     CDS             599..1441
                     /locus_tag="O7798_002619"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500637.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4097 family beta strand repeat protein"
                     /protein_id="HDC2864804.1"
                     /translation="MKKFFFIGLLVFVVFFTAATIIWFSYDKNKYGTKQYDKTFKDDA
                     FDNVSINLDSTELRIKRGNQFRVKYDGDNDILINIVDKTLKISDKRSKTRGYAIDMNP
                     FHENKKTLTIEMPDKMIKRLNLSSGAGSVRISDVDLENTSIQSINGEVVIKNSNLDAL
                     DSKTNNSSTYISKSNIKNSNIKVVIGTLQIDKSQIKQSIFLNDHGDIEFKNMPSKVDA
                     KASTKQGDIRFKYDSKPEDTILKLNPGTGDSVVKNKTFTNGKVGKSDNVLEFYTIDGN
                     IKVE"
     gene            complement(1498..>1815)
                     /locus_tag="O7798_002620"
     CDS             complement(1498..>1815)
                     /locus_tag="O7798_002620"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500636.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA--6-aminopenicillanic acid
                     acyltransferase"
                     /protein_id="HDC2864805.1"
                     /translation="NRNYTKESKERLARTISQTNDNLDMTTAFKLFNNPQYEIYSKLF
                     KSWSGTIHTSMYQPETLTAYFTLGENAPPEIIDFKSWLDGQDLNITHFTGNIDTDLTF
                     ANK"
BASE COUNT          656 a          219 c          320 g          620 t
ORIGIN      
        1 ttataaaaaa cgaatgaata attttattgg gatgagtgac ctatatgaac aagattactt
       61 atttaaatga attagaaaca gcacttgatg cgctacctag gcatttaaga gatcaaaaaa
      121 tgtatgaata tgaacgttat ttttatgagc aagaacttaa tggcgttgat gaaggggaaa
      181 ttttaaagaa gttaaaagac ccacaagatg ttgcagctga aacaaaagct agaagtgtta
      241 ttgattatgc tgaatctaaa ccaacatttg aaaatatttc aagagctgtt gctgcttcat
      301 taagtttagg cattctatct atttttgtca tccttatacc agtatctata gttggattat
      361 ttgtattagc attattttta atatcacttt tgctgctgtt ttgtccaatt attttattag
      421 catcagcaat atccagagga attgtggact caattagtaa tgtatttttt gccatatcat
      481 attcaggatt aggattagta tttatcattg tcatatttaa gattttagaa tacatttatc
      541 gtttaatctt aaaatattta ctttggtata ttaaaactgt caaaggaagc gttagaaaat
      601 gaagaaattc ttttttattg ggcttttagt gtttgttgtc ttttttacag cagcaaccat
      661 tatttggttc agctatgata aaaacaaata tggtactaaa caatatgata aaacattcaa
      721 agacgatgct tttgacaatg tatctataaa tttggatagt acagaacttc gtataaaacg
      781 ggggaatcaa tttagagtta aatatgatgg tgacaatgat atattaatta atatagtaga
      841 taagacgttg aagattagtg ataaaaggtc taagacaaga ggatatgcaa ttgatatgaa
      901 tccttttcat gagaataaga aaacgttaac gattgaaatg cctgataaaa tgattaaacg
      961 tttaaatcta tcatctggag caggaagtgt tagaatcagt gatgttgatt tagagaacac
     1021 aagtattcaa agcattaacg gtgaagtagt tattaaaaac tcaaatcttg acgcactaga
     1081 ttcaaagaca aataatagtt ctacttatat tagtaaaagt aacattaaaa atagcaatat
     1141 taaagttgtt attggtacgc tacaaatcga caagagtcaa attaaacaat ccatattttt
     1201 aaacgatcat ggtgacattg aatttaaaaa catgccatca aaagtagatg caaaagcttc
     1261 tactaaacaa ggagatattc gttttaagta tgatagtaaa cctgaagaca ctatactaaa
     1321 gctaaatccg ggaacgggtg atagcgtagt taaaaataaa acatttacta atggtaaagt
     1381 tgggaaaagc gacaatgttt tagaatttta tacgattgat ggtaatatca aagttgaata
     1441 aataaaggat gtaagcaccg atattaggaa gcataatttc tctaatatcg gtgttattta
     1501 tttgttggca aaagttaagt cggtatctat attgccagta aagtgagtga tattaaggtc
     1561 ttgaccatct aaccatgatt tgaaatctat tatttctggt ggcgcatttt ctcccaatgt
     1621 aaaatatgca gttaatgttt caggttgata cattgatgta tggatggtgc cagaccagct
     1681 tttgaatagt ttactgtaaa tttcatactg aggattattg aataacttaa atgctgtagt
     1741 catatctaaa ttatcattag tttgtgaaat ggtacgcgcc agtctttctt tagattcttt
     1801 tgtataatta cgatt
//
LOCUS       DALPQQ010000223         1750 bp    DNA     linear   BCT 22-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus strain K18-6-464
            SAMD00233528-rid16434743.denovo.227, whole genome shotgun sequence.
ACCESSION   DALPQQ010000223 DALPQQ010000000
VERSION     DALPQQ010000223.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMD00233528
            Sequence Read Archive: DRR236061
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 1750)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1750)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001543423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001543423.1
            Genome Coverage       :: 77x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/22/2022 17:09:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,811
            CDSs (total)                      :: 2,743
            Genes (coding)                    :: 2,689
            CDSs (with protein)               :: 2,689
            Genes (RNA)                       :: 68
            rRNAs                             :: 2, 4, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 4, 2 (16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 54
            CDSs (without protein)            :: 54
            Pseudo Genes (ambiguous residues) :: 0 of 54
            Pseudo Genes (frameshifted)       :: 27 of 54
            Pseudo Genes (incomplete)         :: 27 of 54
            Pseudo Genes (internal stop)      :: 10 of 54
            Pseudo Genes (multiple problems)  :: 10 of 54
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1750
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMD00233528-rid16434743.denovo.227"
                     /strain="K18-6-464"
                     /db_xref="taxon:1280"
                     /geo_loc_name="Japan: Niigata"
     gene            404..508
                     /locus_tag="O7798_002621"
     CDS             404..508
                     /locus_tag="O7798_002621"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499824.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDC2864806.1"
                     /translation="MFKVNYSILSYYPEYNIAVSWQRLREGKTIKNKI"
     gene            637..888
                     /locus_tag="O7798_002622"
     CDS             637..888
                     /locus_tag="O7798_002622"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499826.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDC2864807.1"
                     /translation="MLTLIKLKEDEQVIIYEYIPEDDISNGKGSVTFNKKDAEVIDFS
                     LSEIENEEYFMLYRNKSFSVVRDFIEKQEFPENYKIAWY"
     gene            964..1626
                     /locus_tag="O7798_002623"
                     /pseudo
     CDS             964..1626
                     /locus_tag="O7798_002623"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002463904.1"
                     /note="internal stop; incomplete; partial in the middle of
                     a contig; missing N-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="minor capsid protein"
BASE COUNT          708 a          191 c          294 g          557 t
ORIGIN      
        1 ccaatttgtg aaaaaggagt atgtcgtttc atttagaatt tattgcacga aattagcatc
       61 gaataaggga aaataagtgt taagttttaa atgataaaaa agattggaat ggatcgtctt
      121 gaaatgctcc cttcaaagtt ttcatttttt caatgtcgac ttcgaagggg gcattttcat
      181 taaattgtta tagcttttta tatttgtata atgaacatat aagtttaaga aggtgcgagt
      241 gaaggaaata aaaaagctca aatgtaccaa attgttaatc ttaataaatc tctactttat
      301 aaagattgaa tggacattcg agcgttaatc agtcaggagg gactttccct cctacaattt
      361 aataataata cttgcttcac cactatacaa ggagtgagtt gttatgttca aagtgaatta
      421 ttcgatttta agttattatc cagaatataa tatcgcagta agttggcaac gtttaagaga
      481 aggaaaaaca ataaaaaaca agatttaata ctgctgcgtc atgaggcgct tgaacattat
      541 ttgatgaata agtataattt caactatgat tatgcacata aaattgtatc aaaaaaatac
      601 gattattcaa tttttataaa aaagaaggtg gattaaatgc ttacattaat aaaattgaaa
      661 gaagatgaac aggttataat atatgaatat atacctgaag atgatataag taacggtaaa
      721 ggttcagtaa cttttaataa aaaagatgca gaggttatag atttctcatt atctgaaata
      781 gaaaatgaag aatattttat gttatatcgt aataagtctt tttctgtagt aagagacttt
      841 atcgagaagc aagaatttcc cgaaaattat aaaatagcat ggtattaaag catcctttct
      901 acacagataa agagaaagcg atgctatttt tatatgcttt tttcattatt cgttgaaaaa
      961 gaagagtcac aaaagttaac atatttaaaa gaacttggtg aagatggcga atataaatat
     1021 gttgccaaaa tagatagtaa aacatctaaa ttatgtcatt cactcaacgg aaaaatattt
     1081 aaagttaaag atatgatacc aggtgtgaat gcgccaccta tgcatccttg gtgtagaagt
     1141 accacagtgc cacatgtcgg caattggcga gacaagttct ttaaagagcg tgaaggtaaa
     1201 tatcaagtag aaggttgttt tattgaatca ggtgcactta ataataaaag tgatgaatac
     1261 ggtatcaaaa ggaacagaca tgctcaaatt tattataatt cagttagaaa tcgagataaa
     1321 cagatagaga tttctaaaat tgctaaaaat actaatataa ataaaaattt aattcaaaga
     1381 gtttatgaac atatatttga aaataagtat ttattagaaa gtggatttaa acaatttgat
     1441 cctgactttt atatggctca aagttggcaa cgtttaagag aagggaaaaa tattaaaaaa
     1501 atggatataa taatgtagaa acatgaagct cttgaacact atctaatgaa taagtataat
     1561 ttacactata tagaggcaca taaacttaca gaaataaaat ataattatag tattttaatt
     1621 aattagaggt ggaaatgatt gctaatatta aaaataaaag aaattaatga taaaagtgtt
     1681 acatataaat attttcctaa taatgatgaa aatattaagc ctggtattat tcaaatggat
     1741 atagatagtc
//
LOCUS       DALPQQ010000224         1746 bp    DNA     linear   BCT 22-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus strain K18-6-464
            SAMD00233528-rid16434743.denovo.228, whole genome shotgun sequence.
ACCESSION   DALPQQ010000224 DALPQQ010000000
VERSION     DALPQQ010000224.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMD00233528
            Sequence Read Archive: DRR236061
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 1746)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1746)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001543423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001543423.1
            Genome Coverage       :: 77x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/22/2022 17:09:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,811
            CDSs (total)                      :: 2,743
            Genes (coding)                    :: 2,689
            CDSs (with protein)               :: 2,689
            Genes (RNA)                       :: 68
            rRNAs                             :: 2, 4, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 4, 2 (16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 54
            CDSs (without protein)            :: 54
            Pseudo Genes (ambiguous residues) :: 0 of 54
            Pseudo Genes (frameshifted)       :: 27 of 54
            Pseudo Genes (incomplete)         :: 27 of 54
            Pseudo Genes (internal stop)      :: 10 of 54
            Pseudo Genes (multiple problems)  :: 10 of 54
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1746
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMD00233528-rid16434743.denovo.228"
                     /strain="K18-6-464"
                     /db_xref="taxon:1280"
                     /geo_loc_name="Japan: Niigata"
     gene            40..951
                     /locus_tag="O7798_002624"
     CDS             40..951
                     /locus_tag="O7798_002624"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500729.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron-hydroxamate ABC transporter
                     substrate-binding protein"
                     /protein_id="HDC2864808.1"
                     /translation="MKRLIGILLCNLFILTACSASVDKTSNSTKTTDYKIENGETLKV
                     PEKPKRVAVLTGFYVGDFIKLGIKPIAVSDITKDSSILKPYLKGVDYIGENDVERVAK
                     AKPDLIVVDAMDKNIKKYQKIAPTIPYTYNKYNHKEILKEIGKLTNNEDKAKKWIEEW
                     DDKTRKDKKEIQSKIGQATASVFEPDEKQIYIYNSTWGRGLDIVHDAFGMPMTKQYKD
                     KLQEDKKGYASISKENISKYAGDYIFLSKPSYGKFDFEKTHTWQNIEAVKKGHVISYK
                     AEDYWFTDPITLEHLRSKLKKEILNKK"
     gene            1013..>1746
                     /locus_tag="O7798_002625"
     CDS             1013..>1746
                     /locus_tag="O7798_002625"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500728.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HDC2864809.1"
                     /translation="MKQLVGIPESMLIPLIARAKEYENEKPIIKDALSKKIFDGLDDM
                     YKNVTCDDMSQIGISIRTVIIDCVTKRLIKDNKDLIVVNIGCGLDTRFQRFNKEKISW
                     IDLDVPESIEIRKTFFKESNSYKMISKSMLDYSWIDDVKNYKFFNSKSDILFIIEGVL
                     MYFDESVMTQLLDTIIKKMGDHNLTFAIEFCSKTIANNTKRHQSVSKLSSQPVFKYGY
                     NDLKKLNEILPNTIRVIHEYNYFDYY"
BASE COUNT          740 a          179 c          292 g          535 t
ORIGIN      
        1 tgaaaatgaa tatcaattga aaaacaaaag gatgatatta tgaaaagatt aattggaatt
       61 ttattatgta atttatttat tttgactgcg tgttcagcat ctgtcgataa aacaagtaac
      121 tcgacaaaga ctacagacta taaaattgaa aatggtgaaa cactgaaagt accagagaaa
      181 cctaaaagag ttgctgtatt aactggattt tatgttggtg attttataaa gttaggaatc
      241 aaaccaattg ctgtttcaga tataactaaa gattcttcaa ttttaaaacc ttatttaaaa
      301 ggggttgatt atattggaga aaatgatgtt gaaagagttg ctaaagcaaa accagattta
      361 attgttgtag atgctatgga taaaaatata aaaaaatacc aaaaaatagc gccaacaatc
      421 ccatatacat acaataaata caatcataaa gaaatattaa aagaaatagg caagttgact
      481 aataatgaag ataaagctaa aaaatggatt gaagagtggg acgataaaac tagaaaagat
      541 aaaaaagaaa ttcaaagtaa aattggtcaa gcaacagcat ctgtgtttga accagatgaa
      601 aagcaaatat acatatataa ctctacatgg ggtcgtggtt tggatattgt tcatgatgca
      661 ttcggtatgc caatgacaaa gcaatataaa gataaattac aagaagataa aaaaggctat
      721 gcttccattt caaaagaaaa tattagtaaa tatgctggtg attatatatt tttaagtaaa
      781 ccttcgtacg gaaaatttga ttttgaaaaa acacatacat ggcagaatat tgaagctgta
      841 aaaaaaggac atgtaatttc atataaagca gaagattatt ggttcacaga tcctattaca
      901 ttagaacatt tgagaagtaa attaaaaaaa gaaattttaa ataaaaaata atagaaataa
      961 gttgtaaaaa ttttcttatg cattggtact aatgttttta aggagtgatt aaatgaagca
     1021 actggttgga attcccgaat caatgttaat tcctttgata gctcgagcaa aagagtacga
     1081 aaacgaaaaa ccaataataa aagacgcact atcaaaaaaa atatttgatg gtttagatga
     1141 tatgtacaaa aatgttacat gtgatgacat gtctcaaatt ggaattagta tacgtactgt
     1201 gataatagat tgtgttacta agaggcttat caaggataat aaagatttaa tcgtggtcaa
     1261 tataggttgt ggcttagata caaggtttca aagatttaat aaagaaaaaa tatcatggat
     1321 agatttagat gtaccagaat caatagaaat acgaaaaaca ttttttaaag aaagtaatag
     1381 ttataagatg atatctaaat ctatgctaga ttacagttgg attgatgatg tcaaaaatta
     1441 taaatttttt aatagtaagt cagatatatt gtttattatt gaaggtgtat tgatgtattt
     1501 tgatgagagt gtaatgactc aattattgga cactattatc aaaaagatgg gagatcataa
     1561 tttgacattt gcgattgaat tttgctcaaa aacaattgcg aataatacaa agagacatca
     1621 atcggtatca aagttatcct cacaacctgt ttttaaatat ggttataatg atttaaaaaa
     1681 attgaatgaa attttaccaa atacaataag agtaatacat gaatataatt attttgacta
     1741 ttataa
//
LOCUS       DALPQQ010000225         1711 bp    DNA     linear   BCT 22-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus strain K18-6-464
            SAMD00233528-rid16434743.denovo.229, whole genome shotgun sequence.
ACCESSION   DALPQQ010000225 DALPQQ010000000
VERSION     DALPQQ010000225.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMD00233528
            Sequence Read Archive: DRR236061
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 1711)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1711)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001543423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001543423.1
            Genome Coverage       :: 77x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/22/2022 17:09:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,811
            CDSs (total)                      :: 2,743
            Genes (coding)                    :: 2,689
            CDSs (with protein)               :: 2,689
            Genes (RNA)                       :: 68
            rRNAs                             :: 2, 4, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 4, 2 (16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 54
            CDSs (without protein)            :: 54
            Pseudo Genes (ambiguous residues) :: 0 of 54
            Pseudo Genes (frameshifted)       :: 27 of 54
            Pseudo Genes (incomplete)         :: 27 of 54
            Pseudo Genes (internal stop)      :: 10 of 54
            Pseudo Genes (multiple problems)  :: 10 of 54
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1711
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMD00233528-rid16434743.denovo.229"
                     /strain="K18-6-464"
                     /db_xref="taxon:1280"
                     /geo_loc_name="Japan: Niigata"
     gene            complement(24..170)
                     /locus_tag="O7798_002626"
     CDS             complement(24..170)
                     /locus_tag="O7798_002626"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000784887.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pathogenicity island protein"
                     /protein_id="HDC2864810.1"
                     /translation="MKMYLTYICLVSLLTILLLAISNMYVAFSVYGMMATYGFNLTGG
                     LENE"
     gene            complement(182..454)
                     /locus_tag="O7798_002627"
     CDS             complement(182..454)
                     /locus_tag="O7798_002627"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002459646.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HDC2864811.1"
                     /translation="MKVQKLHVEPTKENTITEPKQVVVNPLFAKPSALSEIFGISYSS
                     TRRILKEWEKDSKGVDDLYYSLSSTMIVISIPRFEEYMKARHKKWM"
     gene            complement(487..699)
                     /locus_tag="O7798_002628"
     CDS             complement(487..699)
                     /locus_tag="O7798_002628"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000608987.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDC2864812.1"
                     /translation="MINKVSNYRKFMGLTQQEMADYLSISVQAYRKKEKNFTPFKDAE
                     KLLIRDKVKKYGFLDITIDDIFFTSK"
     gene            844..1539
                     /locus_tag="O7798_002629"
     CDS             844..1539
                     /locus_tag="O7798_002629"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000700230.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HDC2864813.1"
                     /translation="MKINKKRVANNIQKIRKSQGLTMEQFGNLFDAHKSLVSKWEKAM
                     SAPSRERLKEIAEYGGMTLPEILGISLEERVKEYYLNIMYGEYDLFYGFIENDEDFLN
                     NVINYISSLNLSIENVTHELVRETILSLISQKQSNLSDLETYRINEFSRIISDQRKLL
                     NELAIKLNIKEYDPNPEMLIQALSDLDSLKINIYSITERLETYLTKDIEDIINERIEK
                     VKNEYDVDYDSYI"
BASE COUNT          622 a          252 c          232 g          605 t
ORIGIN      
        1 gttctattac ttctttttgt ttattattca ttttctaatc ctcctgttaa attaaatcca
       61 taagttgcca tcatgccgta cacactaaaa gcgacataca tgttagatat tgctagtaat
      121 aatattgtta acaatgaaac taagcagata taagttaagt acattttcat tgccttgcct
      181 cctacatcca ttttttatga cgtgccttca tgtactcctc gaatcgtgga atactgataa
      241 caatcattgt tgatgataac gagtaatata aatcatcaac acctttagaa tctttttccc
      301 actcttttaa tattcgtcta gttgatgaat agctaatacc aaatatttcg cttaatgccg
      361 acggtttagc aaataacgga tttactacaa cttgctttgg ttctgtaatt gtattttctt
      421 ttgttggttc tacatgtaat ttttgaactt tcattattta acgctccttt ccaagaaact
      481 aatttgctac ttagatgtaa aaaaaatatc atctattgta atatctaaga atccatattt
      541 ttttacttta tcccttatca ataatttttc cgcgtcttta aaaggagtaa aattcttttc
      601 tttttttcga tacgcttgaa cagaaatcga taaataatct gccatttctt gttgtgtcaa
      661 acccataaac ttcctatagt tactcacttt attaatcatc atatcacctc tttgctactt
      721 atttgctact agtttaccac gctacatttc tattttcaat ataaattaga aacttttttg
      781 ctacttatca tatcattgtg atatatttat aactataaag tgcatcatta aagggtgaat
      841 atattgaaaa tcaataaaaa aagagtagct aacaatatac aaaaaatcag aaaatcacaa
      901 ggtttaacta tggaacagtt cggcaactta tttgatgctc ataaatcttt agtttcaaaa
      961 tgggaaaaag ctatgtcagc accctcacga gaaagattga aggaaatagc tgaatatgga
     1021 ggaatgaccc tacccgaaat acttggaatt agtttagaag aaagagtaaa agaatattac
     1081 cttaatataa tgtatggtga atatgattta ttctatggat ttatagaaaa tgacgaagat
     1141 tttttaaata atgtaattaa ttatatttct agtttaaact tatcaatcga aaatgttaca
     1201 catgaattag ttagagaaac tatattgtct ctaatttcgc aaaaacaatc aaatttaagc
     1261 gatttggaaa catatagaat aaacgagttc tcgagaatta tatcggatca aagaaaactg
     1321 cttaatgagt tagcaataaa acttaatatt aaagaatacg atccaaaccc tgaaatgtta
     1381 atacaagctc tttcagattt agattcatta aaaattaata tttattccat aacagaaaga
     1441 ttagagacct atttaactaa agatattgaa gatataatta atgagagaat agagaaagtg
     1501 aaaaacgaat atgatgtaga ttacgatagt tatatctagt tattaatatt gaaatatgac
     1561 cctacgtgtc tttgtacacg tacgtcttat ttcaaggttg tgagatacat agtaaaaaaa
     1621 tgattcaacc aatatactaa aggagtgatt aaaggagtga ttaattgaat gtattaatcg
     1681 aatatttaaa aagcttgaac ttgccaattt g
//
LOCUS       DALPQQ010000226         1707 bp    DNA     linear   BCT 22-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus strain K18-6-464
            SAMD00233528-rid16434743.denovo.230, whole genome shotgun sequence.
ACCESSION   DALPQQ010000226 DALPQQ010000000
VERSION     DALPQQ010000226.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMD00233528
            Sequence Read Archive: DRR236061
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 1707)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1707)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001543423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001543423.1
            Genome Coverage       :: 77x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/22/2022 17:09:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,811
            CDSs (total)                      :: 2,743
            Genes (coding)                    :: 2,689
            CDSs (with protein)               :: 2,689
            Genes (RNA)                       :: 68
            rRNAs                             :: 2, 4, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 4, 2 (16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 54
            CDSs (without protein)            :: 54
            Pseudo Genes (ambiguous residues) :: 0 of 54
            Pseudo Genes (frameshifted)       :: 27 of 54
            Pseudo Genes (incomplete)         :: 27 of 54
            Pseudo Genes (internal stop)      :: 10 of 54
            Pseudo Genes (multiple problems)  :: 10 of 54
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1707
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMD00233528-rid16434743.denovo.230"
                     /strain="K18-6-464"
                     /db_xref="taxon:1280"
                     /geo_loc_name="Japan: Niigata"
     gene            61..933
                     /gene="pmtC"
                     /locus_tag="O7798_002630"
     CDS             61..933
                     /gene="pmtC"
                     /locus_tag="O7798_002630"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500642.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phenol-soluble modulin export ABC transporter
                     ATP-binding protein PmtC"
                     /protein_id="HDC2864814.1"
                     /translation="MKLEHITKKYGSNVVLNDIDFDFGDSRIVGLIGKNGVGKTTVMK
                     VMNGNIIKFDGKVDIDNADNIGFLIEHPKLYDNKSGLYNLKLFAQVLGKGFDKAYTDK
                     IIDAFGMRPYIKKKVKKYSMGMKQKLAIAVSLMNKPKFLILDEPTNGMDPDGSIDVLT
                     TIKSLVNELDMRILISSHKLEDIELICDRAVFLRDGHFVQDVNMEEGVASDTTIVTVD
                     HKDFDRTEKYLAEHFQLQNVDKADGHLMINAQKNYQVILKALSELDIYPKYIETRKSS
                     LRDTYFNINQRGDK"
     gene            933..1673
                     /gene="pmtD"
                     /locus_tag="O7798_002631"
     CDS             933..1673
                     /gene="pmtD"
                     /locus_tag="O7798_002631"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500641.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phenol-soluble modulin export ABC transporter
                     permease subunit PmtD"
                     /protein_id="HDC2864815.1"
                     /translation="MRILNLVKYDFYSIFKSPLTYLAILVVSSLIATQSILMANSMDN
                     PKHIIVYGSVFAAAKWLLLIIGLMFVVKTITRDFSQGTIQLYMSKVKTRVGYIISKTI
                     SIILISILFALIHYVILIVVQASSNGKNLAFSKYVDNLWFFLIFLLFFGLFLFLITLA
                     SQKTAMIFSLGVFLVLIVPFIKPFITFIPRYGEKVLDAFDYIPFAYLTDKMISSNFDF
                     SNWQWVISLGSIVIFFILNILYVAKKDI"
BASE COUNT          618 a          193 c          282 g          614 t
ORIGIN      
        1 tgttaattat tttaaacagc tcaataaaat aaatactaga aaatttaaag gaggcagtcg
       61 atgaaattag aacatattac aaaaaaatac ggctcaaatg tcgttttaaa tgatattgat
      121 tttgactttg gcgatagtag aattgtcgga ttaataggaa aaaacggtgt tggtaaaaca
      181 accgttatga aagtaatgaa tggtaatatt attaaatttg atggaaaagt agatattgat
      241 aatgcagata atatcggttt tttaattgag catcctaaat tatatgataa taaatcagga
      301 ttgtataact tgaaattatt tgcacaagta ttaggtaagg gttttgataa agcatacaca
      361 gacaaaatta tagatgcatt tggtatgaga ccttatatta aaaagaaagt taagaaatat
      421 tcaatgggga tgaagcaaaa gttagcaatt gcagtatctt taatgaataa acctaaattt
      481 ttaatcttgg atgagcctac aaatggtatg gatccagatg gctcaattga tgtgctgact
      541 acaattaagt ctttagtaaa tgaacttgat atgagaattc taatatcaag tcataagtta
      601 gaagatattg aattaatttg tgatagagct gtatttttaa gagacggaca ttttgttcaa
      661 gatgtaaaca tggaggaagg tgttgcatct gacacaacga tagttactgt tgatcataaa
      721 gactttgata gaactgaaaa atatcttgca gagcatttcc aattacaaaa tgtcgacaaa
      781 gcagacggac atttaatgat caatgcacaa aaaaattatc aagttatact aaaagcatta
      841 tctgaattag atatttatcc gaaatatatt gaaacacgta aaagttcatt gcgtgatacg
      901 tacttcaata taaatcaaag aggtgataaa taatgagaat tttaaattta gttaagtatg
      961 atttttatag tatatttaaa agtcctttaa catatttagc gatactagtc gtatctagtt
     1021 tgattgcaac tcaaagtata cttatggcaa attcgatgga taacccgaaa catattattg
     1081 tctatggatc tgtatttgct gcagcaaaat ggttattgtt aataattgga ttaatgtttg
     1141 ttgttaagac aattacgcgt gatttttcac aaggtacaat tcaactatat atgagtaaag
     1201 ttaaaacacg cgttggatac attatttcga aaacaatttc aattatttta atttcaatat
     1261 tatttgcatt aattcattat gtgattttga ttgttgtgca ggcatctagt aatggaaaaa
     1321 atttggcgtt ttctaaatat gtagataatt tatggttctt cctaatcttt ttactattct
     1381 ttggcttgtt tttattctta atcacacttg catcacaaaa aacagcaatg atattttcat
     1441 taggtgtatt tttagtactc attgtaccgt ttattaaacc ttttattaca tttatcccaa
     1501 gatacggtga aaaagtttta gatgcttttg attatatccc ttttgcttac ttaactgata
     1561 aaatgattag ctctaacttt gattttagca attggcaatg ggtaatttca ttaggttcta
     1621 tagtgatatt cttcattttg aatatcttat atgtcgctaa aaaagacatt taataaaaat
     1681 aattttgagg ttgggaattt taaattt
//
LOCUS       DALPQQ010000227         1627 bp    DNA     linear   BCT 22-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus strain K18-6-464
            SAMD00233528-rid16434743.denovo.231, whole genome shotgun sequence.
ACCESSION   DALPQQ010000227 DALPQQ010000000
VERSION     DALPQQ010000227.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMD00233528
            Sequence Read Archive: DRR236061
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 1627)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1627)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001543423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001543423.1
            Genome Coverage       :: 77x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/22/2022 17:09:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,811
            CDSs (total)                      :: 2,743
            Genes (coding)                    :: 2,689
            CDSs (with protein)               :: 2,689
            Genes (RNA)                       :: 68
            rRNAs                             :: 2, 4, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 4, 2 (16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 54
            CDSs (without protein)            :: 54
            Pseudo Genes (ambiguous residues) :: 0 of 54
            Pseudo Genes (frameshifted)       :: 27 of 54
            Pseudo Genes (incomplete)         :: 27 of 54
            Pseudo Genes (internal stop)      :: 10 of 54
            Pseudo Genes (multiple problems)  :: 10 of 54
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1627
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMD00233528-rid16434743.denovo.231"
                     /strain="K18-6-464"
                     /db_xref="taxon:1280"
                     /geo_loc_name="Japan: Niigata"
     gene            complement(<1..469)
                     /locus_tag="O7798_002632"
     CDS             complement(<1..469)
                     /locus_tag="O7798_002632"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000882177.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF443 family protein"
                     /protein_id="HDC2864816.1"
                     /translation="MLCETENINKNPKYRIIKYKDEYLMIDLVSTWLALFFPMINWLI
                     PKKYVKISEKDFETLNIVKTAKINSFWPVAGSTVLFGVMLRRYSHLFIVKYEYSIVIL
                     ICCIIILGIFLFFLYLNQKLKLQIYNENKNKSNKIIIFPTLKSLCLSIVLYIYL"
     gene            complement(593..1222)
                     /locus_tag="O7798_002633"
     CDS             complement(593..1222)
                     /locus_tag="O7798_002633"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499161.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF443 domain-containing protein"
                     /protein_id="HDC2864817.1"
                     /translation="MLLCDVRVIYKNPKYKVIQHNGEYLLVDLVSTWFVYFFPFINWF
                     IPKKYAIISEEEFENLNVVKPNKNNVFWSVIGSSVLFGVTLRKYIHVFDVQLDKLVVM
                     ILCALALICVIVFYFNLNRKLKLKVFDTNIEKNKRVILIPTFKLGCFLVFGYIFAGSF
                     SIFSLIALMTIEPQNIIIFIYWIMMTMLFFLLNMTSIGNEKVRVIMKNN"
BASE COUNT          593 a          265 c          173 g          596 t
ORIGIN      
        1 ctaaataaat atataaaact attgataaac aaagactctt taaagtggga aatatgatta
       61 tcttattgct tttatttttg ttttcattat agatttgtaa ctttaacttt tgatttaaat
      121 ataaaaaaaa cagaaaaata cctagtatta tgatgcaaca aattaaaatt actatactat
      181 attcatattt aacgataaat aaatgggaat accttcttaa cataacacca aataagaccg
      241 tacttcctgc cactggccaa aaagaattga ttttagctgt cttcacaatg tttaaagttt
      301 caaaatcttt ttcgctgatt ttgacgtact tttttggaat cagccaatta atcattggga
      361 aaaagagtgc taaccatgta cttactaaat caatcatcaa atattcatct ttgtatttga
      421 taattctata tttgggattc ttattaatat tttcagtttc acaaagcaat gtctccactt
      481 cttttcaatt ggttttatat tgatacactt tcatatacat tagaagtcat ttaaattcta
      541 ctagcgtctt aaaaggattg tgtcgacaac atttagaata ttttaaatgt aatcaattat
      601 ttttcattat aacgcgaact ttttcattac ctatcgaagt catatttaac aaaaagaaaa
      661 gcattgtcat cataatccaa taaataaata ttattatatt ttgaggttcg attgtcataa
      721 gggcaattaa tgaaaatatt gaaaaacttc cagcgaaaat atatccgaaa actaaaaaac
      781 agccaagttt aaacgttggt attaatataa ctctcttatt tttttcaata tttgtatcaa
      841 acacttttaa cttaagcttt ctatttaagt taaaataaaa aactataaca caaattaaag
      901 cgagagcaca caatatcatt acaactagct tatctaattg aacatcaaaa acatgtatgt
      961 atttccttaa agtaactcca aacaaaaccg aacttcctat aactgaccag aaaacattat
     1021 ttttatttgg tttaacaaca tttaaatttt caaattcttc ttcgctaatt atcgcgtact
     1081 tttttggaat gaaccaatta atgaaaggaa aaaagtacac gaaccaagtg cttactaaat
     1141 cgactaataa gtattcaccg ttatgttgaa tgactttgta tttcggattt ttataaatga
     1201 ctctgacatc gcaaagcaac atttaccact cccgtttcat tagttttaaa tgatccccaa
     1261 tactttttgt accttcacca actatcgttc caacactatc tacagctttt tctgtggtat
     1321 ttttaaacag cgtctattta atgtcttatc caattagttt tatctcttaa tccaaattta
     1381 ttagtatgaa aagtccaatt tttaagaatt gtctaaacag attccgcaac aaaaccagct
     1441 aaaaccgtcc atactattgg attaaaaacg ccaatgttat aagagctatc atacaaaata
     1501 acacgctcta tatttcattt ttaaattaaa acagtttttt cctttatcaa tcacaatggg
     1561 cattttcact tggtatattc aaacattact atctattttc ctgatttaag atatgattat
     1621 atttttt
//
LOCUS       DALPQQ010000228         1612 bp    DNA     linear   BCT 22-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus strain K18-6-464
            SAMD00233528-rid16434743.denovo.232, whole genome shotgun sequence.
ACCESSION   DALPQQ010000228 DALPQQ010000000
VERSION     DALPQQ010000228.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMD00233528
            Sequence Read Archive: DRR236061
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 1612)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1612)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001543423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001543423.1
            Genome Coverage       :: 77x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/22/2022 17:09:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,811
            CDSs (total)                      :: 2,743
            Genes (coding)                    :: 2,689
            CDSs (with protein)               :: 2,689
            Genes (RNA)                       :: 68
            rRNAs                             :: 2, 4, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 4, 2 (16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 54
            CDSs (without protein)            :: 54
            Pseudo Genes (ambiguous residues) :: 0 of 54
            Pseudo Genes (frameshifted)       :: 27 of 54
            Pseudo Genes (incomplete)         :: 27 of 54
            Pseudo Genes (internal stop)      :: 10 of 54
            Pseudo Genes (multiple problems)  :: 10 of 54
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1612
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMD00233528-rid16434743.denovo.232"
                     /strain="K18-6-464"
                     /db_xref="taxon:1280"
                     /geo_loc_name="Japan: Niigata"
     gene            35..988
                     /locus_tag="O7798_002634"
     CDS             35..988
                     /locus_tag="O7798_002634"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500380.1"
                     /note="This family includes YhcC from E. coli K-12, an
                     uncharacterized radical SAM protein; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR01212 family radical SAM protein"
                     /protein_id="HDC2864818.1"
                     /translation="MGNHFQYAFENKRYHTWNYHLKNKFGQKIFKVALDGGFDCPNRD
                     GTVAHGGCTFCSAAGSGDFAGNRADSIAVQFKEIKEKMHEKWHEGKYIAYFQAFTNTH
                     APVEVLKEKFEPVLKEPGVVGLSIGTRPDCLPDDVVEYLADLNQRTYLWVELGLQTIH
                     QSTSDLINRAHDMKTYYDGVAKLRKHNINVCTHIINGLPGEDYDMMMATAKEVAQMDV
                     QGIKIHLLHLLKGTPMVKQYDKGLLTFMTQEEYTNLVVDQLEVIPPEMIVHRITGDGP
                     IDIMVGPMWSVNKWEVLNGIDAELARRNSYQGLRYKSKVKQ"
     gene            985..1548
                     /locus_tag="O7798_002635"
     CDS             985..1548
                     /locus_tag="O7798_002635"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500381.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HDC2864819.1"
                     /translation="MKLERILPFSKTLIKQHITPESIVVDATCGNGNDTLFLAEQVPE
                     GHVYGFDIQDLALENTRDKVKDFNHVSLIKDGHENIEHHINDAHKGHIDAAIFNLGYL
                     PKGDKSIVTKPDTTIQAINSLLSLMSIEGIIVLVIYHGHSEGQIEKHALLDYLSTLDQ
                     KHAQVLQYQFLNQRNHAPFICAIEKIS"
BASE COUNT          563 a          257 c          305 g          487 t
ORIGIN      
        1 tagaactctt tttttataga aaggaaaatg acatatgggc aatcatttcc aatacgcttt
       61 tgaaaacaaa cgttatcaca catggaatta ccatttaaaa aataaatttg gacaaaaaat
      121 atttaaagtt gcattggatg gcgggtttga ctgtcctaac cgcgatggca ctgtagcaca
      181 tggtggatgt acattttgtt ctgctgcagg tagcggagac tttgcaggta atcgtgcaga
      241 ttcaatcgca gtacaattta aagaaattaa agaaaagatg catgagaaat ggcacgaagg
      301 aaaatatatt gcttattttc aggcatttac aaatacacat gcaccggttg aagtattaaa
      361 agaaaaattc gaacctgtac ttaaagaacc gggtgttgtg ggattatcta ttggtacgcg
      421 tcctgactgt ctaccagacg atgttgtcga atatttagca gatttgaatc aacgaacata
      481 cttatgggtt gaattaggac tacaaacaat ccatcagtca acatctgatt taatcaatcg
      541 tgcccatgat atgaaaactt attatgatgg tgtggcaaaa ttacgtaagc ataatatcaa
      601 tgtatgtaca cacatcatta atggcttacc tggcgaagac tatgacatga tgatggctac
      661 tgccaaagaa gttgcacaaa tggatgtaca aggtattaaa attcatttac ttcatttgtt
      721 aaaaggtaca ccgatggtaa aacaatacga taaaggttta ttaactttta tgactcaaga
      781 agagtacaca aacctagttg tggaccaatt agaagtgatt ccccctgaaa tgatcgttca
      841 ccgaattacc ggtgatggtc caatagatat catggtaggt ccaatgtgga gtgttaataa
      901 atgggaagta ttaaatggca tcgatgctga attagcacgt agaaattctt atcaaggctt
      961 gcgttacaag tctaaggtga agcaatgaaa ttagaacgta tactcccttt ttcaaaaaca
     1021 cttattaaac aacatataac accagaaagt attgttgtag acgcaacttg cggtaacggc
     1081 aatgacactt tatttttagc cgaacaagta ccagaaggac atgtttatgg tttcgacatt
     1141 caagatttag ctttggaaaa tacacgtgat aaagttaagg atttcaatca tgtttcttta
     1201 ataaaagatg gacatgaaaa tattgaacat catataaatg atgcacataa aggtcatatt
     1261 gatgcagcca tctttaacct aggttatttg cctaaaggtg ataaatctat cgtgacaaag
     1321 cctgacacga caatccaagc tattaattca ttgctatcat taatgtcaat tgaaggtatt
     1381 attgtacttg ttatatatca tggtcatagc gaaggacaaa ttgagaagca tgcattgctt
     1441 gattacttga gtactttgga tcaaaagcat gcgcaagttt tgcaatatca atttttaaac
     1501 caacgtaatc atgctccatt catttgtgcc atagaaaaaa tttcttaagc atttgctgcg
     1561 ctatactatt tataatttag gattgagtag tcaacatttg aaaaattaat gc
//
LOCUS       DALPQQ010000229         1611 bp    DNA     linear   BCT 22-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus strain K18-6-464
            SAMD00233528-rid16434743.denovo.233, whole genome shotgun sequence.
ACCESSION   DALPQQ010000229 DALPQQ010000000
VERSION     DALPQQ010000229.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMD00233528
            Sequence Read Archive: DRR236061
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 1611)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1611)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001543423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001543423.1
            Genome Coverage       :: 77x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/22/2022 17:09:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,811
            CDSs (total)                      :: 2,743
            Genes (coding)                    :: 2,689
            CDSs (with protein)               :: 2,689
            Genes (RNA)                       :: 68
            rRNAs                             :: 2, 4, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 4, 2 (16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 54
            CDSs (without protein)            :: 54
            Pseudo Genes (ambiguous residues) :: 0 of 54
            Pseudo Genes (frameshifted)       :: 27 of 54
            Pseudo Genes (incomplete)         :: 27 of 54
            Pseudo Genes (internal stop)      :: 10 of 54
            Pseudo Genes (multiple problems)  :: 10 of 54
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1611
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMD00233528-rid16434743.denovo.233"
                     /strain="K18-6-464"
                     /db_xref="taxon:1280"
                     /geo_loc_name="Japan: Niigata"
     gene            2..328
                     /locus_tag="O7798_002636"
     CDS             2..328
                     /locus_tag="O7798_002636"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019468012.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anti-sigma factor antagonist"
                     /protein_id="HDC2864820.1"
                     /translation="MNLNIETTTQDKFYEVKVGGELDVYTVPELEEVLTPMRQDGTRD
                     IYVNLENVSYMDSTGLGLFVGTLKALNQNDKELYILGVSDRIGRLFEITGLKDLMHVN
                     EGTEVE"
     gene            330..809
                     /gene="rsbW"
                     /locus_tag="O7798_002637"
     CDS             330..809
                     /gene="rsbW"
                     /locus_tag="O7798_002637"
                     /EC_number="2.7.11.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001190828.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anti-sigma B factor RsbW"
                     /protein_id="HDC2864821.1"
                     /translation="MQSKEDFIEMRVPASAEYVSLIRLTLSGVFSRAGATYDDIEDAK
                     IAVSEAVTNAVKHAYKENNNVGIINIYFEILEDKIKIVISDKGDSFDYETTKSKIGPY
                     DKDENIDFLREGGLGLFLIESLMDEVTVYKESGVTISMTKYIKKEQVRNNGERVEIS"
     gene            784..1554
                     /gene="sigB"
                     /locus_tag="O7798_002638"
     CDS             784..1554
                     /gene="sigB"
                     /locus_tag="O7798_002638"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500776.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase sigma factor SigB"
                     /protein_id="HDC2864822.1"
                     /translation="MAKESKSANEISPEQINQWIKEHQENKNTDAQDKLVKHYQKLIE
                     SLAYKYSKGQSHHEDLVQVGMVGLIGAINRFDMSFERKFEAFLVPTVIGEIKRYLRDK
                     TWSVHVPRRIKEIGPRIKKVSDELTAELERSPSISEIADRLEVSEEEVLEAMEMGQSY
                     NALSVDHSIEADKDGSTVTLLDIMGQQDDHYDLTEKRMILEKILPILSDREREIIQCT
                     FIEGLSQKETGERIGLSQMHVSRLQRTAIKKLQEAAHQ"
BASE COUNT          607 a          208 c          324 g          472 t
ORIGIN      
        1 aatgaatctt aatatagaaa caaccactca agataaattt tacgaagtta aagtcggtgg
       61 agaattagat gtttatactg tgcctgaatt agaagaggtt ttaacaccta tgagacaaga
      121 tggaactcgt gatatttatg ttaatttaga aaatgtgagt tatatggatt cgacaggttt
      181 aggtttattc gtaggtacat taaaagcatt aaaccaaaat gataaagaac tatacatttt
      241 aggtgtgtca gatcgtatcg gtagactatt tgaaattact ggtcttaagg atttaatgca
      301 tgttaatgaa ggaacggagg tcgaataaca tgcaatctaa agaagatttt atcgaaatgc
      361 gcgtgccagc atcggcagag tatgtaagtt taattcgttt aacactttct ggcgtttttt
      421 cgagagctgg tgctacatat gatgatattg aagatgccaa gattgcagtt agtgaagctg
      481 tgacaaatgc agttaaacat gcatacaaag aaaataacaa tgtgggcatt attaacatat
      541 attttgaaat tttagaagat aaaattaaaa ttgttatttc tgataaaggt gacagttttg
      601 attatgaaac aactaaatca aaaataggtc cttacgataa agacgaaaat atagactttt
      661 tacgcgaagg tggcctaggt ttatttttaa tcgaatcttt aatggatgaa gtcacagtat
      721 ataaagaatc tggtgtgaca atcagtatga ctaagtatat aaaaaaagag caggtgcgaa
      781 ataatggcga aagagtcgaa atcagctaat gaaatttcac ctgagcaaat taaccaatgg
      841 attaaagaac accaagaaaa taagaataca gatgcacagg ataagttagt taaacattac
      901 caaaaactaa ttgagtcatt ggcatataaa tattctaaag gacaatcaca tcacgaagat
      961 ttagttcaag ttggtatggt tggtttaata ggtgccataa atagattcga tatgtccttt
     1021 gaacggaagt ttgaagcctt tttagtacct actgtaatcg gtgaaatcaa aagatatcta
     1081 cgagataaaa cttggagtgt acatgttccg agacgtatta aagaaattgg gccaagaatc
     1141 aaaaaagtga gcgatgaact aaccgctgaa ttagagcgtt caccttctat cagtgaaata
     1201 gctgatcgat tagaagtctc agaagaagaa gtgttagaag caatggaaat gggacaaagt
     1261 tataatgcgt taagtgttga tcattccatt gaagctgata aagatggttc aactgttacg
     1321 ctattagata ttatggggca acaagatgac cattatgact taactgaaaa acgtatgatt
     1381 ttagaaaaaa tattacctat attatctgat cgcgaacgag aaatcataca atgtacgttt
     1441 attgaaggat tgagtcaaaa agagacaggt gagcgtatcg gtttaagtca aatgcatgta
     1501 tcacgacttc agagaacggc aattaagaaa ttacaagaag cagcacatca atagaatttg
     1561 tttattaatg atacgtttta taatgaaaaa tccatataat tatcccttga t
//
LOCUS       DALPQQ010000230         1608 bp    DNA     linear   BCT 22-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus strain K18-6-464
            SAMD00233528-rid16434743.denovo.234, whole genome shotgun sequence.
ACCESSION   DALPQQ010000230 DALPQQ010000000
VERSION     DALPQQ010000230.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMD00233528
            Sequence Read Archive: DRR236061
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 1608)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1608)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001543423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001543423.1
            Genome Coverage       :: 77x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/22/2022 17:09:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,811
            CDSs (total)                      :: 2,743
            Genes (coding)                    :: 2,689
            CDSs (with protein)               :: 2,689
            Genes (RNA)                       :: 68
            rRNAs                             :: 2, 4, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 4, 2 (16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 54
            CDSs (without protein)            :: 54
            Pseudo Genes (ambiguous residues) :: 0 of 54
            Pseudo Genes (frameshifted)       :: 27 of 54
            Pseudo Genes (incomplete)         :: 27 of 54
            Pseudo Genes (internal stop)      :: 10 of 54
            Pseudo Genes (multiple problems)  :: 10 of 54
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1608
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMD00233528-rid16434743.denovo.234"
                     /strain="K18-6-464"
                     /db_xref="taxon:1280"
                     /geo_loc_name="Japan: Niigata"
     gene            155..310
                     /locus_tag="O7798_002639"
     CDS             155..310
                     /locus_tag="O7798_002639"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499365.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDC2864823.1"
                     /translation="MMVKKLLKAIKQNFLYEQSNITFKMIVFGYKRLSKMLFQFEINH
                     INFLWEG"
     gene            318..839
                     /locus_tag="O7798_002640"
     CDS             318..839
                     /locus_tag="O7798_002640"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499366.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDC2864824.1"
                     /translation="MINIISAIGSIGTFIMALFYFVSVSVQLYQMKISFLPALGFNQI
                     LLEREEDQLNIMNSATEEHHHKDYIKLYNLGGGAAKKIAIEVLLGKDKVIQKKYVHIL
                     PSKEGYMLPINKNVYEELERTIENNGHEADLNVRMTYYHNVSRKQQEVILKGQIDRFN
                     TYNNKEIYDLQFI"
     gene            978..1508
                     /locus_tag="O7798_002641"
     CDS             978..1508
                     /locus_tag="O7798_002641"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499367.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetyltransferase"
                     /protein_id="HDC2864825.1"
                     /translation="MQIRQIHQHDFAQVDQLIRTAFENSEHGYGNESELVDQIRLSDT
                     YDNTLELVAVLQNEVVGHGLLSEVYLDNEAQREIGLVLAPVSVDIHHQNKGIGKRLIQ
                     ALEREAILKGYNFISVLGWPTYYANLGYQRASMYDIYPPYDGIPDEAFLIKELKVNSL
                     AGKTGTINYTSAFEKI"
BASE COUNT          606 a          184 c          294 g          524 t
ORIGIN      
        1 aaaaataaaa aaatcaactt atttgtatga gataaatatg tattgaagaa gacgtgttat
       61 taatttggaa aatactggtc aaagatggga gctcttaaaa gcgttattgt attttttagt
      121 caatacaaat agattgccgt aataataatc gtacttgatg gttaaaaaat tacttaaggc
      181 tataaagcaa aactttttat atgagcagtc gaatataacg tttaaaatga ttgtttttgg
      241 atataaacga ttaagtaaaa tgctttttca gtttgaaatt aatcatataa atttcttatg
      301 ggagggttga tatcttaatg attaacatta tttcagctat aggatctatt ggaacattta
      361 ttatggcttt attttatttt gtatcagttt cagttcaact ttatcaaatg aaaattagct
      421 ttctgccagc tttaggtttt aaccaaattt tattagaaag ggaggaggat caacttaata
      481 taatgaattc ggcaacagaa gagcatcatc ataaagatta tattaaacta tataatttag
      541 gtggcggtgc tgctaaaaaa attgcaatag aggttttatt ggggaaggat aaagtcattc
      601 agaaaaaata cgtgcatatt ttacctagta aagaagggta catgttacca attaataaaa
      661 atgtgtacga agaattagaa agaacgattg agaacaatgg tcatgaagct gatttgaatg
      721 tacgtatgac ttattatcat aatgtaagtc gcaaacaaca ggaagttata ttaaaaggtc
      781 aaatcgaccg ttttaatact tataataata aagaaattta tgatttgcag tttatctaaa
      841 aattgattta agagggtagt tgtttattgc gaaaaatatc attcaatttt aatgaaataa
      901 tggcgtcatt actataaaat attactttat gttgtaatgc atttttctat aagatagaac
      961 taaaaggagg ggcaaagatg caaattagac aaatacatca acatgacttt gctcaagtgg
     1021 accagttaat tagaacggca tttgaaaata gtgaacatgg ttatggtaat gaatcagagc
     1081 tagtagacca aattcgtcta agtgatacgt atgacaatac cttagaatta gtagctgttc
     1141 ttcaaaatga agttgtaggg cacggtttac taagtgaagt ttatcttgat aacgaggcac
     1201 aacgggaaat tggattagtg ttagcacctg tatctgttga tattcatcat caaaataaag
     1261 gtattgggaa gcgattgatt caagcattag aacgagaagc aatattaaaa ggatataatt
     1321 ttatcagtgt attaggatgg ccgacgtatt atgccaatct aggatatcaa cgcgcaagta
     1381 tgtacgacat ttatccacca tatgatggta taccagacga agcgttttta attaaagaat
     1441 taaaagtgaa cagtttagcg ggaaaaacag gtaccataaa ttacacatct gcttttgaaa
     1501 aaatatgatt tcaagctagg attacattag gtagagttca tattaataat aaaaaatgtt
     1561 tgcaatcaaa tcgtacgttg tcgtttgtaa ttcttaaaat agcaataa
//
LOCUS       DALPQQ010000231         1542 bp    DNA     linear   BCT 22-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus strain K18-6-464
            SAMD00233528-rid16434743.denovo.237, whole genome shotgun sequence.
ACCESSION   DALPQQ010000231 DALPQQ010000000
VERSION     DALPQQ010000231.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMD00233528
            Sequence Read Archive: DRR236061
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 1542)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1542)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001543423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001543423.1
            Genome Coverage       :: 77x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/22/2022 17:09:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,811
            CDSs (total)                      :: 2,743
            Genes (coding)                    :: 2,689
            CDSs (with protein)               :: 2,689
            Genes (RNA)                       :: 68
            rRNAs                             :: 2, 4, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 4, 2 (16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 54
            CDSs (without protein)            :: 54
            Pseudo Genes (ambiguous residues) :: 0 of 54
            Pseudo Genes (frameshifted)       :: 27 of 54
            Pseudo Genes (incomplete)         :: 27 of 54
            Pseudo Genes (internal stop)      :: 10 of 54
            Pseudo Genes (multiple problems)  :: 10 of 54
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1542
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMD00233528-rid16434743.denovo.237"
                     /strain="K18-6-464"
                     /db_xref="taxon:1280"
                     /geo_loc_name="Japan: Niigata"
     gene            284..790
                     /locus_tag="O7798_002642"
     CDS             284..790
                     /locus_tag="O7798_002642"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499657.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDC2864826.1"
                     /translation="MIIKILTILLLLCILSYLVTNRKKPFLFLKTLFMGVVFIFIGYI
                     SLAISAVIIYGIIQFITIDFGSFFLMGIILILISSIFQLFIVRLLFRKKNVDLTEVVV
                     LEHLIQWFLVYFAIYQAVNEKMDINDINIDNFQSVFFDVSNLNLVILPTLIISWVTIF
                     NYRMRSYK"
     gene            1049..>1542
                     /gene="efb"
                     /locus_tag="O7798_002643"
     CDS             1049..>1542
                     /gene="efb"
                     /locus_tag="O7798_002643"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499658.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="complement convertase inhibitor Efb"
                     /protein_id="HDC2864827.1"
                     /translation="MKNKLIAKSLLTLAAIGITTTTIASTADASEGYGPREKKPVSIN
                     HNIVEYNDGTFKYQSRPKFNSTPKYIKFKHDYNILEFNDGTFEYGARPQFNKPAAKTD
                     ATIKKEQKLIQAQNLVREFEKTHTVSAHRKAQKAVNLVSFEYKVKKMVLQERIDNVLK
                     QGLV"
BASE COUNT          584 a          178 c          239 g          541 t
ORIGIN      
        1 taatatgtat aattttactt ataaagaaat aagagatata ttctaattat ggttgatatg
       61 ttatgattaa tatataagtt aaaaattata ctatttaatt gaattatgca ttttcgaagt
      121 aaacataatt caacacttac atttttaaat agataaaata gtgtaaaatc acgtgccaag
      181 attactatag agtaggcatt gagtattatt ggcaatcact taagtgattg ttatttttcg
      241 tggtcaataa taaagatata aataaatata ttgaggtcaa acgatgataa ttaaaatttt
      301 aacaattcta ttactacttt gtatattgag ctatttggtt acaaatagaa agaagccttt
      361 tctgttctta aagacactct ttatgggtgt ggtatttatc tttataggat atatttcact
      421 ggcaatatct gccgtaatta tttatggtat tattcaattt atcacaattg attttggtag
      481 ttttttctta atgggtatta tattgatctt gatttcaagt atattccaat tatttatagt
      541 tagattactt tttagaaaaa agaatgtcga tttgacagag gttgtcgttt tagagcattt
      601 aattcaatgg ttcttagttt actttgcgat ctatcaagca gtaaatgaaa aaatggacat
      661 taatgatatt aatatcgaca atttccaatc tgtctttttt gacgtgtcta atttgaattt
      721 agtaattcta ccaacgttaa tcattagctg ggtcacaata tttaactata gaatgagaag
      781 ttacaaataa aatctatgag attatacctt cagacaccaa cattcaaatg gtgtcttttt
      841 tgttgtgtgg ttttattttt gaaattcgaa aaagtagagg catgaatttt ttgactagtg
      901 tataagtgct gatgagtcac aagatagata gctatatttt gtctatatta taaagtgttt
      961 atagttaatt aataattagt taatttcaaa agttgtataa ataggataac ttaataaatg
     1021 taagataata atttggagga taattaacat gaaaaataaa ttgatagcaa aatctttatt
     1081 aacattagcg gcaataggta ttactacaac tacaattgcg tcaacagcag atgcgagcga
     1141 aggatacggt ccaagagaaa agaaaccagt gagtattaat cacaatatcg tagagtacaa
     1201 tgatggtact tttaaatatc aatctagacc aaaatttaac tcaacaccta aatatattaa
     1261 attcaaacat gactataata ttttagaatt taacgatggt acattcgaat atggtgcacg
     1321 tccacaattt aataaaccag cagcgaaaac tgatgcaact attaaaaaag aacaaaaatt
     1381 gattcaagct caaaatcttg tgagagaatt tgaaaaaaca catactgtca gtgcacacag
     1441 aaaagcacaa aaggcagtca acttagtttc gtttgaatac aaagtgaaga aaatggtctt
     1501 acaagagcga attgataatg tattaaaaca aggattagtt aa
//
LOCUS       DALPQQ010000232         1530 bp    DNA     linear   BCT 22-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus strain K18-6-464
            SAMD00233528-rid16434743.denovo.238, whole genome shotgun sequence.
ACCESSION   DALPQQ010000232 DALPQQ010000000
VERSION     DALPQQ010000232.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMD00233528
            Sequence Read Archive: DRR236061
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 1530)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1530)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001543423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001543423.1
            Genome Coverage       :: 77x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/22/2022 17:09:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,811
            CDSs (total)                      :: 2,743
            Genes (coding)                    :: 2,689
            CDSs (with protein)               :: 2,689
            Genes (RNA)                       :: 68
            rRNAs                             :: 2, 4, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 4, 2 (16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 54
            CDSs (without protein)            :: 54
            Pseudo Genes (ambiguous residues) :: 0 of 54
            Pseudo Genes (frameshifted)       :: 27 of 54
            Pseudo Genes (incomplete)         :: 27 of 54
            Pseudo Genes (internal stop)      :: 10 of 54
            Pseudo Genes (multiple problems)  :: 10 of 54
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1530
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMD00233528-rid16434743.denovo.238"
                     /strain="K18-6-464"
                     /db_xref="taxon:1280"
                     /geo_loc_name="Japan: Niigata"
     gene            13..1452
                     /locus_tag="O7798_002644"
                     /note="aph(2'')-Ia"
     CDS             13..1452
                     /locus_tag="O7798_002644"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002390775.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminoglycoside O-phosphotransferase APH(2'')-Ia"
                     /protein_id="HDC2864828.1"
                     /translation="MNIVENEICIRTLIDDDFPLMLKWLTDERVLEFYGGRDKKYTLE
                     SLKKHYTEPWEDEVFRVIIEYNNVPIGYGQIYKMYDELYTDYHYPKTDEIVYGMDQFI
                     GEPNYWSKGIGTRYIKLIFEFLKKERNANAVILDPHKNNPRAIRAYQKSGFRIIEDLP
                     EHELHEGKKEDCYLMEYRYDDNATNVKAMKYLIEHYFDNFKVDSIEIIGSGYDSVAYL
                     VNNEYIFKTKFSTNKKKGYAKEKAIYNFLNTNLETNVKIPNIEYSYISDELSILGYKE
                     IKGTFLTPEIYSTMSEEEQNLLKRDIASFLRQMHGLDYTDISECTIDNKQNVLEEYIL
                     LRETIYNDLTDIEKDYIESFMERLNATTVFEGKKCLCHNDFSCNHLLLDGNNRLTGII
                     DFGDSGIIDEYCDFIYLLEDSEEEIGTNFGEDILRMYGNIDIEKAKEYQDIVEEYYPI
                     ETIVYGIKNIKQEFIENGRKEIYKRTYKD"
BASE COUNT          657 a          108 c          261 g          504 t
ORIGIN      
        1 ggtgataaat aaatgaatat agttgaaaat gaaatatgta taagaacttt aatagatgat
       61 gattttcctt tgatgttaaa atggttaact gatgaaagag tattagaatt ttatggtggt
      121 agagataaaa aatatacatt agaatcatta aaaaaacatt atacagagcc ttgggaagat
      181 gaagttttta gagtaattat tgaatataac aatgttccta ttggatatgg acaaatatat
      241 aaaatgtatg atgagttata tactgattat cattatccaa aaactgatga gatagtctat
      301 ggtatggatc aatttatagg agagccaaat tattggagta aaggaattgg tacaagatat
      361 attaaattga tttttgaatt tttgaaaaaa gaaagaaatg ctaatgcagt tattttagac
      421 cctcataaaa ataatccaag agcaataagg gcataccaaa aatctggttt tagaattatt
      481 gaagatttgc cagaacatga attacacgag ggcaaaaaag aagattgtta tttaatggaa
      541 tatagatatg atgataatgc cacaaatgtt aaggcaatga aatatttaat tgagcattac
      601 tttgataatt tcaaagtaga tagtattgaa ataatcggta gtggttatga tagtgtggca
      661 tatttagtta ataatgaata catttttaaa acaaaattta gtactaataa gaaaaaaggt
      721 tatgcaaaag aaaaagcaat atataatttt ttaaatacaa atttagaaac taatgtaaaa
      781 attcctaata ttgaatattc gtatattagt gatgaattat ctatactagg ttataaagaa
      841 attaaaggaa cttttttaac accagaaatt tattctacta tgtcagaaga agaacaaaat
      901 ttgttaaaac gagatattgc cagtttttta agacaaatgc acggtttaga ttatacagat
      961 attagtgaat gtactattga taataaacaa aatgtattag aagagtatat attgttgcgt
     1021 gaaactattt ataatgattt aactgatata gaaaaagatt atatagaaag ttttatggaa
     1081 agactaaatg caacaacagt ttttgagggt aaaaagtgtt tatgccataa tgattttagt
     1141 tgtaatcatc tattgttaga tggcaataat agattaactg gaataattga ttttggagat
     1201 tctggaatta tagatgaata ttgtgatttt atatacttac ttgaagatag tgaagaagaa
     1261 ataggaacaa attttggaga agatatatta agaatgtatg gaaatataga tattgagaaa
     1321 gcaaaagaat atcaagatat agttgaagaa tattatccta ttgaaactat tgtttatgga
     1381 attaaaaata ttaaacagga atttatcgaa aatggtagaa aagaaattta taaaaggact
     1441 tataaagatt gattatataa tatatgaaaa gctattataa aagacattag tattaaatag
     1501 tttaaaaaaa tgaaaaataa taaaggaagt
//
LOCUS       DALPQQ010000233         1514 bp    DNA     linear   BCT 22-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus strain K18-6-464
            SAMD00233528-rid16434743.denovo.239, whole genome shotgun sequence.
ACCESSION   DALPQQ010000233 DALPQQ010000000
VERSION     DALPQQ010000233.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMD00233528
            Sequence Read Archive: DRR236061
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 1514)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1514)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001543423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001543423.1
            Genome Coverage       :: 77x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/22/2022 17:09:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,811
            CDSs (total)                      :: 2,743
            Genes (coding)                    :: 2,689
            CDSs (with protein)               :: 2,689
            Genes (RNA)                       :: 68
            rRNAs                             :: 2, 4, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 4, 2 (16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 54
            CDSs (without protein)            :: 54
            Pseudo Genes (ambiguous residues) :: 0 of 54
            Pseudo Genes (frameshifted)       :: 27 of 54
            Pseudo Genes (incomplete)         :: 27 of 54
            Pseudo Genes (internal stop)      :: 10 of 54
            Pseudo Genes (multiple problems)  :: 10 of 54
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1514
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMD00233528-rid16434743.denovo.239"
                     /strain="K18-6-464"
                     /db_xref="taxon:1280"
                     /geo_loc_name="Japan: Niigata"
     gene            61..363
                     /locus_tag="O7798_002645"
     CDS             61..363
                     /locus_tag="O7798_002645"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500403.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDC2864829.1"
                     /translation="MSRSKKYFYLSSLMIILSFFFNTNNVFLSGLFNSFIKLILFCSV
                     INSIVLILSIIFADRSIKSLKPDADWIRIASKSLPWIILIVILVHIFSIVRTFGFI"
     gene            619..984
                     /gene="crcB"
                     /locus_tag="O7798_002646"
     CDS             619..984
                     /gene="crcB"
                     /locus_tag="O7798_002646"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500404.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fluoride efflux transporter CrcB"
                     /protein_id="HDC2864830.1"
                     /translation="MQYVYIFIGGALGALLRYLISFLNTDGGFPIGTLIANLTGAFVM
                     GLLTALTIAFFSNHPTLKKAITTGFLGALTTFSTFQLELIHMFDHQQFITLLLYAVTS
                     YVFGILLCYVGIKLGGGLS"
     gene            981..1334
                     /locus_tag="O7798_002647"
     CDS             981..1334
                     /locus_tag="O7798_002647"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500405.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CrcB family protein"
                     /protein_id="HDC2864831.1"
                     /translation="MISIILVMIGGGFGAIARSAITDYFNHKFTSKLPIATLIVNLVG
                     SFLIGLTIGLSISISWFPAFFVTGFLGGLTTFSTLAKELTLMMTPKFNINLFLNYSLL
                     QFIIGFIACYISYHI"
BASE COUNT          472 a          236 c          217 g          589 t
ORIGIN      
        1 tattgtttta tgattgttta tgatacgata tgtaaatgat aatcatccag gaggtctagc
       61 atgtctcgtt caaaaaaata cttttactta tctagcttaa tgattatttt aagctttttc
      121 tttaatacaa ataacgtttt cctaagtgga ctttttaatt cttttattaa attaatactt
      181 ttctgcagtg ttattaactc aattgtacta attttgtcta taatttttgc agatcgttca
      241 attaaatcac taaagcctga tgcagattgg attagaattg cgagtaaaag tttgccttgg
      301 attattctaa ttgttatttt agtacatatc ttttcaattg ttcgtacatt cggttttatt
      361 taaaaaagtt aatatgtcat tgtagcctta atacaaaaca atacaatgta tcatgctata
      421 atgagtaaaa caatttgata acgttgttgc gtataaaaaa tattagattt tcgaaatcat
      481 aactatgcat ctaatcgcta tagttataca acaagatata acatataatg aggtttgata
      541 atgcatcgac aatttttgtc gtcgcgttgc caaaacctct tttttaaatt caaactactt
      601 cttttcgagg tgaaccaaat gcaatatgta tatattttta tcggtggtgc tttaggcgct
      661 ttattacgtt acctcatttc ttttctgaat actgacggag gttttccaat cggaacactg
      721 atagccaatt tgactggtgc ctttgtaatg ggattgctaa cagccttaac aattgcattt
      781 ttttcaaacc atccgaccct aaaaaaagct attacgactg gttttcttgg tgctttaacg
      841 actttttcaa catttcaatt agaattaata catatgtttg atcatcaaca atttataact
      901 ttactactat atgctgtaac aagttatgtc tttggtattt tgttatgtta cgtcggtata
      961 aaactaggtg gtggtttatc atgatatcaa tcattttagt catgattggc ggcggttttg
     1021 gcgcaattgc tagaagtgcc attactgatt attttaatca taaatttact tcaaagttac
     1081 ctatcgcaac attgatagta aatctagttg gtagtttttt aattggatta actataggct
     1141 tatcaatttc aatctcatgg ttccctgcgt tctttgttac cggtttttta ggtggcttaa
     1201 caactttctc aacgttagcc aaagaactta cactaatgat gacgccaaaa tttaatatta
     1261 acctttttct caattattca cttttacaat tcatcattgg atttatagct tgttatatta
     1321 gctatcatat ttaaaaataa aatgcttcat tcagcaaata ggtaaattac gacaccttcc
     1381 tgaacgaagc attttttaat tttcatgcaa atttttaagc accatataat gcctaccaaa
     1441 tttcaataat ctttgttgcc gtttaaataa tgtgaatgtc aataaattct ccaaactagt
     1501 cgaaaataaa ggga
//
LOCUS       DALPQQ010000234         1514 bp    DNA     linear   BCT 22-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus strain K18-6-464
            SAMD00233528-rid16434743.denovo.240, whole genome shotgun sequence.
ACCESSION   DALPQQ010000234 DALPQQ010000000
VERSION     DALPQQ010000234.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMD00233528
            Sequence Read Archive: DRR236061
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 1514)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1514)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001543423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001543423.1
            Genome Coverage       :: 77x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/22/2022 17:09:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,811
            CDSs (total)                      :: 2,743
            Genes (coding)                    :: 2,689
            CDSs (with protein)               :: 2,689
            Genes (RNA)                       :: 68
            rRNAs                             :: 2, 4, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 4, 2 (16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 54
            CDSs (without protein)            :: 54
            Pseudo Genes (ambiguous residues) :: 0 of 54
            Pseudo Genes (frameshifted)       :: 27 of 54
            Pseudo Genes (incomplete)         :: 27 of 54
            Pseudo Genes (internal stop)      :: 10 of 54
            Pseudo Genes (multiple problems)  :: 10 of 54
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1514
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMD00233528-rid16434743.denovo.240"
                     /strain="K18-6-464"
                     /db_xref="taxon:1280"
                     /geo_loc_name="Japan: Niigata"
     gene            <1..835
                     /locus_tag="O7798_002648"
     CDS             <1..835
                     /locus_tag="O7798_002648"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001594836.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="DMT family transporter"
                     /protein_id="HDC2864832.1"
                     /translation="LISAIGFSFMSVFFRLAGDLPVFQKSLARNLVAMFIPLFFIYKY
                     HQPMFGRLSSQPLLITRSTLGLIGVLLNIYAIDHMVLSDADSLMKLNPFWTILLSIVF
                     LHEKVRKYQITAMIIAILGMLLIVKPEFSSSMIPSLAGLFSGIFAASAYTCVRALSTR
                     EAPYTIVFYFSLFSVIVLIPFTAYTYEPMSQMQILYLLGAGLAAAVGQIGVTLAYSFA
                     AAKDISIFTYASIIFTAILGFILFGESPDFYATLGYVVIIGASYYMFEKARRDAKIIK
                     K"
     gene            855..1355
                     /gene="queF"
                     /locus_tag="O7798_002649"
     CDS             855..1355
                     /gene="queF"
                     /locus_tag="O7798_002649"
                     /EC_number="1.7.1.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499299.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADPH-dependent 7-cyano-7-deazaguanine reductase
                     QueF"
                     /protein_id="HDC2864833.1"
                     /translation="MAHGRQQDELQDITLLGNQDNTYNFDYRPDVLESFDNKHQGRDY
                     FVKFNCPEFTSLCPITGQPDFATIYISYIPNVKMVESKSLKLYLFSFRNHGDFHEDCM
                     NIIMNDLIELMDPHYIEVWGKFTPRGGISIDPYTNYGRPNSKYEKMAEHRLMNHDLYP
                     EKIDNR"
BASE COUNT          495 a          245 c          234 g          540 t
ORIGIN      
        1 tttaatttcg gctattggtt tcagttttat gtcagtgttt ttcagacttg caggtgacct
       61 tcctgttttt caaaaatcat tagcacgaaa cttagtagca atgtttattc cattattttt
      121 tatatataaa taccatcagc caatgtttgg cagactttca agtcaaccct tattaataac
      181 acgatcaaca cttggactta ttggtgtatt gttaaatatt tatgccattg atcatatggt
      241 acttagtgat gccgattcat taatgaaact caatcctttc tggacgattt tattaagcat
      301 tgttttctta catgaaaagg taaggaagta tcaaattaca gcaatgataa ttgctatttt
      361 aggtatgctt ttaatagtga aacctgaatt ttcatcatct atgattccat cattagctgg
      421 cttattctca ggtatttttg cagcatcagc atatacatgt gttcgagcac ttagtacaag
      481 agaagcacca tatactatag tattttactt ctccttattt tctgtcatcg ttttaatacc
      541 tttcactgca tatacttatg aaccaatgag tcagatgcaa atactttatc tattaggggc
      601 tggcttagct gccgctgtgg gtcaaattgg tgttacttta gcatatagtt ttgcagcagc
      661 aaaagatatt tctattttta cgtatgcatc tataattttc acagcaatac ttggatttat
      721 tctattcgga gaatctccag atttctatgc aacattaggt tacgtcgtta ttatcggtgc
      781 aagttattac atgtttgaaa aagcacgccg agacgccaaa ataataaaaa aataaattta
      841 aaggagcgct ttatatggca catggccgtc aacaagatga attacaagat ataactttat
      901 taggaaatca agacaatact tacaattttg actatcgtcc tgatgtatta gaatcgtttg
      961 ataataagca tcaaggtcgt gactatttcg taaaattcaa ctgtccagaa tttacatcat
     1021 tatgtccaat tactgggcaa ccagattttg caactatcta tatttcatat attccaaatg
     1081 ttaaaatggt tgaatcaaaa tctttgaaat tatacttatt tagtttcaga aatcacggtg
     1141 attttcacga agattgtatg aatattatta tgaatgattt gatagagctt atggacccac
     1201 attatattga agtctggggc aagttcacac cacgtggtgg aatttctatt gatccttata
     1261 caaactatgg acgtccaaat tctaaatatg aaaaaatggc tgagcatcgt ttgatgaatc
     1321 atgatttata tcccgaaaaa atagataatc gttaaatgta tcatttaata aacacaccaa
     1381 taagttgatt ttcctaactt attggtgtgt ttttcattta gcatacataa taggttacat
     1441 taaaataaca ttttatacca aagtacacca aaagaatatt agtacacgaa ttaaacaaca
     1501 tttttataga aacc
//
LOCUS       DALPQQ010000235         1506 bp    DNA     linear   BCT 22-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus strain K18-6-464
            SAMD00233528-rid16434743.denovo.241, whole genome shotgun sequence.
ACCESSION   DALPQQ010000235 DALPQQ010000000
VERSION     DALPQQ010000235.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMD00233528
            Sequence Read Archive: DRR236061
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 1506)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1506)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001543423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001543423.1
            Genome Coverage       :: 77x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/22/2022 17:09:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,811
            CDSs (total)                      :: 2,743
            Genes (coding)                    :: 2,689
            CDSs (with protein)               :: 2,689
            Genes (RNA)                       :: 68
            rRNAs                             :: 2, 4, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 4, 2 (16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 54
            CDSs (without protein)            :: 54
            Pseudo Genes (ambiguous residues) :: 0 of 54
            Pseudo Genes (frameshifted)       :: 27 of 54
            Pseudo Genes (incomplete)         :: 27 of 54
            Pseudo Genes (internal stop)      :: 10 of 54
            Pseudo Genes (multiple problems)  :: 10 of 54
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1506
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMD00233528-rid16434743.denovo.241"
                     /strain="K18-6-464"
                     /db_xref="taxon:1280"
                     /geo_loc_name="Japan: Niigata"
     gene            complement(<1..296)
                     /locus_tag="O7798_002650"
     CDS             complement(<1..296)
                     /locus_tag="O7798_002650"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499158.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF443 family protein"
                     /protein_id="HDC2864834.1"
                     /translation="METLLCESKVINKNPKYRIIKYDSEYLMIDLASNWIVFFFPFIN
                     WLIPKTYVKITKNDYEKLNIVKPVKNKSIGWTIFAGIVLLGGTVRRNTYLFDFQ"
     gene            complement(427..1050)
                     /locus_tag="O7798_002651"
     CDS             complement(427..1050)
                     /locus_tag="O7798_002651"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499165.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF443 domain-containing protein"
                     /protein_id="HDC2864835.1"
                     /translation="MLLCESKIINKNPKYRIIKYNDEYLMVDIISTWISLFFPFINWF
                     IPKEYVKISREEFENLNIVKPAKKNVFWPVAGSSALLGVALRKYTHLLDIQLDKKLVI
                     AICCITFIGILIFYVRLIKKSSLNICNTKNKRSKIFLIPTLKNVCFTLFGYILFGGLT
                     MLFLDALLSMSYQNIIVYFAWITAIMGFFLVNIALIIDKNIHVILKN"
     gene            complement(1074..1319)
                     /locus_tag="O7798_002652"
     CDS             complement(1074..1319)
                     /locus_tag="O7798_002652"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDC2864836.1"
                     /translation="MYYLKLTRWKNDGLAGFTAGSISAILVYWTNQKNEFGIKDKNDW
                     IGHKLDVGIDAVEKSAEKTVDGVENVMVKLQKVFLII"
     gene            complement(1285..>1506)
                     /locus_tag="O7798_002653"
     CDS             complement(1285..>1506)
                     /locus_tag="O7798_002653"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499163.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF443 family protein"
                     /protein_id="HDC2864837.1"
                     /translation="FPSLKNFCFTIFYYFLFGGLSIMALSMLLTLNPQNIIGFIGWLV
                     MTAGFFLLNMSSIIDKKIYVLSKTNTVEK"
BASE COUNT          536 a          234 c          178 g          558 t
ORIGIN      
        1 aattgaaaat caaataaata agtatttctt cttacagtac caccaagtaa cacaataccc
       61 gcgaatatgg tccatcctat cgatttattt ttaactggtt tgacaatatt taatttttca
      121 taatcattct tagtgatttt gacatatgtt ttcggtatga gccagttaat aaatggaaag
      181 aagaagacaa tccaattact tgccaaatca atcattaaat attcactatc gtatttgatt
      241 attcgatatt tagggttttt attaataact ttagattcgc aaagcaatgt ctccacatcc
      301 ctttaatttt atgtgtaata catttttcga tacttcaaaa gacattcaaa tactatcaag
      361 ttactgtcat caaaggtttt attaactgat attttcatat ttttaatctg aatttagtac
      421 tttcacttaa tttttaagta tgacatgaat gtttttatct ataattaaag ctatattcac
      481 tagaaaaaaa cccattattg ctgtaatcca agcaaaatat actattatgt tttgataact
      541 cattgataat agtgcatcta ggaatagcat agtcaatccg ccaaataaaa tatatccaaa
      601 taatgtgaaa caaacatttt ttagtgtagg tattaaaaaa atttttgacc ttttattttt
      661 agtattacaa atatttaaag atgatttttt aattaggcgt acataaaata ttaaaatccc
      721 tataaatgtg atgcaacata tggcaataac taatttttta tcaagttgaa tgtcaagtaa
      781 atgtgtatat tttcttaatg caactcccag caaagcagag ctacctgcaa ctggccaaaa
      841 aacattcttt ttagcaggtt taacaatatt taagttttca aactcttctc tactaatttt
      901 gacgtattct tttgggatga accaattaat aaaaggaaaa aataaactaa tccaagtgct
      961 tattatatcg accattaagt attcatcatt atatttaata attctatatt ttgggttttt
     1021 attgatgatt ttagattcgc atagcaacat ttaccagctc catttcttag ggcttatatg
     1081 attagaaata ctttttgaag cttcaccatg acattttcaa caccatctac tgttttttct
     1141 gcagattttt ctacagcatc tataccaacg tctagtttat gtcctatcca atcgttttta
     1201 tcttttattc caaattcatt tttttgattg gtccaatata caagtattgc cgaaatagaa
     1261 cctgcagtaa atccagctaa accatcattt ttccaccgtg ttagttttag ataatacata
     1321 aatttttttg tcaataatcg atgacatgtt taacagaaag aaacctgcag tcattaccaa
     1381 ccaaccaata aagcctatta tattttgagg atttaaagtt aataacatac ttagagccat
     1441 tattgaaaga ccgccaaata aaaaataata aaatattgtg aaacaaaagt tttttaatga
     1501 aggaaa
//
LOCUS       DALPQQ010000236         1496 bp    DNA     linear   BCT 22-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus strain K18-6-464
            SAMD00233528-rid16434743.denovo.242, whole genome shotgun sequence.
ACCESSION   DALPQQ010000236 DALPQQ010000000
VERSION     DALPQQ010000236.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMD00233528
            Sequence Read Archive: DRR236061
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 1496)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1496)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001543423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001543423.1
            Genome Coverage       :: 77x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/22/2022 17:09:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,811
            CDSs (total)                      :: 2,743
            Genes (coding)                    :: 2,689
            CDSs (with protein)               :: 2,689
            Genes (RNA)                       :: 68
            rRNAs                             :: 2, 4, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 4, 2 (16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 54
            CDSs (without protein)            :: 54
            Pseudo Genes (ambiguous residues) :: 0 of 54
            Pseudo Genes (frameshifted)       :: 27 of 54
            Pseudo Genes (incomplete)         :: 27 of 54
            Pseudo Genes (internal stop)      :: 10 of 54
            Pseudo Genes (multiple problems)  :: 10 of 54
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1496
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMD00233528-rid16434743.denovo.242"
                     /strain="K18-6-464"
                     /db_xref="taxon:1280"
                     /geo_loc_name="Japan: Niigata"
     gene            13..1239
                     /gene="ftsW"
                     /locus_tag="O7798_002654"
     CDS             13..1239
                     /gene="ftsW"
                     /locus_tag="O7798_002654"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499609.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsW"
                     /protein_id="HDC2864838.1"
                     /translation="MKNFRSILRYIGKTSKFIDYPLLVTYIVLSLIGLVMVYSASMVP
                     ATKGTLTGGIDVPGTYFYNRQLAYVIMSFIIVFFIAFLMNVKLLSNIKVQKGMIITIV
                     SLLLLTLVIGKDINGSKSWINLGFMNLQASELLKIAIILYIPFMISKKMPRVLSKPKL
                     ILSPIVLALGCTFLVFLQKDVGQTLLILIILVAIIFYSGIGVNKVLRFGIPAVLGFLV
                     VFVIALMAGWLPSYLTARFSTLTDPFQFESGTGYHISNSLLAIGNGGVFGKGLGNSAM
                     KLGYLPEPHTDFIFAIICEELGLIGGLLVITLEFFIVYRAFQFANKTSSYFYKLVCVG
                     IATYFGSQTFVNIGGISATIPLTGVPLPFISFGGSSMISLSIAMGLLLIVGKQIKVDQ
                     QRKKQQQKVDIRRQFN"
BASE COUNT          508 a          198 c          263 g          527 t
ORIGIN      
        1 atgactgaat atatgaagaa ttttagaagt attttacggt atattggtaa aacctcaaag
       61 tttattgatt atccgttatt agttacatat attgtattga gtttaattgg attagtgatg
      121 gtatatagtg caagtatggt tccagcaact aaaggcacat tgactggtgg tatcgatgtt
      181 ccaggaacgt atttttacaa ccgacaatta gcatatgtca taatgagttt tataattgta
      241 ttttttattg catttttaat gaatgttaaa ttactgagta atattaaagt gcaaaaaggt
      301 atgattataa ctatcgtctc actattatta ctgacgttag taataggtaa agatattaat
      361 ggttctaaaa gttggataaa cttaggattt atgaacttac aggcatctga gttattaaaa
      421 attgcaatca tattatatat cccatttatg atcagtaaaa aaatgcctag agtattaagt
      481 aaaccaaaat taattttaag tcctattgta ttagcattag gttgtacgtt tttagttttc
      541 ctacaaaaag acgtagggca aacattacta atattaatta ttttagttgc gatcattttt
      601 tattcaggaa ttggggtaaa caaagtccta agatttggta taccagcagt gctaggattc
      661 ttagtagtat ttgtcattgc attaatggct ggttggttac caagttattt aactgccaga
      721 tttagtacgc taacagatcc attccaattc gaatcaggaa ctggatacca tatttccaat
      781 tcattgcttg cgataggtaa cggtggcgta tttggaaaag gattaggaaa tagtgcaatg
      841 aaattgggct atttaccaga accacataca gattttattt ttgcaattat ttgcgaagaa
      901 ttaggtctaa tcggaggatt gctagttatt actttagagt tctttattgt atatcgtgcc
      961 ttccagtttg caaataaaac atcatcatat ttttataaac ttgtgtgtgt tgggattgcc
     1021 acatactttg gaagtcaaac gtttgtaaac attggcggta tttcggcaac aattccatta
     1081 actggtgtgc cattgccatt tatcagcttt ggtggatcat caatgattag tttaagtatt
     1141 gctatgggtt tacttctgat tgtaggtaaa caaatcaaag tagaccagca acgaaagaaa
     1201 caacaacaaa aagttgatat aagaagacaa tttaattaaa aaaatactag ccaatattta
     1261 gtacgagatg acttctgtca ttaagcaatg ctaaacattg gctatttata tactctttgt
     1321 caaattggac tgatgagttc aataacggaa gttaggcaac caaacaacgc ttaacttcct
     1381 ttttgttttg atattacgag attactcatg attatcaaat tttataaaca aaacaacgta
     1441 taattataac taaattttat gactaaaaat tactaaatgt ggtggcgaaa ttagaa
//
LOCUS       DALPQQ010000237         1475 bp    DNA     linear   BCT 22-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus strain K18-6-464
            SAMD00233528-rid16434743.denovo.244, whole genome shotgun sequence.
ACCESSION   DALPQQ010000237 DALPQQ010000000
VERSION     DALPQQ010000237.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMD00233528
            Sequence Read Archive: DRR236061
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 1475)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1475)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001543423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001543423.1
            Genome Coverage       :: 77x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/22/2022 17:09:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,811
            CDSs (total)                      :: 2,743
            Genes (coding)                    :: 2,689
            CDSs (with protein)               :: 2,689
            Genes (RNA)                       :: 68
            rRNAs                             :: 2, 4, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 4, 2 (16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 54
            CDSs (without protein)            :: 54
            Pseudo Genes (ambiguous residues) :: 0 of 54
            Pseudo Genes (frameshifted)       :: 27 of 54
            Pseudo Genes (incomplete)         :: 27 of 54
            Pseudo Genes (internal stop)      :: 10 of 54
            Pseudo Genes (multiple problems)  :: 10 of 54
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1475
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMD00233528-rid16434743.denovo.244"
                     /strain="K18-6-464"
                     /db_xref="taxon:1280"
                     /geo_loc_name="Japan: Niigata"
     gene            88..273
                     /locus_tag="O7798_002655"
     CDS             88..273
                     /locus_tag="O7798_002655"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499908.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDC2864839.1"
                     /translation="MKNTAMRALNFAVKIKNNIRQLYAQNHRLLSYTAVTIISKEMEY
                     SAIVVFVLTFLYFTWLT"
     gene            444..1430
                     /locus_tag="O7798_002656"
     CDS             444..1430
                     /locus_tag="O7798_002656"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499907.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HDC2864840.1"
                     /translation="MFIIKSMLYRLMQMIVVLFVISTLTFILMKLSPGNPVDKILHLD
                     VAQVSTEQINATKDKLGLNDSLLVQWWHWMNHLLHFNLGKSFESKEPVTQILFNYAPI
                     TLLISFSTLVVSLCISIPLGIIAAKRFHKWTDKVIRVISTLSISLPAFFIGIILLFIV
                     TNLMNIDSVILSQFILPVITLSLGMCAYIIRLVRSNLLMLLQSNIVQASRLRGMNERY
                     ILIHDLLKPTILPIIPLLGISLGSLIGGTVVIENLFDIPGIGYLLMDSIKSRDYPVIQ
                     GCVLFIGFFVVIINTIADLLTLLLDPKQRLQLGNPKIKTNTPLISESSDRHA"
BASE COUNT          498 a          201 c          239 g          537 t
ORIGIN      
        1 ttatgagttt attaattagt tttctattat agtattttac tagaaattgg cgtaaagaaa
       61 gaaaagcgcg taaattagaa aagcaaattg aaaaatacgg ctatgagggc gctgaacttc
      121 gccgtaaaga taaaaaataa tattcgacaa ctatatgcac aaaatcatcg acttttaagt
      181 tacactgcag taacaattat ttcgaaagag atggaataca gtgctatagt tgtttttgtt
      241 ttgacttttt tatattttac atggttgact tgattcaaaa tattatattt tataatgatt
      301 ttgttaaaaa attaaatata cttcaatttc tttatggata atactataat gaacgttagt
      361 tcttaatatg taagttgcat atacatgcgc cattctcatg taaaaagaaa gtgttagtaa
      421 cttacacaag gagggggact attatgttca taataaagtc tatgttgtat agactgatgc
      481 aaatgatagt tgttttattt gttatttcta cacttacatt cattttaatg aaattatcac
      541 caggcaatcc tgttgataaa atattacatc ttgatgtagc acaagtgtcg acggaacaaa
      601 taaatgcaac caaagataaa ttgggattaa atgattcttt attggtacag tggtggcatt
      661 ggatgaatca tttattacat tttaatttag gaaaaagttt tgaatcaaaa gaaccggtaa
      721 cacagatatt attcaactat gcacccataa cattactcat atcattttca acattagtag
      781 tgtcgttatg catatctata ccgctcggca ttatagcagc caaacgattt cataagtgga
      841 cggataaagt gattagagtg atctcaacac tatcgattag tttaccagcg ttctttatcg
      901 gtattatttt attatttatt gtcacaaatt taatgaatat agatagtgtt atactaagtc
      961 agtttatatt acctgtaatc acgctatctt taggtatgtg tgcatacatc attcgtttag
     1021 tgcgttctaa tttattgatg ttattgcaaa gtaatatcgt acaagcatca agattacgcg
     1081 gtatgaatga acgttatatt ttaattcatg atttactaaa accaacaatt ttgccgatta
     1141 tcccattact agggatttca cttggcagtc taataggtgg tactgtagtg attgaaaatt
     1201 tatttgatat acctggtatt ggttatctat taatggatag tattaaatct cgagattatc
     1261 ctgttattca aggatgcgtg ttatttattg gcttcttcgt tgttattatc aatacgattg
     1321 ctgatttatt aacgttatta cttgatccga agcagcgttt acaattagga aatccaaaaa
     1381 tcaaaaccaa tacaccattg atatcagaaa gtagtgaccg tcatgcataa aatattttca
     1441 aagaataacc tgatattttt tgtattcgtt gcatt
//
LOCUS       DALPQQ010000238         1433 bp    DNA     linear   BCT 22-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus strain K18-6-464
            SAMD00233528-rid16434743.denovo.245, whole genome shotgun sequence.
ACCESSION   DALPQQ010000238 DALPQQ010000000
VERSION     DALPQQ010000238.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMD00233528
            Sequence Read Archive: DRR236061
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 1433)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1433)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001543423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001543423.1
            Genome Coverage       :: 77x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/22/2022 17:09:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,811
            CDSs (total)                      :: 2,743
            Genes (coding)                    :: 2,689
            CDSs (with protein)               :: 2,689
            Genes (RNA)                       :: 68
            rRNAs                             :: 2, 4, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 4, 2 (16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 54
            CDSs (without protein)            :: 54
            Pseudo Genes (ambiguous residues) :: 0 of 54
            Pseudo Genes (frameshifted)       :: 27 of 54
            Pseudo Genes (incomplete)         :: 27 of 54
            Pseudo Genes (internal stop)      :: 10 of 54
            Pseudo Genes (multiple problems)  :: 10 of 54
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1433
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMD00233528-rid16434743.denovo.245"
                     /strain="K18-6-464"
                     /db_xref="taxon:1280"
                     /geo_loc_name="Japan: Niigata"
     gene            complement(236..562)
                     /locus_tag="O7798_002657"
     CDS             complement(236..562)
                     /locus_tag="O7798_002657"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501029.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PH domain-containing protein"
                     /protein_id="HDC2864841.1"
                     /translation="MILDNVNPNDLFPTEKKGPSVLGIIEYQVQGENEFEGAFIATNE
                     RLIMNVDMNGQFYYRSISYNEIEKIDYDGQTIMFKFNIGNVPMHDIKSANVEMFVEYV
                     KQHMIV"
     gene            complement(626..1369)
                     /locus_tag="O7798_002658"
     CDS             complement(626..1369)
                     /locus_tag="O7798_002658"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501030.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SarA family transcriptional regulator"
                     /protein_id="HDC2864842.1"
                     /translation="MSKFKVKRLTAHILMLKVINDMLKYSFHLTLTQVKLLNLLVKYD
                     NSDSNSASIDSLLKMKEIQSKMALLQMLSYLNNHQWLLKGRDQRDQRKLTISINKMHI
                     DKIEYMNNELSDYIERYFGQYTFDFSCDYVSYLLSSQELLRNLKCYLNMCQLSLEELY
                     VLGILNLHKGQLTVKELQGEFHHPIFAVSLILKCLILKGLVKKERCELDERRVIVTIK
                     REKFSKVTMLIQACYNYLEKGIQVKLNNK"
BASE COUNT          501 a          246 c          143 g          543 t
ORIGIN      
        1 caaattgaaa attattagtc tgaatatttt gtatcttaac tgatatgtaa acttttaaaa
       61 ttttaatcta tatcaacgtg tttgatttga tattttttat attaattgga tggcttgctc
      121 acaaaattta taaaatataa aaaaagaaga gctttaaatc ataacgcatg ccatttatct
      181 ttaaatgcaa tgagttatca ttcaaactct tcttatcaac ctacatacat tgacattata
      241 ctatcatatg ttgttttaca tattcaacaa acatttcaac gttagcactt ttaatatcat
      301 gcattgggac attaccaata ttaaatttga acattatagt ttgaccatca taatctatct
      361 tctctatttc attataacta atacttctat aataaaattg gccattcata tctacattca
      421 taattaatct ttcatttgtt gctataaatg ccccttcaaa ttcattctca ccttgaactt
      481 gatactcaat tattcctagc actgacggac cctttttttc agttggaaat aaatcatttg
      541 gattcacatt atctaaaatc ataatatccc tcccacttaa aactataaac tattcttcat
      601 aggtatatga aatacaagtg attaactatt tattattaag cttaacttgt attccctttt
      661 caagataatt ataacatgct tgaataagca tagtgacttt agaaaacttt tctcgcttga
      721 ttgttacaat aacacgcctt tcatctaatt cacatctctc ttttttaact aatcccttca
      781 aaattaaaca ctttaaaatc aggctaaccg caaatatcgg gtgatggaat tcaccctgta
      841 attctttaac cgtcaattga cctttatgca gatttaatat tcctaaaacg tataactctt
      901 ctaatgataa ttgacacata tttaaataac actttagatt ccgcaataat tcttgtgacg
      961 acaataaata cgatacatag tcacaactaa aatcaaatgt atattgacca aaataacgtt
     1021 caatatagtc actaagctca ttattcatat attctatttt atctatatgc attttattaa
     1081 tcgaaatagt caatttacgt tgatcccttt gatctcttcc tttcaatagc cattgatgat
     1141 tgtttaaata acttaacatt tgaagaaggg ccatcttaga ttggatttct ttcattttta
     1201 ataaactatc tattgaagcg ctattggaat cagaattatc atatttaact aatagattta
     1261 atagtttcac ttgagtcaaa gtgagatgaa atgaatattt caacatatca ttaatgactt
     1321 tcaacattag tatgtgtgca gttaaacgct taactttaaa tttagacatc tttaaaacct
     1381 ctcttaaacc atgcctatat ctcaagatga tatttcaaat gaacaatact att
//
LOCUS       DALPQQ010000239         1430 bp    DNA     linear   BCT 22-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus strain K18-6-464
            SAMD00233528-rid16434743.denovo.246, whole genome shotgun sequence.
ACCESSION   DALPQQ010000239 DALPQQ010000000
VERSION     DALPQQ010000239.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMD00233528
            Sequence Read Archive: DRR236061
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 1430)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1430)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001543423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001543423.1
            Genome Coverage       :: 77x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/22/2022 17:09:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,811
            CDSs (total)                      :: 2,743
            Genes (coding)                    :: 2,689
            CDSs (with protein)               :: 2,689
            Genes (RNA)                       :: 68
            rRNAs                             :: 2, 4, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 4, 2 (16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 54
            CDSs (without protein)            :: 54
            Pseudo Genes (ambiguous residues) :: 0 of 54
            Pseudo Genes (frameshifted)       :: 27 of 54
            Pseudo Genes (incomplete)         :: 27 of 54
            Pseudo Genes (internal stop)      :: 10 of 54
            Pseudo Genes (multiple problems)  :: 10 of 54
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1430
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMD00233528-rid16434743.denovo.246"
                     /strain="K18-6-464"
                     /db_xref="taxon:1280"
                     /geo_loc_name="Japan: Niigata"
     gene            108..572
                     /locus_tag="O7798_002659"
     CDS             108..572
                     /locus_tag="O7798_002659"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500333.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GAF domain-containing protein"
                     /protein_id="HDC2864843.1"
                     /translation="MTTINPTNYTLLKKQAASLIEDEHHMIAILSNMSALLNDNLDQI
                     NWVGFYLLEQNELILGPFQGHPACVHIPIGKGVCGTAVSERRTQIVADVHQFEGHIAC
                     DANSKSEIVVPIFKDDKIIGVLDIDAPITDRFDDNDKEHLEAIVKIIEKQLA"
     gene            816..1418
                     /gene="rpsD"
                     /locus_tag="O7798_002660"
     CDS             816..1418
                     /gene="rpsD"
                     /locus_tag="O7798_002660"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019165370.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S4"
                     /protein_id="HDC2864844.1"
                     /translation="MARFRGSNWKKSRRLGISLSGTGKELEKRPYAPGQHGPNQRKKL
                     SEYGLQLREKQKLRYLYGMTERQFRNTFDIAGKKFGVHGENFMILLASRLDAVVYSLG
                     LARTRRQARQLVNHGHILVDGKRVDIPSYSVKPGQTISVREKSQKLNIIVESVEINNF
                     VPEYLNFDADSLTGTFVRLPERSELPAEINEQLIVEYYSR"
BASE COUNT          503 a          240 c          245 g          442 t
ORIGIN      
        1 ttataacgta attttgctta aggataaatt ataaaatgaa tttattgcca taatattttc
       61 gaaattctat actattataa aatctatgaa aataagaggt tttaaatatg acaacaatta
      121 acccaacaaa ctacacatta ttaaagaaac aagcagcaag ccttattgaa gatgaacatc
      181 acatgattgc tattttaagt aacatgtctg ccttattaaa tgataatcta gatcaaatta
      241 attgggttgg cttttactta ttggaacaaa atgaacttat acttggacct ttccaaggac
      301 accccgcttg tgtccacatt ccaattggaa aaggtgtatg tggtacagcc gtttcagaac
      361 gtcgtacaca aattgtagct gatgttcatc aattcgaagg acatatcgct tgtgatgcta
      421 atagtaagtc tgagattgtc gttccaattt tcaaagatga taaaattatc ggcgtcttag
      481 atatcgatgc ccctataacg gatcgatttg atgacaatga caaagaacat cttgaagcaa
      541 ttgttaaaat tattgaaaag caactcgcat aaaaggacat cagcattttc aataaagtgt
      601 tgacagttag caggaaaatg ttacaataat ctttgtgtga attaacgaaa gtagcagttg
      661 tatattattg agcgctatgt tgttcccaat gcggacgtgt cacgtaactg tcgctataag
      721 gtgaagacac ataaaacaat atatcttagt aagcatgcaa cactcttttt tgtttattca
      781 taacaacaaa aaagaattaa aggaggagtc ttattatggc tcgattcaga ggttcaaact
      841 ggaaaaaatc tcgtcgttta ggtatctctt taagcggtac tggtaaagaa ttagaaaaac
      901 gtccttacgc accaggacaa catggtccaa accaacgtaa aaaattatca gaatatggtt
      961 tacaattacg tgaaaaacaa aaattacgtt acttatatgg aatgactgaa agacaattcc
     1021 gtaacacatt tgacatcgct ggtaaaaaat tcggtgtaca cggtgaaaac ttcatgatct
     1081 tattagcaag tcgtttagac gctgttgttt attcattagg tttagctcgt actcgtcgtc
     1141 aagcacgtca attagttaac cacggtcata tcttagtaga tggtaaacgt gttgatattc
     1201 catcttattc tgttaaacct ggtcaaacaa tttcagttcg tgaaaaatct caaaaattaa
     1261 acatcatcgt tgaatcagtt gaaatcaaca atttcgtacc tgagtactta aactttgatg
     1321 ctgacagctt aactggtact ttcgtacgtt taccagaacg tagcgaatta cctgctgaaa
     1381 ttaacgaaca attaatcgtt gagtactact caagataata cgttcaatac
//
LOCUS       DALPQQ010000240         1420 bp    DNA     linear   BCT 22-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus strain K18-6-464
            SAMD00233528-rid16434743.denovo.247, whole genome shotgun sequence.
ACCESSION   DALPQQ010000240 DALPQQ010000000
VERSION     DALPQQ010000240.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMD00233528
            Sequence Read Archive: DRR236061
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 1420)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1420)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001543423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001543423.1
            Genome Coverage       :: 77x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/22/2022 17:09:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,811
            CDSs (total)                      :: 2,743
            Genes (coding)                    :: 2,689
            CDSs (with protein)               :: 2,689
            Genes (RNA)                       :: 68
            rRNAs                             :: 2, 4, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 4, 2 (16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 54
            CDSs (without protein)            :: 54
            Pseudo Genes (ambiguous residues) :: 0 of 54
            Pseudo Genes (frameshifted)       :: 27 of 54
            Pseudo Genes (incomplete)         :: 27 of 54
            Pseudo Genes (internal stop)      :: 10 of 54
            Pseudo Genes (multiple problems)  :: 10 of 54
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1420
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMD00233528-rid16434743.denovo.247"
                     /strain="K18-6-464"
                     /db_xref="taxon:1280"
                     /geo_loc_name="Japan: Niigata"
     gene            <1..1396
                     /locus_tag="O7798_002661"
     CDS             <1..1396
                     /locus_tag="O7798_002661"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499939.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDC2864845.1"
                     /translation="AFLSQDFFDIPSIHSDLDDILVNMFLYLPNFFQNQNSEDNMYLA
                     QRIMYQVDDILKEDMLNEYYYLPKTLYNTLASPEFDDLKRTDASQVDGQDDTSEDDDN
                     ESEKADSKSADSESKGGAYLEMELHEGQNSETLGNDEAREGDATDDMTDMMTKKGKGS
                     NDTLNREEGDAVGQSQAFQLDGVNKNVEIKWQIPEIEPQYVLEYQESKQDVQYEIKDL
                     IQIIKKTIEREQRDARFNLTKGRLQKDLINWFIDDQYKLFYKKQDLSKSFDATFTLLI
                     DASASMHDKMAETKKGVVLFHETLKALNIKHEILSFSEDAFDSDEHAQPNIINEIINY
                     DYSTFEKDGPRIMALEPQDDNRDGVAIRVASERLMRRNQHQRFLIVFSDGEPSAFNYS
                     QDGIIDTYEAVEMSRKFGIEVFNVFLSQDPITEDVEQTIHNIYGQYAIFVEGVAHLPG
                     HLSPLLKKLLLKSL"
BASE COUNT          539 a          193 c          257 g          431 t
ORIGIN      
        1 tgcattttta agccaagatt tctttgatat accatctata cattcagatt tagatgatat
       61 tttagtaaat atgttcttat atttacctaa ttttttccaa aatcaaaatt ctgaagataa
      121 tatgtatctg gctcaaagaa ttatgtatca agtagatgat attttaaaag aagatatgct
      181 aaacgaatat tattacttac ctaaaacact atataataca ttagctagtc cagagtttga
      241 tgatttaaag agaactgatg caagtcaagt cgatgggcaa gatgatactt cagaagatga
      301 tgataacgaa agtgaaaaag ctgactctaa atctgcagat agtgagtcaa aaggtggcgc
      361 ctatttagaa atggagcttc acgaaggaca aaatagtgaa acattaggta atgatgaagc
      421 acgtgaaggc gatgctacag atgatatgac tgatatgatg accaaaaagg gcaaaggatc
      481 aaacgatacg ctaaatcgtg aagaaggcga tgctgttggt caaagccaag catttcaact
      541 tgatggtgtg aacaaaaatg tagaaataaa atggcaaatt cctgaaattg agccacaata
      601 tgttttagaa tatcaagaat cgaaacaaga cgtacaatat gaaatcaaag acttaattca
      661 aattataaag aaaacgattg aacgagaaca acgagatgca cgttttaatt taacaaaagg
      721 gcgattacaa aaggatttaa ttaattggtt tatcgacgat caatataaat tgttttacaa
      781 aaaacaagat ttaagtaaat catttgatgc gacatttaca ttgttaattg atgcgtcagc
      841 aagtatgcat gataaaatgg ctgaaacgaa gaaaggtgta gtgttattcc acgagacgtt
      901 aaaagcattg aacattaaac atgaaatttt atcattcagt gaggatgcct ttgattcaga
      961 cgagcatgca caaccaaata tcattaatga aattattaac tatgattact caacctttga
     1021 aaaagatggc ccacgtatta tggcacttga acctcaagat gataatcgtg atggtgttgc
     1081 tattagagtt gcaagtgaac gattaatgcg tcgaaatcaa catcaacgat ttttaatcgt
     1141 attttcagac ggcgaaccgt ctgcatttaa ttatagtcaa gatggtatta ttgatacgta
     1201 tgaagctgta gaaatgtcac gtaaatttgg tattgaagta tttaatgtat ttttgagtca
     1261 agatccaata actgaagatg ttgaacaaac aattcataat atttatggtc aatatgctat
     1321 tttcgttgaa ggtgttgcgc atttacctgg acatctctct ccattattaa aaaaattact
     1381 acttaaatct ttataaataa atttaaaata tgagtttata
//
LOCUS       DALPQQ010000241         1413 bp    DNA     linear   BCT 22-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus strain K18-6-464
            SAMD00233528-rid16434743.denovo.248, whole genome shotgun sequence.
ACCESSION   DALPQQ010000241 DALPQQ010000000
VERSION     DALPQQ010000241.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMD00233528
            Sequence Read Archive: DRR236061
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 1413)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1413)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001543423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001543423.1
            Genome Coverage       :: 77x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/22/2022 17:09:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,811
            CDSs (total)                      :: 2,743
            Genes (coding)                    :: 2,689
            CDSs (with protein)               :: 2,689
            Genes (RNA)                       :: 68
            rRNAs                             :: 2, 4, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 4, 2 (16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 54
            CDSs (without protein)            :: 54
            Pseudo Genes (ambiguous residues) :: 0 of 54
            Pseudo Genes (frameshifted)       :: 27 of 54
            Pseudo Genes (incomplete)         :: 27 of 54
            Pseudo Genes (internal stop)      :: 10 of 54
            Pseudo Genes (multiple problems)  :: 10 of 54
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1413
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMD00233528-rid16434743.denovo.248"
                     /strain="K18-6-464"
                     /db_xref="taxon:1280"
                     /geo_loc_name="Japan: Niigata"
     gene            <1..573
                     /locus_tag="O7798_002662"
     CDS             <1..573
                     /locus_tag="O7798_002662"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000343527.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage resistance protein"
                     /protein_id="HDC2864846.1"
                     /translation="GIGRNAFTFKNNAVLILDTNESVDTGEITANTTRTVKISLKDRP
                     INETDEERYQIFKPYWDYIQPNGNTSVNASVSFLITSLEYLKENGREFKFKDVMLKYY
                     FNEDELTETQITMIRLLSKQGFILAGDETLQRLIEQDYSSLRYKNAKEDMRKIGISIN
                     NQKWIDGVNTKVHQVGNKELFNMALELIND"
     gene            744..>1413
                     /locus_tag="O7798_002663"
     CDS             744..>1413
                     /locus_tag="O7798_002663"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000148374.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional DNA primase/polymerase"
                     /protein_id="HDC2864847.1"
                     /translation="MTGYHVAKKLLKKNIEVIPLNNHKKPTVSFADIDITDEFVEYHS
                     NIYHQTNVLGVLTRGVWCIDIDVDHEDGKNGFDSLKQIPYYEELVTNAQNTLVQTTAS
                     GGKHIIFKKHDNIEYGQKIGYLPSVDIKAHPNNYFVLAGSQTAKGIYTHNGVNVTEYQ
                     GEFEKRIFSKAGNYKQQVLEPYSIRRALPNYSFSHVRVGKGGEGKRAYQRIIDGQSEY
                     RNNDL"
BASE COUNT          542 a          189 c          262 g          420 t
ORIGIN      
        1 ggcattggaa gaaacgcatt tacatttaaa aataacgccg tattaatact agatacaaat
       61 gaaagtgtcg atactggtga aattacagcc aatacaacgc gaacagttaa aatatcgcta
      121 aaggatagac ccataaatga aactgatgaa gaacgttatc agatttttaa gccttattgg
      181 gattatatac aacctaatgg caacacttca gttaatgcgt ctgtgtcatt cttaataacg
      241 agtttggaat atttaaaaga aaatgggcga gaatttaaat ttaaagatgt aatgctcaag
      301 tattatttta atgaagatga attgactgaa actcaaatta ctatgatcag attgttatca
      361 aaacagggct ttatattagc aggcgatgaa actttacaac gcttgataga acaagattac
      421 tcaagtttac gttacaagaa cgctaaagaa gatatgagaa agattggtat tagtataaat
      481 aatcagaagt ggattgatgg tgttaataca aaggtgcatc aagtcgggaa caaagaactt
      541 tttaatatgg ctttagaatt aattaatgat tagggttaga aataactctt gctaaccttt
      601 gttataacct atgaatcgtt gtaataacag tcactaactc ttatagccta agttttattt
      661 agtaatctat aattatttaa atttaataaa gggttatagg taaaacaatg gctataaggg
      721 ttagttttaa aaggaggagt tcaatgactg gttatcatgt agcaaaaaaa ttattaaaaa
      781 agaatattga agtgatacca cttaataatc acaaaaagcc aacagtttca tttgctgata
      841 tagatattac tgatgaattc gttgaatatc attctaatat ttatcatcaa accaatgtat
      901 tgggcgtatt aacacgaggt gtatggtgta tcgacattga tgtagatcat gaagatggta
      961 agaatggttt cgatagtttg aaacaaatac catattacga agaacttgtt accaatgcac
     1021 aaaatacatt agtacagaca acggcaagtg gtgggaaaca tatcatattc aaaaagcatg
     1081 acaatatcga atacggacag aagataggtt atttaccatc tgttgatatc aaagcacatc
     1141 ccaataatta ttttgtgctt gcaggtagtc aaacagctaa aggtatatac actcataacg
     1201 gtgtcaatgt aactgagtat caaggagagt ttgagaaacg aatattttct aaagctggta
     1261 attacaaaca acaagtatta gagccatatt ccattcgacg agcactacct aattatagtt
     1321 ttagtcacgt aagagttggc aaaggtggag aaggaaaacg tgcatatcaa cgcattatag
     1381 acggtcaaag tgaatatagg aacaatgatt tat
//
LOCUS       DALPQQ010000242         1409 bp    DNA     linear   BCT 22-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus strain K18-6-464
            SAMD00233528-rid16434743.denovo.249, whole genome shotgun sequence.
ACCESSION   DALPQQ010000242 DALPQQ010000000
VERSION     DALPQQ010000242.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMD00233528
            Sequence Read Archive: DRR236061
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 1409)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1409)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001543423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001543423.1
            Genome Coverage       :: 77x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/22/2022 17:09:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,811
            CDSs (total)                      :: 2,743
            Genes (coding)                    :: 2,689
            CDSs (with protein)               :: 2,689
            Genes (RNA)                       :: 68
            rRNAs                             :: 2, 4, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 4, 2 (16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 54
            CDSs (without protein)            :: 54
            Pseudo Genes (ambiguous residues) :: 0 of 54
            Pseudo Genes (frameshifted)       :: 27 of 54
            Pseudo Genes (incomplete)         :: 27 of 54
            Pseudo Genes (internal stop)      :: 10 of 54
            Pseudo Genes (multiple problems)  :: 10 of 54
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1409
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMD00233528-rid16434743.denovo.249"
                     /strain="K18-6-464"
                     /db_xref="taxon:1280"
                     /geo_loc_name="Japan: Niigata"
     gene            complement(<1..580)
                     /locus_tag="O7798_002664"
     CDS             complement(<1..580)
                     /locus_tag="O7798_002664"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002485872.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HDC2864848.1"
                     /translation="MKIVEVKSKNGINFMILDGNNEPIVDAVRYLKYLDSVKKSLNTK
                     KTYAYALKNFFVYLESKKICYKEVSFDNFVDFIRWMKTPFEYENVLSYHRKGKSISPK
                     TINLTMTVVSNFYDYLYRSKKLDVNFYDFMHMESKYSKKYKSFMHHINKDYRTLKNIL
                     KVKEPKKKIEVLTNAEVKKLLEEANNIRDKFLI"
     gene            765..1070
                     /locus_tag="O7798_002665"
                     /pseudo
     CDS             765..1070
                     /locus_tag="O7798_002665"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500634.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="YolD-like family protein"
     gene            complement(1088..1296)
                     /locus_tag="O7798_002666"
                     /pseudo
     CDS             complement(1088..1296)
                     /locus_tag="O7798_002666"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000277741.1"
                     /note="frameshifted; incomplete; partial in the middle of
                     a contig; missing C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
BASE COUNT          473 a          217 c          168 g          551 t
ORIGIN      
        1 gtattaagaa tttatctcta atattattag cttcctctaa taatttctta acctccgcat
       61 tagttaacac ttctattttt ttctttggtt ctttaacttt caaaatattt ttcaacgttc
      121 tatagtcctt atttatatga tgcatgaaac ttttatattt tttagagtat ttactttcca
      181 tatgcataaa atcatagaaa ttaacatcta attttttgct cctatagaga taatcataaa
      241 aattagatac tacagtcata gtcagattaa ttgtcttagg actaatgctt tttccttttc
      301 ggtgataaga gaggacattc tcatattcaa aaggtgtttt catccatctt ataaaatcaa
      361 caaagttatc aaaactaact tctttatagc atatcttttt actttctaag taaacaaaaa
      421 aattttttag tgcataggca taggttttct tggtatttaa acttttctta acactatcca
      481 gatacttcaa atatcttact gcatctacta taggttcatt attaccatct aaaatcataa
      541 aattgatacc attcttagat tttacttcta ctattttcat aataatctca tttctaattt
      601 taatagtata agtatacact attcaaactc tttttacatc atacatatta aacttattac
      661 acgtaataaa aaaaagacta tttaatattt ttactttgtt cattttttct taaaatatga
      721 ttcattttaa acaaaatagt ctatattctt caacatatat ataacctttt gcaacattac
      781 ccgaacaatt cgaaacgatt caacaataca ttatcgacca aaacaaaatt acacgtcctg
      841 tattatcaga tgatcaattg gctgagctaa acattcggct acacgaggcg ctacaatatg
      901 cccaacctgt agaagttaaa ttttataata atggctttgt agattcagta cgcttaacca
      961 tttatcgtat tgatgctatt aattatgaaa ttgatggtta tgtttacaat cagcaacaac
     1021 gtcaaaaaat ttctatcttt gatatcttag atattgtctt gttaccttaa tgctttgaac
     1081 ataattaaac agattgagta tatgcatata agatgatttt taacatcatt tttggatgat
     1141 aggatgttgc gccacgatga tgtctgaatt catcgaattc gctatcaggt attgtttcaa
     1201 caatttcatt aacatatcgt gaaatatcat tttgagggat tctaacagaa gtttctattg
     1261 gtagtgtagt tggggcatgt tataattttt atacataagg cacctcgtta atttagttta
     1321 gtggtattta ttaaattata agaagggacc caacacagaa aattcatttt attgaatttt
     1381 acatttatgt gcaagttggg caaagtgtc
//
LOCUS       DALPQQ010000243         1370 bp    DNA     linear   BCT 22-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus strain K18-6-464
            SAMD00233528-rid16434743.denovo.250, whole genome shotgun sequence.
ACCESSION   DALPQQ010000243 DALPQQ010000000
VERSION     DALPQQ010000243.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMD00233528
            Sequence Read Archive: DRR236061
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 1370)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1370)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001543423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001543423.1
            Genome Coverage       :: 77x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/22/2022 17:09:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,811
            CDSs (total)                      :: 2,743
            Genes (coding)                    :: 2,689
            CDSs (with protein)               :: 2,689
            Genes (RNA)                       :: 68
            rRNAs                             :: 2, 4, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 4, 2 (16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 54
            CDSs (without protein)            :: 54
            Pseudo Genes (ambiguous residues) :: 0 of 54
            Pseudo Genes (frameshifted)       :: 27 of 54
            Pseudo Genes (incomplete)         :: 27 of 54
            Pseudo Genes (internal stop)      :: 10 of 54
            Pseudo Genes (multiple problems)  :: 10 of 54
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1370
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMD00233528-rid16434743.denovo.250"
                     /strain="K18-6-464"
                     /db_xref="taxon:1280"
                     /geo_loc_name="Japan: Niigata"
     gene            complement(<1..137)
                     /locus_tag="O7798_002667"
     CDS             complement(<1..137)
                     /locus_tag="O7798_002667"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501126.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDC2864849.1"
                     /translation="MTCQLKIHHTLSTIPSRNINNIMVLFSLTSKLNITINGETKDVS
                     N"
BASE COUNT          569 a          211 c          163 g          427 t
ORIGIN      
        1 taattactta cgtctttggt ttcaccatta atcgtaatat tgagtttact tgtaagtgaa
       61 aatagcacca taatattatt aatattacga cttggtattg tcgataatgt atgatgtatt
      121 ttaagttggc atgtcatatt tctctctcct gcctaatata tattgaaatc tatcatttaa
      181 atgtaaaaca tggaaatttt taaaatcatg gatagtatac ctattatagt tgaatatttt
      241 tgaaaaggta atagtgaaaa ataaaagaaa ttaatgaaaa ctcctaggaa aacgcttgtt
      301 tttatgcatt gcgcacaata taaaagtaaa attagaaaga tagtaagcaa aatttggaaa
      361 ttttcgatag agtctaatta aattatttgg tgcataatta atatagattt caaacctatg
      421 tatttcaaaa aacaatacat agccattttg aactaacttg ctaatctttt attgatattg
      481 aactatgtta taaaaaaagc aaattgacca aaatggaagt ttgaatcaaa aaacattaaa
      541 tgtacccatg acttaaattt tatcgccatt atttaagttt ggacatacac ttttgtcatc
      601 aaacgctgaa aattagtacg attgaaatca cttcttgtta taaaaattct tagtagccct
      661 gttacaaaat attcgctaca aattattcaa atcaacaaca ataaccatca actaagaaat
      721 tttaaacaat ctactaaaaa ataaagcgtt taaaagttct gtttagaaaa catcaagata
      781 agtataaaca tctagaaaag tgaacatcta agaaaatcca tctagttatt gccgtaacaa
      841 ttagaataat catttgaaaa agtgcattag acaacgaaat tcaccatcaa gataatgaag
      901 caacaagaaa cagcacacat caatgaatta acaccttaga ttcatcatga gaaaatgcat
      961 ggcacaacta gatttaccat caagataatt cttaagcagc gaagaattaa catctagaaa
     1021 tgcataaaca tcttagattt tacatcaaga gatgcgataa ctataaacaa ctagaaacgt
     1081 caccaagata gtgcaacaac aaagaatcag catcttgaaa tcgcactaac atctaagaat
     1141 caacatcaag tattatatta acatcataga taacttcatc aagacaggca tccacatcta
     1201 agaaactcat ctagaatagc taacacctaa catcaaagaa tattcatcaa gaacagtatc
     1261 taacagaact ttttgactat atatgaatta attatgttac tagctaaatc atctattatt
     1321 aactttcaca ctcaatttct acatctaata tcaatttatt aacaatagaa
//
LOCUS       DALPQQ010000244         1365 bp    DNA     linear   BCT 22-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus strain K18-6-464
            SAMD00233528-rid16434743.denovo.251, whole genome shotgun sequence.
ACCESSION   DALPQQ010000244 DALPQQ010000000
VERSION     DALPQQ010000244.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMD00233528
            Sequence Read Archive: DRR236061
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 1365)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1365)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001543423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001543423.1
            Genome Coverage       :: 77x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/22/2022 17:09:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,811
            CDSs (total)                      :: 2,743
            Genes (coding)                    :: 2,689
            CDSs (with protein)               :: 2,689
            Genes (RNA)                       :: 68
            rRNAs                             :: 2, 4, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 4, 2 (16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 54
            CDSs (without protein)            :: 54
            Pseudo Genes (ambiguous residues) :: 0 of 54
            Pseudo Genes (frameshifted)       :: 27 of 54
            Pseudo Genes (incomplete)         :: 27 of 54
            Pseudo Genes (internal stop)      :: 10 of 54
            Pseudo Genes (multiple problems)  :: 10 of 54
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1365
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMD00233528-rid16434743.denovo.251"
                     /strain="K18-6-464"
                     /db_xref="taxon:1280"
                     /geo_loc_name="Japan: Niigata"
     gene            complement(51..224)
                     /locus_tag="O7798_002668"
     CDS             complement(51..224)
                     /locus_tag="O7798_002668"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500635.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDC2864850.1"
                     /translation="MWNFIKCVFKFVFSLVAITTLVAGVGVVAFAYIFKKDFEDIERK
                     TKEIISDIESKNN"
     gene            675..>1365
                     /locus_tag="O7798_002669"
     CDS             675..>1365
                     /locus_tag="O7798_002669"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500636.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="linear amide C-N hydrolase"
                     /protein_id="HDC2864851.1"
                     /translation="MQQVTSDIMTFRGSHFELGVKTGKWLQQTPLLKNREKEWKKRVP
                     RFDIDVNETYQIFQTYAPQIWEELMGLQSILKMPTRQIILNFGHYRFTDLKESGCTVF
                     QGKDFMVRNYDYHPATYDGRYLLYQPTDSGLAQIGPVSRVTGRMDGMNESGLTMGYNF
                     MHRKKPANGFVCYMIGRLILENCRNVTEAIQLLKEIPHRSSFSYILMDKSLNHAIVEV
                     TPRSIDVRYDNI"
BASE COUNT          500 a          229 c          192 g          444 t
ORIGIN      
        1 ttatcttact gctgtttttt agggatttat gtcccagcct ctaaatgtta ttagttattt
       61 ttactttcaa tatcagaaat aatttcttta gtttttcttt caatatcttc aaaatctttt
      121 ttaaagatat aagcaaatgc tactacacca acaccagcaa ctaatgttgt aatagcaact
      181 aagctaaata cgaatttaaa cacacattta ataaaattcc acatctcaat ttcacctctg
      241 ttaaattaaa tacctatcta catttcatta tactatcata tatagaataa tcattaaata
      301 aatacccact ttcacgaaat atattcatca aattatatag tgagcaagct aatgattatt
      361 ttcaaaaatg ccgaggaacc tctgtttcaa cgtgacatga ccttatatgc taatgttaac
      421 aatgactatt atcgtgaatg ctaacttaag attgatattt atgataagat gattttaagt
      481 ttttaactca atatccccac catctataaa aatatgtttt aactgattga taagtcttat
      541 acaccgagaa atcacctcaa acaattttat atttcattta gtaaaatata actttattta
      601 acatgacatt caatatacat acgattacta tttatttaca atatattaca actaaaaaga
      661 aaggggccga tgatatgcaa caagtgacat cagatatcat gacttttaga ggttcacatt
      721 tcgagttagg tgttaaaact ggtaaatggc ttcaacaaac acctcttcta aaaaatcgag
      781 aaaaagaatg gaaaaaacgt gtcccacgtt tcgatataga tgtaaatgaa acttatcaaa
      841 tattccaaac atacgcacct caaatatggg aagaattaat gggactacaa agtatactca
      901 aaatgccaac acgccaaatt attttaaact ttggacatta tcgttttacc gatttaaaag
      961 aaagtggttg cacggtcttt caaggcaaag acttcatggt tagaaattat gattaccacc
     1021 ctgcaactta tgatggtcgc tacttacttt atcaacctac agatagcggt ttagctcaaa
     1081 ttggtcctgt atcaagggta actggaagaa tggatggtat gaatgagtca ggattaacta
     1141 tgggctataa ctttatgcac cggaagaaac cagcaaatgg ttttgtatgt tatatgattg
     1201 gtcgtctaat tcttgaaaat tgccgaaatg taacagaagc aatccaatta ttgaaagaaa
     1261 taccacacag aagctcattt agctacatac tgatggacaa atcattgaac catgcaattg
     1321 ttgaagtgac accgagatca atagatgttc gttatgataa tatat
//
LOCUS       DALPQQ010000245         1354 bp    DNA     linear   BCT 22-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus strain K18-6-464
            SAMD00233528-rid16434743.denovo.252, whole genome shotgun sequence.
ACCESSION   DALPQQ010000245 DALPQQ010000000
VERSION     DALPQQ010000245.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMD00233528
            Sequence Read Archive: DRR236061
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 1354)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1354)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001543423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001543423.1
            Genome Coverage       :: 77x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/22/2022 17:09:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,811
            CDSs (total)                      :: 2,743
            Genes (coding)                    :: 2,689
            CDSs (with protein)               :: 2,689
            Genes (RNA)                       :: 68
            rRNAs                             :: 2, 4, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 4, 2 (16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 54
            CDSs (without protein)            :: 54
            Pseudo Genes (ambiguous residues) :: 0 of 54
            Pseudo Genes (frameshifted)       :: 27 of 54
            Pseudo Genes (incomplete)         :: 27 of 54
            Pseudo Genes (internal stop)      :: 10 of 54
            Pseudo Genes (multiple problems)  :: 10 of 54
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1354
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMD00233528-rid16434743.denovo.252"
                     /strain="K18-6-464"
                     /db_xref="taxon:1280"
                     /geo_loc_name="Japan: Niigata"
     gene            complement(299..>1354)
                     /locus_tag="O7798_002670"
     CDS             complement(299..>1354)
                     /locus_tag="O7798_002670"
                     /inference="COORDINATES: protein
                     motif:HMM:NF012948.1,HMM:NF020018.1,HMM:NF037006.1,
                     HMM:NF038186.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YPDG domain-containing protein"
                     /protein_id="HDC2864852.1"
                     /translation="VTYPDGTTDHIKVPVTVGEEVQANTNDPGYDNVTVDPGETVKVP
                     QTGDNTMPDGTQYEIDKSKVPSGWEVTVDHNTGELTVKPSENAVPGTSIVIPVTVTYP
                     DGSTEEVSTTITVGDVIDIPAPTVNPVDDNDTEVTGTDGTPGNTIVVTFPDGSTSEGN
                     IDEDGNWTVDIPEGVDLDKGDVITVVEKDKDGKVSTPTKVVVGENCDNPSNGDNSGDG
                     AGNDSSDGDNSGDGADKGSSNADNSKDEEGNNSSDSNNSVEGNKGLTDNNATTDSNNT
                     ASVNNTDQTDSNNDVSELNEDNNTSNNTHKQNNSEAKALPETGETDGKQATIFGALFA
                     GLGSLLLFRRRNKNEEK"
BASE COUNT          383 a          266 c          188 g          517 t
ORIGIN      
        1 aaaaacttct tcatataagt atatacagcc atatatactt ataataatag tcacctcaaa
       61 gggtagatat gataaatcta ttttagtgta gcatatactt aaataaacaa ttttgttatt
      121 atatcataaa taattaatat attctacatt ttaattaaga gacatacaaa aaacaataaa
      181 aaatactaac atagaatttt aagtaattta atttctgcta aatttcatcc ttaaaatcat
      241 tattttataa gtaaaaagaa aagctaggca aattgcctag cttcttccat aatacttatt
      301 atttttcttc gtttttatta cgtcttctga ataatagtaa tgatcctaat cctgcaaaca
      361 atgctccaaa gatagtagct tgcttaccat cagtttctcc tgtttcaggt aatgctttag
      421 cttcactatt attttgttta tgagtattat ttgaagtatt attatcttca tttaactctg
      481 aaacgtcatt gtttgaatct gtttgatcag tgttgttaac agacgcagta ttatttgaat
      541 ctgtagtagc gttattatca gttaaacctt tatttccttc aactgaatta ttgctatctg
      601 aagagttatt accttcttca tcttttgaat tatctgcatt tgatgagcct ttatctgctc
      661 cgtctcctga gttgtctcca tctgatgaat cattgcctgc tccatctcct gagttatctc
      721 catttgatgg attatcacaa ttttctccta caacaacttt tgtcggggta gatactttac
      781 catctttatc tttttcaaca acagtaatta catcaccttt atcaaggtct acgccctctg
      841 gaatatcaac agtccaatta ccatcctcat caatgttgcc ttctgaagta ctaccatctg
      901 ggaatgtaac cacaattgtg ttgcctggtg taccatctgt tcccgtaact tcagtatcat
      961 tatcatcaac cgggttaacc gttggcgctg gaatatcaat cacatcacct actgtaatcg
     1021 ttgttgatac ttcttctgta gaaccatctg gatacgttac cgtcactggt ataactatag
     1081 atgttcctgg tactgcattt tccgaaggtt ttacagttaa ttcaccagta ttatggtcaa
     1141 ctgttacttc ccatcctgaa ggaactttcg atttgtcaat ttcatattga gtgccatccg
     1201 gcattgtatt atcaccagtt tgtggcactt tgactgtttc tcctggatct actgttacat
     1261 tatcataacc tggatcatta gtattcgctt gtacttcttc tcctactgtt accggtactt
     1321 taatgtggtc tgttgttcca tctggatacg ttac
//
LOCUS       DALPQQ010000246         1346 bp    DNA     linear   BCT 22-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus strain K18-6-464
            SAMD00233528-rid16434743.denovo.253, whole genome shotgun sequence.
ACCESSION   DALPQQ010000246 DALPQQ010000000
VERSION     DALPQQ010000246.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMD00233528
            Sequence Read Archive: DRR236061
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 1346)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1346)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001543423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001543423.1
            Genome Coverage       :: 77x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/22/2022 17:09:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,811
            CDSs (total)                      :: 2,743
            Genes (coding)                    :: 2,689
            CDSs (with protein)               :: 2,689
            Genes (RNA)                       :: 68
            rRNAs                             :: 2, 4, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 4, 2 (16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 54
            CDSs (without protein)            :: 54
            Pseudo Genes (ambiguous residues) :: 0 of 54
            Pseudo Genes (frameshifted)       :: 27 of 54
            Pseudo Genes (incomplete)         :: 27 of 54
            Pseudo Genes (internal stop)      :: 10 of 54
            Pseudo Genes (multiple problems)  :: 10 of 54
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1346
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMD00233528-rid16434743.denovo.253"
                     /strain="K18-6-464"
                     /db_xref="taxon:1280"
                     /geo_loc_name="Japan: Niigata"
     gene            <1..>1346
                     /locus_tag="O7798_002671"
     CDS             <1..>1346
                     /locus_tag="O7798_002671"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498636.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="TIGR04141 family sporadically distributed
                     protein"
                     /protein_id="HDC2864853.1"
                     /translation="YLDTEEDDNLFSESGHHFDAILFLKEDTTLQNNVYIIPFGQAYH
                     DINNLIDYDFGIDFAERAIKNEDIVNKNVNFFQQNRLKEIVNYRRNSVDYVRPSESYI
                     SVQGHPQNPQIFGKTMTCGTSISLRVPNRKQQFIDKISVIIKEINAIINLPQKISEFP
                     RIVTLKDLNKIEVLDTLLLKKLSNSSTTENISIDISRFLELSNMILLLDDMLDVNIYI
                     NSFKNNTLETFDATDPEVDYITEIGDYLLKYDVNSINDVRIEVIDNLGHSNNMLLKTI
                     LHAEVEMEDGKKYLLQNGKWGYFNREFFDLLNDHLNEIEIRYNTLTPTGLVFKEGEEG
                     YIKEIVGRLPEEYLMLHKKFIKPINKNFIVKGNGIELADLYNIKNKELFTIKRGINTS
                     LSLYSLEQNIIAINALKYPESYNFEELIEAIPDNSENIFNDIQRSTNFSIVWILPI"
BASE COUNT          561 a          153 c          206 g          426 t
ORIGIN      
        1 tatacctaga tactgaagaa gatgacaatt tattttcaga atccggtcat cattttgatg
       61 caatattatt tctcaaagaa gatacaacat tacaaaataa tgtatatatt ataccttttg
      121 gacaagcata tcatgatata aataatttga ttgattatga cttcggaatt gattttgcag
      181 aaagagcaat caaaaatgaa gacatagtta ataaaaatgt taattttttt caacaaaaca
      241 ggcttaaaga gattgttaat tatagaagga atagtgtaga ttacgttaga ccttcagaat
      301 cttatatatc agtccaagga catccacaga atcctcaaat ttttggaaaa acaatgactt
      361 gtggtacaag tatttcattg cgtgtaccga atagaaagca gcaattcata gataaaatta
      421 gtgtgataat caaagaaata aacgctatta ttaatcttcc tcaaaaaatt agtgaatttc
      481 ctagaatagt aactttaaaa gacttgaata aaatagaagt attagatact ttattgctaa
      541 aaaaactatc gaattcttca actacagaaa atatatctat agatatatca agatttttag
      601 aactaagtaa tatgatactc ttgttagatg atatgctcga cgtcaatata tatataaatt
      661 cttttaaaaa taatacatta gagacatttg atgcgactga tcctgaagtt gattacatca
      721 ctgaaatagg agattactta ttaaaatatg acgttaattc tataaatgat gtcagaattg
      781 aagtgataga taatttgggg cattcaaata atatgctact aaaaacgata ctacatgcag
      841 aagttgaaat ggaagatgga aagaaatatt tattacaaaa tgggaaatgg ggttatttta
      901 atagagaatt ttttgacctt ttgaatgatc atttgaatga gatagaaatt aggtataaca
      961 cactaactcc cacaggttta gtatttaaag aaggagaaga aggatatata aaagaaatag
     1021 taggaagatt gccagaagaa tatttaatgt tacataaaaa attcataaaa ccaataaata
     1081 agaattttat agtaaaagga aatggaatag agttggcaga cttatacaat attaaaaaca
     1141 aagagctttt cacgattaaa agaggaatta atacatcttt atctctttat agtctagaac
     1201 agaatataat agcaattaac gccttaaaat atccagaatc atataatttt gaagaattaa
     1261 tagaagctat tcctgataac tcggaaaata tatttaatga tatacaacgg agtacaaatt
     1321 ttagtatagt atggatttta ccgata
//
LOCUS       DALPQQ010000247         1345 bp    DNA     linear   BCT 22-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus strain K18-6-464
            SAMD00233528-rid16434743.denovo.254, whole genome shotgun sequence.
ACCESSION   DALPQQ010000247 DALPQQ010000000
VERSION     DALPQQ010000247.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMD00233528
            Sequence Read Archive: DRR236061
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 1345)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1345)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001543423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001543423.1
            Genome Coverage       :: 77x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/22/2022 17:09:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,811
            CDSs (total)                      :: 2,743
            Genes (coding)                    :: 2,689
            CDSs (with protein)               :: 2,689
            Genes (RNA)                       :: 68
            rRNAs                             :: 2, 4, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 4, 2 (16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 54
            CDSs (without protein)            :: 54
            Pseudo Genes (ambiguous residues) :: 0 of 54
            Pseudo Genes (frameshifted)       :: 27 of 54
            Pseudo Genes (incomplete)         :: 27 of 54
            Pseudo Genes (internal stop)      :: 10 of 54
            Pseudo Genes (multiple problems)  :: 10 of 54
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1345
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMD00233528-rid16434743.denovo.254"
                     /strain="K18-6-464"
                     /db_xref="taxon:1280"
                     /geo_loc_name="Japan: Niigata"
     gene            complement(19..>1345)
                     /gene="brnQ"
                     /locus_tag="O7798_002672"
     CDS             complement(19..>1345)
                     /gene="brnQ"
                     /locus_tag="O7798_002672"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499938.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="branched-chain amino acid transport system II
                     carrier protein"
                     /protein_id="HDC2864854.1"
                     /translation="VIGFTLFAMFFGAGNLIFPPNLGLDSGQFFWPAILAFVLTGIGL
                     PLLGVIVGALDKEGYIGALNKISPKFSILFLIIIYLTIGPLFAIPRTASTSFEMTITP
                     IIHSNSSIALFIFTIIYFIVVLYICLNPSKLIDRIGSLLTPLLLITILAMIIKGYLDF
                     SGNSAGKGNEALYHSNFSSFAEGFTQGYLTMDAIAAIAFSMIVVNAVKLTGITKTNQI
                     FKQTLTAGLIAAVALIFIYISLGYIGNHMPVSDMTLDQLKSKDRNIGTYLLTTMASTG
                     FGSFGKYLLGIIVALACLTTACGLIVAVSEYFHRIVPKVSYKAFVLVFILMSFIIANQ
                     GLNAVISMSIPVLSIVYPVAITVVLLILIAKFIPTKRISQQIPVIIVFILSIFSVISK
                     LGWLKINFIESLPLRAYSLEWFPVAIIATILGYLVGIFVKQDPIKYQQE"
BASE COUNT          494 a          225 c          210 g          416 t
ORIGIN      
        1 cctcttttat attattcgtt attcctgttg atatttaatt ggatcttgtt ttacaaatat
       61 gccgactaga tagcctaata tcgttgcaat aattgctact gggaaccact ctaaagaata
      121 cgctcttaga ggcaatgatt ctataaagtt aattttcagc caacctaact tactaataac
      181 actgaaaatc gacaatataa atacgataat aactggaatt tgttgtgaaa tgcgttttgt
      241 cggtatgaat ttggcaatta aaattaataa tacaacagtt attgctactg ggtatacaat
      301 gcttaatacc ggaattgaca ttgagataac agcatttaaa ccttggttag caataataaa
      361 actcattaaa atgaaaacta atacaaatgc tttgtatgat actttaggta cgattctatg
      421 gaaatattca gaaactgcaa caataagccc gcatgctgta gttagacatg ccagcgccac
      481 aatgatgccc aataaatatt ttccgaatga accaaatcct gttgaagcca ttgtcgttaa
      541 taaatatgtc ccaatgtttc gatctttgga tttcaattga tctaacgtca tgtcacttac
      601 tggcatatga ttaccaatat aacctaatga aatatatatg aaaattaaag ctacggctgc
      661 aattaaacca gcagtcaaag tttgtttgaa tatttgattt gttttagtaa tgcctgttag
      721 ttttactgca ttaacaacaa tcattgaaaa agcaattgct gcaatggcat ccattgttaa
      781 atagccttgt gtaaagcctt cagcaaaact tgaaaaatta gaatgatata gtgcttcatt
      841 gccctttcca gcactattac cgctaaagtc taagtatcct ttaataatca tcgctaaaat
      901 agtaatcaat aataatggtg ttaataatga accaatacga tcgattaact tagatggatt
      961 taaacaaata tacaaaacga ctatgaagta gataatcgta aatataaata aagcgatact
     1021 actattgcta tgtataattg gtgtaattgt catttcaaaa gatgtagatg cagttctagg
     1081 tattgcaaaa agtggtccta tagtcaaata aatgatgatt aagaacaata ttgaaaattt
     1141 aggtgaaatt ttatttaatg cgccaatata tccttcttta tcaagtgcac ctacaatcac
     1201 acctaataat ggtaaaccaa tcccagttag aacaaacgct aaaatggcgg gccagaaaaa
     1261 ttgaccacta tccaatccga gattaggagg aaaaattaga ttgcctgcgc caaaaaacat
     1321 agcgaagagc gtaaacccaa tgacc
//
LOCUS       DALPQQ010000248         1307 bp    DNA     linear   BCT 22-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus strain K18-6-464
            SAMD00233528-rid16434743.denovo.256, whole genome shotgun sequence.
ACCESSION   DALPQQ010000248 DALPQQ010000000
VERSION     DALPQQ010000248.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMD00233528
            Sequence Read Archive: DRR236061
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 1307)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1307)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001543423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001543423.1
            Genome Coverage       :: 77x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/22/2022 17:09:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,811
            CDSs (total)                      :: 2,743
            Genes (coding)                    :: 2,689
            CDSs (with protein)               :: 2,689
            Genes (RNA)                       :: 68
            rRNAs                             :: 2, 4, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 4, 2 (16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 54
            CDSs (without protein)            :: 54
            Pseudo Genes (ambiguous residues) :: 0 of 54
            Pseudo Genes (frameshifted)       :: 27 of 54
            Pseudo Genes (incomplete)         :: 27 of 54
            Pseudo Genes (internal stop)      :: 10 of 54
            Pseudo Genes (multiple problems)  :: 10 of 54
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1307
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMD00233528-rid16434743.denovo.256"
                     /strain="K18-6-464"
                     /db_xref="taxon:1280"
                     /geo_loc_name="Japan: Niigata"
     gene            complement(<1..727)
                     /locus_tag="O7798_002673"
     CDS             complement(<1..727)
                     /locus_tag="O7798_002673"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500028.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1672 domain-containing protein"
                     /protein_id="HDC2864855.1"
                     /translation="MFKRTKLILIATLLLSGCSTTNNESNKETKSVPEEMEASKYVGQ
                     GFQPPAEKDVVEFAKKHKDKIAKRGEQFFMDNFGLKVKATNVVGSGKGVEVFVHCDDH
                     DIVFNASIPFDKSIIESDSSLRSEDKGDDMSTLVGTVLSGFEYRTQKEKYDNLYKFFK
                     DNEEKYQYTGFTKEAINKTQNVGYKNEYFYITYSSRSLKEYRKYYEPLIHKNDKEFKE
                     GMEQARKEVNYAANTDTVTTLFST"
     gene            complement(818..>1307)
                     /locus_tag="O7798_002674"
     CDS             complement(818..>1307)
                     /locus_tag="O7798_002674"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001033760.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDC2864856.1"
                     /translation="KIVDVIKYLINTIPKIRKNLRHAIEMLNVKKKEFLSLIPNVTCN
                     YIKTKLEELDNTLGKWEPFLNDLKAVSPILDNHLDDIVKNMKPLIVQMIFEPSHYDDM
                     FILNTQAHARLDQMAQQFEVVCNGLNENEGQAIQTMDQSASLIRSNLIQVKEQLEKLA
                     VY"
BASE COUNT          379 a          225 c          173 g          530 t
ORIGIN      
        1 ttgtactaaa caatgttgtt actgtatctg tattagcagc gtaattcact tcttttctgg
       61 cttgttccat tccttcttta aattctttat catttttatg aatcaatggt tcgtaatact
      121 tacgatattc ttttaagctt cttgacgagt aagtgatata aaaatattca tttttatatc
      181 cgacattttg cgtcttgttt attgcttctt ttgtaaagcc tgtatattgg tatttctctt
      241 cattatcttt gaaaaattta tataaattgt catacttttc tttttgtgtt cgatattcaa
      301 agccactcaa cactgtacca actaaagtac tcatatcatc gcctttgtcc tcacttctta
      361 atgagctatc actctcaatt attgatttat caaatggaat actcgcatta aatacgatat
      421 cgtggtcatc acaatgcacg aatacttcta cgccttttcc actacctaca acattggtag
      481 ctttaacttt tagaccgaaa ttatccataa aaaattgttc gcctcgtttg gcaattttat
      541 ctttatgctt tttcgcaaat tcaaccacat ctttttctgc aggtggttgg aagccttgac
      601 ctacatattt tgaagcttcc atttcttctg gcactgattt tgtttcttta ttagattcgt
      661 tattggtagt tgaacatcct gatagcagta atgttgctat taagattagt ttagttcttt
      721 taaacatagc tcatcaccca tttatgtgtt tgtaaaactt ttatgtttga aaaagctact
      781 tattctcaat gaaaacaagt agcatttaat aaattaatta gtatacagct agtttttcta
      841 attgttcttt aacttgaatt aagtttgacc gtattagaga ggcagattga tccatcgttt
      901 gaattgcttg tccttcattt tcgttcaagc cattacaaac aacttcaaac tgttgtgcca
      961 tttgatcaag acgcgcatga gcttgtgtgt ttaaaataaa catatcgtca taatgtgatg
     1021 gttcaaatat catttgtaca atcaaaggct tcatgttctt aacaatatca tctaaatggt
     1081 tatctaaaat tggtgacact gcttttaaat cattaagaaa aggctcccat ttgcctaaag
     1141 tattatctaa ttcttctaat ttagttttaa tataattaca agttacatta ggaatcaggg
     1201 acaaaaattc tttctttttt acatttaaca tttcaattgc atgtcttaaa ttcttacgta
     1261 ttttgggaat tgtattaatc aaatatttta ttacatcgac aattttc
//
LOCUS       DALPQQ010000249         1285 bp    DNA     linear   BCT 22-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus strain K18-6-464
            SAMD00233528-rid16434743.denovo.257, whole genome shotgun sequence.
ACCESSION   DALPQQ010000249 DALPQQ010000000
VERSION     DALPQQ010000249.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMD00233528
            Sequence Read Archive: DRR236061
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 1285)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1285)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001543423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001543423.1
            Genome Coverage       :: 77x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/22/2022 17:09:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,811
            CDSs (total)                      :: 2,743
            Genes (coding)                    :: 2,689
            CDSs (with protein)               :: 2,689
            Genes (RNA)                       :: 68
            rRNAs                             :: 2, 4, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 4, 2 (16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 54
            CDSs (without protein)            :: 54
            Pseudo Genes (ambiguous residues) :: 0 of 54
            Pseudo Genes (frameshifted)       :: 27 of 54
            Pseudo Genes (incomplete)         :: 27 of 54
            Pseudo Genes (internal stop)      :: 10 of 54
            Pseudo Genes (multiple problems)  :: 10 of 54
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1285
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMD00233528-rid16434743.denovo.257"
                     /strain="K18-6-464"
                     /db_xref="taxon:1280"
                     /geo_loc_name="Japan: Niigata"
     gene            279..680
                     /locus_tag="O7798_002675"
     CDS             279..680
                     /locus_tag="O7798_002675"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500382.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MarR family transcriptional regulator"
                     /protein_id="HDC2864857.1"
                     /translation="MKKVNNDTVFGILQLETLLGDINSIFSEIESEYKMSREEILILL
                     TLWQKGSMTLKEMDRFVEVKPYKRTRTYNNLVELEWIYKERPVDDERTVIIHFNEKLQ
                     QEKVELLNFISDAIASRATAMQNSLNAIIAV"
     gene            868..>1285
                     /gene="tnpA"
                     /locus_tag="O7798_002676"
     CDS             868..>1285
                     /gene="tnpA"
                     /locus_tag="O7798_002676"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002458050.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS200/IS605 family transposase"
                     /protein_id="HDC2864858.1"
                     /translation="MSSDTNSLAHTKWNCKYHIVFAPKYRRQVIYGKIKKDIGIILRQ
                     LCERKGVEIIEAEACKDHIHMLVSIPPKLGVSSFVGYLKGKSSLMIFDRHANLKYRYG
                     NRKFWCKGFYVDTVGRNKKVIENYIRNQLQEDIVADQ"
BASE COUNT          484 a          139 c          236 g          426 t
ORIGIN      
        1 ttgatatatt ttctttgtat ataaattata aaattaatat gtaatagagt gatttgtttt
       61 atgtactatt atcttatttc taaatattaa ctctattgat tattggtttt tatacttatt
      121 taattttatt caactttgac aattgaatag aaagcaagtt tatttacact tgtagtttta
      181 tgcataagtt agcacataca agttttggga ttgttgggat gtttgttaat acttgtatag
      241 tagctaaata tgtgattatt aattgggaga tgtttagcat gaaaaaagta aataacgaca
      301 ctgtatttgg aattttgcaa ttagaaacac ttttgggtga cattaactca attttcagcg
      361 agattgaaag cgaatacaaa atgtctagag aagaaatttt aattttacta actttatggc
      421 aaaaaggttc tatgacgctt aaagaaatgg acagatttgt tgaagttaaa ccgtataagc
      481 gtacgagaac gtataataat ttagttgaat tagaatggat ttacaaagag cgtcctgttg
      541 acgatgaaag aacagttatt attcatttca atgaaaagtt acaacaagag aaagtagagt
      601 tgttgaattt catcagtgat gcgattgcaa gtagagcaac agcaatgcaa aatagtttaa
      661 acgcaattat tgctgtgtaa gtttaatagc ataaaaagag gttttcatta agttgaaaac
      721 ctctttttgt tgttgtaaaa agaaaaccat acgctatgcg tatggttcag aaaaggttct
      781 accattgtca caaaaaatgc atctctacgt gctagaataa atattggtca gccaaccaaa
      841 ataatcaaca cgaggagatg ctatttaatg tcatctgaca caaacagttt agcacataca
      901 aaatggaatt gtaagtatca tattgtcttt gcacctaaat acagaagaca agtgatatat
      961 ggaaaaataa aaaaagatat agggattata ttgcgtcaat tatgtgaaag aaaaggtgta
     1021 gagataattg aagcagaggc atgtaaagat catatccata tgttagttag tataccaccc
     1081 aaacttgggg tatcatcatt tgttggctat ttaaaaggaa aaagtagttt aatgatattt
     1141 gatagacatg ctaacttaaa gtatagatat ggaaatagaa agttttggtg taaaggattt
     1201 tatgtggata cagtaggtag aaataaaaaa gtgattgaaa attatattcg taatcaatta
     1261 caagaggata tcgttgcaga ccaaa
//
LOCUS       DALPQQ010000250         1259 bp    DNA     linear   BCT 22-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus strain K18-6-464
            SAMD00233528-rid16434743.denovo.258, whole genome shotgun sequence.
ACCESSION   DALPQQ010000250 DALPQQ010000000
VERSION     DALPQQ010000250.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMD00233528
            Sequence Read Archive: DRR236061
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 1259)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1259)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001543423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001543423.1
            Genome Coverage       :: 77x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/22/2022 17:09:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,811
            CDSs (total)                      :: 2,743
            Genes (coding)                    :: 2,689
            CDSs (with protein)               :: 2,689
            Genes (RNA)                       :: 68
            rRNAs                             :: 2, 4, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 4, 2 (16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 54
            CDSs (without protein)            :: 54
            Pseudo Genes (ambiguous residues) :: 0 of 54
            Pseudo Genes (frameshifted)       :: 27 of 54
            Pseudo Genes (incomplete)         :: 27 of 54
            Pseudo Genes (internal stop)      :: 10 of 54
            Pseudo Genes (multiple problems)  :: 10 of 54
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1259
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMD00233528-rid16434743.denovo.258"
                     /strain="K18-6-464"
                     /db_xref="taxon:1280"
                     /geo_loc_name="Japan: Niigata"
     gene            123..383
                     /locus_tag="O7798_002677"
     CDS             123..383
                     /locus_tag="O7798_002677"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499379.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDC2864859.1"
                     /translation="MNNILLNAINIVITTTFVIFNILITYNKDLDDLCWLLPGIIICG
                     VILIVSFTIAMITKNWLSEILFFINIVLVLYYIYPIFYSFIG"
     gene            412..600
                     /locus_tag="O7798_002678"
     CDS             412..600
                     /locus_tag="O7798_002678"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499378.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDC2864860.1"
                     /translation="MSLHFAILFWLALIFLVAATFILVLMKKTSKESKKESYLSFTVI
                     LYIFGFAILIYTFIFGVL"
     gene            788..>1259
                     /locus_tag="O7798_002679"
     CDS             788..>1259
                     /locus_tag="O7798_002679"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499377.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDC2864861.1"
                     /translation="MNYIKRTIILLILFVVVSPINSPKTIADNKYSEIQDDKFQLQPG
                     DIIVTKGPVMWGFFGHCSIAIDDKTILQIEGPGDKPTTQSFESFKYNYASGKNDWMKV
                     YRCSYPGAGKKAAEWVKKNYENTNHRYLVTLNLNSKKFTYCTKIIYQAYKFGVSE"
BASE COUNT          427 a          177 c          175 g          480 t
ORIGIN      
        1 ttaataaact ttagcattct gcaaataata ttttaaaaat aactatactt tttatttacc
       61 tattgaaaaa tagtgttatc atatttatta agaagctatt tttatactag taggtgtcag
      121 tcatgaataa cattttgtta aatgctatca atatagttat tactaccact tttgttatct
      181 ttaatatttt aatcacatat aataaagatt tagatgattt atgttggctc ctgcctggta
      241 ttatcatttg tggtgtgata ctcatcgtat cctttaccat tgcaatgata actaaaaact
      301 ggttaagtga aatattattt tttataaata tcgtactcgt tctctattac atttatccta
      361 ttttttatag ttttataggt taataattac ggtatataag gagggtttca catgtcttta
      421 cattttgcaa ttctgttttg gctagcatta attttcttag ttgccgctac gtttatactc
      481 gtattaatga aaaaaactag caaagaatct aaaaaagagt cctatttaag tttcactgtc
      541 attctctata tttttggatt cgctatatta atatacacat ttatatttgg tgtgctataa
      601 atgaaattca ttttatatcc agtctgaaac gtctcaatga tgtttcagac tgttttttat
      661 tcttaataga catttcacac tctcatactt taatatttaa gatatgtttt agtcttacaa
      721 gcttattaaa gattacaatt ctaatttaag actatttaca tatatttctt caacaaggag
      781 cttttaagtg aactatatta aacgaacgat aattttactt atattattcg ttgtcgtatc
      841 cccaataaac tcaccaaaaa caattgcaga taataagtat tcagaaattc aagatgacaa
      901 attccaatta caacctggtg atattattgt tacaaaaggc cctgtcatgt ggggattttt
      961 tggtcattgt agtatcgcga ttgatgataa aacgatttta caaattgagg ggcctggcga
     1021 caaaccaact acacaatcct tcgaatcttt taaatataat tatgcaagtg gcaaaaatga
     1081 ttggatgaaa gtttatcgtt gcagctatcc tggtgcaggt aaaaaagcgg ctgaatgggt
     1141 taagaaaaac tatgagaata caaatcatcg ttatctagtt acattaaatt tgaacagcaa
     1201 aaaatttacg tattgtacta aaattatcta ccaagcttat aaatttggtg taagtgaaa
//
LOCUS       DALPQQ010000251         1254 bp    DNA     linear   BCT 22-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus strain K18-6-464
            SAMD00233528-rid16434743.denovo.259, whole genome shotgun sequence.
ACCESSION   DALPQQ010000251 DALPQQ010000000
VERSION     DALPQQ010000251.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMD00233528
            Sequence Read Archive: DRR236061
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 1254)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1254)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001543423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001543423.1
            Genome Coverage       :: 77x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/22/2022 17:09:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,811
            CDSs (total)                      :: 2,743
            Genes (coding)                    :: 2,689
            CDSs (with protein)               :: 2,689
            Genes (RNA)                       :: 68
            rRNAs                             :: 2, 4, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 4, 2 (16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 54
            CDSs (without protein)            :: 54
            Pseudo Genes (ambiguous residues) :: 0 of 54
            Pseudo Genes (frameshifted)       :: 27 of 54
            Pseudo Genes (incomplete)         :: 27 of 54
            Pseudo Genes (internal stop)      :: 10 of 54
            Pseudo Genes (multiple problems)  :: 10 of 54
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1254
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMD00233528-rid16434743.denovo.259"
                     /strain="K18-6-464"
                     /db_xref="taxon:1280"
                     /geo_loc_name="Japan: Niigata"
     gene            <1..477
                     /locus_tag="O7798_002680"
     CDS             <1..477
                     /locus_tag="O7798_002680"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002485872.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine-type recombinase/integrase"
                     /protein_id="HDC2864862.1"
                     /translation="DIKFDFRKGHQIVLKNRFNDNGTYLKTGERKIFISQSLIDLYDD
                     YVYEIIDELSICSDYLFVKIKGRNVGEAMNYSDIYSLFKRLKHKTSINVHPHLFRHTH
                     ATVFYNETKDIKQVQERLGHSNIQTTINLYVHPTEEDIREDWNKVKPQFQVFNKGE"
     gene            480..>1254
                     /locus_tag="O7798_002681"
     CDS             480..>1254
                     /locus_tag="O7798_002681"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000026849.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HDC2864863.1"
                     /translation="MSIPINLPTNSTMINELCTLQSRTINIKGEVLITEIYDDYFFKN
                     DEWHITAFNKFKQFQDSIKNYRDKRKNVFFRIKSKNLNLEFKYLFLKLIVKEDWSLSN
                     LFNTGAVKLNKIAKFFNEVYPNLNSLLDCDINTLEKHWFNWLTENNIPIKRRSSTIVF
                     GDYEYKSGLASFLKNMYINLIKFIDKREEWEKDKWDIRNLEKYGLSYNKTLTGNYLNF
                     EKIESIKMRELAKKYLKNRLITGDIGFATARFYIRVLTRF"
BASE COUNT          510 a          128 c          196 g          420 t
ORIGIN      
        1 gatattaaat ttgattttag aaaaggccat caaatagttt tgaaaaatag atttaatgat
       61 aatggtactt atttgaaaac tggggaaaga aaaatattta tttcccaatc gttaattgat
      121 ttatacgatg attatgtcta cgaaataatt gacgaacttt caatatgttc tgattatctt
      181 tttgtaaaaa taaaggggag aaatgtagga gaggctatga attatagtga tatatattca
      241 ttatttaaaa ggctaaaaca taaaacatct ataaatgttc atcctcattt atttcgccat
      301 acacatgcaa ctgtttttta taatgaaact aaggatataa aacaagttca agaaagactt
      361 ggtcatagta atatacaaac gactattaat ttatatgttc atcccactga agaagatata
      421 cgtgaagatt ggaataaagt aaagcctcaa tttcaagttt ttaataaagg ggaatgacta
      481 tgtcaatacc aattaattta cctacaaaca gtactatgat taatgaatta tgtacattac
      541 aaagtagaac catcaatata aaaggagagg ttttaataac tgaaatatat gatgattact
      601 tttttaaaaa tgatgagtgg cacattacag cttttaacaa attcaagcaa tttcaagata
      661 gtatcaagaa ctatagagac aaaagaaaaa atgttttctt taggattaaa agtaaaaatt
      721 tgaatttaga atttaaatac ctttttttga aactgatagt taaagaggat tggtccttat
      781 ctaatttatt taatactgga gcagtaaagc ttaataagat tgctaagttc tttaatgaag
      841 tttatccaaa tttaaattct ttacttgatt gtgatataaa tacattagaa aagcactggt
      901 ttaattggct gactgaaaat aatataccaa taaaaagaag atcatcaaca atagtttttg
      961 gtgattatga atacaaaagc gggctggctt cttttttaaa gaatatgtac attaatctaa
     1021 ttaagttcat tgataagcga gaagaatggg aaaaagataa atgggatatt agaaatttag
     1081 aaaaatatgg attgagttat aataaaacac taactggcaa ttatttaaac tttgaaaaaa
     1141 ttgagtcaat taaaatgcga gaattagcaa aaaaatattt aaaaaatcgt ttgataactg
     1201 gtgatatagg atttgctaca gcaaggtttt atataagagt tttaactagg tttt
//
LOCUS       DALPQQ010000252         1252 bp    DNA     linear   BCT 22-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus strain K18-6-464
            SAMD00233528-rid16434743.denovo.260, whole genome shotgun sequence.
ACCESSION   DALPQQ010000252 DALPQQ010000000
VERSION     DALPQQ010000252.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMD00233528
            Sequence Read Archive: DRR236061
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 1252)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1252)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001543423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001543423.1
            Genome Coverage       :: 77x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/22/2022 17:09:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,811
            CDSs (total)                      :: 2,743
            Genes (coding)                    :: 2,689
            CDSs (with protein)               :: 2,689
            Genes (RNA)                       :: 68
            rRNAs                             :: 2, 4, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 4, 2 (16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 54
            CDSs (without protein)            :: 54
            Pseudo Genes (ambiguous residues) :: 0 of 54
            Pseudo Genes (frameshifted)       :: 27 of 54
            Pseudo Genes (incomplete)         :: 27 of 54
            Pseudo Genes (internal stop)      :: 10 of 54
            Pseudo Genes (multiple problems)  :: 10 of 54
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1252
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMD00233528-rid16434743.denovo.260"
                     /strain="K18-6-464"
                     /db_xref="taxon:1280"
                     /geo_loc_name="Japan: Niigata"
     gene            complement(<1..68)
                     /locus_tag="O7798_002682"
     CDS             complement(<1..68)
                     /locus_tag="O7798_002682"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001284656.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="penicillinase repressor BlaI"
                     /protein_id="HDC2864864.1"
                     /translation="MANKQVEISMAEWDVMNIIWNK"
     gene            complement(58..>1252)
                     /locus_tag="O7798_002683"
     CDS             complement(58..>1252)
                     /locus_tag="O7798_002683"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001096376.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="beta-lactam sensor/signal transducer BlaR1"
                     /protein_id="HDC2864865.1"
                     /translation="SINDKKLKYIILHEYAHAKNRDTLHLIIFNIFSIAMSYNPLIQI
                     VKRKMIHDNEVEADRFVLNNINKNEFKSYAEAIMDSVLKTPFFNKNILSHSFNGKKSL
                     LKRRLINIKEANLKKQSKLILIFICIFTFFIMIIQSQFLMGQSLTDYNYKKPLQSDYQ
                     ILDESKNFGSNSGSFVMYSMKKDKYYIYNEKESRKRYSPDSTYKIYLALFGLDRHIIS
                     DKNSRMSWNHNHYPFDSWNKDQDLNTAIQNSVNWYFERISNQISKNYTSDQLKQLNYG
                     NKNLGSCKAYWLEDSLKISNLEQVIVLKNMMEQNNHFSKNEKKQLSSSLLIRKNENYE
                     LYGKTGTGIVNGKYNNGWFVGYVITNHDKYYFSTHLSDEKASGENAKLINEKILKEMG
                     VLNGQ"
BASE COUNT          408 a          188 c          140 g          516 t
ORIGIN      
        1 tttttattcc atattatatt cataacatcc cattcagcca tagatatttc aacttgctta
       61 ttggccattt aaaacaccca tttcttttaa tattttttca tttattaatt tagcattttc
      121 accagaggct ttttcatctg ataaatgtgt agaaaaataa tacttatcat gatttgtaat
      181 tacgtaacct acaaaccacc cattattgta cttcccgttt actatacctg tacctgtttt
      241 cccatacaat tcataatttt cattttttct aatcaataac gaagaagata attgtttctt
      301 ttcattttta ctaaaatgat tattttgttc catcatattt ttcaaaacta ttacttgttc
      361 aagattagat attttcaaac tatcttccaa ccaataggct ttacaacttc ccaaattttt
      421 attaccataa tttaattgct tgagttgatc agaagtatag ttctttgata tttgattact
      481 aatacgttcg aagtaccaat taactgagtt ttgtattgcc gtatttaaat cttgatcctt
      541 attccaagaa tcgaaaggat aatgattatg attccatgac atacgtgaat ttttatcact
      601 tataatatga cggtcaagtc caaacagtgc taaataaatt ttgtaagttg aatcaggaga
      661 atatcttttt ctactttctt tttcattata aatatagtat ttgtctttct tcatgctgta
      721 cataacgaaa gatccactat ttgaaccaaa atttttactt tcatctaaaa tttggtaatc
      781 gctttgcaag ggctttttat aattataatc agttaaggat tgccccatta aaaactggct
      841 ttgaattatc atgataaaaa aagtaaaaat acaaataaaa attagaatta attttgactg
      901 ctttttcaaa ttggcttctt ttatattaat taatcttctt ttgagtaatg attttttacc
      961 attaaatgaa tggcttaata tatttttgtt gaaaaatggg gtttttagta cggaatccat
     1021 aatagcttcc gcataagact taaattcatt tttgttaata ttattaagga caaatctatc
     1081 ggcttctact tcattgtcat gaatcatctt tctttttaca atttgtatta gtggattata
     1141 actcatagca atagaaaaaa tattaaagat aattaaatgc aaagtatctc tgtttttagc
     1201 atgagcatac tcgtgcaata ttatatattt tagttttttg tcatttatac tt
//
LOCUS       DALPQQ010000253         1245 bp    DNA     linear   BCT 22-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus strain K18-6-464
            SAMD00233528-rid16434743.denovo.261, whole genome shotgun sequence.
ACCESSION   DALPQQ010000253 DALPQQ010000000
VERSION     DALPQQ010000253.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMD00233528
            Sequence Read Archive: DRR236061
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 1245)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1245)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001543423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001543423.1
            Genome Coverage       :: 77x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/22/2022 17:09:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,811
            CDSs (total)                      :: 2,743
            Genes (coding)                    :: 2,689
            CDSs (with protein)               :: 2,689
            Genes (RNA)                       :: 68
            rRNAs                             :: 2, 4, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 4, 2 (16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 54
            CDSs (without protein)            :: 54
            Pseudo Genes (ambiguous residues) :: 0 of 54
            Pseudo Genes (frameshifted)       :: 27 of 54
            Pseudo Genes (incomplete)         :: 27 of 54
            Pseudo Genes (internal stop)      :: 10 of 54
            Pseudo Genes (multiple problems)  :: 10 of 54
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1245
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMD00233528-rid16434743.denovo.261"
                     /strain="K18-6-464"
                     /db_xref="taxon:1280"
                     /geo_loc_name="Japan: Niigata"
     gene            complement(657..>1245)
                     /locus_tag="O7798_002684"
     CDS             complement(657..>1245)
                     /locus_tag="O7798_002684"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500939.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDC2864866.1"
                     /translation="KYNEYFTNRDDTTLKITNLYIGQSFGTEGNRNVIDRIGKGHEKL
                     QEIMTYQPENRKTVLIFYKIQPDNIYITNQYGKEAVSRLKRILEQSIPNKEYIDLSEI
                     SLITFFKPEYNKQHVNEEFNSLSSSKIKNLAKENDGIIIYLNFKDVNYQLISEGNTFF
                     SAKPYLHCVFNKDILNMDKVDIENFFKSIEVKYSK"
BASE COUNT          423 a          194 c          149 g          479 t
ORIGIN      
        1 agttatctgt tttaatataa aacctaaaaa gtagaaacac cagcatcgca acaataaaat
       61 aaacaggaat aaaagctttc ttccaaaata tagaatcttt caattaagtc actccttatt
      121 ttgataacac tcttaaatca tggttcttga gttatcatct ggttatcatc cgatagctct
      181 ttcccttgaa tatctattat tagaacacta tcgtacggtc tccgcaagct aaatgacaat
      241 ttaataatgt acacttttga ttgtgtaagc atgtacaaat tatacgtgta aatcaataat
      301 tcatagttga attaattcta tacctgagac attaattcat ttatactcta ttccatattc
      361 cccacacaaa cgcaaaaaaa cacctcgaca taacatcgag gtgttttgta tatatatcgt
      421 ccgacaatta acgttttgag aattgaggtg aacgacgagc tgctttaaga atttgttttt
      481 ttacgttcag aaaattttag aatttcgcat gattatatag actgtcgtac accttgatat
      541 taaaggattt cttcaatttt gaatttcatt gattttcatc aaattgaagc aaagggtatt
      601 aacggggtat taatttttta aaaaaatctg ctggtcggtg gattcaataa ttgatcttat
      661 ttactgtatt tgacttctat acttttgaaa aaattttcta tatcaacttt atccatattt
      721 aaaatatctt tattgaacac acaatgcaaa tatggttttg cagaaaaaaa agtattgcct
      781 tcacttatca gttgataatt aacatcctta aaatttaaat aaataataat accatcattt
      841 tctttggcta aattctttat tttcgaagaa gataaagaat taaactcctc attcacatgt
      901 tgtttattat attctggttt aaaaaatgta attaatgata tctctgataa atcaatatat
      961 tctttattag gtatactttg ctctaaaatt ctttttaatc gagacacagc ctctttacca
     1021 tattggtttg taatataaat attgtcaggc tgtatcttgt aaaatattaa gacagtcttt
     1081 ctattttctg gctgataagt cataatttct tgtaattttt catgaccttt ccctattcta
     1141 tcaatgacat ttctattacc ctctgtacca aaagattgcc caatatataa attagtaatt
     1201 tttaatgtag tatcatctct gtttgtaaaa tattcattat atttt
//
LOCUS       DALPQQ010000254         1177 bp    DNA     linear   BCT 22-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus strain K18-6-464
            SAMD00233528-rid16434743.denovo.262, whole genome shotgun sequence.
ACCESSION   DALPQQ010000254 DALPQQ010000000
VERSION     DALPQQ010000254.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMD00233528
            Sequence Read Archive: DRR236061
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 1177)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1177)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001543423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001543423.1
            Genome Coverage       :: 77x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/22/2022 17:09:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,811
            CDSs (total)                      :: 2,743
            Genes (coding)                    :: 2,689
            CDSs (with protein)               :: 2,689
            Genes (RNA)                       :: 68
            rRNAs                             :: 2, 4, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 4, 2 (16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 54
            CDSs (without protein)            :: 54
            Pseudo Genes (ambiguous residues) :: 0 of 54
            Pseudo Genes (frameshifted)       :: 27 of 54
            Pseudo Genes (incomplete)         :: 27 of 54
            Pseudo Genes (internal stop)      :: 10 of 54
            Pseudo Genes (multiple problems)  :: 10 of 54
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1177
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMD00233528-rid16434743.denovo.262"
                     /strain="K18-6-464"
                     /db_xref="taxon:1280"
                     /geo_loc_name="Japan: Niigata"
     gene            complement(<1..508)
                     /locus_tag="O7798_002685"
     CDS             complement(<1..508)
                     /locus_tag="O7798_002685"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001641610.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDC2864867.1"
                     /translation="MLYLNKYKERVTSVRIQNRWVVFILFLICSFGVLIGLYQYRHTK
                     TVDLSNLEINDIKLNEKFDKKGYEVNKKIKFDRFKFYNSKAHPDLTVKVREKDNIVKG
                     IILVRDEKIHTNFDGGIGSPINNAIENLGFGYKRTKVGNDFSSVKYIDRDNHLKLNLL
                     YQDLEIKRI"
     gene            629..>1177
                     /locus_tag="O7798_002686"
     CDS             629..>1177
                     /locus_tag="O7798_002686"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500640.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin family protein"
                     /protein_id="HDC2864868.1"
                     /translation="MTNLETYFKNSQPLNEYIDGMKTNQDTVLSIYQSFELPEDDSRI
                     KKIKEMNYSKVLVITEDWCGDAMMNLPILKHISEALNLEVRVFHRDDDTKLIDQYLTN
                     GKSRAIPIFVFLNDQFEQETVWGPRANEVQKFVTDVRADKLPSKDHPDYADLEKETHL
                     VISNRYKTDASFWKAVYNSILNK"
BASE COUNT          430 a          199 c          154 g          394 t
ORIGIN      
        1 caatacgttt aatttctaaa tcttgataaa gtaagtttaa ttttaaatgg ttatctctat
       61 caatatactt taccgatgag aaatcattgc caacttttgt tcttttatat ccgaatccaa
      121 gattttcaat cgcgttattt atcggcgaac caattccccc atcaaaatta gtatgtatct
      181 tttcatctct tactaatatt atccccttaa cgatgttatc cttttctctc actttaacgg
      241 taagatcagg gtgagcttta ctgttataaa atttaaaacg atcaaactta atttttttat
      301 ttacttcata gcctttttta tcaaacttct catttaattt aatatcgttt atttcaagat
      361 tagacaaatc cacagttttc gtatgacgat attgatataa accaattaat acaccaaaag
      421 aacagattaa aaataatata aacacaaccc agcgattttg aatacgcact gatgtcaccc
      481 tttctttgta cttatttaaa tatagcataa ggtgcttccc gtttcatcct taacaaaaat
      541 taacaaagaa tttgcaatta atttatttca ttacctttta ttactataaa ttggtataat
      601 gttgtaaatg ctaaaggagg tttttacaat gacaaattta gaaacttatt tcaaaaatag
      661 ccaaccctta aatgaataca ttgatggaat gaagacaaat caagataccg ttctcagtat
      721 ctatcaatca tttgagttac cagaagatga ttcacgcatc aaaaaaataa aagagatgaa
      781 ttattctaaa gtattagtaa ttactgaaga ctggtgtgga gatgcaatga tgaatctccc
      841 aattctaaaa cacatcagtg aagcattaaa tttagaagta cgcgtgttcc atagagatga
      901 tgatacaaaa ctgatcgatc aatatttaac aaatggtaaa tcacgtgcaa ttcctatctt
      961 cgtattcttg aatgatcaat tcgaacaaga aacagtttgg ggaccaagag caaatgaagt
     1021 ccaaaaattt gtaactgatg ttcgtgctga taaattaccg agcaaagatc atccagacta
     1081 tgcagattta gaaaaagaaa cacacttagt tatatcaaac cgctataaaa ctgacgcttc
     1141 attttggaaa gcagtttata attccatcct aaataaa
//
LOCUS       DALPQQ010000255         1173 bp    DNA     linear   BCT 22-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus strain K18-6-464
            SAMD00233528-rid16434743.denovo.263, whole genome shotgun sequence.
ACCESSION   DALPQQ010000255 DALPQQ010000000
VERSION     DALPQQ010000255.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMD00233528
            Sequence Read Archive: DRR236061
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 1173)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1173)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001543423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001543423.1
            Genome Coverage       :: 77x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/22/2022 17:09:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,811
            CDSs (total)                      :: 2,743
            Genes (coding)                    :: 2,689
            CDSs (with protein)               :: 2,689
            Genes (RNA)                       :: 68
            rRNAs                             :: 2, 4, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 4, 2 (16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 54
            CDSs (without protein)            :: 54
            Pseudo Genes (ambiguous residues) :: 0 of 54
            Pseudo Genes (frameshifted)       :: 27 of 54
            Pseudo Genes (incomplete)         :: 27 of 54
            Pseudo Genes (internal stop)      :: 10 of 54
            Pseudo Genes (multiple problems)  :: 10 of 54
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1173
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMD00233528-rid16434743.denovo.263"
                     /strain="K18-6-464"
                     /db_xref="taxon:1280"
                     /geo_loc_name="Japan: Niigata"
     gene            <1..>1173
                     /locus_tag="O7798_002687"
     rRNA            <1..>1173
                     /locus_tag="O7798_002687"
                     /product="23S ribosomal RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF02541"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF02541"
BASE COUNT          297 a          267 c          361 g          248 t
ORIGIN      
        1 cactgccgag aaaagcctct agatagaaaa taggtgcccg taccgcaaac cgacacaggt
       61 agtcaagatg agaattctaa ggtgagcgag cgaactctcg ttaaggaact cggcaaaatg
      121 accccgtaac ttcgggagaa ggggtgctct ttagggttaa cgcccagaag agccgcagtg
      181 aataggccca agcgactgtt tatcaaaaac acaggtctct gctaaaccgt aaggtgatgt
      241 ataggggctg acgcctgccc ggtgctggaa ggttaagagg agtggttagc ttctgcgaag
      301 ctacgaatcg aagccccagt aaacggcggc cgtaactata acggtcctaa ggtagcgaaa
      361 ttccttgtcg ggtaagttcc gacccgcacg aaaggcgtaa cgatttgggc actgtctcaa
      421 cgagagactc ggtgaaatca tagtacctgt gaagatgcag gttacccgcg acaggacgga
      481 aagaccccgt ggagctttac tgtagcctga tattgaaatt cggcacagct tgtacaggat
      541 aggtaggagc ctttgaaacg tgagcgctag cttacgtgga ggcgctggtg ggatactacc
      601 ctagctgtgt tggctttcta acccgcacca cttatcgtgg tgggagacag tgtcaggcgg
      661 gcagtttgac tggggcggtc gcctcctaaa aggtaacgga ggcgctcaaa ggttccctca
      721 gaatggttgg aaatcattca tagagtgtaa aggcataagg gagcttgact gcgagaccta
      781 caagtcgagc agggtcgaaa gacggactta gtgatccggt ggttccgcat ggaagggcca
      841 tcgctcaacg gataaaagct accccgggga taacaggctt atctccccca agagttcaca
      901 tcgacgggga ggtttggcac ctcgatgtcg gctcatcgca tcctggggct gtagtcggtc
      961 ccaagggttg ggctgttcgc ccattaaagc ggtacgcgag ctgggttcag aacgtcgtga
     1021 gacagttcgg tccctatccg tcgtgggcgt aggaaatttg agaggagctg tccttagtac
     1081 gagaggaccg ggatggacat acctctggtg taccagttgt cgtgccaacg gcatagctgg
     1141 gtagctatgt gtggacggga taagtgctga aag
//
LOCUS       DALPQQ010000256         1163 bp    DNA     linear   BCT 22-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus strain K18-6-464
            SAMD00233528-rid16434743.denovo.264, whole genome shotgun sequence.
ACCESSION   DALPQQ010000256 DALPQQ010000000
VERSION     DALPQQ010000256.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMD00233528
            Sequence Read Archive: DRR236061
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 1163)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1163)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001543423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001543423.1
            Genome Coverage       :: 77x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/22/2022 17:09:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,811
            CDSs (total)                      :: 2,743
            Genes (coding)                    :: 2,689
            CDSs (with protein)               :: 2,689
            Genes (RNA)                       :: 68
            rRNAs                             :: 2, 4, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 4, 2 (16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 54
            CDSs (without protein)            :: 54
            Pseudo Genes (ambiguous residues) :: 0 of 54
            Pseudo Genes (frameshifted)       :: 27 of 54
            Pseudo Genes (incomplete)         :: 27 of 54
            Pseudo Genes (internal stop)      :: 10 of 54
            Pseudo Genes (multiple problems)  :: 10 of 54
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1163
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMD00233528-rid16434743.denovo.264"
                     /strain="K18-6-464"
                     /db_xref="taxon:1280"
                     /geo_loc_name="Japan: Niigata"
     gene            complement(172..>1163)
                     /gene="cls"
                     /locus_tag="O7798_002688"
     CDS             complement(172..>1163)
                     /gene="cls"
                     /locus_tag="O7798_002688"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499840.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="cardiolipin synthase"
                     /protein_id="HDC2864869.1"
                     /translation="LDGLGKRILHALEEKLKQGLEVKILYDDVGSKNVKMANFDHFKS
                     LGGEVEAFFASKLPLLNFRMNNRNHRKIIVIDGQLGYVGGFNIGDEYLGLGKLGYWRD
                     THLRIQGDAVDALQLRFILDWNSQAHRPQFEYDVKYFPKKNGPLGNSPIQIAASGPAS
                     DWHQIEYGYTKMIMSAKKSVYLQSPYFIPDNSYINAIKIAAKSGVDVHLMIPCKPDHP
                     LVYWATFSNASDLLSSGVKIYTYENGFIHSKMCLIDDEIVSVGTANMDFRSFELNFEV
                     NAFVYDENLAKDLRVAYEHDITKSKQLTKESYANRPLSVKFKESLAKLVSPIL"
BASE COUNT          384 a          205 c          148 g          426 t
ORIGIN      
        1 tatttttttc ttaatttaat attagtaaat ttattagatt taaaatagaa cactttgtca
       61 tagatttgaa atgacaaatg tcattattag atttacataa tatatttatc gttattttaa
      121 ttttgggcaa aataaaaaga gcctctataa tcgagactcc ttacaaataa attataaaat
      181 tggcgaaact aattttgcta acgattcttt gaatttaaca gacagcggtc tattggcata
      241 tgattctttg gttagttgtt ttgattttgt aatatcatgt tcataagcca cccttaaatc
      301 tttagcaaga ttttcatcat atacaaaggc atttacttca aaatttaatt caaaacttct
      361 aaagtccata tttgctgtgc ccactgatac gatttcatca tcaattaagc acattttaga
      421 atgtataaat ccattttcat acgtataaat tttaacacca cttgataata agtcagaggc
      481 atttgaaaat gtcgcccaat atactaatgg atgatctggc ttacatggaa tcattaaatg
      541 tacatctaca cctgatttag cagcaatttt aatggcattt atatatgaat tatccggaat
      601 gaaatatggt gattgtaaat atacagattt ctttgcactc ataatcattt ttgtataacc
      661 gtattcaatt tgatgccagt cactagccgg gccacttgca gctatttgaa ttggtgaatt
      721 gcccaatggt ccgttctttt tagggaaata cttaacatca tattcaaatt gtggacggtg
      781 cgcttgcgaa ttccagtcta aaataaatcg caactgcagt gcatcaaccg catccccttg
      841 tatacgtaaa tgcgtatctc tccaatatcc taattttcct aatcctagat attcatcacc
      901 aatgttaaat cctccgacat aacctagttg accatcgatt acgatgattt ttctatgatt
      961 tctattattc attctgaaat tcaataacgg taattttgaa gcaaaaaatg cttcaacttc
     1021 tccacctaac gatttaaaat gatcaaaatt tgccatctta acatttttag atccaacatc
     1081 atcatataat atttttactt ctagaccttg tttcaatttt tcttctaaag catgtaaaat
     1141 tcttttacct aaaccatcta aag
//
LOCUS       DALPQQ010000257         1139 bp    DNA     linear   BCT 22-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus strain K18-6-464
            SAMD00233528-rid16434743.denovo.265, whole genome shotgun sequence.
ACCESSION   DALPQQ010000257 DALPQQ010000000
VERSION     DALPQQ010000257.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMD00233528
            Sequence Read Archive: DRR236061
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 1139)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1139)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001543423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001543423.1
            Genome Coverage       :: 77x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/22/2022 17:09:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,811
            CDSs (total)                      :: 2,743
            Genes (coding)                    :: 2,689
            CDSs (with protein)               :: 2,689
            Genes (RNA)                       :: 68
            rRNAs                             :: 2, 4, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 4, 2 (16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 54
            CDSs (without protein)            :: 54
            Pseudo Genes (ambiguous residues) :: 0 of 54
            Pseudo Genes (frameshifted)       :: 27 of 54
            Pseudo Genes (incomplete)         :: 27 of 54
            Pseudo Genes (internal stop)      :: 10 of 54
            Pseudo Genes (multiple problems)  :: 10 of 54
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1139
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMD00233528-rid16434743.denovo.265"
                     /strain="K18-6-464"
                     /db_xref="taxon:1280"
                     /geo_loc_name="Japan: Niigata"
     gene            226..1128
                     /locus_tag="O7798_002689"
     CDS             226..1128
                     /locus_tag="O7798_002689"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499459.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fumarylacetoacetate hydrolase family protein"
                     /protein_id="HDC2864870.1"
                     /translation="MKFLSFKYNDKTSYGVKVKREDAVWDLTQVFADFAEGDFHPKTL
                     LAGLQQNHTLDFQEQVRKAVVAAEDSGKAEDYKISFNDIEFLPPVTPPNNVIAFGRNY
                     KDHANELNHEVEKLYVFTKAASSLTGDNATIPNHKDITDQLDYEGELGIVIGKSGEKI
                     PKALALDYVYGYTIINDITDRKAQSEQDQAFLSKSLTGGCPMGPYIVTKDELPLPENV
                     NIVTKVNNEIRQDGNTGEMILKIDELIEEISKYVALHPGDIIATGTPAGVGAGMQPPK
                     FLQPGDEVKVTIDNIGTLTTYIAK"
BASE COUNT          435 a          157 c          196 g          351 t
ORIGIN      
        1 cttaataaag aagttaaagg ttatttatac ttcttcaaat ttggtacatt gcaactatag
       61 tattttgatt ttcaaaagaa taaaaaataa tttcgattaa gtgcaaagtc cttgtagcag
      121 aatgaacaca actcattttc aaaattgtct tacttattta tttgttattt gataacgaaa
      181 aaagttataa tgtgaattaa gataaagatg aggagttgag aatgaatgaa attcttatca
      241 ttcaagtata atgacaaaac ttcatatggc gttaaagtaa aacgcgaaga tgctgtatgg
      301 gatttaacac aagtatttgc tgactttgca gaaggagatt tccatcctaa aacattgtta
      361 gctggtttac aacaaaatca tactttagat tttcaagaac aagtacgtaa agcagttgta
      421 gcagcagaag atagcggcaa agctgaagac tataaaattt catttaatga cattgaattt
      481 ttaccaccag taacacctcc gaataatgtg attgcttttg gtagaaatta caaagatcat
      541 gcgaacgaat taaatcatga agtggaaaaa ttatatgtat ttacaaaagc agcgtcatct
      601 ttaacaggag ataatgcaac aattccaaat cataaagata ttactgatca attagattat
      661 gaaggtgaat taggtattgt tattggtaag tctggtgaaa agattccaaa agcattagct
      721 ttagattatg tttacggcta tacaattatt aacgatatca ctgatcgcaa agcacaaagt
      781 gaacaagatc aagcattttt atcaaaaagt ttaactggcg gttgcccaat gggtccttat
      841 atcgttacta aagacgaact accattacct gaaaatgtaa atattgttac aaaagttaac
      901 aatgaaatta gacaagatgg taacactggc gaaatgattc ttaaaattga tgaattaata
      961 gaagaaattt caaaatatgt tgcactacat ccgggagata ttattgcaac tggtacacca
     1021 gcaggcgttg gtgcaggtat gcaaccacct aaatttttac aaccaggtga tgaagttaaa
     1081 gtgactattg ataatattgg aacgctgaca acttatatcg ctaaataatt atcatttaa
//
LOCUS       DALPQQ010000258         1122 bp    DNA     linear   BCT 22-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus strain K18-6-464
            SAMD00233528-rid16434743.denovo.266, whole genome shotgun sequence.
ACCESSION   DALPQQ010000258 DALPQQ010000000
VERSION     DALPQQ010000258.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMD00233528
            Sequence Read Archive: DRR236061
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 1122)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1122)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001543423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001543423.1
            Genome Coverage       :: 77x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/22/2022 17:09:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,811
            CDSs (total)                      :: 2,743
            Genes (coding)                    :: 2,689
            CDSs (with protein)               :: 2,689
            Genes (RNA)                       :: 68
            rRNAs                             :: 2, 4, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 4, 2 (16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 54
            CDSs (without protein)            :: 54
            Pseudo Genes (ambiguous residues) :: 0 of 54
            Pseudo Genes (frameshifted)       :: 27 of 54
            Pseudo Genes (incomplete)         :: 27 of 54
            Pseudo Genes (internal stop)      :: 10 of 54
            Pseudo Genes (multiple problems)  :: 10 of 54
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1122
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMD00233528-rid16434743.denovo.266"
                     /strain="K18-6-464"
                     /db_xref="taxon:1280"
                     /geo_loc_name="Japan: Niigata"
     gene            complement(43..426)
                     /locus_tag="O7798_002690"
     CDS             complement(43..426)
                     /locus_tag="O7798_002690"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000403836.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pathogenicity island protein"
                     /protein_id="HDC2864871.1"
                     /translation="MEIKQKYQLSKVVKILEVVLYEEDKFQSDKDYHYQDKAFYEYAL
                     KLVHNGLFNILAELDFENEAFLILDEVTMTLSDVMKETQHVYRYSVIDEKGEHKHTTD
                     RKGHVIGMLEWALDYIVGNIEVEEL"
     gene            complement(428..631)
                     /locus_tag="O7798_002691"
     CDS             complement(428..631)
                     /locus_tag="O7798_002691"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001231389.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pathogenicity island protein"
                     /protein_id="HDC2864872.1"
                     /translation="MRKQVIITKTVVGWYNIKDTQHNLMLNIPPKVFEQYFPDVSKDV
                     QVACLEMDLSKITEIKNKKKVGS"
     gene            complement(598..771)
                     /locus_tag="O7798_002692"
     CDS             complement(598..771)
                     /locus_tag="O7798_002692"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000784884.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pathogenicity island protein"
                     /protein_id="HDC2864873.1"
                     /translation="MKMYLTYICLVSLLTILLLAISNMYVAFSVYGMMVTYGFNLTGE
                     ITTCENKLLLQKQ"
     gene            complement(768..995)
                     /locus_tag="O7798_002693"
     CDS             complement(768..995)
                     /locus_tag="O7798_002693"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000164237.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HDC2864874.1"
                     /translation="MTKLTYPMLYITRKEKGDTQKKVASKLGISPQRYQLKESGKAIF
                     NLNECQILSEMYDMPIDELFSSKIKVEGSRQ"
BASE COUNT          349 a          208 c          119 g          446 t
ORIGIN      
        1 cacttcaata tcacacatta aatctttaat ttcccaattc atttataatt cctccacttc
       61 aatatttccc acaatgtaat ctaatgccca ctctaacatt ccaatcacgt gtcctttgcg
      121 atctgttgta tgtttatgtt cacctttttc atctatgaca ctataacggt aaacgtgttg
      181 tgtttctttc atgacatcac ttagcgtcat tgttacttca tcaagaatta aaaatgcttc
      241 attttcaaaa tctaattcag caagaatatt gaacaatcca ttatgaacta actttaaagc
      301 atattcataa aatgctttat cctgataatg atagtcctta tcggattgaa acttatcttc
      361 ctcgtataat actacttcta atattttaac cacttttgat aattgatatt tttgtttgat
      421 ttccatctta actacctacc tttttcttat ttttaatttc tgtaattttt gataaatcca
      481 tttctaaaca cgcaacttga acatctttac taacatcggg aaagtactgt tcaaatactt
      541 ttggcggtat atttaacatt aaattatgtt gagtatcttt aatgttgtac cagccaacta
      601 ctgtttttgt aataataact tgttttcgca cgttgtaatc tctcctgtta aattaaatcc
      661 ataagttacc atcatgccgt acacactaaa agcgacatac atgttagata ttgctagtaa
      721 taatattgtt aacaatgaaa ctaagcagat ataagttaag tacattttca ttgccttgac
      781 ccctctactt taatttttga tgaaaataac tcatcaattg gcatgtcata catttctgaa
      841 agaatctgac actcatttaa attaaatatt gctttaccac tttcctttaa ctggtagcgt
      901 tgtggactaa taccaagttt gctagcaact ttcttttgtg tgtcaccttt ttcttttcta
      961 gtaatgtata acattggata agttagtttt gtcattctaa tcactcctaa acgaaacttt
     1021 atgctactta ttaattaaaa aaaatatcat caatagtaat gtctttgata ccattttcta
     1081 ttaatttatt ttttataaac accttctctg aatctttaaa tg
//
LOCUS       DALPQQ010000259         1093 bp    DNA     linear   BCT 22-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus strain K18-6-464
            SAMD00233528-rid16434743.denovo.267, whole genome shotgun sequence.
ACCESSION   DALPQQ010000259 DALPQQ010000000
VERSION     DALPQQ010000259.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMD00233528
            Sequence Read Archive: DRR236061
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 1093)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1093)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001543423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001543423.1
            Genome Coverage       :: 77x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/22/2022 17:09:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,811
            CDSs (total)                      :: 2,743
            Genes (coding)                    :: 2,689
            CDSs (with protein)               :: 2,689
            Genes (RNA)                       :: 68
            rRNAs                             :: 2, 4, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 4, 2 (16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 54
            CDSs (without protein)            :: 54
            Pseudo Genes (ambiguous residues) :: 0 of 54
            Pseudo Genes (frameshifted)       :: 27 of 54
            Pseudo Genes (incomplete)         :: 27 of 54
            Pseudo Genes (internal stop)      :: 10 of 54
            Pseudo Genes (multiple problems)  :: 10 of 54
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1093
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMD00233528-rid16434743.denovo.267"
                     /strain="K18-6-464"
                     /db_xref="taxon:1280"
                     /geo_loc_name="Japan: Niigata"
     gene            93..353
                     /locus_tag="O7798_002694"
                     /pseudo
     CDS             93..353
                     /locus_tag="O7798_002694"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001282612.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="minor capsid protein"
     gene            402..749
                     /locus_tag="O7798_002695"
                     /pseudo
     CDS             402..749
                     /locus_tag="O7798_002695"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002456552.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            760..954
                     /locus_tag="O7798_002696"
     CDS             760..954
                     /locus_tag="O7798_002696"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499835.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDC2864875.1"
                     /translation="MRIEDAYRKDVIITLLNNEEYEGFVTDYENEFESETGNLVVDIQ
                     TDFAVYSFDETEIKSIRLLK"
BASE COUNT          473 a          113 c          194 g          313 t
ORIGIN      
        1 gaaaaagaat tcaaattcaa aagataaata gcatcctttt tagacagata aagagaaagt
       61 ggtgctattt ttatacgctt ttttaactat ttactgaaaa tgcagaagca caaaagttaa
      121 catatttaaa agaacttggt gaagatggcg aatataaata tgttgccaaa atagatagta
      181 aaacatctaa attatgtcat tcacttaacg gaaaaatatt taaagttaaa gatatgatac
      241 caggtgtgaa tgcgccacct atgcatcctt ggtgtagaag taccacagtg ccacatgttg
      301 gcaattggcg ggacaagttc tttaaagagc gtgaaggtaa atatcaagta gaagtaaaag
      361 aagcataatt acaggaaaaa gctaaaaacc agatgaaaga aatgattaaa aatggtaaaa
      421 taaaaataga aataaattgc ggaaaataaa atagatatat gttaggtcat cacctatata
      481 atgaaaataa aaaaagagcc attttaaata ataagaaatt gcctagctat acaatacttt
      541 ctatagattt attgaatgaa ttgttaagag aaaaaatgtc aacaggcaat ctaatattaa
      601 gtgatgagcg atttgatttg aaagagatta ttaattttaa tcaaattatt ggaaaaatac
      661 atatcgaaaa tgtgtatatt gaaaccagaa agggaaaagt gcattattcg aagacaggtg
      721 ctcatatagt accttatatt gataagtagg taaaaagtat tgagaattga agatgcatat
      781 cgtaaagatg ttattatcac gcttttgaat aatgaagaat acgaagggtt tgtaactgac
      841 tatgaaaatg aattcgagag cgaaacagga aatcttgttg tagatataca gactgatttt
      901 gctgtttatt cgtttgatga aactgagata aaaagtatta gattattaaa ataattacaa
      961 aatagcatcc tttctacaaa aagctaaaaa agaaatgctt gaaatgataa gtaatggtaa
     1021 aatgacgatg aaattgaata atgttaagca aaagcgtcat attttatgca caaatgaata
     1081 taataataag aaa
//
LOCUS       DALPQQ010000260         1087 bp    DNA     linear   BCT 22-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus strain K18-6-464
            SAMD00233528-rid16434743.denovo.268, whole genome shotgun sequence.
ACCESSION   DALPQQ010000260 DALPQQ010000000
VERSION     DALPQQ010000260.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMD00233528
            Sequence Read Archive: DRR236061
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 1087)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1087)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001543423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001543423.1
            Genome Coverage       :: 77x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/22/2022 17:09:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,811
            CDSs (total)                      :: 2,743
            Genes (coding)                    :: 2,689
            CDSs (with protein)               :: 2,689
            Genes (RNA)                       :: 68
            rRNAs                             :: 2, 4, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 4, 2 (16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 54
            CDSs (without protein)            :: 54
            Pseudo Genes (ambiguous residues) :: 0 of 54
            Pseudo Genes (frameshifted)       :: 27 of 54
            Pseudo Genes (incomplete)         :: 27 of 54
            Pseudo Genes (internal stop)      :: 10 of 54
            Pseudo Genes (multiple problems)  :: 10 of 54
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1087
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMD00233528-rid16434743.denovo.268"
                     /strain="K18-6-464"
                     /db_xref="taxon:1280"
                     /geo_loc_name="Japan: Niigata"
     gene            133..>1087
                     /locus_tag="O7798_002697"
     CDS             133..>1087
                     /locus_tag="O7798_002697"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499870.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="exonuclease SbcCD subunit D"
                     /protein_id="HDC2864876.1"
                     /translation="MKIIHTADWHLGKILNGKQLLEDQAYILDMFVEKMKEEEPDIIV
                     IAGDLYDTTYPSKDAIMLLEQAIGKLNLELRIPIIIISGNHDGKERLNYGASWFEHNQ
                     LFIRTDFTSINSPIEINGVNFYTLPYATVSEMKHYFEDDTIETHQQGITRCIETIAPE
                     IDEDAVNILISHLTVQGGKTSDSERPLTIGTVESVQKGVFDIFDYVMLGHLHHPFSIE
                     DDKIKYSGSLLQYSFSEAGQAKGYRRVTINDGIINDVFIPLKPLRQLEIISGEYNDVI
                     NEKVHVKNKDNYLHFKLKNMSHITDPMMSLKQIYPNTLALTN"
BASE COUNT          405 a          145 c          198 g          339 t
ORIGIN      
        1 atcaattaat tacttttaaa accacttgtg atcgacttct aaatcagtca atgagtggtt
       61 ttaattttac ttgaaaaggt gaaatgatta tattaaaata aaagcgaaca aatgttctat
      121 atggaggcag taatgaaaat tatacataca gcagactggc acttagggaa aatattaaat
      181 ggcaaacagc ttttagaaga tcaagcgtat attttagata tgttcgtaga aaaaatgaaa
      241 gaagaagaac ctgatatcat tgtgatagct ggagatttat atgacacaac atatccaagt
      301 aaagatgcaa tcatgttatt agaacaagcg attggaaagt taaatttaga actgcgtata
      361 ccaataatta ttattagtgg aaatcacgat ggtaaagaga ggttaaacta tggggcgagt
      421 tggtttgaac ataatcagtt atttataaga acagatttta catcgattaa ttcaccaata
      481 gagataaatg gggttaattt ttatacactc ccttatgcta ctgtgagcga aatgaaacac
      541 tactttgaag atgacaccat tgaaacacat caacagggaa ttacgcgctg tattgaaaca
      601 atagcaccgg aaattgatga agatgccgtc aatattttaa ttagtcatct gactgttcaa
      661 ggtggaaaga catctgattc tgaaagacca ttaactattg gaacggttga atcagttcag
      721 aaaggtgttt ttgatatatt tgattatgtc atgctaggtc acttgcatca tccatttagt
      781 atagaagacg acaaaattaa atatagtggc tccttattgc agtattcatt ttcggaagcg
      841 ggtcaagcta aagggtatag acgtgtaaca attaatgatg gcattattaa cgatgtattt
      901 attcctctta agccacttag acaattggaa attatctcag gcgaatataa tgatgttatt
      961 aatgaaaaag ttcatgtgaa aaataaagat aattatttac attttaaact taaaaatatg
     1021 tctcatatta ctgatccaat gatgagttta aaacaaattt atcctaatac tttagcgctg
     1081 acgaatg
//
LOCUS       DALPQQ010000261         1060 bp    DNA     linear   BCT 22-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus strain K18-6-464
            SAMD00233528-rid16434743.denovo.269, whole genome shotgun sequence.
ACCESSION   DALPQQ010000261 DALPQQ010000000
VERSION     DALPQQ010000261.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMD00233528
            Sequence Read Archive: DRR236061
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 1060)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1060)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001543423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001543423.1
            Genome Coverage       :: 77x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/22/2022 17:09:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,811
            CDSs (total)                      :: 2,743
            Genes (coding)                    :: 2,689
            CDSs (with protein)               :: 2,689
            Genes (RNA)                       :: 68
            rRNAs                             :: 2, 4, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 4, 2 (16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 54
            CDSs (without protein)            :: 54
            Pseudo Genes (ambiguous residues) :: 0 of 54
            Pseudo Genes (frameshifted)       :: 27 of 54
            Pseudo Genes (incomplete)         :: 27 of 54
            Pseudo Genes (internal stop)      :: 10 of 54
            Pseudo Genes (multiple problems)  :: 10 of 54
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1060
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMD00233528-rid16434743.denovo.269"
                     /strain="K18-6-464"
                     /db_xref="taxon:1280"
                     /geo_loc_name="Japan: Niigata"
     gene            <1..>1060
                     /locus_tag="O7798_002698"
     CDS             <1..>1060
                     /locus_tag="O7798_002698"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500432.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HDC2864877.1"
                     /translation="YPYLLVQGEAGIGKSHLLAHLSKKLRDENHIIYLFLGQFFTKNE
                     DPWHQILNDLEVTNSVDNFLRSISNKAKETKKRAFIIIDALNEGEGKRLWGNYFQSFI
                     NHIKKYSNIALIFSIRTPFEDVILPKNAIQDNNIVVFQHEGFSKEENYNPIVSFCDFY
                     GLELPKLPILNPEFNNPLFLKLMCEYCVNKFKEFDQTISVAELFTNVLKTVNINLSKE
                     DKFDFDKNINVVQKVIKGLVELMNDSEFNQLNYEESYTVVNNIAKEYVQKSNRFLEAL
                     IDENILIKNTGYKGEMIIYFSYERMGDYFLSEYLLEKYRNVDKRDLVTKLQSDEKVTR
                     YFQKEDDLSYNRGLINELF"
BASE COUNT          416 a          111 c          166 g          367 t
ORIGIN      
        1 ttatccttat ttgctagttc aaggtgaagc tggcatagga aaatcacacc ttttagcgca
       61 tctatctaaa aaacttagag atgaaaatca tattatttat ctgtttttgg gacaattttt
      121 tactaaaaat gaagatccat ggcatcaaat acttaatgat ttagaagtta caaattctgt
      181 tgataatttt ttaaggtcaa taagtaataa ggccaaagaa acaaaaaaaa gagcttttat
      241 tattattgat gcgcttaatg aaggtgaagg taaaaggtta tggggaaatt attttcaaag
      301 ctttatcaac catataaaga agtattctaa tatagcttta atattttcta ttagaacccc
      361 ttttgaagat gttatattac ccaaaaacgc aatacaagat aacaatattg tagtatttca
      421 gcatgaaggt tttagtaagg aagaaaacta taatccaatt gtatcttttt gtgattttta
      481 tggattagag ctacctaagt tacctatatt aaatccagaa ttcaacaatc cattattttt
      541 aaaactaatg tgtgagtact gtgtaaataa atttaaggaa tttgaccaaa ctataagtgt
      601 tgcagagcta tttacaaatg ttcttaagac agtaaatatt aatttatcta aggaagataa
      661 atttgatttt gataaaaata ttaatgttgt acaaaaagta ataaaaggat tagttgaatt
      721 aatgaacgac tcagaattta atcaactaaa ttatgaggaa tcctatactg ttgttaataa
      781 tatagctaaa gagtatgttc aaaagtcaaa tagattttta gaagcgctaa tagatgaaaa
      841 tatattaatt aaaaatactg gctataaagg tgaaatgatt atttattttt cgtatgagcg
      901 tatgggagat tactttttat cagaatacct tttagagaaa tatagaaatg ttgataaaag
      961 agatttagta actaaattac agtcagatga aaaagtgaca aggtattttc aaaaggaaga
     1021 cgatttatct tataatagag gtcttattaa tgaacttttt
//
LOCUS       DALPQQ010000262         1035 bp    DNA     linear   BCT 22-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus strain K18-6-464
            SAMD00233528-rid16434743.denovo.270, whole genome shotgun sequence.
ACCESSION   DALPQQ010000262 DALPQQ010000000
VERSION     DALPQQ010000262.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMD00233528
            Sequence Read Archive: DRR236061
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 1035)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1035)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001543423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001543423.1
            Genome Coverage       :: 77x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/22/2022 17:09:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,811
            CDSs (total)                      :: 2,743
            Genes (coding)                    :: 2,689
            CDSs (with protein)               :: 2,689
            Genes (RNA)                       :: 68
            rRNAs                             :: 2, 4, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 4, 2 (16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 54
            CDSs (without protein)            :: 54
            Pseudo Genes (ambiguous residues) :: 0 of 54
            Pseudo Genes (frameshifted)       :: 27 of 54
            Pseudo Genes (incomplete)         :: 27 of 54
            Pseudo Genes (internal stop)      :: 10 of 54
            Pseudo Genes (multiple problems)  :: 10 of 54
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1035
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMD00233528-rid16434743.denovo.270"
                     /strain="K18-6-464"
                     /db_xref="taxon:1280"
                     /geo_loc_name="Japan: Niigata"
     gene            1..699
                     /gene="sel"
                     /locus_tag="O7798_002699"
     CDS             1..699
                     /gene="sel"
                     /locus_tag="O7798_002699"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002955263.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="staphylococcal enterotoxin type L"
                     /protein_id="HDC2864878.1"
                     /translation="MVITLFIFSSNHTVLSNGDVGPGNLRNFYTKYEYVNLKNVKDKN
                     SPESHRLEYSYKNDTLYAEFDNEYITSDLKGKNVDIFGISYKYGSNSRTIYGGVTKAE
                     NNKLDSPRIIPINLIINGKHQTVTTKSVSTDKKMVTAQEIDVKLRKYLQDEFNIYGHN
                     DTGKGKEYGTSSKFYSGFDKGSVVFHMNDGSNFSYDLFYTGYGLPESFLKIYKDNKTV
                     DSTQFHLDVEISKR"
     gene            complement(866..>1035)
                     /locus_tag="O7798_002700"
     CDS             complement(866..>1035)
                     /locus_tag="O7798_002700"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000278088.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="exotoxin"
                     /protein_id="HDC2864879.1"
                     /translation="YIKFIENNGNTFWYDMMPAPGDKFDQSKYLMMYNDNKTVDSKSV
                     KIEVHLTTKNG"
BASE COUNT          381 a          151 c          148 g          355 t
ORIGIN      
        1 attgttatta ctttatttat tttttcttct aatcatacag tcttatctaa cggcgatgta
       61 ggtccaggaa acctaagaaa tttttatact aaatatgaat atgtgaattt aaagaatgtt
      121 aaagacaaaa attcaccaga atcacaccgc ttagaatact cgtataaaaa tgatacattg
      181 tatgctgaat ttgacaatga atatataact agtgatctaa agggaaaaaa tgtcgatatt
      241 tttggtataa gctataaata tggttctaac tctcgtacta tatatggtgg tgttactaaa
      301 gcagaaaaca ataaattaga ttcgccaaga ataataccta taaatttaat tatcaatggc
      361 aagcatcaaa cagttacaac taaaagtgtt tctacagata aaaaaatggt taccgcacaa
      421 gaaatagatg tcaaactaag aaaatacttg caagatgaat ttaatattta tggacacaat
      481 gatactggta aaggtaaaga atacggcact tcttcaaaat tttatagcgg ttttgataag
      541 gggagtgtag tattccatat gaatgatggt tctaatttct cgtatgattt attttacaca
      601 ggatacggtc ttccagaaag cttcttaaaa atttacaaag ataataaaac tgttgattca
      661 acacaatttc atctagatgt cgaaatttca aaaagatgat tccaattatt atagtttaga
      721 ttcactgtat aaataatcgc actttctatt aatatagaag tgcggtttaa tctatatata
      781 tgcatcctaa aaaggcaagc accgaagtac ttacctttca aatatatcta atactttcac
      841 tttttatatc aaaatcggat taacattatc cattctttgt tgtaaggtgg acttctatct
      901 tcacactttt agaatcaacc gttttattgt cgttgtacat cattaaatat ttagattggt
      961 caaacttatc gcctggtgca ggcatcatat cataccaaaa agtattgccg ttattttcaa
     1021 taaattttat atatc
//
LOCUS       DALPQQ010000263         1017 bp    DNA     linear   BCT 22-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus strain K18-6-464
            SAMD00233528-rid16434743.denovo.271, whole genome shotgun sequence.
ACCESSION   DALPQQ010000263 DALPQQ010000000
VERSION     DALPQQ010000263.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMD00233528
            Sequence Read Archive: DRR236061
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 1017)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1017)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001543423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001543423.1
            Genome Coverage       :: 77x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/22/2022 17:09:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,811
            CDSs (total)                      :: 2,743
            Genes (coding)                    :: 2,689
            CDSs (with protein)               :: 2,689
            Genes (RNA)                       :: 68
            rRNAs                             :: 2, 4, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 4, 2 (16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 54
            CDSs (without protein)            :: 54
            Pseudo Genes (ambiguous residues) :: 0 of 54
            Pseudo Genes (frameshifted)       :: 27 of 54
            Pseudo Genes (incomplete)         :: 27 of 54
            Pseudo Genes (internal stop)      :: 10 of 54
            Pseudo Genes (multiple problems)  :: 10 of 54
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1017
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMD00233528-rid16434743.denovo.271"
                     /strain="K18-6-464"
                     /db_xref="taxon:1280"
                     /geo_loc_name="Japan: Niigata"
     gene            164..265
                     /locus_tag="O7798_002701"
     CDS             164..265
                     /locus_tag="O7798_002701"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498638.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDC2864880.1"
                     /translation="MMKYPYMLININLSTITKNDKRFNATDDRINII"
     gene            281..733
                     /locus_tag="O7798_002702"
                     /pseudo
     CDS             281..733
                     /locus_tag="O7798_002702"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000662030.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA-dihydrouridine synthase"
     gene            complement(827..>1017)
                     /locus_tag="O7798_002703"
     CDS             complement(827..>1017)
                     /locus_tag="O7798_002703"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498636.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="sporadically distributed, TIGR04141 family
                     protein"
                     /protein_id="HDC2864881.1"
                     /translation="SSIDNMPIKDMVHTSNVINKNFQLTNLGSVLLKNKLVEWSLYLK
                     DQRINPIIYMETPTEDRN"
BASE COUNT          383 a          141 c          158 g          335 t
ORIGIN      
        1 aacataatac aaaaatggat tatcagtatt ttaatcgttt ttgctatagt tcaactcatt
       61 ttataaaact aatcctttta actcagacag caatttcccg aaaaataata cctcttattt
      121 aaacaaatat gtatgcagtt cggatttata taaataaaaa tttttgatga aatatccata
      181 tatgcttata aatataaatt tatcaactat aactaaaaat gataaaagat ttaacgccac
      241 tgatgaccga attaatatta tttaagtttt tatcaaacgc atgagtaaag tagatgcaca
      301 ttgggaatta atcgaagcta ttaaaaattt acgtgacgaa attgcaccaa acacattgtt
      361 aacaattaac gatgatattc ccgatagaaa aacaggactt gaacttgcag aaaaatatgg
      421 tattgatggc atcatgattg gtagaggcat tttccacaat ccattcactt ttgaaaaaga
      481 accacgcgaa cacacaagca aagaactatt agatttgttg agattgcatc tatcattgtt
      541 taacaaatat gagaaagatg aaatacgaca attcaagagt ttgcgtagat tctttaaaat
      601 ctatgtgcgt ggcataagag gcgctagcga acttcgccat caattgatga acacacaatc
      661 aattgcagaa gtacgagcac tactagatga atttgaagcc caaatggacg aagacgttaa
      721 aattgaatta tagtatgagt aataagggaa aggaggaatt taagtttcct cctttgtttg
      781 tgtgaaagtc ttttaggtat gaactagggt gatttaaaat aaaagtttaa tttctatctt
      841 cagttggcgt ttccatataa ataattggat taattctttg atcttttaaa tagagagacc
      901 actctactaa tttattttta agtaatactg aacctaaatt agttaattga aagtttttat
      961 ttattacgtt actagtatga accatatctt ttatgggcat attatcaata gatgata
//
LOCUS       DALPQQ010000264         1011 bp    DNA     linear   BCT 22-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus strain K18-6-464
            SAMD00233528-rid16434743.denovo.272, whole genome shotgun sequence.
ACCESSION   DALPQQ010000264 DALPQQ010000000
VERSION     DALPQQ010000264.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMD00233528
            Sequence Read Archive: DRR236061
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 1011)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1011)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001543423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001543423.1
            Genome Coverage       :: 77x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/22/2022 17:09:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,811
            CDSs (total)                      :: 2,743
            Genes (coding)                    :: 2,689
            CDSs (with protein)               :: 2,689
            Genes (RNA)                       :: 68
            rRNAs                             :: 2, 4, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 4, 2 (16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 54
            CDSs (without protein)            :: 54
            Pseudo Genes (ambiguous residues) :: 0 of 54
            Pseudo Genes (frameshifted)       :: 27 of 54
            Pseudo Genes (incomplete)         :: 27 of 54
            Pseudo Genes (internal stop)      :: 10 of 54
            Pseudo Genes (multiple problems)  :: 10 of 54
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1011
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMD00233528-rid16434743.denovo.272"
                     /strain="K18-6-464"
                     /db_xref="taxon:1280"
                     /geo_loc_name="Japan: Niigata"
     gene            347..748
                     /locus_tag="O7798_002704"
     CDS             347..748
                     /locus_tag="O7798_002704"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499656.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="formyl peptide receptor-like 1 inhibitory
                     protein"
                     /protein_id="HDC2864882.1"
                     /translation="MKKNITKTIIASTVIAAGLLTQTNDAKAFFSYEWKGLEIAKNLA
                     DQAKKDDERIDKLMKESDKNLTPYKAETVNDLYLIVKKLSQGDVKKAVVRIKDGGPRD
                     YYTFDLTRPLEENRKNIKVVKNGEIDSITWY"
     gene            708..800
                     /locus_tag="O7798_002705"
     CDS             708..800
                     /locus_tag="O7798_002705"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499655.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDC2864883.1"
                     /translation="MLKTVKSTRLLGIKKHTELNSCTPNVRKQC"
BASE COUNT          381 a          146 c          143 g          341 t
ORIGIN      
        1 tatatatcaa aacagctata tgtataacaa tttggagtgt ttgtctatcc aacttagcaa
       61 acaaaatgta gagaaatgta aatatcgttt tagcaataaa aattattcaa tcatagttga
      121 gtgacgttta ctactattat tatactatca acaaattcaa taatacctca aataaaaata
      181 ataccatcaa attcatcatt attctttttc gattgcatta aaccttatta atttgcactt
      241 aattttaatt aatgaagtgt taactggtaa atgtatgaaa ccgtttgtaa aatagcagtg
      301 tactcgcatt agtaagtaca aatttatttt acagggagaa cttattatga aaaaaaatat
      361 cacaaaaact attatcgcat ctacagtaat cgctgcaggt cttttaactc aaactaatga
      421 tgctaaagct ttctttagtt atgaatggaa aggtttagaa atcgcaaaaa atttagcaga
      481 tcaagctaaa aaggacgatg aacgtattga taagttaatg aaagagtctg ataaaaatct
      541 aactccttac aaagctgaaa ctgttaatga tctgtacctt attgttaaaa aattaagcca
      601 aggtgatgtg aagaaagcag ttgtcagaat taaagatggt ggtcctagag attactatac
      661 ttttgactta actcgtcctt tagaagagaa cagaaaaaat attaaagttg ttaaaaacgg
      721 tgaaatcgac tcgattactt ggtattaaaa aacatactga attaaatagt tgtacgccaa
      781 acgttagaaa acaatgctaa cgtattggcg tgctttttta ttttaagtaa cttccaattt
      841 atttagcatc tttacgactg tttaataaag tacgtatgat taacacggtt gccactatat
      901 ccgttacaat ttttatgatt gttaatacat tcgatttcct tttcacaata gccacctcgc
      961 ttgttcaaaa cataaacaac tattgcattc acttttaagt aattatttat a
//
LOCUS       DALPQQ010000265         1003 bp    DNA     linear   BCT 22-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus strain K18-6-464
            SAMD00233528-rid16434743.denovo.273, whole genome shotgun sequence.
ACCESSION   DALPQQ010000265 DALPQQ010000000
VERSION     DALPQQ010000265.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMD00233528
            Sequence Read Archive: DRR236061
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 1003)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1003)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001543423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001543423.1
            Genome Coverage       :: 77x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/22/2022 17:09:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,811
            CDSs (total)                      :: 2,743
            Genes (coding)                    :: 2,689
            CDSs (with protein)               :: 2,689
            Genes (RNA)                       :: 68
            rRNAs                             :: 2, 4, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 4, 2 (16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 54
            CDSs (without protein)            :: 54
            Pseudo Genes (ambiguous residues) :: 0 of 54
            Pseudo Genes (frameshifted)       :: 27 of 54
            Pseudo Genes (incomplete)         :: 27 of 54
            Pseudo Genes (internal stop)      :: 10 of 54
            Pseudo Genes (multiple problems)  :: 10 of 54
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1003
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMD00233528-rid16434743.denovo.273"
                     /strain="K18-6-464"
                     /db_xref="taxon:1280"
                     /geo_loc_name="Japan: Niigata"
     gene            108..>1003
                     /gene="hyl"
                     /locus_tag="O7798_002706"
     CDS             108..>1003
                     /gene="hyl"
                     /locus_tag="O7798_002706"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499665.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-hemolysin"
                     /protein_id="HDC2864884.1"
                     /translation="MKTRIVSSVTTTLLLGSILMNPVANAADSDINIKTGTTDIGSNT
                     TVKTGDLVTYDKENGMHKKVFYSFIDDKNHNKKLLVIRTKGTIAGQYRVYSEEGANKS
                     GLAWPSAFKVQLQLPDNEVAQISDYYPRNSIDTKEYMSTLTYGFNGNVTGDDTGKIGG
                     LIGANVSIGHTLKYVQPDFKTILESPTDKKVGWKVIFNNMVNQNWGPYDRDSWNPVYG
                     NQLFMKTRNGSMKAADNFLDPNKASSLLSSGFSPDFATVITMDRKASKQQTNIDVIYE
                     RVRDDYQLHWTSTNWKGTNTKD"
BASE COUNT          379 a          156 c          177 g          291 t
ORIGIN      
        1 aatataaacg attataaata tttgatatgt ctcaactgca atattctaaa ttgacatatt
       61 gattattgtt tcctcaaatc gttttaaaaa atagaaggat gatgaaaatg aaaacacgta
      121 tagtcagctc agtaacaaca acactattgc taggttccat attaatgaat cctgtcgcta
      181 atgccgcaga ttctgatatt aatattaaaa ccggtactac agatattgga agcaatacta
      241 cagtaaaaac aggtgattta gtcacttatg ataaagaaaa tggcatgcac aaaaaagtat
      301 tttatagttt tatcgatgat aaaaatcata ataaaaaact gctagttatt agaacgaaag
      361 gtaccattgc tggtcaatat agagtttata gcgaagaagg tgctaacaaa agtggtttag
      421 cctggccttc agcctttaag gtacagttgc aactacctga taatgaagta gctcaaatat
      481 ctgattacta tccaagaaat tcgattgata caaaagagta tatgagtact ttaacttatg
      541 gattcaacgg taatgttact ggtgatgata caggaaaaat tggcggcctt attggtgcaa
      601 atgtttcgat tggtcataca ctgaaatatg ttcaacctga tttcaaaaca attttagaga
      661 gcccaactga taaaaaagta ggctggaaag tgatatttaa caatatggtg aatcaaaatt
      721 ggggaccata tgatagagat tcttggaacc cggtatatgg caatcaactt ttcatgaaaa
      781 ctagaaatgg ctctatgaaa gcagcagata acttccttga tcctaacaaa gcaagttctc
      841 tattatcttc agggttttca ccagacttcg ctacagttat tactatggat agaaaagcat
      901 ccaaacaaca aacaaatata gatgtaatat acgaacgagt tcgtgatgac taccaattgc
      961 actggacttc aacaaattgg aaaggtacca atactaaaga taa
//
LOCUS       DALPQQ010000266         1000 bp    DNA     linear   BCT 22-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus strain K18-6-464
            SAMD00233528-rid16434743.denovo.274, whole genome shotgun sequence.
ACCESSION   DALPQQ010000266 DALPQQ010000000
VERSION     DALPQQ010000266.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMD00233528
            Sequence Read Archive: DRR236061
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 1000)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1000)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001543423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001543423.1
            Genome Coverage       :: 77x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/22/2022 17:09:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,811
            CDSs (total)                      :: 2,743
            Genes (coding)                    :: 2,689
            CDSs (with protein)               :: 2,689
            Genes (RNA)                       :: 68
            rRNAs                             :: 2, 4, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 4, 2 (16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 54
            CDSs (without protein)            :: 54
            Pseudo Genes (ambiguous residues) :: 0 of 54
            Pseudo Genes (frameshifted)       :: 27 of 54
            Pseudo Genes (incomplete)         :: 27 of 54
            Pseudo Genes (internal stop)      :: 10 of 54
            Pseudo Genes (multiple problems)  :: 10 of 54
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1000
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMD00233528-rid16434743.denovo.274"
                     /strain="K18-6-464"
                     /db_xref="taxon:1280"
                     /geo_loc_name="Japan: Niigata"
     gene            <1..>1000
                     /locus_tag="O7798_002707"
     rRNA            <1..>1000
                     /locus_tag="O7798_002707"
                     /product="23S ribosomal RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF02541"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF02541"
BASE COUNT          283 a          195 c          297 g          225 t
ORIGIN      
        1 ctgggaggac catctcctaa ggctaaatac tctctagtga ccgatagtga accagtaccg
       61 tgagggaaag gtgaaaagca ccccggaagg ggagtgaaat agaacctgaa accgtgtgct
      121 tacaagtagt cagagcccgt taatgggtga tggcgtgcct tttgtagaat gaaccggcga
      181 gttacgattt gatgcaaggt taagcagtaa atgtggagcc gtagcgaaag cgagtctgaa
      241 tagggcgttt agtatttggt cgtagacccg aaaccaggtg atctaccctt ggtcaggttg
      301 aagttcaggt aacactgaat ggaggaccga accgacttac gttgaaaagt gagcggatga
      361 actgagggta gcggagaaat tccaatcgaa cctggagata gctggttctc tccgaaatag
      421 ctttagggct agcctcaagt gatgattatt ggaggtagag cactgtttgg acgaggggcc
      481 cctctcgggt taccgaattc agacaaactc cgaatgccaa ttaatttaac ttgggagtca
      541 gaacatgggt gataaggtcc gtgttcgaaa gggaaacagc ccagaccacc agctaaggtc
      601 ccaaaatata tgttaagtgg aaaaggatgt ggcgttgccc agacaactag gatgttggct
      661 tagaagcagc catcatttaa agagtgcgta atagctcact agtcgagtga cactgcgccg
      721 aaaatgtacc ggggctaaac atattaccga agctgtggat tgtcctttgg acaatggtag
      781 gagagcgttc taagggcgtt gaagcatgat cgtaaggaca tgtggagcgc ttagaagtga
      841 gaatgccggt gtgagtagcg aaagacgggt gagaatcccg tccaccgatt gactaaggtt
      901 tccagaggaa ggctcgtccg ctctgggtta gtcgggtcct aagctgaggc cgacaggcgt
      961 aggcgatgga taacaggttg atattcctgt accacctata
//
LOCUS       DALPQQ010000267          962 bp    DNA     linear   BCT 22-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus strain K18-6-464
            SAMD00233528-rid16434743.denovo.275, whole genome shotgun sequence.
ACCESSION   DALPQQ010000267 DALPQQ010000000
VERSION     DALPQQ010000267.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMD00233528
            Sequence Read Archive: DRR236061
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 962)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 962)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001543423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001543423.1
            Genome Coverage       :: 77x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/22/2022 17:09:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,811
            CDSs (total)                      :: 2,743
            Genes (coding)                    :: 2,689
            CDSs (with protein)               :: 2,689
            Genes (RNA)                       :: 68
            rRNAs                             :: 2, 4, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 4, 2 (16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 54
            CDSs (without protein)            :: 54
            Pseudo Genes (ambiguous residues) :: 0 of 54
            Pseudo Genes (frameshifted)       :: 27 of 54
            Pseudo Genes (incomplete)         :: 27 of 54
            Pseudo Genes (internal stop)      :: 10 of 54
            Pseudo Genes (multiple problems)  :: 10 of 54
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..962
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMD00233528-rid16434743.denovo.275"
                     /strain="K18-6-464"
                     /db_xref="taxon:1280"
                     /geo_loc_name="Japan: Niigata"
     gene            complement(1..896)
                     /locus_tag="O7798_002708"
                     /pseudo
     CDS             complement(1..896)
                     /locus_tag="O7798_002708"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002440612.1"
                     /note="frameshifted; incomplete; missing C-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="replication initiation protein"
BASE COUNT          331 a          177 c          108 g          346 t
ORIGIN      
        1 aagtcgattt gtttttgcaa ttggttttca tttcctctta aagatatttt cattaaatct
       61 gtcaaatcaa tagacgctat atttttcaac ttatctctat atttattttt agtacgtctt
      121 tctaaatttc cccattcctc ttcttcgtga gttaataaat gaagcattgc tcgttcttgt
      181 atattttcaa tcatttttaa attcggtttt aaaatatgca aatcatcaaa acaatctttc
      241 caacaatcaa ccatatctcg ttttaattca atttccacac gccatagaaa tgttgaatca
      301 atttcaacat ctgcattatc tttacgttct tgtttttatt ataaatccga ataaacctat
      361 cactattacg cacaccaaaa tattttgttt ctggttttac attacgtcca taaaatatag
      421 ttttctttac cgacttatct gacaatgcat aatagtcatt taaatcaaat tcaaaatcaa
      481 aagccaaatc taatctcgta aaactaacat cgtccaaata actgatgata ttttgtttta
      541 accaaagcac ttcatcatgc gaaagcttat taggattaaa ttcaacgcgc atactacgtc
      601 tattccaaag agttgctttt attttgtcat attcaatata aactttttct ttaagagctt
      661 tagctttaaa gtttgtttgt aaaatatccc aaagccgaat ttcaggatta gtactcataa
      721 aatgtgaaag tctctctgcg ttagacatgc taagattccc aacaatcgtt atagcgtcaa
      781 aagacaattt tggaatagct agtgacatcc tatgtcgatt taaccggcta ttaccggata
      841 ttagagtatc cagttttaca aatggatgaa acgaaattca aaacactaaa aaatatgttc
      901 cactaacagc aaaaaaatac cattatgttc ctactaaaaa actaaaaata ctggagaaca
      961 aa
//
LOCUS       DALPQQ010000268          929 bp    DNA     linear   BCT 22-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus strain K18-6-464
            SAMD00233528-rid16434743.denovo.276, whole genome shotgun sequence.
ACCESSION   DALPQQ010000268 DALPQQ010000000
VERSION     DALPQQ010000268.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMD00233528
            Sequence Read Archive: DRR236061
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 929)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 929)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001543423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001543423.1
            Genome Coverage       :: 77x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/22/2022 17:09:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,811
            CDSs (total)                      :: 2,743
            Genes (coding)                    :: 2,689
            CDSs (with protein)               :: 2,689
            Genes (RNA)                       :: 68
            rRNAs                             :: 2, 4, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 4, 2 (16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 54
            CDSs (without protein)            :: 54
            Pseudo Genes (ambiguous residues) :: 0 of 54
            Pseudo Genes (frameshifted)       :: 27 of 54
            Pseudo Genes (incomplete)         :: 27 of 54
            Pseudo Genes (internal stop)      :: 10 of 54
            Pseudo Genes (multiple problems)  :: 10 of 54
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..929
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMD00233528-rid16434743.denovo.276"
                     /strain="K18-6-464"
                     /db_xref="taxon:1280"
                     /geo_loc_name="Japan: Niigata"
     gene            <1..402
                     /locus_tag="O7798_002709"
     CDS             <1..402
                     /locus_tag="O7798_002709"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499469.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDC2864885.1"
                     /translation="TCYTVMGFVSSRYLTKYLNYKFVSEICLVIFLIIYTYQSFIAVT
                     ISMIFLGISSGLTRPQTINKLSSSSNLRVMLNYAETLYFIFNIAFLLMGGYLYTIGTI
                     QYLILFISLLIFIYLIIIFYFTRREQHENKN"
     gene            386..901
                     /locus_tag="O7798_002710"
     CDS             386..901
                     /locus_tag="O7798_002710"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499470.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YbhB/YbcL family Raf kinase inhibitor-like
                     protein"
                     /protein_id="HDC2864886.1"
                     /translation="MKIKTEFKGNNIPYEYAAGADVSDSINGNPIKSFPFEVIELPEG
                     TKYLAWSLIDYDAIPVCGFAWIHWSVANVSVSGNSISIKADLSRTKGDYVQGKNSFTS
                     GLLAEDFSEIENHYVGPTPPDQDHQYELTVYALDHSLNLKNGFYLNEFLKEVNQHKID
                     QTSINLIGRKI"
BASE COUNT          331 a          112 c          147 g          339 t
ORIGIN      
        1 acttgttaca cagttatggg ttttgtatct tcacgttatt taactaaata cttgaattat
       61 aagtttgtgt cagaaatttg tttagtaata tttttaataa tatatacata tcaaagtttc
      121 atagcagtta ctatttctat gatattttta ggtatttctt cagggttaac tcgtccacaa
      181 actataaata aactttctag cagtagtaac ttaagagtga tgcttaatta tgcagaaacg
      241 ttatatttta tttttaatat cgcattttta cttatgggtg gttacttata tacaatagga
      301 actattcaat acttaatatt atttatttcg ttattaattt ttatatattt aataataata
      361 ttttatttta caaggagaga gcaacatgaa aataaaaact gaatttaaag ggaacaatat
      421 accatatgaa tacgcagcag gtgcagatgt gagtgattct attaacggga atccaattaa
      481 gtcatttcca tttgaagtaa ttgaattacc ggaagggact aaatatcttg cttggtcttt
      541 aattgactat gatgcaattc ctgtatgtgg ctttgcttgg attcattgga gtgtagctaa
      601 tgtaagtgtt agtggcaatt caatttctat aaaagcagat ttatcaagaa caaagggcga
      661 ctatgtacaa ggtaaaaata gctttactag tgggttgttg gctgaagatt tttcagaaat
      721 agaaaatcac tatgtaggac ctacaccacc tgatcaagat catcaatatg aattaacagt
      781 ttatgcgtta gatcattctt taaatttgaa gaatgggttc tacttgaatg aatttttaaa
      841 agaagtaaat caacataaaa ttgatcaaac aagtattaac cttataggaa gaaaaattta
      901 atactaaata tctcatcaat ataaaattg
//
LOCUS       DALPQQ010000269          921 bp    DNA     linear   BCT 22-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus strain K18-6-464
            SAMD00233528-rid16434743.denovo.277, whole genome shotgun sequence.
ACCESSION   DALPQQ010000269 DALPQQ010000000
VERSION     DALPQQ010000269.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMD00233528
            Sequence Read Archive: DRR236061
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 921)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 921)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001543423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001543423.1
            Genome Coverage       :: 77x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/22/2022 17:09:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,811
            CDSs (total)                      :: 2,743
            Genes (coding)                    :: 2,689
            CDSs (with protein)               :: 2,689
            Genes (RNA)                       :: 68
            rRNAs                             :: 2, 4, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 4, 2 (16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 54
            CDSs (without protein)            :: 54
            Pseudo Genes (ambiguous residues) :: 0 of 54
            Pseudo Genes (frameshifted)       :: 27 of 54
            Pseudo Genes (incomplete)         :: 27 of 54
            Pseudo Genes (internal stop)      :: 10 of 54
            Pseudo Genes (multiple problems)  :: 10 of 54
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..921
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMD00233528-rid16434743.denovo.277"
                     /strain="K18-6-464"
                     /db_xref="taxon:1280"
                     /geo_loc_name="Japan: Niigata"
     gene            complement(277..485)
                     /locus_tag="O7798_002711"
                     /pseudo
     CDS             complement(277..485)
                     /locus_tag="O7798_002711"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001561168.1"
                     /note="frameshifted; incomplete; partial in the middle of
                     a contig; missing N-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
BASE COUNT          308 a          121 c          139 g          353 t
ORIGIN      
        1 atctgcatga cctaatcgtt ttgaaatgta atgtttagct gttacttaaa gaaaatcaaa
       61 tattatatat acgcttgaaa aaataaaata ataatattat aatataatca atcggcatct
      121 acgtgcggat tataaagtaa agcgtagcat aaccaggagt tagtcgattt ttaataaatt
      181 cgactaaatt attaataaag gctaaagtaa ttagtttact ttagccttta ttgcatttgt
      241 aatttataga actgcgaaca ggtgactact gttaatttat gtgattaaag tttcaatgat
      301 atttgattta ttagaccatt tcaaaatcgc aaggttctca tgttctgcta cagtttgcgg
      361 tctttggaag atatatcatt tactattatt aacatgatat attctaattt gtttgtggat
      421 gggctgtttg gtttgatatc gcggtaaata taagcatcat tagttatatt gttgaaatct
      481 aagttgaatt tattatcata cagcaatgtg ccaattaggg acatttttaa ttttgaactc
      541 tacattttgt tgagagtatc tggttatatt tgcaaaatgg tatgaacatt tatcatcact
      601 tattaagttg tcttgatgat tgaatgaccc agtatttatt cagttcgaga agattgagag
      661 tgttaaatcg tattcgagta taatttcgat tctagtcata ccattttcat aaagtttagc
      721 catttgtaac ttaaactatg aactaaataa tcttctgact cttgtcaaaa taaaatcgcc
      781 tacccaaata gtttaacaat atctattctc atagaatttg ttcaactaag tgtagacgat
      841 tctgcattat caataaggct attcaatttg ctatcttaag ctgtttcgaa attttcaaat
      901 tcgtttcatt taatataaac a
//
LOCUS       DALPQQ010000270          919 bp    DNA     linear   BCT 22-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus strain K18-6-464
            SAMD00233528-rid16434743.denovo.278, whole genome shotgun sequence.
ACCESSION   DALPQQ010000270 DALPQQ010000000
VERSION     DALPQQ010000270.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMD00233528
            Sequence Read Archive: DRR236061
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 919)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 919)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001543423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001543423.1
            Genome Coverage       :: 77x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/22/2022 17:09:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,811
            CDSs (total)                      :: 2,743
            Genes (coding)                    :: 2,689
            CDSs (with protein)               :: 2,689
            Genes (RNA)                       :: 68
            rRNAs                             :: 2, 4, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 4, 2 (16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 54
            CDSs (without protein)            :: 54
            Pseudo Genes (ambiguous residues) :: 0 of 54
            Pseudo Genes (frameshifted)       :: 27 of 54
            Pseudo Genes (incomplete)         :: 27 of 54
            Pseudo Genes (internal stop)      :: 10 of 54
            Pseudo Genes (multiple problems)  :: 10 of 54
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..919
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMD00233528-rid16434743.denovo.278"
                     /strain="K18-6-464"
                     /db_xref="taxon:1280"
                     /geo_loc_name="Japan: Niigata"
     gene            complement(128..>919)
                     /locus_tag="O7798_002712"
     CDS             complement(128..>919)
                     /locus_tag="O7798_002712"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499574.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDC2864887.1"
                     /translation="ISYLITQIALYGRIDANEIESIDILSVNAFFIIMWLLGQMAIWN
                     FLFLRRALPLTKQELGEEEPELSRTSKGNVTNQTKIHLKQLQDKTTEYARKTRRSVDL
                     DKIRAKRDKFKKKVNDIIDIQEDDIPDWMRKPKWVKPMYVELFCGVVIFLFTFLEFNN
                     RNALFVSGDWKLSQTQYVIEWVTLLILLFIIIAYIATTLTFHLKGKFYYLQLFMGSIL
                     FFKLLTEFINIMIHGLLLSVFITPTLLLMLLAIIISYSLQLRERP"
BASE COUNT          325 a          150 c          120 g          324 t
ORIGIN      
        1 atctagttac aaaaaaagta ctatccataa acttcattga cctgtatcta agtaagttag
       61 agatatatct aacttatagc gtacacatca aaatgtttaa tagatagtac ttttataatg
      121 cttttaatta tggtcgctct cgtaattgta acgaataaga aatgatgatt gccaataaca
      181 ttaatagtaa tgttggcgta atgaacactg aaagtaatag tccatgaatc attatattta
      241 taaattccgt taacaattta aagaataaaa tgctccccat aaataattgt aaataataaa
      301 acttaccttt caagtggaaa gttaacgttg tagcgatata tgcgataata atgaataaca
      361 gaattaataa tgtaacccat tcaataacat attgtgtctg tgataatttc caatcaccag
      421 atacaaataa tgcattacga ttattaaatt ctaaaaatgt gaataaaaag atgacgacac
      481 cacaaaatag ttcgacatac attggtttaa cccatttcgg ttttctcatc caatcaggaa
      541 tatcgtcttc ttgaatatcg ataatatcat taactttctt tttgaattta tctcttttag
      601 ctctaatttt atctaaatcg acacttcttc ttgtcttacg tgcatattct gtagtcttat
      661 cttggagttg tttcaagtga attttagttt gattcgtgac attcccttta cttgttcttg
      721 ataattctgg ctcctcttca cctaattctt gctttgttaa aggtaaagct cggcgcaaga
      781 acaagaaatt ccaaatagcc atttgaccaa gtaaccacat aattataaag aaagcattga
      841 cacttaagat atcaattgac tctatttcat tagcatcaat tctgccatac aatgcaattt
      901 gtgtaattaa gtaacttat
//
LOCUS       DALPQQ010000271          897 bp    DNA     linear   BCT 22-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus strain K18-6-464
            SAMD00233528-rid16434743.denovo.279, whole genome shotgun sequence.
ACCESSION   DALPQQ010000271 DALPQQ010000000
VERSION     DALPQQ010000271.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMD00233528
            Sequence Read Archive: DRR236061
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 897)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 897)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001543423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001543423.1
            Genome Coverage       :: 77x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/22/2022 17:09:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,811
            CDSs (total)                      :: 2,743
            Genes (coding)                    :: 2,689
            CDSs (with protein)               :: 2,689
            Genes (RNA)                       :: 68
            rRNAs                             :: 2, 4, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 4, 2 (16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 54
            CDSs (without protein)            :: 54
            Pseudo Genes (ambiguous residues) :: 0 of 54
            Pseudo Genes (frameshifted)       :: 27 of 54
            Pseudo Genes (incomplete)         :: 27 of 54
            Pseudo Genes (internal stop)      :: 10 of 54
            Pseudo Genes (multiple problems)  :: 10 of 54
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..897
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMD00233528-rid16434743.denovo.279"
                     /strain="K18-6-464"
                     /db_xref="taxon:1280"
                     /geo_loc_name="Japan: Niigata"
     gene            <1..781
                     /locus_tag="O7798_002713"
     CDS             <1..781
                     /locus_tag="O7798_002713"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000791729.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="coagulase"
                     /protein_id="HDC2864888.1"
                     /translation="DEKQEEKNHKNMAQLKSDTEAAKSDESKRSKRSKRSLNTQNHKP
                     ASQEVSEQQKAEYDKRAEERKARFLDNQKIKKTPVVSLEYDFEHKQRIDNENDKKLVV
                     SAPTKKPTSPTTYTETTTQVPMPTVERQTQQQIIYNAPKQLAGLNGESHDFTTTHQSP
                     TTSNHTHNNVVEFEETSALPGRKSGSLVGISQIDSSHLTEREKRVIKREHVREAQKLV
                     DNYKDTHSYKDRINAQQKVNTLSEGHQKRFNKQINKVYNGK"
BASE COUNT          398 a          143 c          143 g          213 t
ORIGIN      
        1 agatgaaaaa caagaagaga aaaatcataa aaatatggct caattaaaat ctgacactga
       61 agcagcaaaa agtgatgaat caaaaagaag caagagaagt aaaagaagtt taaatactca
      121 aaatcacaaa cctgcatctc aagaagtttc tgaacaacaa aaagctgaat atgataaaag
      181 agcagaagaa agaaaagcga gatttttgga taatcaaaaa attaagaaaa cacctgtagt
      241 gtcattagaa tatgattttg agcataaaca acgtattgac aacgaaaacg acaagaaact
      301 tgtggtttct gcaccaacaa agaaaccaac atcaccgact acatatactg aaacaacgac
      361 acaggtacca atgcctacag ttgagcgtca aactcagcaa caaattattt ataatgcacc
      421 aaaacaattg gctggattaa atggtgaaag tcatgatttc acaacaacgc atcaatcacc
      481 aacaacttca aatcacacgc ataataatgt tgttgaattt gaagaaacgt ctgctttacc
      541 tggtagaaaa tcaggatcac tggttggtat aagtcaaatt gattcttctc atctaactga
      601 acgtgagaag cgtgtaatta agcgtgaaca cgttagagaa gctcaaaagt tagttgataa
      661 ttataaagat acacatagtt ataaagaccg aataaatgca caacaaaaag taaatacttt
      721 aagtgaaggt catcaaaaac gttttaataa acaaatcaat aaagtatata atggcaaata
      781 attaatgcat ggctgcaaag caaataatga gtttgtcgta aaaataacaa cattttaaac
      841 tagcaataaa taatatcaaa gtcatcattt caatgatgca atctagtata gtccaca
//
LOCUS       DALPQQ010000272          892 bp    DNA     linear   BCT 22-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus strain K18-6-464
            SAMD00233528-rid16434743.denovo.280, whole genome shotgun sequence.
ACCESSION   DALPQQ010000272 DALPQQ010000000
VERSION     DALPQQ010000272.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMD00233528
            Sequence Read Archive: DRR236061
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 892)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 892)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001543423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001543423.1
            Genome Coverage       :: 77x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/22/2022 17:09:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,811
            CDSs (total)                      :: 2,743
            Genes (coding)                    :: 2,689
            CDSs (with protein)               :: 2,689
            Genes (RNA)                       :: 68
            rRNAs                             :: 2, 4, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 4, 2 (16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 54
            CDSs (without protein)            :: 54
            Pseudo Genes (ambiguous residues) :: 0 of 54
            Pseudo Genes (frameshifted)       :: 27 of 54
            Pseudo Genes (incomplete)         :: 27 of 54
            Pseudo Genes (internal stop)      :: 10 of 54
            Pseudo Genes (multiple problems)  :: 10 of 54
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..892
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMD00233528-rid16434743.denovo.280"
                     /strain="K18-6-464"
                     /db_xref="taxon:1280"
                     /geo_loc_name="Japan: Niigata"
     gene            complement(208..315)
                     /locus_tag="O7798_002714"
     CDS             complement(208..315)
                     /locus_tag="O7798_002714"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499635.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDC2864889.1"
                     /translation="MVLLAFVTTIHDTDDGRFFNEHKHANNKLLKHSLI"
     gene            complement(352..675)
                     /gene="isdG"
                     /locus_tag="O7798_002715"
     CDS             complement(352..675)
                     /gene="isdG"
                     /locus_tag="O7798_002715"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499634.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="staphylobilin-forming heme oxygenase IsdG"
                     /protein_id="HDC2864890.1"
                     /translation="MKFMAENRLTLTKGTAKDIIERFYTRHGIETLEGFDGMFVTQTL
                     EQEDFDEVKILTVWKSKQAFTDWLKSDVFKAAHKHVRSKNEDESSPIINNKVITYDIG
                     YSYMK"
     gene            complement(694..>892)
                     /locus_tag="O7798_002716"
     CDS             complement(694..>892)
                     /locus_tag="O7798_002716"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499633.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="sortase"
                     /protein_id="HDC2864891.1"
                     /translation="NYIRTDFENDQDYQQFLDETKRKSVINSDVNVTVKDRIMTLSTC
                     EDAYSETTKRIVVVAKIIKVS"
BASE COUNT          284 a          157 c           88 g          363 t
ORIGIN      
        1 aatattaatc attaataaga tgaaaacatt tgattgtata gttaatatta attaatcgct
       61 tttatcactc ataatatttc aaattgtata aatttctttt atcgatacta ctactataaa
      121 tcatacgccc caaaatatca ttattaattc ttttcttctt caaaataaat caaaatgata
      181 taattgatga ttattttcaa agcacattca aatcaaacta tgttttagca atttgttgtt
      241 agcatgtttg tgttcattaa aaaaacgacc atcatcggta tcatgtatgg tcgttacaaa
      301 agctaacaat accaattgtc ataacaagta ctgcaacctc tttaaattca attatttcat
      361 gtaactatag cctatatcat atgtaattac tttgttattt ataatcgggc tactttcatc
      421 ttcattttta cttctaacat gtttatgcgc tgctttaaag acatcagatt ttaaccaatc
      481 cgtaaaagct tgctttgatt tccaaactgt taaaattttc acttcatcaa aatcttcttg
      541 ttctaaagtt tgtgtaacaa acatgccatc aaagccttct aatgtttcaa tcccatgtct
      601 cgtgtaaaat cgttctataa tatcttttgc tgttcctttt gttaacgtca gcctattttc
      661 tgccataaat ttcataatta tcctcttttc tgtttaactt accttaatta tttttgcgac
      721 aacaacaatt cttttcgtcg tttcactata tgcatcttcg cacgttgata aagtcattat
      781 tctatctttt accgttacat taacatctga attaattaca gatttacgtt ttgtctcatc
      841 taaaaattgt tgataatctt gatcattttc aaaatctgta cgtatgtaat ta
//
LOCUS       DALPQQ010000273          892 bp    DNA     linear   BCT 22-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus strain K18-6-464
            SAMD00233528-rid16434743.denovo.281, whole genome shotgun sequence.
ACCESSION   DALPQQ010000273 DALPQQ010000000
VERSION     DALPQQ010000273.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMD00233528
            Sequence Read Archive: DRR236061
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 892)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 892)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001543423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001543423.1
            Genome Coverage       :: 77x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/22/2022 17:09:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,811
            CDSs (total)                      :: 2,743
            Genes (coding)                    :: 2,689
            CDSs (with protein)               :: 2,689
            Genes (RNA)                       :: 68
            rRNAs                             :: 2, 4, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 4, 2 (16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 54
            CDSs (without protein)            :: 54
            Pseudo Genes (ambiguous residues) :: 0 of 54
            Pseudo Genes (frameshifted)       :: 27 of 54
            Pseudo Genes (incomplete)         :: 27 of 54
            Pseudo Genes (internal stop)      :: 10 of 54
            Pseudo Genes (multiple problems)  :: 10 of 54
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..892
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMD00233528-rid16434743.denovo.281"
                     /strain="K18-6-464"
                     /db_xref="taxon:1280"
                     /geo_loc_name="Japan: Niigata"
     gene            complement(20..108)
                     /locus_tag="O7798_002717"
     tRNA            complement(20..108)
                     /locus_tag="O7798_002717"
                     /product="tRNA-Ser"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(71..73),aa:Ser,seq:gct)
     gene            complement(111..185)
                     /locus_tag="O7798_002718"
     tRNA            complement(111..185)
                     /locus_tag="O7798_002718"
                     /product="tRNA-Asn"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(151..153),aa:Asn,seq:gtt)
     gene            complement(327..>892)
                     /locus_tag="O7798_002719"
     CDS             complement(327..>892)
                     /locus_tag="O7798_002719"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001619687.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="competence protein ComK"
                     /protein_id="HDC2864892.1"
                     /translation="SQNIYVIRKGDMVIRPAFDDDDQRNGSEIIRFDKTRIQNPFKVQ
                     KIIERSCKFYGNTYLGKKAETNRITGISSKPPILLTPLFPTYFFPTHSDRQNENIWLN
                     MHYIESIKELKNRKCKVTFINNESIILHVSYHSLWHQYNNSIFYYYMVDKQSRMISKN
                     PDQPIDYNKATLNVFEALTRYSLFEDK"
BASE COUNT          288 a          148 c          151 g          305 t
ORIGIN      
        1 ataccatttt agcaagtaac ggaaacggag ggattcgaac cctcgcgccg ctttcgcgac
       61 ctacaccctt agcaggggcg cctcttcagc caacttgagt acgtttccaa tggctccaca
      121 ggtaggactc gaacctacga ccgatcggtt aacagccgat agctctacca ctgagctact
      181 gtggattaat ttgtatgtgt ttgaatatca agcacaaata ttattataac aagattaagt
      241 taatttgcaa tagatacctt aaaaaaatat gcagaacatt tacactatat ttataaaaca
      301 ttccgcatat tttaaaaata aacaatttat ttatcttcaa ataaagaata gcgtgtcaat
      361 gcttcaaaca cattcaatgt ggctttatta taatctattg gttggtcggg attttttgat
      421 atcatgcgag attgtttatc taccatgtaa tagtaaaaaa tggaattgtt atattgatgc
      481 cataaactgt ggtatgaaac atgaagaatg attgattcat tattaataaa tgtcacttta
      541 catttacgat tttttaattc tttaatactt tcgatataat gcatatttaa ccaaatattt
      601 tcattttgtc tgtcagaatg tgttgggaaa aaataagttg gaaataatgg tgttagtaaa
      661 ataggtggtt tactagaaat gccagtaatg cggtttgtct ctgctttctt gccaagataa
      721 gtattaccat aaaatttgca agagcgttca atgattttct ggactttaaa aggattttga
      781 atacgcgttt tgtcaaaccg aattatttca ctaccgtttc tttgatcgtc atcatcaaat
      841 gctggtcgaa taaccatgtc tcctttgcgt atcacataaa tattttgaga at
//
LOCUS       DALPQQ010000274          886 bp    DNA     linear   BCT 22-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus strain K18-6-464
            SAMD00233528-rid16434743.denovo.282, whole genome shotgun sequence.
ACCESSION   DALPQQ010000274 DALPQQ010000000
VERSION     DALPQQ010000274.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMD00233528
            Sequence Read Archive: DRR236061
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 886)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 886)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001543423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001543423.1
            Genome Coverage       :: 77x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/22/2022 17:09:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,811
            CDSs (total)                      :: 2,743
            Genes (coding)                    :: 2,689
            CDSs (with protein)               :: 2,689
            Genes (RNA)                       :: 68
            rRNAs                             :: 2, 4, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 4, 2 (16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 54
            CDSs (without protein)            :: 54
            Pseudo Genes (ambiguous residues) :: 0 of 54
            Pseudo Genes (frameshifted)       :: 27 of 54
            Pseudo Genes (incomplete)         :: 27 of 54
            Pseudo Genes (internal stop)      :: 10 of 54
            Pseudo Genes (multiple problems)  :: 10 of 54
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..886
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMD00233528-rid16434743.denovo.282"
                     /strain="K18-6-464"
                     /db_xref="taxon:1280"
                     /geo_loc_name="Japan: Niigata"
     gene            <1..145
                     /locus_tag="O7798_002720"
     CDS             <1..145
                     /locus_tag="O7798_002720"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498667.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="PLP-dependent aminotransferase family protein"
                     /protein_id="HDC2864893.1"
                     /translation="LSKEKILINPGYIYGSKEKSIRLSFAFESNENIKHALYKIYTYV
                     KKV"
     gene            335..808
                     /locus_tag="O7798_002721"
     CDS             335..808
                     /locus_tag="O7798_002721"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498668.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1648 domain-containing protein"
                     /protein_id="HDC2864894.1"
                     /translation="MSKIRSFTILSLLIYLAMMCYTVVTYPKLPTKVPIHYNLAGDAD
                     NFADKWVLLLINSAFIVIWLIFFIAGRYYERFAKWSHYNHTPREIRAIKLFLSTLNLE
                     IMSYMSIFTVLEIWQIQHHHQFNLLWFNMIFIIIIGLTLVIFCLLPTIHKMRDSQ"
BASE COUNT          322 a          116 c          139 g          309 t
ORIGIN      
        1 gttaagtaaa gaaaaaatat taatcaatcc gggttacatt tatggcagta aagaaaagag
       61 tataaggcta tcttttgcct ttgaatcaaa tgaaaatatt aagcatgcgc tctataaaat
      121 ttatacatat gtgaaaaagg tttaattaaa acaataattc gaatcattat gtggcatgtt
      181 aaacagctaa atataagcta tgcacattta acaagcggat actcctgacg caattatagt
      241 atcattacat attgtttaat cgtttggggt aatgtaatta aaaggtaaaa taggcagagt
      301 gttatacata aaatgtaaag aaagaggcga tagaatgtct aaaatcaggt cttttacaat
      361 attaagtcta cttatttact tagctatgat gtgctataca gtagtgacct atccaaaatt
      421 accaaccaaa gtgcctattc attataattt agcaggggat gctgataatt ttgctgataa
      481 atgggtgctg cttttgatta atagcgcatt tatagtgatt tggcttatat ttttcattgc
      541 aggtagatac tatgaacgat ttgccaaatg gtcacattat aatcatacac cacgtgaaat
      601 tcgagcgatt aaattatttt taagtacgtt aaatttagag attatgagct atatgtctat
      661 cttcacagta ttagaaattt ggcaaataca acaccatcat caattcaatt tactatggtt
      721 taatatgata tttatcatta tcattggttt gacgcttgtc atattttgtt tacttcctac
      781 aattcataaa atgagagatt ctcaataaaa atataaactc tcatgatgca gttttgaagc
      841 gaattcctga gattattata aataatatct agtatttata attaaa
//
LOCUS       DALPQQ010000275          870 bp    DNA     linear   BCT 22-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus strain K18-6-464
            SAMD00233528-rid16434743.denovo.283, whole genome shotgun sequence.
ACCESSION   DALPQQ010000275 DALPQQ010000000
VERSION     DALPQQ010000275.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMD00233528
            Sequence Read Archive: DRR236061
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 870)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 870)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001543423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001543423.1
            Genome Coverage       :: 77x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/22/2022 17:09:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,811
            CDSs (total)                      :: 2,743
            Genes (coding)                    :: 2,689
            CDSs (with protein)               :: 2,689
            Genes (RNA)                       :: 68
            rRNAs                             :: 2, 4, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 4, 2 (16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 54
            CDSs (without protein)            :: 54
            Pseudo Genes (ambiguous residues) :: 0 of 54
            Pseudo Genes (frameshifted)       :: 27 of 54
            Pseudo Genes (incomplete)         :: 27 of 54
            Pseudo Genes (internal stop)      :: 10 of 54
            Pseudo Genes (multiple problems)  :: 10 of 54
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..870
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMD00233528-rid16434743.denovo.283"
                     /strain="K18-6-464"
                     /db_xref="taxon:1280"
                     /geo_loc_name="Japan: Niigata"
     gene            118..>870
                     /locus_tag="O7798_002722"
     CDS             118..>870
                     /locus_tag="O7798_002722"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000803170.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HDC2864895.1"
                     /translation="MKPLHLKLNNFGPFLKEEIDFSKIDNNELFLISGKTGSGKTMIF
                     DAMTYALFGKASTEQREENDLRSHFADGKQPMSVTFEFQLNHRIYKVHRQGPYIKEGN
                     TTKTNAKFDVFEMVDGKYEIRESKVISGTQFIIELLGVNADQFRQLFILPQGEFKRFL
                     ISNSREKQGILRTLFDSEKFEAIREILKEEVKKEKAQIENRYQQIDLLWQEIESFDDD
                     NIKGLLEVATQQIDKLIENIPLLQARSKEILAS"
BASE COUNT          359 a          104 c          154 g          253 t
ORIGIN      
        1 gacatgtcaa ttatcgaaat gttttataaa catataactg ataaagaatt atcggatatc
       61 caatctaaaa agataaaaaa tattttagaa aacgaattga gaaaggagga ttaatgaatg
      121 aaaccattac atttaaagtt gaataatttc ggcccctttt taaaagaaga aattgatttt
      181 tctaaaattg ataataatga attgttttta ataagtggta agactggatc gggtaaaaca
      241 atgatttttg atgcaatgac ttatgccttg tttggtaaag catcaactga acaaagagaa
      301 gaaaatgatt tgagaagtca tttcgctgat ggtaaacagc cgatgtcagt aacatttgaa
      361 tttcaattaa atcatcgaat ttataaagtg catagacaag gcccttatat caaagaaggt
      421 aatacaacaa aaacgaacgc taaatttgat gtatttgaga tggtggatgg caagtatgaa
      481 attagagaaa gtaaagtaat ttcaggtacc caattcatta ttgaattatt aggagtaaat
      541 gcagatcaat tccgacaatt gtttattttg cctcaaggtg aattcaaacg ctttttaata
      601 tcaaacagtc gtgaaaagca agggatatta agaacactgt ttgacagtga aaaatttgaa
      661 gctatacgag aaatattaaa agaagaagta aaaaaagaaa aagctcaaat cgagaataga
      721 tatcaacaaa ttgacctttt atggcaagaa attgaatcat ttgatgatga caatataaaa
      781 ggcttattag aggttgccac tcaacagata gacaaattga ttgaaaatat accactttta
      841 caagctaggt cgaaagaaat actagcatct
//
LOCUS       DALPQQ010000276          855 bp    DNA     linear   BCT 22-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus strain K18-6-464
            SAMD00233528-rid16434743.denovo.284, whole genome shotgun sequence.
ACCESSION   DALPQQ010000276 DALPQQ010000000
VERSION     DALPQQ010000276.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMD00233528
            Sequence Read Archive: DRR236061
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 855)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 855)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001543423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001543423.1
            Genome Coverage       :: 77x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/22/2022 17:09:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,811
            CDSs (total)                      :: 2,743
            Genes (coding)                    :: 2,689
            CDSs (with protein)               :: 2,689
            Genes (RNA)                       :: 68
            rRNAs                             :: 2, 4, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 4, 2 (16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 54
            CDSs (without protein)            :: 54
            Pseudo Genes (ambiguous residues) :: 0 of 54
            Pseudo Genes (frameshifted)       :: 27 of 54
            Pseudo Genes (incomplete)         :: 27 of 54
            Pseudo Genes (internal stop)      :: 10 of 54
            Pseudo Genes (multiple problems)  :: 10 of 54
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..855
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMD00233528-rid16434743.denovo.284"
                     /strain="K18-6-464"
                     /db_xref="taxon:1280"
                     /geo_loc_name="Japan: Niigata"
     gene            16..699
                     /locus_tag="O7798_002723"
     CDS             16..699
                     /locus_tag="O7798_002723"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498863.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF5079 family protein"
                     /protein_id="HDC2864896.1"
                     /translation="MTTKENIDTLRKPGAQALSLISLFLILFSCLTFFFGLDYERFPN
                     YLKITTIIELIIIVISLLQWIRFIDFEKESAQKYKKIYARFLVVINVLTTITVVFALC
                     NLYYFAAVQNHYDLFNYWLMGSISIIISYLLLVIGGMFTLLKLPKVTKRWGGKTKTHF
                     GLLLTALSSFIYIEKIIEYILVPNVVESKFIIIVSMLVIAGAQFVAFQFIMQYSRFYI
                     FELNTEDDD"
BASE COUNT          298 a           90 c          137 g          330 t
ORIGIN      
        1 gtataggaga tagatatgac tactaaagaa aatattgata ctcttcgaaa gccaggcgca
       61 caagccttaa gtttaatatc attgtttttg atactttttt catgtttgac tttctttttt
      121 ggtttagatt atgaaaggtt tccaaattat ttaaagataa cgacaattat agaattaata
      181 attattgtaa ttagtttact tcaatggatt agatttatag atttcgaaaa agaaagtgca
      241 cagaaatata aaaaaatata tgctcgattt ttagttgtta taaatgtgtt aactactatc
      301 actgtagtat ttgcactgtg taatctttat tattttgcag ctgtacaaaa ccattatgat
      361 ttatttaatt attggttgat gggttcgatt tcaatcataa ttagctattt attattagta
      421 attggcggaa tgttcacgtt attaaaatta cctaaagtaa caaaacgttg gggtggtaaa
      481 actaaaacac atttcggttt attattaact gcgttgagct catttatata tattgaaaaa
      541 attatcgaat atatattggt tcctaatgtc gtagaatcta agtttataat tattgtgagc
      601 atgttggtta tcgctggagc acaatttgtg gcatttcaat ttattatgca atacagtaga
      661 ttctatattt ttgaattaaa cactgaagat gatgactaaa taattttata aaatactgtt
      721 ggagtatact taaataagaa aatcaacttc aacgtatatc accatattat tttatactca
      781 atgatgtgaa agaatttgag tggattgata ttaatgggat ttgattatta gaattagaaa
      841 aggaacgttt gcttt
//
LOCUS       DALPQQ010000277          829 bp    DNA     linear   BCT 22-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus strain K18-6-464
            SAMD00233528-rid16434743.denovo.285, whole genome shotgun sequence.
ACCESSION   DALPQQ010000277 DALPQQ010000000
VERSION     DALPQQ010000277.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMD00233528
            Sequence Read Archive: DRR236061
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 829)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 829)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001543423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001543423.1
            Genome Coverage       :: 77x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/22/2022 17:09:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,811
            CDSs (total)                      :: 2,743
            Genes (coding)                    :: 2,689
            CDSs (with protein)               :: 2,689
            Genes (RNA)                       :: 68
            rRNAs                             :: 2, 4, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 4, 2 (16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 54
            CDSs (without protein)            :: 54
            Pseudo Genes (ambiguous residues) :: 0 of 54
            Pseudo Genes (frameshifted)       :: 27 of 54
            Pseudo Genes (incomplete)         :: 27 of 54
            Pseudo Genes (internal stop)      :: 10 of 54
            Pseudo Genes (multiple problems)  :: 10 of 54
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..829
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMD00233528-rid16434743.denovo.285"
                     /strain="K18-6-464"
                     /db_xref="taxon:1280"
                     /geo_loc_name="Japan: Niigata"
     gene            <1..190
                     /locus_tag="O7798_002724"
     CDS             <1..190
                     /locus_tag="O7798_002724"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001836194.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="DUF443 family protein"
                     /protein_id="HDC2864897.1"
                     /translation="SFIVFTYLLLGGCSILFLIWLMTIKPQNLLVFIMWIIITIFFFL
                     ISMGSISNKKVYAKLKKQ"
     gene            316..>829
                     /locus_tag="O7798_002725"
     CDS             316..>829
                     /locus_tag="O7798_002725"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499153.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF443 family protein"
                     /protein_id="HDC2864898.1"
                     /translation="MEILLCEVRVVNKNPRYRIIKYKNDYLMIDLVSTWLVLFFPFIN
                     WLIPKKYVQISREDFDNLNIVKPVKNKALWPAIGSILLFGTMFRDKIYIPDSHLEKNC
                     VIIICSVLLLSILVFYIYLNQKVKLSIYNNRSSNGKIMIFPSFKNLCFVLFSYFFCGG
                     LSIMFLDVLIS"
BASE COUNT          298 a           90 c          124 g          317 t
ORIGIN      
        1 aagttttata gttttcacat atctattatt aggaggttgt tctatattat ttttaatatg
       61 gctaatgact ataaaacctc aaaatctact ggtatttatt atgtggatta ttattacaat
      121 ttttttcttt ctaataagca tgggctcaat tagtaataaa aaggtttatg ccaaacttaa
      181 aaagcaatag aaattactaa acttagattg tagttcgtaa gttaagtaat aaacaggaaa
      241 atagtatgtt actaaaatac aaaacactta taaagtatct gaaagtgtat tagatataaa
      301 accaacgaga cggaagtgga gatattgctt tgcgaggtta gagttgtaaa caaaaatccc
      361 agatatagaa ttattaaata taaaaacgac tatctgatga ttgatttagt aagcacctgg
      421 ttagttttgt tctttccgtt tattaattgg ttaataccaa aaaaatatgt ccaaatcagc
      481 agagaagatt ttgataattt aaatattgtc aaaccagtta aaaataaagc tttatggcca
      541 gctataggta gcatactttt atttggcact atgtttagag ataaaatata tatacctgat
      601 tctcatttag aaaaaaattg cgttattatc atttgttcgg ttttattatt aagtattcta
      661 gtgttttata tatatttaaa tcagaaagta aagttatcta tctataataa tcggagtagc
      721 aatggaaaaa ttatgatttt tccatcattc aagaatcttt gctttgtact attttcttat
      781 tttttctgtg gtggattatc aataatgttc ttagatgttt tgattagtt
//
LOCUS       DALPQQ010000278          802 bp    DNA     linear   BCT 22-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus strain K18-6-464
            SAMD00233528-rid16434743.denovo.286, whole genome shotgun sequence.
ACCESSION   DALPQQ010000278 DALPQQ010000000
VERSION     DALPQQ010000278.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMD00233528
            Sequence Read Archive: DRR236061
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 802)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 802)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001543423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001543423.1
            Genome Coverage       :: 77x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/22/2022 17:09:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,811
            CDSs (total)                      :: 2,743
            Genes (coding)                    :: 2,689
            CDSs (with protein)               :: 2,689
            Genes (RNA)                       :: 68
            rRNAs                             :: 2, 4, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 4, 2 (16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 54
            CDSs (without protein)            :: 54
            Pseudo Genes (ambiguous residues) :: 0 of 54
            Pseudo Genes (frameshifted)       :: 27 of 54
            Pseudo Genes (incomplete)         :: 27 of 54
            Pseudo Genes (internal stop)      :: 10 of 54
            Pseudo Genes (multiple problems)  :: 10 of 54
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..802
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMD00233528-rid16434743.denovo.286"
                     /strain="K18-6-464"
                     /db_xref="taxon:1280"
                     /geo_loc_name="Japan: Niigata"
     gene            complement(470..>802)
                     /locus_tag="O7798_002726"
     CDS             complement(470..>802)
                     /locus_tag="O7798_002726"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500445.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BsaG protein"
                     /protein_id="HDC2864899.1"
                     /translation="ITLMFIGVSLFFNVIILLLLFIFSIFIKDVMAIVVGVLMFIFNV
                     YFGLEVLGDHSWFYLPITYATRYVYMFIEGSIPVTLTLAIYIIITLLLAVLLFKGFNK
                     WSGRTIKD"
BASE COUNT          306 a          154 c           83 g          259 t
ORIGIN      
        1 taaactcaaa tttccttaat tcataaaaca ttaataacta accctttctt acaaaccacc
       61 tagcccataa tatattaaaa cgtcattttt atttcaatta gcggaaaata aaaaaaccat
      121 tccgcattaa ctttggcaag ttggaatggt taaaaaaata ttttagaagc cagcgtttgg
      181 cttgcttaga cgacatgttc gcgcatgtcg tcttattttt acatttatat aataacacgc
      241 aattcaataa aatgtctaat caataaacct caattacatt caaattcaaa aacttttcac
      301 ctaatattca tcgcttaaat aaacattacg tttaattaaa cagacattgt caatcgcgtc
      361 taatacccct gctgtccgaa aacaaaatta ttttgtattc atatttaact gttctctttc
      421 ctcccttttc aacgcaacta aatttctttt accgttagag ccccaatctt taatctttaa
      481 ttgttctacc gctccattta ttaaatcctt taaagagtaa aactgctaat agcaacgtga
      541 taataatata gattgccaat gttaatgtaa ctggtatact cccttcgata aacatataaa
      601 cgtaacgtgt agcatatgtg attggtaaat agaaccacga atgatctcca agcacttcta
      661 atccaaaata aacgttaaaa ataaacatta aaactccgac aacaatagcc attacatctt
      721 taatgaaaat actaaaaata aaaagtagca gtaatataat tacattgaaa aacaatgata
      781 cgcctataaa cataagtgtt at
//
LOCUS       DALPQQ010000279          780 bp    DNA     linear   BCT 22-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus strain K18-6-464
            SAMD00233528-rid16434743.denovo.287, whole genome shotgun sequence.
ACCESSION   DALPQQ010000279 DALPQQ010000000
VERSION     DALPQQ010000279.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMD00233528
            Sequence Read Archive: DRR236061
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 780)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 780)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001543423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001543423.1
            Genome Coverage       :: 77x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/22/2022 17:09:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,811
            CDSs (total)                      :: 2,743
            Genes (coding)                    :: 2,689
            CDSs (with protein)               :: 2,689
            Genes (RNA)                       :: 68
            rRNAs                             :: 2, 4, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 4, 2 (16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 54
            CDSs (without protein)            :: 54
            Pseudo Genes (ambiguous residues) :: 0 of 54
            Pseudo Genes (frameshifted)       :: 27 of 54
            Pseudo Genes (incomplete)         :: 27 of 54
            Pseudo Genes (internal stop)      :: 10 of 54
            Pseudo Genes (multiple problems)  :: 10 of 54
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..780
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMD00233528-rid16434743.denovo.287"
                     /strain="K18-6-464"
                     /db_xref="taxon:1280"
                     /geo_loc_name="Japan: Niigata"
     gene            88..615
                     /gene="isaB"
                     /locus_tag="O7798_002727"
     CDS             88..615
                     /gene="isaB"
                     /locus_tag="O7798_002727"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501423.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="immunodominant staphylococcal antigen IsaB"
                     /protein_id="HDC2864900.1"
                     /translation="MNKTSKVCVAATLALGTLIGVTVVENSAPTSKQAQAAITPYYTY
                     NGYIGNNANFILDKNFINAIKYDNVKFNGIKLAKTNTIKKVEKYDQTFKGVSAKGNEA
                     SQLQFVVKNNISLKDIQKAYGKDLKKENGKTKEADSGIFYYQNAKKTLGIWFVVDHNR
                     VVEVTVGHTPYKTSK"
BASE COUNT          314 a           84 c          139 g          243 t
ORIGIN      
        1 aaatataatc attagtattt ttatggctga aaaagttata ataaaagtgt aaggaataaa
       61 atatttgtat ggaaaagaga gataattatg aataaaacca gtaaagtttg tgtagcagca
      121 acattagcat tgggcacact gattggagta acagttgttg aaaattcggc gccaacaagt
      181 aaacaggcac aggcagcaat aaccccatat tatacttata atggttatat tggtaataat
      241 gctaatttta ttctggataa gaattttatt aacgcgatta agtatgataa tgtgaaattc
      301 aatggtatta aattagctaa aacgaatacg ataaaaaaag tagagaaata tgatcaaact
      361 tttaaaggtg tttctgcaaa aggaaacgaa gcaagtcaat tgcaatttgt agttaaaaat
      421 aatatttcat taaaagatat ccaaaaagct tatggcaagg acttgaaaaa agaaaatggt
      481 aaaacaaagg aagctgatag cggtattttt tactatcaaa atgctaaaaa gacattaggc
      541 atctggtttg tcgttgatca taatagagtt gtcgaagtaa cagttggaca tacaccatac
      601 aaaacaagta aataaaataa tggcatatta aggctagagt gtgaggagtg ataccgcatt
      661 ctagtctttt ttattaaata ataacgatta ttgcgtctta catagttgtt tgaaattgat
      721 aaaaatgttt atttgattat gattatttaa atagttatct cacatatttc aagcattgat
//
LOCUS       DALPQQ010000280          776 bp    DNA     linear   BCT 22-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus strain K18-6-464
            SAMD00233528-rid16434743.denovo.288, whole genome shotgun sequence.
ACCESSION   DALPQQ010000280 DALPQQ010000000
VERSION     DALPQQ010000280.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMD00233528
            Sequence Read Archive: DRR236061
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 776)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 776)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001543423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001543423.1
            Genome Coverage       :: 77x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/22/2022 17:09:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,811
            CDSs (total)                      :: 2,743
            Genes (coding)                    :: 2,689
            CDSs (with protein)               :: 2,689
            Genes (RNA)                       :: 68
            rRNAs                             :: 2, 4, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 4, 2 (16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 54
            CDSs (without protein)            :: 54
            Pseudo Genes (ambiguous residues) :: 0 of 54
            Pseudo Genes (frameshifted)       :: 27 of 54
            Pseudo Genes (incomplete)         :: 27 of 54
            Pseudo Genes (internal stop)      :: 10 of 54
            Pseudo Genes (multiple problems)  :: 10 of 54
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..776
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMD00233528-rid16434743.denovo.288"
                     /strain="K18-6-464"
                     /db_xref="taxon:1280"
                     /geo_loc_name="Japan: Niigata"
     gene            <1..131
                     /locus_tag="O7798_002728"
     CDS             <1..131
                     /locus_tag="O7798_002728"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501488.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HDC2864901.1"
                     /translation="IVFYNQENIFYISNAVIDIISVSKDTLDYIKSEFNDHCASPY"
     gene            complement(191..691)
                     /locus_tag="O7798_002729"
                     /pseudo
     CDS             complement(191..691)
                     /locus_tag="O7798_002729"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014532440.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS30 family transposase"
BASE COUNT          251 a          131 c          127 g          267 t
ORIGIN      
        1 ttattgtatt ctataatcaa gaaaatatat tctacattag caatgctgtt atagatatca
       61 tcagtgtatc caaagatact cttgattata taaagtcaga attcaatgat cactgtgctt
      121 cgccatactg attttatagc acagagaaaa gccgtagttt cgaagagacc aacggctttt
      181 ttataaatct ttagattgtc aaattaagct ggacaagttt atcatcttcg atgaaactca
      241 taaatacttc caatggtgtt ctataaccta aagattttct aggacgatga ttgatttttt
      301 gagcaacact gatgatatga tcgtctgtta ctaaattgaa atctagttct ttatctaatc
      361 cactgcgtct aagtattccg ttagaatgtt catttaaacc tcgctgtgat ggcgtgcctg
      421 gatcagcaaa aaatatagat atatcgtgac agttacataa tgttttccag tttgagaact
      481 ccttaccaca atcaaaagta attgatttaa atatatgaga aggtaaagat gaaaacattg
      541 agtgtagagc gttttctata tcagttgcct tacgacctaa gggtcgtaag gtgataatca
      601 tcttggatac tctttctacc aaagtaatga ttgcactacc atgacgacga ccaacaatag
      661 tatctccttc aagatgtcca aactccttat gttttctttg gtaggaaata catattgagt
      721 ttagcacata aggcttattt atttaccttt ttcttcacga cgttttaaat aatagg
//
LOCUS       DALPQQ010000281          769 bp    DNA     linear   BCT 22-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus strain K18-6-464
            SAMD00233528-rid16434743.denovo.289, whole genome shotgun sequence.
ACCESSION   DALPQQ010000281 DALPQQ010000000
VERSION     DALPQQ010000281.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMD00233528
            Sequence Read Archive: DRR236061
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 769)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 769)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001543423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001543423.1
            Genome Coverage       :: 77x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/22/2022 17:09:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,811
            CDSs (total)                      :: 2,743
            Genes (coding)                    :: 2,689
            CDSs (with protein)               :: 2,689
            Genes (RNA)                       :: 68
            rRNAs                             :: 2, 4, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 4, 2 (16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 54
            CDSs (without protein)            :: 54
            Pseudo Genes (ambiguous residues) :: 0 of 54
            Pseudo Genes (frameshifted)       :: 27 of 54
            Pseudo Genes (incomplete)         :: 27 of 54
            Pseudo Genes (internal stop)      :: 10 of 54
            Pseudo Genes (multiple problems)  :: 10 of 54
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..769
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMD00233528-rid16434743.denovo.289"
                     /strain="K18-6-464"
                     /db_xref="taxon:1280"
                     /geo_loc_name="Japan: Niigata"
     gene            complement(1..250)
                     /locus_tag="O7798_002730"
                     /pseudo
     CDS             complement(1..250)
                     /locus_tag="O7798_002730"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500432.1"
                     /note="frameshifted; incomplete; missing C-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="SMEK domain-containing protein"
BASE COUNT          240 a          101 c           95 g          333 t
ORIGIN      
        1 tttttacacg ttgcggtaac ttgaataata attttattcg tattatctat aagatcaaat
       61 gctggtgcat tttttgtttt ttattatgat tctcaagtga atacccatat acaatattta
      121 acaggtctct aaaaaaatat tcggaatata tatgattatt taaaatattt atctttccta
      181 gttcttcaat cttagtatta agtctaatta gtgtatcaag aaatttttct tgattcgttg
      241 atcgtttcaa gttttaagtc tccttttaaa atgaatattt cacttcttat aactaatatt
      301 taaacaaaat gatcacataa taatatttaa tttacaatat gccactacag tgtcaacatt
      361 ttataaacac tattcatttg aacatggtct aaaacgaata ggacattgta aatgattaaa
      421 tagtctgtct ctagttgatg tatatggtca tttgttatgc agataataat taatctaatt
      481 aatttttacg ttttagttac ttggttgtga ttgaggcttt ttgtatctag ttgtaatatt
      541 ctcctttttt agaatcataa taggtacttc ttgaaatttt tagaactttg cacattgctg
      601 atactgaata ttgatacgca ttttgttgaa agacttcatt ttttgtctca aaattagcac
      661 tgcttgcttt aaatcatcat tttacattat caatcgatgt ttttctttgc gtaattttat
      721 taactctttt tcatcacttg ttaaaatgtc ttgatgattg aatgactca
//
LOCUS       DALPQQ010000282          767 bp    DNA     linear   BCT 22-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus strain K18-6-464
            SAMD00233528-rid16434743.denovo.290, whole genome shotgun sequence.
ACCESSION   DALPQQ010000282 DALPQQ010000000
VERSION     DALPQQ010000282.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMD00233528
            Sequence Read Archive: DRR236061
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 767)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 767)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001543423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001543423.1
            Genome Coverage       :: 77x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/22/2022 17:09:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,811
            CDSs (total)                      :: 2,743
            Genes (coding)                    :: 2,689
            CDSs (with protein)               :: 2,689
            Genes (RNA)                       :: 68
            rRNAs                             :: 2, 4, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 4, 2 (16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 54
            CDSs (without protein)            :: 54
            Pseudo Genes (ambiguous residues) :: 0 of 54
            Pseudo Genes (frameshifted)       :: 27 of 54
            Pseudo Genes (incomplete)         :: 27 of 54
            Pseudo Genes (internal stop)      :: 10 of 54
            Pseudo Genes (multiple problems)  :: 10 of 54
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..767
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMD00233528-rid16434743.denovo.290"
                     /strain="K18-6-464"
                     /db_xref="taxon:1280"
                     /geo_loc_name="Japan: Niigata"
     gene            complement(<1..329)
                     /locus_tag="O7798_002731"
     CDS             complement(<1..329)
                     /locus_tag="O7798_002731"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501488.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HDC2864902.1"
                     /translation="MIINLETQQIHFDLEHEIPYFQAPEKNRIRLDIDVLNKKQISNI
                     INVIFNNQSKTKCTFLSEYLYPVKFREKTRIGRFFNITNWYEEIHSTDEKYVIATIKN
                     IKNKDLI"
     gene            complement(331..417)
                     /locus_tag="O7798_002732"
                     /pseudo
     CDS             complement(331..417)
                     /locus_tag="O7798_002732"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000790915.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            432..758
                     /locus_tag="O7798_002733"
                     /pseudo
     CDS             432..758
                     /locus_tag="O7798_002733"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012656145.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS30 family transposase"
BASE COUNT          251 a          114 c          107 g          295 t
ORIGIN      
        1 tcaattaagt ctttgttttt tatattttta atagttgcaa taacatactt ctcatcggta
       61 gaatggattt cttcgtacca gttagtaata ttaaaaaaac gaccaattct tgttttttct
      121 ctaaatttaa caggatataa gtattcagac aaaaatgtac atttcgtctt tgattggtta
      181 ttaaatataa cattaataat attagaaatt tgctttttat tgagaacatc aatatctaag
      241 cgtatcctat ttttctcagg tgcttgaaaa tagggaattt catgttctaa atcaaaatgt
      301 atttgttgtg tttcaaggtt aataatcatt ttaatctcca attcttttta ggttagcatc
      361 gtatgtacca cttcttgttt tcttgctacc taaattctta atactgcttg caccttttca
      421 ttttatcttc tcatatattt aaatcaatta cttttgattg tggtaaggag ttctcaaact
      481 ggaaaacaat atgtaactgt cacgatatat ctatattttt tgctgatcca ggcacgccat
      541 cacagcgagg tttaaatgaa cattctaacg gaataattag acgcagtgga ttagataaag
      601 aactagattt caatttagta acggatgatc atatcatcag tgttgctcaa aaaatcaatc
      661 atcatcctag aaaatcttta ggttatagaa caccattgga agtatttatg agtttcatcg
      721 aagatgataa acttgtccag cttaatttga caatctaaag atttata
//
LOCUS       DALPQQ010000283          755 bp    DNA     linear   BCT 22-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus strain K18-6-464
            SAMD00233528-rid16434743.denovo.291, whole genome shotgun sequence.
ACCESSION   DALPQQ010000283 DALPQQ010000000
VERSION     DALPQQ010000283.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMD00233528
            Sequence Read Archive: DRR236061
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 755)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 755)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001543423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001543423.1
            Genome Coverage       :: 77x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/22/2022 17:09:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,811
            CDSs (total)                      :: 2,743
            Genes (coding)                    :: 2,689
            CDSs (with protein)               :: 2,689
            Genes (RNA)                       :: 68
            rRNAs                             :: 2, 4, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 4, 2 (16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 54
            CDSs (without protein)            :: 54
            Pseudo Genes (ambiguous residues) :: 0 of 54
            Pseudo Genes (frameshifted)       :: 27 of 54
            Pseudo Genes (incomplete)         :: 27 of 54
            Pseudo Genes (internal stop)      :: 10 of 54
            Pseudo Genes (multiple problems)  :: 10 of 54
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..755
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMD00233528-rid16434743.denovo.291"
                     /strain="K18-6-464"
                     /db_xref="taxon:1280"
                     /geo_loc_name="Japan: Niigata"
     gene            complement(<1..>755)
                     /locus_tag="O7798_002734"
     rRNA            complement(<1..>755)
                     /locus_tag="O7798_002734"
                     /product="16S ribosomal RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00177"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00177"
BASE COUNT          156 a          228 c          163 g          208 t
ORIGIN      
        1 aaggatgtca agatttggta aggttcttcg cgttgcttcg aattaaacca catgctccac
       61 cgcttgtgcg ggtccccgtc aattcctttg agtttcaacc ttgcggtcgt actccccagg
      121 cggagtgctt aatgcgttag ctgcagcact aaggggcgga aaccccctaa cacttagcac
      181 tcatcgttta cggcgtggac taccagggta tctaatcctg tttgatcccc acgctttcgc
      241 acatcagcgt cagttacaga ccagaaagtc gccttcgcca ctggtgttcc tccatatctc
      301 tgcgcatttc accgctacac atggaattcc actttcctct tctgcactca agttttccag
      361 tttccaatga ccctccacgg ttgagccgtg ggctttcaca tcagacttaa aaaaccgcct
      421 acgcgcgctt tacgcccaat aattccggat aacgcttgcc acctacgtat taccgcggct
      481 gctggcacgt agttagccgt ggctttctga ttaggtaccg tcaagatgtg cacagttact
      541 tacacatatg ttcttcccta ataacagagt tttacgatcc gaagaccttc atcactcacg
      601 cggcgttgct ccgtcaggct ttcgcccatt gcggaagatt ccctactgct gcctcccgta
      661 ggagtctgga ccgtgtctca gttccagtgt ggccgatcac cctctcaggt cggctatgca
      721 tcgttgcctt ggtaagccgt taccttacca actag
//
LOCUS       DALPQQ010000284          745 bp    DNA     linear   BCT 22-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus strain K18-6-464
            SAMD00233528-rid16434743.denovo.292, whole genome shotgun sequence.
ACCESSION   DALPQQ010000284 DALPQQ010000000
VERSION     DALPQQ010000284.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMD00233528
            Sequence Read Archive: DRR236061
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 745)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 745)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001543423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001543423.1
            Genome Coverage       :: 77x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/22/2022 17:09:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,811
            CDSs (total)                      :: 2,743
            Genes (coding)                    :: 2,689
            CDSs (with protein)               :: 2,689
            Genes (RNA)                       :: 68
            rRNAs                             :: 2, 4, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 4, 2 (16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 54
            CDSs (without protein)            :: 54
            Pseudo Genes (ambiguous residues) :: 0 of 54
            Pseudo Genes (frameshifted)       :: 27 of 54
            Pseudo Genes (incomplete)         :: 27 of 54
            Pseudo Genes (internal stop)      :: 10 of 54
            Pseudo Genes (multiple problems)  :: 10 of 54
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..745
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMD00233528-rid16434743.denovo.292"
                     /strain="K18-6-464"
                     /db_xref="taxon:1280"
                     /geo_loc_name="Japan: Niigata"
     gene            <1..716
                     /locus_tag="O7798_002735"
     CDS             <1..716
                     /locus_tag="O7798_002735"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_032495458.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="IS256-like element IS256 family transposase"
                     /protein_id="HDC2864903.1"
                     /translation="RLLSEKNYPYLMTDVLYIKVREENRVLSKSCHIAIGITKDGDRE
                     IIGFMIQSGESEETWTTFFEYLKERGLQGTELVISDAHKGLVSAIRKSFTNVSWQRCQ
                     VHFLRNIFTTIPKKNSKSFREAVKGIFKFTDINLAREAKNRLIHDYIDQPKYSKACAS
                     LDDGFEDAFQYTVQGNSHNRLKSTNLIERLNQEVRRREKIIRIFPNQTSANRLIGAVL
                     MDLHDEWIYSSRKYINFDK"
BASE COUNT          276 a          137 c          128 g          204 t
ORIGIN      
        1 atcgtttatt atcagaaaaa aattatcctt acttaatgac cgatgtactc tatataaaag
       61 tacgagaaga aaatcgagta ctctcaaaaa gctgtcatat agcgattgga ataaccaaag
      121 atggcgaccg tgaaattatc ggcttcatga ttcaaagtgg cgaaagcgaa gagacctgga
      181 caacattttt tgaataccta aaagaacgcg gtttacaagg tacggaactc gttatttctg
      241 atgcgcacaa aggattagtc tctgccatta gaaaatcctt caccaacgta agttggcaaa
      301 gatgccaagt tcacttccta agaaatatct ttaccaccat tcctaaaaaa aattcaaaat
      361 ctttcagaga agctgttaaa ggaattttta agttcacaga tattaactta gcgcgtgagg
      421 ctaaaaatcg attgattcat gattatatcg atcaaccaaa atattcaaaa gcttgcgcat
      481 cattggatga tggattcgaa gacgcctttc aatataccgt acaaggaaat tcccacaatc
      541 gactaaagag taccaatcta attgaacgac tgaatcaaga agtacgcaga agagaaaaga
      601 ttattcgcat cttccccaat caaacatcag ccaatcgctt aattggagcc gttcttatgg
      661 acctacatga tgaatggatt tattcttcaa gaaaatacat caattttgat aagtagaaat
      721 ggtaaaaaca ttgtatagca tttta
//
LOCUS       DALPQQ010000285          734 bp    DNA     linear   BCT 22-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus strain K18-6-464
            SAMD00233528-rid16434743.denovo.293, whole genome shotgun sequence.
ACCESSION   DALPQQ010000285 DALPQQ010000000
VERSION     DALPQQ010000285.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMD00233528
            Sequence Read Archive: DRR236061
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 734)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 734)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001543423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001543423.1
            Genome Coverage       :: 77x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/22/2022 17:09:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,811
            CDSs (total)                      :: 2,743
            Genes (coding)                    :: 2,689
            CDSs (with protein)               :: 2,689
            Genes (RNA)                       :: 68
            rRNAs                             :: 2, 4, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 4, 2 (16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 54
            CDSs (without protein)            :: 54
            Pseudo Genes (ambiguous residues) :: 0 of 54
            Pseudo Genes (frameshifted)       :: 27 of 54
            Pseudo Genes (incomplete)         :: 27 of 54
            Pseudo Genes (internal stop)      :: 10 of 54
            Pseudo Genes (multiple problems)  :: 10 of 54
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..734
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMD00233528-rid16434743.denovo.293"
                     /strain="K18-6-464"
                     /db_xref="taxon:1280"
                     /geo_loc_name="Japan: Niigata"
     gene            complement(411..644)
                     /locus_tag="O7798_002736"
     CDS             complement(411..644)
                     /locus_tag="O7798_002736"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499664.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDC2864904.1"
                     /translation="MVFNDWEINVVYSGEHEVVTNEKSLFVIDEFYDVAIAIYYLDGK
                     LKVAHVNYGSDFTIDVANKVFELNIQNPNVDEH"
BASE COUNT          267 a          106 c           83 g          278 t
ORIGIN      
        1 agaatacata aatgaatagt aatggtgcac agtatagaat aattaaggct atattaagta
       61 taaatatcgt taactgtaag ctatctttag ttttaatata aactattagg ataatcgacg
      121 taagaagaat catatatatt aatgatgaag aagtccatac aaaatccgca tcatttgttg
      181 ttaataatgg gactataatt aatccgaaat taatcatgca tgctatatat actataatgt
      241 tatacacaat gttaattttt gttcaccacc ttatacttct attttaaaaa cttctttata
      301 atgatatatt gtttaatgtt gaaataatta gattatctaa ttttcatttg ctttacatgt
      361 aaaaggctat atatagtatg ctctttatga ttctaaatgc tttttaatat ttaatgctca
      421 tcaacatttg gattttgaat attcaattca aaaactttat tagctacgtc aattgtaaaa
      481 tcagaaccat agttgacatg agctactttt aattttccat ctaaataata gattgcgatt
      541 gcaacatcgt aaaattcgtc aatgacaaat aaactctttt cgtttgttac aacctcatgc
      601 tctcctgagt atacaacgtt aatttcccaa tcattaaaaa ccatttgtta acctccttga
      661 acatttaaat tgattcaact taagtttaac ttattcatac aacttcgtac aatatctaga
      721 tgaacattaa ttgt
//
LOCUS       DALPQQ010000286          733 bp    DNA     linear   BCT 22-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus strain K18-6-464
            SAMD00233528-rid16434743.denovo.294, whole genome shotgun sequence.
ACCESSION   DALPQQ010000286 DALPQQ010000000
VERSION     DALPQQ010000286.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMD00233528
            Sequence Read Archive: DRR236061
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 733)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 733)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001543423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001543423.1
            Genome Coverage       :: 77x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/22/2022 17:09:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,811
            CDSs (total)                      :: 2,743
            Genes (coding)                    :: 2,689
            CDSs (with protein)               :: 2,689
            Genes (RNA)                       :: 68
            rRNAs                             :: 2, 4, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 4, 2 (16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 54
            CDSs (without protein)            :: 54
            Pseudo Genes (ambiguous residues) :: 0 of 54
            Pseudo Genes (frameshifted)       :: 27 of 54
            Pseudo Genes (incomplete)         :: 27 of 54
            Pseudo Genes (internal stop)      :: 10 of 54
            Pseudo Genes (multiple problems)  :: 10 of 54
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..733
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMD00233528-rid16434743.denovo.294"
                     /strain="K18-6-464"
                     /db_xref="taxon:1280"
                     /geo_loc_name="Japan: Niigata"
     gene            <1..>733
                     /locus_tag="O7798_002737"
     CDS             <1..>733
                     /locus_tag="O7798_002737"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500432.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HDC2864905.1"
                     /translation="NLNIDDYIKSLKNKLDSHLHFSIDKIKNSMTTEYGRGTGAYGDF
                     GRYVFGYAVRNWVKGFKSDQDLSNIALMRIFEMGYDAKLHGEFDMWVNRYDNFNNSIE
                     RISKKYQWIAYYEILAKLVDKFPDVQYSGLWDDYIRDIDPTLLLLEIDKESKILVPSP
                     LPSHQSNEWVKNTKVFDETKLFLEIDIDNHRYICLSSKFNFEKREKEIPFEDRDSCYF
                     LAMGYFYNKEDSNEIIKGYENNYDRG"
BASE COUNT          290 a           73 c          128 g          242 t
ORIGIN      
        1 gaatttaaat atagacgatt acataaaatc tttaaaaaac aaattagata gccatttaca
       61 tttttctatc gataaaatta aaaactcaat gacaacggaa tatggaagag gaactggggc
      121 atatggcgat tttggcagat atgtatttgg ttatgctgta cgaaactggg taaagggttt
      181 taaaagtgat caagacttaa gtaatatagc attaatgagg atttttgaaa tgggttatga
      241 tgcaaaatta catggtgaat ttgatatgtg ggttaatcgt tatgataact ttaataattc
      301 aattgaaaga attagcaaaa aatatcaatg gattgcttac tatgaaattt tagctaaact
      361 tgtagataaa tttcctgatg ttcaatattc tggactatgg gatgattata ttagagatat
      421 tgatcctact ttactattac ttgaaattga taaagaatca aaaatactag taccctcacc
      481 acttccttcg catcaatcga atgaatgggt aaaaaatacc aaagtttttg atgaaacaaa
      541 attattttta gaaatagata tagacaatca tagatatata tgtttaagct caaagtttaa
      601 ttttgaaaag agagagaaag aaataccatt tgaagataga gactcatgtt atttcttagc
      661 gatgggatat ttttataata aagaagatag taatgaaatt atcaaaggtt atgaaaataa
      721 ttatgataga ggt
//
LOCUS       DALPQQ010000287          706 bp    DNA     linear   BCT 22-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus strain K18-6-464
            SAMD00233528-rid16434743.denovo.295, whole genome shotgun sequence.
ACCESSION   DALPQQ010000287 DALPQQ010000000
VERSION     DALPQQ010000287.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMD00233528
            Sequence Read Archive: DRR236061
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 706)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 706)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001543423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001543423.1
            Genome Coverage       :: 77x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/22/2022 17:09:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,811
            CDSs (total)                      :: 2,743
            Genes (coding)                    :: 2,689
            CDSs (with protein)               :: 2,689
            Genes (RNA)                       :: 68
            rRNAs                             :: 2, 4, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 4, 2 (16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 54
            CDSs (without protein)            :: 54
            Pseudo Genes (ambiguous residues) :: 0 of 54
            Pseudo Genes (frameshifted)       :: 27 of 54
            Pseudo Genes (incomplete)         :: 27 of 54
            Pseudo Genes (internal stop)      :: 10 of 54
            Pseudo Genes (multiple problems)  :: 10 of 54
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..706
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMD00233528-rid16434743.denovo.295"
                     /strain="K18-6-464"
                     /db_xref="taxon:1280"
                     /geo_loc_name="Japan: Niigata"
     gene            62..373
                     /locus_tag="O7798_002738"
     CDS             62..373
                     /locus_tag="O7798_002738"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500153.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="prepilin-type N-terminal cleavage/methylation
                     domain-containing protein"
                     /protein_id="HDC2864906.1"
                     /translation="MFKFLKKTQAFTLIEMLLVLLIISLLLILIIPNIAKQTAHIQST
                     GCNAQVKMVNSQIEAYALKHNRNPSSIEDLIADGFIKEAQKTCKSGETITISNGEAVA
                     N"
     gene            351..>706
                     /locus_tag="O7798_002739"
     CDS             351..>706
                     /locus_tag="O7798_002739"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500152.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II secretion system protein"
                     /protein_id="HDC2864907.1"
                     /translation="MEKQLQIRKQSAFTMIEMLVVMMLISIFLLLTMTSKGLSNLRVI
                     DDEANIISFITELNYIKSQAIANQGYINVRFYENSDTIKVIENNKIRFLKLKVGKIIN
                     VAKVDIIAFDKKGNIN"
BASE COUNT          286 a           78 c          115 g          227 t
ORIGIN      
        1 ttagtaatta tgttaccaat gtttcaaatg atgcaaagta taaaataatg gaggttaata
       61 tatgtttaaa tttcttaaga aaactcaagc gtttacattg atagagatgc tattagtgtt
      121 attaatcatc agtttattat taattttaat cattccaaat attgctaaac aaactgctca
      181 catacaatca acaggttgta atgcacaggt aaaaatggtt aatagtcaaa ttgaagcgta
      241 tgcattgaaa cataatagaa atccatcgtc tattgaagac ttaattgcag atggttttat
      301 aaaagaagca caaaagacat gtaaatcagg agagacaatc acaattagta atggagaagc
      361 agttgcaaat tagaaagcag tcagcattta ctatgattga gatgcttgtg gtaatgatgt
      421 taatcagtat atttctactt ttgacaatga catctaaagg attaagcaat cttagagtaa
      481 tagatgatga ggcaaatatc atttctttta ttactgaatt gaattatatt aagtcgcaag
      541 ctatagcaaa tcaaggatat atcaatgtta gattttatga aaacagtgac actattaaag
      601 taatagagaa taataaaata cgatttctaa aattaaaagt aggcaaaata attaatgttg
      661 caaaagttga tattattgcc tttgataaaa aagggaatat caataa
//
LOCUS       DALPQQ010000288          703 bp    DNA     linear   BCT 22-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus strain K18-6-464
            SAMD00233528-rid16434743.denovo.296, whole genome shotgun sequence.
ACCESSION   DALPQQ010000288 DALPQQ010000000
VERSION     DALPQQ010000288.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMD00233528
            Sequence Read Archive: DRR236061
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 703)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 703)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001543423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001543423.1
            Genome Coverage       :: 77x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/22/2022 17:09:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,811
            CDSs (total)                      :: 2,743
            Genes (coding)                    :: 2,689
            CDSs (with protein)               :: 2,689
            Genes (RNA)                       :: 68
            rRNAs                             :: 2, 4, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 4, 2 (16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 54
            CDSs (without protein)            :: 54
            Pseudo Genes (ambiguous residues) :: 0 of 54
            Pseudo Genes (frameshifted)       :: 27 of 54
            Pseudo Genes (incomplete)         :: 27 of 54
            Pseudo Genes (internal stop)      :: 10 of 54
            Pseudo Genes (multiple problems)  :: 10 of 54
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..703
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMD00233528-rid16434743.denovo.296"
                     /strain="K18-6-464"
                     /db_xref="taxon:1280"
                     /geo_loc_name="Japan: Niigata"
     gene            168..>703
                     /locus_tag="O7798_002740"
     CDS             168..>703
                     /locus_tag="O7798_002740"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000343527.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage resistance protein"
                     /protein_id="HDC2864908.1"
                     /translation="MDEVSLYKKHFEFHSKLDYVSTINLSRIKEISKRINFASISTDR
                     QVFNNKGNVYHREKDNVAGDYISNLTLDYTIKPKEIGLVYGTVNIKTVDKNGEEEKQS
                     TFKTSHFHNYARFIADLISDRVIYSKQLDCFIIVKNNQYEVIDNTNFALTYPVDNKYY
                     IDDFLDVMLELYREHLNVT"
BASE COUNT          283 a          100 c          106 g          214 t
ORIGIN      
        1 gtgtacttaa aagagttcgg tgaacttata caaaagtttc atgaaataga aaaagcgtca
       61 ctctccacct accaaagcga aagtaacgca aatgtacaaa gtatttaatt aaataaatac
      121 taattaatat attaacaaaa acagaatatt atcgaaaggg tgactacatg gacgaagtat
      181 cactttataa aaaacatttc gaatttcatt ctaaattaga ttatgtttca acaattaatc
      241 tatctaggat aaaagagata agcaagcgta taaactttgc atcaatctca acagatagac
      301 aagtttttaa taacaaagga aatgtatatc accgagaaaa agataatgtt gcaggtgatt
      361 atattagtaa tcttacttta gattatacca taaaaccaaa agaaattggg cttgtttatg
      421 gaaccgtcaa tatcaagact gttgataaaa atggtgaaga agaaaaacaa tctacgttta
      481 aaactagtca ttttcataac tatgcacgtt ttatagctga tctaatttct gacagggtca
      541 tttattcaaa acaactagac tgctttatta tagttaagaa taaccagtat gaagtgatag
      601 acaatacaaa ctttgcgtta acctatccag ttgataacaa gtactatatt gatgatttct
      661 tagatgtgat gttagagctt taccgcgaac atttaaatgt aac
//
LOCUS       DALPQQ010000289          694 bp    DNA     linear   BCT 22-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus strain K18-6-464
            SAMD00233528-rid16434743.denovo.298, whole genome shotgun sequence.
ACCESSION   DALPQQ010000289 DALPQQ010000000
VERSION     DALPQQ010000289.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMD00233528
            Sequence Read Archive: DRR236061
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 694)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 694)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001543423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001543423.1
            Genome Coverage       :: 77x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/22/2022 17:09:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,811
            CDSs (total)                      :: 2,743
            Genes (coding)                    :: 2,689
            CDSs (with protein)               :: 2,689
            Genes (RNA)                       :: 68
            rRNAs                             :: 2, 4, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 4, 2 (16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 54
            CDSs (without protein)            :: 54
            Pseudo Genes (ambiguous residues) :: 0 of 54
            Pseudo Genes (frameshifted)       :: 27 of 54
            Pseudo Genes (incomplete)         :: 27 of 54
            Pseudo Genes (internal stop)      :: 10 of 54
            Pseudo Genes (multiple problems)  :: 10 of 54
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..694
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMD00233528-rid16434743.denovo.298"
                     /strain="K18-6-464"
                     /db_xref="taxon:1280"
                     /geo_loc_name="Japan: Niigata"
     gene            39..338
                     /locus_tag="O7798_002741"
     CDS             39..338
                     /locus_tag="O7798_002741"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000844410.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="competence protein ComGE"
                     /protein_id="HDC2864909.1"
                     /translation="MKSYKCKGSFLIDSMAGFLLIGLITLLLIPMMNQMQASINHKLQ
                     TIDASKVILTTVSKINKEELKKGVTIGKYDIKQSDQQICAISKNTTSYQKTCIQY"
     gene            256..>694
                     /locus_tag="O7798_002742"
     CDS             256..>694
                     /locus_tag="O7798_002742"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500150.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="prepilin-type N-terminal cleavage/methylation
                     domain-containing protein"
                     /protein_id="HDC2864910.1"
                     /translation="MILSKVTNKFVLFQKIPLLIKRHVYSINVKAFSLIEMLVAMMVI
                     SITLLIVPDLIRLSKTFLIESRDLTTVDFEFFSRDILDDFKGVDRNDIEIRQHRIILH
                     KGEEMIEYKLINNKIIKVVNDRGNITMINNVTAFTANIYYKSII"
BASE COUNT          280 a           79 c          110 g          225 t
ORIGIN      
        1 tagaataata ttccatattg aaaaaggaag aattcgttat gaaaagctat aagtgtaaag
       61 gttcattctt aatagatagt atggctggat ttttgctaat tggattgatt acattactat
      121 tgataccaat gatgaatcaa atgcaagcga gtataaacca taaactacaa acaattgatg
      181 cttctaaagt aattttgacg actgtatcta aaattaataa agaagaactt aagaaggggg
      241 taactatagg gaagtatgat attaagcaaa gtgaccaaca aatttgtgct atttcaaaaa
      301 ataccacttc ttatcaaaag acatgtatac agtattaatg tcaaagcttt ttcgctcatt
      361 gaaatgttag tagcgatgat ggttataagt ataactttac taattgttcc agacttaatt
      421 agacttagta aaacttttct aattgaaagt agggatttaa caactgtaga tttcgaattt
      481 ttctcaagag atattctaga tgattttaaa ggagtagata gaaacgatat tgaaattagg
      541 caacaccgta tcattttaca taaaggtgaa gaaatgatcg aatacaaatt aattaataat
      601 aaaattatta aagttgtaaa tgacagagga aatataacaa tgattaataa tgttacagca
      661 tttactgcaa atatctacta taaatccatt atta
//
LOCUS       DALPQQ010000290          691 bp    DNA     linear   BCT 22-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus strain K18-6-464
            SAMD00233528-rid16434743.denovo.299, whole genome shotgun sequence.
ACCESSION   DALPQQ010000290 DALPQQ010000000
VERSION     DALPQQ010000290.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMD00233528
            Sequence Read Archive: DRR236061
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 691)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 691)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001543423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001543423.1
            Genome Coverage       :: 77x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/22/2022 17:09:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,811
            CDSs (total)                      :: 2,743
            Genes (coding)                    :: 2,689
            CDSs (with protein)               :: 2,689
            Genes (RNA)                       :: 68
            rRNAs                             :: 2, 4, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 4, 2 (16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 54
            CDSs (without protein)            :: 54
            Pseudo Genes (ambiguous residues) :: 0 of 54
            Pseudo Genes (frameshifted)       :: 27 of 54
            Pseudo Genes (incomplete)         :: 27 of 54
            Pseudo Genes (internal stop)      :: 10 of 54
            Pseudo Genes (multiple problems)  :: 10 of 54
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..691
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMD00233528-rid16434743.denovo.299"
                     /strain="K18-6-464"
                     /db_xref="taxon:1280"
                     /geo_loc_name="Japan: Niigata"
     gene            <1..>691
                     /locus_tag="O7798_002743"
     CDS             <1..>691
                     /locus_tag="O7798_002743"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501031.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="AraC family transcriptional regulator"
                     /protein_id="HDC2864911.1"
                     /translation="RCKIAFLINDLNTTAIQKLKRLIDNYIGVFELIYHLEPKELNTR
                     YDKEIDHLIDYFILPLRQIEQVSIARSKIICDVDLINENNDLKEKITMSDINKVSELL
                     TNYTKFRGLIMHMSIISESSKEINLTRLSIFIFIINILNQLRGIVIYQNDTMIVTKFK
                     HEVQCVICLPAALLNENSDAIRLSCKGLQQFSHAKTKQIVLSIDKDNHTSENGVLVND
                     IMQQHSYWKAN"
BASE COUNT          269 a           87 c          106 g          229 t
ORIGIN      
        1 atagatgtaa gattgcattt ttaattaacg acttaaatac tactgcaatt caaaaactga
       61 aacgtttaat agataattat ataggagtat ttgaattaat atatcatctg gaaccaaaag
      121 agttgaatac gcgctatgat aaagaaattg atcatctaat agactatttt atcttaccgc
      181 taagacaaat agaacaggtg tctattgcac gttctaaaat tatatgtgat gtagatttga
      241 ttaatgagaa taatgactta aaagaaaaaa tcacaatgtc tgatattaat aaggtttctg
      301 aacttttgac aaattataca aaatttcgag gacttattat gcacatgtca attataagtg
      361 aatcgagcaa agaaataaat ttaactagat tatcaatatt catttttatc ataaatatac
      421 ttaatcaatt acgagggatt gttatttatc aaaatgacac gatgattgta acgaagttca
      481 aacatgaagt acaatgtgtc atttgtttgc cagccgcatt gttaaatgag aattcagacg
      541 ctatacgttt atcgtgtaag ggtcttcaac aatttagcca tgctaaaact aaacaaattg
      601 ttttaagtat agataaagat aatcatactt ccgaaaatgg tgtacttgtg aatgatatta
      661 tgcaacaaca cagttattgg aaagctaatt t
//
LOCUS       DALPQQ010000291          683 bp    DNA     linear   BCT 22-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus strain K18-6-464
            SAMD00233528-rid16434743.denovo.300, whole genome shotgun sequence.
ACCESSION   DALPQQ010000291 DALPQQ010000000
VERSION     DALPQQ010000291.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMD00233528
            Sequence Read Archive: DRR236061
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 683)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 683)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001543423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001543423.1
            Genome Coverage       :: 77x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/22/2022 17:09:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,811
            CDSs (total)                      :: 2,743
            Genes (coding)                    :: 2,689
            CDSs (with protein)               :: 2,689
            Genes (RNA)                       :: 68
            rRNAs                             :: 2, 4, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 4, 2 (16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 54
            CDSs (without protein)            :: 54
            Pseudo Genes (ambiguous residues) :: 0 of 54
            Pseudo Genes (frameshifted)       :: 27 of 54
            Pseudo Genes (incomplete)         :: 27 of 54
            Pseudo Genes (internal stop)      :: 10 of 54
            Pseudo Genes (multiple problems)  :: 10 of 54
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..683
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMD00233528-rid16434743.denovo.300"
                     /strain="K18-6-464"
                     /db_xref="taxon:1280"
                     /geo_loc_name="Japan: Niigata"
     gene            321..>683
                     /locus_tag="O7798_002744"
     CDS             321..>683
                     /locus_tag="O7798_002744"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500926.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDC2864912.1"
                     /translation="MCFDINNLDIKKLNFRKVKNAIHLSLSGDKYQFLEDGKTINNTY
                     FLAVYDNAINIFEDLFSPSDSINLVHVVYVYSEPYKKTNVIKKFTSLTIDELYYFKEY
                     KKEKDDNILCEEFSYKCSI"
BASE COUNT          275 a           67 c          117 g          224 t
ORIGIN      
        1 ttgtaccatt tgaatctcgg aaaatgccac tatttatgac gataattttt acaatctaaa
       61 agcagtaaag actcataata taaccaaaaa cattaataaa agtttgttaa atgataaggg
      121 gatgagtatt ggtgaattta ctcaaaaggt ttaagggaaa aatcctacct ggagagattc
      181 aaaaactaaa tggactattt ccaaaaataa agggcaatca catggtggtt cttattggaa
      241 gttaataaat aacaaaggaa aaagaatagc ttctttaact aaagaaggaa aaatcttaag
      301 ggaataaggt gttgtaaatt atgtgctttg atataaataa tttggatata aaaaagttga
      361 attttagaaa ggtaaaaaac gcaattcatt taagtttaag tggcgataaa taccagtttt
      421 tggaggacgg taaaactatc aataatactt attttttagc tgtatatgat aatgcaataa
      481 acatttttga agatttgttt tcgccttctg attctataaa tttggttcat gtagtatatg
      541 tttatagtga accttataag aaaacaaatg ttataaaaaa atttacatcg ttaacaatag
      601 atgaattgta ttactttaaa gaatataaaa aggagaagga tgataatatt ttgtgcgagg
      661 agttttcata taagtgttcc ata
//
LOCUS       DALPQQ010000292          680 bp    DNA     linear   BCT 22-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus strain K18-6-464
            SAMD00233528-rid16434743.denovo.301, whole genome shotgun sequence.
ACCESSION   DALPQQ010000292 DALPQQ010000000
VERSION     DALPQQ010000292.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMD00233528
            Sequence Read Archive: DRR236061
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 680)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 680)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001543423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001543423.1
            Genome Coverage       :: 77x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/22/2022 17:09:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,811
            CDSs (total)                      :: 2,743
            Genes (coding)                    :: 2,689
            CDSs (with protein)               :: 2,689
            Genes (RNA)                       :: 68
            rRNAs                             :: 2, 4, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 4, 2 (16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 54
            CDSs (without protein)            :: 54
            Pseudo Genes (ambiguous residues) :: 0 of 54
            Pseudo Genes (frameshifted)       :: 27 of 54
            Pseudo Genes (incomplete)         :: 27 of 54
            Pseudo Genes (internal stop)      :: 10 of 54
            Pseudo Genes (multiple problems)  :: 10 of 54
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..680
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMD00233528-rid16434743.denovo.301"
                     /strain="K18-6-464"
                     /db_xref="taxon:1280"
                     /geo_loc_name="Japan: Niigata"
     gene            <1..628
                     /locus_tag="O7798_002745"
     CDS             <1..628
                     /locus_tag="O7798_002745"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501250.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="DUF3427 domain-containing protein"
                     /protein_id="HDC2864913.1"
                     /translation="GIEKIYGSPIIERNERMIRLSDAFTNALSNQTFNMFLEDLIELS
                     KYNNEKYQKGKNGLILYNKYSREDFSKIFNWNKNGSSVIMGYMIKSQEMPIFITYDKH
                     EDISDSTKYEDEFLSQDELKWFTKSNRTLESKEVQKILSHRAKGIKMYIFVQKKDDDG
                     IYFYYLGTAGYIEGSEKQDKMPNGSNVVTMDLALDKAVRDDIYRYLTN"
BASE COUNT          295 a           64 c          116 g          205 t
ORIGIN      
        1 aggaattgaa aaaatctatg gaagtcccat tatagaacgt aatgaaagaa tgataagact
       61 aagcgatgca tttactaatg ctctaagtaa tcaaacattt aatatgtttt tagaagatct
      121 tattgaatta tcaaagtata acaatgaaaa ataccaaaaa ggtaaaaatg gactgatttt
      181 atataataaa tattcaagag aagattttag taaaatattt aattggaata aaaatggttc
      241 gtctgtaatc atgggataca tgataaaaag ccaagaaatg ccaatattta tcacttatga
      301 taagcatgag gatataagtg atagcacaaa atatgaagat gaatttttaa gtcaagatga
      361 attaaaatgg tttactaaat ctaatagaac gctagaatca aaagaagttc agaaaatttt
      421 gtcccataga gcaaaaggaa ttaaaatgta tatttttgta cagaaaaaag atgatgatgg
      481 tatatatttt tattatttag gaactgctgg atatatagaa ggttcagaaa agcaagataa
      541 aatgccgaat ggttcaaacg tagtaacgat ggatttagca ctggataaag ctgtaagaga
      601 tgatatatat cgttatctaa caaattaatg taaaccgaaa aatgaatgtt agtaaagttg
      661 tatttaaaca tcaattttaa
//
LOCUS       DALPQQ010000293          663 bp    DNA     linear   BCT 22-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus strain K18-6-464
            SAMD00233528-rid16434743.denovo.302, whole genome shotgun sequence.
ACCESSION   DALPQQ010000293 DALPQQ010000000
VERSION     DALPQQ010000293.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMD00233528
            Sequence Read Archive: DRR236061
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 663)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 663)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001543423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001543423.1
            Genome Coverage       :: 77x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/22/2022 17:09:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,811
            CDSs (total)                      :: 2,743
            Genes (coding)                    :: 2,689
            CDSs (with protein)               :: 2,689
            Genes (RNA)                       :: 68
            rRNAs                             :: 2, 4, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 4, 2 (16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 54
            CDSs (without protein)            :: 54
            Pseudo Genes (ambiguous residues) :: 0 of 54
            Pseudo Genes (frameshifted)       :: 27 of 54
            Pseudo Genes (incomplete)         :: 27 of 54
            Pseudo Genes (internal stop)      :: 10 of 54
            Pseudo Genes (multiple problems)  :: 10 of 54
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..663
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMD00233528-rid16434743.denovo.302"
                     /strain="K18-6-464"
                     /db_xref="taxon:1280"
                     /geo_loc_name="Japan: Niigata"
     gene            <1..552
                     /gene="fmhC"
                     /locus_tag="O7798_002746"
     CDS             <1..552
                     /gene="fmhC"
                     /locus_tag="O7798_002746"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499756.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FemA/FemB family glycyltransferase FmhC"
                     /protein_id="HDC2864914.1"
                     /translation="KDKAMLKIACINLNEYQDKLKIQLLKIENEMMTVNRALNENPNS
                     KKNKSKLNQLNMQLSSINNRISKTEELIFEDGPVLDLAAALFICTDDEVYYLSSGSNP
                     KYNQYMGAYHLQWHMIKYAKSHNINRYNFYGITGVFSNEADDFGVQQFKKGFNAHVEE
                     LIGDFIKPVRPILYKFAKLIYKV"
BASE COUNT          267 a           71 c           96 g          229 t
ORIGIN      
        1 aaagataagg caatgttaaa gatagcttgt ataaatctta atgaatatca agataaatta
       61 aaaatacaat tattgaaaat cgaaaatgaa atgatgactg tgaacagagc attaaatgaa
      121 aatccaaatt ctaaaaaaaa taaatcaaaa ttaaatcagt taaatatgca attatctagt
      181 attaataata gaattagtaa aaccgaagaa ctaatatttg aagatggacc tgttttggat
      241 ttagctgctg ctttatttat atgtactgat gatgaagttt attatctatc aagtggatca
      301 aatccgaaat ataatcagta tatgggtgca tatcatctac aatggcatat gataaaatat
      361 gcaaaatcac ataatattaa taggtataat ttttatggaa taacaggcgt ctttagtaat
      421 gaggcggatg attttggtgt tcaacaattt aaaaagggtt ttaatgcaca tgttgaagaa
      481 ttaattggtg atttcatcaa accagtaaga ccaattctat ataaatttgc aaaacttatt
      541 tataaggttt aattataaag tatgttggaa attgaaattt taaattcttt ccaacatact
      601 tttcactttt taagtcagta tttttactcc ttaaaataac attacatcga caatgttttt
      661 gta
//
LOCUS       DALPQQ010000294          646 bp    DNA     linear   BCT 22-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus strain K18-6-464
            SAMD00233528-rid16434743.denovo.303, whole genome shotgun sequence.
ACCESSION   DALPQQ010000294 DALPQQ010000000
VERSION     DALPQQ010000294.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMD00233528
            Sequence Read Archive: DRR236061
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 646)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 646)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001543423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001543423.1
            Genome Coverage       :: 77x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/22/2022 17:09:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,811
            CDSs (total)                      :: 2,743
            Genes (coding)                    :: 2,689
            CDSs (with protein)               :: 2,689
            Genes (RNA)                       :: 68
            rRNAs                             :: 2, 4, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 4, 2 (16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 54
            CDSs (without protein)            :: 54
            Pseudo Genes (ambiguous residues) :: 0 of 54
            Pseudo Genes (frameshifted)       :: 27 of 54
            Pseudo Genes (incomplete)         :: 27 of 54
            Pseudo Genes (internal stop)      :: 10 of 54
            Pseudo Genes (multiple problems)  :: 10 of 54
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..646
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMD00233528-rid16434743.denovo.303"
                     /strain="K18-6-464"
                     /db_xref="taxon:1280"
                     /geo_loc_name="Japan: Niigata"
     gene            complement(<1..200)
                     /locus_tag="O7798_002747"
     CDS             complement(<1..200)
                     /locus_tag="O7798_002747"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499375.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDC2864915.1"
                     /translation="MSEWHINNQSTKPFLIQQAEKQLSIVKPLPNGSFQILTEINLEN
                     GNISNIDHSLLVSVDPKALEIS"
     gene            complement(262..546)
                     /locus_tag="O7798_002748"
     CDS             complement(262..546)
                     /locus_tag="O7798_002748"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499376.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDC2864916.1"
                     /translation="MNELTKEQKYTIAKFYKLYIERSNKGETETVANFFGDAKDAREN
                     YFCDRDYQDFLTNCQILIQNKYLTGEVLDDNIYNISILNKTFIEFEQNFG"
BASE COUNT          207 a           94 c           95 g          250 t
ORIGIN      
        1 atacttattt ctaatgcttt ggggtctact gaaacaagta aagaatgatc gatgttacta
       61 atattgccat tctccaaatt tatttctgtg agtatttgga agctaccatt aggcaacggt
      121 ttaacaatag acaattgctt ttccgcttgt tgtattaaaa aaggttttgt agattgatta
      181 ttaatatgcc attcactcat gtatgttttt cactcctgct ttaaaatagg gttagaaagt
      241 ttatagttga gacattcatg ttcaaccaaa attttgttcg aattcaataa atgtcttgtt
      301 taaaatagaa atattgtaaa tgttatcgtc caaaacttca ccagttaagt atttgttttg
      361 aattaaaatt tggcagttag ttaagaagtc ttgataatca cgatcgcaaa aatagttttc
      421 acgtgcatct ttagcatcgc caaaaaagtt agcgactgtt tctgtttctc ctttattcga
      481 acgttcaata tataatttgt aaaatttagc tattgtatac ttttgttctt tagttagttc
      541 attcaaaata ttgggcctcc tgaaatatca tttgtaatct atacccaatt tattgcaaaa
      601 cacaaactaa tttaactatt tgatgaaact gtgttaataa gcttta
//
LOCUS       DALPQQ010000295          631 bp    DNA     linear   BCT 22-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus strain K18-6-464
            SAMD00233528-rid16434743.denovo.304, whole genome shotgun sequence.
ACCESSION   DALPQQ010000295 DALPQQ010000000
VERSION     DALPQQ010000295.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMD00233528
            Sequence Read Archive: DRR236061
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 631)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 631)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001543423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001543423.1
            Genome Coverage       :: 77x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/22/2022 17:09:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,811
            CDSs (total)                      :: 2,743
            Genes (coding)                    :: 2,689
            CDSs (with protein)               :: 2,689
            Genes (RNA)                       :: 68
            rRNAs                             :: 2, 4, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 4, 2 (16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 54
            CDSs (without protein)            :: 54
            Pseudo Genes (ambiguous residues) :: 0 of 54
            Pseudo Genes (frameshifted)       :: 27 of 54
            Pseudo Genes (incomplete)         :: 27 of 54
            Pseudo Genes (internal stop)      :: 10 of 54
            Pseudo Genes (multiple problems)  :: 10 of 54
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..631
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMD00233528-rid16434743.denovo.304"
                     /strain="K18-6-464"
                     /db_xref="taxon:1280"
                     /geo_loc_name="Japan: Niigata"
     gene            92..>631
                     /locus_tag="O7798_002749"
     CDS             92..>631
                     /locus_tag="O7798_002749"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500444.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4888 domain-containing protein"
                     /protein_id="HDC2864917.1"
                     /translation="MNTKFLGKTLVASALVLTTLGTGLHSSYLGLDTNKVVKTAKAEE
                     KMTDGQLWKKVKDSLHDSDIILSNEYETINVTYLLSNGYYSSVSAPGNDDGGHLTQSI
                     DFKGLKQIDLTKENVYDDFNKKLDAKNTWNSLTEKLKGLGLLQNGQKVSIYSSDSSSP
                     VSGKVGEGVTSGGENTLTKR"
BASE COUNT          249 a           82 c          105 g          195 t
ORIGIN      
        1 catttttgat atttagttaa ttgttctttt aaaaaattat tattatattt tcattgtaaa
       61 cgtttacaat ataaaaaaag gagcaataaa aatgaataca aaatttttag gtaaaacatt
      121 agtagcaagt gctttagtat taacaacatt aggaacaggc ttacattctt catacttagg
      181 attagataca aataaagttg ttaaaacggc taaagcagaa gaaaaaatga cagatggtca
      241 attatggaaa aaagttaaag attcattaca tgattctgat attattttaa gtaacgagta
      301 cgaaacaatc aacgttactt atttattaag caatggatat tatagcagcg tttctgctcc
      361 tggaaatgat gatggaggcc atctaacaca atctatagac tttaaaggat taaaacaaat
      421 tgatttaact aaggaaaatg tctacgatga ctttaacaaa aagctagatg ctaaaaatac
      481 atggaattct ctaaccgaga agttaaaagg tcttggttta ctacaaaatg gccaaaaagt
      541 atctatttat tcttcagata gctcttctcc agtctcgggt aaagtgggag aaggagtaac
      601 tagtggtggc gaaaatactc taactaaacg c
//
LOCUS       DALPQQ010000296          618 bp    DNA     linear   BCT 22-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus strain K18-6-464
            SAMD00233528-rid16434743.denovo.305, whole genome shotgun sequence.
ACCESSION   DALPQQ010000296 DALPQQ010000000
VERSION     DALPQQ010000296.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMD00233528
            Sequence Read Archive: DRR236061
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 618)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 618)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001543423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001543423.1
            Genome Coverage       :: 77x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/22/2022 17:09:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,811
            CDSs (total)                      :: 2,743
            Genes (coding)                    :: 2,689
            CDSs (with protein)               :: 2,689
            Genes (RNA)                       :: 68
            rRNAs                             :: 2, 4, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 4, 2 (16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 54
            CDSs (without protein)            :: 54
            Pseudo Genes (ambiguous residues) :: 0 of 54
            Pseudo Genes (frameshifted)       :: 27 of 54
            Pseudo Genes (incomplete)         :: 27 of 54
            Pseudo Genes (internal stop)      :: 10 of 54
            Pseudo Genes (multiple problems)  :: 10 of 54
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..618
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMD00233528-rid16434743.denovo.305"
                     /strain="K18-6-464"
                     /db_xref="taxon:1280"
                     /geo_loc_name="Japan: Niigata"
     gene            complement(168..272)
                     /locus_tag="O7798_002750"
     CDS             complement(168..272)
                     /locus_tag="O7798_002750"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501312.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDC2864918.1"
                     /translation="MLNIKAIKPSEKGIKVLSHQFKQVSKTQLNYFFN"
     gene            complement(435..569)
                     /locus_tag="O7798_002751"
     CDS             complement(435..569)
                     /locus_tag="O7798_002751"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501313.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDC2864919.1"
                     /translation="MTDKNGHGIAITGIILFVINALQINNDLPISISSKLKKYIHKPD
                     "
BASE COUNT          211 a           89 c           62 g          256 t
ORIGIN      
        1 ttgccgtaat tgaacgtata tttcttcttc aactattatt tcatctttag cataatctat
       61 atataaaatt ttatgctatt atttaaataa ttcgctataa cttaacatac gttttcgata
      121 taaaccttgt tctaaatctc aataattttt tgctgttttc atcgtcatta gttaaaaaaa
      181 taatttaact gagtttttga gacctgttta aattgatgac tcaaaacctt tatccccttt
      241 tcactcggtt taattgcttt aatatttaac acagtctcat tgtaattttg ctactaagtt
      301 tgaaatattt cgattcgaat gtgaaacatc atttattatt actttcgaca gctagaaaaa
      361 tattgttaaa ccaaaactat aattaccact tttatataga actatatata aattttaact
      421 ttgagacaga actgctagtc aggtttatga atatatttct ttagtttact tgatatactt
      481 attggtaaat cattatttat ttgaagagca tttataacaa aaagtataat cccagttata
      541 gcgattccat gaccattttt atcagtcaaa gattcatcaa caaaaacttt ttgataaatt
      601 tatatatttg cataattt
//
LOCUS       DALPQQ010000297          616 bp    DNA     linear   BCT 22-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus strain K18-6-464
            SAMD00233528-rid16434743.denovo.306, whole genome shotgun sequence.
ACCESSION   DALPQQ010000297 DALPQQ010000000
VERSION     DALPQQ010000297.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMD00233528
            Sequence Read Archive: DRR236061
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 616)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 616)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001543423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001543423.1
            Genome Coverage       :: 77x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/22/2022 17:09:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,811
            CDSs (total)                      :: 2,743
            Genes (coding)                    :: 2,689
            CDSs (with protein)               :: 2,689
            Genes (RNA)                       :: 68
            rRNAs                             :: 2, 4, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 4, 2 (16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 54
            CDSs (without protein)            :: 54
            Pseudo Genes (ambiguous residues) :: 0 of 54
            Pseudo Genes (frameshifted)       :: 27 of 54
            Pseudo Genes (incomplete)         :: 27 of 54
            Pseudo Genes (internal stop)      :: 10 of 54
            Pseudo Genes (multiple problems)  :: 10 of 54
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..616
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMD00233528-rid16434743.denovo.306"
                     /strain="K18-6-464"
                     /db_xref="taxon:1280"
                     /geo_loc_name="Japan: Niigata"
     gene            36..>616
                     /gene="sec3"
                     /locus_tag="O7798_002752"
     CDS             36..>616
                     /gene="sec3"
                     /locus_tag="O7798_002752"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000278088.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="staphylococcal enterotoxin type C3"
                     /protein_id="HDC2864920.1"
                     /translation="MYKRLFISRVILIFALILVISTPNVLAESQPDPMPDDLHKSSEF
                     TGTMGNMKYLYDDHYVSATKVKSVDKFLAHDLIYNISDKKLKNYDKVKTELLNEDLAK
                     KYKDEVVDVYGSNYYVNCYFSSKDNVGKVTGGKTCMYGGITKHEGNHFDNGNLQNVLV
                     RVYENKRNTISFEVQTDKKSVTAQELDIKARNF"
BASE COUNT          245 a           68 c          113 g          190 t
ORIGIN      
        1 tactttttgg gaatgttgga taaaggagat aaaaaatgta taagagatta tttatttcac
       61 gtgtaatttt gatattcgca ctgatactag ttatttctac acccaacgtt ttagcagaga
      121 gtcaaccaga ccctatgcca gatgatttgc acaaatcaag tgagtttact ggtacgatgg
      181 gtaatatgaa atatttatat gatgatcatt atgtatcagc aactaaagtt aagtctgtag
      241 ataaattttt ggcacatgat ttaatttata acattagtga taaaaaactg aaaaattatg
      301 acaaagtgaa aacagagtta ttaaatgaag atttagcaaa gaagtacaaa gatgaagtag
      361 ttgatgtgta tggatcaaat tactatgtaa actgctattt ttcatccaaa gataatgtag
      421 gtaaagttac aggtggtaaa acttgtatgt atggaggaat aacaaaacat gaaggaaacc
      481 actttgataa tgggaactta caaaatgtac ttgtaagagt ttatgaaaat aaaagaaaca
      541 caatttcttt tgaagtacaa actgataaga aaagtgtaac agctcaagaa ctagacataa
      601 aagctaggaa tttttt
//
LOCUS       DALPQQ010000298          608 bp    DNA     linear   BCT 22-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus strain K18-6-464
            SAMD00233528-rid16434743.denovo.307, whole genome shotgun sequence.
ACCESSION   DALPQQ010000298 DALPQQ010000000
VERSION     DALPQQ010000298.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMD00233528
            Sequence Read Archive: DRR236061
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 608)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 608)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001543423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001543423.1
            Genome Coverage       :: 77x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/22/2022 17:09:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,811
            CDSs (total)                      :: 2,743
            Genes (coding)                    :: 2,689
            CDSs (with protein)               :: 2,689
            Genes (RNA)                       :: 68
            rRNAs                             :: 2, 4, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 4, 2 (16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 54
            CDSs (without protein)            :: 54
            Pseudo Genes (ambiguous residues) :: 0 of 54
            Pseudo Genes (frameshifted)       :: 27 of 54
            Pseudo Genes (incomplete)         :: 27 of 54
            Pseudo Genes (internal stop)      :: 10 of 54
            Pseudo Genes (multiple problems)  :: 10 of 54
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..608
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMD00233528-rid16434743.denovo.307"
                     /strain="K18-6-464"
                     /db_xref="taxon:1280"
                     /geo_loc_name="Japan: Niigata"
     gene            complement(425..604)
                     /locus_tag="O7798_002753"
     CDS             complement(425..604)
                     /locus_tag="O7798_002753"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500652.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDC2864921.1"
                     /translation="MKFKTTKECKSNNIFKRSQEINNSESEKGCLWGISMLILLFLLI
                     LFGITACSSSIHFIN"
BASE COUNT          253 a           87 c           74 g          194 t
ORIGIN      
        1 cgtccataca taatcagcat tagtcattaa gaatggtgcg gccattatga aaaaatttat
       61 aatgcagatg aaatagacaa ttagactata aattaggtaa ataacaatac acacccttca
      121 taaataaata atttaaatcc tatatatttt aacaaaagta aaacacagaa gtgtagaaaa
      181 taaaaaatat tggtaaataa aatcaataag tttaaccaat atgttgctcg cttcataccg
      241 tatattgcaa caaaaattcc gatcaagaaa aatatagccc ctatgataaa acagaaatcc
      301 gatgctgaat tattaaaaaa tgaggtgttt agagttagaa aatgagttaa tgagttgact
      361 ataactaata agatattaat tatatttgta tggttcttca catgatacct ccaagtaaaa
      421 aaatctaatt aataaagtga atgcttgatg aacaagcagt tattccaaac agaatcaata
      481 agaaaagtag aatcaacatg ctaatgcccc ataaacaacc cttttcactt tcactattat
      541 taatttcttg acttctttta aagatattat tacttttaca ttctttagtt gttttaaatt
      601 tcacgttt
//
LOCUS       DALPQQ010000299          604 bp    DNA     linear   BCT 22-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus strain K18-6-464
            SAMD00233528-rid16434743.denovo.308, whole genome shotgun sequence.
ACCESSION   DALPQQ010000299 DALPQQ010000000
VERSION     DALPQQ010000299.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMD00233528
            Sequence Read Archive: DRR236061
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 604)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 604)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001543423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001543423.1
            Genome Coverage       :: 77x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/22/2022 17:09:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,811
            CDSs (total)                      :: 2,743
            Genes (coding)                    :: 2,689
            CDSs (with protein)               :: 2,689
            Genes (RNA)                       :: 68
            rRNAs                             :: 2, 4, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 4, 2 (16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 54
            CDSs (without protein)            :: 54
            Pseudo Genes (ambiguous residues) :: 0 of 54
            Pseudo Genes (frameshifted)       :: 27 of 54
            Pseudo Genes (incomplete)         :: 27 of 54
            Pseudo Genes (internal stop)      :: 10 of 54
            Pseudo Genes (multiple problems)  :: 10 of 54
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..604
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMD00233528-rid16434743.denovo.308"
                     /strain="K18-6-464"
                     /db_xref="taxon:1280"
                     /geo_loc_name="Japan: Niigata"
     gene            106..604
                     /locus_tag="O7798_002754"
                     /pseudo
     CDS             106..604
                     /locus_tag="O7798_002754"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000277741.1"
                     /note="frameshifted; incomplete; missing C-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
BASE COUNT          223 a           93 c           90 g          198 t
ORIGIN      
        1 tcccaacttg cacataaatg taaaattcaa taaaatgaat tttctgtgtt gggtcccttc
       61 gtataattta ataaatacta ctaaactaaa ttaaagaggt gccttatgta taaaaattat
      121 aacatgaccc caacttacac taccaataga aacttcgtta gaattcctca aaatgatatt
      181 tcgcgatatg ttaatgaaat tgttgaaacg atacctgata gcgaattcga tgaattcaga
      241 catcatcgtg gtgcaacatc ctatcatcca aaaatgatgt taaaaatcat cttatatgca
      301 tatactcaat ctgtattttc tggtcgtaga atagagaaat tacttcatga cagtattcga
      361 atgatgtggt tagcccaaga tcaaacactt tcttataaaa ctattaatcg ttttagagtg
      421 aatcctaata ctgatgcgtt aattgaatct ttatttattc agttctatag tcaatgttta
      481 aagcaaaatc ttattgatga taattcaatt tttattgatg gtacaaaagt agaagctagt
      541 gccaatagat atacattggt gcggaagaaa gtattcaaaa tcacgaatcg aaattgaacg
      601 agaa
//
LOCUS       DALPQQ010000300          601 bp    DNA     linear   BCT 22-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus strain K18-6-464
            SAMD00233528-rid16434743.denovo.309, whole genome shotgun sequence.
ACCESSION   DALPQQ010000300 DALPQQ010000000
VERSION     DALPQQ010000300.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMD00233528
            Sequence Read Archive: DRR236061
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 601)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 601)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001543423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001543423.1
            Genome Coverage       :: 77x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/22/2022 17:09:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,811
            CDSs (total)                      :: 2,743
            Genes (coding)                    :: 2,689
            CDSs (with protein)               :: 2,689
            Genes (RNA)                       :: 68
            rRNAs                             :: 2, 4, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 4, 2 (16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 54
            CDSs (without protein)            :: 54
            Pseudo Genes (ambiguous residues) :: 0 of 54
            Pseudo Genes (frameshifted)       :: 27 of 54
            Pseudo Genes (incomplete)         :: 27 of 54
            Pseudo Genes (internal stop)      :: 10 of 54
            Pseudo Genes (multiple problems)  :: 10 of 54
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..601
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMD00233528-rid16434743.denovo.309"
                     /strain="K18-6-464"
                     /db_xref="taxon:1280"
                     /geo_loc_name="Japan: Niigata"
     gene            123..>601
                     /locus_tag="O7798_002755"
     CDS             123..>601
                     /locus_tag="O7798_002755"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000277741.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HDC2864922.1"
                     /translation="MYKNYNLIQLTLPIETSVRIPQIDISRYVNEIVETIPDSEFDKF
                     RHHRGATSYHPKMMLKITLYAYTQSVFSGRRIEKLLHDSIRMMWLAQNQTPSYKTINR
                     IRVNPNTDALIESLFIQFHSQCLKQNLIDGTKVEANANRYTFVWKKSIQNHESKLNE"
BASE COUNT          226 a           94 c           85 g          196 t
ORIGIN      
        1 aaaaaataag acactttgcc aaacttgcac ataaatgttt aattcaataa tttgaatttt
       61 ctgtgttggg tcccttcgta taatttaata aataccacta aactaaatta atgaagtgcc
      121 ttatgtataa aaattataac ttgatccaac ttacactacc aatagaaact tctgttagaa
      181 ttcctcaaat tgatatttcg cgatatgtta atgaaattgt tgaaacgata cctgatagcg
      241 aattcgataa attcagacat catcgtggcg caacatccta tcatccaaaa atgatgttaa
      301 aaatcacctt atatgcatat actcaatctg tattttctgg tcgtagaata gagaaattac
      361 ttcatgacag tattcgaatg atgtggttag ctcaaaatca aacaccttct tataaaacta
      421 ttaatcgtat tagagtgaat cctaatactg atgcgttaat tgaatcttta tttatccagt
      481 ttcatagtca atgtttaaag caaaatctta ttgatggtac aaaagtagaa gctaatgcca
      541 ataggtatac atttgtgtgg aagaaaagta ttcaaaatca cgaatcgaaa ttgaacgaaa
      601 a
//
LOCUS       DALPQQ010000301          595 bp    DNA     linear   BCT 22-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus strain K18-6-464
            SAMD00233528-rid16434743.denovo.310, whole genome shotgun sequence.
ACCESSION   DALPQQ010000301 DALPQQ010000000
VERSION     DALPQQ010000301.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMD00233528
            Sequence Read Archive: DRR236061
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 595)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 595)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001543423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001543423.1
            Genome Coverage       :: 77x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/22/2022 17:09:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,811
            CDSs (total)                      :: 2,743
            Genes (coding)                    :: 2,689
            CDSs (with protein)               :: 2,689
            Genes (RNA)                       :: 68
            rRNAs                             :: 2, 4, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 4, 2 (16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 54
            CDSs (without protein)            :: 54
            Pseudo Genes (ambiguous residues) :: 0 of 54
            Pseudo Genes (frameshifted)       :: 27 of 54
            Pseudo Genes (incomplete)         :: 27 of 54
            Pseudo Genes (internal stop)      :: 10 of 54
            Pseudo Genes (multiple problems)  :: 10 of 54
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..595
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMD00233528-rid16434743.denovo.310"
                     /strain="K18-6-464"
                     /db_xref="taxon:1280"
                     /geo_loc_name="Japan: Niigata"
     gene            116..466
                     /gene="scb"
                     /locus_tag="O7798_002756"
     CDS             116..466
                     /gene="scb"
                     /locus_tag="O7798_002756"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499659.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="complement inhibitor SCIN-B"
                     /protein_id="HDC2864923.1"
                     /translation="MKFKKYILTGTLALLLSSTGIATIEGNKADASSLDKYLTESQFH
                     DKRIAEELRTLLNKSNVYALAAGSLNPYYKRTIMMNEYRAKAALKKNDFVSMADAKVA
                     LEKIYKEIDEIINR"
BASE COUNT          252 a           63 c           98 g          182 t
ORIGIN      
        1 aatgttatgt taatttttgt taatgaaaaa agtaatctat ttaatgacag gttaatgtaa
       61 ttgtcctgaa attgactata tactcagtaa gtatcaattt taaggagagc ttataatgaa
      121 atttaaaaaa tatatattaa caggaacatt agcattactt ttatcatcaa ctgggatagc
      181 aactatagaa gggaataaag cagatgcaag tagtctggac aaatatttaa ctgaaagtca
      241 gtttcatgat aaacgcatag cagaagaatt aagaacttta cttaacaaat cgaatgtata
      301 tgcattagct gcaggaagct taaatccata ttataaacgt acgattatga tgaatgaata
      361 tagagctaaa gcggcactta agaaaaatga tttcgtatca atggctgatg ctaaagttgc
      421 attagaaaaa atatacaaag aaattgatga aattataaat agataataaa taaaacaggt
      481 tgagacaaaa aatggtctta acctgttttc aatttgcata tgtgataaat tctatatcaa
      541 aatgcttatg tataatgaat gacatttaaa agtaggggag acaaatataa ataca
//
LOCUS       DALPQQ010000302          591 bp    DNA     linear   BCT 22-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus strain K18-6-464
            SAMD00233528-rid16434743.denovo.311, whole genome shotgun sequence.
ACCESSION   DALPQQ010000302 DALPQQ010000000
VERSION     DALPQQ010000302.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMD00233528
            Sequence Read Archive: DRR236061
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 591)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 591)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001543423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001543423.1
            Genome Coverage       :: 77x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/22/2022 17:09:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,811
            CDSs (total)                      :: 2,743
            Genes (coding)                    :: 2,689
            CDSs (with protein)               :: 2,689
            Genes (RNA)                       :: 68
            rRNAs                             :: 2, 4, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 4, 2 (16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 54
            CDSs (without protein)            :: 54
            Pseudo Genes (ambiguous residues) :: 0 of 54
            Pseudo Genes (frameshifted)       :: 27 of 54
            Pseudo Genes (incomplete)         :: 27 of 54
            Pseudo Genes (internal stop)      :: 10 of 54
            Pseudo Genes (multiple problems)  :: 10 of 54
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..591
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMD00233528-rid16434743.denovo.311"
                     /strain="K18-6-464"
                     /db_xref="taxon:1280"
                     /geo_loc_name="Japan: Niigata"
     gene            <1..245
                     /locus_tag="O7798_002757"
     CDS             <1..245
                     /locus_tag="O7798_002757"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498839.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDC2864924.1"
                     /translation="TIISFKTFEIKETVELSYDAVNRIVLKDGWLFRKMRIETMQKVL
                     KYGTSKLMLTDFQKENYNKYIQGQKQRVIFENGHFV"
BASE COUNT          217 a           92 c           94 g          188 t
ORIGIN      
        1 gcacgattat ttcattcaag acatttgaaa ttaaagaaac agtagaatta tcatatgatg
       61 ctgttaatcg tattgtgtta aaagatggat ggttatttag aaaaatgaga atagaaacaa
      121 tgcaaaaagt gttaaaatac ggtacatcta aattaatgtt aactgatttt caaaaagaga
      181 attataataa atatattcaa ggtcagaaac aacgcgtgat atttgaaaat ggccattttg
      241 tctaattgat agtgaatata attagagtaa gaggctggga cataaatccc taaaaaacag
      301 cagtaagata attttcaatt agaaaatatc ttactgctgt tctctattta tacaatactt
      361 cgtattgaat ggcttcgctt tcctagggtg ccgtctcagc ctcggtcttc gactggcact
      421 gctccctcag gagtctcgcc attaatacta cgtattaaca tgtaatttta ctttgaaata
      481 ctttaaaaaa ataagacact ttgcccaact tacactacca ataaaaactt ctgttagaat
      541 tcctcaaaat gatatttcgc gacatgttaa tgaaattgtt gaaacgatac c
//
LOCUS       DALPQQ010000303          589 bp    DNA     linear   BCT 22-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus strain K18-6-464
            SAMD00233528-rid16434743.denovo.312, whole genome shotgun sequence.
ACCESSION   DALPQQ010000303 DALPQQ010000000
VERSION     DALPQQ010000303.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMD00233528
            Sequence Read Archive: DRR236061
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 589)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 589)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001543423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001543423.1
            Genome Coverage       :: 77x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/22/2022 17:09:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,811
            CDSs (total)                      :: 2,743
            Genes (coding)                    :: 2,689
            CDSs (with protein)               :: 2,689
            Genes (RNA)                       :: 68
            rRNAs                             :: 2, 4, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 4, 2 (16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 54
            CDSs (without protein)            :: 54
            Pseudo Genes (ambiguous residues) :: 0 of 54
            Pseudo Genes (frameshifted)       :: 27 of 54
            Pseudo Genes (incomplete)         :: 27 of 54
            Pseudo Genes (internal stop)      :: 10 of 54
            Pseudo Genes (multiple problems)  :: 10 of 54
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..589
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMD00233528-rid16434743.denovo.312"
                     /strain="K18-6-464"
                     /db_xref="taxon:1280"
                     /geo_loc_name="Japan: Niigata"
     gene            complement(1..320)
                     /locus_tag="O7798_002758"
                     /pseudo
     CDS             complement(1..320)
                     /locus_tag="O7798_002758"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499364.1"
                     /note="frameshifted; incomplete; missing C-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DUF5067 domain-containing protein"
BASE COUNT          184 a           76 c           59 g          270 t
ORIGIN      
        1 agatggattt aaatctttat cgtctttttt agcagtaatt tccattttaa aagcgatata
       61 tttctttttc tcatcttttt cattgatgat aaacggttct tttattttag cttcaaattt
      121 gtcactaaca atagtatcgc ctttaatttt tatatccata tttttttgct tttaaattct
      181 ttaagttctt catttaattc ttcattgtca ttttctttct ttttgtgact agtgctctct
      241 ttttttgcac tatcttgatg atgtccacaa gcacctaaga taagtgtact tgctaataat
      301 atccccatta cttttttcat ttaacatgtc tcctttattt cgcaaaaatt tattttaaaa
      361 actctaaatg acttatcatt ttgagtaatt aaacaaagtt gatattttgt gagattctaa
      421 gatgatatta aataattctt gtaataatga tcctatgtat tgttgcaata aattaatgaa
      481 actataatta ctaatattat attactttta ttgatagaaa tatattactt ttttaaaaaa
      541 acttgtaata tatcgaaaga tttaaatgta aaattttgat ttgttaaga
//
LOCUS       DALPQQ010000304          585 bp    DNA     linear   BCT 22-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus strain K18-6-464
            SAMD00233528-rid16434743.denovo.313, whole genome shotgun sequence.
ACCESSION   DALPQQ010000304 DALPQQ010000000
VERSION     DALPQQ010000304.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMD00233528
            Sequence Read Archive: DRR236061
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 585)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 585)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001543423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001543423.1
            Genome Coverage       :: 77x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/22/2022 17:09:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,811
            CDSs (total)                      :: 2,743
            Genes (coding)                    :: 2,689
            CDSs (with protein)               :: 2,689
            Genes (RNA)                       :: 68
            rRNAs                             :: 2, 4, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 4, 2 (16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 54
            CDSs (without protein)            :: 54
            Pseudo Genes (ambiguous residues) :: 0 of 54
            Pseudo Genes (frameshifted)       :: 27 of 54
            Pseudo Genes (incomplete)         :: 27 of 54
            Pseudo Genes (internal stop)      :: 10 of 54
            Pseudo Genes (multiple problems)  :: 10 of 54
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..585
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMD00233528-rid16434743.denovo.313"
                     /strain="K18-6-464"
                     /db_xref="taxon:1280"
                     /geo_loc_name="Japan: Niigata"
     gene            181..430
                     /locus_tag="O7798_002759"
                     /pseudo
     CDS             181..430
                     /locus_tag="O7798_002759"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016187510.1"
                     /note="frameshifted; incomplete; partial in the middle of
                     a contig; missing C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="sphingomyelin phosphodiesterase"
BASE COUNT          231 a           78 c           70 g          206 t
ORIGIN      
        1 acttaaatgt cataacaaca ttcatttctt aattccgatt agatttgtcg attatattta
       61 cagcatcttt atactcaaaa aacatttact taaaaatata aattcgattt aataattaat
      121 ttaaatttag ttaatcaatt ttgcatctat tttgttgtaa gctatataaa aggagtgata
      181 atgatggtga aaaaaacaaa atccaattca ctaaaaaagt tgcaacactt gcattagcaa
      241 atttattatt agttggtgca cttactgaca atagtgccaa agccgaatct aagaaagatg
      301 atactgattt gaagttagtt agtcataacg tttatatgtt atcgaccgtt ttgtatccaa
      361 actggagact tttaacataa aattacttat cattcaaaaa gtaaaacagc ataatatcaa
      421 ggtttataac tttatcatta tcaataatac ctcatataaa ataaaatttt agggactttt
      481 tagggacttt aaatttaaaa ttacaagttt aatagaaaca tcaaaataat cacatgtttg
      541 tgtggaatgt acaccccaaa agctagactg aaaaatctat ttttt
//
LOCUS       DALPQQ010000305          572 bp    DNA     linear   BCT 22-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus strain K18-6-464
            SAMD00233528-rid16434743.denovo.314, whole genome shotgun sequence.
ACCESSION   DALPQQ010000305 DALPQQ010000000
VERSION     DALPQQ010000305.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMD00233528
            Sequence Read Archive: DRR236061
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 572)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 572)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001543423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001543423.1
            Genome Coverage       :: 77x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/22/2022 17:09:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,811
            CDSs (total)                      :: 2,743
            Genes (coding)                    :: 2,689
            CDSs (with protein)               :: 2,689
            Genes (RNA)                       :: 68
            rRNAs                             :: 2, 4, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 4, 2 (16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 54
            CDSs (without protein)            :: 54
            Pseudo Genes (ambiguous residues) :: 0 of 54
            Pseudo Genes (frameshifted)       :: 27 of 54
            Pseudo Genes (incomplete)         :: 27 of 54
            Pseudo Genes (internal stop)      :: 10 of 54
            Pseudo Genes (multiple problems)  :: 10 of 54
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..572
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMD00233528-rid16434743.denovo.314"
                     /strain="K18-6-464"
                     /db_xref="taxon:1280"
                     /geo_loc_name="Japan: Niigata"
     gene            207..>572
                     /locus_tag="O7798_002760"
     CDS             207..>572
                     /locus_tag="O7798_002760"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500400.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDC2864925.1"
                     /translation="MNKASFDKKVKKQLWFLNKKEKQALDQRLSSISDDDSVNLNKPV
                     TFANAYLRQNVFRNKETKSYSMFVTLVVMMFAYVALLGLFLFGLITSLSGVQFFVSPK
                     VDLSTTVVILTIIGAILLMF"
BASE COUNT          205 a           65 c           88 g          214 t
ORIGIN      
        1 aaaatttatc attgtaccta cctaaaaagc attagtttga aaaattagca gactgtattt
       61 tagcgtcaaa tcaccataaa tgaaattgta atatggattt ttgtagattt gatacatata
      121 tttctgtaaa atatataaaa tacactttca attgacgcta atgtttaaaa ttacgtcaat
      181 attataaagg agagaaatcc ttaattatga ataaagcatc atttgataaa aaagttaaaa
      241 agcaattatg gtttttgaac aagaaggaga aacaagcatt agatcaacga ttgtcttcta
      301 tatctgatga tgacagcgtt aacttaaata agcctgttac ctttgctaat gcttacttaa
      361 gacaaaatgt atttcgaaat aaagaaacaa aaagttatag tatgtttgtt acattagtag
      421 tgatgatgtt tgcttatgtt gctttattag gtttgttttt atttgggcta attacaagtc
      481 tatctggcgt acaatttttc gttagtccta aggtagattt atctacaact gttgttattt
      541 taacaattat tggagcgatt ttattaatgt tt
//
LOCUS       DALPQQ010000306          562 bp    DNA     linear   BCT 22-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus strain K18-6-464
            SAMD00233528-rid16434743.denovo.315, whole genome shotgun sequence.
ACCESSION   DALPQQ010000306 DALPQQ010000000
VERSION     DALPQQ010000306.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMD00233528
            Sequence Read Archive: DRR236061
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 562)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 562)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001543423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001543423.1
            Genome Coverage       :: 77x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/22/2022 17:09:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,811
            CDSs (total)                      :: 2,743
            Genes (coding)                    :: 2,689
            CDSs (with protein)               :: 2,689
            Genes (RNA)                       :: 68
            rRNAs                             :: 2, 4, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 4, 2 (16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 54
            CDSs (without protein)            :: 54
            Pseudo Genes (ambiguous residues) :: 0 of 54
            Pseudo Genes (frameshifted)       :: 27 of 54
            Pseudo Genes (incomplete)         :: 27 of 54
            Pseudo Genes (internal stop)      :: 10 of 54
            Pseudo Genes (multiple problems)  :: 10 of 54
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..562
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMD00233528-rid16434743.denovo.315"
                     /strain="K18-6-464"
                     /db_xref="taxon:1280"
                     /geo_loc_name="Japan: Niigata"
     gene            143..553
                     /locus_tag="O7798_002761"
     CDS             143..553
                     /locus_tag="O7798_002761"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000612779.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YolD-like family protein"
                     /protein_id="HDC2864926.1"
                     /translation="MIPNPNAPDEYKYETDYRKIPRKYLNPKIPQGRGKIKWQPFATL
                     PKQFEILEQIIMYQDKVEKPLLTYDSLDNLDQIFQVKIRNDELCKITYWEDGNISKYT
                     GKILKKDEISNTFSFSDTNNNIYNLNNANVCSIT"
BASE COUNT          235 a           77 c           72 g          178 t
ORIGIN      
        1 tgtaattata aatgctcgat aatcttactc aacttttcca tatagaaaat aacttatttt
       61 aaattaatta atcacattaa aaaattatat aatccttgcc ggataagaac atacgttcta
      121 taatgatgat gaggtggtta acatgattcc aaatcctaat gcgccagatg aatataaata
      181 tgaaactgat tatagaaaaa taccaagaaa atatttaaac cctaaaatcc ctcaagggcg
      241 tggaaaaatc aaatggcaac cttttgcgac tctcccaaaa cagtttgaaa ttttagagca
      301 aatcataatg tatcaagata aagttgaaaa accattgcta acatatgatt cattagataa
      361 tttagatcag attttccaag taaaaattag aaatgatgag ttatgtaaaa tcacatattg
      421 ggaagacggt aacatttcaa aatatacggg aaaaatttta aaaaaggatg aaattagtaa
      481 tacattttcc ttttctgata ctaacaataa tatatataat ttaaataatg ctaacgtttg
      541 tagtatcact taacactatt ta
//
LOCUS       DALPQQ010000307          552 bp    DNA     linear   BCT 22-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus strain K18-6-464
            SAMD00233528-rid16434743.denovo.316, whole genome shotgun sequence.
ACCESSION   DALPQQ010000307 DALPQQ010000000
VERSION     DALPQQ010000307.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMD00233528
            Sequence Read Archive: DRR236061
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 552)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 552)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001543423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001543423.1
            Genome Coverage       :: 77x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/22/2022 17:09:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,811
            CDSs (total)                      :: 2,743
            Genes (coding)                    :: 2,689
            CDSs (with protein)               :: 2,689
            Genes (RNA)                       :: 68
            rRNAs                             :: 2, 4, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 4, 2 (16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 54
            CDSs (without protein)            :: 54
            Pseudo Genes (ambiguous residues) :: 0 of 54
            Pseudo Genes (frameshifted)       :: 27 of 54
            Pseudo Genes (incomplete)         :: 27 of 54
            Pseudo Genes (internal stop)      :: 10 of 54
            Pseudo Genes (multiple problems)  :: 10 of 54
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..552
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMD00233528-rid16434743.denovo.316"
                     /strain="K18-6-464"
                     /db_xref="taxon:1280"
                     /geo_loc_name="Japan: Niigata"
     gene            77..159
                     /locus_tag="O7798_002762"
     tRNA            77..159
                     /locus_tag="O7798_002762"
                     /product="tRNA-Leu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:110..112,aa:Leu,seq:gag)
     gene            182..255
                     /locus_tag="O7798_002763"
     tRNA            182..255
                     /locus_tag="O7798_002763"
                     /product="tRNA-Gly"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:214..216,aa:Gly,seq:tcc)
     gene            374..>552
                     /locus_tag="O7798_002764"
     rRNA            374..>552
                     /locus_tag="O7798_002764"
                     /product="16S ribosomal RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00177"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00177"
BASE COUNT          173 a          104 c          125 g          150 t
ORIGIN      
        1 ttattgacaa atatttttaa acataatata ataaataacg ttctgaaaaa cgaagatgtt
       61 ttaaatgcct atatccgcgg tcgtggcgga atggcagacg cgctaggttg agggcctagt
      121 gggagaaatc ccgtggaggt tcaagtcctc tcggccgcat caaaattctt aatttaaata
      181 agcgggtgta gtttaatggc aaaacctcag ccttccaagc tgatgttgtg ggttcgattc
      241 ccatcacccg ctccatagat aattttaatg aacattgaaa actgaatgac aatatgtcaa
      301 cgttaattcc aaaaacgtaa ctataagtta caaacattat ttagtattta tgagctaatc
      361 aaacatcata atttttatgg agagtttgat cctggctcag gatgaacgct ggcggcgtgc
      421 ctaatacatg caagtcgagc gaacggacga gaagcttgct tctctgatgt tagcggcgga
      481 cgggtgagta acacgtggat aacctaccta taagactggg ataacttcgg gaaaccggag
      541 ctaataccgg at
//
LOCUS       DALPQQ010000308          533 bp    DNA     linear   BCT 22-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus strain K18-6-464
            SAMD00233528-rid16434743.denovo.317, whole genome shotgun sequence.
ACCESSION   DALPQQ010000308 DALPQQ010000000
VERSION     DALPQQ010000308.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMD00233528
            Sequence Read Archive: DRR236061
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 533)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 533)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001543423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001543423.1
            Genome Coverage       :: 77x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/22/2022 17:09:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,811
            CDSs (total)                      :: 2,743
            Genes (coding)                    :: 2,689
            CDSs (with protein)               :: 2,689
            Genes (RNA)                       :: 68
            rRNAs                             :: 2, 4, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 4, 2 (16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 54
            CDSs (without protein)            :: 54
            Pseudo Genes (ambiguous residues) :: 0 of 54
            Pseudo Genes (frameshifted)       :: 27 of 54
            Pseudo Genes (incomplete)         :: 27 of 54
            Pseudo Genes (internal stop)      :: 10 of 54
            Pseudo Genes (multiple problems)  :: 10 of 54
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..533
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMD00233528-rid16434743.denovo.317"
                     /strain="K18-6-464"
                     /db_xref="taxon:1280"
                     /geo_loc_name="Japan: Niigata"
     gene            271..533
                     /locus_tag="O7798_002765"
                     /pseudo
     CDS             271..533
                     /locus_tag="O7798_002765"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000277741.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
BASE COUNT          220 a           76 c           71 g          166 t
ORIGIN      
        1 tgtaatttta ctttgaaata ctttaaaaaa ataagacact ttgcccaact tgcacataaa
       61 tgtaaaattc aataaaataa attttctgtg ttggatccct tcgtataatt taataaatac
      121 tactaaacta aattaacgag gtgccttatg tataaaaatt ataacatgac ccaacttaca
      181 ctaccaatag aaacttctgt tagaattcct caaaatgata atacgcgata tgttaatgaa
      241 attgttgaaa cgatatctga tagcgaattc gatgaattta tatgtcctaa taacaaaaga
      301 ataggtttta aaagatatgc ataccgtaat gatagatata gttttaaacg tgacttcaag
      361 ctatatgaat gtgatgactg ttcatcatgt tctttgagac atcaatgcat gaagccaaat
      421 tcgaaatcca ataagaaaat tatgaagaat tataattggg aatactttaa agcccaaatt
      481 aatcaaaagc tttctgaacc agaaacgaaa aaatctatag tcaaagaaaa att
//
LOCUS       DALPQQ010000309          526 bp    DNA     linear   BCT 22-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus strain K18-6-464
            SAMD00233528-rid16434743.denovo.318, whole genome shotgun sequence.
ACCESSION   DALPQQ010000309 DALPQQ010000000
VERSION     DALPQQ010000309.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMD00233528
            Sequence Read Archive: DRR236061
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 526)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 526)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001543423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001543423.1
            Genome Coverage       :: 77x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/22/2022 17:09:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,811
            CDSs (total)                      :: 2,743
            Genes (coding)                    :: 2,689
            CDSs (with protein)               :: 2,689
            Genes (RNA)                       :: 68
            rRNAs                             :: 2, 4, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 4, 2 (16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 54
            CDSs (without protein)            :: 54
            Pseudo Genes (ambiguous residues) :: 0 of 54
            Pseudo Genes (frameshifted)       :: 27 of 54
            Pseudo Genes (incomplete)         :: 27 of 54
            Pseudo Genes (internal stop)      :: 10 of 54
            Pseudo Genes (multiple problems)  :: 10 of 54
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..526
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMD00233528-rid16434743.denovo.318"
                     /strain="K18-6-464"
                     /db_xref="taxon:1280"
                     /geo_loc_name="Japan: Niigata"
     gene            31..>526
                     /locus_tag="O7798_002766"
     CDS             31..>526
                     /locus_tag="O7798_002766"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501278.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HDC2864927.1"
                     /translation="MDVLTIEHLTKKIGNKTILEDVSFKLKRGQIVGLVGANGAGKTT
                     LMKVILGYSSFQSGNFNVINSKDSKSNIGALIENPGIYPFMSGYENLKLLNESKNTQD
                     IDKIVSQLHMDEYIHKKAKTYSLGMKQKLGIAIAFLNKPQFIILDEPMNGLDPKAVRD
                     VRELI"
BASE COUNT          204 a           71 c           98 g          153 t
ORIGIN      
        1 agattattta atagcaaagg agatagtgat atggatgttt taacaataga acatttaaca
       61 aagaagatag gcaacaaaac gattctcgaa gatgtatcat ttaagctgaa acgcggacaa
      121 atagttggtc tcgttggagc gaatggtgca ggtaaaacaa ctttaatgaa agttatatta
      181 ggttactcta gtttccaaag cgggaatttt aatgttatta acagcaagga cagcaaaagc
      241 aatatcggcg cattgattga aaatccagga atatatcctt ttatgtctgg atatgaaaac
      301 ttgaagttat tgaatgaatc aaaaaacact caagatatcg ataaaattgt ctcacaactt
      361 catatggatg aatacattca taaaaaagct aaaacgtatt ctcttggtat gaaacaaaaa
      421 ttaggaattg ctatagcatt tttaaataaa cctcaattca ttatcttaga tgaaccaatg
      481 aatggcttag atccaaaagc tgtgcgagat gtacgtgaat tgattg
//
LOCUS       DALPQQ010000310          514 bp    DNA     linear   BCT 22-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus strain K18-6-464
            SAMD00233528-rid16434743.denovo.320, whole genome shotgun sequence.
ACCESSION   DALPQQ010000310 DALPQQ010000000
VERSION     DALPQQ010000310.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMD00233528
            Sequence Read Archive: DRR236061
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 514)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 514)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001543423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001543423.1
            Genome Coverage       :: 77x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/22/2022 17:09:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,811
            CDSs (total)                      :: 2,743
            Genes (coding)                    :: 2,689
            CDSs (with protein)               :: 2,689
            Genes (RNA)                       :: 68
            rRNAs                             :: 2, 4, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 4, 2 (16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 54
            CDSs (without protein)            :: 54
            Pseudo Genes (ambiguous residues) :: 0 of 54
            Pseudo Genes (frameshifted)       :: 27 of 54
            Pseudo Genes (incomplete)         :: 27 of 54
            Pseudo Genes (internal stop)      :: 10 of 54
            Pseudo Genes (multiple problems)  :: 10 of 54
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..514
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMD00233528-rid16434743.denovo.320"
                     /strain="K18-6-464"
                     /db_xref="taxon:1280"
                     /geo_loc_name="Japan: Niigata"
     gene            2..199
                     /locus_tag="O7798_002767"
     CDS             2..199
                     /locus_tag="O7798_002767"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020219857.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDC2864928.1"
                     /translation="METIISEIEKLLTNNTPYSISKNSGVPRQTVTDLKVGKTKIKEA
                     KFKTIIKLYEYQRTLENKTEC"
BASE COUNT          211 a           58 c           69 g          176 t
ORIGIN      
        1 gattgaaact attataagtg aaatagaaaa gttattaact aacaatacac catatagtat
       61 ttcaaaaaac tcaggtgtac cacgtcaaac agttactgat ttaaaggtag gtaaaactaa
      121 aataaaagaa gctaaattta aaacgataat caagttatat gaatatcaaa gaacattaga
      181 aaataaaaca gaatgttaac aaaaatattt tgttaggtta ggtggacaag aaattaaatt
      241 tctaatgatt tcatggttgt ctgtccacgt tttgtccacc tcaataagat aatctcttag
      301 ttttagaaat tgtacatggt taaataatca aaaatgcata ttatgaaatt atcattgcca
      361 ttaaatcttg aatgatcttt aagcgatgat ataaaaggct gaacacagta aataagttaa
      421 ctttaatgca gtattctata ctatacatat tttgtaataa tgtttatgca cataattttt
      481 cattgacaat tttttatatt aaattgtgta attg
//
LOCUS       DALPQQ010000311          507 bp    DNA     linear   BCT 22-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus strain K18-6-464
            SAMD00233528-rid16434743.denovo.321, whole genome shotgun sequence.
ACCESSION   DALPQQ010000311 DALPQQ010000000
VERSION     DALPQQ010000311.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMD00233528
            Sequence Read Archive: DRR236061
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 507)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 507)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001543423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001543423.1
            Genome Coverage       :: 77x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/22/2022 17:09:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,811
            CDSs (total)                      :: 2,743
            Genes (coding)                    :: 2,689
            CDSs (with protein)               :: 2,689
            Genes (RNA)                       :: 68
            rRNAs                             :: 2, 4, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 4, 2 (16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 54
            CDSs (without protein)            :: 54
            Pseudo Genes (ambiguous residues) :: 0 of 54
            Pseudo Genes (frameshifted)       :: 27 of 54
            Pseudo Genes (incomplete)         :: 27 of 54
            Pseudo Genes (internal stop)      :: 10 of 54
            Pseudo Genes (multiple problems)  :: 10 of 54
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..507
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMD00233528-rid16434743.denovo.321"
                     /strain="K18-6-464"
                     /db_xref="taxon:1280"
                     /geo_loc_name="Japan: Niigata"
     gene            <1..427
                     /locus_tag="O7798_002768"
     CDS             <1..427
                     /locus_tag="O7798_002768"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501339.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HDC2864929.1"
                     /translation="SIQKNEFNIKIDRDDQPDLENIEHNYLNNGGQFWLAINNHQNIV
                     GTIGLIRLDNNMSALKKMFVDKGYRNLKIGKKLLDKVIMTCKEQNIDGIYLGTIDKFI
                     SAQYFYSNNGFREIKRGDLPSSFPKLDVDNRFYYRNLKD"
BASE COUNT          207 a           46 c           81 g          173 t
ORIGIN      
        1 atcgattcaa aaaaatgaat ttaatataaa aattgataga gatgatcaac ctgatttgga
       61 gaacatcgaa cataactatt tgaataatgg agggcaattt tggcttgcaa taaacaatca
      121 tcaaaatatt gttggtacta taggtttgat tagactagat aataatatgt ctgcacttaa
      181 aaaaatgttt gttgataaag gttataggaa tttaaaaata ggtaaaaaac ttttagataa
      241 agttataatg acatgtaaag aacaaaatat cgatggtatt tatttaggaa caattgataa
      301 atttattagt gcacagtatt tttattctaa taatggcttc cgtgaaatta agcgaggaga
      361 tttaccaagt agttttccta aattagatgt agataatagg ttttattaca gaaatttaaa
      421 agattaattc gatgcaataa taattgatat gacaatctta gtaatattca ttttaaaagt
      481 gacacatagc gtttaaatat aaagtct
//
LOCUS       DALPQQ010000312          507 bp    DNA     linear   BCT 22-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus strain K18-6-464
            SAMD00233528-rid16434743.denovo.322, whole genome shotgun sequence.
ACCESSION   DALPQQ010000312 DALPQQ010000000
VERSION     DALPQQ010000312.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMD00233528
            Sequence Read Archive: DRR236061
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 507)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 507)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001543423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001543423.1
            Genome Coverage       :: 77x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/22/2022 17:09:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,811
            CDSs (total)                      :: 2,743
            Genes (coding)                    :: 2,689
            CDSs (with protein)               :: 2,689
            Genes (RNA)                       :: 68
            rRNAs                             :: 2, 4, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 4, 2 (16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 54
            CDSs (without protein)            :: 54
            Pseudo Genes (ambiguous residues) :: 0 of 54
            Pseudo Genes (frameshifted)       :: 27 of 54
            Pseudo Genes (incomplete)         :: 27 of 54
            Pseudo Genes (internal stop)      :: 10 of 54
            Pseudo Genes (multiple problems)  :: 10 of 54
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..507
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMD00233528-rid16434743.denovo.322"
                     /strain="K18-6-464"
                     /db_xref="taxon:1280"
                     /geo_loc_name="Japan: Niigata"
     gene            <1..177
                     /locus_tag="O7798_002769"
     CDS             <1..177
                     /locus_tag="O7798_002769"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000882177.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF443 family protein"
                     /protein_id="HDC2864930.1"
                     /translation="LGGGSFFTIYMLLTIEVQNIILFITLFVIFLFFLFLNMCSLYDN
                     KVHVLFKSNGIEKF"
     gene            214..>507
                     /locus_tag="O7798_002770"
     CDS             214..>507
                     /locus_tag="O7798_002770"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499163.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF443 family protein"
                     /protein_id="HDC2864931.1"
                     /translation="MLCESKVINKNPKYRVIKYGDEYLMIDLVSTWLTLFLPMINWLI
                     PKKYVKISKKEFDDLNIVKPVKNKAFWPVAGSTILFGVTFRKYIPSLNIQLEKN"
BASE COUNT          187 a           48 c           73 g          199 t
ORIGIN      
        1 ttaggtggtg gttcattctt tactatttat atgttattga cgattgaagt tcaaaatata
       61 atattattta taactttgtt tgtaatattt ttgtttttct tatttttaaa tatgtgctca
      121 ctatatgaca ataaagttca tgtattattt aaatcaaatg gaattgaaaa gttttaatag
      181 gaataataaa caaaggaatg gtagtgataa atattgctat gtgaatctaa agttatcaac
      241 aaaaatccta agtatagagt tattaaatat ggtgatgaat atttaatgat tgatttagta
      301 agtacctggt taactttatt tcttcctatg attaattggt taattccaaa aaaatatgtc
      361 aaaatcagta aaaaagaatt tgacgattta aacattgtca aacctgttaa aaataaagct
      421 ttttggccag ttgcaggtag tactattttg ttcggagtta catttagaaa atatattcct
      481 tcacttaata ttcaattaga gaaaaac
//
LOCUS       DALPQQ010000313          502 bp    DNA     linear   BCT 22-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus strain K18-6-464
            SAMD00233528-rid16434743.denovo.323, whole genome shotgun sequence.
ACCESSION   DALPQQ010000313 DALPQQ010000000
VERSION     DALPQQ010000313.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMD00233528
            Sequence Read Archive: DRR236061
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 502)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 502)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001543423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001543423.1
            Genome Coverage       :: 77x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/22/2022 17:09:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,811
            CDSs (total)                      :: 2,743
            Genes (coding)                    :: 2,689
            CDSs (with protein)               :: 2,689
            Genes (RNA)                       :: 68
            rRNAs                             :: 2, 4, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 4, 2 (16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 54
            CDSs (without protein)            :: 54
            Pseudo Genes (ambiguous residues) :: 0 of 54
            Pseudo Genes (frameshifted)       :: 27 of 54
            Pseudo Genes (incomplete)         :: 27 of 54
            Pseudo Genes (internal stop)      :: 10 of 54
            Pseudo Genes (multiple problems)  :: 10 of 54
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..502
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMD00233528-rid16434743.denovo.323"
                     /strain="K18-6-464"
                     /db_xref="taxon:1280"
                     /geo_loc_name="Japan: Niigata"
     gene            complement(263..361)
                     /locus_tag="O7798_002771"
                     /pseudo
     CDS             complement(263..361)
                     /locus_tag="O7798_002771"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000429703.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="head morphogenesis protein"
     gene            complement(337..459)
                     /locus_tag="O7798_002772"
     CDS             complement(337..459)
                     /locus_tag="O7798_002772"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499829.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDC2864932.1"
                     /translation="MKVIFYCPKRADDILKASMEYQSTDYKRRYISWKTMIAMK"
BASE COUNT          166 a           81 c           62 g          193 t
ORIGIN      
        1 atttttcaat atggctatca ttaatgatat taatatgcgt aaaatattta gcacaaaatt
       61 tactcactat tttaccatga aacctatttg acttggtaat aaattttact tgtcccttat
      121 tagtaacgat tgtcattgat tttattgatg gatgcttaaa aaatgtaaat aaatcatatt
      181 ctgaaaatcc tgactgtcca ggatggttat gtaacataac aattgaattc ggtttactgt
      241 taaataataa ttcggttgct tgttaccctg gcacaaaaga tacactatct tgattgacat
      301 atacttttgt aaatttacca tcttttaaca aataagctac ttcattgcta tcattgtttt
      361 ccatgagata tacctccgtt tatagtctgt cgactgatat tccatacttg cttttaaaat
      421 gtcatcagca cgttttggac aataaaaaat aaccttcaca tttgaaggtt aaaattttta
      481 aagtaaactt tctttatccc ca
//
LOCUS       DALPQQ010000314          494 bp    DNA     linear   BCT 22-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus strain K18-6-464
            SAMD00233528-rid16434743.denovo.324, whole genome shotgun sequence.
ACCESSION   DALPQQ010000314 DALPQQ010000000
VERSION     DALPQQ010000314.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMD00233528
            Sequence Read Archive: DRR236061
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 494)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 494)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001543423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001543423.1
            Genome Coverage       :: 77x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/22/2022 17:09:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,811
            CDSs (total)                      :: 2,743
            Genes (coding)                    :: 2,689
            CDSs (with protein)               :: 2,689
            Genes (RNA)                       :: 68
            rRNAs                             :: 2, 4, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 4, 2 (16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 54
            CDSs (without protein)            :: 54
            Pseudo Genes (ambiguous residues) :: 0 of 54
            Pseudo Genes (frameshifted)       :: 27 of 54
            Pseudo Genes (incomplete)         :: 27 of 54
            Pseudo Genes (internal stop)      :: 10 of 54
            Pseudo Genes (multiple problems)  :: 10 of 54
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..494
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMD00233528-rid16434743.denovo.324"
                     /strain="K18-6-464"
                     /db_xref="taxon:1280"
                     /geo_loc_name="Japan: Niigata"
     gene            81..>494
                     /locus_tag="O7798_002773"
     CDS             81..>494
                     /locus_tag="O7798_002773"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_032495458.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HDC2864933.1"
                     /translation="MTQVHFTLKSEEIQSIIEYSVKDDVSKNILTTVFNQLMENQRTE
                     YIQAKEYERTENRQSQRNGYYERSFTTRVGTLELKVPRTRDGHFSPTVFERYQRNEKA
                     LMASMLEMYVSGVSTRKVSKIVEELCGKSVSKSFVS"
BASE COUNT          186 a           90 c           88 g          130 t
ORIGIN      
        1 taaaagtaaa aaggccatat aacagtcctt ttacggtaca atgtttttaa cgacaaaaac
       61 atacccagga ggacttttac atgacccaag tacattttac actgaaaagc gaagagattc
      121 aaagcattat tgaatattct gtaaaggatg acgtttctaa aaatatttta acaacggtat
      181 ttaatcaact aatggaaaat caacgaacag aatatattca agcaaaagaa tatgaacgaa
      241 cagaaaaccg acaaagtcaa cgaaatggct attatgagcg cagctttacg acacgtgtag
      301 gcacgctaga attaaaagta cccagaacac gtgatggcca tttttcaccc acagtgtttg
      361 aacgttatca acgaaacgaa aaagccctca tggcttcaat gttggaaatg tatgtatcag
      421 gcgtttcaac tcgtaaagta tcaaaaattg tggaagaact ttgtggtaaa tccgtctcta
      481 agtccttcgt ttct
//
LOCUS       DALPQQ010000315          470 bp    DNA     linear   BCT 22-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus strain K18-6-464
            SAMD00233528-rid16434743.denovo.325, whole genome shotgun sequence.
ACCESSION   DALPQQ010000315 DALPQQ010000000
VERSION     DALPQQ010000315.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMD00233528
            Sequence Read Archive: DRR236061
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 470)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 470)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001543423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001543423.1
            Genome Coverage       :: 77x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/22/2022 17:09:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,811
            CDSs (total)                      :: 2,743
            Genes (coding)                    :: 2,689
            CDSs (with protein)               :: 2,689
            Genes (RNA)                       :: 68
            rRNAs                             :: 2, 4, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 4, 2 (16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 54
            CDSs (without protein)            :: 54
            Pseudo Genes (ambiguous residues) :: 0 of 54
            Pseudo Genes (frameshifted)       :: 27 of 54
            Pseudo Genes (incomplete)         :: 27 of 54
            Pseudo Genes (internal stop)      :: 10 of 54
            Pseudo Genes (multiple problems)  :: 10 of 54
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..470
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMD00233528-rid16434743.denovo.325"
                     /strain="K18-6-464"
                     /db_xref="taxon:1280"
                     /geo_loc_name="Japan: Niigata"
BASE COUNT          127 a          106 c           63 g          174 t
ORIGIN      
        1 aagatattag acataaaatc taaaaacagc agtaagatga tttatgatta aaaactatct
       61 tactgctgtt cactttttat aatacttctg aatgtcttca cttatacttc tagtcacaga
      121 tttaaataat caaaagtgca cattattaaa atatcaattt cacactcaat gcggctcatc
      181 gcattcattt cttgtctagc aacgttctac tctagcggaa cgtaagttag ctaccatcct
      241 cgctaagaac ctttcttgac ttgtgacaat cgcttgcttc tttcctcttc ttcggctctc
      301 gcttactcat ttagctctac taaactcgtt gcgctctttt ctcgtttcgt cagattcaaa
      361 cgttttcact tcgccaagcc atttttcttt gtgtttgctt tttattttga cgttttagac
      421 ataaaaaaaa gagaccttgc ggtctcaatg cggctcatcg catccatttt
//
LOCUS       DALPQQ010000316          467 bp    DNA     linear   BCT 22-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus strain K18-6-464
            SAMD00233528-rid16434743.denovo.326, whole genome shotgun sequence.
ACCESSION   DALPQQ010000316 DALPQQ010000000
VERSION     DALPQQ010000316.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMD00233528
            Sequence Read Archive: DRR236061
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 467)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 467)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001543423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001543423.1
            Genome Coverage       :: 77x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/22/2022 17:09:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,811
            CDSs (total)                      :: 2,743
            Genes (coding)                    :: 2,689
            CDSs (with protein)               :: 2,689
            Genes (RNA)                       :: 68
            rRNAs                             :: 2, 4, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 4, 2 (16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 54
            CDSs (without protein)            :: 54
            Pseudo Genes (ambiguous residues) :: 0 of 54
            Pseudo Genes (frameshifted)       :: 27 of 54
            Pseudo Genes (incomplete)         :: 27 of 54
            Pseudo Genes (internal stop)      :: 10 of 54
            Pseudo Genes (multiple problems)  :: 10 of 54
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..467
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMD00233528-rid16434743.denovo.326"
                     /strain="K18-6-464"
                     /db_xref="taxon:1280"
                     /geo_loc_name="Japan: Niigata"
BASE COUNT          154 a           77 c           72 g          164 t
ORIGIN      
        1 actattatgt tttgacatta aatatgaact taattattca tttatcatat ttaagatgac
       61 attaaaaatt aggaaagcag gctggaacat aaatccctaa aaagacagta gtaagatatt
      121 ttctaattaa aaattatctt actgctgttc tctatttata caatacttcg tattgaatgg
      181 cttcgctatg cccatctggc acattactgt aaaattctat aaatagaatt tttgatgatg
      241 ggtcccttcc tagggtgccg tctcagcctc ggtcttcgac tggcactgct ccctcaggag
      301 tctcgccatt aatactacgt attaacatgt aattttactt ttaaatactt taaaaaaata
      361 agacatgaat cgtctacact taattggaca aattctatga gaatagatat tgttaattta
      421 agaaagtagg ctattttgag tttcactcga atgtcagttc gaggaat
//
LOCUS       DALPQQ010000317          464 bp    DNA     linear   BCT 22-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus strain K18-6-464
            SAMD00233528-rid16434743.denovo.327, whole genome shotgun sequence.
ACCESSION   DALPQQ010000317 DALPQQ010000000
VERSION     DALPQQ010000317.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMD00233528
            Sequence Read Archive: DRR236061
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 464)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 464)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001543423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001543423.1
            Genome Coverage       :: 77x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/22/2022 17:09:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,811
            CDSs (total)                      :: 2,743
            Genes (coding)                    :: 2,689
            CDSs (with protein)               :: 2,689
            Genes (RNA)                       :: 68
            rRNAs                             :: 2, 4, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 4, 2 (16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 54
            CDSs (without protein)            :: 54
            Pseudo Genes (ambiguous residues) :: 0 of 54
            Pseudo Genes (frameshifted)       :: 27 of 54
            Pseudo Genes (incomplete)         :: 27 of 54
            Pseudo Genes (internal stop)      :: 10 of 54
            Pseudo Genes (multiple problems)  :: 10 of 54
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..464
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMD00233528-rid16434743.denovo.327"
                     /strain="K18-6-464"
                     /db_xref="taxon:1280"
                     /geo_loc_name="Japan: Niigata"
     gene            complement(279..>464)
                     /locus_tag="O7798_002774"
     CDS             complement(279..>464)
                     /locus_tag="O7798_002774"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014614133.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L28"
                     /protein_id="HDC2864934.1"
                     /translation="GKQCFVTGRKASTGNRRSHALNSTKRRWNANLQKVRILVDGKPK
                     KVWVSARALKSGKVTRV"
BASE COUNT          151 a           73 c           79 g          161 t
ORIGIN      
        1 gtaattaatg aagattatgg cgtgatttat tattgaaagg aaaattgtag gtcctagtac
       61 attgatttat gtgccaaaat cgatattgaa cccataagtc caatttgaca gagaaccatt
      121 attaaacgta ttaaccaaat tatattgata gttcgaattt cactatgaac cattatgtat
      181 tgtttggtaa caaaaaaaga actaagaggt tgagctctta gttcttaagt aaatgtgtcc
      241 tccacataag gtcacatttt ttatgtgcaa tatatttatt aaactctagt tactttacca
      301 gattttaaag cacgtgcaga aacccaaact tttttaggtt taccgtcaac taggattcta
      361 actttttgaa ggttagcgtt ccatctacgt ttagtagagt ttaaagcgtg tgaacgtctg
      421 ttaccagtcg aagctttacg acctgttacg aaacattgtt tacc
//
LOCUS       DALPQQ010000318          461 bp    DNA     linear   BCT 22-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus strain K18-6-464
            SAMD00233528-rid16434743.denovo.328, whole genome shotgun sequence.
ACCESSION   DALPQQ010000318 DALPQQ010000000
VERSION     DALPQQ010000318.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMD00233528
            Sequence Read Archive: DRR236061
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 461)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 461)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001543423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001543423.1
            Genome Coverage       :: 77x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/22/2022 17:09:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,811
            CDSs (total)                      :: 2,743
            Genes (coding)                    :: 2,689
            CDSs (with protein)               :: 2,689
            Genes (RNA)                       :: 68
            rRNAs                             :: 2, 4, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 4, 2 (16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 54
            CDSs (without protein)            :: 54
            Pseudo Genes (ambiguous residues) :: 0 of 54
            Pseudo Genes (frameshifted)       :: 27 of 54
            Pseudo Genes (incomplete)         :: 27 of 54
            Pseudo Genes (internal stop)      :: 10 of 54
            Pseudo Genes (multiple problems)  :: 10 of 54
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..461
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMD00233528-rid16434743.denovo.328"
                     /strain="K18-6-464"
                     /db_xref="taxon:1280"
                     /geo_loc_name="Japan: Niigata"
     gene            33..182
                     /locus_tag="O7798_002775"
     CDS             33..182
                     /locus_tag="O7798_002775"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001804008.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pathogenicity island protein"
                     /protein_id="HDC2864935.1"
                     /translation="MNNFESYEHTEYVDGIEVVSEISREKHLELIMKWCAQELKNNFQ
                     LEKGE"
     gene            185..>461
                     /locus_tag="O7798_002776"
     CDS             185..>461
                     /locus_tag="O7798_002776"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001103931.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1474 family protein"
                     /protein_id="HDC2864936.1"
                     /translation="MNWEIKDLMCDIEVIKEKINDVAIKHGWFVEDKFVKNELETKQE
                     HINFSASYLEHRIQNEHTVELLQVYLKEFGELIQKFHEIEKASSDVSL"
BASE COUNT          188 a           42 c           91 g          140 t
ORIGIN      
        1 aacacgtggt ttatcaactt gagttaagta tcatgaataa ttttgaaagt tatgaacaca
       61 cggaatatgt tgatggtatt gaagtggttt cagagatcag tcgtgaaaag cacttagaat
      121 tgataatgaa atggtgcgca caagaattaa agaataattt tcaattagaa aaaggagaat
      181 aaatatgaat tgggaaatta aagatttgat gtgtgatatt gaagtgataa aagaaaaaat
      241 caatgatgta gctatcaaac atggttggtt tgttgaagat aaatttgtca aaaatgaatt
      301 agaaacaaaa caggaacata ttaatttttc tgctagctat ttagaacatc gtatacaaaa
      361 tgaacataca gttgagttat tacaggtgta cttaaaagaa ttcggtgaac ttatacaaaa
      421 gtttcatgaa atagaaaaag catcatctga tgtaagtttg g
//
LOCUS       DALPQQ010000319          457 bp    DNA     linear   BCT 22-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus strain K18-6-464
            SAMD00233528-rid16434743.denovo.329, whole genome shotgun sequence.
ACCESSION   DALPQQ010000319 DALPQQ010000000
VERSION     DALPQQ010000319.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMD00233528
            Sequence Read Archive: DRR236061
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 457)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 457)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001543423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001543423.1
            Genome Coverage       :: 77x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/22/2022 17:09:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,811
            CDSs (total)                      :: 2,743
            Genes (coding)                    :: 2,689
            CDSs (with protein)               :: 2,689
            Genes (RNA)                       :: 68
            rRNAs                             :: 2, 4, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 4, 2 (16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 54
            CDSs (without protein)            :: 54
            Pseudo Genes (ambiguous residues) :: 0 of 54
            Pseudo Genes (frameshifted)       :: 27 of 54
            Pseudo Genes (incomplete)         :: 27 of 54
            Pseudo Genes (internal stop)      :: 10 of 54
            Pseudo Genes (multiple problems)  :: 10 of 54
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..457
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMD00233528-rid16434743.denovo.329"
                     /strain="K18-6-464"
                     /db_xref="taxon:1280"
                     /geo_loc_name="Japan: Niigata"
     gene            <1..290
                     /locus_tag="O7798_002777"
     CDS             <1..290
                     /locus_tag="O7798_002777"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499807.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="glycerol-3-phosphate responsive antiterminator"
                     /protein_id="HDC2864937.1"
                     /translation="KSKVIKKAKSLNTLTIFRVFIIDSQALKRSIDLIKKVEPDFVEV
                     LPGVASKAIHHIQKETNTQVIAGGLINTIDEVNEAVKNGAKYVTTSYDKLW"
BASE COUNT          190 a           56 c           71 g          140 t
ORIGIN      
        1 ctaaatctaa agtaataaaa aaagctaaat cattaaatac tttaacgatt tttagagtat
       61 ttattattga tagtcaagca ttgaaacgca gtatagattt gataaaaaaa gttgaacctg
      121 attttgttga agtacttcca ggtgttgcga gtaaagcgat tcatcatatt cagaaagaaa
      181 caaacacaca agtcattgca ggtggcctaa ttaatacaat agatgaagtc aatgaagctg
      241 ttaaaaatgg agcgaaatat gtaactacta gttatgataa actttggtaa atcataagtc
      301 tgcaaaaatt tcatttttca cgagatttag tcatataaca taataaaaaa gccgttttca
      361 tatgggatat gcagtaggta tcaaacaaaa aataatcaaa taaaataatt agcacctcta
      421 aaacgattaa aatcattaaa gttttagagg tgtttat
//
LOCUS       DALPQQ010000320          411 bp    DNA     linear   BCT 22-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus strain K18-6-464
            SAMD00233528-rid16434743.denovo.330, whole genome shotgun sequence.
ACCESSION   DALPQQ010000320 DALPQQ010000000
VERSION     DALPQQ010000320.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMD00233528
            Sequence Read Archive: DRR236061
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 411)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 411)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001543423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001543423.1
            Genome Coverage       :: 77x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/22/2022 17:09:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,811
            CDSs (total)                      :: 2,743
            Genes (coding)                    :: 2,689
            CDSs (with protein)               :: 2,689
            Genes (RNA)                       :: 68
            rRNAs                             :: 2, 4, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 4, 2 (16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 54
            CDSs (without protein)            :: 54
            Pseudo Genes (ambiguous residues) :: 0 of 54
            Pseudo Genes (frameshifted)       :: 27 of 54
            Pseudo Genes (incomplete)         :: 27 of 54
            Pseudo Genes (internal stop)      :: 10 of 54
            Pseudo Genes (multiple problems)  :: 10 of 54
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..411
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMD00233528-rid16434743.denovo.330"
                     /strain="K18-6-464"
                     /db_xref="taxon:1280"
                     /geo_loc_name="Japan: Niigata"
BASE COUNT          179 a           53 c           50 g          129 t
ORIGIN      
        1 gtttcagtga aatcacaatc aatcatgtat tttcactgaa atatattata ttaaaaagaa
       61 acctaaaaac attacaaata acaataacaa atttcaaccg ataagataaa atgtcttgtc
      121 ggtttttaat ataacaagtg atattttgga aatgccaaaa atatatagat tgtttatata
      181 aaattattta aaatgtttta taacaacata ttttatgcaa cacataaaat gggtaactaa
      241 catcacgaaa tcattgtatt tgttgttaca ctgatgaagc gatgtcacaa agaaatgtcg
      301 ttatcaaacg aagcccgaaa tacatactga tactcgaaat aatgtaacga taaataacaa
      361 tgataacgat tgattactac gcaaaaatat atgtaaattg acgatttaaa t
//
LOCUS       DALPQQ010000321          387 bp    DNA     linear   BCT 22-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus strain K18-6-464
            SAMD00233528-rid16434743.denovo.333, whole genome shotgun sequence.
ACCESSION   DALPQQ010000321 DALPQQ010000000
VERSION     DALPQQ010000321.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMD00233528
            Sequence Read Archive: DRR236061
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 387)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 387)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001543423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001543423.1
            Genome Coverage       :: 77x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/22/2022 17:09:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,811
            CDSs (total)                      :: 2,743
            Genes (coding)                    :: 2,689
            CDSs (with protein)               :: 2,689
            Genes (RNA)                       :: 68
            rRNAs                             :: 2, 4, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 4, 2 (16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 54
            CDSs (without protein)            :: 54
            Pseudo Genes (ambiguous residues) :: 0 of 54
            Pseudo Genes (frameshifted)       :: 27 of 54
            Pseudo Genes (incomplete)         :: 27 of 54
            Pseudo Genes (internal stop)      :: 10 of 54
            Pseudo Genes (multiple problems)  :: 10 of 54
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..387
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMD00233528-rid16434743.denovo.333"
                     /strain="K18-6-464"
                     /db_xref="taxon:1280"
                     /geo_loc_name="Japan: Niigata"
     gene            29..>387
                     /locus_tag="O7798_002778"
     CDS             29..>387
                     /locus_tag="O7798_002778"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000733274.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine hydrolase"
                     /protein_id="HDC2864938.1"
                     /translation="MKKLILLIAIALVLSACNSTSSHTKELNNLEKKYNANIGVYALD
                     TKSGKEVKFNADKRFAYASTSKAINSAILLEQVPYNKLNKKVHINKDDIVAYSPILEK
                     YVGKDITLKELIEASMK"
BASE COUNT          157 a           39 c           60 g          131 t
ORIGIN      
        1 ttacaaatgt aatattggag ggtatatttt gaaaaagtta atacttttaa ttgcaattgc
       61 tttagtttta agtgcatgta attcaaccag ttcacatact aaagagttaa ataatttaga
      121 aaaaaaatat aatgctaata ttggtgtcta tgcattagat actaaaagtg gtaaggaagt
      181 aaaatttaat gccgataaga gatttgccta tgcttcaact tcaaaagcga taaatagtgc
      241 tattttgtta gaacaagtac cttataataa gttaaataaa aaagtacata ttaacaaaga
      301 tgatatagtt gcttattctc ctattttaga aaaatatgta ggaaaagata tcactttaaa
      361 agaacttatt gaggcttcaa tgaagta
//
LOCUS       DALPQQ010000322          386 bp    DNA     linear   BCT 22-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus strain K18-6-464
            SAMD00233528-rid16434743.denovo.334, whole genome shotgun sequence.
ACCESSION   DALPQQ010000322 DALPQQ010000000
VERSION     DALPQQ010000322.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMD00233528
            Sequence Read Archive: DRR236061
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 386)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 386)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001543423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001543423.1
            Genome Coverage       :: 77x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/22/2022 17:09:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,811
            CDSs (total)                      :: 2,743
            Genes (coding)                    :: 2,689
            CDSs (with protein)               :: 2,689
            Genes (RNA)                       :: 68
            rRNAs                             :: 2, 4, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 4, 2 (16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 54
            CDSs (without protein)            :: 54
            Pseudo Genes (ambiguous residues) :: 0 of 54
            Pseudo Genes (frameshifted)       :: 27 of 54
            Pseudo Genes (incomplete)         :: 27 of 54
            Pseudo Genes (internal stop)      :: 10 of 54
            Pseudo Genes (multiple problems)  :: 10 of 54
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..386
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMD00233528-rid16434743.denovo.334"
                     /strain="K18-6-464"
                     /db_xref="taxon:1280"
                     /geo_loc_name="Japan: Niigata"
BASE COUNT          153 a           28 c           65 g          140 t
ORIGIN      
        1 attaatagat ttgaaaagta tactttattt catgaaagtt tttggtacat ttatttgaaa
       61 atgtttttat tacaaagtta catggctaaa tgtttcttaa caaaattaat ttttcgagtg
      121 taaagaatcg tgtggtaaac ataatttata tagattataa ggaggtgaaa atggtcgagg
      181 aagttaaaac gataaaatag tttgaatgtt ttgatttcaa ttctggtagg actattgaat
      241 ttgcaatcta ataagaatgt gaggtttgat ttaatatgaa gtcatattct ttgaataaaa
      301 tattactttc tcaccattag taaaatgaag atgactatta aagtgcgaaa aacaaataaa
      361 aaagagaaaa tagaattttt aatagg
//
LOCUS       DALPQQ010000323          376 bp    DNA     linear   BCT 22-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus strain K18-6-464
            SAMD00233528-rid16434743.denovo.335, whole genome shotgun sequence.
ACCESSION   DALPQQ010000323 DALPQQ010000000
VERSION     DALPQQ010000323.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMD00233528
            Sequence Read Archive: DRR236061
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 376)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 376)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001543423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001543423.1
            Genome Coverage       :: 77x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/22/2022 17:09:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,811
            CDSs (total)                      :: 2,743
            Genes (coding)                    :: 2,689
            CDSs (with protein)               :: 2,689
            Genes (RNA)                       :: 68
            rRNAs                             :: 2, 4, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 4, 2 (16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 54
            CDSs (without protein)            :: 54
            Pseudo Genes (ambiguous residues) :: 0 of 54
            Pseudo Genes (frameshifted)       :: 27 of 54
            Pseudo Genes (incomplete)         :: 27 of 54
            Pseudo Genes (internal stop)      :: 10 of 54
            Pseudo Genes (multiple problems)  :: 10 of 54
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..376
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMD00233528-rid16434743.denovo.335"
                     /strain="K18-6-464"
                     /db_xref="taxon:1280"
                     /geo_loc_name="Japan: Niigata"
     gene            139..>376
                     /locus_tag="O7798_002779"
     CDS             139..>376
                     /locus_tag="O7798_002779"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500944.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helicase"
                     /protein_id="HDC2864939.1"
                     /translation="MRGDQRTQGEKSRKEGGKIFGSGSRAPIAISILVKDGSYNHDIY
                     YNDIGEYLTREQKLDTLMKHQSIVNLKSLNVLPDK"
BASE COUNT          150 a           39 c           74 g          113 t
ORIGIN      
        1 ttttcgatgg gcaactgata gagttggaaa aaaggtatta taggatttgt aacaaatgga
       61 tcatttattg atagtcaaag cactgatgga tttagaaaag ttttatacga tgaatttaac
      121 tatctgtaca taattaattt gagaggcgac caacgaacac agggtgaaaa atcaagaaaa
      181 gaaggtggaa aaatatttgg atcaggaagt agagcaccga tagctatatc tattttagtt
      241 aaagatggaa gttacaatca cgatatctat tataatgaca ttggtgaata tttaactaga
      301 gagcaaaaat tagatacttt aatgaaacat caatcaattg tgaatttgaa aagtttgaat
      361 gttttacccg ataaaa
//
LOCUS       DALPQQ010000324          359 bp    DNA     linear   BCT 22-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus strain K18-6-464
            SAMD00233528-rid16434743.denovo.336, whole genome shotgun sequence.
ACCESSION   DALPQQ010000324 DALPQQ010000000
VERSION     DALPQQ010000324.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMD00233528
            Sequence Read Archive: DRR236061
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 359)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 359)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001543423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001543423.1
            Genome Coverage       :: 77x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/22/2022 17:09:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,811
            CDSs (total)                      :: 2,743
            Genes (coding)                    :: 2,689
            CDSs (with protein)               :: 2,689
            Genes (RNA)                       :: 68
            rRNAs                             :: 2, 4, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 4, 2 (16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 54
            CDSs (without protein)            :: 54
            Pseudo Genes (ambiguous residues) :: 0 of 54
            Pseudo Genes (frameshifted)       :: 27 of 54
            Pseudo Genes (incomplete)         :: 27 of 54
            Pseudo Genes (internal stop)      :: 10 of 54
            Pseudo Genes (multiple problems)  :: 10 of 54
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..359
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMD00233528-rid16434743.denovo.336"
                     /strain="K18-6-464"
                     /db_xref="taxon:1280"
                     /geo_loc_name="Japan: Niigata"
     gene            120..>359
                     /gene="sarR"
                     /locus_tag="O7798_002780"
     CDS             120..>359
                     /gene="sarR"
                     /locus_tag="O7798_002780"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501027.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HTH-type transcriptional regulator SarR"
                     /protein_id="HDC2864940.1"
                     /translation="MSKINDINDLVNATFQVKKFFRDTKKKFNLNYEEIYILNHILRS
                     ESNEISSKEIAKCSEFKPYYLTKALQKLKDLKLLSK"
BASE COUNT          143 a           40 c           54 g          122 t
ORIGIN      
        1 aatttttata cttatttgtt tagaatgaac tttataacat agttggatag agtttcgatt
       61 taataaatta catgtgaacc ttgctacaac aagatgtgca tcagaggagt ggtttaataa
      121 tgagtaaaat taatgacatt aatgatttag tcaacgcaac atttcaagtt aagaagtttt
      181 tcagagatac aaaaaagaag ttcaatttga actatgaaga aatttatatt ttaaatcata
      241 ttttaagaag tgagtctaac gaaatctcat ctaaagagat tgctaagtgc tcagagttca
      301 aaccttacta tttaactaaa gctttacaaa agctaaaaga tttaaaattg ttatcaaag
//
LOCUS       DALPQQ010000325          352 bp    DNA     linear   BCT 22-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus strain K18-6-464
            SAMD00233528-rid16434743.denovo.338, whole genome shotgun sequence.
ACCESSION   DALPQQ010000325 DALPQQ010000000
VERSION     DALPQQ010000325.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMD00233528
            Sequence Read Archive: DRR236061
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 352)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 352)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001543423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001543423.1
            Genome Coverage       :: 77x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/22/2022 17:09:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,811
            CDSs (total)                      :: 2,743
            Genes (coding)                    :: 2,689
            CDSs (with protein)               :: 2,689
            Genes (RNA)                       :: 68
            rRNAs                             :: 2, 4, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 4, 2 (16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 54
            CDSs (without protein)            :: 54
            Pseudo Genes (ambiguous residues) :: 0 of 54
            Pseudo Genes (frameshifted)       :: 27 of 54
            Pseudo Genes (incomplete)         :: 27 of 54
            Pseudo Genes (internal stop)      :: 10 of 54
            Pseudo Genes (multiple problems)  :: 10 of 54
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..352
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMD00233528-rid16434743.denovo.338"
                     /strain="K18-6-464"
                     /db_xref="taxon:1280"
                     /geo_loc_name="Japan: Niigata"
     gene            6..>352
                     /locus_tag="O7798_002781"
     CDS             6..>352
                     /locus_tag="O7798_002781"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000393259.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HDC2864941.1"
                     /translation="MEEVLIDDNMVFDIDNLKGFLNDTSSFGFIAKENNKIIGFAYCY
                     TLLRPDGKTMFYLHSIGMLPNYQDKGYGSKLLSFIKEYSKEIGCSEMFLITDKGNPRA
                     CHVYEKLGGKNDY"
BASE COUNT          132 a           30 c           59 g          131 t
ORIGIN      
        1 agtttatgga agaagtttta attgatgata atatggtttt tgatattgat aatttaaaag
       61 gatttcttaa tgataccagt tcatttgggt ttatagctaa agaaaataat aaaattatag
      121 gatttgcata ttgctataca cttttaagac ctgatggaaa aacaatgttt tatttacact
      181 caataggaat gttacctaac tatcaagaca aaggttatgg ttcaaaatta ttatctttta
      241 ttaaggaata ttctaaagag attggttgtt ctgaaatgtt tttaataact gataaaggta
      301 atcctagagc ttgccatgta tatgaaaaat taggtggtaa aaatgattat aa
//
LOCUS       DALPQQ010000326          350 bp    DNA     linear   BCT 22-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus strain K18-6-464
            SAMD00233528-rid16434743.denovo.339, whole genome shotgun sequence.
ACCESSION   DALPQQ010000326 DALPQQ010000000
VERSION     DALPQQ010000326.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMD00233528
            Sequence Read Archive: DRR236061
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 350)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 350)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001543423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001543423.1
            Genome Coverage       :: 77x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/22/2022 17:09:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,811
            CDSs (total)                      :: 2,743
            Genes (coding)                    :: 2,689
            CDSs (with protein)               :: 2,689
            Genes (RNA)                       :: 68
            rRNAs                             :: 2, 4, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 4, 2 (16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 54
            CDSs (without protein)            :: 54
            Pseudo Genes (ambiguous residues) :: 0 of 54
            Pseudo Genes (frameshifted)       :: 27 of 54
            Pseudo Genes (incomplete)         :: 27 of 54
            Pseudo Genes (internal stop)      :: 10 of 54
            Pseudo Genes (multiple problems)  :: 10 of 54
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..350
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMD00233528-rid16434743.denovo.339"
                     /strain="K18-6-464"
                     /db_xref="taxon:1280"
                     /geo_loc_name="Japan: Niigata"
BASE COUNT          147 a           64 c           37 g          102 t
ORIGIN      
        1 actaagtaat gttaagtaaa cattttatac tttatcagaa caaaaaagac atgcatcaac
       61 atgtcagtga aactaatcca tattatctta acaacgaaat tgaatcgaac ctgaaaaacg
      121 tatttacaaa tcgcaactac tctatccaag gcaaaatcgc aaaatctgat ccccgaaata
      181 acatatctcg aaaaaaattc cataattcaa tcatcttcaa tatttaacaa tacattacta
      241 gttccaaata tactcataca tacatgtttc attgattgac tgcatattgt cataaataat
      301 aggggaacta atcgctaata atgttgttaa acacaataca tagtaaagtg
//
LOCUS       DALPQQ010000327          341 bp    DNA     linear   BCT 22-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus strain K18-6-464
            SAMD00233528-rid16434743.denovo.341, whole genome shotgun sequence.
ACCESSION   DALPQQ010000327 DALPQQ010000000
VERSION     DALPQQ010000327.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMD00233528
            Sequence Read Archive: DRR236061
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 341)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 341)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001543423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001543423.1
            Genome Coverage       :: 77x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/22/2022 17:09:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,811
            CDSs (total)                      :: 2,743
            Genes (coding)                    :: 2,689
            CDSs (with protein)               :: 2,689
            Genes (RNA)                       :: 68
            rRNAs                             :: 2, 4, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 4, 2 (16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 54
            CDSs (without protein)            :: 54
            Pseudo Genes (ambiguous residues) :: 0 of 54
            Pseudo Genes (frameshifted)       :: 27 of 54
            Pseudo Genes (incomplete)         :: 27 of 54
            Pseudo Genes (internal stop)      :: 10 of 54
            Pseudo Genes (multiple problems)  :: 10 of 54
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..341
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMD00233528-rid16434743.denovo.341"
                     /strain="K18-6-464"
                     /db_xref="taxon:1280"
                     /geo_loc_name="Japan: Niigata"
     gene            complement(<1..331)
                     /locus_tag="O7798_002782"
     CDS             complement(<1..331)
                     /locus_tag="O7798_002782"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001096376.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="beta-lactam sensor/signal transducer BlaR1"
                     /protein_id="HDC2864942.1"
                     /translation="MAKLLIMSIVSFCFIFLLLVFFRYILKRYFNYMLNYKVWYLTLL
                     AGLIPFIPIKFSLFKFNNLNNQEPTVESNSHNLNPNINTTKPVHEFTTDIHKFNWDSI
                     DNICTVIW"
BASE COUNT          135 a           44 c           46 g          116 t
ORIGIN      
        1 tccaaataac tgtgcagata ttatctattg aatcccaatt aaacttatgg atgtctgttg
       61 taaactcatg aacaggttta gtggtattta tgttaggatt caaattgtgt gaattacttt
      121 caactgtggg ctcttgatta ttcaaattat taaatttaaa aagagagaat ttaataggaa
      181 tgaaaggaat taatcctgca agaagagtta gataccaaac tttataattt aacatataat
      241 taaaatagcg ttttaatatg tacctaaaaa atactaacaa tagaaatata aaacaaaagc
      301 ttactatgct cattattaat aacttagcca tttcaacacc t
//
LOCUS       DALPQQ010000328          335 bp    DNA     linear   BCT 22-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus strain K18-6-464
            SAMD00233528-rid16434743.denovo.343, whole genome shotgun sequence.
ACCESSION   DALPQQ010000328 DALPQQ010000000
VERSION     DALPQQ010000328.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMD00233528
            Sequence Read Archive: DRR236061
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 335)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 335)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001543423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001543423.1
            Genome Coverage       :: 77x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/22/2022 17:09:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,811
            CDSs (total)                      :: 2,743
            Genes (coding)                    :: 2,689
            CDSs (with protein)               :: 2,689
            Genes (RNA)                       :: 68
            rRNAs                             :: 2, 4, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 4, 2 (16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 54
            CDSs (without protein)            :: 54
            Pseudo Genes (ambiguous residues) :: 0 of 54
            Pseudo Genes (frameshifted)       :: 27 of 54
            Pseudo Genes (incomplete)         :: 27 of 54
            Pseudo Genes (internal stop)      :: 10 of 54
            Pseudo Genes (multiple problems)  :: 10 of 54
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..335
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMD00233528-rid16434743.denovo.343"
                     /strain="K18-6-464"
                     /db_xref="taxon:1280"
                     /geo_loc_name="Japan: Niigata"
BASE COUNT          103 a           57 c           54 g          121 t
ORIGIN      
        1 tagctaatgt gtacttaaaa aatgaataca tgagtaaagc tcatgcataa gaaatactaa
       61 ttgctaaaga aaaagtattt ctttatcgat gtcctacccc aacttgcatt gtctgttgaa
      121 attggtgatc caatttctct atgttggggc cccgccaact tgcattgtct gttggaattg
      181 gtgatcctat ttctctctgt tgtggcccca cgagtattga aaaaacttgt tataagctta
      241 ttttcattta gtcaactact accaatatag cactagaact ggaaatgata atttaatatt
      301 gtacactttt gattgtttaa acatgtacat atttt
//
LOCUS       DALPQQ010000329          334 bp    DNA     linear   BCT 22-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus strain K18-6-464
            SAMD00233528-rid16434743.denovo.344, whole genome shotgun sequence.
ACCESSION   DALPQQ010000329 DALPQQ010000000
VERSION     DALPQQ010000329.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMD00233528
            Sequence Read Archive: DRR236061
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 334)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 334)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001543423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001543423.1
            Genome Coverage       :: 77x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/22/2022 17:09:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,811
            CDSs (total)                      :: 2,743
            Genes (coding)                    :: 2,689
            CDSs (with protein)               :: 2,689
            Genes (RNA)                       :: 68
            rRNAs                             :: 2, 4, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 4, 2 (16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 54
            CDSs (without protein)            :: 54
            Pseudo Genes (ambiguous residues) :: 0 of 54
            Pseudo Genes (frameshifted)       :: 27 of 54
            Pseudo Genes (incomplete)         :: 27 of 54
            Pseudo Genes (internal stop)      :: 10 of 54
            Pseudo Genes (multiple problems)  :: 10 of 54
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..334
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMD00233528-rid16434743.denovo.344"
                     /strain="K18-6-464"
                     /db_xref="taxon:1280"
                     /geo_loc_name="Japan: Niigata"
BASE COUNT          124 a           39 c           37 g          134 t
ORIGIN      
        1 ttttttaata atttacacca aattaatagc aaaaattatg ttattcgtgc taatatttca
       61 tagttggtta ttcaattaat taaaaataag tcaaaatgca caacttttta taattcattg
      121 agtcgagttt gaaaaataaa agtgctttaa tgcatgatca attatcgtac tttctattat
      181 ttgttacccg ttatcaatcg gaataacgta tagacacttt aacgtgctat agattggttt
      241 taatcactaa attaatgtgt ttttcttatc attaaaactg cactgagaat tactaaatta
      301 aaaaaattat aaaaattttt catttttagt gata
//
LOCUS       DALPQQ010000330          314 bp    DNA     linear   BCT 22-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus strain K18-6-464
            SAMD00233528-rid16434743.denovo.346, whole genome shotgun sequence.
ACCESSION   DALPQQ010000330 DALPQQ010000000
VERSION     DALPQQ010000330.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMD00233528
            Sequence Read Archive: DRR236061
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 314)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 314)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001543423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001543423.1
            Genome Coverage       :: 77x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/22/2022 17:09:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,811
            CDSs (total)                      :: 2,743
            Genes (coding)                    :: 2,689
            CDSs (with protein)               :: 2,689
            Genes (RNA)                       :: 68
            rRNAs                             :: 2, 4, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 4, 2 (16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 54
            CDSs (without protein)            :: 54
            Pseudo Genes (ambiguous residues) :: 0 of 54
            Pseudo Genes (frameshifted)       :: 27 of 54
            Pseudo Genes (incomplete)         :: 27 of 54
            Pseudo Genes (internal stop)      :: 10 of 54
            Pseudo Genes (multiple problems)  :: 10 of 54
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..314
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMD00233528-rid16434743.denovo.346"
                     /strain="K18-6-464"
                     /db_xref="taxon:1280"
                     /geo_loc_name="Japan: Niigata"
     gene            <1..>314
                     /locus_tag="O7798_002783"
     CDS             <1..>314
                     /locus_tag="O7798_002783"
                     /inference="COORDINATES: protein
                     motif:HMM:NF013622.1,HMM:NF019192.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GA module-containing protein"
                     /protein_id="HDC2864943.1"
                     /translation="DDKQHAVTDLNQLNGLNNPQRQALESQINNAATRGEVAQKLAEA
                     KALDQAMQALRNSIQDQQQTESGSKFINEDKPQKDAYQAAVQNAKDLINQTGNPTLDK
                     SQV"
BASE COUNT          135 a           62 c           53 g           64 t
ORIGIN      
        1 gacgataaac aacatgcggt tactgattta aatcaattaa atggtttgaa taatccgcaa
       61 cgtcaagcac ttgaaagcca aataaacaac gcagcaactc gtggcgaagt agcacaaaaa
      121 ttagctgaag caaaagcgct tgatcaagca atgcaagcat tacgtaatag tattcaagat
      181 caacaacaaa cagaatctgg tagcaagttt atcaatgaag ataaaccgca aaaagatgct
      241 taccaagcag cagttcaaaa tgcaaaagat ttaattaacc aaacaggtaa tccaacactc
      301 gacaaatcac aagt
//
LOCUS       DALPQQ010000331          309 bp    DNA     linear   BCT 22-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus strain K18-6-464
            SAMD00233528-rid16434743.denovo.347, whole genome shotgun sequence.
ACCESSION   DALPQQ010000331 DALPQQ010000000
VERSION     DALPQQ010000331.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMD00233528
            Sequence Read Archive: DRR236061
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 309)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 309)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001543423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001543423.1
            Genome Coverage       :: 77x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/22/2022 17:09:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,811
            CDSs (total)                      :: 2,743
            Genes (coding)                    :: 2,689
            CDSs (with protein)               :: 2,689
            Genes (RNA)                       :: 68
            rRNAs                             :: 2, 4, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 4, 2 (16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 54
            CDSs (without protein)            :: 54
            Pseudo Genes (ambiguous residues) :: 0 of 54
            Pseudo Genes (frameshifted)       :: 27 of 54
            Pseudo Genes (incomplete)         :: 27 of 54
            Pseudo Genes (internal stop)      :: 10 of 54
            Pseudo Genes (multiple problems)  :: 10 of 54
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..309
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMD00233528-rid16434743.denovo.347"
                     /strain="K18-6-464"
                     /db_xref="taxon:1280"
                     /geo_loc_name="Japan: Niigata"
BASE COUNT           98 a           68 c           27 g          116 t
ORIGIN      
        1 acttctctct tcatatccac tattattcct cctcttcatt agttaaccgg ttaactatat
       61 tattgttgtc actcccattt ttgtcaaata ttgttgtaat taacatatat ttacttagtt
      121 atgcaccatt tattccgcat ttcacaaatc cacctataat acaaactatc attttaaata
      181 agcagaattt accctgtctt ccacacaaat tgttttcgac actttaatgt gcctactatc
      241 caaaaaagtt actcataaca aattgcgcat tttaataaat gtagcaatgc catttgcatg
      301 ctgcaaaaa
//
LOCUS       DALPQQ010000332          309 bp    DNA     linear   BCT 22-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus strain K18-6-464
            SAMD00233528-rid16434743.denovo.348, whole genome shotgun sequence.
ACCESSION   DALPQQ010000332 DALPQQ010000000
VERSION     DALPQQ010000332.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMD00233528
            Sequence Read Archive: DRR236061
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 309)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 309)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001543423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001543423.1
            Genome Coverage       :: 77x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/22/2022 17:09:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,811
            CDSs (total)                      :: 2,743
            Genes (coding)                    :: 2,689
            CDSs (with protein)               :: 2,689
            Genes (RNA)                       :: 68
            rRNAs                             :: 2, 4, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 4, 2 (16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 54
            CDSs (without protein)            :: 54
            Pseudo Genes (ambiguous residues) :: 0 of 54
            Pseudo Genes (frameshifted)       :: 27 of 54
            Pseudo Genes (incomplete)         :: 27 of 54
            Pseudo Genes (internal stop)      :: 10 of 54
            Pseudo Genes (multiple problems)  :: 10 of 54
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..309
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMD00233528-rid16434743.denovo.348"
                     /strain="K18-6-464"
                     /db_xref="taxon:1280"
                     /geo_loc_name="Japan: Niigata"
     gene            complement(55..>309)
                     /locus_tag="O7798_002784"
     rRNA            complement(55..>309)
                     /locus_tag="O7798_002784"
                     /product="16S ribosomal RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00177"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00177"
BASE COUNT           77 a           83 c           68 g           81 t
ORIGIN      
        1 atatgtcacg ttattccgca tcttctgaag aagatgttcc gaatatatcc ttagaaagga
       61 ggtgatccag ccgcaccttc cgatacggct accttgttac gacttcaccc caatcatttg
      121 tcccaccttc gacggctagc tcctaaaagg ttactccacc ggcttcgggt gttacaaact
      181 ctcgtggtgt gacgggcggt gtgtacaaga cccgggaacg tattcaccgt agcatgctga
      241 tctacgatta ctagcgattc cagcttcatg tagtcgagtt gcagactaca atccgaactg
      301 agaacaact
//
LOCUS       DALPQQ010000333          307 bp    DNA     linear   BCT 22-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus strain K18-6-464
            SAMD00233528-rid16434743.denovo.349, whole genome shotgun sequence.
ACCESSION   DALPQQ010000333 DALPQQ010000000
VERSION     DALPQQ010000333.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMD00233528
            Sequence Read Archive: DRR236061
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 307)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 307)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001543423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001543423.1
            Genome Coverage       :: 77x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/22/2022 17:09:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,811
            CDSs (total)                      :: 2,743
            Genes (coding)                    :: 2,689
            CDSs (with protein)               :: 2,689
            Genes (RNA)                       :: 68
            rRNAs                             :: 2, 4, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 4, 2 (16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 54
            CDSs (without protein)            :: 54
            Pseudo Genes (ambiguous residues) :: 0 of 54
            Pseudo Genes (frameshifted)       :: 27 of 54
            Pseudo Genes (incomplete)         :: 27 of 54
            Pseudo Genes (internal stop)      :: 10 of 54
            Pseudo Genes (multiple problems)  :: 10 of 54
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..307
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMD00233528-rid16434743.denovo.349"
                     /strain="K18-6-464"
                     /db_xref="taxon:1280"
                     /geo_loc_name="Japan: Niigata"
     gene            <1..>307
                     /locus_tag="O7798_002785"
     CDS             <1..>307
                     /locus_tag="O7798_002785"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000776424.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II secretion system F family protein"
                     /protein_id="HDC2864944.1"
                     /translation="LQSIVDVYINHSSDPFRQFLGKYLLTYSEMGYGLPQILEKLKCF
                     KPQLIKFVLQGEKRGKLEVELKLYSQILVKQIEDKAIKQTQFLQPILFLILGLFIVAI
                     "
BASE COUNT          114 a           37 c           50 g          106 t
ORIGIN      
        1 cttcaatcaa tagtagacgt ttatattaac catagtagtg atccatttag acagtttcta
       61 ggtaaatact tattaactta ttcagaaatg ggatatggtt tgcctcaaat tttagaaaaa
      121 ctaaaatgct ttaagcctca attaattaag tttgtgctac aaggtgaaaa gagagggaag
      181 ctagaagtag aactaaagtt atattcgcaa atattagtaa aacaaataga agataaagcg
      241 ataaaacaga ctcagttttt acagcctatt ttatttttga ttttaggttt atttattgtc
      301 gcaattt
//
LOCUS       DALPQQ010000334          302 bp    DNA     linear   BCT 22-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus strain K18-6-464
            SAMD00233528-rid16434743.denovo.350, whole genome shotgun sequence.
ACCESSION   DALPQQ010000334 DALPQQ010000000
VERSION     DALPQQ010000334.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMD00233528
            Sequence Read Archive: DRR236061
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 302)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 302)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001543423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001543423.1
            Genome Coverage       :: 77x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/22/2022 17:09:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,811
            CDSs (total)                      :: 2,743
            Genes (coding)                    :: 2,689
            CDSs (with protein)               :: 2,689
            Genes (RNA)                       :: 68
            rRNAs                             :: 2, 4, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 4, 2 (16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 54
            CDSs (without protein)            :: 54
            Pseudo Genes (ambiguous residues) :: 0 of 54
            Pseudo Genes (frameshifted)       :: 27 of 54
            Pseudo Genes (incomplete)         :: 27 of 54
            Pseudo Genes (internal stop)      :: 10 of 54
            Pseudo Genes (multiple problems)  :: 10 of 54
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..302
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMD00233528-rid16434743.denovo.350"
                     /strain="K18-6-464"
                     /db_xref="taxon:1280"
                     /geo_loc_name="Japan: Niigata"
     gene            <1..>302
                     /locus_tag="O7798_002786"
     CDS             <1..>302
                     /locus_tag="O7798_002786"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500098.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDC2864945.1"
                     /translation="IFKNIDHDFRDGVSEEMMKHLKVVKQNIDQIKNQNDIYGRQIAD
                     IRSIMKQQDATILDGNFQINCSGENMVQGLVIPSNYLGRKMKILKDHIDDGIKKIA"
BASE COUNT          137 a           29 c           53 g           83 t
ORIGIN      
        1 aaattttcaa aaatatagat cacgacttca gagatggagt atctgaagaa atgatgaaac
       61 atttgaaagt agtgaaacag aatatagacc aaataaaaaa tcaaaatgat atttatggta
      121 ggcaaattgc agatattaga agtattatga aacaacaaga tgcaacaatt ttagatggaa
      181 attttcaaat taattgtagc ggcgaaaata tggtacaggg tctagttata ccttctaatt
      241 atttaggaag aaaaatgaaa atattaaaag accatatcga tgatggtatt aaaaaaatag
      301 ca
//
LOCUS       DALPQQ010000335          281 bp    DNA     linear   BCT 22-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus strain K18-6-464
            SAMD00233528-rid16434743.denovo.354, whole genome shotgun sequence.
ACCESSION   DALPQQ010000335 DALPQQ010000000
VERSION     DALPQQ010000335.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMD00233528
            Sequence Read Archive: DRR236061
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 281)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 281)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001543423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001543423.1
            Genome Coverage       :: 77x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/22/2022 17:09:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,811
            CDSs (total)                      :: 2,743
            Genes (coding)                    :: 2,689
            CDSs (with protein)               :: 2,689
            Genes (RNA)                       :: 68
            rRNAs                             :: 2, 4, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 4, 2 (16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 54
            CDSs (without protein)            :: 54
            Pseudo Genes (ambiguous residues) :: 0 of 54
            Pseudo Genes (frameshifted)       :: 27 of 54
            Pseudo Genes (incomplete)         :: 27 of 54
            Pseudo Genes (internal stop)      :: 10 of 54
            Pseudo Genes (multiple problems)  :: 10 of 54
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..281
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMD00233528-rid16434743.denovo.354"
                     /strain="K18-6-464"
                     /db_xref="taxon:1280"
                     /geo_loc_name="Japan: Niigata"
     gene            10..195
                     /locus_tag="O7798_002787"
     CDS             10..195
                     /locus_tag="O7798_002787"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499662.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDC2864946.1"
                     /translation="MNKHINKKAAKLLEDYKKVQQRKSKETDRGCLKSVIMLIVLFFL
                     IIFGIVACSTNVNFFFQ"
BASE COUNT          106 a           35 c           46 g           94 t
ORIGIN      
        1 gtcaacatca tgaataaaca tataaataaa aaagccgcaa aactacttga agattataaa
       61 aaggttcaac aaagaaaatc gaaagaaact gatagaggtt gtttgaaaag tgtcatcatg
      121 cttatcgtct tatttttctt aattattttt ggtattgtgg catgttctac aaacgtaaac
      181 tttttcttcc agtaaaagag tgagatagaa atgataaaga accactaatg atttattatg
      241 tagtggttct ttatcattag ctgtagctaa tgtgtactta a
//
LOCUS       DALPQQ010000336          277 bp    DNA     linear   BCT 22-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus strain K18-6-464
            SAMD00233528-rid16434743.denovo.356, whole genome shotgun sequence.
ACCESSION   DALPQQ010000336 DALPQQ010000000
VERSION     DALPQQ010000336.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMD00233528
            Sequence Read Archive: DRR236061
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 277)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 277)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001543423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001543423.1
            Genome Coverage       :: 77x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/22/2022 17:09:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,811
            CDSs (total)                      :: 2,743
            Genes (coding)                    :: 2,689
            CDSs (with protein)               :: 2,689
            Genes (RNA)                       :: 68
            rRNAs                             :: 2, 4, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 4, 2 (16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 54
            CDSs (without protein)            :: 54
            Pseudo Genes (ambiguous residues) :: 0 of 54
            Pseudo Genes (frameshifted)       :: 27 of 54
            Pseudo Genes (incomplete)         :: 27 of 54
            Pseudo Genes (internal stop)      :: 10 of 54
            Pseudo Genes (multiple problems)  :: 10 of 54
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..277
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMD00233528-rid16434743.denovo.356"
                     /strain="K18-6-464"
                     /db_xref="taxon:1280"
                     /geo_loc_name="Japan: Niigata"
     gene            69..>277
                     /locus_tag="O7798_002788"
     CDS             69..>277
                     /locus_tag="O7798_002788"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501314.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDC2864947.1"
                     /translation="MEIIIEIYMYLRDGIKEHFILKKVRKKFKKLNEINSDIQNMYAE
                     NQGLLETDKTIIDKVLSTDVTNSHD"
BASE COUNT          118 a           23 c           48 g           88 t
ORIGIN      
        1 ctgaaaaaac ctttcttatt tttaatatat tgagtataat gttttttgag agaggagata
       61 tgacatttat ggagattata atagagattt atatgtattt aagagatgga attaaagagc
      121 attttatttt gaaaaaggtt agaaaaaaat ttaaaaaatt aaatgagatt aacagcgata
      181 tacaaaatat gtatgcagaa aatcaggggc tcttagaaac agataaaaca ataattgaca
      241 aggtcttaag cactgacgtt acaaatagcc atgatat
//
LOCUS       DALPQQ010000337         7568 bp    DNA     linear   BCT 22-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus strain K18-6-464
            SAMD00233528-rid16434743.guided.113, whole genome shotgun sequence.
ACCESSION   DALPQQ010000337 DALPQQ010000000
VERSION     DALPQQ010000337.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMD00233528
            Sequence Read Archive: DRR236061
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 7568)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7568)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001543423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001543423.1
            Genome Coverage       :: 77x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/22/2022 17:09:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,811
            CDSs (total)                      :: 2,743
            Genes (coding)                    :: 2,689
            CDSs (with protein)               :: 2,689
            Genes (RNA)                       :: 68
            rRNAs                             :: 2, 4, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 4, 2 (16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 54
            CDSs (without protein)            :: 54
            Pseudo Genes (ambiguous residues) :: 0 of 54
            Pseudo Genes (frameshifted)       :: 27 of 54
            Pseudo Genes (incomplete)         :: 27 of 54
            Pseudo Genes (internal stop)      :: 10 of 54
            Pseudo Genes (multiple problems)  :: 10 of 54
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7568
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMD00233528-rid16434743.guided.113"
                     /strain="K18-6-464"
                     /db_xref="taxon:1280"
                     /geo_loc_name="Japan: Niigata"
     gene            complement(32..1153)
                     /locus_tag="O7798_002789"
     CDS             complement(32..1153)
                     /locus_tag="O7798_002789"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501066.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M20 peptidase aminoacylase family protein"
                     /protein_id="HDC2864948.1"
                     /translation="MGLKDQAVTWRRYFHQFPELSDKEFKTTQKIKDILTEHHIRILD
                     LPLATGLVAEVGQGLSCIAVRADIDALPIQELVEQDFKSENEGVMHACGHDIHMASIL
                     ATAVKLKEIEGTLTGRVKFIFQSAEELGHGAFKIIETHALKDVQAVLGFHNDPSRSVG
                     TFAIKTGAITSAVDRFEFHIKGVGGHAAKPEQCNDPVIVLAQLINSIQSIVSRNLSAF
                     DEAVVTIGQISCGNTWNVIADHAYVQGTVRSFDPVVRKLVETRLQDIADGLAQAYNMK
                     INLNYTHLPGAVMNDEALTHKAIAVAQHVGYKVEMMEQPLTIGEDFSGYSQHFPSVFA
                     LIGSHSEYDLHHPQYKPDERILEKVPEYFVEFVKRLLHE"
     gene            complement(1430..2668)
                     /locus_tag="O7798_002790"
     CDS             complement(1430..2668)
                     /locus_tag="O7798_002790"
                     /EC_number="3.5.2.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501067.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="imidazolonepropionase"
                     /protein_id="HDC2864949.1"
                     /translation="MNDLIINHIAELILPRSTDKPLKGKELDELNVVKNGTVVIKDGK
                     IVYAGTHTDDYDATETIDASGKVVSPALVDAHTHLTFGGSREHEMSLKRQGKSYLEIL
                     EMGGGILSTVNATRETSEDDLFKKAEHDLLTMIKHGVLAVESKSGYGLDRENELKQLK
                     VSNRLAEKYDLDMKHTFLGPHAVPKEASSNEAFLEEMIALLPEVKQYADFADIFCETG
                     VFTIEQSQHYMQKAKEAGFKVKIHADEIDPLGGLELAIDEQAISADHLVASSDKGKEK
                     LRNSDTVAVLLPATTFYLGKEDYADARGMLDNNGAIALATDYNPGSSVTNNLQLVMAI
                     AALKLKLSPNEVWNAVTVNAAKAIDINAGTINTGDKANLVIWDAPNHEYIPYHFGINH
                     AEKVIKDGKVIVDNTVSFKA"
     gene            complement(2668..4329)
                     /gene="hutU"
                     /locus_tag="O7798_002791"
     CDS             complement(2668..4329)
                     /gene="hutU"
                     /locus_tag="O7798_002791"
                     /EC_number="4.2.1.49"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501068.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="urocanate hydratase"
                     /protein_id="HDC2864950.1"
                     /translation="MRKIQAKKGLSIECKGWEQEAVLRMLYNNLDPEVAERPEDLVVY
                     GGIGKAARNWEAFEAIEKTLRELESDETMLVQSGKPVAVFKTHEEAPRVLISNSVLVP
                     EWANWDHFNELDKKGLIMYGQMTAGSWIYIGSQGIVQGTYETFAELGNQHFNGDLAGT
                     VTLTAGLGGMGGAQPLAITMNHGVAICVDVDETRVDKRIDTKYCDVKTADLDEALKLA
                     EEAKERGEGLSIGLVGNAVDIHQAILEKGFKIDIITDQTSAHDPLNGYVPQGYSVEEA
                     KVLREKDPKKYVELSQASMAKHVELMLEFQKRGAVAFDYGNNIRQVAFNNGVKNAFDF
                     PGFVPAYIRPLFCEGKGPFRFAALSGDPKDIERADEEMRKLFPENEKLLRWLDLAEEK
                     ISYQGLPSRIAWLGYGERAKMGLALNRLVRDGEISAPIVIGRDHLDAGSVASPNRETE
                     SMKDGSDAVGDWAVLNALINTAAGGSWISFHHGGGVGMGYSLHAGMVVVADGSERAER
                     RLERVLTTDPGMGVARHVDAGYDIAIQTAKEKGIHIPMIDKAGDK"
     gene            4489..5373
                     /locus_tag="O7798_002792"
     CDS             4489..5373
                     /locus_tag="O7798_002792"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501069.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HDC2864951.1"
                     /translation="MKIIQLEYFLAIVKYNSFTKAAQFLHISQPSLTATIKKMEADLG
                     YDLFTRSTKDIKITEKGIQFYRYASELVQQYRSTMEKMYDLSVTSEPRIKIGTLESTN
                     QWIANLIRKHHSDYPEQQYRLYEIHDKHQSIEQLLNFNIHLAITNEKITHEDIRSIPL
                     YEESYILLAPKETFKNQNWVDVENLPLILPNKNSQVRKHLDDYFNRRNIRPNVVVETD
                     RFESAVGFVHLGLGYAIIPRFYYQSFHTSNLEYKKIRPNLGRKIYINYHKKRKHSEQV
                     HTFVQQCQDYLYGLLEAL"
     gene            5615..6034
                     /locus_tag="O7798_002793"
     CDS             5615..6034
                     /locus_tag="O7798_002793"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501070.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FosB1/FosB3 family fosfomycin resistance
                     bacillithiol transferase"
                     /protein_id="HDC2864952.1"
                     /translation="MLKSINHICFSVRNLNDSIHFYRDILLGKLLLTGKKTAYFELAG
                     LWIALNEEKDIPRNEIHFSYTHIAFTIDDSEFKYWHQRLKDNNVNILEGRVRDIRDRQ
                     SIYFTDPDGHKLELHTGTLENRLNYYKEAKPHMTFYK"
     gene            complement(6290..7225)
                     /locus_tag="O7798_002794"
     CDS             complement(6290..7225)
                     /locus_tag="O7798_002794"
                     /EC_number="3.5.3.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501071.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="formimidoylglutamase"
                     /protein_id="HDC2864953.1"
                     /translation="MYKQGEPNLWTGRLDSETDPKKFRHFQTVTFEDLSKLEKSSMPS
                     GVGILGYAVDKGVALNKGRIGAKEGPDAIKQAFAGLPDLNQCETLVDYGNVYHDHEEL
                     IDTQKEFAMLAAKSIANHRQTFLLGGGHDIAYAQYLATRKVYPTQSIGVINIDAHFDT
                     RAEQQSTSGTSFRQILEEDENTDYLVLGIAQGGNTQSLFDYAKEKKIDYVFADELLSH
                     VSPTIKDMIERFVHEHDVIMFTICMDVIDSAFAPGVSAPAVLGLYPHTVLELAKRIIP
                     SDKVSSVSIAEMNPTYDADNRTAKLVANLVHHFLK"
BASE COUNT         2396 a         1555 c         1071 g         2546 t
ORIGIN      
        1 ttactttctt ctttataaaa acaagctcga attattcatg caatagtctc tttacaaatt
       61 caacaaaata ctcaggtact ttttccagaa tcctttcatc cggtttatat tgaggatgat
      121 gtaaatcata ttcactatga gaaccaatta acgcaaatac acttggaaaa tgttgactat
      181 aacctgaaaa atcttctcca atcgtaagcg gctgttccat catttccacc ttatatccaa
      241 catgttgggc tactgcaatt gctttatgcg tcaatgcctc atcattcatc acagcgccag
      301 gtaaatgcgt ataatttaaa ttaattttca tattatatgc ttgagccaat ccgtccgcaa
      361 tatcttgtaa tcgtgtttct acaagctttc gtaccacagg atcaaaacta cgcactgtgc
      421 cttgtacata cgcatgatca gcaatgacat tccaagtatt accacatgat atttgtccaa
      481 ttgttactac cgcttcatca aacgcagata gatttctact aactatggat tgaatactat
      541 taatcaattg cgccaacaca ataactggat cgttgcattg ttctggcttt gcagcatgac
      601 cacccacgcc tttaatatga aactcaaaac gatctactgc tgatgtaatt gcccctgttt
      661 tgattgcaaa tgtacctacc gaacgcgatg ggtcattatg aaaacccaat actgcttgta
      721 catcttttaa tgcatgtgtt tcaataattt taaaagcgcc atgtcctagt tcttctgctg
      781 attgaaaaat gaatttaaca cgcccagtaa gagtgccctc aatttctttt aattttacag
      841 ctgtagccaa aatactagcc atgtgaatat catgaccaca cgcatgcata acaccttcat
      901 tttcagattt aaaatcctgt tcaacaagct cttgaatcgg taaagcatca atgtcagccc
      961 gaacagctat acaactcaga ccttgtccca cttcagcaac aagcccagtc gcaagtggta
     1021 agtctaatat tctaatatga tgttctgtta aaatatcttt aattttttgt gtagtcttaa
     1081 attctttatc ggatagttct ggaaattgat gaaaatacct tctccaggta acagcttgat
     1141 cttttaatcc catcggtcat tccccttcct taagtcaatg atatgttgtc taccctacga
     1201 tgatcatctt tgactattaa acgatgattt cacaacaatg tactcttgtt aattgctttc
     1261 gttaatgata gacagttgtt taataatatc gtaacactgt tgtcaaacta ttctaacttt
     1321 tataattgag actctataca aaaacgtgtt ctcgaatata cttgttttta caaaccacaa
     1381 aaagctctaa acattagttt aaaccaatgc ttagagcttt ctaattattt tatgctttaa
     1441 aagatactgt gttatctacg atgaccttac cgtctttaat aactttttct gcgtgattga
     1501 taccaaaatg atatggaata tattcatgat ttggtgcatc ccaaattact aaattagcct
     1561 tatcacctgt gttaattgta cccgcgttaa tgtctattgc tttagcagca ttgaccgtaa
     1621 cagcattcca aacttcatta ggtgatagct ttaatttcaa ggctgcaatc gccataacaa
     1681 gttgtaagtt gtttgtgaca ctactaccag ggttataatc agttgctaat gcaatcgcac
     1741 cgttattgtc aagcatgcct cttgcatctg cataatcttc tttacctaaa tagaacgtcg
     1801 ttgcaggtaa gaggacagct acagtatcac tatttcgcaa cttttctttt cctttatcac
     1861 tagaagctac taagtggtct gctgatattg cttgttcatc aattgctaat tccagtccgc
     1921 ctaacggatc aatttcatcc gcatgtattt tcactttaaa acctgcttct ttggcttttt
     1981 gcatataatg ttgcgattgt tctattgtaa atacacctgt ttcacagaaa atatccgcaa
     2041 agtctgcata ttgttttact tccggaagta acgcaatcat ttcttctaaa aatgcctcat
     2101 ttgaacttgc ctctttaggt acagcatgag gccctaggaa agtatgtttc atgtctaaat
     2161 catatttctc agctaaacga ttagacactt tcaattgctt cagttcattt tctctatcta
     2221 atccataacc actcttactt tcaactgcaa gcacgccgtg tttaatcata gtaagcaaat
     2281 catgctctgc ttttttaaac aagtcatctt cggatgtttc tctagtagca ttaacggtag
     2341 ataatatgcc accacccatt tctaatattt caaggtaaga cttaccttga cgttttaatg
     2401 acatctcatg ttctcgagat ccaccaaatg ttaaatgggt atgtgcatct actaatgctg
     2461 gggacactac cttcccacta gcatcaatcg tctcagtcgc atcgtagtca tctgtatgtg
     2521 ttccagcata tacaattttg ccatctttaa tgacaactgt accatttttc acaacattta
     2581 attcatctaa ttccttaccc ttcaaaggtt tatctgttga tctcggtaaa attaattctg
     2641 ctatatgatt aattattaaa tcattcatta cttatcacct gctttatcaa tcattggaat
     2701 atgaatacct ttttctttag ctgtttgaat agcgatgtca tagccagcat caacatgtcg
     2761 ggcaacaccc atacctgggt cagtcgtcaa tacacgttcc aatcttcttt cagcacgctc
     2821 tgatccatct gctacaacaa ccatacccgc atgaagtgaa tatcccatgc caacaccgcc
     2881 accgtgatgg aatgaaatcc atgaaccacc tgcagctgtg ttaatgagtg cattcaatac
     2941 agcccaatca ccaaccgcgt cactaccatc tttcatactt tctgtttcac ggttaggact
     3001 agcaactgaa ccagcatcta aatggtctcg tccaataaca attggtgctg aaatttcacc
     3061 gtcacgtaca agacgattta aagctaagcc cattttcgct ctttctccat agcctaacca
     3121 agcaatacgt gatggtagtc cttgatatga aattttttct tcagctaaat caagccatct
     3181 taataacttt tcattttctg ggaaaagttt gcgcatttct tcatccgcac gctcgatatc
     3241 ttttggatca ccactcaacg cagcaaagcg gaatggccct ttaccttcac agaataatgg
     3301 tctaatgtaa gctggtacaa agcctgggaa gtcaaaagca tttttcactc cgttattgaa
     3361 ggctacttga cgaatattgt taccataatc aaatgctaca gcgccacgtt tttggaattc
     3421 aagcattaat tcaacatgct ttgccattga agcttgtgac agttcaacat attttttcgg
     3481 atctttttca cgcaatactt tcgcttcttc tacagagtat ccttgtggca catatccatt
     3541 tagcggatca tgtgcacttg tttggtcagt aataatgtca attttaaatc ctttttctag
     3601 aatcgcttga tggatgtcta cagcatttcc aactaacccg attgataatc cttctccacg
     3661 ttctttcgcc tcttctgcta attttaatgc ttcatctaaa tcagctgttt taacatcaca
     3721 gtatttcgta tcaattcgct tatcaacacg tgtttcatca acatccacgc aaattgctac
     3781 cccatgattc atagtaattg ctaacggttg cgcaccaccc ataccaccta aacctgctgt
     3841 cagtgtaaca gtgcctgcta aatctccatt aaagtgttga ttacctagct cggcaaatgt
     3901 ctcataagta ccttgcacaa taccttgaga accaatatat atccaactac cggctgtcat
     3961 ctgtccatac atgattaaac cttttttatc taattcatta aaatgatccc agtttgccca
     4021 ttcaggcact aatactgaat ttgaaattaa tacacgtggc gcttcttcat gtgttttaaa
     4081 tacagcaact ggctttcctg attgtactaa cattgtctca tctgattcta attctcgtaa
     4141 cgttttctct attgcttcaa aagcttccca attacgtgct gcttttccaa taccaccata
     4201 aacaactaaa tcttctggtc tttcagcaac ttctgggtct aaattgttgt ataacattct
     4261 aagtactgct tcttgttccc aacctttaca ctcaatactc aaaccttttt ttgcttgaat
     4321 ttttctcata aaattcgctc ctgttctttt aagaagttaa ttccactaaa tttaaaacgc
     4381 ttacattatt atcttcaata ttcattatag tatgttaaaa tatagccaac aaatataaat
     4441 aaactaatta tccatagctt gaatctataa ataaaaggag caaaacacat gaaaattatt
     4501 cagttagaat acttcttggc tatcgtgaaa tataatagtt ttactaaagc tgcacaattt
     4561 ttacatatta gccagccatc tttaactgct acgattaaaa aaatggaagc agatttaggt
     4621 tatgacttat ttacacgttc aacaaaagac atcaagatta ccgaaaaagg aatacagttt
     4681 tatcgttatg cgagcgaatt agttcaacaa tatcgatcca cgatggaaaa aatgtatgat
     4741 ttaagcgtta catcagaacc aaggataaaa attgggactc ttgaatctac gaatcaatgg
     4801 attgcgaatt taattcgaaa gcaccattcc gactaccctg aacagcaata tcgtttatat
     4861 gaaatacatg ataaacatca atctatagag caattactga attttaatat tcatttagct
     4921 ataacaaatg aaaaaataac ccacgaagat ataagatcca ttcctttata tgaggaatct
     4981 tacattttat tagcacccaa ggaaacattt aaaaatcaaa attgggtaga tgttgaaaat
     5041 ttgccactca tattaccaaa caaaaattct caagtgcgca aacacttaga tgactatttt
     5101 aatagaagaa atattcgtcc aaatgtcgtt gtagaaacag atcgattcga atcagcagtt
     5161 ggatttgttc atctcggctt aggttacgct atcattccga gattttatta ccaatcattt
     5221 cacacgtcta atttagaata taaaaaaatt cgtccaaact taggccgaaa aatttatatc
     5281 aattaccata aaaaacgcaa acactccgaa caagtacata cattcgtaca acaatgccaa
     5341 gattatttat atggactttt agaggctctt taacttaagt tattagagcc tcttatgcag
     5401 ttgctcagtc aactgtatac ctttttcctt taacttaagt tattagtgcc tcttatgtag
     5461 ttgcgtagtc aactgtatac cttttgcctt taacttaagt tattagagcc tcttatgcag
     5521 ttgcgcagat catcgtataa aaattaatga cgtcatttca aaaatcgata caaaaataat
     5581 ttattataaa aattctaaga aagaagtgaa gcagatgtta aaatctatta atcatatatg
     5641 cttttcagtc agaaatttaa acgattcaat acatttttat agagatattt tacttgggaa
     5701 attgctattg actggtaaaa aaactgctta ttttgagctt gcaggcctat ggattgcttt
     5761 aaatgaagaa aaagatatac cacgtaatga aattcacttt tcatatacac atatagcttt
     5821 cactatagat gacagcgaat ttaaatattg gcatcagagg ttaaaagata ataacgtgaa
     5881 tattttagaa ggaagagtta gagatattag agatagacaa tcaatttact ttaccgaccc
     5941 tgatggtcat aagctagaat tacatactgg cacacttgag aacagattaa attattataa
     6001 agaggctaaa ccacatatga cattttacaa ataaggtgtc attataaaaa ggcctcttga
     6061 actccgttaa aattttaatt aattattata taataagaga acttttcaaa caatacagtt
     6121 gttatttttg ctatttcaac aaacataaat aagcagtaag atgactacaa cttaagagtc
     6181 ttcttactgc aattattttt caaatatatc aacgttaata taacttctat taagaaatac
     6241 tcacattctg ccctgcaatg caaatctcgt cacatataaa tatttttaat tattttaaaa
     6301 aatgatgcac taaattagca acgagcttag cagttctatt gtcagcgtca tatgttggat
     6361 tcatctcagc aatactaact gaagacacct tatcacttgg aataatacgt tttgctaatt
     6421 caagaacagt atgtggatac aaacctaaca ctgccggcgc acttacccca ggcgcaaacg
     6481 cactatcaat gacatccata caaatcgtaa acataatgac atcatgttca tgtacaaaac
     6541 gttcaatcat atctttaatt gttggtgata cgtgactcaa taattcatct gcaaagacat
     6601 aatcaatctt tttctcttta gcataatcaa ataaactttg cgtattacca ccttgagcaa
     6661 taccaagcac taaataatct gtgttttcat cttcttctaa aatttgtcta aagctcgttc
     6721 cagatgtaga ttgttgttca gcacgtgtat caaaatgcgc atcaatattt atcacaccaa
     6781 tagattgtgt tggatagact ttacgtgttg ctaaatattg agcatacgca atatcatgtc
     6841 caccacctaa taaaaatgtt tgtctatgat tagcaattga cttcgctgca agcatagcaa
     6901 attctttttg agtatcaatt aattcctcat gatcatgata aacatttccg taatcgacta
     6961 aagtttcaca ttgattcaaa tccggcaaac ctgcaaatgc ttgtttaatc gcatctggtc
     7021 cttcttttgc accaatgcgc cccttgttta aagcaacacc tttgtcaaca gcatagccta
     7081 atataccgac ccctgatggc atactactct tttccagctt agacaaatct tcaaatgtta
     7141 ctgtttgaaa atgtctaaat tttttcgggt ctgtttcact atctaacctt ccagtccata
     7201 aatttggttc accttgcttg tacacagcat ttccccctct tatttatgtg gcttattaac
     7261 aattaaagta taacgtatag gaaattttga attcaattca tagttaaatc cgtatcttaa
     7321 aaatacttat ctacattact tttaccccta ttttctatgt aataacgaat acttagctga
     7381 tttatgttaa taaaatacgt caagactatt acattttcat taatattgac atagacaatt
     7441 tatctctcgg cttgtaatat gtataattgt tactaaaaga tattttgctt gttacctaat
     7501 ggaggttaca tataatgaag aacaataaaa tttctggttt tcaatgggca atgacgattt
     7561 tcgtcttc
//
LOCUS       DALPQQ010000338         3720 bp    DNA     linear   BCT 22-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus strain K18-6-464
            SAMD00233528-rid16434743.guided.170, whole genome shotgun sequence.
ACCESSION   DALPQQ010000338 DALPQQ010000000
VERSION     DALPQQ010000338.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMD00233528
            Sequence Read Archive: DRR236061
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 3720)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3720)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001543423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001543423.1
            Genome Coverage       :: 77x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/22/2022 17:09:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,811
            CDSs (total)                      :: 2,743
            Genes (coding)                    :: 2,689
            CDSs (with protein)               :: 2,689
            Genes (RNA)                       :: 68
            rRNAs                             :: 2, 4, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 4, 2 (16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 54
            CDSs (without protein)            :: 54
            Pseudo Genes (ambiguous residues) :: 0 of 54
            Pseudo Genes (frameshifted)       :: 27 of 54
            Pseudo Genes (incomplete)         :: 27 of 54
            Pseudo Genes (internal stop)      :: 10 of 54
            Pseudo Genes (multiple problems)  :: 10 of 54
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3720
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMD00233528-rid16434743.guided.170"
                     /strain="K18-6-464"
                     /db_xref="taxon:1280"
                     /geo_loc_name="Japan: Niigata"
     gene            26..2035
                     /gene="mecA"
                     /locus_tag="O7798_002795"
     CDS             26..2035
                     /gene="mecA"
                     /locus_tag="O7798_002795"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001801873.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PBP2a family beta-lactam-resistant peptidoglycan
                     transpeptidase MecA"
                     /protein_id="HDC2864954.1"
                     /translation="MMKKIKIVPLILIVVVVGFGIYFYASKDKEINNTIDAIEDKNFK
                     QVYKDSSYISKSDNGEVEMTERPIKIYNSLGVKDINIQDRKIKKVSKNKKRVDAQYKI
                     KTNYGNIDRNVQFNFVKEDGMWKLDWDHSVIIPGMQKDQSIHIENLKSERGKILDRNN
                     VELANTGTAYEIGIVPKNVSKKDYKAIAKELSISEDYIKQQMDQNWVQDDTFVPLKTV
                     KKMDEYLSDFAKKFHLTTNETESRNYPLGKATSHLLGYVGPINSEELKQKEYKGYKDD
                     AVIGKKGLEKLYDKKLQHEDGYRVTIVDDNSNTIAHTLIEKKKKDGKDIQLTIDAKVQ
                     KSIYNNMKNDYGSGTAIHPQTGELLALVSTPSYDVYPFMYGMSNEEYNKLTEDKKEPL
                     LNKFQITTSPGSTQKILTAMIGLNNKTLDDKTSYKIDGKGWQKDKSWGGYNVTRYEVV
                     NGNIDLKQAIESSDNIFFARVALELGSKKFEKGMKKLGVGEDIPSDYPFYNAQISNKN
                     LDNEILLADSGYGQGEILINPVQILSIYSALENNGNINAPHLLKDTKNKVWKKNIISK
                     ENINLLTDGMQQVVNKTHKEDIYRSYANLIGKSGTAELKMKQGETGRQIGWFISYDKD
                     NPNMMMAINVKDVQDKGMASYNAKISGKVYDELYENGNKKYDIDE"
     gene            complement(2081..2509)
                     /locus_tag="O7798_002796"
     CDS             complement(2081..2509)
                     /locus_tag="O7798_002796"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000872606.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MaoC family dehydratase"
                     /protein_id="HDC2864955.1"
                     /translation="MKYDDFIVGETFKTKSLHITEEEIIQFATTFDPQYMHIDKEKAE
                     QSRFKGIIASGMHTLSISFKLWVEEGKYGEEVVAGTQMNNVKFIKPVYPGNTLYVIAE
                     ITNKKSIKKENGLVTVSLSTYNENEEIVFKGEVTALINNS"
     gene            complement(2606..3349)
                     /locus_tag="O7798_002797"
     CDS             complement(2606..3349)
                     /locus_tag="O7798_002797"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001830227.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycerophosphoryl diester phosphodiesterase"
                     /protein_id="HDC2864956.1"
                     /translation="MLTVYGHRGLPSKAPENTIASFKAASEVEGINWLELDVAITKDE
                     QLIIIHDDYLERTTNMSGEITELNYDEIKDASAGSWFGEKFKDEHLPTFDDVVKIANE
                     YNMNLNVELKGITGPNGLALSKSMVKQVEEQLTNLNQNQEVLISSFNVVLVKLAEEIM
                     PQYNRAVIFHTTSFREDWRTLLDYCNAKIVNTEDAKLTKAKVKMVKEAGYELNVWTVN
                     KPARANQLANWGVDGIFTDNADKMVHLSQ"
BASE COUNT         1339 a          588 c          567 g         1226 t
ORIGIN      
        1 aatgtagtct tatataagga gtatattgat gaaaaagata aaaattgttc cacttatttt
       61 aatagttgta gttgtcgggt ttggtatata tttttatgct tcaaaagata aagaaattaa
      121 taatactatt gatgcaattg aagataaaaa tttcaaacaa gtttataaag atagcagtta
      181 tatttctaaa agcgataatg gtgaagtaga aatgactgaa cgtccgataa aaatatataa
      241 tagtttaggc gttaaagata taaacattca ggatcgtaaa ataaaaaaag tatctaaaaa
      301 taaaaaacga gtagatgctc aatataaaat taaaacaaac tacggtaaca ttgatcgcaa
      361 cgttcaattt aattttgtta aagaagatgg tatgtggaag ttagattggg atcatagcgt
      421 cattattcca ggaatgcaga aagaccaaag catacatatt gaaaatttaa aatcagaacg
      481 tggtaaaatt ttagaccgaa acaatgtgga attggccaat acaggaacag catatgagat
      541 aggcatcgtt ccaaagaatg tatctaaaaa agattataaa gcaatcgcta aagaactaag
      601 tatttctgaa gactatatca aacaacaaat ggatcaaaat tgggtacaag atgatacctt
      661 cgttccactt aaaaccgtta aaaaaatgga tgaatattta agtgatttcg caaaaaaatt
      721 tcatcttaca actaatgaaa cagaaagtcg taactatcct ctaggaaaag cgacttcaca
      781 tctattaggt tatgttggtc ccattaactc tgaagaatta aaacaaaaag aatataaagg
      841 ctataaagat gatgcagtta ttggtaaaaa gggactcgaa aaactttacg ataaaaagct
      901 ccaacatgaa gatggctatc gtgtcacaat cgttgacgat aatagcaata caatcgcaca
      961 tacattaata gagaaaaaga aaaaagatgg caaagatatt caactaacta ttgatgctaa
     1021 agttcaaaag agtatttata acaacatgaa aaatgattat ggctcaggta ctgctatcca
     1081 ccctcaaaca ggtgaattat tagcacttgt aagcacacct tcatatgacg tctatccatt
     1141 tatgtatggc atgagtaacg aagaatataa taaattaacc gaagataaaa aagaacctct
     1201 gctcaacaag ttccagatta caacttcacc aggttcaact caaaaaatat taacagcaat
     1261 gattgggtta aataacaaaa cattagacga taaaacaagt tataaaatcg atggtaaagg
     1321 ttggcaaaaa gataaatctt ggggtggtta caacgttaca agatatgaag tggtaaatgg
     1381 taatatcgac ttaaaacaag caatagaatc atcagataac attttctttg ctagagtagc
     1441 actcgaatta ggcagtaaga aatttgaaaa aggcatgaaa aaactaggtg ttggtgaaga
     1501 tataccaagt gattatccat tttataatgc tcaaatttca aacaaaaatt tagataatga
     1561 aatattatta gctgattcag gttacggaca aggtgaaata ctgattaacc cagtacagat
     1621 cctttcaatc tatagcgcat tagaaaataa tggcaatatt aacgcacctc acttattaaa
     1681 agacacgaaa aacaaagttt ggaagaaaaa tattatttcc aaagaaaata tcaatctatt
     1741 aactgatggt atgcaacaag tcgtaaataa aacacataaa gaagatattt atagatctta
     1801 tgcaaactta attggcaaat ccggtactgc agaactcaaa atgaaacaag gagaaactgg
     1861 cagacaaatt gggtggttta tatcatatga taaagataat ccaaacatga tgatggctat
     1921 taatgttaaa gatgtacaag ataaaggaat ggctagctac aatgccaaaa tctcaggtaa
     1981 agtgtatgat gagctatatg agaacggtaa taaaaaatac gatatagatg aataacaaaa
     2041 cagtgaagca atccgtaacg atggttgctt cactgtttta ttatgaatta ttaataagtg
     2101 ctgttacttc tcccttaaat acaatttctt cattttcatt gtatgttgaa agtgacactg
     2161 taacgagtcc attttctttt tttatggatt tcttatttgt aatttcagcg ataacgtaca
     2221 atgtattacc tgggtataca ggtttaataa atttaacgtt attcatttgt gttcctgcta
     2281 caacttcttc tccgtattta ccttcttcta cccataattt aaatgatatt gaaagtgtat
     2341 gcatgccaga tgcaatgata cctttaaatc tactttgttc tgctttttct ttatctatat
     2401 gcatatattg aggatcaaaa gttgttgcaa attggataat ttcttcttct gtaatatgaa
     2461 ggctttttgt tttgaatgtt tctcctacta taaaatcatc gtatttcata tatgtctctc
     2521 tttcttattc aaattaattt tttagtatgt aacatgttaa aggtaagtct accgtcactg
     2581 aaacgtaaga ctcacctcta actttctatt gagacaaatg caccatttta tctgcattgt
     2641 ctgtaaagat accatcaact ccccaattag caagttggtt tgcacgtgct ggtttgttta
     2701 cagtccatac gttcaattca taacccgctt cttttaccat ttttactttt gctttagtaa
     2761 gtttggcatc ttcagtgttt actattttag cattacagta atctaaaagt gttctccagt
     2821 cttcacgaaa cgaagttgta tggaatataa ctgctctgtt atattgtggc atgatttctt
     2881 ctgcaagttt aacaagcaca acattaaagc ttgaaatgag cacttcttga ttctgattta
     2941 agtttgttaa ttgttcttcc acttgcttaa ccatactttt agaaagtgct agtccattcg
     3001 gtccagtaat accttttaat tctacattta aattcatatt atattcattt gctattttta
     3061 ctacatcatc gaaagttggc aaatgttcat ctttgaattt ttcaccaaac caagatcctg
     3121 cagaagcatc tttaatttca tcataattca attcagttat ttccccggac atatttgtag
     3181 tccgttctaa ataatcatca tgaatgataa tcagttgttc atcttttgta attgcaacat
     3241 ctaactccaa ccagtttata ccttctactt ctgaagcagc tttaaatgat gcaattgtat
     3301 tttccggagc tttactaggt aatcctctat gtccatatac agttagcata ttacctctcc
     3361 ttgcattttt atttttttaa ttaacgtaac tgtattatca cattaatcgc acttttattt
     3421 ccattaaaaa gagatgaata tcataaataa agaagtcgat agattcgtat tgattatgga
     3481 gttaatctac gtctcatctc atttttaaaa aatcatttat gtcccaagct ccattttgta
     3541 atcaagtcta gtttttctgt accccttatc tgcaatttta cttaggattg cttttaactt
     3601 accccttatc agcaatttta ctgagaactg cttttaacgc acctcttatc tgcaattttg
     3661 cctagaactg cttttaacgt acctcttatc tgcaatttta cttagaactg cttttaacaa
//
LOCUS       DALPQQ010000339         2502 bp    DNA     linear   BCT 22-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus strain K18-6-464
            SAMD00233528-rid16434743.guided.201, whole genome shotgun sequence.
ACCESSION   DALPQQ010000339 DALPQQ010000000
VERSION     DALPQQ010000339.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMD00233528
            Sequence Read Archive: DRR236061
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 2502)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2502)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001543423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001543423.1
            Genome Coverage       :: 77x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/22/2022 17:09:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,811
            CDSs (total)                      :: 2,743
            Genes (coding)                    :: 2,689
            CDSs (with protein)               :: 2,689
            Genes (RNA)                       :: 68
            rRNAs                             :: 2, 4, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 4, 2 (16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 54
            CDSs (without protein)            :: 54
            Pseudo Genes (ambiguous residues) :: 0 of 54
            Pseudo Genes (frameshifted)       :: 27 of 54
            Pseudo Genes (incomplete)         :: 27 of 54
            Pseudo Genes (internal stop)      :: 10 of 54
            Pseudo Genes (multiple problems)  :: 10 of 54
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2502
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMD00233528-rid16434743.guided.201"
                     /strain="K18-6-464"
                     /db_xref="taxon:1280"
                     /geo_loc_name="Japan: Niigata"
     gene            1..735
                     /gene="erm(C)"
                     /locus_tag="O7798_002798"
     CDS             1..735
                     /gene="erm(C)"
                     /locus_tag="O7798_002798"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011282421.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA (adenine(2058)-N(6))-methyltransferase
                     Erm(C)"
                     /protein_id="HDC2864957.1"
                     /translation="MNEKNIKHSQNFITSKHNIDKIMTNIRLNEHDNIFEIGSGKGHF
                     TLELVQRCNFVTAIEIDHKLCKTTENKLVDHDNFQVLNKDILQFKFPKNQSYKIFGNI
                     PYNISTDIIRKIVFDSIADEIYLIVEYGFAKRLLNTKRSLALFLMAEVDISILSMVPR
                     EYFHPKPKVNSSLIRLNRKKSRISHKDKQKYNYFVMKWVNKEYKKIFTKNQFNNSLKH
                     AGIDDLNNISFEQFLSLFNSYKLFNK"
     gene            1183..1659
                     /locus_tag="O7798_002799"
     CDS             1183..1659
                     /locus_tag="O7798_002799"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000664727.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="replication/maintenance protein RepL"
                     /protein_id="HDC2864958.1"
                     /translation="MKERYGTVYKGSQRLIDEESGEVIEVDKLYRKQTSGNFVKAYIV
                     QLISMLDMIGGKKLKIVNYILDNVHLSNNTMIATTREIAKATGTSLQTVITTLKILEE
                     GNIIKRKTGVLMLNPELLMRGDDQKQKYLLLEFGNFEQEANEKQENALSDYYSFKD"
     gene            2343..2402
                     /gene="ermCL"
                     /locus_tag="O7798_002800"
     CDS             2343..2402
                     /gene="ermCL"
                     /locus_tag="O7798_002800"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002497446.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA methylase leader peptide ErmCL"
                     /protein_id="HDC2864959.1"
                     /translation="MGIFSIFVISTVHYQPNKK"
BASE COUNT          977 a          376 c          391 g          758 t
ORIGIN      
        1 atgaacgaga aaaatataaa acacagtcaa aactttatta cttcaaaaca taatatagat
       61 aaaataatga caaatataag attaaatgaa catgataata tctttgaaat cggctcagga
      121 aaagggcatt ttacccttga attagtacag aggtgtaatt tcgtaactgc cattgaaata
      181 gaccataaat tatgcaaaac tacagaaaat aaacttgttg atcacgataa tttccaagtt
      241 ttaaacaagg atatattgca gtttaaattt cctaaaaacc aatcctataa aatatttggt
      301 aatatacctt ataacataag tacggatata atacgcaaaa ttgtttttga tagtatagct
      361 gatgagattt atttaatcgt ggaatacggg tttgctaaaa gattattaaa tacaaaacgc
      421 tcattggcat tatttttaat ggcagaagtt gatatttcta tattaagtat ggttccaaga
      481 gaatattttc atcctaaacc taaagtgaat agctcactta tcagattaaa tagaaaaaaa
      541 tcaagaatat cacacaaaga taaacagaag tataattatt tcgttatgaa atgggttaac
      601 aaagaataca agaaaatatt tacaaaaaat caatttaaca attccttaaa acatgcagga
      661 attgacgatt taaacaatat tagctttgaa caattcttat ctcttttcaa tagctataaa
      721 ttatttaata agtaagttaa gggatgcagt ttatgcatcc cttaacttgt ttttcgtgta
      781 cctatttttt gtgaatcgat tatgtctttt gcgcattcac ttcttttcta tataaatatg
      841 agcgaagcta ataagcgtcg gaaaagcagc aaaaagtttc ctttttgctg ttggagcatg
      901 ggggttcagg gggtgcagta tctgacgtca atgccgagcg aaagcgagcc gaagggtagc
      961 atttacgtta gataaccccc tgatatgctc cgacgcttta tatagaaaag aagattcaac
     1021 taggtaaaat cttaatatag gttgagatga taaggtttat aaggaatttg tttgttctaa
     1081 tttttcactc attttgttct aatttctttt aacaaatgtt cttttttttt tagaacagtt
     1141 atgatatagt tagaatagtt taaaataagg agtgagaaaa agatgaaaga aagatatgga
     1201 acagtctata aaggctctca gaggctcata gacgaagaaa gtggagaagt catagaggta
     1261 gacaagttat accgtaaaca aacgtctggt aacttcgtaa aggcatatat agtgcaatta
     1321 ataagtatgt tagatatgat tggcggaaaa aaacttaaaa tcgttaacta tatcctagat
     1381 aatgtccact taagtaacaa tacaatgata gctacaacaa gagaaatagc aaaagctaca
     1441 ggaacaagtc tacaaacagt aataacaaca cttaaaatct tagaagaagg aaatattata
     1501 aaaagaaaaa ctggagtatt aatgttaaac cctgaactac taatgagagg cgacgaccaa
     1561 aaacaaaaat acctcttact cgaatttggg aactttgagc aagaggcaaa tgaaaaacaa
     1621 gaaaatgcat tatctgatta ttattctttc aaggactagt ataacataaa atcgtctaca
     1681 aatagacaaa aaacctgcac gcttaatgta gatcaaaagc ttaacgcaaa tgaaatagat
     1741 tgacctccca ataacaccac gtagttattg ggaggtcaat ctatgaaatg cgattaagct
     1801 ttttctaatt cacataagcg tgcaggttta aagtacataa aaaatataat gaaaaaaagc
     1861 atcattatac taacgttata ccaacattat actaattgct tattccaatt tcctattggt
     1921 tggaaccaac aggcgttagt gtgttgttga gttggtactt tcatgggatt aatcccatga
     1981 aacccccaac caactcgcca aagctttggc taacacacac gccattccaa ccaatagttt
     2041 tctcggcata aagccatgct ctgacgctta aatgcactaa tgccttaaaa aaacattaaa
     2101 gtctaacaca ctagacttat ttacttcgta attaagtcgt taaaccgtgt gctctacgac
     2161 caaaagtata aaacctttaa gaactttctt ttttcttgta aaaaaagaaa ctagataaat
     2221 ctctcatatc ttttattcaa taatcgcatc agattgcagt ataaatttaa cgatcactca
     2281 tcatgttcat atttatcaga gctcgtgcta taattatact aattttataa ggaggaaaaa
     2341 atatgggcat ttttagtatt tttgtaatca gcacagttca ttatcaacca aacaaaaaat
     2401 aagtggttat aatgaatcgt taataagcaa aattcattat aaccaaatta aagagggtta
     2461 taatgaacga gaaaaatata aaacacagtc aaaactttat ta
//
LOCUS       DALPQQ010000340         2343 bp    DNA     linear   BCT 22-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus strain K18-6-464
            SAMD00233528-rid16434743.guided.210, whole genome shotgun sequence.
ACCESSION   DALPQQ010000340 DALPQQ010000000
VERSION     DALPQQ010000340.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMD00233528
            Sequence Read Archive: DRR236061
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 2343)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2343)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001543423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001543423.1
            Genome Coverage       :: 77x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/22/2022 17:09:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,811
            CDSs (total)                      :: 2,743
            Genes (coding)                    :: 2,689
            CDSs (with protein)               :: 2,689
            Genes (RNA)                       :: 68
            rRNAs                             :: 2, 4, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 4, 2 (16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 54
            CDSs (without protein)            :: 54
            Pseudo Genes (ambiguous residues) :: 0 of 54
            Pseudo Genes (frameshifted)       :: 27 of 54
            Pseudo Genes (incomplete)         :: 27 of 54
            Pseudo Genes (internal stop)      :: 10 of 54
            Pseudo Genes (multiple problems)  :: 10 of 54
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2343
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMD00233528-rid16434743.guided.210"
                     /strain="K18-6-464"
                     /db_xref="taxon:1280"
                     /geo_loc_name="Japan: Niigata"
     gene            136..843
                     /gene="deoD"
                     /locus_tag="O7798_002801"
     CDS             136..843
                     /gene="deoD"
                     /locus_tag="O7798_002801"
                     /EC_number="2.4.2.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498698.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="purine-nucleoside phosphorylase"
                     /protein_id="HDC2864960.1"
                     /translation="MKSTPHIKPMNDVEIAETVLLPGDPLRAKFIAETYLDDVEQFNT
                     VRNMFGFTGTYKGKKVSVMGSGMGMPSIGIYSYELIHTFGCKKLIRVGSCGAMQENID
                     LYDVIIAQGASTDSNYVQQYQLPGHFAPIASYQLLEKAVETARDKGVRHHVGNVLSSD
                     IFYNADTTASERWMRMGILGVEMESAALYMNAIYAGVEALGVFTVSDHLIHETSTTPE
                     ERERAFTDMIEIALSLV"
     gene            850..2202
                     /gene="tet(38)"
                     /locus_tag="O7798_002802"
     CDS             850..2202
                     /gene="tet(38)"
                     /locus_tag="O7798_002802"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001100300.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetracycline efflux MFS transporter Tet(38)"
                     /protein_id="HDC2864961.1"
                     /translation="MNVEYSKIKKAVPILLFLFVFSLVIDNSFKLISVAIADDLNISV
                     TTVSWQATLAGLVIGIGAVVYASLSDAISIRTLFIYGVILIIIGSIIGYIFQHQFPLL
                     LVGRIIQTAGLAAAETLYVIYVAKYLSKEDQKTYLGLSTSSYSLSLVIGTLSGGFIST
                     YLHWTNMFLIALIVVFTLPFLFKLLPKENNTNKAHLDFVGLILVATIATTVMLFITNF
                     NWLYMIGALIAIIVFALYIKNAQRPLVNKSFFQNKRYASFLFIVFVMYAIQLGYIFTF
                     PFIMEQIYHLQLDTTSLLLVPGYIVAVIVGALSGKIGEYLNSKQAIITAIILIALSLI
                     LPAFAVGNHISIFVISMIFFAGSFALMYAPLLNEAIKTIDLNMTGVAIGFYNLIINVA
                     VSVGIAIAAALIDFKALNFPGNDALSSHFGIILIILGLMSIVGLVLFVSLNRWTQSEK
                     "
BASE COUNT          747 a          345 c          429 g          822 t
ORIGIN      
        1 ggttagtagc tgtaactgta aaatgttctt aatattgtca aaatgtaatg cttgaaagcg
       61 cttttaaaaa atattattat atacatggtt agacaaatag acaaatcact atacaaatat
      121 tgggaggaat attttatgaa atcaacacca cacattaaac caatgaatga cgtcgaaatt
      181 gcagaaacgg ttctattgcc aggagatccg ttaagagcta agttcattgc agaaacttat
      241 ttggatgatg tggaacagtt caatacagtg cgaaacatgt ttggttttac cggaacatat
      301 aaaggtaaaa aagtttctgt catgggttca ggtatgggta tgccatctat tggcatttac
      361 tcttatgaat taattcatac atttggttgt aaaaaattaa ttcgcgttgg ctcttgtggc
      421 gcgatgcaag aaaacattga tttatatgat gtgattattg cacaaggtgc ctctactgat
      481 tcaaattacg ttcaacaata tcaattacca ggtcattttg cgccaattgc ttcttatcaa
      541 ttattagaaa aagcagttga aacagcacgt gacaaaggtg tacgtcatca tgtaggtaat
      601 gtgttatcaa gtgatatttt ctataacgcg gatacaacag cgagtgaacg ttggatgcgt
      661 atgggtattt taggtgtaga aatggaatca gctgcattat acatgaatgc aatttacgct
      721 ggtgtcgaag cattaggtgt gttcacagtg agcgatcatt taattcatga aacgtcaaca
      781 acacctgagg aaagggaacg tgcatttaca gatatgattg aaattgcact gtcattggtg
      841 tagatgatta tgaatgttga atattctaaa ataaagaaag cagtacctat tttattattc
      901 ttatttgtat tcagtttggt tatagacaac tcatttaaat tgatttctgt agccattgct
      961 gatgacttaa acatatctgt aacgacagta agttggcaag cgacattagc cggtttagta
     1021 attggtattg gcgctgtagt atacgcttca ttatctgatg ccattagtat acgcacacta
     1081 tttatttatg gcgtgatatt aatcattatc ggatcaatta ttggttacat tttccaacat
     1141 caattcccat tacttttagt tggacgtatt attcaaactg ccggtttagc tgctgcagag
     1201 acattatatg tgatatatgt tgcaaagtat ctttctaaag aggaccagaa gacttacctt
     1261 ggcttaagta cgagcagtta ttccttgtca ttagttatcg gtacattatc aggtggattt
     1321 atttctacgt atttacactg gacaaatatg tttttaattg cattaatcgt agtatttacg
     1381 ttgccattcc tatttaaatt attaccaaaa gaaaataata cgaataaagc tcatttagat
     1441 tttgttggct taattctagt ggcaactatt gctacaacag tcatgctgtt tattacgaac
     1501 tttaattggt tatatatgat tggtgcctta attgcgatta tcgtttttgc gctatatatt
     1561 aaaaatgcgc aacgtccatt agtaaataaa tcatttttcc aaaataaacg ttatgcttca
     1621 tttttattta tagtatttgt aatgtatgct atccaattgg gttatatttt tacgttccca
     1681 ttcataatgg agcaaattta tcatctgcaa ctagacacaa catcactgtt attagtaccg
     1741 ggttatatag tagcagtcat tgttggtgca ctaagtggta aaatcggcga atatctgaat
     1801 tcaaaacaag cgattatcac agcaattatt ttaatagcac tgagcttgat tttacctgca
     1861 tttgcagtag gtaatcacat ttcaatcttc gtcatttcta tgatattctt tgcaggtagc
     1921 tttgctttaa tgtatgcacc tttacttaac gaagccatta aaacaataga tcttaatatg
     1981 acaggtgtgg ctattggttt ttataattta attattaatg tggcggtatc tgtaggtatt
     2041 gcgattgctg cggctctaat cgattttaaa gcattaaatt tcccaggcaa tgatgcatta
     2101 agttcacatt tcggtattat tttaattatt ttaggtttaa tgagtattgt cggattagtt
     2161 ttattcgtca gcttaaatcg ttggacacaa tctgaaaaat aaatagatat aaattcgcga
     2221 gatatattcg tatttatagt aaaattaaat aaagagatta tataacacga ggagtagtaa
     2281 gtatgaaatt tgagaaatat atagatcaca ctttattgaa gcctgagtca acacgtacgc
     2341 aaa
//
LOCUS       DALPQQ010000341         1601 bp    DNA     linear   BCT 22-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus strain K18-6-464
            SAMD00233528-rid16434743.guided.235, whole genome shotgun sequence.
ACCESSION   DALPQQ010000341 DALPQQ010000000
VERSION     DALPQQ010000341.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMD00233528
            Sequence Read Archive: DRR236061
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 1601)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1601)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001543423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001543423.1
            Genome Coverage       :: 77x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/22/2022 17:09:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,811
            CDSs (total)                      :: 2,743
            Genes (coding)                    :: 2,689
            CDSs (with protein)               :: 2,689
            Genes (RNA)                       :: 68
            rRNAs                             :: 2, 4, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 4, 2 (16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 54
            CDSs (without protein)            :: 54
            Pseudo Genes (ambiguous residues) :: 0 of 54
            Pseudo Genes (frameshifted)       :: 27 of 54
            Pseudo Genes (incomplete)         :: 27 of 54
            Pseudo Genes (internal stop)      :: 10 of 54
            Pseudo Genes (multiple problems)  :: 10 of 54
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1601
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMD00233528-rid16434743.guided.235"
                     /strain="K18-6-464"
                     /db_xref="taxon:1280"
                     /geo_loc_name="Japan: Niigata"
     gene            44..1483
                     /locus_tag="O7798_002803"
                     /note="aph(2'')-Ia"
     CDS             44..1483
                     /locus_tag="O7798_002803"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002390775.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminoglycoside O-phosphotransferase APH(2'')-Ia"
                     /protein_id="HDC2864962.1"
                     /translation="MNIVENEICIRTLIDDDFPLMLKWLTDERVLEFYGGRDKKYTLE
                     SLKKHYTEPWEDEVFRVIIEYNNVPIGYGQIYKMYDELYTDYHYPKTDEIVYGMDQFI
                     GEPNYWSKGIGTRYIKLIFEFLKKERNANAVILDPHKNNPRAIRAYQKSGFRIIEDLP
                     EHELHEGKKEDCYLMEYRYDDNATNVKAMKYLIEHYFDNFKVDSIEIIGSGYDSVAYL
                     VNNEYIFKTKFSTNKKKGYAKEKAIYNFLNTNLETNVKIPNIEYSYISDELSILGYKE
                     IKGTFLTPEIYSTMSEEEQNLLKRDIASFLRQMHGLDYTDISECTIDNKQNVLEEYIL
                     LRETIYNDLTDIEKDYIESFMERLNATTVFEGKKCLCHNDFSCNHLLLDGNNRLTGII
                     DFGDSGIIDEYCDFIYLLEDSEEEIGTNFGEDILRMYGNIDIEKAKEYQDIVEEYYPI
                     ETIVYGIKNIKQEFIENGRKEIYKRTYKD"
BASE COUNT          684 a          116 c          275 g          526 t
ORIGIN      
        1 tgaaatagta tatgtatatg gttatgaaaa aggtgataaa taaatgaata tagttgaaaa
       61 tgaaatatgt ataagaactt taatagatga tgattttcct ttgatgttaa aatggttaac
      121 tgatgaaaga gtattagaat tttatggtgg tagagataaa aaatatacat tagaatcatt
      181 aaaaaaacat tatacagagc cttgggaaga tgaagttttt agagtaatta ttgaatataa
      241 caatgttcct attggatatg gacaaatata taaaatgtat gatgagttat atactgatta
      301 tcattatcca aaaactgatg agatagtcta tggtatggat caatttatag gagagccaaa
      361 ttattggagt aaaggaattg gtacaagata tattaaattg atttttgaat ttttgaaaaa
      421 agaaagaaat gctaatgcag ttattttaga ccctcataaa aataatccaa gagcaataag
      481 ggcataccaa aaatctggtt ttagaattat tgaagatttg ccagaacatg aattacacga
      541 gggcaaaaaa gaagattgtt atttaatgga atatagatat gatgataatg ccacaaatgt
      601 taaggcaatg aaatatttaa ttgagcatta ctttgataat ttcaaagtag atagtattga
      661 aataatcggt agtggttatg atagtgtggc atatttagtt aataatgaat acatttttaa
      721 aacaaaattt agtactaata agaaaaaagg ttatgcaaaa gaaaaagcaa tatataattt
      781 tttaaataca aatttagaaa ctaatgtaaa aattcctaat attgaatatt cgtatattag
      841 tgatgaatta tctatactag gttataaaga aattaaagga acttttttaa caccagaaat
      901 ttattctact atgtcagaag aagaacaaaa tttgttaaaa cgagatattg ccagtttttt
      961 aagacaaatg cacggtttag attatacaga tattagtgaa tgtactattg ataataaaca
     1021 aaatgtatta gaagagtata tattgttgcg tgaaactatt tataatgatt taactgatat
     1081 agaaaaagat tatatagaaa gttttatgga aagactaaat gcaacaacag tttttgaggg
     1141 taaaaagtgt ttatgccata atgattttag ttgtaatcat ctattgttag atggcaataa
     1201 tagattaact ggaataattg attttggaga ttctggaatt atagatgaat attgtgattt
     1261 tatatactta cttgaagata gtgaagaaga aataggaaca aattttggag aagatatatt
     1321 aagaatgtat ggaaatatag atattgagaa agcaaaagaa tatcaagata tagttgaaga
     1381 atattatcct attgaaacta ttgtttatgg aattaaaaat attaaacagg aatttatcga
     1441 aaatggtaga aaagaaattt ataaaaggac ttataaagat tgattatata atatatgaaa
     1501 agctattata aaagacatta gtattaaata gtttaaaaaa atgaaaaata ataaaggaag
     1561 tgagtcaagt ccagactcct gtgtaaaatg ctatacaatg t
//
LOCUS       DALPQQ010000342         1555 bp    DNA     linear   BCT 22-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus strain K18-6-464
            SAMD00233528-rid16434743.guided.236, whole genome shotgun sequence.
ACCESSION   DALPQQ010000342 DALPQQ010000000
VERSION     DALPQQ010000342.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMD00233528
            Sequence Read Archive: DRR236061
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 1555)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1555)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001543423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001543423.1
            Genome Coverage       :: 77x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/22/2022 17:09:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,811
            CDSs (total)                      :: 2,743
            Genes (coding)                    :: 2,689
            CDSs (with protein)               :: 2,689
            Genes (RNA)                       :: 68
            rRNAs                             :: 2, 4, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 4, 2 (16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 54
            CDSs (without protein)            :: 54
            Pseudo Genes (ambiguous residues) :: 0 of 54
            Pseudo Genes (frameshifted)       :: 27 of 54
            Pseudo Genes (incomplete)         :: 27 of 54
            Pseudo Genes (internal stop)      :: 10 of 54
            Pseudo Genes (multiple problems)  :: 10 of 54
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1555
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMD00233528-rid16434743.guided.236"
                     /strain="K18-6-464"
                     /db_xref="taxon:1280"
                     /geo_loc_name="Japan: Niigata"
     gene            93..1079
                     /locus_tag="O7798_002804"
     CDS             93..1079
                     /locus_tag="O7798_002804"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001549960.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="beta-lactam sensor/signal transducer MecR1"
                     /protein_id="HDC2864963.1"
                     /translation="MLSSFLMLSIISSLLTICVIFLVRMLYIKYTQNIMSHKIWLLVL
                     VSTLIPLIPFYKISNFTFSKDMMNRNVSDTTSSVSHMLDGQQSSVTKDLAINVNQFET
                     SNITYMILLIWVFGSLLCLFYMIKAFRQIDVIKSSSLESSYLNERLKVCQSKMQFYKK
                     HITISYSSNIDNPMVFGLVKSQIVLPTVVVETMNDKEIEYIILHELSHVKSHDLIFNQ
                     LYVVFKMIFWFNPALYISKTMMDNDCEKVCDRNVLKILNRHEHIRYGESILKCSILKS
                     QHINNVAAQYLLGFNSNIKERVKYIALYDSMPKPNRNKRIVAYIVCSISSFT"
     gene            1051..1311
                     /locus_tag="O7798_002805"
     CDS             1051..1311
                     /locus_tag="O7798_002805"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001549961.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3387 domain-containing protein"
                     /protein_id="HDC2864964.1"
                     /translation="MYVVYRASHETAKEALGDKELRAIAHELTKTVKDNMSVDWSKRD
                     SAKAKMRVQVRRLLKKYGYPPDLQKMAVEQVVEQAELMASQQ"
     gene            complement(1302..>1555)
                     /locus_tag="O7798_002806"
     CDS             complement(1302..>1555)
                     /locus_tag="O7798_002806"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011274780.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="IS5/IS1182 family transposase"
                     /protein_id="HDC2864965.1"
                     /translation="VFGFMKAILGFTRMSVRGLNKVKRELGFVLMALNIRKVVAQRAE
                     NNQKIYKKDNFYIISIEIVFFHLSKNFMSRTHYDLFFYC"
BASE COUNT          558 a          215 c          256 g          526 t
ORIGIN      
        1 ctccttatat aagactacat ttgtagtata ttacaaatgt agtatttatg tcaaaataat
       61 gttataattt ttgtgatatg gaggtgtaga aggtgttatc atctttttta atgttaagta
      121 taatcagttc attgctcacg atatgtgtaa tttttttagt gagaatgctc tatataaaat
      181 atactcaaaa tattatgtca cataagattt ggttattagt gctcgtctcc acgttaattc
      241 cattaatacc attttacaaa atatcgaatt ttacattttc aaaagatatg atgaatcgaa
      301 atgtatctga cacgacttct tcggttagtc atatgttaga tggtcaacaa tcatctgtta
      361 cgaaagactt agcaattaat gttaatcagt ttgagacctc aaatataacg tatatgattc
      421 ttttgatatg ggtatttggt agtttgttgt gcttatttta tatgattaag gcattccgac
      481 aaattgatgt tattaaaagt tcgtcattgg aatcgtcata tcttaatgaa cgacttaaag
      541 tatgtcaaag taagatgcag ttctacaaaa agcatataac aattagttat agttcaaaca
      601 ttgataatcc gatggtattt ggtttagtga aatcccaaat tgtactacca actgtcgtag
      661 tcgaaaccat gaatgacaaa gaaattgaat atattattct acatgaacta tcacatgtga
      721 aaagtcatga cttaatattc aaccagcttt atgttgtttt taaaatgata ttctggttta
      781 atcctgcact atatataagt aaaacaatga tggacaatga ctgtgaaaaa gtatgtgata
      841 gaaacgtttt aaaaattttg aatcgccatg aacatatacg ttatggtgaa tcgatattaa
      901 aatgctctat tttaaaatct cagcacataa ataatgtggc agcacaatat ttactaggtt
      961 ttaattcaaa tattaaagaa cgtgttaagt atattgcact ttatgattca atgcctaaac
     1021 ctaatcgaaa caagcgtatt gttgcgtata ttgtatgtag tatatcgagc ttcacatgaa
     1081 acagctaaag aagctttggg cgataaagag ttaagagcca ttgcacatga gttaactaaa
     1141 acagttaagg ataacatgag tgttgattgg tctaaacgag acagtgctaa agctaaaatg
     1201 agagttcaag ttagacgcct attaaagaaa tatggctatc caccagatct tcaaaaaatg
     1261 gctgtggaac aagttgtaga gcaagcagaa ttaatggcaa gtcagcaata aaaaaataaa
     1321 tcataatgag tccgggacat aaagttcttg gataagtgaa aaaagacaat ttctattgaa
     1381 ataatataga aattgtcttt tttataaatt ttttgattat tttcagctcg ttgagctact
     1441 acttttctta tattaagtgc cattaataca aaaccaagtt ctcttttgac tttattgagt
     1501 cctcggacag acatccgagt gaaacccaaa atagccttca taaatccaaa aacag
//
LOCUS       DALPQQ010000343         1495 bp    DNA     linear   BCT 22-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus strain K18-6-464
            SAMD00233528-rid16434743.guided.243, whole genome shotgun sequence.
ACCESSION   DALPQQ010000343 DALPQQ010000000
VERSION     DALPQQ010000343.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMD00233528
            Sequence Read Archive: DRR236061
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 1495)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1495)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001543423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001543423.1
            Genome Coverage       :: 77x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/22/2022 17:09:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,811
            CDSs (total)                      :: 2,743
            Genes (coding)                    :: 2,689
            CDSs (with protein)               :: 2,689
            Genes (RNA)                       :: 68
            rRNAs                             :: 2, 4, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 4, 2 (16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 54
            CDSs (without protein)            :: 54
            Pseudo Genes (ambiguous residues) :: 0 of 54
            Pseudo Genes (frameshifted)       :: 27 of 54
            Pseudo Genes (incomplete)         :: 27 of 54
            Pseudo Genes (internal stop)      :: 10 of 54
            Pseudo Genes (multiple problems)  :: 10 of 54
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1495
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMD00233528-rid16434743.guided.243"
                     /strain="K18-6-464"
                     /db_xref="taxon:1280"
                     /geo_loc_name="Japan: Niigata"
     gene            <1..646
                     /locus_tag="O7798_002807"
     CDS             <1..646
                     /locus_tag="O7798_002807"
                     /EC_number="2.1.1.45"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499960.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="thymidylate synthase"
                     /protein_id="HDC2864966.1"
                     /translation="TDFGHRALSDPEFNEQYKEQMKQFKQRILEDDTFAKQFGDLGNV
                     YGKQWRDWVDKDGNHFDQLKTVIEQIKHNPDSRRHIVSAWNPTEIDTMALPPCHTMFQ
                     FYVQDGKLSCQLYQRSADIFLGVPFNIASYALLTHLIAKECGLEVGEFVHTFGDAHIY
                     SNHIDAIQTQLARESFNPPTLKINSDKSIFDINYEDLEIVDYESHPAIKAPIAV"
     gene            846..1325
                     /locus_tag="O7798_002808"
     CDS             846..1325
                     /locus_tag="O7798_002808"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001830952.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydrofolate reductase"
                     /protein_id="HDC2864967.1"
                     /translation="MTLSILVAHDLQRVIGFENQLPWHLPNDLKHVKKLSTGHTLVMG
                     RKTFESIGKPLPNRRNVVLTSDTSFNVEGVDVIHSIEDIYQLPGHVFIFGGQTLFEEM
                     IDKVDDMYITVIEGKFRGDTFFPPYTFEDWEVASSVEGKLDEKNTIPHTFLHLIRKK"
     gene            1340..>1495
                     /locus_tag="O7798_002809"
     CDS             1340..>1495
                     /locus_tag="O7798_002809"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499958.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DegV family protein"
                     /protein_id="HDC2864968.1"
                     /translation="MTKQIIVTDSTSDLSKEYLEANNIHVIPLSLTIEGASYVDQVDI
                     TSEEFINH"
BASE COUNT          537 a          236 c          262 g          460 t
ORIGIN      
        1 gacagatttc gggcatcgtg cattgagtga tcctgaattt aacgaacaat ataaagaaca
       61 aatgaaacaa tttaagcaac gtattcttga agatgataca tttgcgaagc aattcgggga
      121 tttaggaaat gtttatggta aacaatggcg agattgggtt gataaagatg gtaatcattt
      181 tgatcaactt aaaacagtaa ttgaacaaat taagcataat ccagattcaa ggcgacacat
      241 cgtatctgca tggaatccaa cagaaattga tacaatggca cttccgcctt gtcataccat
      301 gttccagttt tatgtccaag atggtaagtt aagttgccag ttataccaac gtagcgcaga
      361 tatcttttta ggtgtgccat ttaatatcgc aagctacgct ttattgacac accttattgc
      421 caaagaatgt ggacttgaag tgggtgaatt tgtgcataca tttggagatg cacatattta
      481 ttcaaatcat attgatgcga ttcaaacaca attagcacgt gaaagcttca atcctccaac
      541 attaaaaatt aacagtgaca agtctatttt cgacataaat tatgaagatt tggaaattgt
      601 tgactatgaa tcacatccag caataaaagc tccaatagca gtgtagtcat tgcatagtta
      661 gctaaccata tagacatcaa aatgacatca tagtattttc aagtgcaaaa aagtactttt
      721 ttgtgttaaa cgttttcata aattatgcaa aatcattatt tctatcacac tttatgataa
      781 aaattgtgtt aaattaaaga taacttagta ataaaaaatg aaatgataga agaaggagga
      841 taattatgac tttatccatt ctagttgcac atgacttgca acgagtaatt ggttttgaaa
      901 atcaattacc ttggcaccta ccaaatgatt tgaagcatgt taaaaaatta tcaacaggtc
      961 atactttagt aatgggtcgt aagacatttg aatcgattgg taaaccacta ccgaatcgtc
     1021 gaaatgttgt acttacttca gatacaagtt tcaacgtaga gggcgttgat gtaattcact
     1081 ctattgaaga tatttaccaa ctaccgggcc atgttttcat atttggaggg caaacattat
     1141 ttgaagaaat gattgataaa gtggacgaca tgtatattac tgttattgaa ggtaaattcc
     1201 gtggtgatac gttctttcca ccttatacat ttgaagactg ggaagttgcc tcttcagttg
     1261 aaggtaaact agatgagaaa aatacaattc cacatacctt tctacattta attcgtaaaa
     1321 aataaggggg aaaacgacca tgacaaaaca gattatagta acagactcaa catccgattt
     1381 atctaaagaa tacttagaag caaacaacat tcatgtaatt cctttaagtt taactattga
     1441 aggagcttca tacgttgacc aagtagatat tacatcagaa gaatttatta atcat
//
LOCUS       DALPQQ010000344         1314 bp    DNA     linear   BCT 22-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus strain K18-6-464
            SAMD00233528-rid16434743.guided.255, whole genome shotgun sequence.
ACCESSION   DALPQQ010000344 DALPQQ010000000
VERSION     DALPQQ010000344.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMD00233528
            Sequence Read Archive: DRR236061
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 1314)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1314)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001543423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001543423.1
            Genome Coverage       :: 77x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/22/2022 17:09:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,811
            CDSs (total)                      :: 2,743
            Genes (coding)                    :: 2,689
            CDSs (with protein)               :: 2,689
            Genes (RNA)                       :: 68
            rRNAs                             :: 2, 4, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 4, 2 (16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 54
            CDSs (without protein)            :: 54
            Pseudo Genes (ambiguous residues) :: 0 of 54
            Pseudo Genes (frameshifted)       :: 27 of 54
            Pseudo Genes (incomplete)         :: 27 of 54
            Pseudo Genes (internal stop)      :: 10 of 54
            Pseudo Genes (multiple problems)  :: 10 of 54
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1314
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMD00233528-rid16434743.guided.255"
                     /strain="K18-6-464"
                     /db_xref="taxon:1280"
                     /geo_loc_name="Japan: Niigata"
     gene            <1..1226
                     /locus_tag="O7798_002810"
     CDS             <1..1226
                     /locus_tag="O7798_002810"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001096376.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="beta-lactam sensor/signal transducer BlaR1"
                     /protein_id="HDC2864969.1"
                     /translation="IILIPSLYFKSINDKKLKYIILHEYAHAKNRDTLHLIIFNIFSI
                     AMSYNPLIQIVKRKMIHDNEVEADRFVLNNINKNEFKSYAEAIMDSVLKTPFFNKNIL
                     SHSFNGKKSLLKRRLINIKEANLKKQSKLILIFICIFTFFIMIIQSQFLMGQSLTDYN
                     YKKPLQSDYQILDESKNFGSNSGSFVMYSMKKDKYYIYNEKESRKRYSPDSTYKIYLA
                     LFGLDRHIISDKNSRMSWNHNHYPFDSWNKDQDLNTAIQNSVNWYFERISNQISKNYT
                     SDQLKQLNYGNKNLGSYKAYWLEDSLKISNLEQVIVLKNMMEQNNHFSKNEKKQLSSS
                     LLIRKNENYELYGKTGTGIVNGKYNNGWFVGYVITNHDKYYFSTHLSDEKASGENAKL
                     INEKILKEMGVLNGQ"
     gene            1216..>1314
                     /locus_tag="O7798_002811"
     CDS             1216..>1314
                     /locus_tag="O7798_002811"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001284656.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BlaI/MecI/CopY family transcriptional regulator"
                     /protein_id="HDC2864970.1"
                     /translation="MANKQVEISMAEWDVMNIIWNKKSVSANEIVVE"
BASE COUNT          537 a          146 c          196 g          435 t
ORIGIN      
        1 atattatttt gattcccagt ttatatttta aaagtataaa tgacaaaaaa ctaaaatata
       61 taatattgca cgagtatgct catgctaaaa acagagatac tttgcattta attatcttta
      121 atattttttc tattgctatg agttataatc cactaataca aattgtaaaa agaaagatga
      181 ttcatgacaa tgaagtagaa gccgatagat ttgtccttaa taatattaac aaaaatgaat
      241 ttaagtctta tgcggaagct attatggatt ccgtactaaa aaccccattt ttcaacaaaa
      301 atatattaag ccattcattt aatggtaaaa aatcattact caaaagaaga ttaattaata
      361 taaaagaagc caatttgaaa aagcagtcaa aattaattct aatttttatt tgtattttta
      421 ctttttttat catgataatt caaagccagt ttttaatggg gcaatcctta actgattata
      481 attataaaaa gcccttgcaa agcgattacc aaattttaga tgaaagtaaa aattttggtt
      541 caaatagtgg atctttcgtt atgtacagca tgaagaaaga caaatactat atttataatg
      601 aaaaagaaag tagaaaaaga tattctcctg attcaactta caaaatttat ttagcactgt
      661 ttggacttga ccgtcatatt ataagtgata aaaattcacg tatgtcatgg aatcataatc
      721 attatccttt cgattcttgg aataaggatc aagatttaaa tacggcaata caaaactcag
      781 ttaattggta cttcgaacgt attagtaatc aaatatcaaa gaactatact tctgatcaac
      841 tcaagcaatt aaattatggt aataaaaatt tgggaagtta taaagcctat tggttggaag
      901 atagtttgaa aatatctaat cttgaacaag taatagtttt gaaaaatatg atggaacaaa
      961 ataatcattt tagtaaaaat gaaaagaaac aattatcttc ttcgttattg attagaaaaa
     1021 atgaaaatta tgaattgtat gggaaaacag gtacaggtat agtaaacggg aagtacaata
     1081 atgggtggtt tgtaggttac gtaattacaa atcatgataa gtattatttt tctacacatt
     1141 tatcagatga aaaagcctct ggtgaaaatg ctaaattaat aaatgaaaaa atattaaaag
     1201 aaatgggtgt tttaaatggc caataagcaa gttgaaatat ctatggctga atgggatgtt
     1261 atgaatataa tatggaataa aaaatcagta tcagctaatg aaattgtagt tgag
//
